Query psy1135
Match_columns 124
No_of_seqs 103 out of 1341
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 16:08:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1135.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1135hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.8 6E-19 2.1E-23 132.6 7.5 92 32-123 28-124 (510)
2 1u19_A Rhodopsin; G protein-co 99.8 2.8E-18 9.6E-23 121.9 9.6 93 31-123 33-125 (349)
3 2ks9_A Substance-P receptor; w 99.7 9.9E-18 3.4E-22 120.1 11.0 88 36-123 32-119 (364)
4 2rh1_A Beta-2-adrenergic recep 99.7 4.5E-18 1.5E-22 127.3 8.3 92 32-123 36-127 (500)
5 2lnl_A C-X-C chemokine recepto 99.7 1.4E-17 4.7E-22 116.7 9.5 88 34-123 9-96 (296)
6 3uon_A Human M2 muscarinic ace 99.7 7.7E-18 2.6E-22 123.9 8.1 90 34-123 21-110 (467)
7 3pbl_A D(3) dopamine receptor, 99.7 8.9E-18 3E-22 124.1 5.8 90 34-123 36-126 (481)
8 4dkl_A MU-type opioid receptor 99.7 8.6E-17 2.9E-21 118.1 9.2 90 33-123 14-103 (464)
9 3odu_A C-X-C chemokine recepto 99.7 2.3E-16 7.9E-21 117.1 8.1 90 32-123 44-133 (502)
10 3rze_A Histamine H1 receptor, 99.6 1.2E-16 4.3E-21 117.0 5.8 87 37-123 9-95 (452)
11 4amj_A Beta-1 adrenergic recep 99.6 1.2E-16 4.2E-21 111.7 5.4 91 33-123 8-98 (315)
12 3sn6_R Lysozyme, beta-2 adrene 99.6 4E-17 1.4E-21 122.4 2.9 91 33-123 179-269 (514)
13 3v2y_A Sphingosine 1-phosphate 99.6 5.5E-16 1.9E-20 116.6 8.9 86 37-123 64-149 (520)
14 3vw7_A Proteinase-activated re 99.6 4.4E-16 1.5E-20 115.1 8.0 91 32-123 16-107 (484)
15 4eiy_A Adenosine receptor A2A/ 99.6 6.4E-16 2.2E-20 113.0 8.7 92 30-123 25-116 (447)
16 4ea3_A Fusion protein of nocic 99.6 7.1E-16 2.4E-20 113.4 8.3 91 32-123 121-211 (434)
17 3eml_A Human adenosine A2A rec 99.6 4E-16 1.4E-20 115.2 6.9 87 35-123 20-106 (488)
18 2z73_A Rhodopsin; visual pigme 99.6 9.7E-16 3.3E-20 112.8 7.9 90 34-123 32-122 (448)
19 2lot_A Apelin receptor; membra 97.5 4.2E-06 1.4E-10 45.9 -2.0 31 38-68 30-60 (64)
20 3arc_I Photosystem II reaction 38.4 34 0.0012 16.1 2.7 17 38-54 10-26 (38)
21 2ks1_B Epidermal growth factor 25.7 67 0.0023 15.7 4.0 13 56-68 29-41 (44)
22 2l2t_A Receptor tyrosine-prote 25.2 69 0.0024 15.6 4.0 13 56-68 28-40 (44)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.77 E-value=6e-19 Score=132.56 Aligned_cols=92 Identities=14% Similarity=0.230 Sum_probs=77.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc---CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccccccc
Q psy1135 32 LLNVYVFFIILYGVTILSGVALNIFAIYHIIVERLF---RDATCGYFINIALADIIKCMFVLPITLMVTLV--QNWTWGS 106 (124)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l---~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~--~~w~~g~ 106 (124)
....+++..++|.+++++|++||++|++++.+.|++ |+++|+|++|||+||++++++.+|+.+..... +.|.+|+
T Consensus 28 ~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~ 107 (510)
T 4grv_A 28 DIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGD 107 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhH
Confidence 345667888999999999999999999999887654 58899999999999999999999998887654 4699999
Q ss_pred ccccccchhhhhhhccc
Q psy1135 107 FLCYFLPMLQLIPFRIY 123 (124)
Q Consensus 107 ~~C~~~~~~~~~~~~~S 123 (124)
.+|++..++..++.++|
T Consensus 108 ~~C~~~~~~~~~~~~~S 124 (510)
T 4grv_A 108 AGCRGYYFLRDACTYAT 124 (510)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999888877665
No 2
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.76 E-value=2.8e-18 Score=121.91 Aligned_cols=93 Identities=16% Similarity=0.238 Sum_probs=82.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Q psy1135 31 TLLNVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCY 110 (124)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~ 110 (124)
..+....+..+++.+++++|++||+++++++.++|++|++.|+++.|||++|++.++...|..+.....+.|.+|...|+
T Consensus 33 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~ 112 (349)
T 1u19_A 33 AEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCN 112 (349)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHH
Confidence 34556667888999999999999999999999999999999999999999999999989999888888889999999999
Q ss_pred ccchhhhhhhccc
Q psy1135 111 FLPMLQLIPFRIY 123 (124)
Q Consensus 111 ~~~~~~~~~~~~S 123 (124)
+..++...+..+|
T Consensus 113 ~~~~~~~~~~~~s 125 (349)
T 1u19_A 113 LEGFFATLGGEIA 125 (349)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9988877765544
No 3
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.75 E-value=9.9e-18 Score=120.06 Aligned_cols=88 Identities=19% Similarity=0.434 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchh
Q psy1135 36 YVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCYFLPML 115 (124)
Q Consensus 36 ~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~~~~~~ 115 (124)
..+..+++.+++++|++||+++++++.++|++|+++|+|+.|||++|++.++...|..+.....++|.+|+..|++..++
T Consensus 32 ~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 111 (364)
T 2ks9_A 32 IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFF 111 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHH
Confidence 34557889999999999999999999999999999999999999999999999999988888888999999999999887
Q ss_pred hhhhhccc
Q psy1135 116 QLIPFRIY 123 (124)
Q Consensus 116 ~~~~~~~S 123 (124)
..++..+|
T Consensus 112 ~~~~~~~s 119 (364)
T 2ks9_A 112 PIAAVFAS 119 (364)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77765544
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.74 E-value=4.5e-18 Score=127.28 Aligned_cols=92 Identities=22% Similarity=0.292 Sum_probs=83.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Q psy1135 32 LLNVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCYF 111 (124)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~~ 111 (124)
...+..+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+...+.+.|.+|...|++
T Consensus 36 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~ 115 (500)
T 2rh1_A 36 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEF 115 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhH
Confidence 34566778899999999999999999999999999999999999999999999999999999998888999999999999
Q ss_pred cchhhhhhhccc
Q psy1135 112 LPMLQLIPFRIY 123 (124)
Q Consensus 112 ~~~~~~~~~~~S 123 (124)
..++..++.++|
T Consensus 116 ~~~~~~~~~~~S 127 (500)
T 2rh1_A 116 WTSIDVLCVTAS 127 (500)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 988877766554
No 5
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.73 E-value=1.4e-17 Score=116.70 Aligned_cols=88 Identities=30% Similarity=0.488 Sum_probs=76.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc
Q psy1135 34 NVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCYFLP 113 (124)
Q Consensus 34 ~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~~~~ 113 (124)
..+.+..++|.+++++|++||+++++++.++|++|+++|+|+.|||++|+++++ ..|+..... .++|.+|+..|+...
T Consensus 9 ~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~-~~~~~~~~~~c~~~~ 86 (296)
T 2lnl_A 9 LNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASK-VNGWIFGTFLCKVVS 86 (296)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHH-HSSSCCSSHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhc-cCCCccchhHHHHHh
Confidence 345677889999999999999999999999999999999999999999999765 677776654 457999999999999
Q ss_pred hhhhhhhccc
Q psy1135 114 MLQLIPFRIY 123 (124)
Q Consensus 114 ~~~~~~~~~S 123 (124)
+....+..+|
T Consensus 87 ~~~~~~~~~s 96 (296)
T 2lnl_A 87 LLKEVNFYSG 96 (296)
T ss_dssp HHHHHHHHHH
T ss_pred hhhhhhHHHH
Confidence 8887776654
No 6
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.73 E-value=7.7e-18 Score=123.87 Aligned_cols=90 Identities=21% Similarity=0.373 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc
Q psy1135 34 NVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCYFLP 113 (124)
Q Consensus 34 ~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~~~~ 113 (124)
....+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+++.+|+.+.....+.|.+|...|++..
T Consensus 21 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 100 (467)
T 3uon_A 21 FEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWL 100 (467)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHH
Confidence 34567788999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred hhhhhhhccc
Q psy1135 114 MLQLIPFRIY 123 (124)
Q Consensus 114 ~~~~~~~~~S 123 (124)
++..++.++|
T Consensus 101 ~~~~~~~~~s 110 (467)
T 3uon_A 101 ALDYVVSNAS 110 (467)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9887776654
No 7
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.71 E-value=8.9e-18 Score=124.08 Aligned_cols=90 Identities=18% Similarity=0.339 Sum_probs=77.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccccccccccc
Q psy1135 34 NVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLV-QNWTWGSFLCYFL 112 (124)
Q Consensus 34 ~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~-~~w~~g~~~C~~~ 112 (124)
..+.+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+++.+|+.+..... +.|.+|...|++.
T Consensus 36 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~ 115 (481)
T 3pbl_A 36 RPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVF 115 (481)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhH
Confidence 345566788999999999999999999999999999999999999999999999999998877776 5799999999999
Q ss_pred chhhhhhhccc
Q psy1135 113 PMLQLIPFRIY 123 (124)
Q Consensus 113 ~~~~~~~~~~S 123 (124)
.++..++.++|
T Consensus 116 ~~~~~~~~~~s 126 (481)
T 3pbl_A 116 VTLDVMMCTAS 126 (481)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 98877776654
No 8
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.69 E-value=8.6e-17 Score=118.07 Aligned_cols=90 Identities=23% Similarity=0.423 Sum_probs=81.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccc
Q psy1135 33 LNVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCYFL 112 (124)
Q Consensus 33 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~~~ 112 (124)
.....+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|+++++. +|+.+.....+.|.+|...|++.
T Consensus 14 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~ 92 (464)
T 4dkl_A 14 MVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIV 92 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhH
Confidence 44567888999999999999999999999999999999999999999999998775 99999999889999999999999
Q ss_pred chhhhhhhccc
Q psy1135 113 PMLQLIPFRIY 123 (124)
Q Consensus 113 ~~~~~~~~~~S 123 (124)
.++..++..+|
T Consensus 93 ~~~~~~~~~~s 103 (464)
T 4dkl_A 93 ISIDYYNMFTS 103 (464)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99887776654
No 9
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.66 E-value=2.3e-16 Score=117.05 Aligned_cols=90 Identities=21% Similarity=0.414 Sum_probs=79.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Q psy1135 32 LLNVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCYF 111 (124)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~~ 111 (124)
....+.+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|+++ ++.+|+.+..... +|.+|...|++
T Consensus 44 ~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~-~~~~p~~~~~~~~-~~~~~~~~C~~ 121 (502)
T 3odu_A 44 ANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLF-VITLPFWAVDAVA-NWYFGNFLCKA 121 (502)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHT-CCCSHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHhc-CCcCCchhhhh
Confidence 345677888999999999999999999999999999999999999999999998 4688998776554 79999999999
Q ss_pred cchhhhhhhccc
Q psy1135 112 LPMLQLIPFRIY 123 (124)
Q Consensus 112 ~~~~~~~~~~~S 123 (124)
..++..++..+|
T Consensus 122 ~~~~~~~~~~~s 133 (502)
T 3odu_A 122 VHVIYTVNLYSS 133 (502)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999887776654
No 10
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.65 E-value=1.2e-16 Score=116.99 Aligned_cols=87 Identities=22% Similarity=0.491 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchhh
Q psy1135 37 VFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCYFLPMLQ 116 (124)
Q Consensus 37 ~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~~~~~~~ 116 (124)
.+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+++.+|+.+.....++|.+|...|++..++.
T Consensus 9 ~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 88 (452)
T 3rze_A 9 MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMD 88 (452)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHH
Confidence 45567899999999999999999999999999999999999999999999999999999998899999999999999988
Q ss_pred hhhhccc
Q psy1135 117 LIPFRIY 123 (124)
Q Consensus 117 ~~~~~~S 123 (124)
.++.++|
T Consensus 89 ~~~~~~s 95 (452)
T 3rze_A 89 YVASTAS 95 (452)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776654
No 11
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.65 E-value=1.2e-16 Score=111.69 Aligned_cols=91 Identities=23% Similarity=0.372 Sum_probs=81.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccc
Q psy1135 33 LNVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCYFL 112 (124)
Q Consensus 33 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~~~ 112 (124)
...+....+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++...|..+.....++|.+|+..|++.
T Consensus 8 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 87 (315)
T 4amj_A 8 QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELW 87 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHH
Confidence 34566778899999999999999999999999999999999999999999998888999998888889999999999999
Q ss_pred chhhhhhhccc
Q psy1135 113 PMLQLIPFRIY 123 (124)
Q Consensus 113 ~~~~~~~~~~S 123 (124)
.++...+..+|
T Consensus 88 ~~~~~~~~~~S 98 (315)
T 4amj_A 88 TSLDVLCVTAS 98 (315)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 98877766554
No 12
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.64 E-value=4e-17 Score=122.44 Aligned_cols=91 Identities=22% Similarity=0.314 Sum_probs=82.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccc
Q psy1135 33 LNVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCYFL 112 (124)
Q Consensus 33 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~~~ 112 (124)
........+++.+++++|++||+++++++.++|++|++.|+|++|||++|++++++.+|+.+.....+.|.+|...|++.
T Consensus 179 ~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 258 (514)
T 3sn6_R 179 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFW 258 (514)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhH
Confidence 44566778899999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred chhhhhhhccc
Q psy1135 113 PMLQLIPFRIY 123 (124)
Q Consensus 113 ~~~~~~~~~~S 123 (124)
.++..++..+|
T Consensus 259 ~~l~~~~~~~S 269 (514)
T 3sn6_R 259 TSIDVLCVTAS 269 (514)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 98877766554
No 13
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.64 E-value=5.5e-16 Score=116.63 Aligned_cols=86 Identities=12% Similarity=0.126 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccchhh
Q psy1135 37 VFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCYFLPMLQ 116 (124)
Q Consensus 37 ~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~~~~~~~ 116 (124)
.+..++|.+++++|++||++|++++.+++++|+++|+|+.|||++|++++++..|..+.. ..+.|.++...|++..++.
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~~ 142 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGSM 142 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHHH
Confidence 678899999999999999999999999999999999999999999999999888887665 5668999999999998888
Q ss_pred hhhhccc
Q psy1135 117 LIPFRIY 123 (124)
Q Consensus 117 ~~~~~~S 123 (124)
.+++++|
T Consensus 143 ~~~~~~S 149 (520)
T 3v2y_A 143 FVALSAS 149 (520)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776655
No 14
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.64 E-value=4.4e-16 Score=115.09 Aligned_cols=91 Identities=23% Similarity=0.390 Sum_probs=78.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccccccccc
Q psy1135 32 LLNVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQ-NWTWGSFLCY 110 (124)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~-~w~~g~~~C~ 110 (124)
....+.+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|+++++ .+|+.+.....+ .|.+|...|+
T Consensus 16 ~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~-~~~~~~~~~~~~~~~~~~~~~C~ 94 (484)
T 3vw7_A 16 SSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVS-VLPFKISYYFSGSDWQFGSELCR 94 (484)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHT-THHHHHHHHHTTSCCCSCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCcccchhHHh
Confidence 34566788899999999999999999999999999999999999999999999865 566666666554 8999999999
Q ss_pred ccchhhhhhhccc
Q psy1135 111 FLPMLQLIPFRIY 123 (124)
Q Consensus 111 ~~~~~~~~~~~~S 123 (124)
+..++..++.++|
T Consensus 95 ~~~~~~~~~~~~S 107 (484)
T 3vw7_A 95 FVTAAFYCNMYAS 107 (484)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999887776654
No 15
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.64 E-value=6.4e-16 Score=113.05 Aligned_cols=92 Identities=12% Similarity=0.243 Sum_probs=79.0
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Q psy1135 30 PTLLNVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLC 109 (124)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C 109 (124)
........+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.+++.+|+.+... ..|.+|...|
T Consensus 25 ~~~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C 102 (447)
T 4eiy_A 25 APPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGC 102 (447)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHH
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHH
Confidence 33445666788999999999999999999999999999999999999999999999999999877643 3677899999
Q ss_pred cccchhhhhhhccc
Q psy1135 110 YFLPMLQLIPFRIY 123 (124)
Q Consensus 110 ~~~~~~~~~~~~~S 123 (124)
++..++..++.++|
T Consensus 103 ~~~~~~~~~~~~~S 116 (447)
T 4eiy_A 103 LFIACFVLVLTQSS 116 (447)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99998877766554
No 16
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.63 E-value=7.1e-16 Score=113.41 Aligned_cols=91 Identities=25% Similarity=0.385 Sum_probs=81.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Q psy1135 32 LLNVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCYF 111 (124)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~~ 111 (124)
....+.+..+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++. ++..|+.+.....+.|.+|...|++
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~ 199 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKT 199 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHH
Confidence 345677788899999999999999999999999999999999999999999997 6789999998888999999999999
Q ss_pred cchhhhhhhccc
Q psy1135 112 LPMLQLIPFRIY 123 (124)
Q Consensus 112 ~~~~~~~~~~~S 123 (124)
..++..++..+|
T Consensus 200 ~~~~~~~~~~~S 211 (434)
T 4ea3_A 200 VIAIDYYNMFTS 211 (434)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998877766554
No 17
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.63 E-value=4e-16 Score=115.15 Aligned_cols=87 Identities=13% Similarity=0.262 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccch
Q psy1135 35 VYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFVLPITLMVTLVQNWTWGSFLCYFLPM 114 (124)
Q Consensus 35 ~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~~p~~~~~~~~~~w~~g~~~C~~~~~ 114 (124)
...+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+... ..|.+|...|++..+
T Consensus 20 ~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~ 97 (488)
T 3eml_A 20 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIAC 97 (488)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT--TCCEECHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccchHHHHHHH
Confidence 345677899999999999999999999999999999999999999999999999999877643 378889999999999
Q ss_pred hhhhhhccc
Q psy1135 115 LQLIPFRIY 123 (124)
Q Consensus 115 ~~~~~~~~S 123 (124)
+..++.++|
T Consensus 98 ~~~~~~~~s 106 (488)
T 3eml_A 98 FVLVLTQSS 106 (488)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 877776554
No 18
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.62 E-value=9.7e-16 Score=112.81 Aligned_cols=90 Identities=19% Similarity=0.320 Sum_probs=79.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccccccccccccc
Q psy1135 34 NVYVFFIILYGVTILSGVALNIFAIYHIIVERLFRDATCGYFINIALADIIKCMFV-LPITLMVTLVQNWTWGSFLCYFL 112 (124)
Q Consensus 34 ~~~~~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~~~~~~~l~nLa~aDl~~~~~~-~p~~~~~~~~~~w~~g~~~C~~~ 112 (124)
.......+++.+++++|++||+++++++.|+|++|++.|++++|||++|++.+++. +|+.+.....+.|.+|...|++.
T Consensus 32 ~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 111 (448)
T 2z73_A 32 AVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVY 111 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHH
Confidence 45567778999999999999999999999999999999999999999999988775 89988888888999999999999
Q ss_pred chhhhhhhccc
Q psy1135 113 PMLQLIPFRIY 123 (124)
Q Consensus 113 ~~~~~~~~~~S 123 (124)
.++..++..+|
T Consensus 112 ~~~~~~~~~~S 122 (448)
T 2z73_A 112 GFIGGIFGFMS 122 (448)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88777665544
No 19
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=97.52 E-value=4.2e-06 Score=45.93 Aligned_cols=31 Identities=13% Similarity=0.263 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCccC
Q psy1135 38 FFIILYGVTILSGVALNIFAIYHIIVERLFR 68 (124)
Q Consensus 38 ~~~~~~~~~~~~g~~gN~lvi~~i~~~~~l~ 68 (124)
+.+++|++++++|++||++|++++.++|--+
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~~ 60 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGHH 60 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecccc
Confidence 7789999999999999999999888877544
No 20
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=38.36 E-value=34 Score=16.13 Aligned_cols=17 Identities=6% Similarity=0.231 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy1135 38 FFIILYGVTILSGVALN 54 (124)
Q Consensus 38 ~~~~~~~~~~~~g~~gN 54 (124)
...+++..+++.|.+.|
T Consensus 10 ~vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 10 IVVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHccccCC
Confidence 33455666666666654
No 21
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=25.73 E-value=67 Score=15.65 Aligned_cols=13 Identities=15% Similarity=0.112 Sum_probs=6.2
Q ss_pred HHHHHHHhhCccC
Q psy1135 56 FAIYHIIVERLFR 68 (124)
Q Consensus 56 lvi~~i~~~~~l~ 68 (124)
+.++.++|+|+.+
T Consensus 29 ~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 29 LGIGLFMRRRHIV 41 (44)
T ss_dssp HHHHHHHHTTTCC
T ss_pred HHHHHHhhhhHhh
Confidence 3344455555443
No 22
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=25.24 E-value=69 Score=15.63 Aligned_cols=13 Identities=0% Similarity=0.117 Sum_probs=6.3
Q ss_pred HHHHHHHhhCccC
Q psy1135 56 FAIYHIIVERLFR 68 (124)
Q Consensus 56 lvi~~i~~~~~l~ 68 (124)
+..+.++|+|+.+
T Consensus 28 ~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 28 LTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHTTCSS
T ss_pred HHHHHHhhhhhhh
Confidence 3444455555443
Done!