Query psy11349
Match_columns 360
No_of_seqs 362 out of 2703
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 16:07:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11349.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11349hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zs7_A Pyridoxal kinase; trans 100.0 1.7E-39 5.9E-44 305.5 24.4 251 88-345 3-266 (300)
2 3pzs_A PM kinase, pyridoxamine 100.0 3.5E-36 1.2E-40 281.7 25.9 254 88-346 4-265 (289)
3 3mbh_A Putative phosphomethylp 100.0 7.9E-35 2.7E-39 272.7 20.0 248 87-345 6-263 (291)
4 3h74_A Pyridoxal kinase; PSI-I 100.0 4.2E-33 1.4E-37 259.8 22.7 245 88-346 3-254 (282)
5 3rm5_A Hydroxymethylpyrimidine 100.0 1.7E-32 5.7E-37 277.6 22.7 263 84-360 18-295 (550)
6 2ddm_A Pyridoxine kinase; pyri 100.0 2.1E-29 7.1E-34 234.7 26.9 257 87-358 14-280 (283)
7 2yxt_A Pyridoxal kinase; beta 100.0 1.2E-28 4.1E-33 232.7 27.2 251 88-345 4-274 (312)
8 2i5b_A Phosphomethylpyrimidine 100.0 3.2E-28 1.1E-32 225.2 20.2 247 88-358 3-263 (271)
9 1ub0_A THID, phosphomethylpyri 100.0 5E-28 1.7E-32 222.2 19.8 246 89-358 2-257 (258)
10 1jxh_A Phosphomethylpyrimidine 99.9 5.6E-27 1.9E-31 219.0 17.8 248 88-359 25-285 (288)
11 4du5_A PFKB; structural genomi 99.9 6.9E-21 2.3E-25 181.4 18.7 162 159-340 152-318 (336)
12 2abq_A Fructose 1-phosphate ki 99.9 2.8E-20 9.7E-25 174.6 22.1 176 136-340 104-282 (306)
13 1rkd_A Ribokinase; carbohydrat 99.9 2.5E-20 8.7E-25 175.1 21.7 169 139-340 119-288 (309)
14 3lhx_A Ketodeoxygluconokinase; 99.9 5.1E-21 1.8E-25 180.8 16.6 176 140-340 115-299 (319)
15 2fv7_A Ribokinase; structural 99.9 2.3E-20 7.9E-25 177.3 21.2 234 63-340 61-313 (331)
16 3umo_A 6-phosphofructokinase i 99.9 1.9E-20 6.5E-25 175.9 19.8 175 136-339 109-288 (309)
17 4e69_A 2-dehydro-3-deoxyglucon 99.9 3.1E-20 1.1E-24 176.3 21.1 162 159-340 145-312 (328)
18 2jg1_A Tagatose-6-phosphate ki 99.8 2.8E-20 9.5E-25 176.7 19.3 176 137-340 126-307 (330)
19 3ktn_A Carbohydrate kinase, PF 99.8 1.6E-20 5.6E-25 179.2 17.5 165 159-339 129-312 (346)
20 3kzh_A Probable sugar kinase; 99.8 3.2E-20 1.1E-24 176.1 18.7 169 139-340 121-290 (328)
21 2jg5_A Fructose 1-phosphate ki 99.8 3.7E-20 1.3E-24 173.7 18.3 176 136-340 104-282 (306)
22 3ljs_A Fructokinase; fructokia 99.8 1.1E-20 3.8E-25 179.9 13.4 163 159-340 129-309 (338)
23 3ry7_A Ribokinase; transferase 99.8 6.9E-20 2.4E-24 171.6 18.6 169 138-339 117-287 (304)
24 3iq0_A Putative ribokinase II; 99.8 2.7E-20 9.4E-25 176.7 15.6 160 159-339 130-292 (330)
25 4e84_A D-beta-D-heptose 7-phos 99.8 2.4E-19 8.1E-24 172.0 22.0 150 159-339 186-338 (352)
26 3cqd_A 6-phosphofructokinase i 99.8 1.4E-19 4.7E-24 170.1 19.9 176 137-340 110-289 (309)
27 2f02_A Tagatose-6-phosphate ki 99.8 1E-19 3.5E-24 172.2 17.1 176 137-340 108-290 (323)
28 2qhp_A Fructokinase; NP_810670 99.8 3.9E-20 1.3E-24 172.6 13.7 162 159-340 114-280 (296)
29 3vas_A Putative adenosine kina 99.8 7.1E-20 2.4E-24 176.7 15.4 180 138-340 160-353 (370)
30 2r3b_A YJEF-related protein; p 99.8 1.7E-20 5.9E-25 176.3 10.7 224 74-340 30-267 (310)
31 3ie7_A LIN2199 protein; phosph 99.8 2.4E-19 8.1E-24 169.3 17.7 172 136-340 111-286 (320)
32 3pl2_A Sugar kinase, ribokinas 99.8 5.9E-19 2E-23 166.5 18.3 159 159-339 135-297 (319)
33 3bgk_A SMU.573, putative uncha 99.8 1.4E-19 4.7E-24 170.2 13.6 227 75-340 45-284 (311)
34 3otx_A Adenosine kinase, putat 99.8 1.9E-19 6.4E-24 172.0 14.1 177 139-340 145-334 (347)
35 3loo_A Anopheles gambiae adeno 99.8 3.2E-19 1.1E-23 171.8 15.7 165 159-341 176-351 (365)
36 2ajr_A Sugar kinase, PFKB fami 99.8 7.3E-19 2.5E-23 167.0 17.4 174 137-339 125-306 (331)
37 2afb_A 2-keto-3-deoxygluconate 99.8 3.3E-19 1.1E-23 170.6 14.6 166 159-340 138-325 (351)
38 2qcv_A Putative 5-dehydro-2-de 99.8 3.1E-19 1.1E-23 169.3 14.1 166 159-340 138-306 (332)
39 2nwh_A AGR_C_3442P, carbohydra 99.8 4E-19 1.4E-23 167.7 13.0 168 139-340 117-288 (317)
40 2v78_A Fructokinase; transfera 99.8 3.5E-18 1.2E-22 160.8 17.2 157 159-340 128-291 (313)
41 1tyy_A Putative sugar kinase; 99.8 2.7E-19 9.2E-24 170.6 9.2 162 158-340 140-310 (339)
42 3h49_A Ribokinase; transferase 99.8 6E-18 2.1E-22 160.2 18.4 156 159-339 135-294 (325)
43 4e3a_A Sugar kinase protein; s 99.8 2.7E-18 9.3E-23 164.5 15.2 156 159-339 171-332 (352)
44 2abs_A Adenosine kinase, AK; r 99.8 4.8E-18 1.6E-22 164.6 15.8 165 159-340 180-371 (383)
45 3hj6_A Fructokinase, FRK; fruc 99.8 1.7E-19 5.8E-24 171.0 5.1 161 159-340 144-308 (327)
46 1vm7_A Ribokinase; TM0960, str 99.8 2.2E-18 7.4E-23 162.4 12.4 151 159-340 140-291 (311)
47 1v1a_A 2-keto-3-deoxygluconate 99.8 4.4E-18 1.5E-22 159.8 14.5 156 159-340 125-284 (309)
48 1bx4_A Protein (adenosine kina 99.8 9.3E-19 3.2E-23 167.0 9.8 161 159-339 161-332 (345)
49 2dcn_A Hypothetical fructokina 99.8 6.8E-18 2.3E-22 158.6 14.8 156 159-340 128-289 (311)
50 2rbc_A Sugar kinase, AGR_C_456 99.7 9.9E-18 3.4E-22 160.0 14.7 148 159-340 157-309 (343)
51 3rss_A Putative uncharacterize 99.7 5.8E-18 2E-22 168.5 12.7 245 49-333 205-469 (502)
52 3rpz_A ADP/ATP-dependent NAD(P 99.7 7.3E-18 2.5E-22 155.8 12.4 228 74-337 16-248 (279)
53 3uq6_A Adenosine kinase, putat 99.7 1.6E-17 5.6E-22 160.2 15.3 180 138-340 162-355 (372)
54 3ikh_A Carbohydrate kinase; tr 99.7 2.1E-17 7.2E-22 154.6 14.8 151 139-340 116-269 (299)
55 4gm6_A PFKB family carbohydrat 99.7 1.1E-16 3.7E-21 153.0 16.7 165 159-338 150-324 (351)
56 3kd6_A Carbohydrate kinase, PF 99.7 1.2E-17 4.3E-22 157.2 9.9 152 159-340 119-277 (313)
57 1vk4_A PFKB carbohydrate kinas 99.7 4.5E-16 1.5E-20 145.5 20.0 158 159-340 119-280 (298)
58 1ekq_A Hydroxyethylthiazole ki 99.7 6.7E-17 2.3E-21 149.4 14.1 164 160-344 59-235 (272)
59 2pkf_A Adenosine kinase; trans 99.7 1.6E-16 5.3E-21 151.1 16.6 150 159-340 148-300 (334)
60 3ewm_A Uncharacterized sugar k 99.7 2.7E-16 9.2E-21 147.9 17.1 150 160-339 125-281 (313)
61 2hlz_A Ketohexokinase; non-pro 99.7 8.2E-16 2.8E-20 144.7 18.4 163 138-339 132-304 (312)
62 2c4e_A Sugar kinase MJ0406; tr 99.7 1.6E-16 5.5E-21 148.7 11.0 149 159-340 130-280 (302)
63 3b1n_A Ribokinase, putative; r 99.7 6.2E-16 2.1E-20 146.5 14.2 149 159-339 135-285 (326)
64 3dzv_A 4-methyl-5-(beta-hydrox 99.7 3.3E-15 1.1E-19 137.4 17.3 168 159-346 58-242 (273)
65 1v8a_A Hydroxyethylthiazole ki 99.6 4.7E-16 1.6E-20 143.1 10.7 164 159-344 56-231 (265)
66 3go6_A Ribokinase RBSK; phosph 99.6 1.5E-15 5E-20 142.9 10.5 138 159-339 143-284 (310)
67 3bf5_A Ribokinase related prot 99.5 1.4E-14 4.9E-19 135.9 9.3 139 159-340 140-279 (306)
68 3k5w_A Carbohydrate kinase; 11 99.5 4.6E-15 1.6E-19 146.4 6.1 233 49-338 197-445 (475)
69 3hpd_A Hydroxyethylthiazole ki 99.5 8.7E-13 3E-17 120.3 14.2 167 160-348 57-235 (265)
70 3nl6_A Thiamine biosynthetic b 99.4 2.7E-12 9.1E-17 128.7 16.3 170 160-346 307-508 (540)
71 3drw_A ADP-specific phosphofru 95.5 0.13 4.6E-06 50.1 12.3 110 143-264 224-356 (474)
72 3zs7_A Pyridoxal kinase; trans 94.8 0.045 1.5E-06 50.4 6.5 63 13-76 177-239 (300)
73 3mbh_A Putative phosphomethylp 85.4 0.99 3.4E-05 41.0 5.3 61 13-78 177-237 (291)
74 3pzs_A PM kinase, pyridoxamine 73.5 3.8 0.00013 36.9 5.0 58 14-78 177-238 (289)
75 3h74_A Pyridoxal kinase; PSI-I 71.2 5.2 0.00018 36.0 5.4 57 13-78 170-227 (282)
76 1l2l_A ADP-dependent glucokina 66.7 62 0.0021 31.2 12.1 106 142-260 215-340 (457)
77 1ua4_A Glucokinase, ADP-depend 61.3 23 0.0008 34.1 8.0 107 143-262 213-339 (455)
78 2ddm_A Pyridoxine kinase; pyri 56.9 18 0.0006 32.0 6.0 58 14-78 188-245 (283)
79 1gc5_A ADP-dependent glucokina 42.1 39 0.0013 32.7 6.1 108 142-260 220-347 (467)
80 1ua4_A Glucokinase, ADP-depend 36.6 28 0.00095 33.6 4.1 30 289-318 421-453 (455)
81 1gc5_A ADP-dependent glucokina 36.4 28 0.00095 33.7 4.0 19 300-318 445-464 (467)
82 1l2l_A ADP-dependent glucokina 34.3 28 0.00095 33.6 3.6 19 300-318 437-456 (457)
83 3ktn_A Carbohydrate kinase, PF 33.6 41 0.0014 30.5 4.6 59 13-78 233-292 (346)
84 3rzi_A Probable 3-deoxy-D-arab 33.0 1.4E+02 0.0046 28.6 8.0 65 136-201 307-371 (462)
85 3ezx_A MMCP 1, monomethylamine 29.2 1.2E+02 0.0042 25.6 6.7 81 137-236 127-210 (215)
86 2yxt_A Pyridoxal kinase; beta 29.1 38 0.0013 30.3 3.5 31 48-78 217-247 (312)
87 3l52_A Orotidine 5'-phosphate 25.6 2.8E+02 0.0094 24.7 8.5 74 145-230 52-134 (284)
88 3nvt_A 3-deoxy-D-arabino-heptu 24.1 3.6E+02 0.012 25.1 9.4 107 141-265 154-283 (385)
89 1ztd_A Hypothetical protein PF 21.3 98 0.0034 23.5 3.8 28 301-329 66-94 (133)
90 1jxh_A Phosphomethylpyrimidine 21.1 60 0.0021 28.6 3.2 30 49-78 217-247 (288)
91 2yxb_A Coenzyme B12-dependent 21.0 2.3E+02 0.0079 22.6 6.5 64 110-195 41-105 (161)
92 1to3_A Putative aldolase YIHT; 20.7 2.3E+02 0.0079 25.4 7.1 99 159-268 121-231 (304)
93 1zco_A 2-dehydro-3-deoxyphosph 20.6 4.2E+02 0.015 23.0 8.7 106 142-265 36-164 (262)
94 2i5b_A Phosphomethylpyrimidine 20.5 70 0.0024 27.7 3.5 30 49-78 198-228 (271)
No 1
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=100.00 E-value=1.7e-39 Score=305.45 Aligned_cols=251 Identities=36% Similarity=0.651 Sum_probs=205.7
Q ss_pred ccceeeecccccc-----cccccCCchhhhhcCeeeeeeeeeeecCCCCCCccccccCCHHHHHHHHHHhhhCCC-CccC
Q psy11349 88 ERTIATIQSVLER-----TAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDL-MDYT 161 (360)
Q Consensus 88 ~~~vl~I~~~~~~-----~~~~~~~~~~l~~~G~~~~~i~t~~~s~~~~~~~~~g~~l~~~~l~~ll~~~~~~~~-~~~d 161 (360)
+++||+|++++++ .+..++ |+.+|+++++++|+++|||++|..+.+..++.+|++.++++++...+ .++|
T Consensus 3 ~~~VLsI~~~~~~G~~G~~aa~~~----l~~~G~~v~~~~T~~~Snhtg~~~~~g~~~~~~ql~~~~~~~~~~~~~~~~d 78 (300)
T 3zs7_A 3 EKTVLSIQSFVTHGYVGNKAATFP----LQLHGFDVDGINTVCLSNHSGYPVIRGHRMSLQEYDELMEGVRANNFLSNYR 78 (300)
T ss_dssp CCEEEEEEEEESSSSCHHHHHHHH----HHHTTCEEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCGGGCS
T ss_pred CCeEEEEeCccCCCcchHHHHHHH----HHHcCCeeEEeeeEEecCCCCCCCcCCCcCCHHHHHHHHHHHHhcCCcccCC
Confidence 4789999999998 334554 89999999999999999999999999999999999999999987654 5789
Q ss_pred EEEEeeeCCHHHHHHHHHHHHHHHhcCCC----ceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhcc
Q psy11349 162 HVLTGYCRSPQLLSKIGELVKELKKANPT----LMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLT 237 (360)
Q Consensus 162 ~i~~G~l~~~~~~~~i~~~l~~~~~~~~~----~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~ 237 (360)
+|++||+++.++.+.+.++++++++.+|+ +++|||||++++|..|..++..+.+++ +++++|+||||..|++.|+
T Consensus 79 aV~tG~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~-Ll~~adiitPN~~Ea~~L~ 157 (300)
T 3zs7_A 79 YILTGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRE-LVPLADIVTPNYFEASLLS 157 (300)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHH-HGGGCSEECCCHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHH-HhhhCCEecCCHHHHHHHh
Confidence 99999999999999999999998876554 789999999999889988999999975 9999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEEEeccccC-CCceEEEEEeeecc--CCceEEEEEecccCCcccCchHHHHHHHHH
Q psy11349 238 KIPIKDKASLLKTINVLHDRGIKTVVISSSELG-PEKHLLGVASTVVG--GSKTTVSINIPQFDASFTGTGDLFAALMLA 314 (360)
Q Consensus 238 g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g-~~g~~~~~~~~~~~--~~~~~~~~~~~~v~~~t~GaGD~f~a~~~a 314 (360)
|.++.+.+++.+++++|+++|++.|+||+++.| ....+.++...+.+ +.++.++++.++++..++||||+|+|+|++
T Consensus 158 g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~GtGD~fsaal~a 237 (300)
T 3zs7_A 158 GVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEGRYTGTGDVFAACLLA 237 (300)
T ss_dssp SSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSSCBTTHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCCCCcCHHHHHHHHHHH
Confidence 999888899999999999999999999988776 33344333221100 002567788888887789999999999999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q psy11349 315 YITRTNHNVKESLERTIATIQSVLERTAQSF 345 (360)
Q Consensus 315 ~L~~~g~~l~~A~~~A~a~~~~~l~~t~~~~ 345 (360)
+| + |+++++|+++|.++++.+|+++.+.+
T Consensus 238 ~l-~-g~~~~~Av~~A~~~v~~~i~~t~~~~ 266 (300)
T 3zs7_A 238 FS-H-SHPMDVAIGKSMAVLQELIIATRKEG 266 (300)
T ss_dssp HH-T-TSCHHHHHHHHHHHHHHHHHHTTC--
T ss_pred HH-c-CCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99 8 99999999999999999999998754
No 2
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=100.00 E-value=3.5e-36 Score=281.66 Aligned_cols=254 Identities=30% Similarity=0.424 Sum_probs=212.3
Q ss_pred ccceeeecccccc-cccccCCchhhhhcCeeeeeeeeeeecCCCCCCccccccCCHHHHHHHHHHhhhCCC-CccCEEEE
Q psy11349 88 ERTIATIQSVLER-TAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDL-MDYTHVLT 165 (360)
Q Consensus 88 ~~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~~~i~t~~~s~~~~~~~~~g~~l~~~~l~~ll~~~~~~~~-~~~d~i~~ 165 (360)
+++||+|++++++ ++..-++...++.+|++++.++|++.++|++|..+.+..++.++++.+++.+....+ .++|+|++
T Consensus 4 m~~vl~I~~~~~~G~~g~~a~~~~l~~~G~~~~~~~T~~~s~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~d~v~~ 83 (289)
T 3pzs_A 4 MKNILSIQSHVVFGHAGNSAAEFPMRRMGVNVWPLNTVQFSNHTQYGHWTGCVMPASHLTDIVQGIADIDRLKDCDAVLS 83 (289)
T ss_dssp -CEEEEEEEEESSSCSTHHHHHHHHHHTTCEEEEEEEEEESSCGGGSCCCEEECCHHHHHHHHHHHHHTTCGGGCCEEEE
T ss_pred CCeEEEEecccCCCccchHHHHHHHHHcCCeEEEeeeEEcCCCCCCCCcccccCCHHHHHHHHHHHHhcCCccCCCEEEE
Confidence 5789999999999 222222233689999999999999999999988888889988999999998865432 36899999
Q ss_pred eeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCC-CCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccCCCCCCH
Q psy11349 166 GYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNG-RMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKDK 244 (360)
Q Consensus 166 G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g-~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g~~~~~~ 244 (360)
|++++.++.+.+.++++.+++++|++++++|||+++++ ..++.++..+.+++.+++++|+||||+.|++.|+|.++.+.
T Consensus 84 G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~L~g~~~~~~ 163 (289)
T 3pzs_A 84 GYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQLSGERVENV 163 (289)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHHHHTSCCCSH
T ss_pred CCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHHHhCCCCCCH
Confidence 99999999999999999999888878999999999974 45667788888876689999999999999999999988888
Q ss_pred HHHHHHHHHHHhcCCCEEEEeccc-cCC-CceEEEEEeeeccCCceEEEEEecccCC--c-ccCchHHHHHHHHHHHHcC
Q psy11349 245 ASLLKTINVLHDRGIKTVVISSSE-LGP-EKHLLGVASTVVGGSKTTVSINIPQFDA--S-FTGTGDLFAALMLAYITRT 319 (360)
Q Consensus 245 ~d~~~aa~~l~~~g~~~Vlvtg~~-~g~-~g~~~~~~~~~~~~~~~~~~~~~~~v~~--~-t~GaGD~f~a~~~a~L~~~ 319 (360)
+++.+++++|+++|++.|+||+++ .|. ++.+..+..++ ++.++++.++++. . ++||||+|+|+|+++|++
T Consensus 164 ~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~dt~GaGD~f~a~~~~~l~~- 238 (289)
T 3pzs_A 164 EQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTA----DDAWHICRPLVDFGKRQPVGVGDLTSGLLLVNLLK- 238 (289)
T ss_dssp HHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECS----SCEEEEEEECCCCTTSCCTTHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeC----CeEEEEEeeeecCCCCCCCcHHHHHHHHHHHHHHC-
Confidence 999999999999999999999643 332 23333222223 5677788888876 5 999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhCC
Q psy11349 320 NHNVKESLERTIATIQSVLERTAQSFP 346 (360)
Q Consensus 320 g~~l~~A~~~A~a~~~~~l~~t~~~~~ 346 (360)
|+++++|+++|+++++.+|+++.+.|.
T Consensus 239 g~~~~~A~~~A~~~~~~~i~~t~~~g~ 265 (289)
T 3pzs_A 239 GEPLDKALEHVTAAVYEVMLKTQEMGE 265 (289)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999988653
No 3
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=100.00 E-value=7.9e-35 Score=272.68 Aligned_cols=248 Identities=24% Similarity=0.379 Sum_probs=199.9
Q ss_pred cccceeeecccccc-cccccCCchhhhhcCeeeeeeeeeeecCCCCCCccccccCCHHHHHHHHHHhhhCCCCccCEEEE
Q psy11349 87 LERTIATIQSVLER-TAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLT 165 (360)
Q Consensus 87 ~~~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~~~i~t~~~s~~~~~~~~~g~~l~~~~l~~ll~~~~~~~~~~~d~i~~ 165 (360)
++++||+|++++++ ++..-+++..++.+|+....++|++.+++++|..+.+..++ ++++.+++.+...++ .+|+|++
T Consensus 6 ~m~~vL~I~g~d~~GgaGi~adl~~~~a~G~~~~~v~Ta~~sq~tg~~~~~~~~~~-~~~~~~~~~~~~~d~-~~~aik~ 83 (291)
T 3mbh_A 6 KVKKIAAVHDLSGMGRVSLTVVIPILSSMGFQVCPLPTAVLSNHTQYPGFSFLDLT-DEMPKIIAEWKKLEV-QFDAIYT 83 (291)
T ss_dssp CCCEEEEECCEEEESSCTHHHHHHHHHHTTCEEEECCCEEEEECTTSSCCCEEECT-TTHHHHHHHHHHTTC-CCSEEEE
T ss_pred ccCcEEEEeCCCCCCcHHHHHHHHHHHHcCCeeeEEEEEEeccCCCCCCeeecCcH-HHHHHHHHHHHhcCC-ccCEEEE
Confidence 35899999999988 44444445578899999988888866655588776665564 778888887764443 6899999
Q ss_pred eeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCC--CCcCcHHHHHHhhcccceEEeCCHHHHHhccCCCCC-
Q psy11349 166 GYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMY--VPEEVLPIYANELLSVADVICPNQFEAELLTKIPIK- 242 (360)
Q Consensus 166 G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~--~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g~~~~- 242 (360)
|++++++..+.+.++++.+++. ++++|||||++++|.+| ..++.++.++ ++++++|+||||+.|++.|+|.++.
T Consensus 84 G~l~s~~~i~~v~~~l~~~~~~--~~~vv~DPv~~~~g~l~~~~~~~~~~~~~-~ll~~adiitpN~~Ea~~L~g~~~~~ 160 (291)
T 3mbh_A 84 GYLGSPRQIQIVSDFIKDFRQP--DSLIVADPVLGDNGRLYTNFDMEMVKEMR-HLITKADVITPNLTELFYLLDEPYKA 160 (291)
T ss_dssp CCCSSTTHHHHHHHHHHHHCCT--TCEEEECCCCEETTEECTTCCHHHHHHHH-HHGGGCSEECCBHHHHHHHHTCCCCS
T ss_pred CCCCCHHHHHHHHHHHHHhcCC--CCcEEECceeeeCCCCCCCCCHHHHHHHH-HHhccCCEEeCCHHHHHHHhCCCCCC
Confidence 9999999999999999988653 38999999999876555 3577777875 7999999999999999999998764
Q ss_pred --CHHHHHHHHHHHHhcCCCEEEEecccc----CCCceEEEEEeeeccCCceEEEEEecccCCcccCchHHHHHHHHHHH
Q psy11349 243 --DKASLLKTINVLHDRGIKTVVISSSEL----GPEKHLLGVASTVVGGSKTTVSINIPQFDASFTGTGDLFAALMLAYI 316 (360)
Q Consensus 243 --~~~d~~~aa~~l~~~g~~~Vlvtg~~~----g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~t~GaGD~f~a~~~a~L 316 (360)
+.+++.+++++|+++|++.|+|||+|+ |..|++++ ..+ +++.++++.++++..++||||+|+|+|+++|
T Consensus 161 ~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~--~~~---~~~~~~~~~~~~~~dt~GaGD~f~aai~a~l 235 (291)
T 3mbh_A 161 DSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAY--NRQ---GNRYWKVTCPYLPAHYPGTGDTFTSVITGSL 235 (291)
T ss_dssp CCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEE--ETT---TTEEEEEEESCCGGGSTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEE--eCC---CCeEEEEEecccCCCCCChHHHHHHHHHHHH
Confidence 678999999999999999999998875 33444332 111 0245678888876449999999999999999
Q ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q psy11349 317 TRTNHNVKESLERTIATIQSVLERTAQSF 345 (360)
Q Consensus 317 ~~~g~~l~~A~~~A~a~~~~~l~~t~~~~ 345 (360)
++ |.++++|+++|+++++.+|+++.+.+
T Consensus 236 ~~-g~~l~~A~~~A~~~~~~ai~~~~~~~ 263 (291)
T 3mbh_A 236 MQ-GDSLPMALDRATQFILQGIRATFGYE 263 (291)
T ss_dssp HT-TCCHHHHHHHHHHHHHHHHHTTTTSC
T ss_pred Hc-CCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99 99999999999999999999987644
No 4
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=100.00 E-value=4.2e-33 Score=259.76 Aligned_cols=245 Identities=21% Similarity=0.287 Sum_probs=193.4
Q ss_pred ccceeeecccccc-cccccCCchhhhhcCeeeeeeeeeeecCCC-CCCccccccCCHHHHHHHHHHhhhCCCCccCEEEE
Q psy11349 88 ERTIATIQSVLER-TAQSFPNKGQYEVLGFEVDAINTVQFSNHS-GYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLT 165 (360)
Q Consensus 88 ~~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~~~i~t~~~s~~~-~~~~~~g~~l~~~~l~~ll~~~~~~~~~~~d~i~~ 165 (360)
+++||+|++++++ ++..-+++..++.+|+....++|++.+.++ +|..+.+..++ ++++.+++.+...++ ++|+|++
T Consensus 3 ~~~vL~I~~~~~~GgaGi~Adl~~~~a~G~~~~~v~Ta~~sq~t~g~~~~~~~~~~-~~~~~~~~~~~~~d~-~~daik~ 80 (282)
T 3h74_A 3 LSTMLVAEDLSAVGGISLSSALPVLTAMQYDVAALPTSLLSTHTSGYGTPAVVDLS-TWLPQVFAHWTRAQL-HFDQALI 80 (282)
T ss_dssp CEEEEEEEEEEEESSCHHHHHHHHHHHTTEEEEEEEEEEEEECSSSSSSCCEECCT-TTHHHHHHHHHHTTC-CCSEEEE
T ss_pred CCeEEEEeCcCCCChHHHHHHHHHHHHcCCeeeeEEEEEeeEcCCCcceeeeecCh-HHHHHHHHHHHHcCC-ccCEEEE
Confidence 4789999999998 444333445688899999888888655555 77766554454 456655555542232 6899999
Q ss_pred eeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCC--CCcCcHHHHHHhhcccceEEeCCHHHHHhccCCCCCC
Q psy11349 166 GYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMY--VPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKD 243 (360)
Q Consensus 166 G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~--~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g~~~~~ 243 (360)
||+.+++..+.+.++++++ +..++|||||++++|.+| ..++.++.++ ++++++|+||||..|++.|+|.++.+
T Consensus 81 G~l~s~~~i~~v~~~l~~~----~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~-~ll~~adiitpN~~Ea~~L~g~~~~~ 155 (282)
T 3h74_A 81 GYVGSVALCQQITTYLEQQ----TLSLLVVDPVLGDLGQLYQGFDQDYVAAMR-QLIQQADVILPNTTEAALLTGAPYQV 155 (282)
T ss_dssp CCCCSHHHHHHHHHHHHHS----CCSEEEECCCCEETTEECTTCCHHHHHHHH-HHGGGCSEECCCHHHHHHHHTCCCCS
T ss_pred CCCCCHHHHHHHHHHHHHC----CCCcEEEcCeeecCCCCCCCCCHHHHHHHH-HHhccCCEECCCHHHHHHHhCCCCCC
Confidence 9999999999999888765 337999999999876655 3577788885 79999999999999999999988776
Q ss_pred HHHHHHHHHHHHh-cCC-CEEEEeccccC-CCceEEEEEeeeccCCceEEEEEecccCCcccCchHHHHHHHHHHHHcCC
Q psy11349 244 KASLLKTINVLHD-RGI-KTVVISSSELG-PEKHLLGVASTVVGGSKTTVSINIPQFDASFTGTGDLFAALMLAYITRTN 320 (360)
Q Consensus 244 ~~d~~~aa~~l~~-~g~-~~Vlvtg~~~g-~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~t~GaGD~f~a~~~a~L~~~g 320 (360)
.+++.+++++|.+ .|+ +.|+||+++.+ ..|++++ ..+ ++.++++.++++..++||||+|+|+|+++|++ |
T Consensus 156 ~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~--~~~----~~~~~~~~~~v~~dt~GaGD~fsaai~a~l~~-g 228 (282)
T 3h74_A 156 TPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWL--DEA----GHVQYCGARRLPGHYNGTGDTLAAVIAGLLGR-G 228 (282)
T ss_dssp SCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEE--CTT----SCEEEEEEECCSSCCTTHHHHHHHHHHHHHHT-T
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEE--eCC----CeEEEEEecCCCCCCcCHHHHHHHHHHHHHHC-C
Confidence 6788999999998 899 99999977622 1233322 112 56677888888644999999999999999999 9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhhCC
Q psy11349 321 HNVKESLERTIATIQSVLERTAQSFP 346 (360)
Q Consensus 321 ~~l~~A~~~A~a~~~~~l~~t~~~~~ 346 (360)
+++++|+++|+++++.+++++.+.+.
T Consensus 229 ~~l~~A~~~A~~~~~~ai~~~~~~~~ 254 (282)
T 3h74_A 229 YPLAPTLARANQWLNMAVAETIAQNR 254 (282)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999999998765
No 5
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=277.63 Aligned_cols=263 Identities=12% Similarity=0.118 Sum_probs=199.1
Q ss_pred ccccccceeeecccccc-cccccCCchhhhhcCeee-eeeeeeeecCCCCCCcc--ccccCCHHHHHHHHHHhhhCCCCc
Q psy11349 84 KESLERTIATIQSVLER-TAQSFPNKGQYEVLGFEV-DAINTVQFSNHSGYGHL--KGKVITEQDFDELIEGLKMNDLMD 159 (360)
Q Consensus 84 ~~~~~~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~-~~i~t~~~s~~~~~~~~--~g~~l~~~~l~~ll~~~~~~~~~~ 159 (360)
+|...++||+|+|++++ ++..-++++.++.+|+.. ..++.++.+++.++... ....+..+|++.++++++
T Consensus 18 ~~~~~~~vL~IaGsd~~gGAgi~Adlktl~a~g~~~~~~~Tavt~q~~~~v~~~~~~p~~~v~~ql~~~~~d~~------ 91 (550)
T 3rm5_A 18 CNEKLPTVLSIAGTDPSGGAGIEADVKTITAHRCYAMTCITALNAQTPVKVYSINNTPKEVVFQTLESNLKDMK------ 91 (550)
T ss_dssp TTBCCCEEEEEEEBCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEECSSCEEEEEECCHHHHHHHHHHHHHHBC------
T ss_pred cCCCCCEEEEEeCcCCCcHHHHHHHHHHHHHcCCeeceeceEEEeecCCCcceEEECCHHHHHHHHHHHHhCCC------
Confidence 55668999999999999 555433344556667665 33444456666554332 122333456777776654
Q ss_pred cCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccC-CCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccC
Q psy11349 160 YTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDN-GRMYVPEEVLPIYANELLSVADVICPNQFEAELLTK 238 (360)
Q Consensus 160 ~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~-g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g 238 (360)
+|+|++|++ +++..+.+.++++.+++.+ .++|+|||++.+ |..++.++.++.+++++++.+|+||||..|++.|+|
T Consensus 92 ~daIkiG~l-s~~~i~~v~~~l~~~~~~~--~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L~g 168 (550)
T 3rm5_A 92 CNVIKTGML-TAAAIEVLHEKLLQLGENR--PKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKLLG 168 (550)
T ss_dssp CSEEEECSC-CHHHHHHHHHHHHHHGGGS--CEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHHHS
T ss_pred CCEEEECCC-CHHHHHHHHHHHHHhcccC--CCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHHhC
Confidence 999999999 9999999999999886655 789999999864 767778888888877899999999999999999999
Q ss_pred CC--CCCHHHHHHHHHHHHhcCC-CEEEEeccccCCCc-----eEEEEEe-eeccCCceEEEEEecccCCc-ccCchHHH
Q psy11349 239 IP--IKDKASLLKTINVLHDRGI-KTVVISSSELGPEK-----HLLGVAS-TVVGGSKTTVSINIPQFDAS-FTGTGDLF 308 (360)
Q Consensus 239 ~~--~~~~~d~~~aa~~l~~~g~-~~Vlvtg~~~g~~g-----~~~~~~~-~~~~~~~~~~~~~~~~v~~~-t~GaGD~f 308 (360)
.+ +.+.+++.+++++|+++|. +.|+|||++.+.+| +.+++.. .+ ++.+.++.++++.. ++||||+|
T Consensus 169 ~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~----~~~~~~~~~~v~~~~t~GtGD~f 244 (550)
T 3rm5_A 169 EERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAE----QKFIIFKGNFVNTTHTHGTGCTL 244 (550)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTT----TEEEEEEEECCCCSCCBTHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCC----CeEEEEEecCcCCCCCcChhHHH
Confidence 74 5667899999999999887 79999988764221 4334432 23 56777888888876 99999999
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcCCCCCcCC
Q psy11349 309 AALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGSSKASVPAFVA 360 (360)
Q Consensus 309 ~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~t~~~~~~~~~~~~~~~~~~~ 360 (360)
+|+|+++|++ |.++.+|++.|++|++++|+++.+.|++.|...++++|++.
T Consensus 245 saaiaa~La~-G~~l~eAv~~A~~~v~~ai~~~~~~g~g~~~~~gp~~h~~~ 295 (550)
T 3rm5_A 245 ASAIASNLAR-GYSLPQSVYGGIEYVQNAVAIGCDVTKETVKDNGPINHVYA 295 (550)
T ss_dssp HHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHCBCCBCTTCCSCCBCCTTTT
T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcCchhh
Confidence 9999999999 99999999999999999999998888887766888998863
No 6
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.97 E-value=2.1e-29 Score=234.67 Aligned_cols=257 Identities=25% Similarity=0.387 Sum_probs=198.6
Q ss_pred cccceeeecccccc-cccccCCchhhhhcCeeeeeeeeeeecCCCCCCccccccCCHHHHHHHHHHhhhCC-CCccCEEE
Q psy11349 87 LERTIATIQSVLER-TAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMND-LMDYTHVL 164 (360)
Q Consensus 87 ~~~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~~~i~t~~~s~~~~~~~~~g~~l~~~~l~~ll~~~~~~~-~~~~d~i~ 164 (360)
|+++||.|++++.. .+.....+..|+..|+++..+.+.+.++++++..+.+..+++++++.+++.+.... +.++++++
T Consensus 14 ~~~~vL~i~~~~~~g~~G~d~~~~~l~~~Gv~~~~v~t~i~~~~~g~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~v~ 93 (283)
T 2ddm_A 14 LQADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVT 93 (283)
T ss_dssp CCCSEEEEEEEESSSSSTHHHHHHHHHHTTCCEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCCTTCCEEE
T ss_pred ccCeEEEEecccCCCcchHHHHHHHHHHcCCeeeEEeEEEeccCCCcCceeeeeCCHHHHHHHHHHHHhcCCcccCCEEE
Confidence 56899999988755 23222334578899999988887766566665555566777787877766665421 23578999
Q ss_pred EeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccC-CCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccCCCCCC
Q psy11349 165 TGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDN-GRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKD 243 (360)
Q Consensus 165 ~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~-g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g~~~~~ 243 (360)
+|++...+..+.+.++++.+++.++.+++++||++++. +..|..++..+.+.+.+++++|+++||+.|++.|+|.+..+
T Consensus 94 ~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~ 173 (283)
T 2ddm_A 94 TGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRD 173 (283)
T ss_dssp ECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHHTSCCSS
T ss_pred ECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHhCCCCCC
Confidence 99998777788888999988762223899999999875 45676666666665568899999999999999999988777
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeccccCCC-------ceEEEEEeeeccCCceEEEEEecccCCcccCchHHHHHHHHHHH
Q psy11349 244 KASLLKTINVLHDRGIKTVVISSSELGPE-------KHLLGVASTVVGGSKTTVSINIPQFDASFTGTGDLFAALMLAYI 316 (360)
Q Consensus 244 ~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~-------g~~~~~~~~~~~~~~~~~~~~~~~v~~~t~GaGD~f~a~~~a~L 316 (360)
.+++.+++++|.+.|++.|+|| .|.+ |++++. + ++.++++.++++..|+||||+|+|+|+++|
T Consensus 174 ~~~~~~~a~~l~~~g~~~Vvvt---~G~~~~~~~~~G~~~~~---~----~~~~~~~~~~v~vdt~GAGDaf~a~~~~~l 243 (283)
T 2ddm_A 174 LDSAIAAAKSLLSDTLKWVVVT---SASGNEENQEMQVVVVT---A----DSVNVISHSRVKTDLKGTGDLFCAQLISGL 243 (283)
T ss_dssp HHHHHHHHHHHCCSSCCEEEEE---C-------CEEEEEEEE---T----TEEEEEEEECCCCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEc---cccCccCCCceeEEEEe---C----CceEEEeeceeCCCCCChHHHHHHHHHHHH
Confidence 7889999999999999999999 5555 554432 3 566778888876449999999999999999
Q ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcCCCCCc
Q psy11349 317 TRTNHNVKESLERTIATIQSVLERTAQSFPNKGSSKASVPAF 358 (360)
Q Consensus 317 ~~~g~~l~~A~~~A~a~~~~~l~~t~~~~~~~~~~~~~~~~~ 358 (360)
++ |+++++|+++|+++++.+++++...|.+ +..++|+
T Consensus 244 ~~-g~~~~~A~~~A~a~a~~~v~~~~~~g~~----~~~~~~~ 280 (283)
T 2ddm_A 244 LK-GKALTDAVHRAGLRVLEVMRYTQQHESD----ELILPPL 280 (283)
T ss_dssp HT-TCCHHHHHHHHHHHHHHHHHHHHHTTCS----SCCCCCC
T ss_pred Hc-CCCHHHHHHHHHHHHHHHHHHHHhcCCC----ccccCcc
Confidence 99 9999999999999999999999876553 3377765
No 7
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.97 E-value=1.2e-28 Score=232.71 Aligned_cols=251 Identities=46% Similarity=0.804 Sum_probs=195.4
Q ss_pred ccceeeecccccc-----cccccCCchhhhhcCeeeeeeeeeeecCCCCCCccccccCCHHHHHHHHHHhhhCCCCccCE
Q psy11349 88 ERTIATIQSVLER-----TAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTH 162 (360)
Q Consensus 88 ~~~vl~I~~~~~~-----~~~~~~~~~~l~~~G~~~~~i~t~~~s~~~~~~~~~g~~l~~~~l~~ll~~~~~~~~~~~d~ 162 (360)
+++||+|+++... +...+ .|+.+|+++..+.+...++++++..+.|..+++++++.+++.+....+..+++
T Consensus 4 ~~~vl~i~~~~~~g~vG~D~g~~----iL~~~GV~~~~v~~~~~~~~t~~~~~~g~~l~~~~i~~~~~~~~~~~~~~~~~ 79 (312)
T 2yxt_A 4 ECRVLSIQSHVIRGYVGNRAATF----PLQVLGFEIDAVNSVQFSNHTGYAHWKGQVLNSDELQELYEGLRLNNMNKYDY 79 (312)
T ss_dssp CCEEEEEEEEESSSCSTHHHHHH----HHHHTTCEEEEEEEEEESSCTTSSCCCEEECCHHHHHHHHHHHHHTTCCCCSE
T ss_pred CCeEEEEecccCCCccchHhhHH----HHHHcCCeEEEEEEEEecCCCCcCCccCccCCHHHHHHHHHHHHhcCCccCCE
Confidence 4689999876544 23232 28899999988877654566665545677788888988877765432335889
Q ss_pred EEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccC----CCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccC
Q psy11349 163 VLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDN----GRMYVPEEVLPIYANELLSVADVICPNQFEAELLTK 238 (360)
Q Consensus 163 i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~----g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g 238 (360)
+++|++.+++..+.+.++++.++++++.+++++||++++. |..|..++..+.+++.+++++|+++||+.|++.|+|
T Consensus 80 v~~G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g 159 (312)
T 2yxt_A 80 VLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQFEAELLSG 159 (312)
T ss_dssp EEECCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHHHHHHHHS
T ss_pred EEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHHHHHHHhC
Confidence 9999998877788888999999888765679999999875 666765566667754488999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEeccccC---CCceEEEEEe----eeccCCc----eEEEEEecccCCcccCchHH
Q psy11349 239 IPIKDKASLLKTINVLHDRGIKTVVISSSELG---PEKHLLGVAS----TVVGGSK----TTVSINIPQFDASFTGTGDL 307 (360)
Q Consensus 239 ~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g---~~g~~~~~~~----~~~~~~~----~~~~~~~~~v~~~t~GaGD~ 307 (360)
.+..+.+++.+++++|++.|++.|+||+++.| ++|++++... .++ + +.++++.++++..|+||||+
T Consensus 160 ~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~vdttGAGDa 236 (312)
T 2yxt_A 160 RKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPA---GSVVMERIRMDIRKVDAVFVGTGDL 236 (312)
T ss_dssp CCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC-------CCCCEEEEEEEEECCSSCCSSHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccc---cccccceEEEeecccCCCCCCchHH
Confidence 88777788999999999999999999966665 4577654210 110 1 45677877776569999999
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q psy11349 308 FAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSF 345 (360)
Q Consensus 308 f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~t~~~~ 345 (360)
|+|+|+++|++.|+++++|+++|+++++.+++++.+.+
T Consensus 237 f~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~~~~~~ 274 (312)
T 2yxt_A 237 FAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQRTIQCA 274 (312)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999995269999999999999999999998864
No 8
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.96 E-value=3.2e-28 Score=225.18 Aligned_cols=247 Identities=19% Similarity=0.196 Sum_probs=179.1
Q ss_pred ccceeeecccccc-cccccCCchhhhhcCeeeeeeeeeee-cCCCC--CCccccccCCH----HHHHHHHHHhhhCCCCc
Q psy11349 88 ERTIATIQSVLER-TAQSFPNKGQYEVLGFEVDAINTVQF-SNHSG--YGHLKGKVITE----QDFDELIEGLKMNDLMD 159 (360)
Q Consensus 88 ~~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~~~i~t~~~-s~~~~--~~~~~g~~l~~----~~l~~ll~~~~~~~~~~ 159 (360)
+++|++|+|++++ ++....++++++.+|+....+.|+.. +++.+ ...+ ..+++ ++++.+++++ +
T Consensus 3 ~~~vl~i~G~d~~gga~~~a~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~------~ 74 (271)
T 2i5b_A 3 MHKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNSWNHQV--FPIDTDTIRAQLATITDGI------G 74 (271)
T ss_dssp CCEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTTTTEEEE--EECCHHHHHHHHHHHHHHS------C
T ss_pred CCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeEcCCCCceeEE--EeCCHHHHHHHHHHHHhCC------C
Confidence 4689999999999 55566666678888876666665543 33333 1111 12333 3445555443 3
Q ss_pred cCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCc-eEEEccccccC-CCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhcc
Q psy11349 160 YTHVLTGYCRSPQLLSKIGELVKELKKANPTL-MYVCDPVMGDN-GRMYVPEEVLPIYANELLSVADVICPNQFEAELLT 237 (360)
Q Consensus 160 ~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~-~vv~Dpv~~~~-g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~ 237 (360)
+|++++|++++++....+ ++.+++.+ . ++++||++++. +..+..++..+.+.+++++++|++|||..|++.|+
T Consensus 75 ~d~v~~G~l~~~~~~~~~---~~~~~~~~--~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~ 149 (271)
T 2i5b_A 75 VDAMKTGMLPTVDIIELA---AKTIKEKQ--LKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLS 149 (271)
T ss_dssp CSEEEECCCCSHHHHHHH---HHHHHHTT--CSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHH---HHHHHhCC--CCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHh
Confidence 789999998775544444 44455544 5 69999999875 43444444555665478899999999999999999
Q ss_pred CCC-CCCHHHHHHHHHHHHhcCCCEEEEeccc--cCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHH
Q psy11349 238 KIP-IKDKASLLKTINVLHDRGIKTVVISSSE--LGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALML 313 (360)
Q Consensus 238 g~~-~~~~~d~~~aa~~l~~~g~~~Vlvtg~~--~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~ 313 (360)
|.+ ..+.+++.+++++|.++|++.|+||+++ .|.+. ..++.. + ++.++++.++++.+ |+||||+|+|+|+
T Consensus 150 g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~-~~~~~~-~----~~~~~~~~~~~~~~dt~GaGD~f~a~~~ 223 (271)
T 2i5b_A 150 GMDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKA-VDVLYD-G----ETAEVLESEMIDTPYTHGAGCTFSAAVT 223 (271)
T ss_dssp TCCCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSE-EEEEEC-S----SCEEEEEECCCCCSCCBTHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCce-EEEEEe-C----CeEEEEeccccCCCCCCChHHHHHHHHH
Confidence 987 7777889999999999999999999654 23221 112222 3 56778888888887 9999999999999
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcCCCCCc
Q psy11349 314 AYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGSSKASVPAF 358 (360)
Q Consensus 314 a~L~~~g~~l~~A~~~A~a~~~~~l~~t~~~~~~~~~~~~~~~~~ 358 (360)
++|++ |+++++|+++|+++++.+++++.+.|.+.| +++|+
T Consensus 224 ~~l~~-g~~~~~A~~~A~~~~~~~~~~~~~~g~g~~----~~~~~ 263 (271)
T 2i5b_A 224 AELAK-GAEVKEAIYAAKEFITAAIKESFPLNQYVG----PTKHS 263 (271)
T ss_dssp HHHHT-TCCHHHHHHHHHHHHHHHHHTCCCSSSSCC----BCCTT
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHHHHhhccCCCCC----CcCCc
Confidence 99999 999999999999999999998876655544 56664
No 9
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.96 E-value=5e-28 Score=222.21 Aligned_cols=246 Identities=19% Similarity=0.274 Sum_probs=170.1
Q ss_pred cceeeecccccc-cccccCCchhhhhcCeeeeeeeeee-ecCCCCCCccccccCCH----HHHHHHHHHhhhCCCCccCE
Q psy11349 89 RTIATIQSVLER-TAQSFPNKGQYEVLGFEVDAINTVQ-FSNHSGYGHLKGKVITE----QDFDELIEGLKMNDLMDYTH 162 (360)
Q Consensus 89 ~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~~~i~t~~-~s~~~~~~~~~g~~l~~----~~l~~ll~~~~~~~~~~~d~ 162 (360)
++|++|+|++.+ ++....+++.++.+|.....+.++. .++...+... ..+.+ ++++.++++++ +++
T Consensus 2 ~~vl~i~G~d~~ggag~~a~~~~~~~~~~~g~~~vt~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------~~~ 73 (258)
T 1ub0_A 2 RVALTIAGSDSGGGAGVQADLKVFFRFGVYGTSALTLVTAQNTLGVQRV--HLLPPEVVYAQIESVAQDFP------LHA 73 (258)
T ss_dssp CEEEEEEEEETTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEEE--EECCHHHHHHHHHHHHHHSC------CSE
T ss_pred CEEEEEeccCCCchHHHHHHHHHHHHhCCEEeEeeeEEEeecCCceeEE--EeCCHHHHHHHHHHHHcCCC------CCE
Confidence 679999999998 5555444556777776554444443 2333222111 12333 34555555442 789
Q ss_pred EEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccC-CCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccCCCC
Q psy11349 163 VLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDN-GRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPI 241 (360)
Q Consensus 163 i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~-g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g~~~ 241 (360)
+++|++++++..+.+.++ +++.+ .+++++||+++++ |..++.++..+.+.+++++++|++|||+.|++.|+|.+.
T Consensus 74 v~~G~l~~~~~~~~~~~~---~~~~~-~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~ 149 (258)
T 1ub0_A 74 AKTGALGDAAIVEAVAEA---VRRFG-VRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLGRPI 149 (258)
T ss_dssp EEECCCCSHHHHHHHHHH---HHHTT-CCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHCSCC
T ss_pred EEECCcCCHHHHHHHHHH---HHhCC-CCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhCCCC
Confidence 999998866555544444 44433 1589999999864 544444444455555688999999999999999999887
Q ss_pred CCHHHHHHHHHHHHhcCCCEEEEecccc-CCCc-eEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHHHHHc
Q psy11349 242 KDKASLLKTINVLHDRGIKTVVISSSEL-GPEK-HLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLAYITR 318 (360)
Q Consensus 242 ~~~~d~~~aa~~l~~~g~~~Vlvtg~~~-g~~g-~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a~L~~ 318 (360)
.+.+++.+++++|.+.|++.|++|+++. |.+. .+++ . + ++.++++.++++.+ |+||||+|+|+|+++|++
T Consensus 150 ~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~--~-~----~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 222 (258)
T 1ub0_A 150 RTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLA--T-R----GGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAK 222 (258)
T ss_dssp CSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEE--E-T----TEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEE--e-C----CeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 7778899999999998999999995543 3221 3332 2 3 56778888888887 999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcCCCCCc
Q psy11349 319 TNHNVKESLERTIATIQSVLERTAQSFPNKGSSKASVPAF 358 (360)
Q Consensus 319 ~g~~l~~A~~~A~a~~~~~l~~t~~~~~~~~~~~~~~~~~ 358 (360)
|+++++|+++|+++++.+++++.+.|++. ++++|+
T Consensus 223 -g~~~~~a~~~a~~~~~~~~~~~~~~~~g~----~~~~~~ 257 (258)
T 1ub0_A 223 -GRPLAEAVAEAKAYLTRALKTAPSLGHGH----GPLDHW 257 (258)
T ss_dssp -TCCHHHHHHHHHHHHHHHHHTCCCCSSSS----CCCCTT
T ss_pred -CCCHHHHHHHHHHHHHHHHHHhhccCCCC----CCCccC
Confidence 99999999999999999999887665544 455654
No 10
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.95 E-value=5.6e-27 Score=219.00 Aligned_cols=248 Identities=17% Similarity=0.170 Sum_probs=164.9
Q ss_pred ccceeeecccccc-cccccCCchhhhhcCeeeeeeeeee-ecCCCCCCccccccCCHHHHHHHHHHhhhCCCCccCEEEE
Q psy11349 88 ERTIATIQSVLER-TAQSFPNKGQYEVLGFEVDAINTVQ-FSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLT 165 (360)
Q Consensus 88 ~~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~~~i~t~~-~s~~~~~~~~~g~~l~~~~l~~ll~~~~~~~~~~~d~i~~ 165 (360)
++++++|.|++.+ ++....+.+.++..|.....+.|+. .++...+.. ...++++.++..++.+... + .++++++
T Consensus 25 ~~~vl~i~G~D~~ggagi~a~~~~~~~~g~~g~~~it~~~~~n~~~~~~--~~~~~~~~~~~~~~~l~~~-~-~~~~v~~ 100 (288)
T 1jxh_A 25 RINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAENTCGVQS--VYRIEPDFVAAQLDSVFSD-V-RIDTTKI 100 (288)
T ss_dssp CCEEEEEEECCTTSSSHHHHHHHHHHHTTCEEEEEEEEEEEEETTEEEE--EEECCHHHHHHHHHHHHTT-S-CCSEEEE
T ss_pred CCEEEEEeCcCCCchHHHHHHHHHHHHcCCEEeEEeeEEEeecCCCeee--eeeCCHHHHHHHHHHHHhC-C-CCCEEEE
Confidence 5789999999988 4433333445665565544444443 233332221 1234444443322222110 1 3789999
Q ss_pred eeeCCHHHHHHHHHHHHHHHhcCCCce-EEEcccccc-CCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccCC-CCC
Q psy11349 166 GYCRSPQLLSKIGELVKELKKANPTLM-YVCDPVMGD-NGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKI-PIK 242 (360)
Q Consensus 166 G~l~~~~~~~~i~~~l~~~~~~~~~~~-vv~Dpv~~~-~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g~-~~~ 242 (360)
|++.+.+.. ..+++.+++.+ .+ +++||+++. +|..++.++..+.+.+.+++++|+||||+.|++.|+|. +..
T Consensus 101 G~l~~~~~~---~~~~~~~~~~~--~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~~~~~ 175 (288)
T 1jxh_A 101 GMLAETDIV---EAVAERLQRHH--VRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDAPHAR 175 (288)
T ss_dssp CCCCSHHHH---HHHHHHHHHTT--CCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTCCCCC
T ss_pred CCCCCHHHH---HHHHHHHHHCC--CCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcCCCCCC
Confidence 998765444 44455555555 54 999999985 35545554445556444789999999999999999998 777
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEeccccCCCc-----eEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHHHH
Q psy11349 243 DKASLLKTINVLHDRGIKTVVISSSELGPEK-----HLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLAYI 316 (360)
Q Consensus 243 ~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g-----~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a~L 316 (360)
+.+++.+++++|.+.|++.|+|| .|.+| ++++ . + ++.++++.++++.+ |+||||+|+|+|+++|
T Consensus 176 ~~~~~~~~a~~l~~~g~~~Vvvt---~G~~G~~~~~~~~~--~-~----~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l 245 (288)
T 1jxh_A 176 TEQEMLAQGRALLAMGCEAVLMK---GGHLEDAQSPDWLF--T-R----EGEQRFSAPRVNTKNTHGTGCTLSAALAALR 245 (288)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEB---C---------CEEE--C-S----SCEEEC---CCCCSCCBTHHHHHHHHHHHHG
T ss_pred CHHHHHHHHHHHHHhCCCEEEEe---ccCCCCCceeEEEE--E-C----CeEEEEeccccCCCCCCCchHHHHHHHHHHH
Confidence 77889999999999999999999 55555 4433 2 3 55677888888877 9999999999999999
Q ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHH--hhCCCCCCCcCCCCCcC
Q psy11349 317 TRTNHNVKESLERTIATIQSVLERTA--QSFPNKGSSKASVPAFV 359 (360)
Q Consensus 317 ~~~g~~l~~A~~~A~a~~~~~l~~t~--~~~~~~~~~~~~~~~~~ 359 (360)
++ |+++++|+++|+++++.+++++. +.|++. ++++|+.
T Consensus 246 ~~-g~~~~~A~~~A~a~a~~~v~~~~~~~~g~g~----~~~~~~~ 285 (288)
T 1jxh_A 246 PR-HRSWGETVNEAKAWLSAALAQADTLEVGKGI----GPVHHFH 285 (288)
T ss_dssp GG-SSSHHHHHHHHHHHHHHHHTTGGGCCCCSSS----CBCCTTT
T ss_pred Hc-CCCHHHHHHHHHHHHHHHHHhhccccCCCCC----CCCCccc
Confidence 99 99999999999999999998885 334333 3666664
No 11
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=99.86 E-value=6.9e-21 Score=181.39 Aligned_cols=162 Identities=20% Similarity=0.203 Sum_probs=125.5
Q ss_pred ccCEEE-EeeeC--CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHh
Q psy11349 159 DYTHVL-TGYCR--SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAEL 235 (360)
Q Consensus 159 ~~d~i~-~G~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~ 235 (360)
.+++++ .|+.. ++...+.+.++++.+++.+ +++++||+++.. .|...+.......++++++|+++||+.|++.
T Consensus 152 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~Dp~~~~~--~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~ 227 (336)
T 4du5_A 152 SARHLHATGVFPAISATTLPAARKTMDLMRAAG--RSVSFDPNLRPT--LWATPELMRDAINDLATRADWVLPGMEEGRF 227 (336)
T ss_dssp TEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTT--CEEEEECCCCGG--GSSSHHHHHHHHHHHHTTCSEECCBHHHHHH
T ss_pred cCCEEEEcCchhhCChHHHHHHHHHHHHHHHCC--CEEEEeCcCCch--hcCChHHHHHHHHHHHHhCCEEECCHHHHHH
Confidence 477665 67654 5666778888999888877 899999986652 3433233223335788999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccC-Cc-ccCchHHHHHHHH
Q psy11349 236 LTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFD-AS-FTGTGDLFAALML 313 (360)
Q Consensus 236 L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~-~~-t~GaGD~f~a~~~ 313 (360)
|+|.+ +..++++.|.++|++.|+|| +|++|++++. + ++.++++.++++ .. |+||||+|+|+|+
T Consensus 228 l~g~~-----~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~v~~vvdttGAGDaf~a~~~ 292 (336)
T 4du5_A 228 LTGET-----TPEGVARFYRQLGAKLVVVK---LGAEGAYFDG---E----AGSGRVAGFPVAEVVDTVGAGDGFAVGVI 292 (336)
T ss_dssp HHCCC-----SHHHHHHHHHHTTCSEEEEE---CGGGCEEEEE---T----TEEEEECCCCC-------CHHHHHHHHHH
T ss_pred HhCCC-----CHHHHHHHHHhcCCCEEEEE---ecCCceEEEE---C----CeEEEeCCccCCCCCCCccchHHHHHHHH
Confidence 99963 56778889999999999999 8888886543 3 677888888887 66 9999999999999
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 314 AYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 314 a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
++|++ |+++++|+++|+++++.++++
T Consensus 293 ~~l~~-g~~l~~a~~~A~~~aa~~v~~ 318 (336)
T 4du5_A 293 SALLD-GLGVPEAVKRGAWIGARAVQV 318 (336)
T ss_dssp HHHHT-TCCHHHHHHHHHHHHHHHHC-
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHhcc
Confidence 99999 999999999999998777654
No 12
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=99.86 E-value=2.8e-20 Score=174.59 Aligned_cols=176 Identities=18% Similarity=0.257 Sum_probs=139.6
Q ss_pred ccccCCHHHHHHHHHHhhhCCCCccCEEE-EeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHH
Q psy11349 136 KGKVITEQDFDELIEGLKMNDLMDYTHVL-TGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPI 214 (360)
Q Consensus 136 ~g~~l~~~~l~~ll~~~~~~~~~~~d~i~-~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~ 214 (360)
.+..+++++++.+++.+.. +..+++++ .|+++.....+.+.++++.+++++ +++++||+.. .
T Consensus 104 ~g~~~~~~~~~~~~~~~~~--~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~-------------~ 166 (306)
T 2abq_A 104 TAPLIKKEHVQALLEQLTE--LEKGDVLVLAGSVPQAMPQTIYRSMTQIAKERG--AFVAVDTSGE-------------A 166 (306)
T ss_dssp CCCCCCHHHHHHHHHHHTT--CCTTCEEEEESCCCTTSCTTHHHHHHHHHHTTT--CEEEEECCHH-------------H
T ss_pred CCCCCCHHHHHHHHHHHHh--ccCCCEEEEecCCCCCCCHHHHHHHHHHHHhcC--CEEEEECChH-------------H
Confidence 3446777778776665432 22578765 588764333456777888888766 8999999521 1
Q ss_pred HHHhhcc-cceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEE
Q psy11349 215 YANELLS-VADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSIN 293 (360)
Q Consensus 215 ~~~~ll~-~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~ 293 (360)
+ .++++ ++|+++||+.|++.|+|.+..+.+++.+++++|.+.|++.|++| +|++|++++. + ++.++++
T Consensus 167 ~-~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~ 235 (306)
T 2abq_A 167 L-HEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVS---FAGDGALFAS---A----EGMFHVN 235 (306)
T ss_dssp H-HHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHTTCCEEEEE---CGGGCEEEEE---T----TEEEEEC
T ss_pred H-HHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEe---cCCCceEEEe---C----CCEEEEe
Confidence 2 36778 99999999999999999877677888899999999999999999 8888987543 3 5677788
Q ss_pred ecccCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 294 IPQFDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 294 ~~~v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
.++++.. |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 236 ~~~v~vvdttGAGDaF~a~~~~~l~~-g~~~~~a~~~A~a~aa~~v~~ 282 (306)
T 2abq_A 236 VPSGEVRNSVGAGDSVVAGFLAALQE-GKSLEDAVPFAVAAGSATAFS 282 (306)
T ss_dssp CCCCCCCCCSSHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHS
T ss_pred CCCccccCCccHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcC
Confidence 8888776 999999999999999999 999999999999998877765
No 13
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=99.86 E-value=2.5e-20 Score=175.09 Aligned_cols=169 Identities=21% Similarity=0.295 Sum_probs=133.5
Q ss_pred cCCHHHHHHHHHHhhhCCCCccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHh
Q psy11349 139 VITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANE 218 (360)
Q Consensus 139 ~l~~~~l~~ll~~~~~~~~~~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ 218 (360)
.+++++++.+.+.++ .+++++++...+. +.+.++++.+++.+ +++++||++.. .+ . ..
T Consensus 119 ~l~~~~~~~~~~~~~-----~~~~v~~~~~~~~---~~~~~~~~~a~~~g--~~v~~D~~~~~---~~-----~----~~ 176 (309)
T 1rkd_A 119 ALSPALVEAQRERIA-----NASALLMQLESPL---ESVMAAAKIAHQNK--TIVALNPAPAR---EL-----P----DE 176 (309)
T ss_dssp GCCHHHHHTTHHHHH-----HCSEEEECSSSCH---HHHHHHHHHHHHTT--CEEEECCCSCC---CC-----C----HH
T ss_pred cCCHHHHHHHHHhcc-----cCCEEEEeCCCCH---HHHHHHHHHHHHcC--CEEEEECCccc---cc-----h----HH
Confidence 567777765545555 4787876433332 45566777777766 89999997652 11 1 35
Q ss_pred hcccceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccC
Q psy11349 219 LLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFD 298 (360)
Q Consensus 219 ll~~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~ 298 (360)
+++++|+++||+.|++.|+|.+..+.+++.+++++|.+.|++.|+|| +|++|++++. + ++.++++.++++
T Consensus 177 ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~v~ 246 (309)
T 1rkd_A 177 LLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLIT---LGSRGVWASV---N----GEGQRVPGFRVQ 246 (309)
T ss_dssp HHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEE---CGGGCEEEEE---T----TEEEEECCCCCC
T ss_pred HHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEE---ECCCcEEEEe---C----CceEEcCCCCCC
Confidence 67899999999999999999877677888899999999999999999 8888876542 3 567778888887
Q ss_pred Cc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 299 AS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 299 ~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
.. |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 247 ~vdt~GAGD~f~a~~~~~l~~-g~~~~~a~~~a~~~aa~~~~~ 288 (309)
T 1rkd_A 247 AVDTIAAGDTFNGALITALLE-EKPLPEAIRFAHAAAAIAVTR 288 (309)
T ss_dssp CSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred cCCCCChHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHcCC
Confidence 76 999999999999999999 999999999999998777653
No 14
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=99.86 E-value=5.1e-21 Score=180.79 Aligned_cols=176 Identities=19% Similarity=0.249 Sum_probs=133.9
Q ss_pred CCHHHHHHHHHHhhhCCCCccCEEEE-eeeC---CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHH
Q psy11349 140 ITEQDFDELIEGLKMNDLMDYTHVLT-GYCR---SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIY 215 (360)
Q Consensus 140 l~~~~l~~ll~~~~~~~~~~~d~i~~-G~l~---~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~ 215 (360)
+++++++.+.+.++ +++++++ |+.. ++...+.+.++++.+++.+ +++++||++++ ..|..++.....
T Consensus 115 ~~~~~~~~~~~~l~-----~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g--~~v~~Dp~~~~--~~~~~~~~~~~~ 185 (319)
T 3lhx_A 115 LASEQSAAICEELA-----NFDYLYLSGISLAILSPTSREKLLSLLRECRAKG--GKVIFDNNYRP--RLWASKEETQQV 185 (319)
T ss_dssp TSSSSHHHHHHHHT-----TCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTT--CEEEEECCCCG--GGSSCHHHHHHH
T ss_pred cCccchhhHHHHhc-----CCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcC--CEEEEeCcCCc--ccccCHHHHHHH
Confidence 44444555555565 5787765 4432 5666778889999988877 89999997654 244333333333
Q ss_pred HHhhcccceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceE-EEEEe
Q psy11349 216 ANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTT-VSINI 294 (360)
Q Consensus 216 ~~~ll~~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~-~~~~~ 294 (360)
..++++++|+++||+.|++.|+|.+ +..+++++|.+.|++.|+|| +|++|++++. + ++. ++++.
T Consensus 186 ~~~ll~~~di~~~n~~E~~~l~g~~-----~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~ 250 (319)
T 3lhx_A 186 YQQMLECTDIAFLTLDDEDALWGQQ-----PVEDVIARTHNAGVKEVVVK---RGADSCLVSI---A----GEALVDVPA 250 (319)
T ss_dssp HHHHHTTCSEEEEEHHHHHHHHCCC-----CHHHHHHHHHHTTCSEEEEE---ETTEEEEEEE---T----TSCCEEECC
T ss_pred HHHHHhhCCcccCCHHHHHHHhCCC-----CHHHHHHHHHhcCCCEEEEE---ECCCCeEEEE---C----CcceEEccc
Confidence 3578899999999999999999973 56778889999999999999 8899987653 2 333 36776
Q ss_pred c---ccCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 295 P---QFDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 295 ~---~v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+ +++.. |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 251 ~~~~~~~vvdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~~ 299 (319)
T 3lhx_A 251 VKLPKEKVIDTTAAGDSFSAGYLAVRLT-GGSAENAAKRGHLTASTVIQY 299 (319)
T ss_dssp CCCCGGGCCCCTTHHHHHHHHHHHHHTT-TCCHHHHHHHHHHHHHHHTTS
T ss_pred ccCCCCccCCCCCccHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHhhhcc
Confidence 4 45555 999999999999999999 999999999999998777753
No 15
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=99.86 E-value=2.3e-20 Score=177.34 Aligned_cols=234 Identities=16% Similarity=0.194 Sum_probs=162.3
Q ss_pred echHHHHHHHHHHHhhcccccccccccceeeecccccccccccCCchhhhhcCeeeeeeeee---------eecCCCC--
Q psy11349 63 GTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNKGQYEVLGFEVDAINTV---------QFSNHSG-- 131 (360)
Q Consensus 63 G~gd~~~~~l~~~~~~~~~~~~~~~~~~vl~I~~~~~~~~~~~~~~~~l~~~G~~~~~i~t~---------~~s~~~~-- 131 (360)
|..-...|.-++++.. +..+++.-|.+..+-.... .|+..|+++..+... ...+..+
T Consensus 61 GG~~~NvA~~la~LG~---------~~~~i~~vG~D~~G~~l~~---~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~ 128 (331)
T 2fv7_A 61 GGKGANQCVQAARLGA---------MTSMVCKVGKDSFGNDYIE---NLKQNDISTEFTYQTKDAATGTASIIVNNEGQN 128 (331)
T ss_dssp ECHHHHHHHHHHHTTC---------CEEEEEEEESSHHHHHHHH---HHHTTTEECTTEEEESSSCCEEEEEEECTTSCE
T ss_pred CCHHHHHHHHHHHCCC---------CeEEEEEECCChhHHHHHH---HHHHcCCcceeeEecCCCCCceEEEEECCCCCe
Confidence 4334566667777642 2334433344444333333 577788876543321 0111111
Q ss_pred -CCcccc--ccCCHHHHHHHHHHhhhCCCCccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCC
Q psy11349 132 -YGHLKG--KVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVP 208 (360)
Q Consensus 132 -~~~~~g--~~l~~~~l~~ll~~~~~~~~~~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~ 208 (360)
+....+ ..+++++++...+.++ .+++++++...+. +.+.++++.+++.+ +++++||++.+. .+
T Consensus 129 ~~~~~~ga~~~l~~~~~~~~~~~l~-----~~~~v~~~~~~~~---~~~~~~~~~a~~~g--~~v~~Dp~~~~~--~~-- 194 (331)
T 2fv7_A 129 IIVIVAGANLLLNTEDLRAAANVIS-----RAKVMVCQLEITP---ATSLEALTMARRSG--VKTLFNPAPAIA--DL-- 194 (331)
T ss_dssp EEEEECGGGGGCCHHHHHHTHHHHH-----HCSEEEECSSSCH---HHHHHHHHHHHHTT--CEEEECCCSCCT--TC--
T ss_pred EEEecCCccccCCHHHHHHHHHhhc-----cCCEEEEecCCCH---HHHHHHHHHHHHcC--CEEEEeCCcccc--cc--
Confidence 111122 2567777766544555 4788887655443 45566777777766 899999986531 11
Q ss_pred cCcHHHHHHhhcccceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCc-
Q psy11349 209 EEVLPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSK- 287 (360)
Q Consensus 209 ~~~~~~~~~~ll~~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~- 287 (360)
. ..+++++|+++||+.|++.|+|.+..+.+++.+++++|.+.|++.|+|| +|++|++++. + +
T Consensus 195 ---~----~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~VvvT---~G~~G~~~~~---~----~~ 257 (331)
T 2fv7_A 195 ---D----PQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIIT---LGAEGCVVLS---Q----TE 257 (331)
T ss_dssp ---C----THHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTTTCSEEEEE---CGGGCEEEEE---S----SC
T ss_pred ---h----HHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEE---ECCCceEEEE---C----CC
Confidence 1 2567899999999999999999877677888999999999999999999 7888876543 2 4
Q ss_pred -eEEEEEecccCCc-ccCchHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHH
Q psy11349 288 -TTVSINIPQFDAS-FTGTGDLFAALMLAYITRTN--HNVKESLERTIATIQSVLER 340 (360)
Q Consensus 288 -~~~~~~~~~v~~~-t~GaGD~f~a~~~a~L~~~g--~~l~~A~~~A~a~~~~~l~~ 340 (360)
+.++++.++++.. |+||||+|+|+|+++|++ | +++++|+++|+++++.++++
T Consensus 258 ~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~-g~~~~~~~a~~~A~~~aa~~v~~ 313 (331)
T 2fv7_A 258 PEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAY-YPNLSLEDMLNRSNFIAAVSVQA 313 (331)
T ss_dssp CSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHH-CTTSCHHHHHHHHHHHHHHHHTS
T ss_pred CceeEecCCCCccCCCCCchHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHHHHHhCC
Confidence 6677888888776 999999999999999999 9 99999999999998777754
No 16
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=99.86 E-value=1.9e-20 Score=175.92 Aligned_cols=175 Identities=20% Similarity=0.277 Sum_probs=138.4
Q ss_pred ccccCCHHHHHHHHHHhhhCCCCccCEE-EEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHH
Q psy11349 136 KGKVITEQDFDELIEGLKMNDLMDYTHV-LTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPI 214 (360)
Q Consensus 136 ~g~~l~~~~l~~ll~~~~~~~~~~~d~i-~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~ 214 (360)
.+..+++++++.+++.++.. ...+++ +.|+++.....+.+.++++.+++++ +++++||... .
T Consensus 109 ~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~--~~v~~D~~~~-------------~ 171 (309)
T 3umo_A 109 PGAALNEDEFRQLEEQVLEI--ESGAILVISGSLPPGVKLEKLTQLISAAQKQG--IRCIVDSSGE-------------A 171 (309)
T ss_dssp CCCCCCHHHHHHHHHHHTTS--CTTCEEEEESCCCTTCCHHHHHHHHHHHHHTT--CEEEEECCHH-------------H
T ss_pred CCCCCCHHHHHHHHHHHHhc--CCCCEEEEEccCCCCCCHHHHHHHHHHHHhcC--CEEEEECCcH-------------H
Confidence 34457777787777665422 245544 5788765555677888888888877 8999999421 1
Q ss_pred HHHhhccc--ceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhcCC-CEEEEeccccCCCceEEEEEeeeccCCceEEE
Q psy11349 215 YANELLSV--ADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGI-KTVVISSSELGPEKHLLGVASTVVGGSKTTVS 291 (360)
Q Consensus 215 ~~~~ll~~--~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~g~-~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~ 291 (360)
+ .++++. +|+++||+.|++.|+|.+..+.+++.+++++|.+++. +.|+|| +|++|++++. + ++.++
T Consensus 172 l-~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vvvt---~G~~G~~~~~---~----~~~~~ 240 (309)
T 3umo_A 172 L-SAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVS---LGPQGALGVD---S----ENCIQ 240 (309)
T ss_dssp H-HHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEEEE---CGGGCEEEEC---S----SCEEE
T ss_pred H-HHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCcEEEEE---cCcccEEEEE---C----CcEEE
Confidence 2 356666 5999999999999999887777789999999999987 799999 8889986543 3 56778
Q ss_pred EEecccCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q psy11349 292 INIPQFDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 292 ~~~~~v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~ 339 (360)
++.++++.. |+||||+|+|+|+++|++ |+++++|+++|+++++.+++
T Consensus 241 ~~~~~v~vvdttGAGD~f~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~ 288 (309)
T 3umo_A 241 VVPPPVKSQSTVGAGDSMVGAMTLKLAE-NASLEEMVRFGVAAGSAATL 288 (309)
T ss_dssp ECCCSCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHTT
T ss_pred EeCCCcCCCCCcChHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhc
Confidence 888888877 999999999999999999 99999999999998766654
No 17
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=99.86 E-value=3.1e-20 Score=176.28 Aligned_cols=162 Identities=14% Similarity=0.127 Sum_probs=128.6
Q ss_pred ccCEEEE-eee---CCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHH
Q psy11349 159 DYTHVLT-GYC---RSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAE 234 (360)
Q Consensus 159 ~~d~i~~-G~l---~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~ 234 (360)
+++++++ |+. .++...+.+.++++.+++.+ +++++||++++. .|...+......+++++++|+++||+.|++
T Consensus 145 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~Dp~~~~~--~~~~~~~~~~~~~~ll~~~dil~~N~~E~~ 220 (328)
T 4e69_A 145 RADVVYFSGITLAILDQCGRATLLRALAQARATG--RTIAFDPNLRPR--LWAGTGEMTETIMQGAAVSDIALPSFEDEA 220 (328)
T ss_dssp TCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTT--CEEEEECCCCGG--GCSCHHHHHHHHHHHHTTCSEECCBHHHHH
T ss_pred CCCEEEECCchhhccCchHHHHHHHHHHHHHhCC--CEEEEeCCCChh--hcCCHHHHHHHHHHHHHhCCEEeCCHHHHH
Confidence 5787755 543 25667788889999988877 899999987653 343322222233578899999999999999
Q ss_pred hccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecc-cCCc-ccCchHHHHHHH
Q psy11349 235 LLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQ-FDAS-FTGTGDLFAALM 312 (360)
Q Consensus 235 ~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~-v~~~-t~GaGD~f~a~~ 312 (360)
.|+|.+ +..+++++|.+.|++.|+|| +|++|++++. + ++.++++.++ ++.. |+||||+|+|+|
T Consensus 221 ~l~g~~-----~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~~~~vvdttGAGDaf~a~~ 285 (328)
T 4e69_A 221 AWFGDA-----GPDATADRYARAGVRSVVVK---NGPHAVHFLQ---D----GRRGRVPVPPVAQVVDTTAAGDSFNAGL 285 (328)
T ss_dssp HHHTCS-----SHHHHHHHHHTTTCSEEEEB---CTTSCEEEEE---T----TEEEEECCCCCCSCCCCTTHHHHHHHHH
T ss_pred HHcCCC-----CHHHHHHHHHhcCCCEEEEE---eCCCCeEEEe---C----CceEEecCCCCCCccCCCChhHHHHHHH
Confidence 999973 66788889999999999999 8999987643 3 5677777765 6666 999999999999
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 313 LAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 313 ~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+++|++ |+++++|+++|+++++.++++
T Consensus 286 ~~~l~~-g~~l~~a~~~A~~~aa~~v~~ 312 (328)
T 4e69_A 286 LDSVLA-GQPLETAIAAAAALAGQVVQG 312 (328)
T ss_dssp HHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHC-CCCHHHHHHHHHHHHHHHHcc
Confidence 999999 999999999999998777653
No 18
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=99.85 E-value=2.8e-20 Score=176.74 Aligned_cols=176 Identities=19% Similarity=0.194 Sum_probs=134.4
Q ss_pred cccCCHHHHHHHHHHhhhCCCCccCEEE-EeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHH
Q psy11349 137 GKVITEQDFDELIEGLKMNDLMDYTHVL-TGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIY 215 (360)
Q Consensus 137 g~~l~~~~l~~ll~~~~~~~~~~~d~i~-~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~ 215 (360)
+..+++++++.+.+.+... +..+++++ .|+++.....+.+.++++.+++++ +++++||+.. .+
T Consensus 126 g~~~~~~~~~~~~~~~~~~-~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~-------------~l 189 (330)
T 2jg1_A 126 GPEIDNQEAAGFIKHFEQM-MEKVEAVAISGSLPKGLNQDYYAQIIERCQNKG--VPVILDCSGA-------------TL 189 (330)
T ss_dssp CCBCCHHHHHHHHHHHHHH-GGGCSEEEEESCCCBTSCTTHHHHHHHHHHTTT--CCEEEECCHH-------------HH
T ss_pred CCCCCHHHHHHHHHHHHHh-cCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC--CEEEEECCcH-------------HH
Confidence 3456777776655433110 01578765 587754333456677888888766 8899999521 12
Q ss_pred HHhhcc---cceEEeCCHHHHHhccCCCCC-CHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEE
Q psy11349 216 ANELLS---VADVICPNQFEAELLTKIPIK-DKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVS 291 (360)
Q Consensus 216 ~~~ll~---~~diitpN~~E~~~L~g~~~~-~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~ 291 (360)
.++++ ++|+++||+.|++.|+|.+.. +.+++.+++++|.++|++.|+|| +|++|++++. + ++.++
T Consensus 190 -~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l~~~g~~~VvvT---~G~~Ga~~~~---~----~~~~~ 258 (330)
T 2jg1_A 190 -QTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWIIVS---LGAQGAFAKH---N----HTFYR 258 (330)
T ss_dssp -HHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSGGGTTCSEEEEE---CGGGCEEEEE---T----TEEEE
T ss_pred -HHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCEEEEe---ecCCceEEEe---C----CCEEE
Confidence 24454 899999999999999997654 66788889999999999999999 8899987543 3 56778
Q ss_pred EEecccCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 292 INIPQFDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 292 ~~~~~v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
++.++++.. |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 259 ~~~~~v~vvDttGAGDaF~ag~~~~l~~-g~~l~~al~~A~a~aa~~v~~ 307 (330)
T 2jg1_A 259 VNIPTISVLNPVGSGDSTVAGITSAILN-HENDHDLLKKANTLGMLNAQE 307 (330)
T ss_dssp EECCCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred EeCCCccccCCCcHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcC
Confidence 888888877 999999999999999999 999999999999988766653
No 19
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=99.85 E-value=1.6e-20 Score=179.21 Aligned_cols=165 Identities=11% Similarity=0.029 Sum_probs=129.8
Q ss_pred ccCEEEE-eeeC--CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCC---cCcHHHHHHhhcccceEEeCCHHH
Q psy11349 159 DYTHVLT-GYCR--SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVP---EEVLPIYANELLSVADVICPNQFE 232 (360)
Q Consensus 159 ~~d~i~~-G~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~---~~~~~~~~~~ll~~~diitpN~~E 232 (360)
+++++++ |+.. ++...+.+.++++.+++.+ +++++||+++.. .|.. ++..+.+ .++++++|+++||+.|
T Consensus 129 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~r~~--~~~~~~~~~~~~~~-~~ll~~~dil~~N~~E 203 (346)
T 3ktn_A 129 EVDMVHICGISLSLTEKTRDAALILAQKAHAYQ--KKVCFDFNYRPS--LNTANSALFMRQQY-ERILPYCDIVFGSRRD 203 (346)
T ss_dssp TCSEEEECTHHHHHCHHHHHHHHHHHHHHHHTT--CEEEEECCCCGG--GCCHHHHHHHHHHH-HHHGGGCSEEECCHHH
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHHHcC--CEEEEeCCCChH--HcCCccHHHHHHHH-HHHHHhCCEEEccHHH
Confidence 5787765 5553 5666788889999998877 899999987653 3322 2333444 4788999999999999
Q ss_pred HHhccCCC-CC---CHHHHHHHHHHHHhc-CCCEEEEeccccCCCc-------eEEEEEeeeccCCceEEEEEecccCCc
Q psy11349 233 AELLTKIP-IK---DKASLLKTINVLHDR-GIKTVVISSSELGPEK-------HLLGVASTVVGGSKTTVSINIPQFDAS 300 (360)
Q Consensus 233 ~~~L~g~~-~~---~~~d~~~aa~~l~~~-g~~~Vlvtg~~~g~~g-------~~~~~~~~~~~~~~~~~~~~~~~v~~~ 300 (360)
++.|+|.+ .. +.+++.+++++|.++ |++.|+|| +|++| ++++ . + ++.++++.++++.+
T Consensus 204 ~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT---~G~~G~~~~~~g~~~~--~-~----~~~~~~~~~~v~vv 273 (346)
T 3ktn_A 204 LVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGT---TRSHSQNQNYLSGYLY--T-Q----NEYQQSEKRPLLNL 273 (346)
T ss_dssp HHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEEE---EEEECSSCEEEEEEEE--C-S----SCEEECCCEECCCS
T ss_pred HHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEEEEe---cCccccccCcceEEEE--E-C----CceEEeCCCccccC
Confidence 99999986 32 456888899999875 99999999 66665 5433 2 3 56778888888876
Q ss_pred -ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q psy11349 301 -FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 301 -t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~ 339 (360)
|+||||+|+|+|+++|++ |+++++|+++|+++++.+++
T Consensus 274 dttGAGDaF~ag~~~~l~~-g~~l~~a~~~A~a~aa~~v~ 312 (346)
T 3ktn_A 274 DRIGAGDAYAAGILYGYSQ-NWSLEKAVTFATVNGVLAHT 312 (346)
T ss_dssp CCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHTT
T ss_pred CCCchhHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999 99999999999998766654
No 20
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=99.85 E-value=3.2e-20 Score=176.10 Aligned_cols=169 Identities=22% Similarity=0.276 Sum_probs=130.9
Q ss_pred cCCHHHHHHHHHHhhhCCCCccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHh
Q psy11349 139 VITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANE 218 (360)
Q Consensus 139 ~l~~~~l~~ll~~~~~~~~~~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ 218 (360)
.+++++++.+.+.+. .+++++++... + +.+..+++ +++.+ +++++||+.... .+.+ ..
T Consensus 121 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~---~~~~~l~~-a~~~~--~~v~~D~~~~~~---------~~~~-~~ 178 (328)
T 3kzh_A 121 AMNTDFIDSKREIFE-----NAEYTVLDSDN-P---EIMEYLLK-NFKDK--TNFILDPVSAEK---------ASWV-KH 178 (328)
T ss_dssp GCCHHHHHHTHHHHH-----TCSEEEEESSC-H---HHHHHHHH-HHTTT--SEEEEECCSHHH---------HHTS-TT
T ss_pred hCCHHHHHHHHHhhc-----cCCEEEEeCCc-H---HHHHHHHH-HhhcC--CcEEEEeCCHHH---------HHHH-HH
Confidence 456666666555565 47777653221 1 34444445 56555 899999964321 1112 35
Q ss_pred hcccceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccC
Q psy11349 219 LLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFD 298 (360)
Q Consensus 219 ll~~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~ 298 (360)
+++++|+++||+.|++.|+|.+..+.+++.+++++|.+.|++.|+|| +|++|++++. + ++.++++.++++
T Consensus 179 ~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~v~ 248 (328)
T 3kzh_A 179 LIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGLGIKKVFIS---LDADGIFYND---G----VSCGKIKATEVD 248 (328)
T ss_dssp TGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHHTCCEEEEE---CGGGCEEEEC---S----SCEEEEEESSCC
T ss_pred HhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHHHhCCCEEEEE---eCCCCEEEEe---C----CceEEecCCCcc
Confidence 77899999999999999999887778899999999999999999999 8889987643 3 567888998888
Q ss_pred Cc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 299 AS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 299 ~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
.+ |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 249 vvdttGAGDaf~ag~~~~l~~-g~~~~~a~~~A~a~aa~~v~~ 290 (328)
T 3kzh_A 249 VKNVTGAGDSFVAGLGYGYMN-KMPIEDIVKFAMTMSNITISH 290 (328)
T ss_dssp CSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred cCCCCChhHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcC
Confidence 77 999999999999999999 999999999999998777653
No 21
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=99.84 E-value=3.7e-20 Score=173.66 Aligned_cols=176 Identities=20% Similarity=0.260 Sum_probs=137.0
Q ss_pred ccccCCHHHHHHHHHHhhhCCCCccCEE-EEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHH
Q psy11349 136 KGKVITEQDFDELIEGLKMNDLMDYTHV-LTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPI 214 (360)
Q Consensus 136 ~g~~l~~~~l~~ll~~~~~~~~~~~d~i-~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~ 214 (360)
.+..+++++++.+++.+.. +..++++ +.|+++.....+.+.++++.+++.+ +++++||+.. .
T Consensus 104 ~g~~~~~~~~~~~~~~~~~--~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~-------------~ 166 (306)
T 2jg5_A 104 PGPHITSTQFEQLLQQIKN--TTSEDIVIVAGSVPSSIPSDAYAQIAQITAQTG--AKLVVDAEKE-------------L 166 (306)
T ss_dssp CCCCCCHHHHHHHHHHHTT--CCTTCEEEEESCCCTTSCTTHHHHHHHHHHHHC--CEEEEECCHH-------------H
T ss_pred CCCCCCHHHHHHHHHHHHh--ccCCCEEEEeCCCCCCCChHHHHHHHHHHHHCC--CEEEEECChH-------------H
Confidence 3445777888877666532 2257865 4578764333455667778788777 8999999521 1
Q ss_pred HHHhhcc-cceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEE
Q psy11349 215 YANELLS-VADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSIN 293 (360)
Q Consensus 215 ~~~~ll~-~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~ 293 (360)
+ .++++ ++|+++||+.|++.|+|.+..+.+++.+++++|.+.|++.|++| +|++|++++. + ++.++++
T Consensus 167 ~-~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~ 235 (306)
T 2jg5_A 167 A-ESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVS---LGGDGAIYID---K----EISIKAV 235 (306)
T ss_dssp H-HHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHHTTCSCEEEE---CGGGCEEEEC---S----SEEEEEE
T ss_pred H-HHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEc---cCCCceEEEe---C----CcEEEEe
Confidence 2 24566 69999999999999999877777888899999999999999999 8888876542 3 5677888
Q ss_pred ecccCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 294 IPQFDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 294 ~~~v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
.++++.. |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 236 ~~~v~vvdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~a~aa~~v~~ 282 (306)
T 2jg5_A 236 NPQGKVVNTVGSGDSTVAGMVAGIAS-GLSIEKAFQQAVACGTATAFD 282 (306)
T ss_dssp CCCCCCCCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred CCcccccCCcChHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 8888776 999999999999999999 999999999999998777643
No 22
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=99.84 E-value=1.1e-20 Score=179.93 Aligned_cols=163 Identities=14% Similarity=0.069 Sum_probs=119.2
Q ss_pred ccCEEEEe-e-eCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCC-cCcHHHHHHhhcccceEEeCCHHHHHh
Q psy11349 159 DYTHVLTG-Y-CRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVP-EEVLPIYANELLSVADVICPNQFEAEL 235 (360)
Q Consensus 159 ~~d~i~~G-~-l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~-~~~~~~~~~~ll~~~diitpN~~E~~~ 235 (360)
..+++.++ + +.++...+.+.++++.+++.+ +++++||+++.. .|.. +...+.+ ..+++++|+++||+.|++.
T Consensus 129 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g--~~v~~Dp~~~~~--~~~~~~~~~~~~-~~ll~~~dil~~N~~E~~~ 203 (338)
T 3ljs_A 129 DALIFHACSNSMTDADIAEVTFEGMRRAQAAG--AIVSFDLNFRPM--LWPNGENPASRL-WKGLSLADVVKLSSEELDY 203 (338)
T ss_dssp TEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTT--CEEEEECCCCGG--GSCTTCCTHHHH-HHHHHTCSEEEEEHHHHHH
T ss_pred CCCEEEECChHhcCchHHHHHHHHHHHHHHcC--CEEEEECCCChh--hcCCHHHHHHHH-HHHHhhCCEEEecHHHHHH
Confidence 46777654 3 356777788899999999877 899999987753 4433 3344444 5788999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHH
Q psy11349 236 LTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLA 314 (360)
Q Consensus 236 L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a 314 (360)
|+|.+.... .+++++|++.|++.|+|| +|++|++++. + ++.++++.++++.+ |+||||+|+|+|++
T Consensus 204 l~g~~~~~~---~~~~~~l~~~g~~~vvvT---~G~~G~~~~~---~----~~~~~~~~~~v~vvDttGAGDaF~a~~~~ 270 (338)
T 3ljs_A 204 LANTLAADA---NAVIQQLWQGRAQLLLVT---DAAGPVHWYT---R----TAGGEVPTFRVQVQDSNAAGDAFVGGMLY 270 (338)
T ss_dssp HHHHHTSCH---HHHHHHHTTTTCCEEEEE---ETTEEEEEEE---S----SCEEEECC-----------CHHHHHHHHH
T ss_pred HhCCCChhH---HHHHHHHHhcCCCEEEEe---eCCCceEEEE---C----CceEEeCCCCCccCCCCCccHHHHHHHHH
Confidence 998632211 237888988999999999 8999987653 3 67788888888877 99999999999999
Q ss_pred HHHcCC--------------CCHHHHHHHHHHHHHHHHHH
Q psy11349 315 YITRTN--------------HNVKESLERTIATIQSVLER 340 (360)
Q Consensus 315 ~L~~~g--------------~~l~~A~~~A~a~~~~~l~~ 340 (360)
+|++ | +++++|+++|+++++.++++
T Consensus 271 ~l~~-g~~~~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~ 309 (338)
T 3ljs_A 271 TFAQ-QFDDAAALIDFCHDPESIVSTLRFAAAVGALAVTR 309 (338)
T ss_dssp HHHH-HCSSTHHHHHHHTCHHHHHHHHHHHHHHHGGGC--
T ss_pred HHHh-CCCcccchhccccChHHHHHHHHHHHHHHHHHhCC
Confidence 9999 9 89999999999987666553
No 23
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=99.84 E-value=6.9e-20 Score=171.62 Aligned_cols=169 Identities=23% Similarity=0.335 Sum_probs=135.1
Q ss_pred ccCCHHHHHHHHHHhhhCCCCccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHH
Q psy11349 138 KVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYAN 217 (360)
Q Consensus 138 ~~l~~~~l~~ll~~~~~~~~~~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~ 217 (360)
..+++++++.+.+.++ ++++++++...+ .+.+.++++.+++.+ +++++||.... +.. .
T Consensus 117 ~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~---~~~~~~~~~~a~~~~--~~v~~D~~~~~--------~~~----~ 174 (304)
T 3ry7_A 117 MTMTPEDVINAKDAII-----NADFVVAQLEVP---IPAIISAFEIAKAHG--VTTVLNPAPAK--------ALP----N 174 (304)
T ss_dssp GGCCHHHHHTTHHHHH-----TCSEEEEETTSC---HHHHHHHHHHHHHTT--CEEEEECCSCC--------CCC----H
T ss_pred hcCCHHHHHHHHHHhc-----cCCEEEEcCCCC---HHHHHHHHHHHHHcC--CEEEEeCCccc--------ccc----H
Confidence 4677777776655565 578887654333 455667777777766 89999995431 111 3
Q ss_pred hhcccceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEeccc
Q psy11349 218 ELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQF 297 (360)
Q Consensus 218 ~ll~~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v 297 (360)
.+++++|+++||+.|++.|+|.+..+.+++.+++++|.+.|++.|+|| +|++|++++. + ++.++++.+++
T Consensus 175 ~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~v 244 (304)
T 3ry7_A 175 ELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLIT---LGKQGTYFAT---K----NQSQHIEAYKV 244 (304)
T ss_dssp HHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHTTCCEEEEE---CGGGCEEEEC---S----SCEEEECCSSC
T ss_pred HHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEE---eCCCceEEEE---C----CeeEEecCCCc
Confidence 677899999999999999999887777899999999999999999999 8888987543 3 67788888888
Q ss_pred CCc-ccCchHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHH
Q psy11349 298 DAS-FTGTGDLFAALMLAYITRTN-HNVKESLERTIATIQSVLE 339 (360)
Q Consensus 298 ~~~-t~GaGD~f~a~~~a~L~~~g-~~l~~A~~~A~a~~~~~l~ 339 (360)
+.. |+||||+|+|+|+++|++ | +++++|+++|+++++.+++
T Consensus 245 ~~vdttGAGDaf~a~~~~~l~~-g~~~~~~a~~~A~~~aa~~~~ 287 (304)
T 3ry7_A 245 NAIDTTAAGDTFIGAFVSRLNK-SQDNLADAIDFGNKASSLTVQ 287 (304)
T ss_dssp CSSCCSSHHHHHHHHHHHHCCT-TCTTHHHHHHHHHHHHHTTSC
T ss_pred ccCCCCCchHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHhC
Confidence 877 999999999999999999 9 9999999999998655543
No 24
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=99.84 E-value=2.7e-20 Score=176.67 Aligned_cols=160 Identities=19% Similarity=0.223 Sum_probs=129.3
Q ss_pred ccCEEE-EeeeC-CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhc
Q psy11349 159 DYTHVL-TGYCR-SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELL 236 (360)
Q Consensus 159 ~~d~i~-~G~l~-~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L 236 (360)
.+++++ .|+.. ++...+.+.++++.+++.+ +++++||+.+.. .|..++..+.+ .++++++|+++||+.|++.|
T Consensus 130 ~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~~--~~~~~~~~~~~-~~~l~~~dil~~N~~E~~~l 204 (330)
T 3iq0_A 130 DCTHFHIMGSSLFSFHMVDAVKKAVTIVKANG--GVISFDPNIRKE--MLDIPEMRDAL-HFVLELTDIYMPSEGEVLLL 204 (330)
T ss_dssp TEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTT--CEEEEECCCCGG--GGGSHHHHHHH-HHHHHTCSEECCBGGGTTTT
T ss_pred cCCEEEEechhhcCcchHHHHHHHHHHHHHcC--CEEEEcCCCCcc--ccCcHHHHHHH-HHHHhhCCEEecCHHHHHHH
Confidence 577664 57664 5666778889999998877 899999976642 33333334444 47889999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHHH
Q psy11349 237 TKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLAY 315 (360)
Q Consensus 237 ~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a~ 315 (360)
+|. ++..+++++|.+.|++.|+|| +|++|++++. + ++.+++++++++.. |+||||+|+|+|+++
T Consensus 205 ~g~-----~~~~~~~~~l~~~g~~~vvvT---~G~~G~~~~~---~----~~~~~~~~~~v~vvdttGAGDaf~a~~~~~ 269 (330)
T 3iq0_A 205 SPH-----STPERAIAGFLEEGVKEVIVK---RGNQGASYYS---A----NEQFHVESYPVEEVDPTGAGDCFGGAWIAC 269 (330)
T ss_dssp CSC-----SSHHHHHHHHHHHTCSEEEEE---CGGGCEEEEC---S----SCEEEECCCCCCCSCCTTHHHHHHHHHHHH
T ss_pred hCC-----CCHHHHHHHHHHcCCCEEEEE---eCCCceEEEE---C----CceEEecCCCCccCCCCChHHHHHHHHHHH
Confidence 997 356778888988899999999 8899987643 3 56778888888877 999999999999999
Q ss_pred HHcCCCCHHHHHHHHHHHHHHHHH
Q psy11349 316 ITRTNHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 316 L~~~g~~l~~A~~~A~a~~~~~l~ 339 (360)
|++ |+++++|+++|+++++.+++
T Consensus 270 l~~-g~~~~~a~~~A~~~aa~~v~ 292 (330)
T 3iq0_A 270 RQL-GFDAHRALQYANACGALAVT 292 (330)
T ss_dssp HHT-TCCHHHHHHHHHHHHHHHTT
T ss_pred HHc-CCCHHHHHHHHHHHHHHHHc
Confidence 999 99999999999998766664
No 25
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=99.84 E-value=2.4e-19 Score=171.95 Aligned_cols=150 Identities=15% Similarity=0.172 Sum_probs=120.7
Q ss_pred ccCEEEE-eeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhcc
Q psy11349 159 DYTHVLT-GYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLT 237 (360)
Q Consensus 159 ~~d~i~~-G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~ 237 (360)
.++++++ |+... ..+.+.++++.+++++ +++++||... .| .+++++|+++||+.|++.|+
T Consensus 186 ~~~~v~~~g~~~~--~~~~~~~~~~~a~~~g--~~v~~D~~~~----~~-----------~~l~~~dil~pN~~Ea~~l~ 246 (352)
T 4e84_A 186 QHDVVLMSDYAKG--GLTHVTTMIEKARAAG--KAVLVDPKGD----DW-----------ARYRGASLITPNRAELREVV 246 (352)
T ss_dssp GCSEEEEECCSSS--SCSSHHHHHHHHHHTT--CEEEEECCSS----CC-----------STTTTCSEECCBHHHHHHHH
T ss_pred cCCEEEEeCCCCC--CHHHHHHHHHHHHhcC--CEEEEECCCc----ch-----------hhccCCcEEcCCHHHHHHHh
Confidence 5787765 44321 1122566777788877 8999999542 12 35689999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh-cCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHHH
Q psy11349 238 KIPIKDKASLLKTINVLHD-RGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLAY 315 (360)
Q Consensus 238 g~~~~~~~d~~~aa~~l~~-~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a~ 315 (360)
| ...+.+++.+++++|.+ .|++.|+|| +|++|++++. + ++.+++++++++++ |+||||+|+|+|+++
T Consensus 247 g-~~~~~~~~~~~a~~l~~~~g~~~VvvT---~G~~Ga~~~~---~----~~~~~~pa~~v~vvDttGAGDaF~ag~l~~ 315 (352)
T 4e84_A 247 G-QWKSEDDLRARVANLRAELDIDALLLT---RSEEGMTLFS---A----GGELHAPALAREVFDVSGAGDTVIATVATM 315 (352)
T ss_dssp C-CCSSHHHHHHHHHHHHHHHTCSEEEEE---CGGGCEEEEE---T----TEEEEECCCCSCCSCCTTHHHHHHHHHHHH
T ss_pred C-CCCCHHHHHHHHHHHHHHhCCCEEEEE---cCCCcEEEEE---C----CceEEecCCCcCccCCccccHHHHHHHHHH
Confidence 9 55667889999999985 699999999 9999987653 3 67788888888877 999999999999999
Q ss_pred HHcCCCCHHHHHHHHHHHHHHHHH
Q psy11349 316 ITRTNHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 316 L~~~g~~l~~A~~~A~a~~~~~l~ 339 (360)
|++ |+++++|+++|+++++.+++
T Consensus 316 l~~-g~~l~~al~~A~aaaa~~v~ 338 (352)
T 4e84_A 316 LGA-GVPLVDAVVLANRAAGIVVG 338 (352)
T ss_dssp HHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHc-CCCHHHHHHHHHHHHHHHhc
Confidence 999 99999999999998766664
No 26
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=99.84 E-value=1.4e-19 Score=170.05 Aligned_cols=176 Identities=20% Similarity=0.264 Sum_probs=135.3
Q ss_pred cccCCHHHHHHHHHHhhhCCCCccCEE-EEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHH
Q psy11349 137 GKVITEQDFDELIEGLKMNDLMDYTHV-LTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIY 215 (360)
Q Consensus 137 g~~l~~~~l~~ll~~~~~~~~~~~d~i-~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~ 215 (360)
+..+++++++.+++.+.. .+.. +++ +.|+++.....+.+.++++.+++.+ +++++||+.. .+
T Consensus 110 g~~~~~~~~~~~~~~~~~-~~~~-~~v~~~g~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~-------------~~ 172 (309)
T 3cqd_A 110 GAALNEDEFRQLEEQVLE-IESG-AILVISGSLPPGVKLEKLTQLISAAQKQG--IRCIVDSSGE-------------AL 172 (309)
T ss_dssp CCCCCHHHHHHHHHHHHT-SCTT-CEEEEESCCCTTCCHHHHHHHHHHHHTTT--CEEEEECCHH-------------HH
T ss_pred CCCCCHHHHHHHHHHHHH-hhcC-CEEEEECCCCCCCCHHHHHHHHHHHHHcC--CeEEEECChH-------------HH
Confidence 345666777666554431 1235 765 5677765444567778888888766 8999999532 12
Q ss_pred HHhhcccc-eEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhcC-CCEEEEeccccCCCceEEEEEeeeccCCceEEEEE
Q psy11349 216 ANELLSVA-DVICPNQFEAELLTKIPIKDKASLLKTINVLHDRG-IKTVVISSSELGPEKHLLGVASTVVGGSKTTVSIN 293 (360)
Q Consensus 216 ~~~ll~~~-diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~g-~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~ 293 (360)
.+.+.+.+ |+++||+.|++.|+|.+..+.+++.+++++|.+.| ++.|++| +|++|++++. + ++.++++
T Consensus 173 ~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vvvt---~G~~G~~~~~---~----~~~~~~~ 242 (309)
T 3cqd_A 173 SAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVS---LGPQGALGVD---S----ENCIQVV 242 (309)
T ss_dssp HHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEEEE---CGGGCEEEEC---S----SCEEEEC
T ss_pred HHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCCEEEEE---ecCCceEEEE---C----CceEEEe
Confidence 22334788 99999999999999987666678889999999998 9999999 8888986542 3 5577788
Q ss_pred ecccCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 294 IPQFDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 294 ~~~v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
.++++.. |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 243 ~~~v~~vdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~~~aa~~~~~ 289 (309)
T 3cqd_A 243 PPPVKSQSTVGAGDSMVGAMTLKLAE-NASLEEMVRFGVAAGSAATLN 289 (309)
T ss_dssp CCSCCCCCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHTC-
T ss_pred CCccccCCCcCcHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 8888776 999999999999999999 999999999999998777754
No 27
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=99.83 E-value=1e-19 Score=172.19 Aligned_cols=176 Identities=19% Similarity=0.187 Sum_probs=134.1
Q ss_pred cccCCHHHHHHHHHHhhhCCCCccCEEE-EeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHH
Q psy11349 137 GKVITEQDFDELIEGLKMNDLMDYTHVL-TGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIY 215 (360)
Q Consensus 137 g~~l~~~~l~~ll~~~~~~~~~~~d~i~-~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~ 215 (360)
+..+++++++.+++.+... +..+|+++ .|+++.....+.+.++++.+++.+ +++++||+.. .+
T Consensus 108 g~~l~~~~~~~~~~~~~~~-~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g--~~v~~Dp~~~-------------~~ 171 (323)
T 2f02_A 108 GPTVSPEEISNFLENFDQL-IKQAEIVTISGSLAKGLPSDFYQELVQKAHAQE--VKVLLDTSGD-------------SL 171 (323)
T ss_dssp CCBCCHHHHHHHHHHHHHH-HTTCSEEEEESCCCBTSCTTHHHHHHHHHHHTT--CEEEEECCTH-------------HH
T ss_pred CCCCCHHHHHHHHHHHHHh-ccCCCEEEEECCCCCCCChHHHHHHHHHHHHCC--CEEEEECChH-------------HH
Confidence 3456777776554433110 01578775 588764333456677888888766 8999999521 12
Q ss_pred HHhhc---ccceEEeCCHHHHHhccCCCCC-CH-HHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEE
Q psy11349 216 ANELL---SVADVICPNQFEAELLTKIPIK-DK-ASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTV 290 (360)
Q Consensus 216 ~~~ll---~~~diitpN~~E~~~L~g~~~~-~~-~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~ 290 (360)
.+++ +++|+++||+.|++.|+|.+.. +. +++.+++++|.++|++.|+|| +|++|++++. + ++.+
T Consensus 172 -~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~ 240 (323)
T 2f02_A 172 -RQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEWIVIS---LGKDGAIAKH---H----DQFY 240 (323)
T ss_dssp -HHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGGTTCSEEEEE---CGGGCEEEEE---T----TEEE
T ss_pred -HHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHcCCCEEEEe---ecCCceEEEe---C----CCEE
Confidence 2344 5899999999999999997654 44 678888999998999999999 8888987543 3 5677
Q ss_pred EEEecccCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 291 SINIPQFDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 291 ~~~~~~v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+++.++++.. |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 241 ~~~~~~v~vvdttGAGDaF~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~~ 290 (323)
T 2f02_A 241 RVKIPTIQAKNPVGSGDATIAGLAYGLAK-DAPAAELLKWGMAAGMANAQE 290 (323)
T ss_dssp EEECCCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHS
T ss_pred EEcCCCccccCCccHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 8888888776 999999999999999999 999999999999998777764
No 28
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.83 E-value=3.9e-20 Score=172.65 Aligned_cols=162 Identities=14% Similarity=0.176 Sum_probs=127.7
Q ss_pred ccCEEEEeeeC--CHHHHHHHHHHHHHHHh-cCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHh
Q psy11349 159 DYTHVLTGYCR--SPQLLSKIGELVKELKK-ANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAEL 235 (360)
Q Consensus 159 ~~d~i~~G~l~--~~~~~~~i~~~l~~~~~-~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~ 235 (360)
++|++++|++. .+...+.+.++++.+++ .+ .++++||++++. .| . .+.+ .++++++|+++||+.|++.
T Consensus 114 ~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~~~--~~v~~D~~~~~~--~~-~---~~~~-~~~l~~~dil~~N~~E~~~ 184 (296)
T 2qhp_A 114 NTRAVCFGSLAQRNEVSRATINRFLDTMPDIDG--QLKIFDINLRQD--FY-T---KEVL-RESFKRCNILKINDEELVT 184 (296)
T ss_dssp TEEEEEECSGGGSSHHHHHHHHHHHHHSCCTTS--CEEEEECCCCTT--CC-C---HHHH-HHHHHHCSEEEEEHHHHHH
T ss_pred CCCEEEECChHhcChHHHHHHHHHHHHHHhcCC--CEEEEECcCCcc--cc-C---HHHH-HHHHHHCCEEECCHHHHHH
Confidence 47888888764 45566777888887765 45 799999987653 22 1 1233 4678899999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHhc-CCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHH
Q psy11349 236 LTKIPIKDKASLLKTINVLHDR-GIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALML 313 (360)
Q Consensus 236 L~g~~~~~~~d~~~aa~~l~~~-g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~ 313 (360)
|+|....+.+++.+++++|.++ |++.|+|| +|++|++++. + ++.++++.++++.. |+||||+|+|+|+
T Consensus 185 l~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~v~~vdttGAGD~f~a~~~ 254 (296)
T 2qhp_A 185 ISRMFGYPGIDLQDKCWILLAKYNLKMLILT---CGINGSYVFT---P----GVVSFQETPKVPVADTVGAGDSFTAAFC 254 (296)
T ss_dssp HHHHTTCTTSCHHHHHHHHHHHTTCSEEEEE---CGGGCEEEEE---T----TEEEEECCCCCCCSCCTTHHHHHHHHHH
T ss_pred HhcccCCCCCCHHHHHHHHHHhcCCCEEEEe---ecCCCeEEEE---C----CeEEEeCCCCCccccCCCchHHHHHHHH
Confidence 9986443335677788888875 99999999 8888886543 3 56778888888776 9999999999999
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 314 AYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 314 a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
++|++ |+++++|+++|+++++.++++
T Consensus 255 ~~l~~-g~~~~~a~~~a~~~aa~~v~~ 280 (296)
T 2qhp_A 255 ASILN-GKSVPEAHKLAVEVSAYVCTQ 280 (296)
T ss_dssp HHHHH-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 99999 999999999999988776653
No 29
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=99.82 E-value=7.1e-20 Score=176.70 Aligned_cols=180 Identities=15% Similarity=0.183 Sum_probs=135.6
Q ss_pred ccCCHHHHHH--HHHHhhhCCCCccCEEEE-eeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHH
Q psy11349 138 KVITEQDFDE--LIEGLKMNDLMDYTHVLT-GYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPI 214 (360)
Q Consensus 138 ~~l~~~~l~~--ll~~~~~~~~~~~d~i~~-G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~ 214 (360)
..+++++++. +.+.+. .++++++ |+... ...+.+.++++.+++++ +++++||... ++.+...+.
T Consensus 160 ~~l~~~~~~~~~~~~~~~-----~~~~v~~~g~~~~-~~~~~~~~~~~~a~~~g--~~v~ld~~~~-----~~~~~~~~~ 226 (370)
T 3vas_A 160 CDLSLAHIEQPHVWSLVE-----KAQVYYIAGFVIN-TCYEGMLKIAKHSLENE--KLFCFNLSAP-----FLSQFNTKE 226 (370)
T ss_dssp GGCCHHHHTSHHHHHHHH-----HCSEEEEEGGGHH-HHHHHHHHHHHHHHHTT--CEEEEECCCH-----HHHHHCHHH
T ss_pred hhCCHHHcCchhhHHHHh-----hCCEEEEEeeecc-CCHHHHHHHHHHHHHcC--CEEEEECCcH-----HHHHHHHHH
Confidence 4566666653 234444 4787765 55533 34577888889888877 7899998411 111222344
Q ss_pred HHHhhcccceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhc-------CCCEEEEeccccCCCceEEEEEeeeccCCc
Q psy11349 215 YANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDR-------GIKTVVISSSELGPEKHLLGVASTVVGGSK 287 (360)
Q Consensus 215 ~~~~ll~~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~-------g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~ 287 (360)
+ .++++++|+++||+.|++.|+|....+.+++.+++++|.++ +++.|+|| +|++|++++.. .+ +
T Consensus 227 l-~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT---~G~~Ga~~~~~-~~----~ 297 (370)
T 3vas_A 227 V-DEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKRKRLVIIT---RGKNPLLYTDS-SD----S 297 (370)
T ss_dssp H-HHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEE---ETTEEEEEEET-TC----S
T ss_pred H-HHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHHHHHHHhhcccccccCCCEEEEe---cCCCceEEEEc-CC----C
Confidence 4 47889999999999999999987555557889999999885 89999999 99999875430 02 5
Q ss_pred eEEEEEeccc---CCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 288 TTVSINIPQF---DAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 288 ~~~~~~~~~v---~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+.++++.+++ +++ |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 298 ~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~-g~~l~~a~~~A~aaAa~~v~~ 353 (370)
T 3vas_A 298 EIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIR-GKPMITSLHAAVKAAAYIICR 353 (370)
T ss_dssp SCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred eEEEEecccccCCCcCCCCChHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHcc
Confidence 6778888876 556 999999999999999999 999999999999998777753
No 30
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.82 E-value=1.7e-20 Score=176.27 Aligned_cols=224 Identities=15% Similarity=0.147 Sum_probs=152.0
Q ss_pred HHHhhcccccccccccceeeecccccc-cccccCCchhhhhcCeeeeeeeeeeecCCCC-CCccccccC-----CHHHHH
Q psy11349 74 AYITRTNHNVKESLERTIATIQSVLER-TAQSFPNKGQYEVLGFEVDAINTVQFSNHSG-YGHLKGKVI-----TEQDFD 146 (360)
Q Consensus 74 ~~~~~~~~~~~~~~~~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~~~i~t~~~s~~~~-~~~~~g~~l-----~~~~l~ 146 (360)
.++.++..+.||+..++|++|+|++++ ++..++++++++. |+.++.+.|++ +..+ ......+.+ ..+|++
T Consensus 30 ~~lp~r~~~~hKg~~G~vlvIaGsd~~~GA~ilA~~aal~~-Gaglvt~~t~~--~~~~~v~~~~pe~~~~~~~~~~ql~ 106 (310)
T 2r3b_A 30 EVITQRPSDSYKSNFGRVVLIGGNRQYGGAIIMSTEACINS-GAGLTTVITDV--KNHGPLHARCPEAMVVGFEETVLLT 106 (310)
T ss_dssp HHCBCCCTTCCGGGGCEEEEECCCSSSHHHHHHHHHHHHHH-TCSEEEEECCG--GGHHHHHHHCTTCEEECTTCHHHHH
T ss_pred hhCCCCCCCCCCCcCCEEEEEECCCCCCcHHHHHHHHHHHh-CcCcEEEEECh--hhHhHHhhCChhheEecCCcHHHHH
Confidence 345788899999999999999999999 8888888888865 88777666552 2211 101111111 124566
Q ss_pred HHHHHhhhCCCCccCEEEEee-eC-CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhc--cc
Q psy11349 147 ELIEGLKMNDLMDYTHVLTGY-CR-SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELL--SV 222 (360)
Q Consensus 147 ~ll~~~~~~~~~~~d~i~~G~-l~-~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll--~~ 222 (360)
.+++ ++|++++|+ ++ +++..+.+.++++.++ .+ +|+|+||.-.. +...+. .++ +.
T Consensus 107 ~~~~--------~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~--~pvVlDa~g~~----ll~~~~------~~l~~~~ 165 (310)
T 2r3b_A 107 NVVE--------QADVILIGPGLGLDATAQQILKMVLAQHQ-KQ--QWLIIDGSAIT----LFSQGN------FSLTYPE 165 (310)
T ss_dssp HHHH--------HCSEEEECTTCCSSHHHHHHHHHHHHHCC-TT--CEEEEETHHHH----HHHHTT------CCCSSGG
T ss_pred HHhc--------cCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CC--CcEEEcCCcch----hcccch------hhhcCCC
Confidence 6554 278999998 44 6677777777777543 23 79999994221 000000 112 47
Q ss_pred ceEEeCCHHHHHhccCCCCCCH-HHH-HHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc
Q psy11349 223 ADVICPNQFEAELLTKIPIKDK-ASL-LKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS 300 (360)
Q Consensus 223 ~diitpN~~E~~~L~g~~~~~~-~d~-~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~ 300 (360)
+++||||..|++.|+|.++.+. ++. .++++++ + ..|++||.+ .++. . + +.. +++.++.+.+
T Consensus 166 ~~viTPN~~E~~~L~g~~~~~~~~~~a~~aA~~l---g-~~VvlKG~~-----~vi~--~-~----~~~-~~~~~g~~~~ 228 (310)
T 2r3b_A 166 KVVFTPHQMEWQRLSHLPIEQQTLANNQRQQAKL---G-STIVLKSHR-----TTIF--H-A----GEP-FQNTGGNPGM 228 (310)
T ss_dssp GEEEECCHHHHHHHHCCCGGGCCHHHHHHHHHHH---T-SEEEECSTT-----CEEE--C-S----SSC-EECCCCCGGG
T ss_pred CEEEcCCHHHHHHHhCCCCCcccchHHHHHHHHh---C-cEEEEeCCc-----eEEE--E-C----CEE-EEECCCCCCC
Confidence 8999999999999999876543 355 7788887 4 477888643 2322 2 2 333 4555666666
Q ss_pred -ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 301 -FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 301 -t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
++|+||+|+|.++++|++ |+++.+|+..| .|+++....
T Consensus 229 ~t~GtGD~Lag~Iaa~lA~-g~~~~eA~~~A-~~~~~~ag~ 267 (310)
T 2r3b_A 229 ATGGTGDTLAGIIAGFLAQ-FKPTIETIAGA-VYLHSLIGD 267 (310)
T ss_dssp CSTTHHHHHHHHHHHHHHH-SCSSHHHHHHH-HHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHc-CCCHHHHHHHH-HHHHHHHHH
Confidence 889999999999999999 99999999999 455555443
No 31
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=99.82 E-value=2.4e-19 Score=169.34 Aligned_cols=172 Identities=20% Similarity=0.257 Sum_probs=129.9
Q ss_pred ccccCCHHHHHHHHHHhhhCCCCccCEEEE-eeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHH
Q psy11349 136 KGKVITEQDFDELIEGLKMNDLMDYTHVLT-GYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPI 214 (360)
Q Consensus 136 ~g~~l~~~~l~~ll~~~~~~~~~~~d~i~~-G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~ 214 (360)
.+..+++++++.+++.+... +.+++++++ |+++.....+.+.++++.+++.+ +++++||... .
T Consensus 111 ~g~~~~~~~~~~~~~~~~~~-~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~-------------~ 174 (320)
T 3ie7_A 111 AGFTVSQTNKDNLLKQIAKK-VKKEDMVVIAGSPPPHYTLSDFKELLRTVKATG--AFLGCDNSGE-------------Y 174 (320)
T ss_dssp CCCCCCHHHHHHHHHHHHHH-CCTTCEEEEESCCCTTCCHHHHHHHHHHHHHHT--CEEEEECCHH-------------H
T ss_pred CCCCCCHHHHHHHHHHHHHH-hcCCCEEEEeCCCCCCCCHHHHHHHHHHHHhcC--CEEEEECChH-------------H
Confidence 34567777777666544321 126887765 88865555677888888888877 8999999532 1
Q ss_pred HHHhhc-ccceEEeCCHHHHHhccCCCCC-CHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEE
Q psy11349 215 YANELL-SVADVICPNQFEAELLTKIPIK-DKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSI 292 (360)
Q Consensus 215 ~~~~ll-~~~diitpN~~E~~~L~g~~~~-~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~ 292 (360)
+. ..+ +++|+++||+.|++.|+|.+.. +.+++. ++.+. ++.|+|| +|++|++++. + ++.+++
T Consensus 175 l~-~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~----~~~~~-~~~vvvt---~G~~G~~~~~---~----~~~~~~ 238 (320)
T 3ie7_A 175 LN-LAVEMGVDFIKPNEDEVIAILDEKTNSLEENIR----TLAEK-IPYLVVS---LGAKGSICAH---N----GKLYQV 238 (320)
T ss_dssp HH-HHHHHCCSEECCBTTGGGGGSCTTCCCHHHHHH----HHTTT-CSEEEEE---CGGGCEEEEE---T----TEEEEE
T ss_pred HH-HHHhcCCeEEeeCHHHHHHHhCCCcCCCHHHHH----HHHhh-CCEEEEE---cCCCceEEEe---C----CcEEEE
Confidence 22 334 4899999999999999998654 233333 33333 8899999 8889987653 3 677888
Q ss_pred EecccCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 293 NIPQFDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 293 ~~~~v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+.++++.. |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 239 ~~~~v~vvdttGAGDaF~ag~~~~l~~-g~~~~~a~~~A~a~aa~~v~~ 286 (320)
T 3ie7_A 239 IPPKVQERNDTGAGDVFVGAFIAGLAM-NMPITETLKVATGCSASKVMQ 286 (320)
T ss_dssp ECCCCCCSCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred eCCccCCCCCcCchHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHhC
Confidence 99888877 999999999999999999 999999999999998776653
No 32
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=99.81 E-value=5.9e-19 Score=166.49 Aligned_cols=159 Identities=15% Similarity=0.076 Sum_probs=120.9
Q ss_pred ccCEEE-EeeeCC-HHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCc-CcHHHHHHhhcccceEEeCCHHHHHh
Q psy11349 159 DYTHVL-TGYCRS-PQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPE-EVLPIYANELLSVADVICPNQFEAEL 235 (360)
Q Consensus 159 ~~d~i~-~G~l~~-~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~-~~~~~~~~~ll~~~diitpN~~E~~~ 235 (360)
++++++ .|+... +...+.+..+++.+++ + .++++||+++.. .|..+ +..+.+ .++++++|+++||+.|++.
T Consensus 135 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~--~~v~~D~~~~~~--~~~~~~~~~~~~-~~~l~~~dil~~N~~E~~~ 208 (319)
T 3pl2_A 135 EADILWFTLTGFSEEPSRGTHREILTTRAN-R--RHTIFDLDYRPM--FWESPEEATKQA-EWALQHSTVAVGNKEECEI 208 (319)
T ss_dssp HCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-C--SCEEEECCCCGG--GSSCHHHHHHHH-HHHHTTCSEEEECHHHHHH
T ss_pred cCCEEEEecccccCchhHHHHHHHHHHHHH-C--CcEEEeCCCChh--hcCCHHHHHHHH-HHHHHhCCEEEcCHHHHHH
Confidence 467665 455432 2233445556665544 3 578999987653 34332 223333 5788999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHH
Q psy11349 236 LTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLA 314 (360)
Q Consensus 236 L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a 314 (360)
|+|.+ +..+++++|.++|++.|+|| +|++|++++. + ++.++++.++++.. |+||||+|+|+|++
T Consensus 209 l~g~~-----~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~v~vvdttGAGDaf~a~~~~ 273 (319)
T 3pl2_A 209 AVGET-----EPERAGRALLERGVELAIVK---QGPKGVMAMT---K----DETVEVPPFFVDVINGLGAGDAFGGALCH 273 (319)
T ss_dssp HHSCC-----SHHHHHHHHHHTTCSEEEEE---EETTEEEEEC---S----SCEEEECCCCCCCSCCTTHHHHHHHHHHH
T ss_pred HcCCC-----CHHHHHHHHHhcCCCEEEEE---ECCCCeEEEE---C----CceEEeCCcccCCCCCcCchHHHHHHHHH
Confidence 99963 56778889999999999999 8899986543 3 56788888888877 99999999999999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHHHHH
Q psy11349 315 YITRTNHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 315 ~L~~~g~~l~~A~~~A~a~~~~~l~ 339 (360)
+|++ |+++++|+++|+++++.+++
T Consensus 274 ~l~~-g~~~~~a~~~A~~~aa~~v~ 297 (319)
T 3pl2_A 274 GLLS-EWPLEKVLRFANTAGALVAS 297 (319)
T ss_dssp HHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHHc-CCCHHHHHHHHHHHHHHHHh
Confidence 9999 99999999999998766664
No 33
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.81 E-value=1.4e-19 Score=170.17 Aligned_cols=227 Identities=11% Similarity=0.095 Sum_probs=152.2
Q ss_pred HHhhcccccccccccceeeecccccc-cccccCCchhhhhcCeeeeeeeeeeecCCCC-CCccccccC-----CHHHHHH
Q psy11349 75 YITRTNHNVKESLERTIATIQSVLER-TAQSFPNKGQYEVLGFEVDAINTVQFSNHSG-YGHLKGKVI-----TEQDFDE 147 (360)
Q Consensus 75 ~~~~~~~~~~~~~~~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~~~i~t~~~s~~~~-~~~~~g~~l-----~~~~l~~ 147 (360)
++..+..+.||+..++|++|+|++++ ++..++++++++. |+.++.+.|+ ++..+ +.....+.+ ..+|++.
T Consensus 45 ~lp~r~~~~hKg~~G~vlvIaGsd~~~GAgilA~~aal~~-Gaglvt~~t~--q~~~~~v~~~~pe~~~~~~~~~~ql~~ 121 (311)
T 3bgk_A 45 IIKPRPLNSHKGTFGRVLLIGGNYPYGGAIIMAALACVNS-GAGLVTVATH--KDNITALHSHLPEAMAFDMVEKDRLSE 121 (311)
T ss_dssp HSCCCCSSCCSSTTCEEEEECCCTTCHHHHHHHHHHHHHT-TCSEEEEEEC--GGGHHHHHHHCTTSEEEETTCHHHHHH
T ss_pred hCCCCCCCCCCccCCEEEEEECCCCCCCHHHHHHHHHHHh-CcCeEEEEEC--hhhHhHHhhCChhHheeccccHHHHHH
Confidence 35788899999999999999999999 8888888888855 8877766665 23211 111111111 1245665
Q ss_pred HHHHhhhCCCCccCEEEEee-eC-CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhc-ccce
Q psy11349 148 LIEGLKMNDLMDYTHVLTGY-CR-SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELL-SVAD 224 (360)
Q Consensus 148 ll~~~~~~~~~~~d~i~~G~-l~-~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll-~~~d 224 (360)
+++ ++|++++|+ ++ +++..+.+.++++.++ .+ +|+|+||.-.. +...+. +.++ +.++
T Consensus 122 ~~~--------~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~--~pvVlDa~g~~----ll~~~~-----~l~L~~~~~ 181 (311)
T 3bgk_A 122 QIT--------AADVVLMGPGLAEDDLAQTTFDVVWQAIE-PK--QTLIIDGSAIN----LLAKRK-----PAIWPTKQI 181 (311)
T ss_dssp HHH--------HCSEEEECTTCCSSHHHHHHHHHHHHHCC-TT--SEEEEETHHHH----HHHHCC------CCCSCSCE
T ss_pred Hhc--------cCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CC--CeEEEeCChhh----hhccCh-----hhcCCCCCE
Confidence 544 378999998 44 6777777777777653 23 79999994211 100000 0102 4789
Q ss_pred EEeCCHHHHHhccCCCCCCH-HHH-HHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-c
Q psy11349 225 VICPNQFEAELLTKIPIKDK-ASL-LKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-F 301 (360)
Q Consensus 225 iitpN~~E~~~L~g~~~~~~-~d~-~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t 301 (360)
+||||..|++.|+|.++.+. ++. .+++++|.+ + ..|++||.+ .++. . ++.++++.++.+.+ +
T Consensus 182 viTPN~~E~~~L~g~~~~~~~~d~~~~aa~~l~~-g-~~VvlkG~~-----~~i~--~------~~~~~~~~~~~~~~~t 246 (311)
T 3bgk_A 182 ILTPHQKEWERLSGLTIPEQIEAATQTALAHFPK-E-TILVAKSHQ-----TKIY--Q------GQKIGHIQVGGPYQAT 246 (311)
T ss_dssp EEECCSCC-CTTTCCCSTTCCHHHHHHHHTTSCT-T-CEEEECSSS-----CEEE--E------TTEEEEECCCCGGGCS
T ss_pred EECCcHHHHHHHhCCCCCcchhhHHHHHHHHHhc-C-CEEEEeCCC-----eEEE--E------CCEEEEECCCCCCCCC
Confidence 99999999999999877654 567 888888887 4 567777532 2332 2 23345666777776 8
Q ss_pred cCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 302 TGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 302 ~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+|+||+|+|.++++|++.|.++.+|++.| .|++.....
T Consensus 247 ~GtGD~Lag~iaa~lA~~g~~~~eA~~~A-~~~~~~ag~ 284 (311)
T 3bgk_A 247 GGMGDTLAGMIAGFVAQFHTDRFEVAAAA-VFLHSYIAD 284 (311)
T ss_dssp TTHHHHHHHHHHHHHHHCCSCHHHHHHHH-HHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHccCCCHHHHHHHH-HHHHHHHHH
Confidence 99999998888887765368999999999 455555433
No 34
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=99.81 E-value=1.9e-19 Score=172.01 Aligned_cols=177 Identities=14% Similarity=0.241 Sum_probs=129.7
Q ss_pred cCCHHHHHH--HHHHhhhCCCCccCEEEE-eeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHH
Q psy11349 139 VITEQDFDE--LIEGLKMNDLMDYTHVLT-GYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIY 215 (360)
Q Consensus 139 ~l~~~~l~~--ll~~~~~~~~~~~d~i~~-G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~ 215 (360)
.+++++++. +.+.++ +++++++ |+... ...+.+.++++.+++++ +++++||... ++.+...+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~-~~~~~~~~~~~~a~~~g--~~v~~d~~~~-----~~~~~~~~~l 211 (347)
T 3otx_A 145 HLSSEHMRSPAVVRAMD-----ESRIFYFSGFTLT-VDVNHVLQACRKAREVD--GLFMINLSAP-----FIMQFFSAQL 211 (347)
T ss_dssp GCCHHHHTSHHHHHHHH-----HCSEEEEEGGGGG-TCHHHHHHHHHHHHHTT--CEEEEECCCH-----HHHHHCHHHH
T ss_pred cCCHHHcCchhhHHHHh-----hCCEEEEeeeecc-cCHHHHHHHHHHHHHhC--CEEEeeCchh-----hhHHHHHHHH
Confidence 455666642 233444 4776654 65542 23467788888888877 7899998411 1112223444
Q ss_pred HHhhcccceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHH------hcCCCEEEEeccccCCCceEEEEEeeeccCCceE
Q psy11349 216 ANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLH------DRGIKTVVISSSELGPEKHLLGVASTVVGGSKTT 289 (360)
Q Consensus 216 ~~~ll~~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~------~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~ 289 (360)
.++++++|+++||+.|++.|+|....+.+++.+++++|. +.+++.|+|| +|++|+++.. + ++.
T Consensus 212 -~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT---~G~~Ga~~~~---~----~~~ 280 (347)
T 3otx_A 212 -GEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFT---RDIESTVLAT---K----DGV 280 (347)
T ss_dssp -HHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEE---ETTEEEEEEE---T----TEE
T ss_pred -HHHHhhCCEEecCHHHHHHHhcccCCCcCCHHHHHHHHHhhhccccCCCCEEEEE---eCCCCeEEEE---C----CeE
Confidence 478899999999999999998753323346677788887 4689999999 9999987653 3 567
Q ss_pred EEEEeccc---CCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 290 VSINIPQF---DAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 290 ~~~~~~~v---~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
++++.+++ +++ |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 281 ~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~-g~~l~~a~~~a~~~aa~~v~~ 334 (347)
T 3otx_A 281 ETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAV-GKDLRRCCETGHYTAQEVIQR 334 (347)
T ss_dssp EEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHTC
T ss_pred EEEEecccCCCCCCCCCChHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHcc
Confidence 77887776 455 999999999999999999 999999999999998777754
No 35
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=99.81 E-value=3.2e-19 Score=171.77 Aligned_cols=165 Identities=18% Similarity=0.217 Sum_probs=125.1
Q ss_pred ccCEEEE-eeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhcc
Q psy11349 159 DYTHVLT-GYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLT 237 (360)
Q Consensus 159 ~~d~i~~-G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~ 237 (360)
.++++++ |+... ...+.+.++++.+++++ +++++||.. .++.+...+.+ ..+++++|+++||+.|++.|+
T Consensus 176 ~~~~v~i~G~~~~-~~~~~~~~~~~~a~~~g--~~v~~d~~~-----~~~~~~~~~~l-~~~l~~~dil~~N~~Ea~~l~ 246 (365)
T 3loo_A 176 GAQFFYVSGFFFT-VSFESALSVAKEAAATG--RMFMMNLSA-----PFVPQFYKNNL-EEIFPYVDVLFGNETEAIALA 246 (365)
T ss_dssp HCSEEEEEGGGHH-HHHHHHHHHHHHHHHTT--CEEEEECCS-----THHHHHCHHHH-HHHGGGCSEEEEEHHHHHHHH
T ss_pred hCCEEEEeeeecc-CCHHHHHHHHHHHHHcC--CEEEEECCc-----hhhhHHHHHHH-HHHHHhCCEEecCHHHHHHHh
Confidence 4777755 66543 34567888888888877 789999831 11112223444 477899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc------CCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEeccc---CCc-ccCchHH
Q psy11349 238 KIPIKDKASLLKTINVLHDR------GIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQF---DAS-FTGTGDL 307 (360)
Q Consensus 238 g~~~~~~~d~~~aa~~l~~~------g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v---~~~-t~GaGD~ 307 (360)
|....+.+++.+++++|.+. +++.|+|| +|++|++++. ..+ ++.++++.+++ +++ |+||||+
T Consensus 247 g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT---~G~~Ga~~~~-~~~----~~~~~~~~~~v~~~~vvDttGAGDa 318 (365)
T 3loo_A 247 KEFNYGTEDLREIGKRIAALPKENGKRKRIVIIT---QGSDPVLLIE-AGT----DNVREFPVQKLAPEQMVDTNGAGDA 318 (365)
T ss_dssp HHTTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEE---ETTEEEEEEE-TTC----SCCEEECCCCCC------CTTHHHH
T ss_pred cccCCCCCCHHHHHHHHHhhhhhccCCCCEEEEE---eCCCCEEEEE-ecC----CeEEEEeccccCCCCccCCCChHHH
Confidence 86444445778888888874 88999999 9999987651 013 56778888877 555 9999999
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Q psy11349 308 FAALMLAYITRTNHNVKESLERTIATIQSVLERT 341 (360)
Q Consensus 308 f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~t 341 (360)
|+|+|+++|++ |+++++|+++|+++++.++++.
T Consensus 319 F~agfl~~l~~-g~~l~~a~~~a~~~Aa~~v~~~ 351 (365)
T 3loo_A 319 FVGGFLAQLLQ-SRTVDVCIKCGIWAAREIIQRS 351 (365)
T ss_dssp HHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHcCC
Confidence 99999999999 9999999999999998888764
No 36
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.80 E-value=7.3e-19 Score=166.95 Aligned_cols=174 Identities=17% Similarity=0.243 Sum_probs=131.5
Q ss_pred cccCCHHHHHHHHHHhhhCCCCccCEEEE-eeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHH
Q psy11349 137 GKVITEQDFDELIEGLKMNDLMDYTHVLT-GYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIY 215 (360)
Q Consensus 137 g~~l~~~~l~~ll~~~~~~~~~~~d~i~~-G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~ 215 (360)
+..+++++++.+++.+... +..++++++ |+++.....+.+.++++.+++.+ +++++||+.. .+
T Consensus 125 g~~l~~~~~~~~~~~~~~~-~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~-------------~~ 188 (331)
T 2ajr_A 125 GPDVTDMDVNHFLRRYKMT-LSKVDCVVISGSIPPGVNEGICNELVRLARERG--VFVFVEQTPR-------------LL 188 (331)
T ss_dssp CCCCCHHHHHHHHHHHHHH-HTTCSEEEEESCCCTTSCTTHHHHHHHHHHHTT--CEEEEECCHH-------------HH
T ss_pred CCCCCHHHHHHHHHHHHHh-cccCCEEEEECCCCCCCCHHHHHHHHHHHHHcC--CEEEEECChH-------------HH
Confidence 3457777776654332110 015787755 77754333456677788888876 8999999631 12
Q ss_pred HHhhcc---cceEEeCCHHH-HHhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEE
Q psy11349 216 ANELLS---VADVICPNQFE-AELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVS 291 (360)
Q Consensus 216 ~~~ll~---~~diitpN~~E-~~~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~ 291 (360)
.++++ ++|+++||+.| ++.|+|.+..+.+++.+++++|.++ ++.|+|| +|++|++++. + ++.++
T Consensus 189 -~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l~~~-~~~vvvT---~G~~Ga~~~~---~----~~~~~ 256 (331)
T 2ajr_A 189 -ERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEK-SQVSVVS---YEVKNDIVAT---R----EGVWL 256 (331)
T ss_dssp -HHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHHHHH-SSEEEEE---ETTTEEEEEC---S----SCEEE
T ss_pred -HHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHHHHh-cCEEEEe---ecCCceEEEe---C----CcEEE
Confidence 23444 49999999999 9999998776777888899999888 8999999 9999987542 3 56677
Q ss_pred EE-ecccCCc-ccCchHHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHH
Q psy11349 292 IN-IPQFDAS-FTGTGDLFAALMLAYIT-RTNHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 292 ~~-~~~v~~~-t~GaGD~f~a~~~a~L~-~~g~~l~~A~~~A~a~~~~~l~ 339 (360)
++ .++++.. |+||||+|+|+|+++|+ + |+++++|+++|++++..+++
T Consensus 257 ~~~~~~v~vvDttGAGDaF~ag~l~~l~~~-g~~~~~al~~A~a~aa~~v~ 306 (331)
T 2ajr_A 257 IRSKEEIDTSHLLGAGDAYVAGMVYYFIKH-GANFLEMAKFGFASALAATR 306 (331)
T ss_dssp EEESSCCCGGGCTTHHHHHHHHHHHHHHHH-CSCHHHHHHHHHHHHHHHTT
T ss_pred EecCCcccccCCCchHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHc
Confidence 88 8877776 99999999999999999 9 99999999999998766654
No 37
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.80 E-value=3.3e-19 Score=170.61 Aligned_cols=166 Identities=16% Similarity=0.151 Sum_probs=127.8
Q ss_pred ccCEEEE-eeeC--CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHh
Q psy11349 159 DYTHVLT-GYCR--SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAEL 235 (360)
Q Consensus 159 ~~d~i~~-G~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~ 235 (360)
.++++++ |+.+ ++...+.+.++++.+++.+ +++++||+++.. .|..++..+.+ ..+++++|+++||+.|++.
T Consensus 138 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~Dp~~~~~--~~~~~~~~~~~-~~ll~~~dil~~N~~E~~~ 212 (351)
T 2afb_A 138 GARWFHFSGITPPLGKELPLILEDALKVANEKG--VTVSCDLNYRAR--LWTKEEAQKVM-IPFMEYVDVLIANEEDIEK 212 (351)
T ss_dssp TEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHT--CEEEEECCCCTT--TCCHHHHHHHH-HHHGGGCSEEEECHHHHHH
T ss_pred CCCEEEEeCcccccChhHHHHHHHHHHHHHHcC--CEEEEeCCCchh--cCChHHHHHHH-HHHHhhCCEEEecHHHHHH
Confidence 5787765 4543 3445677888888888877 899999987642 33212233444 5788999999999999999
Q ss_pred ccCCCCC---------CHHHHHHHHHHHHhc-CCCEEEEeccccCCCce--------EEEEEeeeccCCceEEEEEeccc
Q psy11349 236 LTKIPIK---------DKASLLKTINVLHDR-GIKTVVISSSELGPEKH--------LLGVASTVVGGSKTTVSINIPQF 297 (360)
Q Consensus 236 L~g~~~~---------~~~d~~~aa~~l~~~-g~~~Vlvtg~~~g~~g~--------~~~~~~~~~~~~~~~~~~~~~~v 297 (360)
|+|.+.. +.+++.+++++|.+. |++.|+|| +|++|+ +++ . + ++.++++.+++
T Consensus 213 l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT---~G~~G~~~~~~~g~~~~--~-~----~~~~~~~~~~v 282 (351)
T 2afb_A 213 VLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGIT---LRESISATVNYWSVMVF--E-N----GQPHFSNRYEI 282 (351)
T ss_dssp HHCCCCSCC-------CHHHHHHHHHHHHHHHCCSEEEEE---EEECSCSSEEEEEEEEE--E-T----TEEEECCCEEE
T ss_pred HhCCCcccccccccccchhhHHHHHHHHHHHcCCCEEEEE---eCCcCccccccceeEEE--e-C----CcEEEcCCCCC
Confidence 9997653 566788889999875 99999999 666653 322 2 3 56677787777
Q ss_pred CCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 298 DAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 298 ~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+.. |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 283 ~vvdttGAGDaF~ag~~~~l~~-g~~l~~a~~~A~~~aa~~v~~ 325 (351)
T 2afb_A 283 HIVDRVGAGDSFAGALIYGSLM-GFDSQKKAEFAAAASCLKHTI 325 (351)
T ss_dssp ECSCCTTHHHHHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHTTS
T ss_pred ccCCCCCchHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCC
Confidence 766 999999999999999999 999999999999998776653
No 38
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=99.80 E-value=3.1e-19 Score=169.33 Aligned_cols=166 Identities=16% Similarity=0.150 Sum_probs=126.6
Q ss_pred ccCEEE-EeeeCC-HHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhc
Q psy11349 159 DYTHVL-TGYCRS-PQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELL 236 (360)
Q Consensus 159 ~~d~i~-~G~l~~-~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L 236 (360)
++++++ .|++.. +...+.+.++++.+++.+ +++++||+++.. .|..++..+.+.+.+++++|+++||+.|++.|
T Consensus 138 ~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~~--~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l 213 (332)
T 2qcv_A 138 RSKLLLVSGTALSKSPSREAVLKAIRLAKRND--VKVVFELDYRPY--SWETPEETAVYYSLVAEQSDIVIGTREEFDVL 213 (332)
T ss_dssp TEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTT--CEEEEECCCCGG--GSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHH
T ss_pred cCCEEEEeCccccCchhHHHHHHHHHHHHHCC--CEEEEcCcCchh--hcCCHHHHHHHHHHHHHhCCEEEccHHHHHHH
Confidence 477664 677642 333466778888888876 899999987532 33222222223356889999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHHH
Q psy11349 237 TKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLAY 315 (360)
Q Consensus 237 ~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a~ 315 (360)
+|.... ++..+++++|+++|++.|+|| +|++|++++. .+ ++.++++.++++.. |+||||+|+|+|+++
T Consensus 214 ~g~~~~--~~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~--~~----~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~ 282 (332)
T 2qcv_A 214 ENRTEK--GDNDETIRYLFKHSPELIVIK---HGVEGSFAYT--KA----GEAYRGYAYKTKVLKTFGAGDSYASAFLYA 282 (332)
T ss_dssp TTCSSC--CCHHHHHHHHTTSSCSEEEEE---CGGGCEEEEE--TT----SCEEEECCBCCCCSCCTTHHHHHHHHHHHH
T ss_pred hCCCcC--CCHHHHHHHHHHcCCCEEEEE---ECCcceEEEe--cC----CceEEcCCCCccccCCCCcHHHHHHHHHHH
Confidence 997531 244677888988999999999 8888987543 11 34677888888776 999999999999999
Q ss_pred HHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 316 ITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 316 L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
|++ |+++++|+++|+++++.++++
T Consensus 283 l~~-g~~~~~a~~~A~~~aa~~v~~ 306 (332)
T 2qcv_A 283 LIS-GKGIETALKYGSASASIVVSK 306 (332)
T ss_dssp HHT-TCCHHHHHHHHHHHHHHHHHC
T ss_pred HHc-CCCHHHHHHHHHHHHHHHHcc
Confidence 999 999999999999998877764
No 39
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=4e-19 Score=167.74 Aligned_cols=168 Identities=16% Similarity=0.125 Sum_probs=122.1
Q ss_pred cCCHHHHHHHH--HHhhhCCCCccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHH
Q psy11349 139 VITEQDFDELI--EGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYA 216 (360)
Q Consensus 139 ~l~~~~l~~ll--~~~~~~~~~~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~ 216 (360)
.+++++++... +.+. ..++++++...+ .+.+.++++.+++.+ +++++||+... ..+.+
T Consensus 117 ~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~---~~~~~~~~~~a~~~g--~~v~~Dp~~~~---------~~~~~- 176 (317)
T 2nwh_A 117 LFTPRRLKVRAVREAII-----ASDFLLCDANLP---EDTLTALGLIARACE--KPLAAIAISPA---------KAVKL- 176 (317)
T ss_dssp GCCHHHHTSHHHHHHHH-----HCSEEEEETTSC---HHHHHHHHHHHHHTT--CCEEEECCSHH---------HHGGG-
T ss_pred hCCHHHhhhhhhhhHhc-----cCCEEEEeCCCC---HHHHHHHHHHHHhcC--CeEEEeCCCHH---------HHHHH-
Confidence 35555554333 3344 477777643222 345667777777766 88999996321 01122
Q ss_pred HhhcccceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCc-eEEEEEec
Q psy11349 217 NELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSK-TTVSINIP 295 (360)
Q Consensus 217 ~~ll~~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~-~~~~~~~~ 295 (360)
+++++++|+++||+.|++.|+|.+ .+++.++++.|.+.|++.|+|| +|++|++++. . + ..++++.+
T Consensus 177 ~~ll~~~dil~~N~~E~~~l~g~~---~~~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~ 243 (317)
T 2nwh_A 177 KAALGDIDILFMNEAEARALTGET---AENVRDWPNILRKAGLSGGVVT---RGASEVVAFN---G----TEKAILHPPL 243 (317)
T ss_dssp TTTGGGCSEEEEEHHHHHHHHC--------CTTHHHHHHHTTCCCEEEE---ETTTEEEEEC---S----SCEEEECCCC
T ss_pred HHHhhhCeEecCCHHHHHHHhCCC---hhHHHHHHHHHHHcCCCEEEEE---ECCCcEEEEc---C----CCceEEeCCC
Confidence 367789999999999999999862 3456677888888999999999 8889986542 2 3 45677888
Q ss_pred ccCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 296 QFDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 296 ~v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+++.. |+||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 244 ~v~~vdt~GAGDaf~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~~ 288 (317)
T 2nwh_A 244 IREVKDVTGAGDAMASGYLAAIAE-GKTIREALRQGAAAAAITVQS 288 (317)
T ss_dssp SSSCSCCCCSSHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHSS
T ss_pred CccccCCCChhHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 87776 999999999999999999 999999999999998777753
No 40
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=99.78 E-value=3.5e-18 Score=160.76 Aligned_cols=157 Identities=15% Similarity=0.175 Sum_probs=119.7
Q ss_pred ccCEEEE-eeeC--CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCC-cCcHHHHHHhhcccce--EEeCCHHH
Q psy11349 159 DYTHVLT-GYCR--SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVP-EEVLPIYANELLSVAD--VICPNQFE 232 (360)
Q Consensus 159 ~~d~i~~-G~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~-~~~~~~~~~~ll~~~d--iitpN~~E 232 (360)
+++++++ |+.. ++...+.+.++++.+++ . ++||+++.. .|.. +...+.+ .++++++| +++||+.|
T Consensus 128 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~-----~-~~D~~~~~~--~~~~~~~~~~~~-~~~l~~~d~~il~~N~~E 198 (313)
T 2v78_A 128 NSRLVHSTGITLAISDNAKEAVIKAFELAKS-----R-SLDTNIRPK--LWSSLEKAKETI-LSILKKYDIEVLITDPDD 198 (313)
T ss_dssp TSSEEEEEHHHHHHCHHHHHHHHHHHHHCSS-----E-EEECCCCGG--GSSCHHHHHHHH-HHHHHHSCEEEEEECHHH
T ss_pred CCCEEEEcCchhhcChHHHHHHHHHHHHHHH-----h-CcCCcCChh--hcCCHHHHHHHH-HHHHHhcCeeEEECcHHH
Confidence 4777755 5543 34455667777776543 2 899987642 3321 1222333 46788999 99999999
Q ss_pred HHhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHH
Q psy11349 233 AELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAAL 311 (360)
Q Consensus 233 ~~~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~ 311 (360)
++.|+|.+ +..+++++|.+.|++.|+|| +|++|++++. + ++.++++.++++.. |+||||+|+|+
T Consensus 199 ~~~l~g~~-----~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~v~vvDttGAGDaF~ag 263 (313)
T 2v78_A 199 TKILLDVT-----DPDEAYRKYKELGVKVLLYK---LGSKGAIAYK---D----NVKAFKDAYKVPVEDPTGAGDAMAGT 263 (313)
T ss_dssp HHHHHSCC-----CHHHHHHHHHHTTEEEEEEE---CGGGCEEEEE---T----TEEEEECCCCCCCSCCTTHHHHHHHH
T ss_pred HHHHhCCC-----CHHHHHHHHHhCCCCEEEEE---ECCCCcEEee---C----CcEEEeCCCcCCccCCCCchHHHHHH
Confidence 99999862 45678888988899999999 8888987542 3 56778888888776 99999999999
Q ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 312 MLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 312 ~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
|+++|++ |+++++|+++|+++++.++++
T Consensus 264 ~~~~l~~-g~~~~~a~~~a~~~aa~~v~~ 291 (313)
T 2v78_A 264 FVSLYLQ-GKDIEYSLAHGIAASTLVITV 291 (313)
T ss_dssp HHHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHc-CCCHHHHHHHHHHHHHHHhcc
Confidence 9999999 999999999999998777753
No 41
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=99.78 E-value=2.7e-19 Score=170.60 Aligned_cols=162 Identities=19% Similarity=0.193 Sum_probs=126.9
Q ss_pred CccCEEEE-ee-eCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCC-cCcHHHHHHhhcccceEEeCCHHHHH
Q psy11349 158 MDYTHVLT-GY-CRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVP-EEVLPIYANELLSVADVICPNQFEAE 234 (360)
Q Consensus 158 ~~~d~i~~-G~-l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~-~~~~~~~~~~ll~~~diitpN~~E~~ 234 (360)
..++++++ |+ +.++...+.+.++++.+++.+ +++++||++++. .|.. ++..+.+ .++++++|+++||+.|++
T Consensus 140 ~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g--~~v~~Dp~~~~~--~~~~~~~~~~~~-~~ll~~~dil~~N~~Ea~ 214 (339)
T 1tyy_A 140 RQYEWFYFSSIGLTDRPAREACLEGARRMREAG--GYVLFDVNLRSK--MWGNTDEIPELI-ARSAALASICKVSADELC 214 (339)
T ss_dssp CTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTT--CEEEEECCCCGG--GCSCGGGHHHHH-HHHHHHCSEEEEEHHHHH
T ss_pred ccCCEEEEcchhhcCcccHHHHHHHHHHHHHcC--CEEEEeCCCCcc--ccCCHHHHHHHH-HHHHhhCCEEecCHHHHH
Confidence 35787776 44 245556678888899888876 899999987752 3322 2334444 478899999999999999
Q ss_pred hccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHH
Q psy11349 235 LLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALML 313 (360)
Q Consensus 235 ~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~ 313 (360)
.|+|.+ ++.+++++|.+.|++.|+|| +|++|++++. + ++.++++.++++.. |+||||+|+|+|+
T Consensus 215 ~l~g~~-----~~~~~~~~l~~~g~~~VvvT---~G~~G~~~~~---~----~~~~~~~~~~v~vvDttGAGDaF~ag~~ 279 (339)
T 1tyy_A 215 QLSGAS-----HWQDARYYLRDLGCDTTIIS---LGADGALLIT---A----EGEFHFPAPRVDVVDTTGAGDAFVGGLL 279 (339)
T ss_dssp HHHCCS-----SGGGGSSTTGGGTCSCEEEE---CGGGCEEEES---S----SCEEEECCCCCCCSCCTTHHHHHHHHHH
T ss_pred HHhCCC-----CHHHHHHHHHHcCCCEEEEE---ECCCceEEEe---C----CceEEcCCCCCCcCCCCCchHHHHHHHH
Confidence 999963 34566777888899999999 8888986542 3 56778888888776 9999999999999
Q ss_pred HHHHcCC-----CCHHHHHHHHHHHHHHHHHH
Q psy11349 314 AYITRTN-----HNVKESLERTIATIQSVLER 340 (360)
Q Consensus 314 a~L~~~g-----~~l~~A~~~A~a~~~~~l~~ 340 (360)
++|++ | .++++|+++|+++++.++++
T Consensus 280 ~~l~~-g~~~~~~~l~~a~~~A~a~aa~~v~~ 310 (339)
T 1tyy_A 280 FTLSR-ANCWDHALLAEAISNANACGAMAVTA 310 (339)
T ss_dssp HHHTT-SSSCCHHHHHHHHHHHHHHHHHGGGS
T ss_pred HHHHh-ccccccccHHHHHHHHHHHHHHHhCC
Confidence 99999 8 89999999999988766643
No 42
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=99.78 E-value=6e-18 Score=160.16 Aligned_cols=156 Identities=25% Similarity=0.269 Sum_probs=119.3
Q ss_pred ccCEEE-EeeeCCH-HHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhc
Q psy11349 159 DYTHVL-TGYCRSP-QLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELL 236 (360)
Q Consensus 159 ~~d~i~-~G~l~~~-~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L 236 (360)
..+++. .|++..+ ...+.+.++++.+++++ .+++||++++. .| +..+.+ .++++++|+++||+.|++.|
T Consensus 135 ~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~---~~~~d~~~~~~--~~---~~~~~~-~~~l~~~dil~~N~~E~~~l 205 (325)
T 3h49_A 135 QAKLLSLASIFNSPLLDGKALTEIFTQAKARQ---MIICADMIKPR--LN---ETLDDI-CEALSYVDYLFPNFAEAKLL 205 (325)
T ss_dssp GCSEEEEEEETTSTTSCHHHHHHHHHHHHHTT---CEEEEEECCCS--SC---CCHHHH-HHHHTTCSEEECBHHHHHHH
T ss_pred cCCEEEEecccCCcccCHHHHHHHHHHHHhcC---CEEEecCCchh--hh---hHHHHH-HHHHhhCCEEecCHHHHHHH
Confidence 467665 4554322 22356677888888765 57888876542 22 334444 36789999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEeccc-CCc-ccCchHHHHHHHHH
Q psy11349 237 TKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQF-DAS-FTGTGDLFAALMLA 314 (360)
Q Consensus 237 ~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v-~~~-t~GaGD~f~a~~~a 314 (360)
+|.+ +..++++.|.+.|++.|+|| +|++|++++. + ++.++++++++ +.+ |+||||+|+|+|++
T Consensus 206 ~g~~-----~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~~~~vvDttGAGDaf~ag~~~ 270 (325)
T 3h49_A 206 TGKE-----TLDEIADCFLACGVKTVVIK---TGKDGCFIKR---G----DMTMKVPAVAGITAIDTIGAGDNFASGFIA 270 (325)
T ss_dssp HTCS-----SHHHHHHHHHTTTCSEEEEE---CTTSCEEEEE---T----TEEEEECCCSSCCCSCCTTHHHHHHHHHHH
T ss_pred hCCC-----CHHHHHHHHHHcCCCEEEEE---eCCCCeEEEE---C----CeEEEecCcCCCCCcCCCChhHHHHHHHHH
Confidence 9973 45677888888999999999 9999987643 3 56677777765 566 99999999999999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHHHHH
Q psy11349 315 YITRTNHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 315 ~L~~~g~~l~~A~~~A~a~~~~~l~ 339 (360)
+|++ |+++++|+++|++++..+++
T Consensus 271 ~l~~-g~~~~~a~~~A~~~aa~~v~ 294 (325)
T 3h49_A 271 ALLE-GKNLRECARFANATAAISVL 294 (325)
T ss_dssp HHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred HHHc-CCCHHHHHHHHHHHHHHHHc
Confidence 9999 99999999999998766664
No 43
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=99.77 E-value=2.7e-18 Score=164.51 Aligned_cols=156 Identities=15% Similarity=0.183 Sum_probs=121.1
Q ss_pred ccCEE-EEeeeC-CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcc--cceEEeCCHHHHH
Q psy11349 159 DYTHV-LTGYCR-SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLS--VADVICPNQFEAE 234 (360)
Q Consensus 159 ~~d~i-~~G~l~-~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~--~~diitpN~~E~~ 234 (360)
.++++ +.|++. ++...+.+.++++.+++.+ +++++||... +..+...+.+ .++++ ++|+++||+.|++
T Consensus 171 ~~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~-----~~~~~~~~~l-~~ll~~~~~dil~~N~~Ea~ 242 (352)
T 4e3a_A 171 DAKVTYFEGYLWDPPRAKEAILDCARIAHQHG--REMSMTLSDS-----FCVDRYRGEF-LDLMRSGKVDIVFANRQEAL 242 (352)
T ss_dssp TEEEEEEEGGGGSSSSHHHHHHHHHHHHHHTT--CEEEEECCCH-----HHHHHHHHHH-HHHHHTTSCCEEEEEHHHHH
T ss_pred hCCEEEEeeeecCCchHHHHHHHHHHHHHHcC--CEEEEECCch-----hhHHHHHHHH-HHHhcccCCcEEEeCHHHHH
Confidence 46766 558774 4445678888899888877 8999999421 1111223344 46777 8999999999999
Q ss_pred hccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccC-Cc-ccCchHHHHHHH
Q psy11349 235 LLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFD-AS-FTGTGDLFAALM 312 (360)
Q Consensus 235 ~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~-~~-t~GaGD~f~a~~ 312 (360)
.|+|.+ +..++++.|.+ +++.|+|| +|++|++++. + ++.++++.++++ ++ |+||||+|+|+|
T Consensus 243 ~l~g~~-----~~~~a~~~l~~-~~~~vvvT---~G~~G~~~~~---~----~~~~~~~~~~v~~vvDttGAGDaF~agf 306 (352)
T 4e3a_A 243 SLYQTD-----DFEEALNRIAA-DCKIAAVT---MSENGAVILK---G----RERYYVNAIRIREVVDTTGAGDLFASGF 306 (352)
T ss_dssp HHTTCS-----CHHHHHHHHHH-HSSEEEEE---CGGGCEEEEE---T----TEEEEECCCCCSCCSCCTTHHHHHHHHH
T ss_pred HHhCCC-----CHHHHHHHHhc-CCCEEEEE---ECCCceEEEE---C----CEEEEECCccCCCCcCCCChHHHHHHHH
Confidence 999963 45667777765 68899999 8889987643 3 677888888876 45 999999999999
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHH
Q psy11349 313 LAYITRTNHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 313 ~a~L~~~g~~l~~A~~~A~a~~~~~l~ 339 (360)
+++|++ |+++++|+++|+++++.+++
T Consensus 307 l~~l~~-g~~l~~a~~~A~~aAa~~v~ 332 (352)
T 4e3a_A 307 LYGYTQ-GRSLEDCGKLGCLAAGIVIQ 332 (352)
T ss_dssp HHHHHT-TCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHHHHc
Confidence 999999 99999999999999877664
No 44
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=99.77 E-value=4.8e-18 Score=164.55 Aligned_cols=165 Identities=16% Similarity=0.168 Sum_probs=122.6
Q ss_pred ccCEEEE-eeeCCHHHHHHHHHHHHHHHh-cCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhc
Q psy11349 159 DYTHVLT-GYCRSPQLLSKIGELVKELKK-ANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELL 236 (360)
Q Consensus 159 ~~d~i~~-G~l~~~~~~~~i~~~l~~~~~-~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L 236 (360)
.++++++ |+... ...+.+.++++.+++ .+ +++++||... .| .++..+.+ .++++++|+++||+.|++.|
T Consensus 180 ~~~~v~~~g~~~~-~~~~~~~~~~~~a~~~~g--~~v~~d~~~~----~~-~~~~~~~l-~~ll~~~dil~pN~~Ea~~L 250 (383)
T 2abs_A 180 GALIFYATAYTLT-ATPKNALEVAGYAHGIPN--AIFTLNLSAP----FC-VELYKDAM-QSLLLHTNILFGNEEEFAHL 250 (383)
T ss_dssp TCCEEEEEGGGGT-TCHHHHHHHHHHHHTSTT--CEEEEECCCH----HH-HHHCHHHH-HHHHHTCSEEEEEHHHHHHH
T ss_pred cCCEEEEeeeccc-CCHHHHHHHHHHHHHhcC--CEEEEeCCcH----HH-HHHHHHHH-HHHHhhCCEEeCCHHHHHHH
Confidence 5787765 55542 224667788888887 66 7899998421 11 12333444 46889999999999999999
Q ss_pred cCCC-CCC-----------HHHHHHHHHHHHh------c-CCCEEEEeccccCCCceEEEEEe--eeccCCceEEEEEec
Q psy11349 237 TKIP-IKD-----------KASLLKTINVLHD------R-GIKTVVISSSELGPEKHLLGVAS--TVVGGSKTTVSINIP 295 (360)
Q Consensus 237 ~g~~-~~~-----------~~d~~~aa~~l~~------~-g~~~Vlvtg~~~g~~g~~~~~~~--~~~~~~~~~~~~~~~ 295 (360)
+|.. ..+ .+++.+++++|.+ . |++.|+|| +|++|++++... .+ ++.++++.+
T Consensus 251 ~g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT---~G~~Ga~~~~~~~~~~----~~~~~~~~~ 323 (383)
T 2abs_A 251 AKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMT---RGHNPVIAAEQTADGT----VVVHEVGVP 323 (383)
T ss_dssp HHHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEE---CTTSCEEEEEECTTSC----EEEEEECCC
T ss_pred hcccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEE---cCCCCeEEEEeecCCC----CeEEEecCc
Confidence 8753 221 4677888888887 3 89999999 899998765210 12 456677777
Q ss_pred cc---CCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 296 QF---DAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 296 ~v---~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
++ +.+ |+||||+|+|+|+++|++ |+++++|+++|++++..++++
T Consensus 324 ~v~~~~vvDttGAGDaF~ag~~~~l~~-g~~l~~al~~A~a~aa~~v~~ 371 (383)
T 2abs_A 324 VVAAEKIVDTNGAGDAFVGGFLYALSQ-GKTVKQCIMCGNACAQDVIQH 371 (383)
T ss_dssp CCCGGGCCCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred cCCcCCcCcCCChHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHhc
Confidence 66 555 999999999999999999 999999999999998777653
No 45
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=99.76 E-value=1.7e-19 Score=171.00 Aligned_cols=161 Identities=17% Similarity=0.155 Sum_probs=120.9
Q ss_pred ccCEEEEeee--CCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCC-cCcHHHHHHhhcccceEEeCCHHHHHh
Q psy11349 159 DYTHVLTGYC--RSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVP-EEVLPIYANELLSVADVICPNQFEAEL 235 (360)
Q Consensus 159 ~~d~i~~G~l--~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~-~~~~~~~~~~ll~~~diitpN~~E~~~ 235 (360)
++++++++.. ..+...+.+.++++.+++++ +++++||++++. .|.. ++..+.+ .++++++|+++||+.|++.
T Consensus 144 ~~~~v~~~g~~l~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~~--~~~~~~~~~~~~-~~~l~~~dil~~N~~E~~~ 218 (327)
T 3hj6_A 144 RSKVFHLSTFILSRKPARDTAIKAFNYAREQG--KIVCFDPCYRKV--LWPEGDDGAGVV-EEIISRADFVKPSLDDARH 218 (327)
T ss_dssp --CEEEEESHHHHSHHHHHHHHHHHHHHHHTT--CEEEEECCCCGG--GSCSSSCSHHHH-HHHHTTCSEECCBHHHHHH
T ss_pred cCCEEEECchHhcCchhHHHHHHHHHHHHHCC--CEEEEECCCchh--hcCCHHHHHHHH-HHHHhhCCEEecCHHHHHH
Confidence 4777765432 34455678888999998877 899999987652 3332 3445555 4788999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHH
Q psy11349 236 LTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLA 314 (360)
Q Consensus 236 L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a 314 (360)
|+|.+ +..+++++|.+.|++.|+|| +|++|++++. + ++.++++.++++.. |+||||+|+|+|++
T Consensus 219 l~g~~-----~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~v~vvdttGAGDaf~ag~~~ 283 (327)
T 3hj6_A 219 LFGPD-----SPENYVKRYLELGVKAVILT---LGEEGVIASD---G----EEIIRIPAFSEDAVDVTGAGDAFWSGFIC 283 (327)
T ss_dssp HHTTS-----CSSGGGGGGTTTTCSEEEEE---CSTTCEEEEC---S----SCEEESCSSTTC-----CCHHHHHHHHHH
T ss_pred HhCCC-----CHHHHHHHHHhCCCCEEEEE---ECCCceEEEe---C----CeeEEcCCcccccCCCcChhHHHHHHHHH
Confidence 99962 33456777888899999999 9999987643 3 66778888888877 99999999999999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 315 YITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 315 ~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+|++ |+++++|+++|+++++.++++
T Consensus 284 ~l~~-g~~~~~a~~~A~a~aa~~v~~ 308 (327)
T 3hj6_A 284 GLLD-GYTVKRSIKLGNGVAAFKIRG 308 (327)
T ss_dssp TTSS-CSTTHHHHHHHHCCCSSCC--
T ss_pred HHHc-CCCHHHHHHHHHHHHHHHhcC
Confidence 9999 999999999999887655543
No 46
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.76 E-value=2.2e-18 Score=162.35 Aligned_cols=151 Identities=21% Similarity=0.219 Sum_probs=115.6
Q ss_pred ccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccC
Q psy11349 159 DYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTK 238 (360)
Q Consensus 159 ~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g 238 (360)
.+++++++...+. +.+.++ +++.+ +++++||++.. +.. ..+++++|+++||+.|++.|+|
T Consensus 140 ~~~~v~~~~~~~~---~~~~~~---a~~~~--~~v~~Dp~~~~--------~~~----~~ll~~~dil~~N~~E~~~l~g 199 (311)
T 1vm7_A 140 ESDILLLQNEIPF---ETTLEC---AKRFN--GIVIFDPAPAQ--------GIN----EEIFQYLDYLTPNEKEIEALSK 199 (311)
T ss_dssp TCSEEEECSSSCH---HHHHHH---HHHCC--SEEEECCCSCT--------TCC----GGGGGGCSEECCBHHHHHHHHH
T ss_pred cCCEEEEeCCCCH---HHHHHH---HHHcC--CEEEEeCcchh--------hhh----HHHHhhCCEEeCCHHHHHHHhC
Confidence 4788876543332 233333 55555 89999997632 111 3677899999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHHHHH
Q psy11349 239 IPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLAYIT 317 (360)
Q Consensus 239 ~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a~L~ 317 (360)
.+..+.+++.+++++|.++|++.|++| +|++|++++. + ++.++++.++++.. |+||||+|+|+|+++|+
T Consensus 200 ~~~~~~~~~~~~~~~l~~~g~~~vvvT---~G~~G~~~~~---~----~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~ 269 (311)
T 1vm7_A 200 DFFGEFLTVEKAAEKFLELGVKNVIVK---LGDKGVLLVN---K----NEKKHFPTFKVKAVDTTAAGDVFNGAFAVALS 269 (311)
T ss_dssp HHHSCCCCHHHHHHHHHHTTCSEEEEE---CGGGCEEEEE---T----TEEEEECCCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred CCCCChhHHHHHHHHHHHcCCCEEEEE---ECCCCeEEEe---C----CceEEecCCCcccCCCCccHHHHHHHHHHHHH
Confidence 543333567788899999999999999 7888876542 3 56677888887766 99999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 318 RTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 318 ~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+ |+++++|+++|+++++.++++
T Consensus 270 ~-g~~~~~a~~~A~~~aa~~v~~ 291 (311)
T 1vm7_A 270 E-GKNPEEAVIFGTAAAAISVTR 291 (311)
T ss_dssp T-TCCHHHHHHHHHHHHHHHTTS
T ss_pred C-CCCHHHHHHHHHHHHHHHhCc
Confidence 9 999999999999998776653
No 47
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=99.76 E-value=4.4e-18 Score=159.83 Aligned_cols=156 Identities=22% Similarity=0.144 Sum_probs=120.9
Q ss_pred ccCEEEE-eeeC--CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHh
Q psy11349 159 DYTHVLT-GYCR--SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAEL 235 (360)
Q Consensus 159 ~~d~i~~-G~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~ 235 (360)
+++++++ |+.. ++...+.+.++++.+++.+ +++++||++++. .|..++..+.+ .++++++|+++||+.|++.
T Consensus 125 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~~--~~~~~~~~~~~-~~~l~~~dil~~N~~E~~~ 199 (309)
T 1v1a_A 125 GVRFLHLSGITPALSPEARAFSLWAMEEAKRRG--VRVSLDVNYRQT--LWSPEEARGFL-ERALPGVDLLFLSEEEAEL 199 (309)
T ss_dssp TCSEEEEETTGGGSCHHHHHHHHHHHHHHHTTT--CEEEEECCCCTT--TSCHHHHHHHH-HHHGGGCSEEEEEHHHHHH
T ss_pred CCCEEEEeCchhccCchHHHHHHHHHHHHHHcC--CEEEEeCCCCcc--cCCHHHHHHHH-HHHHHhCCEEECcHHHHHH
Confidence 5787754 6554 4566678888888888766 899999987652 33112233344 4788999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHH
Q psy11349 236 LTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLA 314 (360)
Q Consensus 236 L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a 314 (360)
|+|.+ .++++ +.|++.|+|| +|++|+++ . . + ++.++++.++++.. |+||||+|+|+|++
T Consensus 200 l~g~~-------~~~~~---~~g~~~vvvt---~G~~G~~~-~-~-~----~~~~~~~~~~v~vvdttGAGDaf~a~~~~ 259 (309)
T 1v1a_A 200 LFGRV-------EEALR---ALSAPEVVLK---RGAKGAWA-F-V-D----GRRVEGSAFAVEAVDPVGAGDAFAAGYLA 259 (309)
T ss_dssp HHSSH-------HHHHH---HTCCSEEEEE---CGGGCEEE-E-E-T----TEEEECCCCCCCCSCCTTHHHHHHHHHHH
T ss_pred HhCCH-------HHHHH---hcCCCEEEEE---ecCCCeeE-e-c-C----CcEEEeCCCCCCcCCCCCchHHHHHHHHH
Confidence 99862 33444 6789999999 88888865 3 1 2 45677888888776 99999999999999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 315 YITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 315 ~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+|++ |+++++|+++|+++++.++++
T Consensus 260 ~l~~-g~~~~~a~~~a~~~aa~~v~~ 284 (309)
T 1v1a_A 260 GAVW-GLPVEERLRLANLLGASVAAS 284 (309)
T ss_dssp HHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 9999 999999999999998777754
No 48
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=99.76 E-value=9.3e-19 Score=166.96 Aligned_cols=161 Identities=9% Similarity=0.157 Sum_probs=122.5
Q ss_pred ccCEEEE-eeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhcc
Q psy11349 159 DYTHVLT-GYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLT 237 (360)
Q Consensus 159 ~~d~i~~-G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~ 237 (360)
+++++++ |+... ...+.+.++++.+++.+ +++++||... .| .++..+.+ .++++++|+++||+.|++.|+
T Consensus 161 ~~~~v~~~g~~~~-~~~~~~~~~~~~a~~~g--~~v~~d~~~~----~~-~~~~~~~~-~~~l~~~dil~~N~~E~~~l~ 231 (345)
T 1bx4_A 161 KARVCYIAGFFLT-VSPESVLKVAHHASENN--RIFTLNLSAP----FI-SQFYKESL-MKVMPYVDILFGNETEAATFA 231 (345)
T ss_dssp HCSEEEEEGGGGG-TCHHHHHHHHHHHHHTT--CEEEEECCSH----HH-HHHTHHHH-HHHGGGCSEEEEEHHHHHHHH
T ss_pred hCCEEEEEEEecc-CCHHHHHHHHHHHHHcC--CEEEEeCCcH----HH-HHHHHHHH-HHHhccCCEEeCCHHHHHHHh
Confidence 4777765 65442 23466777888888876 7899998421 11 12233444 468899999999999999998
Q ss_pred CCCCCCHHHHHHHHHHHHh------cCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEeccc---CCc-ccCchHH
Q psy11349 238 KIPIKDKASLLKTINVLHD------RGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQF---DAS-FTGTGDL 307 (360)
Q Consensus 238 g~~~~~~~d~~~aa~~l~~------~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v---~~~-t~GaGD~ 307 (360)
|....+.+++.+++++|.+ .|++.|+|| +|++|++++. + ++.++++.+++ +.. |+||||+
T Consensus 232 g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~v~~~~vvDttGAGDa 301 (345)
T 1bx4_A 232 REQGFETKDIKEIAKKTQALPKMNSKRQRIVIFT---QGRDDTIMAT---E----SEVTAFAVLDQDQKEIIDTNGAGDA 301 (345)
T ss_dssp HHTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEE---ETTEEEEEEC---S----SCEEEECCCCCCCTTCCCHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHhcccccccCCCEEEEE---eCCCCeEEEE---C----CeEEEEeccccCcCccccCCCcchH
Confidence 7543333567788889988 589999999 8999986542 3 56777888776 555 9999999
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q psy11349 308 FAALMLAYITRTNHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 308 f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~ 339 (360)
|+|+|+++|++ |+++++|+++|+++++.+++
T Consensus 302 f~ag~~~~l~~-g~~~~~a~~~A~~~aa~~v~ 332 (345)
T 1bx4_A 302 FVGGFLSQLVS-DKPLTECIRAGHYAASIIIR 332 (345)
T ss_dssp HHHHHHHHHTT-TCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHh
Confidence 99999999999 99999999999998876664
No 49
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=99.76 E-value=6.8e-18 Score=158.61 Aligned_cols=156 Identities=15% Similarity=0.145 Sum_probs=119.1
Q ss_pred ccCEEEE-eeeC--CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcc--cceEEeCCHHHH
Q psy11349 159 DYTHVLT-GYCR--SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLS--VADVICPNQFEA 233 (360)
Q Consensus 159 ~~d~i~~-G~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~--~~diitpN~~E~ 233 (360)
+++++++ |+.. ++...+.+.++++.+++ . ++||+++.. .|..++..+.+ .++++ ++|+++||+.|+
T Consensus 128 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~-----~-~~D~~~~~~--~~~~~~~~~~~-~~~l~~~~~dil~~N~~E~ 198 (311)
T 2dcn_A 128 SADLVHSSGITLAISSTAKEAVYKAFEIASN-----R-SFDTNIRLK--LWSAEEAKREI-LKLLSKFHLKFLITDTDDS 198 (311)
T ss_dssp TCSEEEEEHHHHHSCHHHHHHHHHHHHHCSS-----E-EEECCCCTT--TSCHHHHHHHH-HHHHHHCCEEEEEEEHHHH
T ss_pred CCCEEEEeCcccccChHHHHHHHHHHHHHHH-----h-CcCccCchh--hCChHHHHHHH-HHHHhhcCCcEEECCHHHH
Confidence 4787755 5543 35556677777776543 2 899987642 33212223334 46888 999999999999
Q ss_pred HhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHH
Q psy11349 234 ELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALM 312 (360)
Q Consensus 234 ~~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~ 312 (360)
+.|+|.+ +..+++++|.+. ++.|+|| +|++|++++. + ++.++++.++++.. |+||||+|+|+|
T Consensus 199 ~~l~g~~-----~~~~~~~~l~~~-~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~v~vvdttGAGDaf~a~~ 262 (311)
T 2dcn_A 199 KIILGES-----DPDKAAKAFSDY-AEIIVMK---LGPKGAIVYY---D----GKKYYSSGYQVPVEDVTGAGDALGGTF 262 (311)
T ss_dssp HHHHSCC-----CHHHHHHHHTTT-EEEEEEE---EETTEEEEEE---T----TEEEEEECCCCCCSCCTTHHHHHHHHH
T ss_pred HHHhCCC-----CHHHHHHHHHHh-CCEEEEE---ECCCCcEEEe---C----CcEEEeCCccccccCCCCchHHHHHHH
Confidence 9999862 566788888887 8899999 8889987543 3 66778888888876 999999999999
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 313 LAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 313 ~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+++|++ |+++++|+++|+++++.++++
T Consensus 263 ~~~l~~-g~~~~~a~~~a~~~aa~~v~~ 289 (311)
T 2dcn_A 263 LSLYYK-GFEMEKALDYAIVASTLNVMI 289 (311)
T ss_dssp HHHHTT-TCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHHHhcc
Confidence 999999 999999999999988766643
No 50
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=9.9e-18 Score=160.03 Aligned_cols=148 Identities=16% Similarity=0.102 Sum_probs=118.1
Q ss_pred ccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHh-hcccceEEeCCHHHHHhcc
Q psy11349 159 DYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANE-LLSVADVICPNQFEAELLT 237 (360)
Q Consensus 159 ~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~-ll~~~diitpN~~E~~~L~ 237 (360)
.+++++++... + +.+.++++.+++.+ +++++||.. + .+.+ .+ +++++|+++||+.|++.|+
T Consensus 157 ~~~~v~~~~~~-~---~~~~~~~~~a~~~g--~~v~~Dp~~------~-----~~~~-~~~ll~~~dil~~N~~Ea~~l~ 218 (343)
T 2rbc_A 157 LFDAVLVDVRW-P---ELALDVLTVARALG--KPAILDGDV------A-----PVET-LEGLAPAATHIVFSEPAATRLT 218 (343)
T ss_dssp TCSEEEECSSS-H---HHHHHHHHHHHHTT--CCEEEEECS------C-----CHHH-HHHHGGGCSEEEEEHHHHHHHH
T ss_pred CCCEEEEcCCC-H---HHHHHHHHHHHHCC--CEEEEECCc------c-----cccc-HHHHHhcCCEEEeCHHHHHHHc
Confidence 47888765432 2 35667777777766 889999942 1 1233 35 7899999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCC-CEEEEeccccCCCceEEEEEeeeccCCc--eEEEEEecccCCc-ccCchHHHHHHHH
Q psy11349 238 KIPIKDKASLLKTINVLHDRGI-KTVVISSSELGPEKHLLGVASTVVGGSK--TTVSINIPQFDAS-FTGTGDLFAALML 313 (360)
Q Consensus 238 g~~~~~~~d~~~aa~~l~~~g~-~~Vlvtg~~~g~~g~~~~~~~~~~~~~~--~~~~~~~~~v~~~-t~GaGD~f~a~~~ 313 (360)
|.+ ++.++++.|.+.|+ +.|+|| +|++|++++. + + +.++++.++++.. |+||||+|+|+|+
T Consensus 219 g~~-----~~~~~~~~l~~~g~~~~VvvT---~G~~G~~~~~---~----~~~~~~~~~~~~v~vvDttGAGDaF~ag~~ 283 (343)
T 2rbc_A 219 GLE-----TVKDMLPVLHARYPQTFIAVT---AGPAGCWWTE---A----DDPTVHFQTTMQVEAVDTLAAGDIFHGTFA 283 (343)
T ss_dssp CCS-----SHHHHHHHHHHHSTTSEEEEE---CGGGCEEEEC---T----TCCCEEEECCCCCCCSCCTTHHHHHHHHHH
T ss_pred CCC-----CHHHHHHHHHHhCCCceEEEE---ECCcceEEEe---C----CCceeEEecCCCCccccCCChHHHHHHHHH
Confidence 963 56778888988898 999999 8888986542 3 4 6778888888776 9999999999999
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 314 AYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 314 a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
++|++ |+++++|+++|+++++.++++
T Consensus 284 ~~l~~-g~~~~~a~~~A~~~aa~~v~~ 309 (343)
T 2rbc_A 284 LAMAE-GMQSRAAVRLSSVAAALKCTV 309 (343)
T ss_dssp HHHHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHc-CCCHHHHHHHHHHHHHHHhCC
Confidence 99999 999999999999998777653
No 51
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=99.74 E-value=5.8e-18 Score=168.48 Aligned_cols=245 Identities=13% Similarity=0.109 Sum_probs=163.3
Q ss_pred EEEEEEceec-----ceeeechHHHHHHHHHHHhhcccccccccccceeeecccccc-cccccCCchhhhhcCeeeeeee
Q psy11349 49 TVSINIPQFD-----ASFTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER-TAQSFPNKGQYEVLGFEVDAIN 122 (360)
Q Consensus 49 ~~~~~~p~~~-----~~f~G~gd~~~~~l~~~~~~~~~~~~~~~~~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~~~i~ 122 (360)
..+|+||... .++....|+. .++..+..+.||+..++|++|+|+..+ +++.++++++| +.|...+.+.
T Consensus 205 v~dIGip~~~~~~~~~~~~~~~~~~-----~~lp~r~~~~hKg~~G~vlvigGs~~~~GA~~Laa~aAl-r~GaGlv~~~ 278 (502)
T 3rss_A 205 VANIGHPVHLINSINRYVITREMVR-----SLLPERPRDSHKGTYGKVLIIAGSRLYSGAPVLSGMGSL-KVGTGLVKLA 278 (502)
T ss_dssp EECCSCCHHHHTTCSEEECCHHHHH-----HHSCCCCSSCCGGGGCEEEEECCCSSCCSHHHHHHHHHH-HTTCSEEEEE
T ss_pred EEcCCCChHHhhccchhhcCHHHHH-----HhcCCCCCCCCCCCCceEEEEECCCCCCCHHHHHHHHHH-HhCcCeEEEE
Confidence 4567777532 3455555543 344788889999999999999999888 99999999999 5699888877
Q ss_pred eeee------cCCCCC--Cccc--cccCCHHHHHHHHHHhhhCCCCccCEEEEeeeC-C-HHHHHHHHHHHHHHHhcCCC
Q psy11349 123 TVQF------SNHSGY--GHLK--GKVITEQDFDELIEGLKMNDLMDYTHVLTGYCR-S-PQLLSKIGELVKELKKANPT 190 (360)
Q Consensus 123 t~~~------s~~~~~--~~~~--g~~l~~~~l~~ll~~~~~~~~~~~d~i~~G~l~-~-~~~~~~i~~~l~~~~~~~~~ 190 (360)
++.. +..|+. ..+. ...++.++++.+.+.++ ++|++++|+.. . +...+.+.+++ ++.+
T Consensus 279 ~~~~~~~~~~~~~PE~m~~~~~~~~~~~~~~~~~~~~~~~~-----~~davviGpGlg~~~~~~~~~~~~l---~~~~-- 348 (502)
T 3rss_A 279 VPFPQNLIATSRFPELISVPIDTEKGFFSLQNLQECLELSK-----DVDVVAIGPGLGNNEHVREFVNEFL---KTLE-- 348 (502)
T ss_dssp EETTTHHHHHHHCTTSEEEEECCSSSSCCGGGHHHHHHHHT-----TCSEEEECTTCCCSHHHHHHHHHHH---HHCC--
T ss_pred EcHHHHHHHhhcCCeEEEecccccccccchhhHHHHHHHhc-----cCCEEEEeCCCCCCHHHHHHHHHHH---HhcC--
Confidence 6521 112221 1111 12344456666666665 58999999863 3 33333333333 3334
Q ss_pred ceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccCCCCCCH-HHHHHHHHHHHhcCCCEEEEecccc
Q psy11349 191 LMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKIPIKDK-ASLLKTINVLHDRGIKTVVISSSEL 269 (360)
Q Consensus 191 ~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g~~~~~~-~d~~~aa~~l~~~g~~~Vlvtg~~~ 269 (360)
+|+|+||.... +.. .+.+ +..+..++||||..|+++|+|.+..+. ++ .++++++.+++...|++||.+
T Consensus 349 ~pvVlDadgl~----~l~---~~ll--~~~~~~~vlTPN~~E~~~L~g~~~~~~~~d-~~aa~~la~~~~~~VvlKG~~- 417 (502)
T 3rss_A 349 KPAVIDADAIN----VLD---TSVL--KERKSPAVLTPHPGEMARLVKKTVGDVKYN-YELAEEFAKENDCVLVLKSAT- 417 (502)
T ss_dssp SCEEECHHHHH----TCC---HHHH--HHCSSCEEECCCHHHHHHHHTCCHHHHTTC-HHHHHHHHHHHTSEEEECSSS-
T ss_pred CCEEEeCcccc----hhc---HHHH--hccCCCEEEeCCHHHHHHHhCCCccchHHH-HHHHHHHHHHcCCEEEEeCCC-
Confidence 79999996432 111 1111 223568999999999999999764322 34 678888887655677778532
Q ss_pred CCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q psy11349 270 GPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIAT 333 (360)
Q Consensus 270 g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~ 333 (360)
.++. . . + ..++.....+.+ ++|+||+|+|.++++|++ |.++.+|+..|..+
T Consensus 418 ----~vi~--~-~----~-~~~~~~~g~~~~at~GsGD~Lag~iaa~lA~-g~~~~~Aa~~A~~~ 469 (502)
T 3rss_A 418 ----TIVT--D-G----E-KTLFNITGNTGLSKGGSGDVLTGMIAGFIAQ-GLSPLEASTVSVYL 469 (502)
T ss_dssp ----EEEE--C-S----S-CEEEECCCCGGGSSTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHH
T ss_pred ----eEEE--c-C----C-EEEEECCCCCccccCCchHHHHHHHHHHHhC-CCCHHHHHHHHHHH
Confidence 2222 2 2 4 344555566666 899999999999999999 99999999888644
No 52
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=99.74 E-value=7.3e-18 Score=155.81 Aligned_cols=228 Identities=11% Similarity=0.063 Sum_probs=148.1
Q ss_pred HHHhhcccccccccccceeeecccccc-cccccCCchhhhhcCeeeeeeeeeeecCCCCCCccccccC-C-HHHHHHHHH
Q psy11349 74 AYITRTNHNVKESLERTIATIQSVLER-TAQSFPNKGQYEVLGFEVDAINTVQFSNHSGYGHLKGKVI-T-EQDFDELIE 150 (360)
Q Consensus 74 ~~~~~~~~~~~~~~~~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~~~i~t~~~s~~~~~~~~~g~~l-~-~~~l~~ll~ 150 (360)
.++.++..+.||+..++|++|+|+..+ +++.+++++++ +.|.+.+.+.+.. +..+-.....++.+ . ...+..
T Consensus 16 ~~lp~r~~~~hKg~~G~vlvigGs~~~~GA~~laa~aAl-r~GaGlv~~~~~~-~~~~~~~~~~Pe~m~~~~~~~~~--- 90 (279)
T 3rpz_A 16 ATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAM-RSGLGKLVIGTSE-NVIPLIVPVLPEATYWRDGWKKA--- 90 (279)
T ss_dssp HHCCCCCSSCCGGGGCEEEEECCBTTBCHHHHHHHHHHH-TTTCSEEEEEECT-TTHHHHTTTCTTCEEEETHHHHT---
T ss_pred hhCCCCCCcCCCcCCCEEEEEeCCCCCCcHHHHHHHHHH-HhCCCeEEEEecH-HHHHHHHhcCCeeEEccccccch---
Confidence 345788889999999999999999888 99999989999 5699888776542 01000111111111 0 111110
Q ss_pred HhhhCCCCccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCH
Q psy11349 151 GLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQ 230 (360)
Q Consensus 151 ~~~~~~~~~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~ 230 (360)
... ..+.++|++.+|+..... +...++++.+.+.+ .|+|+|+.- +.. +.+ ......++||||.
T Consensus 91 ~~~-~~l~~~davviGPGlg~~--~~~~~~~~~~l~~~--~p~VlDAda-----l~~--~~l-----~~~~~~~vlTPN~ 153 (279)
T 3rpz_A 91 ADA-QLEETYRAIAIGPGLPQT--ESVQQAVDHVLTAD--CPVILDAGA-----LAK--RTY-----PKREGPVILTPHP 153 (279)
T ss_dssp TTS-CCSSCCSEEEECTTCCCC--HHHHHHHHHHTTSS--SCEEECGGG-----CCS--CCC-----CCCSSCEEECCCH
T ss_pred hhH-hhccCCCEEEECCCCCCC--HHHHHHHHHHHhhC--CCEEEECCc-----cch--hhh-----hhccCCEEEecCH
Confidence 010 011478999999874321 11234445444444 689999832 111 100 1124679999999
Q ss_pred HHHHhccCCCCCCH-HHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHH
Q psy11349 231 FEAELLTKIPIKDK-ASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLF 308 (360)
Q Consensus 231 ~E~~~L~g~~~~~~-~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f 308 (360)
.|+++|+|.+..+. ++..+++++|.+++...|++||.+ .++. . . ++.++++....+.+ ++|+||+|
T Consensus 154 ~E~~~L~g~~~~~~~~d~~~aa~~la~~~~~~VvlKG~~-----~vi~--~-~----~g~~~~~~~g~~~~at~GtGD~L 221 (279)
T 3rpz_A 154 GEFFRMTGVPVNELQKKRAEYAKEWAAQLQTVIVLKGNQ-----TVIA--F-P----DGDCWLNPTGNGALAKGGTGDTL 221 (279)
T ss_dssp HHHHHHHCCCHHHHTTSHHHHHHHHHHHHTSEEEECSTT-----CEEE--C-T----TSCEEECCCCCGGGCSTTHHHHH
T ss_pred HHHHHHhCCCccchHHHHHHHHHHHHHHcCeEEEEeCCC-----cEEE--C-C----CceEEEeCCCCCCCCCCChHHHH
Confidence 99999999865332 467788889987655688888642 2222 2 2 33455666666667 88999999
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Q psy11349 309 AALMLAYITRTNHNVKESLERTIATIQSV 337 (360)
Q Consensus 309 ~a~~~a~L~~~g~~l~~A~~~A~a~~~~~ 337 (360)
+|.++++|++ |.++.+|+..|. |+++.
T Consensus 222 ag~iaa~lA~-g~~~~~A~~~a~-~lh~~ 248 (279)
T 3rpz_A 222 TGMILGMLCC-HEDPKHAVLNAV-YLHGA 248 (279)
T ss_dssp HHHHHHHHHH-CSSHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHC-CCCHHHHHHHHH-HHHHH
Confidence 9999999999 999999999885 44443
No 53
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=99.74 E-value=1.6e-17 Score=160.23 Aligned_cols=180 Identities=14% Similarity=0.165 Sum_probs=125.6
Q ss_pred ccCCHHHHH--HHHHHhhhCCCCccCEEEE-eeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHH
Q psy11349 138 KVITEQDFD--ELIEGLKMNDLMDYTHVLT-GYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPI 214 (360)
Q Consensus 138 ~~l~~~~l~--~ll~~~~~~~~~~~d~i~~-G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~ 214 (360)
..+.+++++ .+.+.++ .++++++ |++. ....+.+.++++.+++++ .++++|+... +..+...+.
T Consensus 162 ~~l~~~~i~~~~~~~~i~-----~a~~~~~~g~~~-~~~~~~~~~~~~~a~~~g--~~v~ldls~~-----~~~~~~~~~ 228 (372)
T 3uq6_A 162 CDLSLAHIEQPHVWSLVE-----KAQVYYIAGFVI-NTCYEGMLKIAKHSLENE--KLFCFNLSAP-----FLSQFNTKE 228 (372)
T ss_dssp GGCCHHHHTSHHHHHHHH-----HCSEEEEEGGGH-HHHHHHHHHHHHHHHHTT--CEEEEECCCH-----HHHHHCHHH
T ss_pred hhcchhhhhhhhHHHHhh-----cccEEEEecccc-cccHHHHHHHHHHHHHcC--CeEeeccccc-----hhhhhhHHH
Confidence 345566553 2333344 4666654 5553 344677788889898877 8899998421 111122334
Q ss_pred HHHhhcccceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHh-------cCCCEEEEeccccCCCceEEEEEeeeccCCc
Q psy11349 215 YANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHD-------RGIKTVVISSSELGPEKHLLGVASTVVGGSK 287 (360)
Q Consensus 215 ~~~~ll~~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~-------~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~ 287 (360)
+ .++++++|+++||+.|++.|++......++..++++.+.+ .+.+.|++| +|++|+++... .. .
T Consensus 229 l-~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT---~G~~G~~~~~~-~~----~ 299 (372)
T 3uq6_A 229 V-DEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKRKRLVIIT---RGKNPLLYTDS-SD----S 299 (372)
T ss_dssp H-HHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEE---ETTEEEEEEES-SC----S
T ss_pred H-HHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHHHHHHhhhhhhhhcCCceEEEEc---CCCCceEEecC-CC----c
Confidence 4 4678999999999999999987654344577777777765 356789999 99999876531 11 2
Q ss_pred eEEEEEecc---cCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 288 TTVSINIPQ---FDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 288 ~~~~~~~~~---v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
....++.+. .+++ |+||||+|+|+|+++|++ |+++++|+++|+.+++.++++
T Consensus 300 ~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~-g~~l~~a~~~a~~aAa~vv~~ 355 (372)
T 3uq6_A 300 EIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIR-GKPMITSLHAAVKAAAYIICR 355 (372)
T ss_dssp SCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred eeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHcC
Confidence 223343333 2345 999999999999999999 999999999999998888864
No 54
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=99.74 E-value=2.1e-17 Score=154.63 Aligned_cols=151 Identities=21% Similarity=0.201 Sum_probs=116.1
Q ss_pred cCCHHHHHHHHHHhhhCCCCccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHh
Q psy11349 139 VITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANE 218 (360)
Q Consensus 139 ~l~~~~l~~ll~~~~~~~~~~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ 218 (360)
.+++++++.+.+.++ .+++++++...+ .+.+.++++.+++.+ +++++||.... +.. ..
T Consensus 116 ~l~~~~~~~~~~~~~-----~~~~v~~~g~~~---~~~~~~~~~~a~~~g--~~v~~D~~~~~--------~~~----~~ 173 (299)
T 3ikh_A 116 TFSLDEMIPHMADAV-----AGDILLQQGNFS---LDKTRALFQYARSRG--MTTVFNPSPVN--------PDF----CH 173 (299)
T ss_dssp HCCHHHHGGGGTTCC-----TTCEEEECSCSC---HHHHHHHHHHHHHTT--CEEEECCCSCC--------GGG----GG
T ss_pred cCCHHHHHHHHhhhc-----cCCEEEECCCCC---HHHHHHHHHHHHHcC--CEEEEccccch--------hhH----HH
Confidence 455555544333333 688887653333 345667777788776 89999995331 111 36
Q ss_pred hcccceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccC
Q psy11349 219 LLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFD 298 (360)
Q Consensus 219 ll~~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~ 298 (360)
+++++|+++||+.|++.|+| .|++.|+|| +|++|++++. + ++.++++.++++
T Consensus 174 ll~~~dil~~N~~E~~~l~g------------------~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~v~ 225 (299)
T 3ikh_A 174 LWPLIDIAVVNESEAELLQP------------------YGVKTLVIT---QGAAGAWLVQ---E----GQRQFCPAVPAE 225 (299)
T ss_dssp CGGGCSEEEEEHHHHHHHCC------------------CSCSEEEEE---CGGGCEEEEC---S----SCEEEECCCCCC
T ss_pred HHhhCCEEEecHHHHHHHhc------------------CCCCEEEEE---ECCCceEEEe---C----CceEEeCCCCCc
Confidence 78899999999999999987 578999999 8889986542 3 667888888887
Q ss_pred Cc-ccCchHHHHH-HHHHHHHcCCCCHHH-HHHHHHHHHHHHHHH
Q psy11349 299 AS-FTGTGDLFAA-LMLAYITRTNHNVKE-SLERTIATIQSVLER 340 (360)
Q Consensus 299 ~~-t~GaGD~f~a-~~~a~L~~~g~~l~~-A~~~A~a~~~~~l~~ 340 (360)
.. |+||||+|+| +|+++|++ |+++++ |+++|+++++.++++
T Consensus 226 vvDttGAGDaf~a~~~~~~l~~-g~~~~~~a~~~a~~~aa~~v~~ 269 (299)
T 3ikh_A 226 ALDTTGAGDTFLAVMLASALLR-GVAPDALALAHASRAAAITVSR 269 (299)
T ss_dssp CSCCTTHHHHHHHHHHHHHHHT-TSSSCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCCchHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHhCC
Confidence 77 9999999999 99999999 999999 999999998777754
No 55
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=99.72 E-value=1.1e-16 Score=152.96 Aligned_cols=165 Identities=15% Similarity=0.109 Sum_probs=110.8
Q ss_pred ccCEEEEe-ee--CCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHh
Q psy11349 159 DYTHVLTG-YC--RSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAEL 235 (360)
Q Consensus 159 ~~d~i~~G-~l--~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~ 235 (360)
.++++.++ +. .++...+.+.++++.++++| +++++||++++. +|..++..+.+ .++++++|+++||+.|++.
T Consensus 150 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g--~~v~~D~n~r~~--lw~~~~~~~~~-~~~l~~~dil~~N~~Ea~~ 224 (351)
T 4gm6_A 150 GIRVLHVSGITIALSTFWLEMVVKIIREAKRNG--IKISFDMNYRAK--LWELEAAKRAY-QQLLPLVDYCSAGQMDAVA 224 (351)
T ss_dssp TEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTT--CEEEEECCCCTT--TSCHHHHHHHH-HHHGGGCSEEECCHHHHHH
T ss_pred hcccceecccchhhchhHHHHHHHHHHHHHHcC--CCcccCCCcCch--hhhhhhHHHHH-HHHHHhCCccccCHHHHHH
Confidence 46767654 32 25666788889999999988 899999998864 44333444444 5789999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHh-----cCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEeccc-CCc-ccCchHHH
Q psy11349 236 LTKIPIKDKASLLKTINVLHD-----RGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQF-DAS-FTGTGDLF 308 (360)
Q Consensus 236 L~g~~~~~~~d~~~aa~~l~~-----~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v-~~~-t~GaGD~f 308 (360)
|+|......+ ..++...... .+.+.++++ .+..+.-..+.. + ++.++.+.+++ +++ |+||||+|
T Consensus 225 l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~~~~~~-~----~~~~~~~~~~~~~VvDttGAGDaF 295 (351)
T 4gm6_A 225 FFEISSETTD-YYQAMHDKYPNIELFYATKRTVIS---ASHHLLQGHLWT-Q----GECWESEEYAIYPIVDRVGGGDAY 295 (351)
T ss_dssp TSCCCTTCSC-HHHHHHHHCTTCCEEEEEEEEEEE---TTEEEEEEEEEE-T----TEEEEEEEEEECSCSCCTTHHHHH
T ss_pred HhCCCCchhH-HHHHHHhhhhhhhhhhccccceee---eccCCceEEEEe-C----CceEEeCCCCCCCcCCCCChhHHH
Confidence 9997543322 2222222211 122234444 332221111112 3 56666665554 566 99999999
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Q psy11349 309 AALMLAYITRTNHNVKESLERTIATIQSVL 338 (360)
Q Consensus 309 ~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l 338 (360)
+|+|+++|++ |+++++|+++|++++..++
T Consensus 296 ~ag~l~~l~~-g~~~~~al~~A~aaaal~v 324 (351)
T 4gm6_A 296 TAAVLHGILS-EWRPDETVKFATAAAGLKH 324 (351)
T ss_dssp HHHHHHHHHT-TCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHh
Confidence 9999999999 9999999999999864443
No 56
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=99.72 E-value=1.2e-17 Score=157.21 Aligned_cols=152 Identities=23% Similarity=0.270 Sum_probs=117.2
Q ss_pred ccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccC
Q psy11349 159 DYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTK 238 (360)
Q Consensus 159 ~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g 238 (360)
+++++++|.+... ...++++.+ +.+ .++++||... | .+...+.+ .++++++|+++||+.|++.|+|
T Consensus 119 ~~~~v~~~~~~~~----~~~~~~~~~-~~~--~~v~~Dp~~~-----~-~~~~~~~~-~~~l~~~dil~~N~~E~~~l~g 184 (313)
T 3kd6_A 119 DSKFVCLGNIDPE----LQLKVLDQI-DDP--KLVVCDTMNF-----W-IEGKPEEL-KKVLARVDVFIVNDSEARLLSG 184 (313)
T ss_dssp TCSEEEECSSCHH----HHHHHHTTC-SSC--SEEEEECCHH-----H-HHHCHHHH-HHHHTTCSEEEEEHHHHHHHHS
T ss_pred cCCEEEEcCCCHH----HHHHHHHHH-hhC--CEEEEcChhh-----h-hhhhHHHH-HHHHhcCCEEEeCHHHHHHHhC
Confidence 5889998887532 223445544 333 7899999321 1 12233444 4688999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEeccc-CCc-ccCchHHHHHHHHHHH
Q psy11349 239 IPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQF-DAS-FTGTGDLFAALMLAYI 316 (360)
Q Consensus 239 ~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v-~~~-t~GaGD~f~a~~~a~L 316 (360)
.+ +..++++.|.+.|++.|+|| +|++|++++. + ++.++++.+++ ++. |+||||+|+|+|+++|
T Consensus 185 ~~-----~~~~~~~~l~~~g~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l 249 (313)
T 3kd6_A 185 DP-----NLVKTARIIREMGPKTLIIK---KGEHGALLFT---D----NGIFAAPAFPLESIYDPTGAGDTFAGGFIGHL 249 (313)
T ss_dssp CS-----CHHHHHHHHHTTSCSEEEEE---CTTSCEEEEE---T----TEEEEECCCTTCCCSCCTTHHHHHHHHHHHHH
T ss_pred CC-----CHHHHHHHHHHcCCCEEEEe---eCCCcEEEEE---C----CceEEeCCCCCCCcCCCCCccHHHHHHHHHHH
Confidence 63 56788899999999999999 9999987643 3 66778888887 566 9999999999999999
Q ss_pred HcCCC-----CHHHHHHHHHHHHHHHHHH
Q psy11349 317 TRTNH-----NVKESLERTIATIQSVLER 340 (360)
Q Consensus 317 ~~~g~-----~l~~A~~~A~a~~~~~l~~ 340 (360)
++ |. ++++|+++|+++++.++++
T Consensus 250 ~~-g~~~~~~~l~~a~~~a~~~aa~~v~~ 277 (313)
T 3kd6_A 250 AR-CGNTSEAEMRKAVLYGSAMASFCVEQ 277 (313)
T ss_dssp HH-HCCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred Hc-CCCccccCHHHHHHHHHHHHHHHHee
Confidence 99 98 8999999999987776653
No 57
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.71 E-value=4.5e-16 Score=145.53 Aligned_cols=158 Identities=13% Similarity=0.084 Sum_probs=114.7
Q ss_pred ccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEcccccc-C--CCCCCCcCcHHHHHHhhcccceEEeCCHHHHHh
Q psy11349 159 DYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGD-N--GRMYVPEEVLPIYANELLSVADVICPNQFEAEL 235 (360)
Q Consensus 159 ~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~-~--g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~ 235 (360)
..+++++|.+...+ ...++++.+++++ +++++||+... . +..+ .+...+.+ .++++++|+++||+.|++.
T Consensus 119 ~~~~v~~~~~~~~~---~~~~~~~~~~~~g--~~v~~D~~~~~~~~~~~~~-~~~~~~~~-~~~l~~~dil~~N~~E~~~ 191 (298)
T 1vk4_A 119 EGEAVHINPLWYGE---FPEDLIPVLRRKV--MFLSADAQGFVRVPENEKL-VYRDWEMK-EKYLKYLDLFKVDSREAET 191 (298)
T ss_dssp CSSEEEECCSSTTS---SCGGGHHHHHHHC--SEEEEETHHHHEEEETTEE-EECCCTTH-HHHGGGCSEEEEEHHHHHH
T ss_pred CCCEEEECCccccc---ccHHHHHHHHHcC--CEEEEecCccccccccccc-cccchHHH-HhhcccCCEEecCHHHHHH
Confidence 47888888763221 1234556666666 79999997310 0 0000 00111112 3678899999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHH
Q psy11349 236 LTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLA 314 (360)
Q Consensus 236 L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a 314 (360)
|+|.+ ++.++++.|.+.|++.|+|| + ++|++++ . ++.++++.+++++. |+||||+|+|+|++
T Consensus 192 l~g~~-----~~~~~~~~l~~~g~~~vvvT---~-~~G~~~~----~----~~~~~~~~~~v~vvDttGAGDaF~a~~~~ 254 (298)
T 1vk4_A 192 LTGTN-----DLRESCRIIRSFGAKIILAT---H-ASGVIVF----D----GNFYEASFRSWSLEGRTGRGDTCTAAFLV 254 (298)
T ss_dssp HHSCS-----CHHHHHHHHHHTTCSSEEEE---E-TTEEEEE----S----SSEEEEECCCSSGGGGTTHHHHHHHHHHH
T ss_pred HhCCC-----CHHHHHHHHHhcCCCEEEEE---c-CCCcEEE----e----CCEEEeccCCcccCCCcCccHHHHHHHHH
Confidence 99963 56778888888999999999 7 8887643 2 34567788877776 99999999999999
Q ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 315 YITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 315 ~L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+|++.|+++++|+++|+++++.++++
T Consensus 255 ~l~~~g~~~~~a~~~A~a~aa~~v~~ 280 (298)
T 1vk4_A 255 GFVFKKMSIEKATKFAAAVTSVKMRH 280 (298)
T ss_dssp HHHTSCCCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHcc
Confidence 99854799999999999998776654
No 58
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.71 E-value=6.7e-17 Score=149.42 Aligned_cols=164 Identities=12% Similarity=0.083 Sum_probs=115.1
Q ss_pred cCEEEEeee-CCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcc--cceEEeCCHHHHHhc
Q psy11349 160 YTHVLTGYC-RSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLS--VADVICPNQFEAELL 236 (360)
Q Consensus 160 ~d~i~~G~l-~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~--~~diitpN~~E~~~L 236 (360)
++++++++. .+++..+.+.++++.+++.+ +|+|+||+..... .......+++++ ++++||||..|++.|
T Consensus 59 a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~--~pvVlDp~g~~~~------~~~~~~~~~ll~~~~~~vitPN~~E~~~L 130 (272)
T 1ekq_A 59 AGALVLNIGTLSKESVEAMIIAGKSANEHG--VPVILDPVGAGAT------PFRTESARDIIREVRLAAIRGNAAEIAHT 130 (272)
T ss_dssp SSEEEEECTTCCHHHHHHHHHHHHHHHHTT--CCEEEECTTBTTB------HHHHHHHHHHHHHSCCSEEEECHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHhcC--CeEEEeCCCcCcc------cchHHHHHHHHccCCCeEECCCHHHHHHH
Confidence 565555433 36677788888988888766 8999999754321 011111135565 899999999999999
Q ss_pred cCCC-C--------CCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchH
Q psy11349 237 TKIP-I--------KDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGD 306 (360)
Q Consensus 237 ~g~~-~--------~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD 306 (360)
+|.+ . .+.+++.+++++|.+++...|++|| ..+ ++. . + ++.++++.+..... ++|+||
T Consensus 131 ~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~G----~~~-~i~--~-~----~~~~~~~~~~~~~~~ttGaGD 198 (272)
T 1ekq_A 131 VGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAITG----EVD-VIA--D-T----SHVYTLHNGHKLLTKVTGAGC 198 (272)
T ss_dssp CC---------------HHHHHHHHHHHHHHTSEEEECS----SSE-EEE--C-S----SCEEEECCCCGGGGGSTTHHH
T ss_pred hCCCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEEC----CCC-EEE--e-C----CEEEEEcCCCccccCccCchH
Confidence 9976 4 3457888899999887666677774 333 222 2 2 45666665444444 899999
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhh
Q psy11349 307 LFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQS 344 (360)
Q Consensus 307 ~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~t~~~ 344 (360)
+|+|++++++++ |.++.+|++.|.++...+.+.+.+.
T Consensus 199 ~lag~iaa~la~-g~~~~~A~~~A~~~~~~A~~~a~~~ 235 (272)
T 1ekq_A 199 LLTSVVGAFCAV-EENPLFAAIAAISSYGVAAQLAAQQ 235 (272)
T ss_dssp HHHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999 9999999999999888888777653
No 59
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=99.71 E-value=1.6e-16 Score=151.09 Aligned_cols=150 Identities=21% Similarity=0.164 Sum_probs=112.4
Q ss_pred ccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccC
Q psy11349 159 DYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTK 238 (360)
Q Consensus 159 ~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g 238 (360)
.+++++++... .+.+.++++.+++.+ +++++||+++.. .| . .+.+ .++++++|+++||+.|++.|+|
T Consensus 148 ~~~~v~~~~~~----~~~~~~~~~~a~~~g--~~v~~D~~~~~~--~~-~---~~~l-~~~l~~~dil~~N~~E~~~l~g 214 (334)
T 2pkf_A 148 KPELVIIGAND----PEAMFLHTEECRKLG--LAFAADPSQQLA--RL-S---GEEI-RRLVNGAAYLFTNDYEWDLLLS 214 (334)
T ss_dssp SCSEEEEESCC----HHHHHHHHHHHHHHT--CCEEEECGGGGG--TS-C---HHHH-HTTTTTCSEEEEEHHHHHHHHH
T ss_pred CCCEEEEcCCC----hHHHHHHHHHHHhcC--CeEEEeccchhh--hh-h---HHHH-HHHHhcCCEEecCHHHHHHHhc
Confidence 57877654321 245667777787777 789999988752 23 1 1333 4788999999999999999988
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCce-EEEEEecccC-Cc-ccCchHHHHHHHHHH
Q psy11349 239 IPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKT-TVSINIPQFD-AS-FTGTGDLFAALMLAY 315 (360)
Q Consensus 239 ~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~-~~~~~~~~v~-~~-t~GaGD~f~a~~~a~ 315 (360)
....+.+ ++.+. ++.|+|| +|++|++++. + ++ .++++.++++ +. |+||||+|+|+|+++
T Consensus 215 ~~~~~~~-------~l~~~-~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~ 276 (334)
T 2pkf_A 215 KTGWSEA-------DVMAQ-IDLRVTT---LGPKGVDLVE---P----DGTTIHVGVVPETSQTDPTGVGDAFRAGFLTG 276 (334)
T ss_dssp HHCCCHH-------HHHTT-CSCEEEE---CGGGCEEEEC---T----TSCEEEECCCCCSCCCCCTTHHHHHHHHHHHH
T ss_pred cCCCCHH-------HHHhc-CCEEEEE---eCCCCeEEEe---C----CCcEEEeCCcCCCCCCCCCCchHHHHHHHHHH
Confidence 5332222 23443 7899999 8888876542 2 44 7788888876 44 999999999999999
Q ss_pred HHcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 316 ITRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 316 L~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
|++ |+++++|+++|+++++.++++
T Consensus 277 l~~-g~~~~~a~~~A~~~aa~~v~~ 300 (334)
T 2pkf_A 277 RSA-GLGLERSAQLGSLVAVLVLES 300 (334)
T ss_dssp HHT-TCCHHHHHHHHHHHHHHHHTS
T ss_pred HHc-CCCHHHHHHHHHHHHHHHHhC
Confidence 999 999999999999998777653
No 60
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=99.70 E-value=2.7e-16 Score=147.94 Aligned_cols=150 Identities=18% Similarity=0.201 Sum_probs=112.5
Q ss_pred cCEEE-Eeee-CCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCC--CcCcHHHHHHhhcccceEEeCCHHHHHh
Q psy11349 160 YTHVL-TGYC-RSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYV--PEEVLPIYANELLSVADVICPNQFEAEL 235 (360)
Q Consensus 160 ~d~i~-~G~l-~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~--~~~~~~~~~~~ll~~~diitpN~~E~~~ 235 (360)
.+++. .|++ ..+...+.+.++++.++ .+ +++++||+.+.. .|. .++..+.+ +++++++|+++||+.|++.
T Consensus 125 ~~~~~~~g~~~~~~~~~~~~~~~~~~a~-~~--~~v~~Dp~~~~~--~~~~~~~~~~~~~-~~~l~~~di~~~N~~E~~~ 198 (313)
T 3ewm_A 125 AKIVNFGSVILARNPSRETVMKVIKKIK-GS--SLIAFDVNLRLD--LWRGQEEEMIKVL-EESIKLADIVKASEEEVLY 198 (313)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHHHHB-TT--BEEEEECCCCGG--GGTTCHHHHHHHH-HHHHHHCSEEEEEHHHHHH
T ss_pred CCEEEEcCcccCCcchHHHHHHHHHHhc-cC--CEEEEeCCCChH--HcCCCHHHHHHHH-HHHHhhCCEEecCHHHHHH
Confidence 66664 4554 34445677788888876 34 899999976542 332 12233333 5788999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHH
Q psy11349 236 LTKIPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLA 314 (360)
Q Consensus 236 L~g~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a 314 (360)
|++.... ..+...|+|| +|++|++++. + ++.++++.++++.. |+||||+|+|+|++
T Consensus 199 l~~~~~~-------------~~~~~~vviT---~G~~G~~~~~---~----~~~~~~~~~~v~vvDttGAGDaf~a~~~~ 255 (313)
T 3ewm_A 199 LENQGVE-------------VKGSMLTAIT---LGPKGCRLIK---N----ETVVDVPSYNVNPLDTTGAGDAFMAALLV 255 (313)
T ss_dssp HHTTTCC-------------CCCSSEEEEE---CGGGEEEEEE---T----TEEEEEECCCCCCSCCTTHHHHHHHHHHH
T ss_pred HhccCcc-------------ccCceEEEEE---ECCCCeEEEE---C----CeeEEcCCCCcccCCCCCchHHHHHHHHH
Confidence 9886431 1245568999 8899987653 3 56788898888877 99999999999999
Q ss_pred HHH--cCCCCHHHHHHHHHHHHHHHHH
Q psy11349 315 YIT--RTNHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 315 ~L~--~~g~~l~~A~~~A~a~~~~~l~ 339 (360)
+|+ + |+++++|+++|++++..+++
T Consensus 256 ~l~~~~-g~~l~~a~~~A~~~aa~~v~ 281 (313)
T 3ewm_A 256 GILKLK-GLDLLKLGKFANLVAALSTQ 281 (313)
T ss_dssp HHHHSS-SCCHHHHHHHHHHHHHHHTT
T ss_pred HHHhcC-CCCHHHHHHHHHHHHHHHHc
Confidence 999 9 99999999999998766654
No 61
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=99.69 E-value=8.2e-16 Score=144.66 Aligned_cols=163 Identities=15% Similarity=0.120 Sum_probs=111.6
Q ss_pred ccCCHHHHHHHHHHhhhCCCCccCEEEEeeeCCHHHHHHHHHHHHHHHhcCC------CceEEEccccccCCCCCCCcCc
Q psy11349 138 KVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANP------TLMYVCDPVMGDNGRMYVPEEV 211 (360)
Q Consensus 138 ~~l~~~~l~~ll~~~~~~~~~~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~------~~~vv~Dpv~~~~g~~~~~~~~ 211 (360)
..+++++++.. .++ .+++++++... + +.+.++++.+++.+. .+++++||... .+.
T Consensus 132 ~~~~~~~~~~~--~l~-----~~~~v~~~~~~-~---~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~--------~~~ 192 (312)
T 2hlz_A 132 PDVSATDFEKV--DLT-----QFKWIHIEGRN-A---SEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP--------REE 192 (312)
T ss_dssp CCCCHHHHHTS--CGG-----GEEEEEEECSS-H---HHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC--------CGG
T ss_pred ccCCHHHhhHh--hhc-----cCCEEEEeccC-H---HHHHHHHHHHHHhcccccCCCCeEEEEEcccc--------hHH
Confidence 45666555421 222 57777654432 2 234455555555421 26899998321 111
Q ss_pred HHHHHHhhcccceEEeCCHHHHHhccCCCCCCHHHHHHHHHHHHhcCC--CEEEEeccccCCCceEEEEEeeeccCCceE
Q psy11349 212 LPIYANELLSVADVICPNQFEAELLTKIPIKDKASLLKTINVLHDRGI--KTVVISSSELGPEKHLLGVASTVVGGSKTT 289 (360)
Q Consensus 212 ~~~~~~~ll~~~diitpN~~E~~~L~g~~~~~~~d~~~aa~~l~~~g~--~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~ 289 (360)
+ .++++++|+++||+.|++.| |. ++..++++.+.+.+. +.|+|| +|++|++++. .+ ++.
T Consensus 193 ---~-~~~l~~~dil~~n~~ea~~l-g~-----~~~~~~~~~l~~~~~~g~~vvvt---~G~~G~~~~~--~~----~~~ 253 (312)
T 2hlz_A 193 ---L-FQLFGYGDVVFVSKDVAKHL-GF-----QSAEEALRGLYGRVRKGAVLVCA---WAEEGADALG--PD----GKL 253 (312)
T ss_dssp ---G-GGGGGSSSEEEECHHHHHHT-TC-----CSHHHHHHHHGGGSCTTCEEEEE---CGGGCEEEEC--TT----CCE
T ss_pred ---H-HHHHhcCCEEEEcHHHHHHc-CC-----CCHHHHHHHHHHhcCCCCEEEEE---ecccCeEEEc--cC----CCE
Confidence 2 36789999999999999988 64 234556667766543 799999 8888976542 12 346
Q ss_pred EEEEec-ccCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q psy11349 290 VSINIP-QFDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 290 ~~~~~~-~v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~ 339 (360)
++++.+ .++.. |+||||+|+|+|+++|++ |+++++|+++|++++..+++
T Consensus 254 ~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~-g~~~~~a~~~a~~~aa~~v~ 304 (312)
T 2hlz_A 254 LHSDAFPPPRVVDTLGAGDTFNASVIFSLSQ-GRSVQEALRFGCQVAGKKCG 304 (312)
T ss_dssp EEECCCCCSSCCCCTTHHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHT
T ss_pred EECCCCCCCCcccCCCchHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHh
Confidence 677773 45666 999999999999999999 99999999999999877664
No 62
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=99.67 E-value=1.6e-16 Score=148.73 Aligned_cols=149 Identities=15% Similarity=0.142 Sum_probs=111.9
Q ss_pred ccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccC
Q psy11349 159 DYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTK 238 (360)
Q Consensus 159 ~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g 238 (360)
.+++++++.. .+ +.+.++++.+++. . ++++||+.+.. .| . .+.+ .++++++|+++||+.|++.|+|
T Consensus 130 ~~~~v~~~~~-~~---~~~~~~~~~a~~~--g-~v~~D~~~~~~--~~-~---~~~~-~~~l~~~dil~~N~~E~~~l~g 195 (302)
T 2c4e_A 130 NTEIVHIATG-DP---EFNLKCAKKAYGN--N-LVSFDPGQDLP--QY-S---KEML-LEIIEHTNFLFMNKHEFERASN 195 (302)
T ss_dssp CEEEEEECSS-CH---HHHHHHHHHHBTT--B-EEEECCGGGGG--GC-C---HHHH-HHHHHTCSEEEEEHHHHHHHHH
T ss_pred cCCEEEEeCC-Cc---HHHHHHHHHHHhc--C-CEEEeCchhhh--hh-h---HHHH-HHHHhcCCEEEcCHHHHHHHhC
Confidence 4777776542 22 5667777777664 3 89999985421 12 1 2334 4678999999999999999988
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccC-Cc-ccCchHHHHHHHHHHH
Q psy11349 239 IPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFD-AS-FTGTGDLFAALMLAYI 316 (360)
Q Consensus 239 ~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~-~~-t~GaGD~f~a~~~a~L 316 (360)
.+..+. . +|.++ ++.|+|| +|++|++++. + ++.++++.++++ .. |+||||+|+|+|+++|
T Consensus 196 ~~~~~~-----~--~l~~~-~~~vvvt---~G~~G~~~~~---~----~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l 257 (302)
T 2c4e_A 196 LLNFEI-----D--DYLER-VDALIVT---KGSKGSVIYT---K----DKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAY 257 (302)
T ss_dssp HHTCCH-----H--HHHTT-CSEEEEE---CGGGCEEEEC---S----SCEEEECCCCCSCCSCCTTHHHHHHHHHHHHH
T ss_pred CCCccH-----H--HHHhc-CCEEEEE---ECCCceEEEe---C----CcEEEeCCccCCcCCcCCCchHHHHHHHHHHH
Confidence 532221 1 56667 8999999 8888886542 3 567788888887 66 9999999999999999
Q ss_pred HcCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 317 TRTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 317 ~~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
++ |+++++|+++|+++++.++++
T Consensus 258 ~~-g~~~~~a~~~a~~~aa~~~~~ 280 (302)
T 2c4e_A 258 VK-GYDLEKCGLIGAATASFVVEA 280 (302)
T ss_dssp HT-TCCHHHHHHHHHHHHHHHTTS
T ss_pred Hc-CCCHHHHHHHHHHHHHHHHcc
Confidence 99 999999999999988766653
No 63
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=99.66 E-value=6.2e-16 Score=146.46 Aligned_cols=149 Identities=17% Similarity=0.194 Sum_probs=111.8
Q ss_pred ccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccC
Q psy11349 159 DYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTK 238 (360)
Q Consensus 159 ~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g 238 (360)
.+++++++.. . .+.+.++++.+++.+ +++++||+++.. .| .. +.+ .++++++|+++||+.|++.|+|
T Consensus 135 ~~~~v~~~~~-~---~~~~~~~~~~a~~~g--~~v~~D~~~~~~--~~-~~---~~~-~~~l~~~dil~~N~~Ea~~l~g 201 (326)
T 3b1n_A 135 DIKLAIVGPD-G---FQGMVQHTEELAQAG--VPFIFDPGQGLP--LF-DG---ATL-RRSIELATYIAVNDYEAKLVCD 201 (326)
T ss_dssp SCSEEEECSC-C---HHHHHHHHHHHHHHT--CCEEECCGGGGG--GC-CH---HHH-HHHHHHCSEEEEEHHHHHHHHH
T ss_pred CCCEEEECCc-c---HHHHHHHHHHHHHCC--CEEEEeCchhhh--hc-cH---HHH-HHHHHhCCEEecCHHHHHHHhC
Confidence 5787775432 1 245667778888777 789999987642 22 21 333 4678899999999999999987
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccC-Cc-ccCchHHHHHHHHHHH
Q psy11349 239 IPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFD-AS-FTGTGDLFAALMLAYI 316 (360)
Q Consensus 239 ~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~-~~-t~GaGD~f~a~~~a~L 316 (360)
....+.+ ++.+ +++.|+|| +|++|++++. + ++.++++.++++ +. |+||||+|+|+|+++|
T Consensus 202 ~~~~~~~-------~l~~-~~~~vvvT---~G~~Ga~~~~---~----~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l 263 (326)
T 3b1n_A 202 KTGWSED-------EIAS-RVQALIIT---RGEHGATIRH---R----DGTEQIPAVRAERVIDPTGCGDAFRGGLLYGI 263 (326)
T ss_dssp HHCCCHH-------HHHT-TSSEEEEE---CGGGCEEEEE---T----TEEEEECCCCCSCCCCCTTHHHHHHHHHHHHH
T ss_pred CCCCCHH-------HHHh-cCCEEEEe---cCCCceEEEE---C----CcEEEeCCCCCCCCCCCCCchHHHHHHHHHHH
Confidence 5332222 2333 37899999 8889987643 3 567778888876 44 9999999999999999
Q ss_pred HcCCCCHHHHHHHHHHHHHHHHH
Q psy11349 317 TRTNHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 317 ~~~g~~l~~A~~~A~a~~~~~l~ 339 (360)
++ |+++++|+++|+++++.+++
T Consensus 264 ~~-g~~~~~a~~~A~~~aa~~v~ 285 (326)
T 3b1n_A 264 EH-GFDWATAGRLASLMGALKIA 285 (326)
T ss_dssp HT-TCCHHHHHHHHHHHHHHHHT
T ss_pred Hc-CCCHHHHHHHHHHHHHHHHc
Confidence 99 99999999999998876664
No 64
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.65 E-value=3.3e-15 Score=137.35 Aligned_cols=168 Identities=14% Similarity=0.096 Sum_probs=119.1
Q ss_pred ccCEEEEeeeC-CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhcc
Q psy11349 159 DYTHVLTGYCR-SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLT 237 (360)
Q Consensus 159 ~~d~i~~G~l~-~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~ 237 (360)
.++++++|... +++..+.+...++.+++.+ .|+|+||+..... .+ ..+..+.+. . ..+++||||..|++.|+
T Consensus 58 ~a~alvIn~G~l~~~~~~~~~~a~~~a~~~~--~PvVlDPVg~gas-~~-r~~~~~~Ll-~--~~~~VItpN~~E~~~L~ 130 (273)
T 3dzv_A 58 QTSALVLNLGHLSQEREQSLLAASDYARQVN--KLTVVDLVGYGAS-DI-RNEVGEKLV-H--NQPTVVKGNLSEMRTFC 130 (273)
T ss_dssp TCSEEEEECCSCCHHHHHHHHHHHHHHHHTT--CCEEEECTTTTSC-HH-HHHHHHHHH-H--TCCSEEEEEHHHHHHHT
T ss_pred HCCeEEEecCCCChHHHHHHHHHHHHHHHcC--CcEEEchhhcCCc-cc-CHHHHHHHH-h--cCCcEECCCHHHHHHHh
Confidence 36767665552 5666788888888888866 8999999876421 01 122233332 1 37899999999999999
Q ss_pred CCCCC-----C------HH---HHHHHHHHHHhcCC-CEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-c
Q psy11349 238 KIPIK-----D------KA---SLLKTINVLHDRGI-KTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-F 301 (360)
Q Consensus 238 g~~~~-----~------~~---d~~~aa~~l~~~g~-~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t 301 (360)
|.... + .+ +..+++++|.+++. ..|++||. .+++.. + ++.+.++....... +
T Consensus 131 g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~-------~D~i~d-g----~~~~~~~~G~~~~~~v 198 (273)
T 3dzv_A 131 QLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGI-------QDVLVS-Q----EQVIVLQNGVPELDCF 198 (273)
T ss_dssp TCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESS-------SEEEEC-S----SCEEEECCCCGGGGSS
T ss_pred CCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECC-------eeEEEc-C----CEEEEeCCCCcccCCc
Confidence 97642 1 13 67788999998776 89999964 233322 2 44555443222222 6
Q ss_pred cCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhhCC
Q psy11349 302 TGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFP 346 (360)
Q Consensus 302 ~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~t~~~~~ 346 (360)
+|+||+|+|+++++|++ |.++.+|+..|..+...+.+.+.+...
T Consensus 199 ~GtGc~Ls~~Iaa~lA~-g~~~~~Aa~~A~~~~~~Age~A~~~~~ 242 (273)
T 3dzv_A 199 TGTGDLVGALVAALLGE-GNAPMTAAVAAVSYFNLCGEKAKTKSQ 242 (273)
T ss_dssp TTHHHHHHHHHHHHHHH-TCCHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred CCchHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 89999999999999999 999999999999999888888776543
No 65
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.64 E-value=4.7e-16 Score=143.08 Aligned_cols=164 Identities=18% Similarity=0.083 Sum_probs=115.6
Q ss_pred ccCEEEEeeeC-CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcc-cceEEeCCHHHHHhc
Q psy11349 159 DYTHVLTGYCR-SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLS-VADVICPNQFEAELL 236 (360)
Q Consensus 159 ~~d~i~~G~l~-~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~-~~diitpN~~E~~~L 236 (360)
.+|++++|+.. +++..+.+..+++.+++.+ +|+|+||+..... .+ ..+.. ..++. .+++||||..|++.|
T Consensus 56 ~~dalvi~~G~~~~~~~~~~~~~~~~a~~~~--~pvVlDpv~~~~~-~~-~~~~~----~~ll~~~~~vITPN~~E~~~L 127 (265)
T 1v8a_A 56 LADAVVINIGTLDSGWRRSMVKATEIANELG--KPIVLDPVGAGAT-KF-RTRVS----LEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HCSEEEEECTTCCHHHHHHHHHHHHHHHHHT--CCEEEECTTBTTB-HH-HHHHH----HHHHHHCCSEEEEEHHHHHHH
T ss_pred HCCEEEEEECCCCHHHHHHHHHHHHHHHHcC--CcEEEcCcccccc-cc-CHHHH----HHHHHhCCcEEcCCHHHHHHH
Confidence 36777776553 6666777777888787766 8999999865320 00 01111 13332 389999999999999
Q ss_pred cCCCC-----C----CHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCC-cccCchH
Q psy11349 237 TKIPI-----K----DKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDA-SFTGTGD 306 (360)
Q Consensus 237 ~g~~~-----~----~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~-~t~GaGD 306 (360)
+|.+. . +.++..+++++|.+++...|++||. .+ + +.. + ++.+.++...... .++|+||
T Consensus 128 ~g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~VvlkG~----~d-~--i~~-~----~~~~~~~~g~~~~~~~~GtGD 195 (265)
T 1v8a_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGA----VD-Y--VSD-G----RRTFAVYNGHELLGRVTGTGC 195 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHHHHTTSEEEEESS----SE-E--EEC-S----SCEEEECCCCGGGGGSTTHHH
T ss_pred hCCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEcCC----Cc-E--EEc-C----CEEEEEcCCCcCcCCccChhH
Confidence 98652 1 2267888999999887788999953 22 2 212 2 4555555433333 3889999
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhh
Q psy11349 307 LFAALMLAYITRTNHNVKESLERTIATIQSVLERTAQS 344 (360)
Q Consensus 307 ~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~t~~~ 344 (360)
+|+|+++++|++ |.+ .+|+..|..+...+.+.+.+.
T Consensus 196 ~Lsg~iaa~lA~-g~~-~~Aa~~a~~~~~~Ag~~a~~~ 231 (265)
T 1v8a_A 196 MVAALTGAFVAV-TEP-LKATTSALVTFGIAAEKAYEE 231 (265)
T ss_dssp HHHHHHHHHHTT-SCH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999 999 899888998888888877664
No 66
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=99.61 E-value=1.5e-15 Score=142.92 Aligned_cols=138 Identities=18% Similarity=0.189 Sum_probs=108.1
Q ss_pred ccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccC
Q psy11349 159 DYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTK 238 (360)
Q Consensus 159 ~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g 238 (360)
++++++++...+ .+.+.++++.+++.+ +++++||+... ...+.+ ..+++++|+++||+.|++.|+|
T Consensus 143 ~~~~v~~~~~~~---~~~~~~~~~~a~~~g--~~v~~D~~~~~--------~~~~~~-~~ll~~~dil~~N~~Ea~~l~g 208 (310)
T 3go6_A 143 NCDVLLTQLEIP---VATALAAARAAQSAD--AVVMVNASPAG--------QDRSSL-QDLAAIADVVIANEHEANDWPS 208 (310)
T ss_dssp TCSEEEECSSSC---HHHHHHHHHHHHHTT--CEEEEECCSSS--------CCHHHH-HHHHHHCSEEEEEHHHHHHSSS
T ss_pred cCCEEEECCCCC---HHHHHHHHHHHHHcC--CEEEEcCCccc--------cchHHH-HHHHhhCCEEEeCHHHHHHHhC
Confidence 678887653323 345667777788776 89999997432 123444 4778999999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHHHHH
Q psy11349 239 IPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLAYIT 317 (360)
Q Consensus 239 ~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a~L~ 317 (360)
. ++.|+|| +|++|++++. + ++.++++.++++.+ |+||||+|+|+|+++|+
T Consensus 209 ~-------------------~~~vvvt---~G~~Ga~~~~---~----~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~ 259 (310)
T 3go6_A 209 P-------------------PTHFVIT---LGVRGARYVG---A----DGVFEVPAPTVTPVDTAGAGDVFAGVLAANWP 259 (310)
T ss_dssp C-------------------CSEEEEE---CGGGCEEEEE---T----TEEEEECCCCCCCSCCTTHHHHHHHHHHHHCC
T ss_pred C-------------------CCEEEEE---ECCCCEEEEE---C----CceEEeCCCCCCcCcCCCchHHHHHHHHHHHH
Confidence 4 6889999 8889987543 3 67788888888877 99999999999999998
Q ss_pred cC---CCCHHHHHHHHHHHHHHHHH
Q psy11349 318 RT---NHNVKESLERTIATIQSVLE 339 (360)
Q Consensus 318 ~~---g~~l~~A~~~A~a~~~~~l~ 339 (360)
+. |+++++|+++|+++++.+++
T Consensus 260 ~~~~~g~~l~~a~~~A~~~aa~~v~ 284 (310)
T 3go6_A 260 RNPGSPAERLRALRRACAAGALATL 284 (310)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hcccCCCCHHHHHHHHHHHHHHHhC
Confidence 63 57899999999998766654
No 67
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=99.53 E-value=1.4e-14 Score=135.87 Aligned_cols=139 Identities=12% Similarity=0.113 Sum_probs=102.8
Q ss_pred ccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccC
Q psy11349 159 DYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTK 238 (360)
Q Consensus 159 ~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g 238 (360)
.+++++++... .+.++++.++ + ++++||+... +. ...+.+ ..+++++|+++||+.|++.|+|
T Consensus 140 ~~~~v~~~~~~------~~~~~~~~a~----~-~v~~D~~~~~----~~--~~~~~~-~~~l~~~dil~~N~~E~~~l~g 201 (306)
T 3bf5_A 140 EYEYVHFSTGP------NYLDMAKSIR----S-KIIFDPSQEI----HK--YSKDEL-KKFHEISYMSIFNDHEYRVFRE 201 (306)
T ss_dssp CEEEEEECSSS------SHHHHHHHCC----S-EEEECCGGGG----GG--SCHHHH-HHHHHHCSEEEEEHHHHHHHHH
T ss_pred CCCEEEECChH------HHHHHHHHhC----C-cEEEcCchhh----hh--ccHHHH-HHHHhcCCEEEcCHHHHHHHhC
Confidence 57888766433 3445555543 2 7999997432 11 113333 4678899999999999999987
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHHHHH
Q psy11349 239 IPIKDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLAYIT 317 (360)
Q Consensus 239 ~~~~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a~L~ 317 (360)
....+.. ++ .|+|| +|++|++++. + ++.++++.++++ . |+||||+|+|+|+++|+
T Consensus 202 ~~~~~~~-------~l------~vvvT---~G~~Ga~~~~---~----~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~ 257 (306)
T 3bf5_A 202 MTGLSSP-------KV------TTIVT---NGERGSSLFM---D----GKKYDFPAIPSS-GDTVGAGDSFRAGLYLALY 257 (306)
T ss_dssp HHCCSSC-------SS------CEEEE---EGGGEEEEEE---T----TEEEEEECCCCC-SCCTTHHHHHHHHHHHHHH
T ss_pred CCCcCcc-------cE------EEEEe---ecccCeEEEe---C----CcEEEecCCcCC-CCCCCccHHHHHHHHHHHH
Confidence 5321110 11 18999 8888987543 3 567788988888 7 99999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q psy11349 318 RTNHNVKESLERTIATIQSVLER 340 (360)
Q Consensus 318 ~~g~~l~~A~~~A~a~~~~~l~~ 340 (360)
+ |+++++|+++|+++++.++++
T Consensus 258 ~-g~~~~~a~~~A~~~aa~~v~~ 279 (306)
T 3bf5_A 258 N-RRSIEKGMIYGTIIAHHVIDD 279 (306)
T ss_dssp T-TCCHHHHHHHHHHHHHHHHHH
T ss_pred c-CCCHHHHHHHHHHHHHHHhcc
Confidence 9 999999999999998888775
No 68
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=99.53 E-value=4.6e-15 Score=146.45 Aligned_cols=233 Identities=13% Similarity=0.120 Sum_probs=149.5
Q ss_pred EEEEEEceec------ceeeechHHHHHHHHHHHhhc-ccccccccccceeeecccccc-cccccCCchhhhhcCeeeee
Q psy11349 49 TVSINIPQFD------ASFTGTGDLFAALMLAYITRT-NHNVKESLERTIATIQSVLER-TAQSFPNKGQYEVLGFEVDA 120 (360)
Q Consensus 49 ~~~~~~p~~~------~~f~G~gd~~~~~l~~~~~~~-~~~~~~~~~~~vl~I~~~~~~-~~~~~~~~~~l~~~G~~~~~ 120 (360)
..+|+||... .++....|+. +..+ ..+.||+..++|++|+|+ + +++.++++++| +.|...+.
T Consensus 197 v~dIGip~~~~~~~~~~~~~~~~~~~-------lp~r~~~~~hKg~~G~vlvigGs--~~GA~~laa~aAl-r~GaGlv~ 266 (475)
T 3k5w_A 197 VGHLGVFNPIYEIPTDTFLLEKSDLK-------LPLRDKKNAHKGDYGHAHVLLGK--HSGAGLLSALSAL-SFGSGVVS 266 (475)
T ss_dssp EECCSSCHHHHCCCCSEEECCGGGCC-------CCCCCCSSCCGGGGCEEEEEECS--SHHHHHHHHHHHH-HTTCSEEE
T ss_pred EeCCCCChHHhccCccceecCHHHhc-------ccCCCCCCCCCCCCCeEEEEeCC--CCcHHHHHHHHHH-HhCCCeEE
Confidence 3567777421 3456667741 2444 578999999999999998 6 99999989999 56998887
Q ss_pred eeeeeecCCCCCCccccccCCHHHHHHHHHHhhhCCCCccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccc
Q psy11349 121 INTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMG 200 (360)
Q Consensus 121 i~t~~~s~~~~~~~~~g~~l~~~~l~~ll~~~~~~~~~~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~ 200 (360)
+.+... .... ..+..+.+... .+. .++|++.+|+.......+ +.++++ . + |+|+|.-
T Consensus 267 ~~~~~~-~~~~-~~~~pe~m~~~-------~~~----~~~~a~~iGPGlG~~~~~-l~~~l~----~--~-p~VlDAD-- 323 (475)
T 3k5w_A 267 VQALEC-EITS-NNKPLELVFCE-------NFP----NLLSAFALGMGLENIPKD-FNRWLE----L--A-PCVLDAG-- 323 (475)
T ss_dssp EEESSS-CCSS-SSSCTTSEEES-------SCC----SSCSEEEECTTCSSCCTT-HHHHHH----H--S-CEEEEGG--
T ss_pred EeccHH-Hhhc-ccCChhheeeh-------hhc----cCCCEEEEcCCCCCCHHH-HHHHHh----c--C-CEEEECc--
Confidence 766521 0000 01111111000 011 268999999884221113 444442 1 2 7999972
Q ss_pred cCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccCC-----CCCC-HHHHHHHHHHHHhcC-CCEEEEeccccCCCc
Q psy11349 201 DNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTKI-----PIKD-KASLLKTINVLHDRG-IKTVVISSSELGPEK 273 (360)
Q Consensus 201 ~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g~-----~~~~-~~d~~~aa~~l~~~g-~~~Vlvtg~~~g~~g 273 (360)
.++. .+.. ..++...+||||..|+++|+|. +..+ .++..++++++.++. ...|++||.+
T Consensus 324 ---aL~~-~~~~-----~~~~~~~VlTPh~~E~~rL~g~~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~----- 389 (475)
T 3k5w_A 324 ---VFYH-KEIL-----QALEKEAVLTPHPKEFLSLLNLVGINISMLELLDNKLEIARDFSQKYPKVVLLLKGAN----- 389 (475)
T ss_dssp ---GGGS-GGGG-----TTTTSSEEEECCHHHHHHHHHHTSCCCCTTSGGGSCC--CHHHHHHCTTEEEEECSSS-----
T ss_pred ---ccCC-chhh-----hccCCCEEECCCHHHHHHHhCCccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCCC-----
Confidence 1211 1111 2345679999999999999986 4433 246677888998876 7789999654
Q ss_pred eEEEEEeeeccCCceEEEEEecccCCc-ccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Q psy11349 274 HLLGVASTVVGGSKTTVSINIPQFDAS-FTGTGDLFAALMLAYITRTNHNVKESLERTIATIQSVL 338 (360)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~v~~~-t~GaGD~f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l 338 (360)
.++. + ++..++.....+.+ ++|+||+|+|.++++|++ |.++.+|+..| .|+++..
T Consensus 390 --~vI~--~----~~~~~~~~~g~~~mat~GtGdvLsg~Iaa~lA~-g~~~~~Aa~~a-~~lhg~a 445 (475)
T 3k5w_A 390 --TLIA--H----QGQVFINILGSVALAKAGSGDVLAGLILSLLSQ-NYTPLDAAINA-SLAHALA 445 (475)
T ss_dssp --EEEE--E----TTEEEEECCCCGGGCSTTHHHHHHHHHHHHHHT-TCCHHHHHHHH-HHHHHHG
T ss_pred --CEEE--C----CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHc-CCCHHHHHHHH-HHHHHHH
Confidence 1221 2 33445666666677 889999999999999999 99999998765 5555554
No 69
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=99.45 E-value=8.7e-13 Score=120.34 Aligned_cols=167 Identities=16% Similarity=0.023 Sum_probs=113.2
Q ss_pred cCEEEEeee-CCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcccceEEeCCHHHHHhccC
Q psy11349 160 YTHVLTGYC-RSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLSVADVICPNQFEAELLTK 238 (360)
Q Consensus 160 ~d~i~~G~l-~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~~~diitpN~~E~~~L~g 238 (360)
+++++++.. .+++..+.+....+.+++.+ .|+|+|||..... .| ..+..++.+-.++++|+||..|+..|.|
T Consensus 57 a~al~iNiGtl~~~~~~~m~~A~~~A~~~~--~PvVLDPVg~gas-~~----R~~~~~~ll~~~~~vIrgN~sEi~~L~g 129 (265)
T 3hpd_A 57 ADAVVINIGTLDSGWRRSMVKATEIANELG--KPIVLDPVGAGAT-KF----RTRVSLEILSRGVDVLKGNFGEISALLG 129 (265)
T ss_dssp CSEEEEECTTCCHHHHHHHHHHHHHHHHHT--CCEEEECTTBTTB-HH----HHHHHHHHHHHCCSEEEEEHHHHHHHHH
T ss_pred CCeEEEECCCCChHHHHHHHHHHHHHHHcC--CCEEEcCCCCCCc-HH----HHHHHHHHHhcCCcEEcCCHHHHHHHhc
Confidence 566766555 36777888888889888887 8999999865320 11 1111222222478999999999999987
Q ss_pred CCC---------CCHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeeccCCceEEEEEecccCCc-c-cCchHH
Q psy11349 239 IPI---------KDKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVVGGSKTTVSINIPQFDAS-F-TGTGDL 307 (360)
Q Consensus 239 ~~~---------~~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~-t-~GaGD~ 307 (360)
... .+.++..++++++.++....|++||. .++. . + ++..+......+.+ + +|+||+
T Consensus 130 ~~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlkG~-------~d~I-~-d----g~~~~~~~~G~~~m~~vtGtGc~ 196 (265)
T 3hpd_A 130 EEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGA-------VDYV-S-D----GRRTFAVYNGHELLGRVTGTGCM 196 (265)
T ss_dssp HHC----------CHHHHHHHHHHHHHHTTSEEEEESS-------SEEE-E-C----SSCEEEECCCCGGGGGSTTHHHH
T ss_pred ccCCCCCccCccccHHHHHHHHHHHHHHhCCEEEEeCC-------CeEE-E-c----CCEEEEECCCChHhhcCCccchH
Confidence 432 13468889999999888789999954 2333 2 2 33333444455556 4 799999
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhhCCCC
Q psy11349 308 FAALMLAYITRTNHNVKESLERTIATIQSVLERTAQSFPNK 348 (360)
Q Consensus 308 f~a~~~a~L~~~g~~l~~A~~~A~a~~~~~l~~t~~~~~~~ 348 (360)
++|.+++++++ +.++ +|...|..+...+-+.+.+...+.
T Consensus 197 Lsg~iaa~lA~-~~~~-~Aa~~a~~~~g~Age~Aa~~~~Gp 235 (265)
T 3hpd_A 197 VAALTGAFVAV-TEPL-KATTSALVTFGIAAEKAYEEAKYP 235 (265)
T ss_dssp HHHHHHHHHTT-SCHH-HHHHHHHHHHHHHHHHHHHHCCSH
T ss_pred HHHHHHHHHhc-CChH-HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999 8554 566666666656666666544443
No 70
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.42 E-value=2.7e-12 Score=128.75 Aligned_cols=170 Identities=12% Similarity=0.103 Sum_probs=113.5
Q ss_pred cCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhcc--cceEEeCCHHHHHhcc
Q psy11349 160 YTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELLS--VADVICPNQFEAELLT 237 (360)
Q Consensus 160 ~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll~--~~diitpN~~E~~~L~ 237 (360)
++++++|+..-.. .+.+..+++.+++.+ .|+|+|||..... .......+++++ .+++||||..|++.|+
T Consensus 307 ~~alvin~G~l~~-~~~~~~a~~~a~~~~--~PvVlDPVg~~a~------~~r~~~~~~Ll~~~~~~vItpN~~E~~~L~ 377 (540)
T 3nl6_A 307 HATLLLNTGSVAP-PEMLKAAIRAYNDVK--RPIVFDPVGYSAT------ETRLLLNNKLLTFGQFSCIKGNSSEILGLA 377 (540)
T ss_dssp TCEEEEESSCSCC-HHHHHHHHHHHHTTT--CCEEEECTTCTTS------HHHHHHHHHHTTSCCCSEEEECHHHHHHHT
T ss_pred CCeEEEeCCCCCH-HHHHHHHHHHHHHcC--CCEEEChHHhhcc------cccHHHHHHHHhhCCCeEECCCHHHHHHHh
Confidence 6777765553222 677777778787766 7999999875420 111112235665 7899999999999999
Q ss_pred CCCC------C-----CHHHHHHHHHHHHhcCCCEEEEeccccCCCceEEEEEeeec-------------c-CCceEEEE
Q psy11349 238 KIPI------K-----DKASLLKTINVLHDRGIKTVVISSSELGPEKHLLGVASTVV-------------G-GSKTTVSI 292 (360)
Q Consensus 238 g~~~------~-----~~~d~~~aa~~l~~~g~~~Vlvtg~~~g~~g~~~~~~~~~~-------------~-~~~~~~~~ 292 (360)
|.+. + +.++..++++++.+++...|++||. .+++..... + ..+..+.+
T Consensus 378 g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlkG~-------~D~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (540)
T 3nl6_A 378 ELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGE-------FDFIADGTIEGKYSLSKGTNGTSVEDIPCVAV 450 (540)
T ss_dssp TC--------------CCHHHHHHHHHHHHHTTSEEEECSS-------SEEEEECCGGGBCCSSSCCSSCCTTSSCEEEE
T ss_pred CCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEEcCC-------CeEEECCCccccccccccccccccCCccEEEE
Confidence 9653 1 1267888999999887789999963 222221100 0 00234444
Q ss_pred EecccCCc--ccCchHHHHHHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHHhhCC
Q psy11349 293 NIPQFDAS--FTGTGDLFAALMLAYITRTNH---NVKESLERTIATIQSVLERTAQSFP 346 (360)
Q Consensus 293 ~~~~v~~~--t~GaGD~f~a~~~a~L~~~g~---~l~~A~~~A~a~~~~~l~~t~~~~~ 346 (360)
+...++.+ ++|+||+++|.+++++++ +. ++.+|+..|..+...+-+.+.+...
T Consensus 451 ~~G~~~~m~~vtGtGc~Lsg~Iaa~la~-~~~~~~~~~Aa~~a~~~~~~Ag~~A~~~~~ 508 (540)
T 3nl6_A 451 EAGPIEIMGDITASGCSLGSTIACMIGG-QPSEGNLFHAVVAGVMLYKAAGKIASEKCN 508 (540)
T ss_dssp ECSCCGGGGSSTTHHHHHHHHHHHHHHT-CCTTCBHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred CCCChhhccCccCchHHHHHHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44332555 589999999999999999 87 6888888888877777776665443
No 71
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=95.49 E-value=0.13 Score=50.10 Aligned_cols=110 Identities=10% Similarity=0.147 Sum_probs=69.7
Q ss_pred HHHHHHHHHhhhCCCCccCEE-EEeeeC--C--------HHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCc
Q psy11349 143 QDFDELIEGLKMNDLMDYTHV-LTGYCR--S--------PQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEV 211 (360)
Q Consensus 143 ~~l~~ll~~~~~~~~~~~d~i-~~G~l~--~--------~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~ 211 (360)
+++...++.+.. .+|.+ ++|+=. . +...+.+.+.++.++. +++++-+.-. .+.++++
T Consensus 224 e~f~~~l~e~~~----~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e~i~~l~~--~~~~iH~E~A------s~~~~~l 291 (474)
T 3drw_A 224 EDIKPFLGEIGK----EVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKE--KDVKIHVEFA------SVQDRKL 291 (474)
T ss_dssp TTTGGGHHHHHH----HCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHH--TTCEEEEECC------CCSCHHH
T ss_pred HHHHHHHHHhhc----CCCEEEEeccccccccccccccHHHHHHHHHHHHHHhcC--CCCeEEEEeC------ccccHHH
Confidence 445555555531 37754 556432 2 2344555566666653 5588887642 3455677
Q ss_pred HHHHHHhhcccceEEeCCHHHHHhccCC-----------CCCCHHHHHHHHHHHHh-cCCCEEEE
Q psy11349 212 LPIYANELLSVADVICPNQFEAELLTKI-----------PIKDKASLLKTINVLHD-RGIKTVVI 264 (360)
Q Consensus 212 ~~~~~~~ll~~~diitpN~~E~~~L~g~-----------~~~~~~d~~~aa~~l~~-~g~~~Vlv 264 (360)
.+.+.+.++|.+|.+=.|+.|+..+.+. +..+.++..++++.|.+ .+.+.|.|
T Consensus 292 ~~~i~~~i~p~vDSlGmNEqELa~l~~~lg~~~~s~~~~~~~~i~~v~e~~~~ll~~~~l~rIhv 356 (474)
T 3drw_A 292 RKKIITNILPFVDSVGIDEAEIAQILSVLGYRELADRIFTYNRLEDSILGGMIILDELNFEILQV 356 (474)
T ss_dssp HHHHHHHTGGGSSEEEEEHHHHHHHHHHHTCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHhcccccccccCHHHHHHHHHHhcCCccchhhhcCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 7777788999999999999999988753 11235677788887766 35555444
No 72
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=94.79 E-value=0.045 Score=50.42 Aligned_cols=63 Identities=27% Similarity=0.346 Sum_probs=42.1
Q ss_pred eceEEEEEEeeeecCCCCceEEEEecceeccCCCeeEEEEEEceecceeeechHHHHHHHHHHH
Q psy11349 13 IRTTLVVIATQILQRDPSALTCKEKELKLIQSGSKTTVSINIPQFDASFTGTGDLFAALMLAYI 76 (360)
Q Consensus 13 ~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~f~G~gd~~~~~l~~~~ 76 (360)
..+++|+||+....++++.+.+..+.... ..+....+.+..|+++..|+|+||.|+|.+++++
T Consensus 177 ~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~v~~~~~GtGD~fsaal~a~l 239 (300)
T 3zs7_A 177 CGVAHVIIKSFREQENPTHLRFLYSVKEG-SEAAVRRFSGVVPYHEGRYTGTGDVFAACLLAFS 239 (300)
T ss_dssp HTCSEEEEEEEC---CCSEEEEEEEECCS-TTSCCEEEEEEEECCSSCBTTHHHHHHHHHHHHH
T ss_pred hCCCEEEEecCcCCCCCceEEEEEecccc-ccCCCeEEEEEeccCCCCCcCHHHHHHHHHHHHH
Confidence 36789999998876555544444332100 0011256788899999999999999999999998
No 73
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=85.37 E-value=0.99 Score=41.01 Aligned_cols=61 Identities=16% Similarity=0.341 Sum_probs=39.3
Q ss_pred eceEEEEEEeeeecCCCCceEEEEecceeccCCCeeEEEEEEceecceeeechHHHHHHHHHHHhh
Q psy11349 13 IRTTLVVIATQILQRDPSALTCKEKELKLIQSGSKTTVSINIPQFDASFTGTGDLFAALMLAYITR 78 (360)
Q Consensus 13 ~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~f~G~gd~~~~~l~~~~~~ 78 (360)
.....|+||+..+.++++..-+.... .+..+.+.+..|+++..++|+||.|+|.+++.+.+
T Consensus 177 ~g~~~Vvvtgg~~~~~~g~~g~~~~~-----~~~~~~~~~~~~~~~~dt~GaGD~f~aai~a~l~~ 237 (291)
T 3mbh_A 177 KGPQVVIITSVPVHDEPHKTSVYAYN-----RQGNRYWKVTCPYLPAHYPGTGDTFTSVITGSLMQ 237 (291)
T ss_dssp TSCSEEEEEEEEETTEEEEEEEEEEE-----TTTTEEEEEEESCCGGGSTTHHHHHHHHHHHHHHT
T ss_pred hCCCEEEEEeccccCCCCcEEEEEEe-----CCCCeEEEEEecccCCCCCChHHHHHHHHHHHHHc
Confidence 35678999977653222222222221 11123456777888889999999999999888764
No 74
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=73.50 E-value=3.8 Score=36.93 Aligned_cols=58 Identities=17% Similarity=0.210 Sum_probs=37.5
Q ss_pred ceEEEEEEeeeecC-CCCceEEEEecceeccCCCeeEEEEEEceecc---eeeechHHHHHHHHHHHhh
Q psy11349 14 RTTLVVIATQILQR-DPSALTCKEKELKLIQSGSKTTVSINIPQFDA---SFTGTGDLFAALMLAYITR 78 (360)
Q Consensus 14 ~~~~v~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~f~G~gd~~~~~l~~~~~~ 78 (360)
...+|++|+..... +++.+...... + ...+.+..|+++. .++|.||.|+|.+++.+.+
T Consensus 177 g~~~Vvvt~~~~~G~~~~~~~~~~~~------~-~~~~~~~~~~~~~~v~dt~GaGD~f~a~~~~~l~~ 238 (289)
T 3pzs_A 177 GPKVVLVKHLSRAGYHADCFEMLLVT------A-DDAWHICRPLVDFGKRQPVGVGDLTSGLLLVNLLK 238 (289)
T ss_dssp SCSEEEECCCGGGSSCTTEEEEEEEC------S-SCEEEEEEECCCCTTSCCTTHHHHHHHHHHHHHHT
T ss_pred CCCEEEEecccCCCCCCCeEEEEEEe------C-CeEEEEEeeeecCCCCCCCcHHHHHHHHHHHHHHC
Confidence 56788998754332 23333322222 1 2356677788875 4999999999999888764
No 75
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=71.15 E-value=5.2 Score=35.95 Aligned_cols=57 Identities=21% Similarity=0.376 Sum_probs=36.7
Q ss_pred ece-EEEEEEeeeecCCCCceEEEEecceeccCCCeeEEEEEEceecceeeechHHHHHHHHHHHhh
Q psy11349 13 IRT-TLVVIATQILQRDPSALTCKEKELKLIQSGSKTTVSINIPQFDASFTGTGDLFAALMLAYITR 78 (360)
Q Consensus 13 ~~~-~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~f~G~gd~~~~~l~~~~~~ 78 (360)
+.. ..|++|.-. ..+ ..-+.... .+ .+.+.+..|+++..++|+||.|+|.+++.+.+
T Consensus 170 ~g~~~~Vvvt~G~-~~~--~~g~~~~~-----~~-~~~~~~~~~~v~~dt~GaGD~fsaai~a~l~~ 227 (282)
T 3h74_A 170 LKTGAHAVITDVQ-RAD--QIGCAWLD-----EA-GHVQYCGARRLPGHYNGTGDTLAAVIAGLLGR 227 (282)
T ss_dssp SCTTCEECEEEEE-ETT--EEEEEEEC-----TT-SCEEEEEEECCSSCCTTHHHHHHHHHHHHHHT
T ss_pred hCCCCEEEEEecC-CCC--ceEEEEEe-----CC-CeEEEEEecCCCCCCcCHHHHHHHHHHHHHHC
Confidence 455 788999765 221 12222221 11 13456677788888999999999999888764
No 76
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=66.69 E-value=62 Score=31.17 Aligned_cols=106 Identities=15% Similarity=0.118 Sum_probs=64.7
Q ss_pred HHHHHHHHHHhhhCCCCccCE-EEEeee--CC---HHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHH
Q psy11349 142 EQDFDELIEGLKMNDLMDYTH-VLTGYC--RS---PQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIY 215 (360)
Q Consensus 142 ~~~l~~ll~~~~~~~~~~~d~-i~~G~l--~~---~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~ 215 (360)
.+++.+.++.+.. ++|. |++|+= .. +...+...+.++.++. +++++-+.-. .+.+.+..+.+
T Consensus 215 ~e~f~~~l~e~~~----~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~--~~~~iH~E~A------s~~~~~l~~~i 282 (457)
T 1l2l_A 215 REEWIERFEEIAK----RSELAIISGLHPLTQENHGKPIKLVREHLKILND--LGIRAHLEFA------FTPDEVVRLEI 282 (457)
T ss_dssp CHHHHHSHHHHHT----TCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHH--TTCEEEEECC------CCSSHHHHHHH
T ss_pred cHHHHHHHHhhcc----CCCEEEEeccccccccchhhhHHHHHHHHHHhcC--CCCeEEEEEC------CcccHHHHHHH
Confidence 4556666665321 4884 566763 33 3323333344444433 5588877642 34556777888
Q ss_pred HHhhcccceEEeCCHHHHHhc---cCC----------CCCCHHHHHHHHHHHHhc-CCC
Q psy11349 216 ANELLSVADVICPNQFEAELL---TKI----------PIKDKASLLKTINVLHDR-GIK 260 (360)
Q Consensus 216 ~~~ll~~~diitpN~~E~~~L---~g~----------~~~~~~d~~~aa~~l~~~-g~~ 260 (360)
. .++|++|.+=.|+.|+..+ .|. +..+..+..+++.+|.+. +..
T Consensus 283 ~-~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~~~~~~v~~v~~~~~~ll~~~~l~ 340 (457)
T 1l2l_A 283 V-KLLKHFYSVGLNEVELASVVSVMGEKELAERIISKDPADPIAVIEGLLKLIKETGVK 340 (457)
T ss_dssp H-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCS
T ss_pred H-hhccccccCccCHHHHHHHHHHcCCcccccccccCCccCHHHHHHHHHHHHHhcCCC
Confidence 7 8999999999999999875 231 112256677777777663 554
No 77
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=61.28 E-value=23 Score=34.14 Aligned_cols=107 Identities=14% Similarity=0.175 Sum_probs=64.3
Q ss_pred HHHHHHHHHhhhCCCCccCEE-EEeee--CCH---HHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHH
Q psy11349 143 QDFDELIEGLKMNDLMDYTHV-LTGYC--RSP---QLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYA 216 (360)
Q Consensus 143 ~~l~~ll~~~~~~~~~~~d~i-~~G~l--~~~---~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~ 216 (360)
+++.+.++.+.. ++|.+ ++|+- ... +..+...+.++.+. ++++++-++.. .+.+.+..+.+.
T Consensus 213 e~f~~~l~e~~~----~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~--~~~~~iH~ElA------s~~~~~~~~~i~ 280 (455)
T 1ua4_A 213 EEFRESFSEVIK----NVQLAILSGLQALTKENYKEPFEIVKSNLEVLN--EREIPVHLEFA------FTPDEKVREEIL 280 (455)
T ss_dssp GGGSTTHHHHGG----GCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHH--HTTCCEEEECC------CCCCHHHHHHHH
T ss_pred HHHHHHHHhhcc----CCcEEEEechhcccccchHHHHHHHHHHHHHhc--CCCceEEEEeC------CccCHHHHHHHH
Confidence 445554444321 47855 55542 222 33444444334443 35588888863 344567767777
Q ss_pred HhhcccceEEeCCHHHHHhccCC--------C--C---CCHHHHHHHHHHHHhc-CCCEE
Q psy11349 217 NELLSVADVICPNQFEAELLTKI--------P--I---KDKASLLKTINVLHDR-GIKTV 262 (360)
Q Consensus 217 ~~ll~~~diitpN~~E~~~L~g~--------~--~---~~~~d~~~aa~~l~~~-g~~~V 262 (360)
.+++++|.+-.|+.|+..+.+. . . .+..+..+++.++.+. +...|
T Consensus 281 -~ilp~vDSlGmNE~EL~~l~~~lg~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~l~ri 339 (455)
T 1ua4_A 281 -NVLGMFYSVGLNEVELASIMEILGEKKLAKELLAHDPVDPIAVTEAMLKLAKKTGVKRI 339 (455)
T ss_dssp -HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHTTSSSSCCHHHHHHHHHHHHHHHCCSEE
T ss_pred -hhhccCcccccCHHHHHHHHHHhCCCccccccccCCccCHHHHHHHHHHHHHHcCCCEE
Confidence 8999999999999999877532 1 1 2267777777777663 55433
No 78
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=56.88 E-value=18 Score=32.02 Aligned_cols=58 Identities=17% Similarity=0.300 Sum_probs=32.0
Q ss_pred ceEEEEEEeeeecCCCCceEEEEecceeccCCCeeEEEEEEceecceeeechHHHHHHHHHHHhh
Q psy11349 14 RTTLVVIATQILQRDPSALTCKEKELKLIQSGSKTTVSINIPQFDASFTGTGDLFAALMLAYITR 78 (360)
Q Consensus 14 ~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~f~G~gd~~~~~l~~~~~~ 78 (360)
.+.+|++|.-.-..+++.+-+.... . . ..+.+..|......+|.||.|++.++..+.+
T Consensus 188 g~~~Vvvt~G~~~~~~~~~G~~~~~-----~-~-~~~~~~~~~v~vdt~GAGDaf~a~~~~~l~~ 245 (283)
T 2ddm_A 188 TLKWVVVTSASGNEENQEMQVVVVT-----A-D-SVNVISHSRVKTDLKGTGDLFCAQLISGLLK 245 (283)
T ss_dssp SCCEEEEEC-------CEEEEEEEE-----T-T-EEEEEEEECCCCCCCCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEccccCccCCCceeEEEEe-----C-C-ceEEEeeceeCCCCCChHHHHHHHHHHHHHc
Confidence 5677888854432222332222221 1 1 2345555555667799999999999887754
No 79
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=42.13 E-value=39 Score=32.70 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=63.1
Q ss_pred HHHHHHHHHHhhhCCCCccCE-EEEeee--CC----HH-HHHHHHHHHHHHHh-cCCCceEEEccccccCCCCCCCcCcH
Q psy11349 142 EQDFDELIEGLKMNDLMDYTH-VLTGYC--RS----PQ-LLSKIGELVKELKK-ANPTLMYVCDPVMGDNGRMYVPEEVL 212 (360)
Q Consensus 142 ~~~l~~ll~~~~~~~~~~~d~-i~~G~l--~~----~~-~~~~i~~~l~~~~~-~~~~~~vv~Dpv~~~~g~~~~~~~~~ 212 (360)
.+++...++.+.. ++|. |++|+= .. .+ ..+.+.++.+.++. .++++++-+.-. .+.+.+..
T Consensus 220 ~e~f~~~l~e~~~----~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~~~~~~iH~E~A------s~~~~~l~ 289 (467)
T 1gc5_A 220 RREFREGFEEITR----NVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNRYNVKSHFEFA------YTANRRVR 289 (467)
T ss_dssp CHHHHHSHHHHHT----TCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECC------CCCCHHHH
T ss_pred cHHHHHHHHhhcc----CCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhcCCCCeEEEEEC------CcccHHHH
Confidence 4556666666331 4885 456652 22 12 22333333333333 346688877642 34556788
Q ss_pred HHHHHhhcccceEEeCCHHHHHhcc---CCCC-------CCHHHHHHHHHHHHhc-CCC
Q psy11349 213 PIYANELLSVADVICPNQFEAELLT---KIPI-------KDKASLLKTINVLHDR-GIK 260 (360)
Q Consensus 213 ~~~~~~ll~~~diitpN~~E~~~L~---g~~~-------~~~~d~~~aa~~l~~~-g~~ 260 (360)
+.+. .++|++|.+=.|+.|+..+. |.+. .+..+..+++..+.+. +..
T Consensus 290 ~~i~-~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~p~v~~v~~~~~~ll~~~~l~ 347 (467)
T 1gc5_A 290 EALV-ELLPKFTSVGLNEVELASIMEIIGDEELAKEVLEGHIFSVIDAMNVLMDETGIE 347 (467)
T ss_dssp HHHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHHHHHHHHCCS
T ss_pred HHHH-hhccccccCccCHHHHHHHHHHcCCCcccccccCCCHHHHHHHHHHHHHhcCCC
Confidence 8887 89999999999999998543 3210 1145666677666653 444
No 80
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=36.55 E-value=28 Score=33.64 Aligned_cols=30 Identities=17% Similarity=0.171 Sum_probs=20.2
Q ss_pred EEEEEeccc--CCcccCchHHH-HHHHHHHHHc
Q psy11349 289 TVSINIPQF--DASFTGTGDLF-AALMLAYITR 318 (360)
Q Consensus 289 ~~~~~~~~v--~~~t~GaGD~f-~a~~~a~L~~ 318 (360)
...+|..-+ |..|+|-||++ +++|++.|+.
T Consensus 421 i~~~P~lv~~~P~~TVGlGDtiSa~gf~~~l~~ 453 (455)
T 1ua4_A 421 IAFIPTKIVAKPKSTVGIGDTISSSAFIGEFSF 453 (455)
T ss_dssp EEEEECBCCSSCSCCTTHHHHHHHHHHHHHHHT
T ss_pred EEEEehhhcCCCCceecCCcchhhHHHHHHHHh
Confidence 334444333 23388999999 5599998875
No 81
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=36.43 E-value=28 Score=33.73 Aligned_cols=19 Identities=21% Similarity=0.317 Sum_probs=15.7
Q ss_pred cccCchHHH-HHHHHHHHHc
Q psy11349 300 SFTGTGDLF-AALMLAYITR 318 (360)
Q Consensus 300 ~t~GaGD~f-~a~~~a~L~~ 318 (360)
.|+|-||++ +|+|++.|+.
T Consensus 445 ~TVGLGDtISa~gfv~~l~~ 464 (467)
T 1gc5_A 445 STVGIGDTISSSAFVSEFGM 464 (467)
T ss_dssp CCSSHHHHHHHHHHHHHHHH
T ss_pred ceecCCcchhhHHHHHHHHH
Confidence 388999999 5599988864
No 82
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=34.29 E-value=28 Score=33.64 Aligned_cols=19 Identities=21% Similarity=0.354 Sum_probs=13.3
Q ss_pred cccCchHHH-HHHHHHHHHc
Q psy11349 300 SFTGTGDLF-AALMLAYITR 318 (360)
Q Consensus 300 ~t~GaGD~f-~a~~~a~L~~ 318 (360)
.|+|-||++ +++|++.|+.
T Consensus 437 ~TVGLGDtISa~gfv~~l~~ 456 (457)
T 1l2l_A 437 STVGIGDTISSSAFVSEFSL 456 (457)
T ss_dssp ---CTTHHHHHHHHHHHHHH
T ss_pred ceecCCcchhhHHHHHHHhc
Confidence 388999999 5589888763
No 83
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=33.56 E-value=41 Score=30.49 Aligned_cols=59 Identities=14% Similarity=0.031 Sum_probs=33.5
Q ss_pred eceEEEEEEeeeecCCCCceEEEEecceeccCCCeeEEEEEEceec-ceeeechHHHHHHHHHHHhh
Q psy11349 13 IRTTLVVIATQILQRDPSALTCKEKELKLIQSGSKTTVSINIPQFD-ASFTGTGDLFAALMLAYITR 78 (360)
Q Consensus 13 ~~~~~v~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~f~G~gd~~~~~l~~~~~~ 78 (360)
+++..|+||.-.-..+.+.+.+.... .+ ..+.+..|+.+ ...+|.||.|.|-++..+.+
T Consensus 233 ~g~~~vvvT~G~~G~~~~~~g~~~~~-----~~--~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~ 292 (346)
T 3ktn_A 233 YNLEWFAGTTRSHSQNQNYLSGYLYT-----QN--EYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQ 292 (346)
T ss_dssp HTCSEEEEEEEEECSSCEEEEEEEEC-----SS--CEEECCCEECCCSCCTTHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEecCccccccCcceEEEEE-----CC--ceEEeCCCccccCCCCchhHHHHHHHHHHHHc
Confidence 46788888854433233333333322 11 22333333333 45799999999988877754
No 84
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=33.03 E-value=1.4e+02 Score=28.60 Aligned_cols=65 Identities=17% Similarity=0.291 Sum_probs=43.8
Q ss_pred ccccCCHHHHHHHHHHhhhCCCCccCEEEEeeeCCHHHHHHHHHHHHHHHhcCCCceEEEcccccc
Q psy11349 136 KGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANPTLMYVCDPVMGD 201 (360)
Q Consensus 136 ~g~~l~~~~l~~ll~~~~~~~~~~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~ 201 (360)
.|+..+++++-.+++.+.-... .-.+.+|--++.....+.+-.+++..++.|..+.++|||.-+.
T Consensus 307 vGP~~~p~elv~L~~~LnP~~e-pGRlTLI~RmGa~kv~~~LP~li~aV~~~G~~VvW~cDPMHGN 371 (462)
T 3rzi_A 307 LGPNMTPELAVEYVERLDPHNK-PGRLTLVSRMGNHKVRDLLPPIVEKVQATGHQVIWQCDPMHGN 371 (462)
T ss_dssp ECTTCCHHHHHHHHHHHCTTCC-TTSEEEEECCCTTTHHHHHHHHHHHHHHTSCCCEEEECCSTTS
T ss_pred ECCCCCHHHHHHHHHHhCCCCC-CCeEEEEEccCCchhhhhHHHHHHHHHHCCCCeEEEeCCCCCC
Confidence 4677788888888888763321 1235555445444445667778888888887789999996543
No 85
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=29.20 E-value=1.2e+02 Score=25.62 Aligned_cols=81 Identities=19% Similarity=0.196 Sum_probs=45.3
Q ss_pred cccCCHHHHHHHHHHhhhCCCCccCEEEE-eeeCCHHHHHHHHHHHHHHHhcCC--CceEEEccccccCCCCCCCcCcHH
Q psy11349 137 GKVITEQDFDELIEGLKMNDLMDYTHVLT-GYCRSPQLLSKIGELVKELKKANP--TLMYVCDPVMGDNGRMYVPEEVLP 213 (360)
Q Consensus 137 g~~l~~~~l~~ll~~~~~~~~~~~d~i~~-G~l~~~~~~~~i~~~l~~~~~~~~--~~~vv~Dpv~~~~g~~~~~~~~~~ 213 (360)
|...+.+++-...... ++|+|.+ |+.........+.++++.+++.+. ++++++= |.. +.+++.
T Consensus 127 G~~vp~e~iv~~~~~~------~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vG------G~~-~~~~~a- 192 (215)
T 3ezx_A 127 GVDVLNENVVEEAAKH------KGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFG------GAP-VSDKWI- 192 (215)
T ss_dssp CSSCCHHHHHHHHHHT------TTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEE------SSS-CCHHHH-
T ss_pred CCCCCHHHHHHHHHHc------CCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEE------CCC-CCHHHH-
Confidence 4445556554433333 3786643 445455566778888888888774 4555542 211 222222
Q ss_pred HHHHhhcccceEEeCCHHHHHhc
Q psy11349 214 IYANELLSVADVICPNQFEAELL 236 (360)
Q Consensus 214 ~~~~~ll~~~diitpN~~E~~~L 236 (360)
+++ .+|...+|..|+-.+
T Consensus 193 ---~~i--Gad~~~~dA~~av~~ 210 (215)
T 3ezx_A 193 ---EEI--GADATAENAAEAAKV 210 (215)
T ss_dssp ---HHH--TCCBCCSSHHHHHHH
T ss_pred ---HHh--CCeEEECCHHHHHHH
Confidence 222 577777777776544
No 86
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=29.13 E-value=38 Score=30.31 Aligned_cols=31 Identities=45% Similarity=0.851 Sum_probs=23.7
Q ss_pred eEEEEEEceecceeeechHHHHHHHHHHHhh
Q psy11349 48 TTVSINIPQFDASFTGTGDLFAALMLAYITR 78 (360)
Q Consensus 48 ~~~~~~~p~~~~~f~G~gd~~~~~l~~~~~~ 78 (360)
..+.+..|+++...+|.||.|.|.++..+.+
T Consensus 217 ~~~~~~~~~v~vdttGAGDaf~a~~~~~l~~ 247 (312)
T 2yxt_A 217 ERIRMDIRKVDAVFVGTGDLFAAMLLAWTHK 247 (312)
T ss_dssp EEEEEEEECCSSCCSSHHHHHHHHHHHHHHH
T ss_pred ceEEEeecccCCCCCCchHHHHHHHHHHHHh
Confidence 3455666666667899999999999888764
No 87
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=25.61 E-value=2.8e+02 Score=24.75 Aligned_cols=74 Identities=18% Similarity=0.216 Sum_probs=47.4
Q ss_pred HHHHHHHhhhCCCCccCEEEEeeeC----CHHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHHHHHHhhc
Q psy11349 145 FDELIEGLKMNDLMDYTHVLTGYCR----SPQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLPIYANELL 220 (360)
Q Consensus 145 l~~ll~~~~~~~~~~~d~i~~G~l~----~~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~~~~~~ll 220 (360)
...+++.+.. .+.++|+|+-. ..+....+.++++.+++++ .+|++|.-..|= +...+.+.+.++
T Consensus 52 ~~~ivd~l~~----~v~~~Kvg~~lf~~~G~~G~~~l~~~i~~l~~~g--~~VflDlK~~DI------pnTv~~ya~~~~ 119 (284)
T 3l52_A 52 SRTVVEALGE----HVAVFKPQSAFFERFGSRGVAVLEKTVAEARAAG--ALVVMDAKRGDI------GSTMAAYAEAFL 119 (284)
T ss_dssp HHHHHHHHTT----TCSEEEEBHHHHHTTHHHHHHHHHHHHHHHHHTT--CEEEEEEEECCC------HHHHHHHHHHHS
T ss_pred HHHHHHHhCC----cceEEEeeHHHHHhcCHHHHHHHHHHHHHHHHCC--CcEEEEecccCc------HHHHHHHHHHHh
Confidence 4455555542 36689998542 3445677888888888877 899999855441 233444444444
Q ss_pred c-----cceEEeCCH
Q psy11349 221 S-----VADVICPNQ 230 (360)
Q Consensus 221 ~-----~~diitpN~ 230 (360)
. .+|.+|.|.
T Consensus 120 ~~~~~lg~D~vTvh~ 134 (284)
T 3l52_A 120 RKDSPLFSDALTVSP 134 (284)
T ss_dssp STTSTTCCSEEEECC
T ss_pred ccccccCCcEEEEec
Confidence 2 389999875
No 88
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=24.08 E-value=3.6e+02 Score=25.08 Aligned_cols=107 Identities=13% Similarity=0.150 Sum_probs=61.8
Q ss_pred CHHHHHHHHHHhhhCCCCccCEEEEeeeCC--------HHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcH
Q psy11349 141 TEQDFDELIEGLKMNDLMDYTHVLTGYCRS--------PQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVL 212 (360)
Q Consensus 141 ~~~~l~~ll~~~~~~~~~~~d~i~~G~l~~--------~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~ 212 (360)
+.++..++.+.++.. .+++++.|..-+ ....+-+..+.+.+++.| ++++.+|- +++.+
T Consensus 154 s~e~a~~~a~~~k~a---Ga~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~G--l~~~te~~---------d~~~~ 219 (385)
T 3nvt_A 154 SYEQVAAVAESIKAK---GLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYG--LGVISEIV---------TPADI 219 (385)
T ss_dssp CHHHHHHHHHHHHHT---TCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEECC---------SGGGH
T ss_pred CHHHHHHHHHHHHHc---CCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcC--CEEEEecC---------CHHHH
Confidence 345555666666654 477888775310 001233333334455667 89998882 12233
Q ss_pred HHHHHhhcccceEEeCCHHHH------Hhc--cCCCC-------CCHHHHHHHHHHHHhcCCCEEEEe
Q psy11349 213 PIYANELLSVADVICPNQFEA------ELL--TKIPI-------KDKASLLKTINVLHDRGIKTVVIS 265 (360)
Q Consensus 213 ~~~~~~ll~~~diitpN~~E~------~~L--~g~~~-------~~~~d~~~aa~~l~~~g~~~Vlvt 265 (360)
+ .+...+|+++....+. +.+ +|.++ .+.+++..+++.+.+.|...|++.
T Consensus 220 ~----~l~~~vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 220 E----VALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp H----HHTTTCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred H----HHHhhCCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 2 2334578887755553 222 23322 467899999999988888766666
No 89
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=21.27 E-value=98 Score=23.50 Aligned_cols=28 Identities=21% Similarity=0.167 Sum_probs=24.6
Q ss_pred ccCchHHHHHHHHHHHHcCC-CCHHHHHHH
Q psy11349 301 FTGTGDLFAALMLAYITRTN-HNVKESLER 329 (360)
Q Consensus 301 t~GaGD~f~a~~~a~L~~~g-~~l~~A~~~ 329 (360)
.+|-||..-|.|++++.+ | .+.+||++.
T Consensus 66 Kh~kGd~aEA~iAyAWle-G~is~eEavei 94 (133)
T 1ztd_A 66 KHAKGDYAEALIAKAWLM-GLISEREAVEI 94 (133)
T ss_dssp TTCHHHHHHHHHHHHHHT-TSSCHHHHHHH
T ss_pred ccCccHHHHHHHHHHHHh-ccccHHHHHHH
Confidence 689999999999999999 7 688888754
No 90
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=21.08 E-value=60 Score=28.63 Aligned_cols=30 Identities=23% Similarity=0.352 Sum_probs=19.8
Q ss_pred EEEEEEceecc-eeeechHHHHHHHHHHHhh
Q psy11349 49 TVSINIPQFDA-SFTGTGDLFAALMLAYITR 78 (360)
Q Consensus 49 ~~~~~~p~~~~-~f~G~gd~~~~~l~~~~~~ 78 (360)
.+.+..|..+. ..+|.||.|++.+++.+.+
T Consensus 217 ~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~ 247 (288)
T 1jxh_A 217 EQRFSAPRVNTKNTHGTGCTLSAALAALRPR 247 (288)
T ss_dssp EEEC---CCCCSCCBTHHHHHHHHHHHHGGG
T ss_pred EEEEeccccCCCCCCCchHHHHHHHHHHHHc
Confidence 34444455553 5899999999989887754
No 91
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=21.01 E-value=2.3e+02 Score=22.58 Aligned_cols=64 Identities=17% Similarity=0.116 Sum_probs=36.5
Q ss_pred hhhhcCeeeeeeeeeeecCCCCCCccccccCCHHHHHHHHHHhhhCCCCccCEEEEeeeCCHHHHHHHHHHHHHHHhcCC
Q psy11349 110 QYEVLGFEVDAINTVQFSNHSGYGHLKGKVITEQDFDELIEGLKMNDLMDYTHVLTGYCRSPQLLSKIGELVKELKKANP 189 (360)
Q Consensus 110 ~l~~~G~~~~~i~t~~~s~~~~~~~~~g~~l~~~~l~~ll~~~~~~~~~~~d~i~~G~l~~~~~~~~i~~~l~~~~~~~~ 189 (360)
.|+..|+++..+ |...+.+++-...... ++|+|.+..+.. .....+.++++.+++.++
T Consensus 41 ~l~~~G~eVi~l---------------G~~~p~e~lv~aa~~~------~~diV~lS~~~~-~~~~~~~~~i~~L~~~g~ 98 (161)
T 2yxb_A 41 ALRDAGFEVVYT---------------GLRQTPEQVAMAAVQE------DVDVIGVSILNG-AHLHLMKRLMAKLRELGA 98 (161)
T ss_dssp HHHHTTCEEECC---------------CSBCCHHHHHHHHHHT------TCSEEEEEESSS-CHHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCEEEEC---------------CCCCCHHHHHHHHHhc------CCCEEEEEeech-hhHHHHHHHHHHHHhcCC
Confidence 467778866532 2234455555444444 388776544422 345666777777777663
Q ss_pred -CceEEE
Q psy11349 190 -TLMYVC 195 (360)
Q Consensus 190 -~~~vv~ 195 (360)
++++++
T Consensus 99 ~~i~v~v 105 (161)
T 2yxb_A 99 DDIPVVL 105 (161)
T ss_dssp TTSCEEE
T ss_pred CCCEEEE
Confidence 466554
No 92
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=20.74 E-value=2.3e+02 Score=25.39 Aligned_cols=99 Identities=19% Similarity=0.123 Sum_probs=55.6
Q ss_pred ccCEEE-EeeeCC----HHHHHHHHHHHHHHHhcCCCceEEEccccccCCCCCCC---c-CcHHH-HHHhhc-ccceEEe
Q psy11349 159 DYTHVL-TGYCRS----PQLLSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVP---E-EVLPI-YANELL-SVADVIC 227 (360)
Q Consensus 159 ~~d~i~-~G~l~~----~~~~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~---~-~~~~~-~~~~ll-~~~diit 227 (360)
.+|++. ++++.+ .++.+.+.++.+.+++.| +++++++..+.. ..-+ + +.+.. .+ ... -.+|+++
T Consensus 121 GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G--~p~lv~~~~~g~--~v~~~~~~~~~v~~aa~-~a~~lGaD~iK 195 (304)
T 1to3_A 121 GAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNG--LLSIIEPVVRPP--RCGDKFDREQAIIDAAK-ELGDSGADLYK 195 (304)
T ss_dssp TCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTT--CEEEEEEEECCC--SSCSCCCHHHHHHHHHH-HHTTSSCSEEE
T ss_pred CCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcC--CcEEEEEECCCC--ccccCCChhHHHHHHHH-HHHHcCCCEEE
Confidence 478774 454432 345567777888888877 899999754432 1111 1 11221 22 222 2679998
Q ss_pred CCHHHHHhccCCCCCCHHHHHHHHHHHHhc-CCCEEEEeccc
Q psy11349 228 PNQFEAELLTKIPIKDKASLLKTINVLHDR-GIKTVVISSSE 268 (360)
Q Consensus 228 pN~~E~~~L~g~~~~~~~d~~~aa~~l~~~-g~~~Vlvtg~~ 268 (360)
.+..... ++ +.+++.+.++..... +.+.|++.|+.
T Consensus 196 v~~~~~~--~g----~~~~~~~vv~~~~~~~~~P~Vv~aGG~ 231 (304)
T 1to3_A 196 VEMPLYG--KG----ARSDLLTASQRLNGHINMPWVILSSGV 231 (304)
T ss_dssp ECCGGGG--CS----CHHHHHHHHHHHHHTCCSCEEECCTTS
T ss_pred eCCCcCC--CC----CHHHHHHHHHhccccCCCCeEEEecCC
Confidence 7764221 12 346666666665543 45558888764
No 93
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=20.55 E-value=4.2e+02 Score=23.03 Aligned_cols=106 Identities=10% Similarity=0.126 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhhhCCCCccCEEEEeeeCCHHH--------HHHHHHHHHHHHhcCCCceEEEccccccCCCCCCCcCcHH
Q psy11349 142 EQDFDELIEGLKMNDLMDYTHVLTGYCRSPQL--------LSKIGELVKELKKANPTLMYVCDPVMGDNGRMYVPEEVLP 213 (360)
Q Consensus 142 ~~~l~~ll~~~~~~~~~~~d~i~~G~l~~~~~--------~~~i~~~l~~~~~~~~~~~vv~Dpv~~~~g~~~~~~~~~~ 213 (360)
.++..++.+.+++. .+++|+.++.-.... .+-+..+.+.+++.| ++++.+|- ++...+
T Consensus 36 ~e~a~~~a~~l~~~---Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~G--l~~~te~~---------d~~~~~ 101 (262)
T 1zco_A 36 REQIMKVAEFLAEV---GIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYG--LVTVTEVM---------DTRHVE 101 (262)
T ss_dssp HHHHHHHHHHHHHT---TCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEECC---------CGGGHH
T ss_pred HHHHHHHHHHHHHc---CCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcC--CcEEEeeC---------CHHhHH
Confidence 44455555555554 477888776521100 223333333445667 89998872 122233
Q ss_pred HHHHhhcccceEEeCCHHHHHh------c--cCCCC------C-CHHHHHHHHHHHHhcCCCEEEEe
Q psy11349 214 IYANELLSVADVICPNQFEAEL------L--TKIPI------K-DKASLLKTINVLHDRGIKTVVIS 265 (360)
Q Consensus 214 ~~~~~ll~~~diitpN~~E~~~------L--~g~~~------~-~~~d~~~aa~~l~~~g~~~Vlvt 265 (360)
.+ ...+|+++....+... + +|.++ . +.+++.++++.+...|.+.+++.
T Consensus 102 ~l----~~~vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~ 164 (262)
T 1zco_A 102 LV----AKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILC 164 (262)
T ss_dssp HH----HHHCSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred HH----HhhCCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEE
Confidence 32 2237887765554322 2 24332 2 67899999999988887666665
No 94
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=20.50 E-value=70 Score=27.72 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=22.5
Q ss_pred EEEEEEceecc-eeeechHHHHHHHHHHHhh
Q psy11349 49 TVSINIPQFDA-SFTGTGDLFAALMLAYITR 78 (360)
Q Consensus 49 ~~~~~~p~~~~-~f~G~gd~~~~~l~~~~~~ 78 (360)
.+.+..|..+. ..+|.||.|++.+++.+.+
T Consensus 198 ~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 228 (271)
T 2i5b_A 198 AEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (271)
T ss_dssp EEEEEECCCCCSCCBTHHHHHHHHHHHHHHT
T ss_pred EEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 45566666655 6799999999999887754
Done!