BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11350
(471 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O43172|PRP4_HUMAN U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4
PE=1 SV=2
Length = 522
Score = 286 bits (731), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 193/301 (64%), Gaps = 11/301 (3%)
Query: 100 LFGEEYSLAKAKERLAKAKEHLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCS 159
L+ YSL +A +RL +A+ H IPE TRT++ QEL K L SL+ +CSQ+GD RPISYC
Sbjct: 179 LWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCH 238
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPS---EGAVCSLAS 216
FSP+S+ +ATA WSGLCKLW+VP+C L+ T RGH+ NVGAI FHP + + +LAS
Sbjct: 239 FSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLAS 298
Query: 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTP 271
CA DGSVKLWSLD D P+A++EGH RV+R+ +HPSGRFLGT C+D SWRL
Sbjct: 299 CAADGSVKLWSLDSDEPVADIEGHT-VRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEE 357
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ 331
+ + EGH V I FH G GT D R+WDL G+ ++ EGH K +Y ++F
Sbjct: 358 ILHQEGHS-MGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFS 416
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP-DGYHLATGSEDNAVKI 390
+G +ATG D +VWDLR RC+ + H V V F P G L TG+ DN KI
Sbjct: 417 PNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKI 476
Query: 391 W 391
W
Sbjct: 477 W 477
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 76/118 (64%), Gaps = 9/118 (7%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAAN------KDVDDDQEKYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA KD + N++ TS EI++
Sbjct: 18 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEE 77
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEEYSLAKAKERL 114
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGE A+ +ERL
Sbjct: 78 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGE--GPAERRERL 133
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRF----- 294
+S F P+ + L T CW +L P L L GH V I FHP
Sbjct: 234 ISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNT-NVGAIVFHPKSTVSLDPK 292
Query: 295 ---LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
L +C D S +LW L+ + V EGH V + + G + T D R+WDL
Sbjct: 293 DVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDL 352
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
I+ EGH V+ + F DG TG D ++WDLR R + + L G
Sbjct: 353 EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 412
Query: 412 V 412
+
Sbjct: 413 I 413
>sp|Q3MHE2|PRP4_BOVIN U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4
PE=2 SV=1
Length = 521
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 193/301 (64%), Gaps = 11/301 (3%)
Query: 100 LFGEEYSLAKAKERLAKAKEHLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCS 159
L+ YSL +A +RL +A+ H IPE TRT++ QEL K L SL+ +CSQ+GD RPISYC
Sbjct: 178 LWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCH 237
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPS---EGAVCSLAS 216
FSP+S+ +ATA WSGLCKLW+VP+C L+ T RGH+ NVGAI FHP + + +LAS
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLAS 297
Query: 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTP 271
CA DGSVKLWSLD D P+A++EGH RV+R+ +HPSGRFLGT C+D SWRL
Sbjct: 298 CAADGSVKLWSLDSDEPVADIEGHT-VRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEE 356
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ 331
+ + EGH V I FH G GT D R+WDL G+ ++ EGH K +Y ++F
Sbjct: 357 ILHQEGHS-MGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFS 415
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP-DGYHLATGSEDNAVKI 390
+G +ATG D +VWDLR RC+ + H V V F P G L TG+ DN KI
Sbjct: 416 PNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKI 475
Query: 391 W 391
W
Sbjct: 476 W 476
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 9/118 (7%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGLLGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEEYSLAKAKERL 114
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGE A+ +ERL
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGE--GPAERRERL 132
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 76/181 (41%), Gaps = 14/181 (7%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRF----- 294
+S F P+ + L T CW +L P L L GH V I FHP
Sbjct: 233 ISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNT-NVGAIVFHPKSTVSLDQK 291
Query: 295 ---LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
L +C D S +LW L+ + V EGH V +++ G + T D R+WDL
Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDL 351
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
I+ EGH V+ + F DG TG D ++WDLR R + + L G
Sbjct: 352 EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 411
Query: 412 V 412
+
Sbjct: 412 I 412
>sp|Q9DAW6|PRP4_MOUSE U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4
PE=2 SV=1
Length = 521
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 193/301 (64%), Gaps = 11/301 (3%)
Query: 100 LFGEEYSLAKAKERLAKAKEHLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCS 159
L+ YSL +A +RL +A+ H IPE TRT++ QEL K L SL+ +CSQ+GD RPISYC
Sbjct: 178 LWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCH 237
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPS---EGAVCSLAS 216
FSP+S+ +ATA WSGLCKLW+VP+C L+ T RGH+ NVGAI FHP + + +LAS
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLAS 297
Query: 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTP 271
CA DGSVKLWSLD D P+A++EGH RV+R+ +HPSGRFLGT C+D SWRL
Sbjct: 298 CAADGSVKLWSLDSDEPVADIEGH-TVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEE 356
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ 331
+ + EGH V I FH G GT D R+WDL G+ ++ EGH K +Y ++F
Sbjct: 357 ILHQEGHS-MGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFS 415
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP-DGYHLATGSEDNAVKI 390
+G +ATG D +VWDLR RC+ + H V V F P G L TG+ DN KI
Sbjct: 416 PNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKI 475
Query: 391 W 391
W
Sbjct: 476 W 476
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 9/118 (7%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEEYSLAKAKERL 114
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGE A+ +ERL
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGE--GPAERRERL 132
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRF----- 294
+S F P+ + L T CW +L P L L GH V I FHP
Sbjct: 233 ISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNT-NVGAIVFHPKSTVSLDQK 291
Query: 295 ---LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
L +C D S +LW L+ + V EGH V + + G + T D R+WDL
Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDL 351
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
I+ EGH V+ + F DG TG D ++WDLR R + + L G
Sbjct: 352 EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 411
Query: 412 V 412
+
Sbjct: 412 I 412
>sp|Q5NVD0|PRP4_PONAB U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4
PE=2 SV=1
Length = 521
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/301 (49%), Positives = 192/301 (63%), Gaps = 11/301 (3%)
Query: 100 LFGEEYSLAKAKERLAKAKEHLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCS 159
L+ YSL +A +RL +A+ H IPE TR ++ QEL K L SL+ +CSQ+GD RPISYC
Sbjct: 178 LWIANYSLPRAMKRLEEARLHKEIPETTRASQMQELHKSLRSLNNFCSQIGDDRPISYCH 237
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPS---EGAVCSLAS 216
FSP+S+ +ATA WSGLCKLW+VP+C L+ T RGH+ NVGAI FHP + + +LAS
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLAS 297
Query: 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTP 271
CA DGSVKLWSLD D P+A++EGH RV+R+ +HPSGRFLGT C+D SWRL
Sbjct: 298 CAADGSVKLWSLDSDEPVADIEGH-TVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEE 356
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ 331
+ + EGH V I FH G GT D R+WDL G+ ++ EGH K +Y ++F
Sbjct: 357 ILHQEGHS-MGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFS 415
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP-DGYHLATGSEDNAVKI 390
+G +ATG D +VWDLR RC+ + H V V F P G L TG+ DN KI
Sbjct: 416 PNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKI 475
Query: 391 W 391
W
Sbjct: 476 W 476
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 9/118 (7%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEEYSLAKAKERL 114
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGE A+ +ERL
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGE--GPAERRERL 132
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRF----- 294
+S F P+ + L T CW +L P L L GH V I FHP
Sbjct: 233 ISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNT-NVGAIVFHPKSTVSLDQK 291
Query: 295 ---LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
L +C D S +LW L+ + V EGH V + + G + T D R+WDL
Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDL 351
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
I+ EGH V+ + F DG TG D ++WDLR R + + L G
Sbjct: 352 EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 411
Query: 412 V 412
+
Sbjct: 412 I 412
>sp|O22212|PRP4L_ARATH U4/U6 small nuclear ribonucleoprotein PRP4-like protein
OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1
Length = 554
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 164/301 (54%), Gaps = 54/301 (17%)
Query: 104 EYSLAKAKERLAKAKEHLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPD 163
++S+ +A R+ +AK P+ A + KH +++ CS GD RP++ CSFS D
Sbjct: 207 KFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGCSFSRD 266
Query: 164 SQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223
G I LA+C+ G
Sbjct: 267 ----------------------------------GKI-------------LATCSLSGVT 279
Query: 224 KLWSLDKDT-PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD-TPLANLEGH 278
KLW + + T +A L+ H+ R + + F P L T D + W+ D T L EGH
Sbjct: 280 KLWEMPQVTNTIAVLKDHKE-RATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGH 338
Query: 279 EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVA 338
R++R+ FHPSG++LGT +D +WRLWD+N G E+L QEGH + VY ++FQ DG++ A
Sbjct: 339 LD-RLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAA 397
Query: 339 TGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ GLD+ RVWDLRTGR I+ +GH+K VFSV+FSP+GYHLA+G EDN +IWDLR R+
Sbjct: 398 SCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKS 457
Query: 399 L 399
L
Sbjct: 458 L 458
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC227.12 PE=4 SV=1
Length = 462
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 159/298 (53%), Gaps = 43/298 (14%)
Query: 105 YSLAKAKERLAKAKEHLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDS 164
YSL KAK RL K +E IP + +HL + SQ+G RPI+ FS +
Sbjct: 125 YSLEKAKLRLKKEREISEIPVPEIVLSGKSSIEHLQKAELMGSQIGGERPIAIVRFSNNG 184
Query: 165 QHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPL----PSEGAVCSLASCAQD 220
H A+ SW G K+W VQ FRGH V ++++PL ++ +LA+ A D
Sbjct: 185 NHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAAD 244
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEP 280
+V LW + TPL LEGH RV R+ FHPSG +L + +D +W
Sbjct: 245 NTVCLWKASQSTPLLRLEGHLA-RVGRVAFHPSGDYLVSASFDTTW-------------- 289
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATG 340
RLWD++ G E+L QEGH + ++ ++ Q DGS+V++G
Sbjct: 290 ------------------------RLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSG 325
Query: 341 GLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
G DA GR+WDLR+G+ IM L+ H++ + ++ +SP+GY LAT S D+ VKIWDLRK L
Sbjct: 326 GNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSL 383
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 141 SLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAI 200
++ + S V D R I S ++ +AT+ + G KLW C L+++ GH+ V ++
Sbjct: 386 TIPAHSSLVSDVRYIE----SGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMSV 441
Query: 201 EFHPLPSEGAVCSLASCAQDGSVKLW 226
+G S D ++KLW
Sbjct: 442 -------DGYGDRFISSGYDRTIKLW 460
>sp|P20053|PRP4_YEAST U4/U6 small nuclear ribonucleoprotein PRP4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PRP4 PE=1
SV=1
Length = 465
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 164/296 (55%), Gaps = 45/296 (15%)
Query: 105 YSLAKAKERLAKAKEHLHIPEATRT---ARNQELQKHLTSLSIYCSQVGDTRPISYCSFS 161
YSL ++++RL K E H TR +R ELQ+ + +L + SQ+ T+PIS S S
Sbjct: 127 YSLERSRKRLQKEMER-HQKFNTRQELLSRRTELQR-MANLELAGSQLVSTKPISAVSLS 184
Query: 162 PDSQHVATASWSGLCKLWTVPECE-LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
D VAT SW+G ++ + L Q H +GAI++HP + + SCA+D
Sbjct: 185 TDDMVVATGSWAGDLQVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNN----QMISCAED 240
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEP 280
G L K+ +N EG R LG +L GHE
Sbjct: 241 G------LIKNFQYSNEEG-------------GLRLLG---------------DLVGHER 266
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATG 340
R+S +K+HPSG+F+G+ D +WRLWD + QE+L QEGH K V+ +SFQ DGS+V +G
Sbjct: 267 -RISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSG 325
Query: 341 GLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
G+D+ +WD+R+G +M L GH K +++V +SP+GY +ATG D + +WD+RKR
Sbjct: 326 GMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRKR 381
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 136/260 (52%), Gaps = 12/260 (4%)
Query: 146 CSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPL 205
C+ G T ++ F+PD +A+ S +LW + + + TF+GH V ++ F+P
Sbjct: 1236 CTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNP- 1294
Query: 206 PSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
+G++ LAS + D +V+LW + L +GH + VS + F P G L + D +
Sbjct: 1295 --DGSM--LASGSGDQTVRLWEISSSKCLHTFQGHTSW-VSSVTFSPDGTMLASGSDDQT 1349
Query: 266 WRL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
RL L GH + V + F P G L + D + RLW ++ G+ + +G
Sbjct: 1350 VRLWSISSGECLYTFLGHTNW-VGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQG 1408
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H V + F DG+++A+G D R+W++ +G C+ L GH+ SV SV FS DG LA
Sbjct: 1409 HNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILA 1468
Query: 381 TGSEDNAVKIWDLRKRRLLK 400
+GS+D +K+WD++ +K
Sbjct: 1469 SGSDDETIKLWDVKTGECIK 1488
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 141 SLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAI 200
+ S++ +G ++ FSPD + AT G+ + W + + T +GH+ V ++
Sbjct: 856 AYSVFTKILGSVLTVA---FSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSV 912
Query: 201 EFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTC 260
F +G + LAS + D +V+LW + L +GH RV + F P+ L +
Sbjct: 913 GF---SQDGKM--LASGSDDQTVRLWDISSGQCLKTFKGHTS-RVRSVVFSPNSLMLASG 966
Query: 261 CWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV 315
D + RL L +GH + V + F+ G L T D + RLWD++ Q
Sbjct: 967 SSDQTVRLWDISSGECLYIFQGHTGW-VYSVAFNLDGSMLATGSGDQTVRLWDISSSQCF 1025
Query: 316 LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD 375
+GH V + F DG+++A+G D R+WD+ +G C+ L+GH V SV FSPD
Sbjct: 1026 YIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPD 1085
Query: 376 GYHLATGSEDNAVKIWDL 393
G LA+G +D V++WD+
Sbjct: 1086 GAMLASGGDDQIVRLWDI 1103
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 12/255 (4%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + FSPD +A+ + +LW + + T +G+ V + F P
Sbjct: 1072 GHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSP----- 1126
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
+LA+ + D V+LW + L L+GH + V+ + F P G L + D + RL
Sbjct: 1127 NGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNW-VNAVAFSPDGATLASGSGDQTVRLW 1185
Query: 269 ----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
L L+GH + V+ + F+P G L + D + RLW++N + + +GH
Sbjct: 1186 DISSSKCLYILQGHTSW-VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSW 1244
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
V + F DGS++A+G D R+WD+ + +C+ +GH V SV F+PDG LA+GS
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSG 1304
Query: 385 DNAVKIWDLRKRRLL 399
D V++W++ + L
Sbjct: 1305 DQTVRLWEISSSKCL 1319
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 125/250 (50%), Gaps = 12/250 (4%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
++ FS D + +A+ S +LW + + ++TF+GH V ++ F P L
Sbjct: 909 VNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSP-----NSLML 963
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLA 273
AS + D +V+LW + L +GH + V + F+ G L T D + RL D +
Sbjct: 964 ASGSSDQTVRLWDISSGECLYIFQGHTGW-VYSVAFNLDGSMLATGSGDQTVRLWDISSS 1022
Query: 274 N----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
+GH V + F G L + D + RLWD++ G + +GH V +
Sbjct: 1023 QCFYIFQGHTSC-VRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVV 1081
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
F DG+++A+GG D R+WD+ +G C+ L+G+ V + FSP+G LA GS D V+
Sbjct: 1082 FSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVR 1141
Query: 390 IWDLRKRRLL 399
+WD+ ++ L
Sbjct: 1142 LWDISSKKCL 1151
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 12/255 (4%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + FS D +A+ S +LW + + T +GH V ++ F P +G
Sbjct: 1030 GHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSP---DG 1086
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
A+ LAS D V+LW + L L+G+ + V + F P+G L D RL
Sbjct: 1087 AM--LASGGDDQIVRLWDISSGNCLYTLQGYTSW-VRFLVFSPNGVTLANGSSDQIVRLW 1143
Query: 269 ----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
L L+GH + V+ + F P G L + D + RLWD++ + + +GH
Sbjct: 1144 DISSKKCLYTLQGHTNW-VNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSW 1202
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
V + F DGS +A+G D R+W++ + +C+ +GH V SV F+PDG LA+GS
Sbjct: 1203 VNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSS 1262
Query: 385 DNAVKIWDLRKRRLL 399
D V++WD+ + L
Sbjct: 1263 DKTVRLWDISSSKCL 1277
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 129/276 (46%), Gaps = 19/276 (6%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + FSP+S +A+ S +LW + E + F+GH V ++ F+ +G
Sbjct: 946 GHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNL---DG 1002
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
++ LA+ + D +V+LW + +GH V + F G L + D + RL
Sbjct: 1003 SM--LATGSGDQTVRLWDISSSQCFYIFQGHTSC-VRSVVFSSDGAMLASGSDDQTVRLW 1059
Query: 269 ----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
L L+GH V + F P G L + D RLWD++ G + +G+
Sbjct: 1060 DISSGNCLYTLQGHTSC-VRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSW 1118
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
V + F +G +A G D R+WD+ + +C+ L+GH V +V FSPDG LA+GS
Sbjct: 1119 VRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSG 1178
Query: 385 DNAVKIWDLRKRRLL-------KWCTQLLPNSIGVT 413
D V++WD+ + L W ++ N G T
Sbjct: 1179 DQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGST 1214
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
V ++F DG + ATG R W+ TG+ ++ +GH V SV FS DG LA+GS+
Sbjct: 867 VLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSD 926
Query: 385 DNAVKIWDLRKRRLLK 400
D V++WD+ + LK
Sbjct: 927 DQTVRLWDISSGQCLK 942
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Query: 355 RCIMFLEGHLK---------SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402
RC+ F E +L SV +V FSPDG ATG V+ W+ + L C
Sbjct: 846 RCVNFTEANLAYSVFTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTC 902
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 138/292 (47%), Gaps = 20/292 (6%)
Query: 124 PEATRTARNQE--LQKHLTSLSIYCSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLW 179
P+ R A + K + S C+Q G + +FSPD Q VA+ S K+W
Sbjct: 935 PDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIW 994
Query: 180 TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEG 239
QT GH +V ++ F P +G +AS + D ++K+W T LEG
Sbjct: 995 DTASGTCTQTLEGHGGSVWSVAFSP---DGQ--RVASGSDDKTIKIWDTASGTCTQTLEG 1049
Query: 240 HEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRF 294
H + V + F P G+ + + DH+ ++ T LEGH V + F P G+
Sbjct: 1050 HGGW-VQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGD-SVWSVAFSPDGQR 1107
Query: 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
+ + D + ++WD G EGHG V+ ++F DG VA+G +D ++WD +G
Sbjct: 1108 VASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASG 1167
Query: 355 RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLL 406
C LEGH V SV FSPDG +A+GS D +KIWD CTQ L
Sbjct: 1168 TCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGT----CTQTL 1215
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 130/268 (48%), Gaps = 18/268 (6%)
Query: 146 CSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203
C+Q G + +FSPD Q VA+ S K+W QT GH +V ++ F
Sbjct: 917 CTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFS 976
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
P +G +AS + D ++K+W T LEGH V + F P G+ + + D
Sbjct: 977 P---DGQ--RVASGSGDKTIKIWDTASGTCTQTLEGHGG-SVWSVAFSPDGQRVASGSDD 1030
Query: 264 HSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
+ ++ T LEGH + V + F P G+ + + DH+ ++WD G
Sbjct: 1031 KTIKIWDTASGTCTQTLEGHGGW-VQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTL 1089
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
EGHG V+ ++F DG VA+G +D ++WD +G C LEGH V SV FSPDG
Sbjct: 1090 EGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQR 1149
Query: 379 LATGSEDNAVKIWDLRKRRLLKWCTQLL 406
+A+GS D +KIWD CTQ L
Sbjct: 1150 VASGSIDGTIKIWDAASGT----CTQTL 1173
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 155/348 (44%), Gaps = 39/348 (11%)
Query: 74 KARHVNVSTDDNQVKLNLRQLGE--PICLFGEEYSLAKAKERLAK--AKEH------LHI 123
+ R + + D + L+ R + E P+ + A + K KE + +
Sbjct: 766 RGRLIAIVRDGYRFALSYRMIIEKAPLQAYTSALVFAPTDSMIKKIFKKEEPGWISTISV 825
Query: 124 PEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE 183
EA A Q L+ H +S + +FS D Q VA+ S K+W
Sbjct: 826 VEAEWNACTQTLEGHGSS-------------VLSVAFSADGQRVASGSDDKTIKIWDTAS 872
Query: 184 CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPF 243
QT GH +V ++ F P +AS + D ++K+W T LEGH
Sbjct: 873 GTGTQTLEGHGGSVWSVAFSPDRER-----VASGSDDKTIKIWDAASGTCTQTLEGHGG- 926
Query: 244 RVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTC 298
RV + F P G+ + + DH+ ++ T LEGH +S + F P G+ + +
Sbjct: 927 RVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLS-VAFSPDGQRVASG 985
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
D + ++WD G EGHG V+ ++F DG VA+G D ++WD +G C
Sbjct: 986 SGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQ 1045
Query: 359 FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLL 406
LEGH V SV FSPDG +A+GS+D+ +KIWD CTQ L
Sbjct: 1046 TLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGT----CTQTL 1089
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 145/310 (46%), Gaps = 24/310 (7%)
Query: 146 CSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203
C+Q G + +FSPD Q VA+ S K+W QT GH V ++ F
Sbjct: 1001 CTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFS 1060
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
P +G +AS + D ++K+W T LEGH V + F P G+ + + D
Sbjct: 1061 P---DGQ--RVASGSDDHTIKIWDAVSGTCTQTLEGHGD-SVWSVAFSPDGQRVASGSID 1114
Query: 264 HSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
+ ++ T LEGH + V + F P G+ + + D + ++WD G
Sbjct: 1115 GTIKIWDAASGTCTQTLEGHGGW-VHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTL 1173
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
EGHG V ++F DG VA+G D ++WD +G C LEGH V SV FSPDG
Sbjct: 1174 EGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQR 1233
Query: 379 LATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLES-LNPGIGNI-IS 436
+A+GS DN +KIWD CTQ L V S T L D + +N IG I I+
Sbjct: 1234 VASGSSDNTIKIWDTASGT----CTQTL----NVGSTATCLSFDYTNAYINTNIGRIQIA 1285
Query: 437 SALKEQVEPI 446
+A E + +
Sbjct: 1286 TATMESLNQL 1295
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 122/253 (48%), Gaps = 16/253 (6%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSPD + VA+ S K+W QT GH V ++ F P +G +AS +
Sbjct: 890 AFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSP---DGQ--RVASGS 944
Query: 219 QDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLA 273
D ++K+W T LEGH +S + F P G+ + + D + ++ T
Sbjct: 945 DDHTIKIWDAASGTCTQTLEGHGSSVLS-VAFSPDGQRVASGSGDKTIKIWDTASGTCTQ 1003
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
LEGH V + F P G+ + + D + ++WD G EGHG V + F D
Sbjct: 1004 TLEGHGG-SVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPD 1062
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G VA+G D ++WD +G C LEGH SV+SV FSPDG +A+GS D +KIWD
Sbjct: 1063 GQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDA 1122
Query: 394 RKRRLLKWCTQLL 406
CTQ L
Sbjct: 1123 ASGT----CTQTL 1131
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 150/306 (49%), Gaps = 31/306 (10%)
Query: 137 KHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN 196
K+++SL G T I +FSPDSQ +A+AS +LW + + Q H
Sbjct: 969 KYISSLE------GHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDW 1022
Query: 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF 256
V A+ FHP +G + +A+ + D +VKLW++ L L H ++ + + P G+
Sbjct: 1023 VYAVVFHP---QGKI--IATGSADCTVKLWNISTGQCLKTLSEHSD-KILGMAWSPDGQL 1076
Query: 257 LGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ 311
L + D S RL + L GH RV F P+G + TC D + ++WD Q
Sbjct: 1077 LASASADQSVRLWDCCTGRCVGILRGHSN-RVYSAIFSPNGEIIATCSTDQTVKIWDWQQ 1135
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
G+ + GH V+ ++F DG ++A+ D R+WD+ TG+C GH V SV
Sbjct: 1136 GKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVA 1195
Query: 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLL--------PNSIGVTSLLTDLYIDV 423
FSPDG +A+GS+D V+IW+++ C Q+L N GVT LT I
Sbjct: 1196 FSPDGEVVASGSQDQTVRIWNVKTGE----CLQILRAKRLYEGMNITGVTG-LTKATIFT 1250
Query: 424 LESLNP 429
L++L
Sbjct: 1251 LQALGA 1256
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 126/247 (51%), Gaps = 12/247 (4%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSP+ Q +AT ++W V +L+ RGH V + F P +G + LASC
Sbjct: 649 AFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSP---DGEI--LASCG 703
Query: 219 QDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLA 273
D +VKLWS+ + L GHE V + FHP G L + D + +L T L
Sbjct: 704 ADENVKLWSVRDGVCIKTLTGHE-HEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQ 762
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
L GH + V + F P G L + DH+ +LWD++QG+ + + H V ++F D
Sbjct: 763 TLTGHTDW-VRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSAD 821
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G +A+G D ++W+ TG C+ GH SV+S+ +SPD L +GS D +K+WD
Sbjct: 822 GQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDC 881
Query: 394 RKRRLLK 400
+ +K
Sbjct: 882 QTHICIK 888
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 130/256 (50%), Gaps = 12/256 (4%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + + + FSPD + +A+ KLW+V + ++T GH+ V ++ FHP +G
Sbjct: 682 GHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHP---DG 738
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
+LAS + D ++KLW + T L L GH + V + F P G L + DH+ +L
Sbjct: 739 E--TLASASGDKTIKLWDIQDGTCLQTLTGHTDW-VRCVAFSPDGNTLASSAADHTIKLW 795
Query: 269 ----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
L L+ H + V + F G+ L + D + ++W+ + G+ + GH
Sbjct: 796 DVSQGKCLRTLKSHTGW-VRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNS 854
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
VY +++ D ++ +G D ++WD +T CI L GH V SV FSPDG LA S
Sbjct: 855 VYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSL 914
Query: 385 DNAVKIWDLRKRRLLK 400
D +V++W+ R + LK
Sbjct: 915 DQSVRLWNCRTGQCLK 930
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
+G T + ++SPDS+ + + S KLW ++T GH V ++ F P
Sbjct: 849 IGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQT 908
Query: 209 GAVCS-------------------------------------LASCAQDGSVKLWSLDKD 231
A S LAS + D +VKLW
Sbjct: 909 LACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTG 968
Query: 232 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFR--------V 283
+++LEGH F + I F P + L + D S R L N+ + F+ V
Sbjct: 969 KYISSLEGHTDF-IYGIAFSPDSQTLASASTDSSVR----LWNISTGQCFQILLEHTDWV 1023
Query: 284 SRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLD 343
+ FHP G+ + T D + +LW+++ GQ + H + M++ DG ++A+ D
Sbjct: 1024 YAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASAD 1083
Query: 344 AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
R+WD TGRC+ L GH V+S FSP+G +AT S D VKIWD ++ + LK
Sbjct: 1084 QSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLK 1140
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FS D Q +A+ S K+W E ++T+ GH +V +I + P L S +
Sbjct: 817 AFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSK-----ILVSGS 871
Query: 219 QDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLA 273
D ++KLW + L GH V + F P G+ L D S RL L
Sbjct: 872 GDRTIKLWDCQTHICIKTLHGHTN-EVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLK 930
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
G+ + + + F P + L + D + +LWD G+ + EGH +Y ++F D
Sbjct: 931 AWYGNTDWALP-VAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPD 989
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+A+ D+ R+W++ TG+C L H V++V F P G +ATGS D VK+W++
Sbjct: 990 SQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNI 1049
Query: 394 RKRRLLK 400
+ LK
Sbjct: 1050 STGQCLK 1056
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
+ +F +G ++AT D RVW++++G+ ++ GH V V FSPDG LA+
Sbjct: 645 ILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGA 704
Query: 385 DNAVKIWDLRKRRLLK 400
D VK+W +R +K
Sbjct: 705 DENVKLWSVRDGVCIK 720
Score = 36.6 bits (83), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402
C +F E L ++ S FSP+G LAT D V++W+++ +LL C
Sbjct: 635 CCVFTE-TLGNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLIC 680
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 134/277 (48%), Gaps = 13/277 (4%)
Query: 121 LHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWT 180
+ +P + A LQ+ L + G + S S D Q +A+ S KLW+
Sbjct: 1041 IAVPNNLKLATVTTLQQALFEMQERNRLEGHKDGVISISISRDGQTIASGSLDKTIKLWS 1100
Query: 181 VPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
+ L +T GH+ V ++ F P +G ++AS D ++KLW T L + GH
Sbjct: 1101 -RDGRLFRTLNGHEDAVYSVSFSP---DGQ--TIASGGSDKTIKLWQTSDGTLLKTITGH 1154
Query: 241 EPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRFL 295
E V+ + F P G+ L + DHS +L DT L L GH ++ ++F P G+ +
Sbjct: 1155 EQ-TVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVIT-VRFSPDGQTI 1212
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
D + +LW G+ + GH V +SF DG +A+ D ++W + G+
Sbjct: 1213 AAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGK 1272
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
+ L+GH SV+ V+FS DG +A+ S DN +K+W+
Sbjct: 1273 LVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWN 1309
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 134/274 (48%), Gaps = 17/274 (6%)
Query: 123 IPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVP 182
I A+R + +H L + G ++ F PDS +A+AS +LW P
Sbjct: 1296 IASASRDNTIKLWNRHGIELETFTGHSGGVYAVN---FLPDSNIIASASLDNTIRLWQRP 1352
Query: 183 ECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP 242
++ G + V A+ F +G++ +A+ DG+++LW + L L G++
Sbjct: 1353 LISPLEVLAG-NSGVYAVSFL---HDGSI--IATAGADGNIQLWHSQDGSLLKTLPGNKA 1406
Query: 243 FRVSRIKFHPSGRFLGTCCWDHS---WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGT 297
+ I F P G + + D + WR+ L L GH+ V+++ F P G+ L +
Sbjct: 1407 --IYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDN-EVNKVNFSPDGKTLAS 1463
Query: 298 CCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI 357
D++ +LW+++ G+ +GH V+ +SF DG ++A+ D R+WD +G I
Sbjct: 1464 ASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLI 1523
Query: 358 MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
L H V+SV+F+PDG LA+ S D VK+W
Sbjct: 1524 KSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLW 1557
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 119/243 (48%), Gaps = 17/243 (6%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
SF D +ATA G +LW + L++T G+ G I F P +G + +AS
Sbjct: 1369 VSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYG-ISFTP---QGDL--IASA 1422
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL----DTPLA 273
D +VK+W + L L GH+ V+++ F P G+ L + D++ +L D
Sbjct: 1423 NADKTVKIWRVRDGKALKTLIGHDN-EVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFK 1481
Query: 274 -NLEGH--EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSF 330
L+GH E F VS F P G+ + + D + RLWD G + H VY ++F
Sbjct: 1482 KTLKGHTDEVFWVS---FSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNF 1538
Query: 331 QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKI 390
DGS++A+ D ++W G + GH V+S FSPDG ++A+ SED VKI
Sbjct: 1539 NPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKI 1598
Query: 391 WDL 393
W +
Sbjct: 1599 WQI 1601
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 117/245 (47%), Gaps = 15/245 (6%)
Query: 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVC 212
+ I SF+P +A+A+ K+W V + + ++T GHD V + F P +G
Sbjct: 1405 KAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSP---DGK-- 1459
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGH--EPFRVSRIKFHPSGRFLGTCCWDHSWRL-D 269
+LAS ++D +VKLW++ L+GH E F VS F P G+ + + D + RL D
Sbjct: 1460 TLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVS---FSPDGKIIASASADKTIRLWD 1516
Query: 270 TPLANLEGHEPFR---VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVY 326
+ NL P V + F+P G L + D + +LW + G + GH VY
Sbjct: 1517 SFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVY 1576
Query: 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
SF DG +A+ D ++W + G + L H V S FSPDG L +GS D
Sbjct: 1577 SSSFSPDGRYIASASEDKTVKIWQI-DGHLLTTLPQHQAGVMSAIFSPDGKTLISGSLDT 1635
Query: 387 AVKIW 391
KIW
Sbjct: 1636 TTKIW 1640
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 160/363 (44%), Gaps = 34/363 (9%)
Query: 49 NVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVK---LNLRQLGEPICLFGEEY 105
++Y+ DE+ D Q + +K + + Q + + L LG FG
Sbjct: 936 DIYIYWTDELGADVQEFIGACLAERKHQQLQAKNRLKQAQRAVVALSVLGIASVSFG--- 992
Query: 106 SLAKAKERLAKAKEHLHIPEATRTARNQELQKHLTS---LSIYCSQVGDTRPISYCSFSP 162
LA + R A+ +E A N Q +L S L+ + + + +++ P
Sbjct: 993 GLAYWQGREAQFRE--------IAALNSSSQANLLSHQQLAALIASLKAAQQVNHVIAVP 1044
Query: 163 DSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGS 222
++ +AT + + E + GH V +I + +G ++AS + D +
Sbjct: 1045 NNLKLATVT----TLQQALFEMQERNRLEGHKDGVISIS---ISRDGQ--TIASGSLDKT 1095
Query: 223 VKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEG 277
+KLWS D L GHE V + F P G+ + + D + +L T L + G
Sbjct: 1096 IKLWSRDGRL-FRTLNGHED-AVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITG 1153
Query: 278 HEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVV 337
HE V+ + F P G+ L + DHS +LWD GQ ++ GH V + F DG +
Sbjct: 1154 HEQ-TVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTI 1212
Query: 338 ATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
A G D ++W + G+ + L GH V S+ FSPDG LA+ S D +K+W + +
Sbjct: 1213 AAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGK 1272
Query: 398 LLK 400
L+K
Sbjct: 1273 LVK 1275
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 14/257 (5%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
G + ++ FSPD +++A+AS KLW +L+ T GH V + F P +
Sbjct: 1152 TGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSP---D 1208
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
G ++A+ ++D +VKLW L L GH+ + V+ + F P G+ L + D +
Sbjct: 1209 GQ--TIAAGSEDKTVKLWHRQDGKLLKTLNGHQDW-VNSLSFSPDGKTLASASADKTIKL 1265
Query: 266 WRL-DTPLA-NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
WR+ D L L+GH V + F G+ + + D++ +LW+ G E+ GH
Sbjct: 1266 WRIADGKLVKTLKGHND-SVWDVNFSSDGKAIASASRDNTIKLWN-RHGIELETFTGHSG 1323
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
VY ++F D +++A+ LD R+W + L G+ V++V F DG +AT
Sbjct: 1324 GVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGN-SGVYAVSFLHDGSIIATAG 1382
Query: 384 EDNAVKIWDLRKRRLLK 400
D +++W + LLK
Sbjct: 1383 ADGNIQLWHSQDGSLLK 1399
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
LEGH+ +S I G+ + + D + +LW + G+ GH VY +SF DG
Sbjct: 1068 LEGHKDGVIS-ISISRDGQTIASGSLDKTIKLWSRD-GRLFRTLNGHEDAVYSVSFSPDG 1125
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+A+GG D ++W G + + GH ++V +V FSPDG +LA+ S D+++K+WD
Sbjct: 1126 QTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTT 1185
Query: 395 KRRLLKWCT 403
+LL T
Sbjct: 1186 SGQLLMTLT 1194
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + + SFSPD +++A+AS K+W + + L+ T H V + F P +G
Sbjct: 1570 GHSNVVYSSSFSPDGRYIASASEDKTVKIWQI-DGHLLTTLPQHQAGVMSAIFSP---DG 1625
Query: 210 AVCSLASCAQDGSVKLWSLD 229
+L S + D + K+W D
Sbjct: 1626 K--TLISGSLDTTTKIWRFD 1643
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 173/382 (45%), Gaps = 37/382 (9%)
Query: 38 DQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEP 97
+ EK+ + T ++ + +D + D AL++E + KA + ++ QVKL +++L E
Sbjct: 18 EYEKHGELKTKSIDL-LDLGPSTDVSALVEEIQ---KAEPLLTASRTEQVKLLIQRLQEK 73
Query: 98 ICLFGEEYSLAKAKERLAKAKEHLHIPEATRTARNQELQKHLTSLSIYCSQVGDT----- 152
+ G+ + ++ KA HI T A N+ +T ++ DT
Sbjct: 74 L---GQNSNHTFYLFKVLKA----HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEE 126
Query: 153 -------RPISYC-SFS-PDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203
R + Y +F+ P +AT S+ CKLW+V + TFRGH + + F+
Sbjct: 127 LNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFN 186
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
P + +A+ + D + KLW + + L GH +S + F+ SG + T +D
Sbjct: 187 PQST-----LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIIS-LSFNTSGDRIITGSFD 240
Query: 264 HS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
H+ W DT + L GH +S F+ + T D + +LWD G+ V
Sbjct: 241 HTVVVWDADTGRKVNILIGHCA-EISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATL 299
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
GH + F G ++AT D R++ T +CI LEGH + + F+P G H
Sbjct: 300 TGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNH 359
Query: 379 LATGSEDNAVKIWDLRKRRLLK 400
L TGS D +IWD + + L+
Sbjct: 360 LLTGSSDKTARIWDAQTGQCLQ 381
>sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf5 PE=1 SV=1
Length = 643
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 17/250 (6%)
Query: 160 FSPDSQHVATASWSGLCKLWTVP--ECELVQTFRGHDCNVGAIEF--HPLPSEGAVCS-- 213
FSPDS +A +LW++ + L ++ D + G++ H P G S
Sbjct: 332 FSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSD-GSVRLLSHSGPVYGTTFSPD 390
Query: 214 ---LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WR 267
L SC++D S +LWS+D T L +GH V + F P G + T D + W
Sbjct: 391 NKYLLSCSEDASARLWSVDTKTALVAYKGHTG-PVWDVAFGPFGHYFATASHDQTAQLWS 449
Query: 268 LD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
D PL GH V + FHP+ ++ T D + RLWD+++G V GH +PV
Sbjct: 450 CDHIYPLRVFAGHLS-DVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPV 508
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
++ DG +A+ + +WD+ TGR I + GH +++S+ FS + L +G D
Sbjct: 509 TAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSD 568
Query: 386 NAVKIWDLRK 395
V+ WD+ K
Sbjct: 569 CTVRAWDVFK 578
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 25/230 (10%)
Query: 189 TFRGHDCNVGAIEFHPLPSEGAVCSLASCA-QDGSVKLWS-------LDKDTPLANLEGH 240
TF + N+ EF P ++ +C Q+ ++LWS L K T + + +G
Sbjct: 319 TFHHTNNNMNCAEFSP------DSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGS 372
Query: 241 EPF-----RVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHP 290
V F P ++L +C D S RL T L +GH V + F P
Sbjct: 373 VRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTG-PVWDVAFGP 431
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G + T D + +LW + + GH V C++F + + V TG D R+WD
Sbjct: 432 FGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWD 491
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ G + GH + V +V +PDG+ +A+ + + +WD+ R +K
Sbjct: 492 VHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIK 541
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 76/202 (37%), Gaps = 44/202 (21%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T P+ +F P + ATAS +LW+ ++ F GH +V + FHP
Sbjct: 419 GHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHP----- 473
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ + + D + +LW + + + GH
Sbjct: 474 NSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHT---------------------------- 505
Query: 270 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
+P V+ + P G + + + LWD+ G+ + GH +Y +S
Sbjct: 506 ---------QP--VTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLS 554
Query: 330 FQGDGSVVATGGLDAFGRVWDL 351
F + +V+ +GG D R WD+
Sbjct: 555 FSRESTVLVSGGSDCTVRAWDV 576
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+P++ + +PD +A+A GL LW + ++T RGH N+ ++ F E
Sbjct: 503 GHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSF---SRES 559
Query: 210 AVCSLASCAQDGSVKLWSLDK 230
V L S D +V+ W + K
Sbjct: 560 TV--LVSGGSDCTVRAWDVFK 578
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 176/414 (42%), Gaps = 53/414 (12%)
Query: 22 EEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVS 81
+E+ K + + DDQEK N T+ D+ + + LLQE++ + + +
Sbjct: 325 DEEFVKEIETELKIKDDQEKQLNQQTAG-----DNYSGANNRTLLQEYKAMNNEKFKDNT 379
Query: 82 -----------------TDDNQVKLNLRQLGEPICLFGEEYSLAKAKERLAKAKEHLHIP 124
++++K++ + + + K L E +
Sbjct: 380 GDDDKDKIKDKIAKDEEKKESELKVDGEKKDSNLSSPARDILPLPPKTALDLKLEIQKVK 439
Query: 125 EATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC 184
E+ + LQ L S+ +Y Q + +S FS D + A K+W++
Sbjct: 440 ESRDAIKLDNLQLALPSVCMYTFQ-NTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDGS 498
Query: 185 ELV-----------------QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227
L +T GH V + F P L S ++D +V+LWS
Sbjct: 499 SLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSP-----DNKYLLSGSEDKTVRLWS 553
Query: 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-----PLANLEGHEPFR 282
+D T L + +GH V + F P G + T D + RL + PL GH
Sbjct: 554 MDTHTALVSYKGHN-HPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLN-D 611
Query: 283 VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGL 342
V + FHP+G ++ T D + R+WD++ G V GH PV ++ DG ++TG
Sbjct: 612 VDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSE 671
Query: 343 DAFGRVWDLRTGRCIMFLEGHLK-SVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
D VWD+ TG+ + + GH K +++S+ +S +G L +G D+ V++WDL+K
Sbjct: 672 DGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKK 725
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
+G T P+ + PD + ++T S G+ +W + + ++ RGH N AI E
Sbjct: 648 LGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKN--AIYSLSYSKE 705
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPF 243
G V L S D +V++W L K T + E EPF
Sbjct: 706 GNV--LISGGADHTVRVWDLKKATTEPSAEPDEPF 738
>sp|Q4R8E7|WDR69_MACFA Outer row dynein assembly protein 16 homolog OS=Macaca fascicularis
GN=WDR69 PE=2 SV=1
Length = 415
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 171/382 (44%), Gaps = 37/382 (9%)
Query: 38 DQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEP 97
+ EK+ + T ++ + +D + D AL++E + KA + ++ QVKL +++L E
Sbjct: 18 EYEKHGELKTKSIDL-LDLGPSTDVSALVEEIQ---KAEPLITASRTEQVKLLIQRLQEK 73
Query: 98 ICLFGEEYSLAKAKERLAKAKEHLHIPEATRTARNQELQKHLTSLSIYCSQVGDT----- 152
+ G+ + ++ KA HI T A N+ +T ++ DT
Sbjct: 74 L---GQHSNHTFYLFKVLKA----HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEE 126
Query: 153 -------RPISYC-SFS-PDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203
R + Y +F+ P AT S+ CKLW+V + TFRGH + + F+
Sbjct: 127 LNTLEGHRNVVYAIAFNNPYGDKTATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFN 186
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
P + +A+ + D + KLW++ + L GH +S + F+ SG + T +D
Sbjct: 187 PQST-----LVATGSMDTTAKLWNIQNGEEVCTLRGHSAEIIS-LSFNTSGDRIITGSFD 240
Query: 264 HS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
H+ W DT + L GH +S F+ + T D + LWD G+ V
Sbjct: 241 HTVVVWDADTGGKVNILIGHCA-EISSALFNWDCSLILTGSMDKTCMLWDATNGKCVATL 299
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
GH + F G ++AT D R++ T +CI LEGH + + F+P G
Sbjct: 300 TGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNR 359
Query: 379 LATGSEDNAVKIWDLRKRRLLK 400
L TGS D +IWD + + L+
Sbjct: 360 LLTGSSDKTARIWDAQTGQCLQ 381
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 171/382 (44%), Gaps = 37/382 (9%)
Query: 38 DQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEP 97
+ EK + T ++ + +D + + D AL++E + KA + ++ +QVKL +++L
Sbjct: 18 EYEKSGQLKTKSIDL-LDLDPSTDVSALVEEIQ---KAEPLITASRSDQVKLLIQRLQNK 73
Query: 98 ICLFGEEYSLAKAKERLAKAKEHLHIPEATRTARNQELQKHLTSLSIYCSQVGDT----- 152
+ G+ + ++ +A HI T A N+ +T ++ DT
Sbjct: 74 L---GQHSNHKFYLFKVLRA----HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEE 126
Query: 153 -------RPISYC-SFS-PDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203
R + Y +F+ P +AT S+ CKLW+V + TFRGH + + F+
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFN 186
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
P + +A+ + D + KLW + + L GH +S + F+ SG + T +D
Sbjct: 187 PQSTL-----VATGSMDTTAKLWDIQSGEEVFTLTGHSAEIIS-LSFNTSGNRIITGSFD 240
Query: 264 HS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
H+ W DT + L GH +S F+ + T D + +LWD G+ V
Sbjct: 241 HTVTVWEADTGRKVYTLIGHCA-EISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATL 299
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
GH + F G ++AT D R++ T C+ LEGH + + F+P G
Sbjct: 300 TGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNR 359
Query: 379 LATGSEDNAVKIWDLRKRRLLK 400
L TGS D +IWD + + L+
Sbjct: 360 LLTGSSDKTARIWDAQTGQCLQ 381
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 119/254 (46%), Gaps = 10/254 (3%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ FSP+ + +ATASW LW++ + GH V +++F P +G
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSP---QG 72
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ LAS ++D +V+LW LD+ + + H V + F G+FL T D S ++
Sbjct: 73 NL--LASASRDKTVRLWVLDRKGKSSEFKAHTA-PVRSVDFSADGQFLVTASEDKSIKVW 129
Query: 270 TPLANLEGHEPFR----VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
+ + +R V KF P GR + +C D + ++WD Q V +
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFA 189
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
+ F +G+ +A+ G D R+WD+R R + + H V + F P G L T S D
Sbjct: 190 NFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSD 249
Query: 386 NAVKIWDLRKRRLL 399
VKI DL + RL+
Sbjct: 250 GTVKILDLVEGRLI 263
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH + + +F P + +A+ + D + LWSL GH+ V
Sbjct: 10 LERYFKGHKAAITSADFSPNCKQ-----IATASWDTFLMLWSLKPHARAYRYVGHKDV-V 63
Query: 246 SRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCW 300
+ ++F P G L + D + W LD + + H V + F G+FL T
Sbjct: 64 TSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTA-PVRSVDFSADGQFLVTASE 122
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D S ++W + + + + H V C F DG ++ + D ++WD + +C+
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNF 182
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ VDFSP+G +A+ D+AV+IWD+R RLL+
Sbjct: 183 SDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQ 222
>sp|D3TLL6|LIS1_GLOMM Lissencephaly-1 homolog OS=Glossina morsitans morsitans PE=2 SV=1
Length = 411
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 33/277 (11%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ F P + +AS + K+W E ++ +GH +V I F S+G
Sbjct: 106 GHRASITRVIFHPTYSLMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAF---DSQG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
+ LASC+ D S+KLW + + + GH+ VS + F P+G ++ + D +
Sbjct: 163 KL--LASCSADLSIKLWDFQQSYDCVKTMLGHD-HNVSSVAFVPAGDYVLSASRDQTIKM 219
Query: 266 WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
W + T + GH + + ++ H G +C DHS R+W +N H
Sbjct: 220 WEVATGYCVKTYSGHREW-IRMVRVHMDGNIFASCSIDHSIRIWSINSRDCKAELRAHDH 278
Query: 324 PVYCMSFQGD--------------------GSVVATGGLDAFGRVWDLRTGRCIMFLEGH 363
V C+++ D G +A+G D RVWD+ G C+ L GH
Sbjct: 279 TVECIAWAPDISTTHINEAAGSDNKKGHHQGPFLASGSRDKTIRVWDVGVGLCLFVLTGH 338
Query: 364 LKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
V + F P G +L + S+D +++WDLR +R +K
Sbjct: 339 DNWVRELTFHPGGKYLVSASDDKTIRVWDLRNKRFMK 375
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 31/270 (11%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC-ELVQTFRGHDCNVGAIEFHPLPSE 208
G T + +F + +A+ S KLW + + V+T GHD NV ++ F P
Sbjct: 148 GHTSSVQDIAFDSQGKLLASCSADLSIKLWDFQQSYDCVKTMLGHDHNVSSVAFVP---- 203
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
A + S ++D ++K+W + + GH + + ++ H G +C DHS
Sbjct: 204 -AGDYVLSASRDQTIKMWEVATGYCVKTYSGHREW-IRMVRVHMDGNIFASCSIDHSIRI 261
Query: 266 WRLDTP--LANLEGH-------------------EPFRVSRIKFHPSGRFLGTCCWDHSW 304
W +++ A L H E K H G FL + D +
Sbjct: 262 WSINSRDCKAELRAHDHTVECIAWAPDISTTHINEAAGSDNKKGHHQGPFLASGSRDKTI 321
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+WD+ G + GH V ++F G + + D RVWDLR R + L H
Sbjct: 322 RVWDVGVGLCLFVLTGHDNWVRELTFHPGGKYLVSASDDKTIRVWDLRNKRFMKTLYAHQ 381
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
SVDF ++ +GS DN VK+W+ R
Sbjct: 382 HFCTSVDFHKKLPYVISGSVDNTVKVWECR 411
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 11/243 (4%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P++ C+F+ T S+ CK+W E V T GH V AI F+ +
Sbjct: 96 PLTNCAFNKSGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKNVVYAIAFNNPYGD----K 151
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT 270
+ + + D + KLW L+GH+ + + F+P + T D++ W ++T
Sbjct: 152 IVTGSFDKTCKLWDAYTGQLYYTLKGHQT-EIVCLSFNPQSTIIATGSMDNTAKLWDVET 210
Query: 271 --PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
A L GH VS + F+ G + T +DH RLWD+ GQ V GH V
Sbjct: 211 GQERATLAGHRAEIVS-LGFNTGGDLIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEVSST 269
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F G++V +G +D R+WD+R+GRC+ +GH V V F G + + S D +
Sbjct: 270 QFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSA 329
Query: 389 KIW 391
+++
Sbjct: 330 RLY 332
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 12/237 (5%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
+P + T S+ CKLW +L T +GH + + F+P + +A+ + D
Sbjct: 146 NPYGDKIVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNPQST-----IIATGSMD 200
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLAN----L 275
+ KLW ++ A L GH VS + F+ G + T +DH RL D L
Sbjct: 201 NTAKLWDVETGQERATLAGHRAEIVS-LGFNTGGDLIVTGSFDHDSRLWDVRTGQCVHVL 259
Query: 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS 335
GH VS +F+ +G + + D + RLWD+ G+ + ++GH V ++F G+
Sbjct: 260 SGHRG-EVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVLDVAFDAAGT 318
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
+ + D R++ TG C L GH + V F+P G L T S D ++WD
Sbjct: 319 KMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVAFNPQGTRLITASSDKTCRLWD 375
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLAN 274
D + K+W+ + LEGH+ + +P G + T +D + +L
Sbjct: 115 DRTCKVWNTFTGEEVFTLEGHKNVVYAIAFNNPYGDKIVTGSFDKTCKLWDAYTGQLYYT 174
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L+GH+ + + F+P + T D++ +LWD+ GQE GH + + F G
Sbjct: 175 LKGHQT-EIVCLSFNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGG 233
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++ TG D R+WD+RTG+C+ L GH V S F+ G + +GS D ++WD+R
Sbjct: 234 DLIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVR 293
Query: 395 KRRLL 399
R L
Sbjct: 294 SGRCL 298
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I F+ + T S+ +LW V + V GH V + +F+
Sbjct: 219 GHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEVSSTQFNY----- 273
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
A + S + D + +LW + L+ +GH V + F +G + + D S RL
Sbjct: 274 AGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTD-EVLDVAFDAAGTKMVSASADGSARLY 332
Query: 270 TPLA-----NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
L L GHE +S++ F+P G L T D + RLWD + G+ + EGH
Sbjct: 333 HTLTGVCQHTLVGHEG-EISKVAFNPQGTRLITASSDKTCRLWDCDTGECLQVLEGHTDE 391
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
++ +F +G + TG D R+W T
Sbjct: 392 IFSCAFNYEGDFIITGSKDNTCRIWKALTA 421
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF-SPDGYH 378
H P+ +F G TG D +VW+ TG + LEGH V+++ F +P G
Sbjct: 92 AHILPLTNCAFNKSGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKNVVYAIAFNNPYGDK 151
Query: 379 LATGSEDNAVKIWD 392
+ TGS D K+WD
Sbjct: 152 IVTGSFDKTCKLWD 165
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
+FSP +A S L +W V + + T GH V A+ F P +GA+ LAS
Sbjct: 465 VAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSP---DGAL--LASG 519
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPL 272
+ D +V+LW + A EGH + V I F P G + + D + RL T
Sbjct: 520 SDDATVRLWDVAAAEERAVFEGHTHY-VLDIAFSPDGSMVASGSRDGTARLWNVATGTEH 578
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
A L+GH + V + F P G + + D + RLWD+ G+E + + V ++F
Sbjct: 579 AVLKGHTDY-VYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSP 637
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
DGS++ G D+ +WD+ +G + EGH V +V FSPDG LA+GS+D +++WD
Sbjct: 638 DGSMLVHGS-DSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWD 696
Query: 393 L 393
+
Sbjct: 697 V 697
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 121/253 (47%), Gaps = 21/253 (8%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + +FSPD +A+ S +LW V E F GH V I F P +G
Sbjct: 499 GHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSP---DG 555
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
++ +AS ++DG+ +LW++ T A L+GH + V + F P G + + D + RL
Sbjct: 556 SM--VASGSRDGTARLWNVATGTEHAVLKGHTDY-VYAVAFSPDGSMVASGSRDGTIRLW 612
Query: 269 --------DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
D A E V + F P G L D + LWD+ G+ + EG
Sbjct: 613 DVATGKERDVLQAPAE-----NVVSLAFSPDGSML-VHGSDSTVHLWDVASGEALHTFEG 666
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H V ++F DG+++A+G D R+WD+ LEGH + V SV F P+G LA
Sbjct: 667 HTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLA 726
Query: 381 TGSEDNAVKIWDL 393
+ SED ++IW +
Sbjct: 727 SASEDGTIRIWPI 739
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
+FSPD VA+ S G +LW V +GH V A+ F P +G++ +AS
Sbjct: 549 IAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSP---DGSM--VASG 603
Query: 218 AQDGSVKLWSL----DKDTPLANLEGHEPFRVSRIKFHPSGRFL--GTCCWDHSWRLDT- 270
++DG+++LW + ++D A E V + F P G L G+ H W + +
Sbjct: 604 SRDGTIRLWDVATGKERDVLQAPAE-----NVVSLAFSPDGSMLVHGSDSTVHLWDVASG 658
Query: 271 -PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L EGH + V + F P G L + D + RLWD+ +E EGH +PV+ ++
Sbjct: 659 EALHTFEGHTDW-VRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVA 717
Query: 330 FQGDGSVVATGGLDAFGRVWDLRT 353
F +G+ +A+ D R+W + T
Sbjct: 718 FHPEGTTLASASEDGTIRIWPIAT 741
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 102/213 (47%), Gaps = 12/213 (5%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
++ RGH V + F S L SC++D S++ W L T +GH + V
Sbjct: 335 MKILRGHCGPVYSTRFLADSS-----GLLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVW 388
Query: 247 RIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301
+ P + + D + RL PL GH V +KFHP+ +L T D
Sbjct: 389 DVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTD 447
Query: 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
+ RLW QG V GH PV +SF +G +A+ G D ++WDL +G L
Sbjct: 448 KTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELR 507
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
GH S+ S+ FSPD +A+ S DN+V++WD+R
Sbjct: 508 GHTDSITSLAFSPDSGLIASASMDNSVRVWDIR 540
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 102/249 (40%), Gaps = 23/249 (9%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ F DS + + S + W + ++GH V ++ P
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFS--- 396
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
AS + D + +LWS D+ PL GH V +KFHP+ +L T D + RL
Sbjct: 397 --LYFASGSHDRTARLWSFDRTYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTDKTVRLW 453
Query: 269 ----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ GH +S + F P+G++L + D +LWDL G GH
Sbjct: 454 SAQQGNSVRLFTGHRGPVLS-LSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDS 512
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLR-----------TGRCIMFLEGHLKSVFSVDFS 373
+ ++F D ++A+ +D RVWD+R +G + G + +V SV F
Sbjct: 513 ITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFM 572
Query: 374 PDGYHLATG 382
L TG
Sbjct: 573 ACNLLLVTG 581
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 232 TPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHS---WRLD--TPLANLEGHEPFRVSR 285
T + L GH P +R SG L +C D S W L T +GH + V
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVWD 389
Query: 286 IKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAF 345
+ P + + D + RLW ++ + GH V C+ F + + +ATG D
Sbjct: 390 VDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 346 GRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQL 405
R+W + G + GH V S+ FSP+G +LA+ ED +K+WDL L K +L
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFK---EL 506
Query: 406 LPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQV 443
++ +TSL + +P G I S+++ V
Sbjct: 507 RGHTDSITSL----------AFSPDSGLIASASMDNSV 534
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 310 NQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFS 369
N G E+ GH PVY F D S + + D R WDL + + +GH V+
Sbjct: 330 NTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWD 389
Query: 370 VDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW---------CTQLLPNSIGVTSLLTD 418
VD SP + A+GS D ++W + L+ C + PNS + + TD
Sbjct: 390 VDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTD 447
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 137/288 (47%), Gaps = 22/288 (7%)
Query: 135 LQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHD 194
L K LT L + V + R FSPDSQ++ TAS G ++W EL R ++
Sbjct: 1413 LGKKLTVLRGHQDAVLNVR------FSPDSQYIVTASKDGTARVWNNTGRELA-VLRHYE 1465
Query: 195 CNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG 254
N+ A EF ++G AS D + +W + + GHE V +F
Sbjct: 1466 KNIFAAEFS---ADGQFIVTAS--DDNTAGIWEI-VGREVGICRGHEG-PVYFAQFSADS 1518
Query: 255 RFLGTCCWDHSWR----LDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN 310
R++ T D++ R L PL L GH+ V + +F P G + T DH+ RLWD
Sbjct: 1519 RYILTASVDNTARIWDFLGRPLLTLAGHQSI-VYQARFSPEGNLIATVSADHTARLWD-R 1576
Query: 311 QGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV 370
G+ V GH V + + DG ++ T D R+WDL +GR ++ LEGH V S
Sbjct: 1577 SGKTVAVLYGHQGLVGTVDWSPDGQMLVTASNDGTARLWDL-SGRELLTLEGHGNWVRSA 1635
Query: 371 DFSPDGYHLATGSEDNAVKIWDLRK-RRLLKWCTQLLPNSIGVTSLLT 417
+FSPDG + T S D K+W ++ +LL Q L N + +L++
Sbjct: 1636 EFSPDGRWVLTSSADGTAKLWPVKTLPQLLSQGGQWLKNYLTHNALVS 1683
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 119/244 (48%), Gaps = 15/244 (6%)
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ 219
FSPD Q + T S +LW V +L RGH V + F P + + ++
Sbjct: 1391 FSPDGQWIVTGSADKTAQLWNVLGKKLT-VLRGHQDAVLNVRFSPDSQ-----YIVTASK 1444
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL-DTPLANL 275
DG+ ++W+ + LA L +E + +F G+F+ T D++ W + +
Sbjct: 1445 DGTARVWN-NTGRELAVLRHYEK-NIFAAEFSADGQFIVTASDDNTAGIWEIVGREVGIC 1502
Query: 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS 335
GHE V +F R++ T D++ R+WD G+ +L GH VY F +G+
Sbjct: 1503 RGHEG-PVYFAQFSADSRYILTASVDNTARIWDF-LGRPLLTLAGHQSIVYQARFSPEGN 1560
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
++AT D R+WD R+G+ + L GH V +VD+SPDG L T S D ++WDL
Sbjct: 1561 LIATVSADHTARLWD-RSGKTVAVLYGHQGLVGTVDWSPDGQMLVTASNDGTARLWDLSG 1619
Query: 396 RRLL 399
R LL
Sbjct: 1620 RELL 1623
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 115/247 (46%), Gaps = 17/247 (6%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ +S D Q+ ATAS KLW E V T RGH+ V ++ F P
Sbjct: 1053 GHQEAITALDWSADGQYFATASADHTVKLWQR-HGEEVATLRGHEDWVRSVHFSPHHQ-- 1109
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
L + QD + ++W+ + L +GH + V +F+ G+ L T D + RL
Sbjct: 1110 ---FLVTSGQDNTARIWNFAGEQ-LTLCQGHADW-VRNAEFNCHGQILLTASRDGTARLW 1164
Query: 269 ---DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDL-NQGQEVLHQEGHGKP 324
+ +GH + V +F P G+++ TC D + RLWDL +Q VL +GH
Sbjct: 1165 DLEGREIGLCQGHTSW-VRNAQFSPDGQWIVTCSADGTARLWDLSSQCFAVL--KGHQNW 1221
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
V + DG + T D RVW R G+C+ L GH ++ FS DG + T S
Sbjct: 1222 VNNALWSPDGQHIITSSSDGTARVWS-RHGKCLGTLRGHDHNIHGARFSLDGQKIVTYST 1280
Query: 385 DNAVKIW 391
DN ++W
Sbjct: 1281 DNTARLW 1287
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 15/253 (5%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + FSPD Q + T S G +LW + + +GH V + P +G
Sbjct: 1176 GHTSWVRNAQFSPDGQWIVTCSADGTARLWDL-SSQCFAVLKGHQNWVNNALWSP---DG 1231
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
+ + + DG+ ++WS L L GH+ + +F G+ + T D++ RL
Sbjct: 1232 Q--HIITSSSDGTARVWSRHGKC-LGTLRGHD-HNIHGARFSLDGQKIVTYSTDNTARLW 1287
Query: 269 ---DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
T L L GH+ V F GRF+ T D + R WD++Q ++ + GH V
Sbjct: 1288 TKEGTLLTILRGHQK-EVYDADFSADGRFVFTVSADQTARQWDISQ-KDTITLTGHSHWV 1345
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
F G + T D R+W G C+ L H V FSPDG + TGS D
Sbjct: 1346 RNAHFNPKGDRLLTVSRDKTARLWTTE-GECVAVLADHQGWVREGQFSPDGQWIVTGSAD 1404
Query: 386 NAVKIWDLRKRRL 398
++W++ ++L
Sbjct: 1405 KTAQLWNVLGKKL 1417
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 266 WRLDTPLAN-LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
W L N L GH+ ++ + + G++ T DH+ +LW G+EV GH
Sbjct: 1041 WSFHGELINVLRGHQE-AITALDWSADGQYFATASADHTVKLWQ-RHGEEVATLRGHEDW 1098
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
V + F + T G D R+W+ G + +GH V + +F+ G L T S
Sbjct: 1099 VRSVHFSPHHQFLVTSGQDNTARIWNF-AGEQLTLCQGHADWVRNAEFNCHGQILLTASR 1157
Query: 385 DNAVKIWDLRKRRL 398
D ++WDL R +
Sbjct: 1158 DGTARLWDLEGREI 1171
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 306 LWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365
LW + G+ + GH + + + + DG AT D ++W R G + L GH
Sbjct: 1040 LWSFH-GELINVLRGHQEAITALDWSADGQYFATASADHTVKLWQ-RHGEEVATLRGHED 1097
Query: 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
V SV FSP L T +DN +IW+ +L
Sbjct: 1098 WVRSVHFSPHHQFLVTSGQDNTARIWNFAGEQL 1130
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 321 HGKPVYCM----SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG 376
H PV + S + +V T + +W G I L GH +++ ++D+S DG
Sbjct: 1009 HEGPVTVLRISPSMENTPPLVLTATTNGIAYLWSFH-GELINVLRGHQEAITALDWSADG 1067
Query: 377 YHLATGSEDNAVKIW 391
+ AT S D+ VK+W
Sbjct: 1068 QYFATASADHTVKLW 1082
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 203 HPLPSEGAVCS-----LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL 257
H P GA S L S ++DG+V+LWSL T L +GH + V +F P G +
Sbjct: 542 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYF 600
Query: 258 GTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG 312
+ D RL PL GH V+ +FHP+ ++ T D + RLWD+ G
Sbjct: 601 VSGGHDRVARLWATDHYQPLRIFAGHLA-DVNCTRFHPNSNYVATGSADRTVRLWDVLNG 659
Query: 313 QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372
V GH P++ ++F +G +ATG D +WD+ G + L+GH +V S+ F
Sbjct: 660 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF 719
Query: 373 SPDGYHLATGSEDNAVKIWDLRK 395
S DG LA+GS DN V++WD K
Sbjct: 720 SRDGEILASGSMDNTVRLWDAIK 742
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + P+ SFSPD ++ ++S G +LW++ + ++GH+ V +F P
Sbjct: 541 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG--- 597
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
S D +LW+ D PL GH V+ +FHP+ ++ T D + RL
Sbjct: 598 --YYFVSGGHDRVARLWATDHYQPLRIFAGHLA-DVNCTRFHPNSNYVATGSADRTVRLW 654
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D N GH+ + + F P+GRFL T D LWD+ G V +GH
Sbjct: 655 DVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT 713
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWD 350
V + F DG ++A+G +D R+WD
Sbjct: 714 VCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+ D E+ GH PVY SF D + + + D R+W L+T C++ +GH
Sbjct: 526 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 585
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW---------CTQLLPNSIGVTSL 415
V+ FSP GY+ +G D ++W + L+ CT+ PNS V +
Sbjct: 586 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATG 645
Query: 416 LTDLYIDVLESLN 428
D + + + LN
Sbjct: 646 SADRTVRLWDVLN 658
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 343 DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
D R+ D +T + L GH V+ FSPD +L + SED V++W L+
Sbjct: 522 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 573
>sp|Q5BK30|WDR69_RAT Outer row dynein assembly protein 16 homolog OS=Rattus norvegicus
GN=Wdr69 PE=2 SV=1
Length = 415
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 111/245 (45%), Gaps = 12/245 (4%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
+P +AT S+ CKLW+ + TFRGH + + F+P + +A+ + D
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQST-----VVATGSMD 198
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT--PLANL 275
+ KLW + + L GH +S + F SG + T +DH+ W T + L
Sbjct: 199 TTAKLWDIQSGEEVVTLTGHLAEIIS-LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTL 257
Query: 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS 335
GH +S F + T D + LWD G+ V GH + F G
Sbjct: 258 IGHCA-EISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK 316
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
++AT D RV++ T +CI LEGH + + F+P G L TGS D +IWD++
Sbjct: 317 LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQT 376
Query: 396 RRLLK 400
+ L+
Sbjct: 377 GQCLQ 381
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 109/251 (43%), Gaps = 11/251 (4%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P++ + + T S+ CK+W E + T GH V AI F+ +
Sbjct: 94 PLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGD----K 149
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL----- 268
+A+ + D + KLWS + GH + + F+P + T D + +L
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTA-EIVCLSFNPQSTVVATGSMDTTAKLWDIQS 208
Query: 269 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+ L GH +S + F SG + T +DH+ +WD + G++V GH +
Sbjct: 209 GEEVVTLTGHLAEIIS-LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSA 267
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F D S++ TG +D +WD +G+C+ L GH + F G +AT S D
Sbjct: 268 LFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTA 327
Query: 389 KIWDLRKRRLL 399
++++ R+ +
Sbjct: 328 RVYNATTRKCI 338
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCC 299
++ + + +G T +D + ++ DT L LEGH + +P G + T
Sbjct: 95 LTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGS 154
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
+D + +LW G+ GH + C+SF +VVATG +D ++WD+++G ++
Sbjct: 155 FDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVT 214
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR---------------LLKW-CT 403
L GHL + S+ F G + TGS D+ V +WD R L W C+
Sbjct: 215 LTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCS 274
Query: 404 QLLPNSIGVTSLLTD 418
+L S+ T +L D
Sbjct: 275 LILTGSMDKTCMLWD 289
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 78/201 (38%), Gaps = 44/201 (21%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
+G IS FS D + T S C LW + V T GHD + F
Sbjct: 258 IGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCF---DYT 314
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G + +A+ + DG+ ++++ + LEGHE +S+I F+P G L
Sbjct: 315 GKL--IATASADGTARVYNATTRKCITKLEGHEG-EISKISFNPQGNRL----------- 360
Query: 269 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L G D + R+WD+ GQ + EGH ++
Sbjct: 361 ------LTGSS---------------------DKTARIWDVQTGQCLQVLEGHTDEIFSC 393
Query: 329 SFQGDGSVVATGGLDAFGRVW 349
+F G++V TG D R+W
Sbjct: 394 AFNYKGNIVITGSKDNSCRIW 414
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF-SPDGYH 378
H P+ ++ GS TG D +VWD +G + LEGH V+++ F +P G
Sbjct: 90 AHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDK 149
Query: 379 LATGSEDNAVKIW 391
+ATGS D K+W
Sbjct: 150 IATGSFDKTCKLW 162
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 12/248 (4%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG ++ FSP +A+AS +LW + F+ H V +++F ++
Sbjct: 57 VGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFS---AD 113
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G + L + ++D S+K+WS+ + L +L H + V KF P GR + +C D + ++
Sbjct: 114 GQL--LVTASEDKSIKVWSMFRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 269 -DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
DT + N F + + F+P+G + + DH+ ++WD+ + + H + H
Sbjct: 171 WDTTNKQCVNNFSDSVGF-ANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSC 229
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V C+SF G+ + T D ++ DL GR I L+GH VF+V FS DG L +G
Sbjct: 230 GVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGG 289
Query: 384 EDNAVKIW 391
D V IW
Sbjct: 290 ADAQVLIW 297
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 10/254 (3%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ FSP+ + +ATASW LW++ + GH V +++F P +G
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSP---QG 72
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ LAS ++D +V+LW LD+ + + H V + F G+ L T D S ++
Sbjct: 73 NL--LASASRDRTVRLWVLDRKGKSSEFKAHTA-PVRSVDFSADGQLLVTASEDKSIKVW 129
Query: 270 TPLANLEGHEPFR----VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
+ + +R V KF P GR + +C D + ++WD Q V +
Sbjct: 130 SMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA 189
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
+ F +G+ +A+ G D ++WD+R + + + H V + F P G L T S D
Sbjct: 190 NFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSD 249
Query: 386 NAVKIWDLRKRRLL 399
VK+ DL + RL+
Sbjct: 250 GTVKMLDLIEGRLI 263
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 12/220 (5%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L ++F+GH + + +F P + +A+ + D + LWSL GH+ V
Sbjct: 10 LERSFKGHKAAITSADFSPNCKQ-----IATASWDTFLMLWSLKPHARAYRYVGHKDV-V 63
Query: 246 SRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCW 300
+ ++F P G L + D + W LD + + H V + F G+ L T
Sbjct: 64 TSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTA-PVRSVDFSADGQLLVTASE 122
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D S ++W + + + + H V C F DG ++ + D ++WD +C+
Sbjct: 123 DKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ VDF+P+G +A+ D+AVKIWD+R +LL+
Sbjct: 183 SDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQ 222
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 236 NLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTPLAN---LEGHEPFRVSRIKFH 289
+ +GH+ ++ F P+ + + T WD W L P A GH+ V+ ++F
Sbjct: 13 SFKGHKA-AITSADFSPNCKQIATASWDTFLMLWSLK-PHARAYRYVGHKDV-VTSLQFS 69
Query: 290 PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
P G L + D + RLW L++ + + H PV + F DG ++ T D +VW
Sbjct: 70 PQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVW 129
Query: 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNS 409
+ R + L H V FSPDG + + SED +KIWD ++ C +S
Sbjct: 130 SMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ----CVNNFSDS 185
Query: 410 IGVTSLLTDLYIDVLESLNPGIGNIISSA 438
+G + ++D NP G I+SA
Sbjct: 186 VGFAN-----FVD----FNPN-GTCIASA 204
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 12/214 (5%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
++ RGH V + F S L SC++D S++ W L T +GH + V
Sbjct: 335 MKILRGHCGPVYSTRFLADSS-----GLLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVW 388
Query: 247 RIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301
+ P + + D + RL PL GH V +KFHP+ +L T D
Sbjct: 389 DLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTD 447
Query: 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
+ RLW QG V GH PV ++F +G +A+ G D ++WDL +G L
Sbjct: 448 KTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR 507
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
GH ++ S+ FSPD +A+ S DN+V++WD+R
Sbjct: 508 GHTDNITSLTFSPDSGLIASASMDNSVRVWDIRN 541
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 23/249 (9%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ F DS + + S + W + ++GH V ++ P
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYS--- 396
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
AS + D + +LWS D+ PL GH V +KFHP+ +L T D + RL
Sbjct: 397 --LYFASGSHDRTARLWSFDRTYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTDKTVRLW 453
Query: 269 ----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ GH +S + F P+G++L + D +LWDL G GH
Sbjct: 454 SAQQGNSVRLFTGHRGPVLS-LAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN 512
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC-----------IMFLEGHLKSVFSVDFS 373
+ ++F D ++A+ +D RVWD+R C + G + +V SV F
Sbjct: 513 ITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFM 572
Query: 374 PDGYHLATG 382
L TG
Sbjct: 573 ACNLLLVTG 581
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 139 LTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTV-----------PECELV 187
L S ++Y G T I+ +FSPDS +A+AS ++W + ELV
Sbjct: 497 LASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELV 556
Query: 188 QTFRGHDCNVGAIEF 202
+ G NV +++F
Sbjct: 557 GVYTGQMSNVLSVQF 571
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 203 HPLPSEGAVCS-----LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL 257
H P GA S L S ++DG+V+LWSL T L +GH + V +F P G +
Sbjct: 543 HSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYF 601
Query: 258 GTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG 312
+ D RL PL GH V+ ++HP+ ++ T D + RLWD+ G
Sbjct: 602 VSGGHDRVARLWATDHYQPLRIFAGHLA-DVNCTRYHPNSNYVATGSADRTVRLWDVLNG 660
Query: 313 QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372
V GH P++ ++F +G +ATG D +WD+ G + L+GH +V S+ F
Sbjct: 661 NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF 720
Query: 373 SPDGYHLATGSEDNAVKIWDLRK 395
S DG LA+GS DN V++WD K
Sbjct: 721 SRDGEILASGSMDNTVRLWDAVK 743
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + P+ SFSPD ++ ++S G +LW++ + ++GH+ V +F P
Sbjct: 542 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG--- 598
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
S D +LW+ D PL GH V+ ++HP+ ++ T D + RL
Sbjct: 599 --YYFVSGGHDRVARLWATDHYQPLRIFAGHLA-DVNCTRYHPNSNYVATGSADRTVRLW 655
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D N GH+ + + F P+GRFL T D LWD+ G V +GH
Sbjct: 656 DVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT 714
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWD 350
V + F DG ++A+G +D R+WD
Sbjct: 715 VCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+ D E+ GH PVY SF D + + + D R+W L+T C++ +GH
Sbjct: 527 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 586
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW---------CTQLLPNSIGVTSL 415
V+ FSP GY+ +G D ++W + L+ CT+ PNS V +
Sbjct: 587 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATG 646
Query: 416 LTDLYIDVLESLN 428
D + + + LN
Sbjct: 647 SADRTVRLWDVLN 659
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 343 DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
D R+ D +T + L GH V+ FSPD +L + SED V++W L+
Sbjct: 523 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQ 574
>sp|P49846|TAF5_DROME Transcription initiation factor TFIID subunit 5 OS=Drosophila
melanogaster GN=Taf5 PE=1 SV=1
Length = 704
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 139/314 (44%), Gaps = 38/314 (12%)
Query: 106 SLAKAKERLAKAKEHLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQ 165
+L +A +RLA +K+ L P A Q + C+++ D + C F S
Sbjct: 350 ALREASKRLALSKDQL--PSAVFYTVLNSHQ------GVTCAEISDDSTMLACGFGDSSV 401
Query: 166 HVATASWSGL-CKLWTVPECELVQTF--RGHDCNV-------GAIEFHPLPSEGAV--CS 213
+ WS KL T+ + + ++ D NV G + + G V C+
Sbjct: 402 RI----WSLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCA 457
Query: 214 LA-------SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 266
A SC++D +++LWSL + + GH + V ++F P G + +C +D +
Sbjct: 458 FAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGH-VYPVWDVRFAPHGYYFVSCSYDKTA 516
Query: 267 RL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
RL + L GH V ++FHP+ ++ T D + RLWD GQ V GH
Sbjct: 517 RLWATDSNQALRVFVGHLS-DVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGH 575
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
V ++F G +A+G +D +WDL G + L H +V ++ FS DG LA
Sbjct: 576 KGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAA 635
Query: 382 GSEDNAVKIWDLRK 395
DN + +WD K
Sbjct: 636 AGLDNNLTLWDFHK 649
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 122/285 (42%), Gaps = 28/285 (9%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
G PI+ F P +AS K+W E T +GH +V + F P
Sbjct: 119 TGHRSPITRVLFHPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDP---S 175
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
G LASC+ D VKLW + L GH+ VS + F PSG FL + D +
Sbjct: 176 GKF--LASCSADMQVKLWDFTIYQCIKTLTGHD-HNVSSVAFLPSGDFLVSASRDKTIKM 232
Query: 266 WRLDTPLAN--LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
W + T GH + + ++ P G L +C DH+ R+W + + + GH
Sbjct: 233 WEVSTGYCTKTFIGHTEW-IRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHEH 291
Query: 324 PVYCMSF-------------QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV 370
V C+++ ++ +G D R WD+ G C+ L GH V +
Sbjct: 292 VVECIAWASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNIGICLFVLIGHDNWVRQL 351
Query: 371 DFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
F P G L + S+D +++WDL+ RR K L +S VTSL
Sbjct: 352 VFHPHGRLLLSASDDKTIRVWDLKNRRCHK---TLNAHSHFVTSL 393
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 114/263 (43%), Gaps = 25/263 (9%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + +F P + +A+ S KLW + ++T GHD NV ++ F LPS
Sbjct: 162 GHTDSVQDVAFDPSGKFLASCSADMQVKLWDFTIYQCIKTLTGHDHNVSSVAF--LPSGD 219
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
L S ++D ++K+W + GH + + ++ P G L +C DH+ R+
Sbjct: 220 F---LVSASRDKTIKMWEVSTGYCTKTFIGHTEW-IRSVRPSPEGNLLASCSNDHTIRIW 275
Query: 270 TPLAN-----LEGHEPFRVSRIKF--HP-----------SGRFLGTCCWDHSWRLWDLNQ 311
+ + L GHE V I + HP S L + D + R WD+N
Sbjct: 276 SVESRECQVVLRGHEHV-VECIAWASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNI 334
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
G + GH V + F G ++ + D RVWDL+ RC L H V S+D
Sbjct: 335 GICLFVLIGHDNWVRQLVFHPHGRLLLSASDDKTIRVWDLKNRRCHKTLNAHSHFVTSLD 394
Query: 372 FSPDGYHLATGSEDNAVKIWDLR 394
+ + TGS D + IWD R
Sbjct: 395 VNRLAPYAITGSVDQTIHIWDCR 417
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 7/165 (4%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLA--NLEGHEPFRVSRIKFHPS 291
L GH ++R+ FHP + D S W +T L+GH V + F PS
Sbjct: 118 LTGHRS-PITRVLFHPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTD-SVQDVAFDPS 175
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G+FL +C D +LWD Q + GH V ++F G + + D ++W++
Sbjct: 176 GKFLASCSADMQVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEV 235
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
TG C GH + + SV SP+G LA+ S D+ ++IW + R
Sbjct: 236 STGYCTKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVESR 280
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 145 YCSQ--VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEF 202
YC++ +G T I SP+ +A+ S ++W+V E RGH+ V I +
Sbjct: 239 YCTKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAW 298
Query: 203 --HP-----LPSE-GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG 254
HP LPS + L S ++D +++ W ++ L L GH+ + V ++ FHP G
Sbjct: 299 ASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNIGICLFVLIGHDNW-VRQLVFHPHG 357
Query: 255 RFLGTCCWDHSWRL 268
R L + D + R+
Sbjct: 358 RLLLSASDDKTIRV 371
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 114/254 (44%), Gaps = 10/254 (3%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ SP+ + +ATASW LW + GH V +++F P G
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSP---HG 72
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ LAS ++D +V+LW DK + + H V + F G+FL T D S ++
Sbjct: 73 NL--LASASRDRTVRLWIPDKRGKFSEFKAHTA-PVRSVDFSADGQFLATASEDKSIKVW 129
Query: 270 TPLANLEGHEPFR----VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
+ + +R V KF P GR + +C D + ++WD Q V +
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA 189
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
+ F G+ +A+ G D +VWD+R + + + H V + F P G +L T S D
Sbjct: 190 NFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSD 249
Query: 386 NAVKIWDLRKRRLL 399
+KI DL + RL+
Sbjct: 250 GTLKILDLLEGRLI 263
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 120/248 (48%), Gaps = 12/248 (4%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG ++ FSP +A+AS +LW + F+ H V +++F ++
Sbjct: 57 VGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFS---AD 113
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G LA+ ++D S+K+WS+ + L +L H + V KF P GR + +C D + ++
Sbjct: 114 GQF--LATASEDKSIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 269 -DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
DT + N F + + F+PSG + + D + ++WD+ + + H + H
Sbjct: 171 WDTTNKQCVNNFSDSVGF-ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG 229
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V C+SF G+ + T D ++ DL GR I L+GH VF+V FS G A+G
Sbjct: 230 GVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGG 289
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 290 ADTQVLLW 297
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 12/220 (5%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH + +++ P + LA+ + D + LW+ GH+ V
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQ-----LATASWDTFLMLWNFKPHARAYRYVGHKDV-V 63
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLGTCCW 300
+ ++F P G L + D + RL P + + H V + F G+FL T
Sbjct: 64 TSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA-PVRSVDFSADGQFLATASE 122
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D S ++W + + + + H V C F DG ++ + D ++WD +C+
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ VDF+P G +A+ D VK+WD+R +LL+
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 222
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDH-----SWRLDTPLANLEGHEPFRVSRIKFHPS 291
+GH+ ++ + P+G+ L T WD +++ GH+ V+ ++F P
Sbjct: 14 FKGHKA-AITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDV-VTSVQFSPH 71
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G L + D + RLW ++ + + H PV + F DG +AT D +VW +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
R + L H V FSPDG + + SED +KIWD ++ C +S+G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ----CVNNFSDSVG 187
Query: 412 VTSLLTDLYIDVLESLNPGIGNIISSALKEQV 443
+ ++D NP G I+SA +Q
Sbjct: 188 FAN-----FVD----FNPS-GTCIASAGSDQT 209
>sp|A2CEH0|POC1B_DANRE POC1 centriolar protein homolog B OS=Danio rerio GN=poc1b PE=2 SV=1
Length = 490
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 147/323 (45%), Gaps = 27/323 (8%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG T I+ +F+P VA++S +LWT F+ H +V ++ F +
Sbjct: 57 VGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHF---SRD 113
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G L + + D SVK+W +++ L +L H + V +F P GR + +C D + RL
Sbjct: 114 GQ--RLVTASDDKSVKVWGVERKKFLYSLNRHTNW-VRCARFSPDGRLIASCGDDRTVRL 170
Query: 269 -DTP-------LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
DT + G F + F+ SG + + D++ ++WD+ + + H +
Sbjct: 171 WDTSSHQCINIFTDYGGSATF----VDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKV 226
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H V C SF G+ + +G D+ ++ DL GR I L GH V +V FS DG A
Sbjct: 227 HNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFA 286
Query: 381 TGSEDNAVKIW-----DLRKRRLL-KWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNI 434
+G D+ V +W L R LL K ++ P+ L D+Y +P G +
Sbjct: 287 SGGADSQVLMWKTNFDSLNYRELLSKHSKRVTPDP---PPHLMDIYPRSHHRHHPQNGTV 343
Query: 435 ISSALKEQVEPIPLLLDIQKLTF 457
+ + + P ++++ ++ F
Sbjct: 344 EINPVADTQSTDPQVVEVGRVVF 366
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 12/250 (4%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
IS F+P+++ +AT S +W + F GH + + F P G++ +
Sbjct: 21 ISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAP---SGSL--V 75
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP 271
AS ++D +V+LW+ + H V + F G+ L T D S W ++
Sbjct: 76 ASSSRDQTVRLWTPSIKGESTVFKAHTA-SVRSVHFSRDGQRLVTASDDKSVKVWGVERK 134
Query: 272 --LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L +L H + V +F P GR + +C D + RLWD + Q + +G +
Sbjct: 135 KFLYSLNRHTNW-VRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVD 193
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
F G+ +A+ G D ++WD+RT + I + H V F P G +L +GS D+ +K
Sbjct: 194 FNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIK 253
Query: 390 IWDLRKRRLL 399
I DL + RL+
Sbjct: 254 ILDLLEGRLI 263
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR-TGRCIMFLEGHLKSVFSVDFSPD 375
H +GH + C F + +ATG D +W+L R F+ GH + V+F+P
Sbjct: 13 HFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFV-GHTDVITGVNFAPS 71
Query: 376 GYHLATGSEDNAVKIW 391
G +A+ S D V++W
Sbjct: 72 GSLVASSSRDQTVRLW 87
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 16/85 (18%)
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR-KRRLLKWCTQLLPNSIGVTSLLTD 418
+GH + DF+P+ LATGS D ++ IW+L K R ++ +G T ++T
Sbjct: 14 FKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRF--------VGHTDVITG 65
Query: 419 LYIDVLESLNPGIGNIISSALKEQV 443
+ + P G++++S+ ++Q
Sbjct: 66 V------NFAPS-GSLVASSSRDQT 83
>sp|Q5FWQ6|WDR69_XENLA Outer row dynein assembly protein 16 homolog OS=Xenopus laevis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 12/237 (5%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
+P +AT S+ CKLW+ + TFRGH + + F+P + +A+ + D
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLVFNPQST-----LIATGSMD 198
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANL 275
+ KLW + L GH +S + F+ +G L T +DH+ W + + + L
Sbjct: 199 TTAKLWDIQSGEEALTLSGHAAEIIS-LSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTL 257
Query: 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS 335
GH +S +F+ + T D S +LWD G+ V GH V ++F G
Sbjct: 258 IGHRG-EISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDVTFDSTGQ 316
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
+VAT D RV+ + +C+ LEGH + + F+ G + T S D ++WD
Sbjct: 317 LVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKTSRLWD 373
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 12/247 (4%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T I F+P S +AT S KLW + E T GH + ++ F+
Sbjct: 175 GHTAEIVCLVFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDR- 233
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
L + + D +V +W + + L GH +S +F+ + T D S +L
Sbjct: 234 ----LITGSFDHTVSVWEIPSGRRIHTLIGHRG-EISSAQFNWDCSLIATASMDKSCKLW 288
Query: 270 TPL-----ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
L A L GH+ V + F +G+ + T D + R++ + + + EGH
Sbjct: 289 DSLNGKCVATLTGHDD-EVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGE 347
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
+ + F G+ + T D R+WD TG C+ L+GH +FS F+ +G + TGS+
Sbjct: 348 ISKICFNAQGNRIVTASSDKTSRLWDPHTGECLQVLKGHTDEIFSCAFNYEGNTIITGSK 407
Query: 385 DNAVKIW 391
DN +IW
Sbjct: 408 DNTCRIW 414
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 11/251 (4%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P++ +F+ T S+ CK+W E + T GH V AI+F+ +
Sbjct: 94 PLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGD----K 149
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL----- 268
+A+ + D + KLWS + GH V + F+P + T D + +L
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLV-FNPQSTLIATGSMDTTAKLWDIQS 208
Query: 269 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L GH +S + F+ +G L T +DH+ +W++ G+ + GH +
Sbjct: 209 GEEALTLSGHAAEIIS-LSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSA 267
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F D S++AT +D ++WD G+C+ L GH V V F G +AT S D
Sbjct: 268 QFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDVTFDSTGQLVATASADGTA 327
Query: 389 KIWDLRKRRLL 399
+++ R+ L
Sbjct: 328 RVYSASSRKCL 338
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 83/201 (41%), Gaps = 44/201 (21%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
+G IS F+ D +ATAS CKLW + V T GHD V + F S
Sbjct: 258 IGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDVTF---DST 314
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G + + AS DG+ +++S LA LEGHE +S+I F+ G
Sbjct: 315 GQLVATASA--DGTARVYSASSRKCLAKLEGHEG-EISKICFNAQG-------------- 357
Query: 269 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+RI S D + RLWD + G+ + +GH ++
Sbjct: 358 ---------------NRIVTASS---------DKTSRLWDPHTGECLQVLKGHTDEIFSC 393
Query: 329 SFQGDGSVVATGGLDAFGRVW 349
+F +G+ + TG D R+W
Sbjct: 394 AFNYEGNTIITGSKDNTCRIW 414
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF-SPDGYH 378
H P+ ++F GS TG D +VWD +G + LEGH V+++ F +P G
Sbjct: 90 AHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDK 149
Query: 379 LATGSEDNAVKIW 391
+ATGS D K+W
Sbjct: 150 IATGSFDKTCKLW 162
>sp|Q291L9|LIS1_DROPS Lissencephaly-1 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=Lis-1 PE=3 SV=1
Length = 411
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 33/280 (11%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G I+ F P + +AS K+W E ++ +GH +V + F
Sbjct: 103 SLTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAF---D 159
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
S+G + LASC+ D S+KLW + + + GH+ VS + F P+G ++ + D +
Sbjct: 160 SQGKL--LASCSADLSIKLWDFQQSYECVKTMHGHD-HNVSSVAFVPAGDYVLSASRDRT 216
Query: 266 ---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W + T + GH + V ++ H G TC DH+ R+W +N +
Sbjct: 217 IKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDHTIRVWLMNSKDCKVELRD 275
Query: 321 HGKPVYCMSFQG--------------------DGSVVATGGLDAFGRVWDLRTGRCIMFL 360
H V C+++ G +A+G D R+WD+ G C++ L
Sbjct: 276 HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTL 335
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
GH V + F P G +L + S+D +++WDLR +R +K
Sbjct: 336 NGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMK 375
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 115/270 (42%), Gaps = 31/270 (11%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC-ELVQTFRGHDCNVGAIEFHPLPSE 208
G T + +F + +A+ S KLW + E V+T GHD NV ++ F P
Sbjct: 148 GHTDSVQDVAFDSQGKLLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVP---- 203
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
A + S ++D ++K+W + + GH + V ++ H G TC DH+
Sbjct: 204 -AGDYVLSASRDRTIKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDHTIRV 261
Query: 266 WRLDTPLANLE--GHE-------------------PFRVSRIKFHPSGRFLGTCCWDHSW 304
W +++ +E HE K H G FL + D +
Sbjct: 262 WLMNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTI 321
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+WD++ G +L GH V ++F G + + D RVWDLR RC+ L H
Sbjct: 322 RIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQ 381
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
S+DF ++ +GS D VK+W+ R
Sbjct: 382 HFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
>sp|B4GAJ1|LIS1_DROPE Lissencephaly-1 homolog OS=Drosophila persimilis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 33/280 (11%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G I+ F P + +AS K+W E ++ +GH +V + F
Sbjct: 103 SLTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAF---D 159
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
S+G + LASC+ D S+KLW + + + GH+ VS + F P+G ++ + D +
Sbjct: 160 SQGKL--LASCSADLSIKLWDFQQSYECVKTMHGHD-HNVSSVAFVPAGDYVLSASRDRT 216
Query: 266 ---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W + T + GH + V ++ H G TC DH+ R+W +N +
Sbjct: 217 IKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDHTIRVWLMNSKDCKVELRD 275
Query: 321 HGKPVYCMSFQG--------------------DGSVVATGGLDAFGRVWDLRTGRCIMFL 360
H V C+++ G +A+G D R+WD+ G C++ L
Sbjct: 276 HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTL 335
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
GH V + F P G +L + S+D +++WDLR +R +K
Sbjct: 336 NGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMK 375
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 115/270 (42%), Gaps = 31/270 (11%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC-ELVQTFRGHDCNVGAIEFHPLPSE 208
G T + +F + +A+ S KLW + E V+T GHD NV ++ F P
Sbjct: 148 GHTDSVQDVAFDSQGKLLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVP---- 203
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
A + S ++D ++K+W + + GH + V ++ H G TC DH+
Sbjct: 204 -AGDYVLSASRDRTIKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDHTIRV 261
Query: 266 WRLDTPLANLE--GHE-------------------PFRVSRIKFHPSGRFLGTCCWDHSW 304
W +++ +E HE K H G FL + D +
Sbjct: 262 WLMNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTI 321
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+WD++ G +L GH V ++F G + + D RVWDLR RC+ L H
Sbjct: 322 RIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQ 381
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
S+DF ++ +GS D VK+W+ R
Sbjct: 382 HFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
>sp|Q5RD06|POC1B_PONAB POC1 centriolar protein homolog B OS=Pongo abelii GN=POC1B PE=2
SV=1
Length = 451
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 10/254 (3%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ SP+ + +ATASW LW + GH V +++F P G
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSP---HG 72
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ LAS ++D +V+LW DK + + H V + F G+FL T D S ++
Sbjct: 73 NL--LASASRDRTVRLWIPDKRGKFSEFKAHTA-PVRSVDFSADGQFLATASEDKSIKVW 129
Query: 270 TPLANLEGHEPFR----VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
+ + +R V KF P GR + +C D + ++WD Q V +
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA 189
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
+ F G+ +A+ G D +VWD+R + + + H V + F P +L T S D
Sbjct: 190 NFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSD 249
Query: 386 NAVKIWDLRKRRLL 399
+KI DL + RL+
Sbjct: 250 GTLKILDLLEGRLI 263
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 12/248 (4%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG ++ FSP +A+AS +LW + F+ H V +++F ++
Sbjct: 57 VGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFS---AD 113
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G LA+ ++D S+K+WS+ + L +L H + V KF P GR + +C D + ++
Sbjct: 114 GQF--LATASEDKSIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 269 -DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
DT + N F + + F+PSG + + D + ++WD+ + + H + H
Sbjct: 171 WDTTNKQCVNNFSDSVGF-ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG 229
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V C+SF + + T D ++ DL GR I L+GH VF+V FS G A+G
Sbjct: 230 GVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGG 289
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 290 ADTQVLLW 297
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 12/220 (5%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH + +++ P + LA+ + D + LW+ GH+ V
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQ-----LATASWDTFLMLWNFKPHARAYRYVGHKDV-V 63
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLGTCCW 300
+ ++F P G L + D + RL P + + H V + F G+FL T
Sbjct: 64 TSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA-PVRSVDFSADGQFLATASE 122
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D S ++W + + + + H V C F DG ++ + D ++WD +C+
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ VDF+P G +A+ D VK+WD+R +LL+
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 222
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDH-----SWRLDTPLANLEGHEPFRVSRIKFHPS 291
+GH+ ++ + P+G+ L T WD +++ GH+ V+ ++F P
Sbjct: 14 FKGHKA-AITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDV-VTSVQFSPH 71
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G L + D + RLW ++ + + H PV + F DG +AT D +VW +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
R + L H V FSPDG + + SED +KIWD ++ C +S+G
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ----CVNNFSDSVG 187
Query: 412 VTSLLTDLYIDVLESLNPGIGNIISSALKEQV 443
+ ++D NP G I+SA +Q
Sbjct: 188 FAN-----FVD----FNPS-GTCIASAGSDQT 209
>sp|O74319|TAF73_SCHPO Transcription initiation factor TFIID subunit taf73
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf73 PE=1 SV=1
Length = 642
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 87/191 (45%), Gaps = 7/191 (3%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL----- 268
+ SC++DG +LWS D + + GH + ++F P G + T D + RL
Sbjct: 418 ILSCSEDGFTRLWSKDTKSTIVKYAGHNA-PIWDVQFSPFGYYFATASHDQTARLWDVEH 476
Query: 269 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
PL GH+ V + FHP+ +L T DH+ R+WD+ G V H PV +
Sbjct: 477 AAPLRVFVGHQN-DVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSAL 535
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
DG +A+ +VWDLR+ + H V+S+ FS D L +G D V
Sbjct: 536 CMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDV 595
Query: 389 KIWDLRKRRLL 399
WDL R L
Sbjct: 596 NFWDLTYRNNL 606
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 70/209 (33%), Gaps = 44/209 (21%)
Query: 143 SIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEF 202
S G PI FSP + ATAS +LW V ++ F GH +V + F
Sbjct: 436 STIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSF 495
Query: 203 HPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW 262
HP LA+ + D + ++W + + H
Sbjct: 496 HP-----NAAYLATGSSDHTTRMWDVRTGGTVRVFNAH---------------------- 528
Query: 263 DHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322
H P VS + G L + ++WDL + + H
Sbjct: 529 ---------------HSP--VSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHS 571
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
VY +SF D ++ +GG D WDL
Sbjct: 572 SIVYSLSFSYDNKILVSGGADTDVNFWDL 600
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 142/303 (46%), Gaps = 22/303 (7%)
Query: 114 LAKAKEHLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWS 173
L KA E L AT + LQ+ L+ ++ G ++ + S +A+AS
Sbjct: 524 LVKADETLSQYPATSPLVS--LQQILSQIAEKNVLTGHRDGVTSVAISSHKNLIASASRD 581
Query: 174 GLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP 233
G LWT P+ E ++ F GH ++ ++F P G + A+ QD +VK+W LD +
Sbjct: 582 GTVHLWT-PQGEFLREFTGHTGSIYRVDFSP---NGKI--FATAGQDQTVKIWDLDGNL- 634
Query: 234 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-----WRLDTPLANLEGHEPFRVSRIKF 288
L L+GH+ V + F P G L + D + WR LA L GH V +F
Sbjct: 635 LQTLKGHQD-SVYSVSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGGHTK-SVDDAQF 692
Query: 289 HPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK-PVYCMSFQGDGSVVATGGLDAFGR 347
P G+ L + C D RLWDL+ ++ Q G + + +++ +G+++A D R
Sbjct: 693 SPDGQTLVSVCRDGQIRLWDLDG--NLIRQFGLPEVAFFGVNWHPNGNLLAVAADDGTVR 750
Query: 348 VWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLP 407
+W + G L GH + V V F+PDG L + S + +V W + L K+ Q P
Sbjct: 751 LWTPQ-GEIKATLSGHDEFVTRVVFTPDGKQLFSSSSNGSVIHWSTSGKMLKKY--QGYP 807
Query: 408 NSI 410
+I
Sbjct: 808 EAI 810
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 12/251 (4%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
G T I FSP+ + ATA K+W + + L+QT +GH +V ++ F P +
Sbjct: 598 TGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDL-DGNLLQTLKGHQDSVYSVSFSP---D 653
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
G + LAS ++D +V+LW LA L GH V +F P G+ L + C D
Sbjct: 654 GEI--LASTSRDRTVRLWHWRSGKTLAVLGGHTK-SVDDAQFSPDGQTLVSVCRDGQIRL 710
Query: 266 WRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
W LD L G + +HP+G L D + RLW QG+ GH + V
Sbjct: 711 WDLDGNLIRQFGLPEVAFFGVNWHPNGNLLAVAADDGTVRLWT-PQGEIKATLSGHDEFV 769
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
+ F DG + + + W +G+ + +G+ +++F + + +G LA G+E+
Sbjct: 770 TRVVFTPDGKQLFSSSSNGSVIHWS-TSGKMLKKYQGYPEAIFGLALASNGALLAIGAEN 828
Query: 386 NAVKIWDLRKR 396
N VK+WD+ +
Sbjct: 829 NLVKVWDMSPK 839
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF 256
+ ++ HP + LA+ + G++ LW+ D T + ++ H R++++++ P+G++
Sbjct: 1000 IRSVSLHP-----TLPQLAAGDEQGNLTLWNFD-GTLIRSIVAHGD-RLNQLQYSPNGKY 1052
Query: 257 LGTCCWDHS---WRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWD 308
L + + + W ++ L + +P + +I P +++ T D RLWD
Sbjct: 1053 LLSAGREGTAKIWSVEGQLLHTLKSDPLPIDQIAISPDSQWIATAASDGMVRLWD 1107
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 23/217 (10%)
Query: 177 KLWTV-PECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLA 235
+LW + + +L++T+R V ++ P+ ++A G V+LW K+
Sbjct: 913 QLWQLQTKSQLLKTWRTDISRVYDVDLRTTPTS-PQWAIAMATGSGEVQLWQGTKNN--- 968
Query: 236 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFL 295
G++ V P LG +++ EP R + HP+ L
Sbjct: 969 QTSGNQSQGVPIELNDPIVLALGN--------------SIQRKEPIR--SVSLHPTLPQL 1012
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
+ LW+ + G + HG + + + +G + + G + ++W + G+
Sbjct: 1013 AAGDEQGNLTLWNFD-GTLIRSIVAHGDRLNQLQYSPNGKYLLSAGREGTAKIWSVE-GQ 1070
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
+ L+ + + SPD +AT + D V++WD
Sbjct: 1071 LLHTLKSDPLPIDQIAISPDSQWIATAASDGMVRLWD 1107
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 10/149 (6%)
Query: 79 NVSTDDNQVKLNLRQLGEPICL-FGEEYSLAKAKERLAKAKEHLHIPEATRTARNQELQK 137
N T NQ + +L +PI L G + KE + H +P+ L
Sbjct: 967 NNQTSGNQSQGVPIELNDPIVLALGNSI---QRKEPIRSVSLHPTLPQLAAGDEQGNLTL 1023
Query: 138 HLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNV 197
++ S V ++ +SP+ +++ +A G K+W+V E +L+ T + +
Sbjct: 1024 WNFDGTLIRSIVAHGDRLNQLQYSPNGKYLLSAGREGTAKIWSV-EGQLLHTLKSDPLPI 1082
Query: 198 GAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
I P +A+ A DG V+LW
Sbjct: 1083 DQIAISPDSQW-----IATAASDGMVRLW 1106
>sp|Q1LV15|WDR69_DANRE Outer row dynein assembly protein 16 homolog OS=Danio rerio
GN=wdr69 PE=2 SV=2
Length = 415
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 114/247 (46%), Gaps = 12/247 (4%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T I +F+P S VAT S KLW V E V T GH + ++ F+
Sbjct: 175 GHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDR- 233
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
L + + D + LW + + L GH +S ++F+ + T D S ++
Sbjct: 234 ----LVTGSFDHTAILWDVPSGRKVHVLSGHRG-EISCVQFNWDCSLIATASLDKSCKVW 288
Query: 269 ----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
LA L GH V + F+ +G+ + T D + R++ + Q + EGH
Sbjct: 289 DAEGGQCLATLLGHND-EVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGE 347
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
+ + F GS V T +D RVW ++TG C+ LEGH +FS F+ +G + TGS+
Sbjct: 348 ISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSK 407
Query: 385 DNAVKIW 391
DN +IW
Sbjct: 408 DNTCRIW 414
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P++ +F+ T S+ CK+W E + T GH V AI F+ +
Sbjct: 94 PLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGD----K 149
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL----- 268
+A+ + D + KLWS + GH + + F+P + T D + +L
Sbjct: 150 VATGSFDKTCKLWSAETGKCFYTFRGHTA-EIVCLAFNPQSTLVATGSMDTTAKLWDVES 208
Query: 269 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
++ L GH +S + F+ +G L T +DH+ LWD+ G++V GH + C+
Sbjct: 209 GEEVSTLAGHFAEIIS-LCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCV 267
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F D S++AT LD +VWD G+C+ L GH V V F+ G +AT S D
Sbjct: 268 QFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTS 327
Query: 389 KIW 391
+++
Sbjct: 328 RVF 330
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCC 299
++ + F+ SG T +D + ++ DT L LEGH + +P G + T
Sbjct: 95 LTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGS 154
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
+D + +LW G+ GH + C++F ++VATG +D ++WD+ +G +
Sbjct: 155 FDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVST 214
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
L GH + S+ F+ G L TGS D+ +WD+ R
Sbjct: 215 LAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGR 252
>sp|B4LQ21|LIS1_DROVI Lissencephaly-1 homolog OS=Drosophila virilis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 33/280 (11%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G I+ F P + +AS K+W E ++ +GH +V + F
Sbjct: 103 SLTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAF---D 159
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
++G + LASC+ D S+KLW + + + GH+ VS + F P+G ++ + D +
Sbjct: 160 AQGKL--LASCSADLSIKLWDFQQSYECVKTMHGHD-HNVSSVAFVPAGDYVLSASRDRT 216
Query: 266 ---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W + T + GH + V ++ H G TC DH+ R+W N +
Sbjct: 217 IKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDHTIRVWLTNSKDCKVELRD 275
Query: 321 HGKPVYCMSFQG--------------------DGSVVATGGLDAFGRVWDLRTGRCIMFL 360
H V C+++ G +A+G D R+WD+ G+C++ L
Sbjct: 276 HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGQCLLTL 335
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
GH V + F P G +L + S+D +++WDLR +R +K
Sbjct: 336 NGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMK 375
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 113/270 (41%), Gaps = 31/270 (11%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC-ELVQTFRGHDCNVGAIEFHPLPSE 208
G T + +F + +A+ S KLW + E V+T GHD NV ++ F P
Sbjct: 148 GHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVP---- 203
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
A + S ++D ++K+W + + GH + V ++ H G TC DH+ R+
Sbjct: 204 -AGDYVLSASRDRTIKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDHTIRV 261
Query: 269 -----DTPLANLEGHE-------------------PFRVSRIKFHPSGRFLGTCCWDHSW 304
L HE K H G FL + D +
Sbjct: 262 WLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTI 321
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+WD++ GQ +L GH V ++F G + + D RVWDLR RC+ L H
Sbjct: 322 RIWDVSVGQCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQ 381
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
S+DF ++ +GS D VK+W+ R
Sbjct: 382 HFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
>sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1
Length = 314
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 112/245 (45%), Gaps = 16/245 (6%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T P+ +C FSPD A+AS +LW V + ++ +GH +V + F P +
Sbjct: 61 GHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQ- 119
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSW 266
LAS D V LW + L L GH + F P+ L T WD H W
Sbjct: 120 ----LASGGWDKRVMLWDVQSGQMLRLLVGHRD-SIQSSDFSPTVNCLATGSWDSTVHIW 174
Query: 267 --RLDTPLAN---LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
R+ TP + LEGH +S + + SG L + WD + +W ++ +GH
Sbjct: 175 DLRMVTPAVSHQALEGHSA-NISCLCYSASG-LLASGSWDKTIHIWKPTTSSLLIQLKGH 232
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
V ++F D +A+ G +VWD TG+C+ L+G L + F+PDG L +
Sbjct: 233 VTWVKSIAFSPDELWLASAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGKILVS 292
Query: 382 GSEDN 386
G+ D
Sbjct: 293 GAADQ 297
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 117/254 (46%), Gaps = 16/254 (6%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
++ +FSPD Q + T S G W +L+ GH G ++F +G + +
Sbjct: 24 VNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGH---TGPVKFCRFSPDGHLFAS 80
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP 271
ASC D +V+LW + + L L+GH+ V + F P R L + WD W + +
Sbjct: 81 ASC--DCTVRLWDVARAKCLRVLKGHQR-SVETVSFSPDSRQLASGGWDKRVMLWDVQSG 137
Query: 272 --LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ-GQEVLHQ--EGHGKPVY 326
L L GH + F P+ L T WD + +WDL V HQ EGH +
Sbjct: 138 QMLRLLVGHRD-SIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANIS 196
Query: 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
C+ + G ++A+G D +W T ++ L+GH+ V S+ FSPD LA+
Sbjct: 197 CLCYSASG-LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSR 255
Query: 387 AVKIWDLRKRRLLK 400
VK+WD + L+
Sbjct: 256 MVKVWDCNTGKCLE 269
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 239 GHEPFRVSRIKFHPSGRFLGT-----CCWDHSWRLDTPLANLEGHE-PFRVSRIKFHPSG 292
G V+ F P G+ L T C + R L L GH P + R F P G
Sbjct: 18 GQHGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCR--FSPDG 75
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
+ D + RLWD+ + + + +GH + V +SF D +A+GG D +WD++
Sbjct: 76 HLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQ 135
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+G+ + L GH S+ S DFSP LATGS D+ V IWDLR
Sbjct: 136 SGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLR 177
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%)
Query: 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSV 336
G V+ F P G+ L T D W+ GQ + GH PV F DG +
Sbjct: 18 GQHGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHL 77
Query: 337 VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
A+ D R+WD+ +C+ L+GH +SV +V FSPD LA+G D V +WD++
Sbjct: 78 FASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSG 137
Query: 397 RLLK 400
++L+
Sbjct: 138 QMLR 141
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 355 RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
R + F H V S FSPDG L TGSED V W+ R +LL
Sbjct: 12 RRVKFFGQHGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLL 56
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 66/198 (33%), Gaps = 48/198 (24%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLW---TVPECELVQTFRGHDCNVGAIEFHPL 205
VG I FSP +AT SW +W V Q GH N+ + +
Sbjct: 144 VGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCY--- 200
Query: 206 PSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
A LAS + D ++ +W + L L+GH +
Sbjct: 201 ---SASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTW---------------------- 235
Query: 266 WRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
V I F P +L + + ++WD N G+ + +G
Sbjct: 236 -----------------VKSIAFSPDELWLASAGYSRMVKVWDCNTGKCLETLKGVLDVA 278
Query: 326 YCMSFQGDGSVVATGGLD 343
+ +F DG ++ +G D
Sbjct: 279 HTCAFTPDGKILVSGAAD 296
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 11/218 (5%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
+Q H NV ++ S G + LA+ +D V +W++ K + +L GH V
Sbjct: 13 LQEIVAHSSNVSSLVLGK--SSGRL--LATGGEDCRVNIWAVSKPNCIMSLTGHTSA-VG 67
Query: 247 RIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301
I+F+ S + S RL L L GH+ +S + FHP G +L + D
Sbjct: 68 CIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHK-ASISSLDFHPMGEYLASGSVD 126
Query: 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
+ +LWD+ + V +GH + V C++F DG +A+ D+ ++WDL G+ I
Sbjct: 127 SNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFT 186
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
H +V V F P+ Y LA+GS D VK+WDL K ++
Sbjct: 187 SHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMI 224
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 13/219 (5%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
+W V + + + GH VG I+F+ SL+ GS++LW L+ L L
Sbjct: 47 IWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLS-----GSLRLWDLEAAKILRTL 101
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSG 292
GH+ +S + FHP G +L + D + +L + +GH V + F P G
Sbjct: 102 MGHK-ASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQA-VRCLAFSPDG 159
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
++L + D + +LWDL G+ + H V + F + ++A+G D ++WDL
Sbjct: 160 KWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLE 219
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
I EG V SV F+PDG L +GSE N ++++
Sbjct: 220 KFNMIGSSEGETGVVRSVLFNPDGSCLYSGSE-NTLRVY 257
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T + F+ + V S SG +LW + ++++T GH ++ +++FHP+
Sbjct: 58 SLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMG 117
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 266
LAS + D ++KLW + + + +GH V + F P G++L + D +
Sbjct: 118 EY-----LASGSVDSNIKLWDVRRKGCVFRYKGHTQA-VRCLAFSPDGKWLASASDDSTV 171
Query: 267 RL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
+L + H V+ ++FHP+ L + D + +LWDL + + EG
Sbjct: 172 KLWDLIAGKMITEFTSHTSA-VNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGE 230
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
V + F DGS + +G + RV+ RC
Sbjct: 231 TGVVRSVLFNPDGSCLYSGSENTL-RVYGWEPDRC 264
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 303 SWRLWDLNQGQEVLHQEGHGKPVYCMSF-QGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
SW+L QE++ H V + + G ++ATGG D +W + CIM L
Sbjct: 10 SWKL------QEIV---AHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLT 60
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
GH +V + F+ + GS ++++WDL ++L+
Sbjct: 61 GHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILR 99
>sp|Q17N69|LIS1_AEDAE Lissencephaly-1 homolog OS=Aedes aegypti GN=AAEL000770 PE=3 SV=2
Length = 409
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 128/290 (44%), Gaps = 40/290 (13%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
G ++ F P +A+AS K+W E +T +GH +V + F S
Sbjct: 103 AGHRATVTRVVFHPVFSMMASASEDATIKIWDFETGEYERTLKGHTDSVQDLAF---DSH 159
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-- 265
G + LASC+ D S+KLW + + + GH+ VS + F P+G +L + D +
Sbjct: 160 GKL--LASCSSDLSIKLWDFQQTFECVKTMHGHD-HNVSSVSFVPAGDYLLSASRDKTIK 216
Query: 266 -WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322
W + T + GH + V ++ + G + +C DHS R+W N + H
Sbjct: 217 MWEVATGYCVKTFTGHREW-VRMVRVNVDGSLMASCSNDHSVRVWQTNSKECKAELREHE 275
Query: 323 KPVYCMSFQG--------------------DGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
V C+++ G +A+G D RVWD+ +G C+ L G
Sbjct: 276 NTVECIAWAPESAAAAINEAAGADNKKGAHQGPFLASGSRDKTIRVWDVNSGLCLFTLVG 335
Query: 363 HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK-------WCTQL 405
H V + F P G ++ + S+D ++IWDLR +R +K +CT L
Sbjct: 336 HDNWVRGIVFHPGGKYMLSASDDKTLRIWDLRNKRCMKTLYAHSHFCTSL 385
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 112/270 (41%), Gaps = 31/270 (11%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC-ELVQTFRGHDCNVGAIEFHPLPSE 208
G T + +F + +A+ S KLW + E V+T GHD NV ++ F P
Sbjct: 146 GHTDSVQDLAFDSHGKLLASCSSDLSIKLWDFQQTFECVKTMHGHDHNVSSVSFVP---- 201
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
A L S ++D ++K+W + + GH + V ++ + G + +C DHS
Sbjct: 202 -AGDYLLSASRDKTIKMWEVATGYCVKTFTGHREW-VRMVRVNVDGSLMASCSNDHSVRV 259
Query: 266 WRLDTP--LANLEGHE-------------------PFRVSRIKFHPSGRFLGTCCWDHSW 304
W+ ++ A L HE K G FL + D +
Sbjct: 260 WQTNSKECKAELREHENTVECIAWAPESAAAAINEAAGADNKKGAHQGPFLASGSRDKTI 319
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+WD+N G + GH V + F G + + D R+WDLR RC+ L H
Sbjct: 320 RVWDVNSGLCLFTLVGHDNWVRGIVFHPGGKYMLSASDDKTLRIWDLRNKRCMKTLYAHS 379
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
S+D ++ +GS D VK+W+ R
Sbjct: 380 HFCTSLDMHKSHPYVISGSVDTTVKVWECR 409
>sp|B4JWA1|LIS1_DROGR Lissencephaly-1 homolog OS=Drosophila grimshawi GN=Lis-1 PE=3 SV=1
Length = 411
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 33/280 (11%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G I+ F P + +AS K+W E +T +GH +V + F
Sbjct: 103 SLTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERTLKGHTDSVQDVAF---D 159
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
++G + L SC+ D S+KLW + + + GH+ VS + F P+G ++ + D +
Sbjct: 160 AQGKL--LVSCSADLSIKLWDFQQSYECVKTMHGHD-HNVSSVAFVPAGDYVLSASRDRT 216
Query: 266 ---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W + T + GH + V ++ H G TC DH+ R+W N +
Sbjct: 217 IKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDHTIRVWLTNSKDCKVELRD 275
Query: 321 HGKPVYCMSFQG--------------------DGSVVATGGLDAFGRVWDLRTGRCIMFL 360
H V C+++ G +A+G D R+WD+ G+C++ L
Sbjct: 276 HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGQCLLTL 335
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
GH V + F P G +L + S+D +++WDLR +R +K
Sbjct: 336 NGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMK 375
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 112/270 (41%), Gaps = 31/270 (11%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC-ELVQTFRGHDCNVGAIEFHPLPSE 208
G T + +F + + + S KLW + E V+T GHD NV ++ F P
Sbjct: 148 GHTDSVQDVAFDAQGKLLVSCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVP---- 203
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
A + S ++D ++K+W + + GH + V ++ H G TC DH+ R+
Sbjct: 204 -AGDYVLSASRDRTIKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDHTIRV 261
Query: 269 -----DTPLANLEGHE-------------------PFRVSRIKFHPSGRFLGTCCWDHSW 304
L HE K H G FL + D +
Sbjct: 262 WLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTI 321
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+WD++ GQ +L GH V ++F G + + D RVWDLR RC+ L H
Sbjct: 322 RIWDVSVGQCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQ 381
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
S+DF ++ +GS D VK+W+ R
Sbjct: 382 HFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
>sp|Q6P2Y2|WDR69_XENTR Outer row dynein assembly protein 16 homolog OS=Xenopus tropicalis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 12/237 (5%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
+P +AT S+ CKLW+ + TFRGH + + F+P + +A+ + D
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLAFNPQST-----LIATGSMD 198
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANL 275
+ KLW + L GH +S + F+ +G L T +DH+ W + + + L
Sbjct: 199 TTAKLWDIQSGEEALTLSGHAAEIIS-LSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTL 257
Query: 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS 335
GH +S +F+ + T D S +LWD G+ V GH V ++F G
Sbjct: 258 IGHRG-EISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQ 316
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
+VAT D RV+ + +C+ LEGH + + F+ G + T S D ++W+
Sbjct: 317 LVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRILTASSDKTSRLWN 373
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 12/247 (4%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T I +F+P S +AT S KLW + E T GH + ++ F+
Sbjct: 175 GHTAEIVCLAFNPQSTLIATGSMDTTAKLWDIQSGEEALTLSGHAAEIISLSFNTTGDR- 233
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
L + + D +V +W + + L GH +S +F+ + T D S +L
Sbjct: 234 ----LITGSFDHTVSVWEIPSGRRIHTLIGHRG-EISSAQFNWDCSLIATASMDKSCKLW 288
Query: 270 TPL-----ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
L A L GHE V + F +G+ + T D + R++ + + + EGH
Sbjct: 289 DSLNGKCVATLTGHED-EVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGE 347
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
+ + F G+ + T D R+W+ TG C+ L+GH +FS F+ +G + TGS+
Sbjct: 348 ISKICFNAQGNRILTASSDKTSRLWNPHTGECLQVLKGHTDEIFSCAFNYEGNTIITGSK 407
Query: 385 DNAVKIW 391
DN +IW
Sbjct: 408 DNTCRIW 414
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 11/251 (4%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P++ +F+ T S+ CK+W E + T GH V AI+F+ +
Sbjct: 94 PLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGD----K 149
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL----- 268
+A+ + D + KLWS + GH + + F+P + T D + +L
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTA-EIVCLAFNPQSTLIATGSMDTTAKLWDIQS 208
Query: 269 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L GH +S + F+ +G L T +DH+ +W++ G+ + GH +
Sbjct: 209 GEEALTLSGHAAEIIS-LSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSA 267
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F D S++AT +D ++WD G+C+ L GH V V F G +AT S D
Sbjct: 268 QFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTFDSTGQLVATASADGTA 327
Query: 389 KIWDLRKRRLL 399
+++ R+ L
Sbjct: 328 RVYSASSRKCL 338
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
+G IS F+ D +ATAS CKLW + V T GH+ V + F S
Sbjct: 258 IGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDVTF---DST 314
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G + + AS DG+ +++S LA LEGHE +S+I F+ G + T D + RL
Sbjct: 315 GQLVATASA--DGTARVYSASSRKCLAKLEGHEG-EISKICFNAQGNRILTASSDKTSRL 371
Query: 269 DTP-----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
P L L+GH + F+ G + T D++ R+W
Sbjct: 372 WNPHTGECLQVLKGHTD-EIFSCAFNYEGNTIITGSKDNTCRIW 414
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF-SPDGYH 378
H P+ ++F GS TG D +VWD +G + LEGH V+++ F +P G
Sbjct: 90 AHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDK 149
Query: 379 LATGSEDNAVKIW 391
+ATGS D K+W
Sbjct: 150 IATGSFDKTCKLW 162
>sp|B4KT48|LIS1_DROMO Lissencephaly-1 homolog OS=Drosophila mojavensis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 33/280 (11%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G I+ F P + +AS K+W E ++ +GH +V + F
Sbjct: 103 SLTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAF---D 159
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
++G + LASC+ D S+KLW + + + GH+ VS + F P+G ++ + D +
Sbjct: 160 AQGKL--LASCSADLSIKLWDFQQSYECVKTMHGHD-HNVSSVAFVPAGDYVLSASRDRT 216
Query: 266 ---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W + T + GH + V ++ H G TC DH+ R+W N +
Sbjct: 217 IKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDHTIRVWLTNSKDCKVELRD 275
Query: 321 HGKPVYCMSFQG--------------------DGSVVATGGLDAFGRVWDLRTGRCIMFL 360
H V C+++ G +A+G D R+WD+ G C++ L
Sbjct: 276 HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTL 335
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
GH V + F P G +L + S+D +++WDLR +R +K
Sbjct: 336 NGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMK 375
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 113/270 (41%), Gaps = 31/270 (11%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC-ELVQTFRGHDCNVGAIEFHPLPSE 208
G T + +F + +A+ S KLW + E V+T GHD NV ++ F P
Sbjct: 148 GHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVP---- 203
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
A + S ++D ++K+W + + GH + V ++ H G TC DH+ R+
Sbjct: 204 -AGDYVLSASRDRTIKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDHTIRV 261
Query: 269 -----DTPLANLEGHE-------------------PFRVSRIKFHPSGRFLGTCCWDHSW 304
L HE K H G FL + D +
Sbjct: 262 WLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTI 321
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+WD++ G +L GH V ++F G + + D RVWDLR RC+ L H
Sbjct: 322 RIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQ 381
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
S+DF ++ +GS D +VK+W+ R
Sbjct: 382 HFCTSIDFHKAHPYVISGSVDQSVKVWECR 411
>sp|B3MEY6|LIS1_DROAN Lissencephaly-1 homolog OS=Drosophila ananassae GN=Lis-1 PE=3 SV=1
Length = 411
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 33/280 (11%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G I+ F P V +AS K+W E ++ +GH +V + F
Sbjct: 103 SMSGHRASITRVIFHPIFGLVVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAF---D 159
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
++G + LASC+ D S+KLW + + + GH+ VS + F P+G ++ + D +
Sbjct: 160 AQGKL--LASCSADLSIKLWDFQQTYECVKTMHGHD-HNVSSVAFVPAGDYVLSASRDRT 216
Query: 266 ---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W + T + GH + V ++ H G TC DH+ R+W N +
Sbjct: 217 VKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDHTIRVWLTNSRDCKVELRD 275
Query: 321 HGKPVYCMSFQG--------------------DGSVVATGGLDAFGRVWDLRTGRCIMFL 360
H V C+++ G +A+G D R+WD+ G C+ L
Sbjct: 276 HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLFTL 335
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
GH V + F P G +L + S+D +++WDLR +R +K
Sbjct: 336 NGHDNWVRGLAFHPAGKYLVSASDDKTIRVWDLRNKRCMK 375
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 113/271 (41%), Gaps = 33/271 (12%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC-ELVQTFRGHDCNVGAIEFHPLPSE 208
G T + +F + +A+ S KLW + E V+T GHD NV ++ F P
Sbjct: 148 GHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQTYECVKTMHGHDHNVSSVAFVP---- 203
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
A + S ++D +VK+W + + GH + V ++ H G TC DH+ R+
Sbjct: 204 -AGDYVLSASRDRTVKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDHTIRV 261
Query: 269 ------DTPLANLEGHE-------------------PFRVSRIKFHPSGRFLGTCCWDHS 303
D + L HE K H G FL + D +
Sbjct: 262 WLTNSRDCKV-ELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKT 320
Query: 304 WRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH 363
R+WD++ G + GH V ++F G + + D RVWDLR RC+ L H
Sbjct: 321 IRIWDVSVGLCLFTLNGHDNWVRGLAFHPAGKYLVSASDDKTIRVWDLRNKRCMKTLYAH 380
Query: 364 LKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
S+DF ++ +GS D VK+W+ R
Sbjct: 381 QHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
>sp|F6ZT52|POC1B_XENTR POC1 centriolar protein homolog B OS=Xenopus tropicalis GN=poc1b
PE=2 SV=1
Length = 470
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 119/258 (46%), Gaps = 18/258 (6%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G ++Y FSPD + +A++S +W + GH V ++F P G
Sbjct: 16 GHKDAVTYVDFSPDGKQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTCVQFSP---SG 72
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ +AS ++D +V+LW+ + + L+ H V + F G T D S W
Sbjct: 73 HL--VASSSKDRTVRLWAPNIKGESSVLKAHTAV-VRCVNFSSDGHTFITASDDKSIKAW 129
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG---QEVLHQEGH 321
L L +L H + V +F P GR + +C D + R+WD+ + +GH
Sbjct: 130 NLHRQRFLYSLTEHTNW-VRCARFSPDGRLIASCSDDKTVRIWDITNRLCINTFVDYKGH 188
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
V F G+ VA+ G+D+ +VWD+RT + + + H V S+ F P G +L T
Sbjct: 189 SNYV---DFNPMGTCVASAGVDSTVKVWDIRTNKLLQHYQVHNAGVNSLSFHPSGNYLLT 245
Query: 382 GSEDNAVKIWDLRKRRLL 399
S D VKI DL + RL+
Sbjct: 246 ASNDGTVKILDLLEGRLI 263
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 14/221 (6%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH V ++F P +G LAS + D V +W+ + GH+ V
Sbjct: 10 LQRHFKGHKDAVTYVDFSP---DGK--QLASSSADACVMIWNFKPQSRAYKYPGHKE-AV 63
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFR------VSRIKFHPSGRFLGTCC 299
+ ++F PSG + + D + RL P N++G V + F G T
Sbjct: 64 TCVQFSPSGHLVASSSKDRTVRLWAP--NIKGESSVLKAHTAVVRCVNFSSDGHTFITAS 121
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D S + W+L++ + + H V C F DG ++A+ D R+WD+ CI
Sbjct: 122 DDKSIKAWNLHRQRFLYSLTEHTNWVRCARFSPDGRLIASCSDDKTVRIWDITNRLCINT 181
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ VDF+P G +A+ D+ VK+WD+R +LL+
Sbjct: 182 FVDYKGHSNYVDFNPMGTCVASAGVDSTVKVWDIRTNKLLQ 222
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
+ +GH+ V+ + F P G+ L + D +W+ GH + V C+ F
Sbjct: 13 HFKGHKD-AVTYVDFSPDGKQLASSSADACVMIWNFKPQSRAYKYPGHKEAVTCVQFSPS 71
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G +VA+ D R+W L+ H V V+FS DG+ T S+D ++K W+L
Sbjct: 72 GHLVASSSKDRTVRLWAPNIKGESSVLKAHTAVVRCVNFSSDGHTFITASDDKSIKAWNL 131
Query: 394 RKRRLLKWCTQ 404
++R L T+
Sbjct: 132 HRQRFLYSLTE 142
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 111/223 (49%), Gaps = 12/223 (5%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
+Q H C+V ++ S G + +A+ D V LWS++K + +L GH V
Sbjct: 13 LQEIVAHGCSVSSVVLGR--SSGRL--VATGGDDCRVHLWSVNKPNCIMSLTGHT-TPVE 67
Query: 247 RIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301
++F+ S + S W L+ L L GH+ VS + FHP G F+ + D
Sbjct: 68 SVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHK-ANVSSLDFHPYGEFVASGSLD 126
Query: 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
+ +LWD+ + V +GH + V C+ F DG +A+ D ++WDL G+ + L
Sbjct: 127 TNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELS 186
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQ 404
H V ++F P+ Y LA+GS D V+ WDL K +L+ CT+
Sbjct: 187 EHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVG-CTE 228
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T P+ F+ + + S SG ++W + ++++T GH NV +++FHP
Sbjct: 58 SLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPY- 116
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 266
G +AS + D ++KLW + + + +GH V ++F P G++L + DHS
Sbjct: 117 --GEF--VASGSLDTNIKLWDVRRKGCVFRYKGHT-QAVRCLRFSPDGKWLASASDDHSV 171
Query: 267 RL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
+L +A L H+ V+ I+FHP+ L + D + R WDL + Q V EG
Sbjct: 172 KLWDLTAGKMMAELSEHK-GPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGE 230
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
PV + F DG + GG D+ RV+ +C
Sbjct: 231 TIPVRAILFSNDGGCIFCGGKDSL-RVYGWEPDQC 264
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 12/225 (5%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
VAT LW+V + + + GH V ++ F+ SE + + +Q GS+++W
Sbjct: 36 VATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNN--SEELI---VAGSQSGSLRIW 90
Query: 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPF 281
L+ L L GH+ VS + FHP G F+ + D + +L + +GH
Sbjct: 91 DLEAAKILRTLMGHK-ANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHT-Q 148
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
V ++F P G++L + DHS +LWDL G+ + H PV + F + ++A+G
Sbjct: 149 AVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGS 208
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
D R WDL + + EG V ++ FS DG + G +D+
Sbjct: 209 ADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGGKDS 253
>sp|B3S4I5|LIS1_TRIAD Lissencephaly-1 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_50647
PE=3 SV=1
Length = 409
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 32/276 (11%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G PI+ F P + ++S K+W + +T RGH +V + F S G
Sbjct: 105 GHRSPITCVVFHPVYNVMVSSSEDASMKIWDYESGDFERTLRGHTDSVQDLAF---DSSG 161
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LAS + D +VK+W L GH+ VS + F PSG FL + D + W
Sbjct: 162 KL--LASSSADMTVKIWDFQTFECRMTLRGHD-HNVSSVCFLPSGDFLLSSSRDKTIKMW 218
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + N EGH + V R+ G + +C D + R+W L+ + GH
Sbjct: 219 EVATGYCVYNFEGHREW-VRRVAVASDGSLMASCSNDQTVRIWSLSSKECKEELRGHEHV 277
Query: 325 VYCMSF--------------------QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
V C+ + Q G +A+G D ++WD+ T C+ L GH
Sbjct: 278 VECIKWAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVIKIWDVTTAVCLFSLVGHD 337
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
V + F G +L + S+D +KIW+LR +R K
Sbjct: 338 NWVRGLAFHAGGKYLTSASDDKTIKIWELRHKRCSK 373
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 115/270 (42%), Gaps = 32/270 (11%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + +F + +A++S K+W E T RGHD NV ++ F LPS
Sbjct: 147 GHTDSVQDLAFDSSGKLLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCF--LPSGD 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
L S ++D ++K+W + + N EGH + V R+ G + +C D + W
Sbjct: 205 F---LLSSSRDKTIKMWEVATGYCVYNFEGHREW-VRRVAVASDGSLMASCSNDQTVRIW 260
Query: 267 RLDTPLAN--LEGHEPFRVSRIKFHP--------------------SGRFLGTCCWDHSW 304
L + L GHE V IK+ P SG FL + D
Sbjct: 261 SLSSKECKEELRGHEHV-VECIKWAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVI 319
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
++WD+ + GH V ++F G + + D ++W+LR RC LE H
Sbjct: 320 KIWDVTTAVCLFSLVGHDNWVRGLAFHAGGKYLTSASDDKTIKIWELRHKRCSKSLEAHN 379
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
V ++DF + TGS D +K+W+ R
Sbjct: 380 HFVTTIDFHRSSPFVITGSVDLTIKVWECR 409
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
+L GH ++ + FHP + + D S ++WD G GH V ++F
Sbjct: 102 SLSGHRS-PITCVVFHPVYNVMVSSSEDASMKIWDYESGDFERTLRGHTDSVQDLAFDSS 160
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G ++A+ D ++WD +T C M L GH +V SV F P G L + S D +K+W++
Sbjct: 161 GKLLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGDFLLSSSRDKTIKMWEV 220
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 84/216 (38%), Gaps = 44/216 (20%)
Query: 181 VPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
+P + GH + + FHP+ + + S ++D S+K+W
Sbjct: 94 IPRPPEKHSLSGHRSPITCVVFHPVYN-----VMVSSSEDASMKIWD------------- 135
Query: 241 EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW 300
+ SG F T L GH V + F SG+ L +
Sbjct: 136 ----------YESGDFERT---------------LRGHTD-SVQDLAFDSSGKLLASSSA 169
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D + ++WD + + GH V + F G + + D ++W++ TG C+
Sbjct: 170 DMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGDFLLSSSRDKTIKMWEVATGYCVYNF 229
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
EGH + V V + DG +A+ S D V+IW L +
Sbjct: 230 EGHREWVRRVAVASDGSLMASCSNDQTVRIWSLSSK 265
>sp|Q4P9P9|LIS1_USTMA Nuclear distribution protein PAC1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=PAC1 PE=3 SV=1
Length = 453
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 150/335 (44%), Gaps = 51/335 (15%)
Query: 107 LAKAKERLAKAKEHLHI-PEATRTARNQELQKHL-TSLSIYCSQVGDTRPISYCSFSPDS 164
+ + + R+++ +E L P A R+A L L + S + G P++ SF P
Sbjct: 78 IMEMESRISQLQEELSAAPSAKRSA---SLNDWLPAASSARHTMQGHRLPVTKVSFHPVF 134
Query: 165 QHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224
+A+AS KLW + +T +GH V ++F S+G + SC+ D S+K
Sbjct: 135 SQIASASEDTTVKLWDWETGDFERTLKGHTKAVQDVDFD---SKGNY--VLSCSSDLSIK 189
Query: 225 LWSLDKDTP-LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPL--ANLEGH 278
+W + D + L+GH+ VS ++F P ++ + D + W T L+GH
Sbjct: 190 VWDANNDYKNIKTLQGHD-HSVSSVRFLPGDDYIVSASRDKTIKIWEFSTGFCTKTLQGH 248
Query: 279 EPFRVSRIKFHPS--GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSF------ 330
+ S I PS ++L +C D + R+WD++ G+ + GH V F
Sbjct: 249 AEWVRSAI---PSDDAKWLVSCSTDQTARVWDVSSGETKVELRGHEHVVEVAIFAPVASY 305
Query: 331 -------------------QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
G VATG D R+WD +G+C+ L GH V +
Sbjct: 306 AAIRQLASLDPNASKDASASMAGQFVATGSRDKTIRIWDSISGQCLKTLTGHDNWVRGLA 365
Query: 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLL 406
FSP+G L + S+D +++WDL+ R CT+ +
Sbjct: 366 FSPNGKSLLSVSDDKTMRLWDLQSGR----CTRTI 396
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 86/214 (40%), Gaps = 19/214 (8%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G +S F P ++ +AS K+W +T +GH V + +PS+
Sbjct: 205 GHDHSVSSVRFLPGDDYIVSASRDKTIKIWEFSTGFCTKTLQGHAEWVRS----AIPSDD 260
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
A L SC+ D + ++W + L GHE V F P +
Sbjct: 261 AKW-LVSCSTDQTARVWDVSSGETKVELRGHEHV-VEVAIFAPVASYAA----------- 307
Query: 270 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
+ L +P +G+F+ T D + R+WD GQ + GH V ++
Sbjct: 308 --IRQLASLDPNASKDASASMAGQFVATGSRDKTIRIWDSISGQCLKTLTGHDNWVRGLA 365
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH 363
F +G + + D R+WDL++GRC +E H
Sbjct: 366 FSPNGKSLLSVSDDKTMRLWDLQSGRCTRTIEAH 399
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
S S Q VAT S ++W + ++T GHD V + F P SL S
Sbjct: 322 ASASMAGQFVATGSRDKTIRIWDSISGQCLKTLTGHDNWVRGLAFSPNGK-----SLLSV 376
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPF 243
+ D +++LW L +E H+ F
Sbjct: 377 SDDKTMRLWDLQSGRCTRTIEAHQHF 402
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,216,539
Number of Sequences: 539616
Number of extensions: 8085381
Number of successful extensions: 37778
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 590
Number of HSP's that attempted gapping in prelim test: 22054
Number of HSP's gapped (non-prelim): 8531
length of query: 471
length of database: 191,569,459
effective HSP length: 121
effective length of query: 350
effective length of database: 126,275,923
effective search space: 44196573050
effective search space used: 44196573050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)