Query psy11350
Match_columns 471
No_of_seqs 832 out of 4355
Neff 10.5
Searched_HMMs 29240
Date Fri Aug 16 16:09:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11350.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11350hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.3E-43 4.4E-48 346.2 37.7 254 143-403 99-377 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 5.8E-43 2E-47 327.6 39.7 256 142-404 3-268 (304)
3 3ow8_A WD repeat-containing pr 100.0 5.2E-43 1.8E-47 330.3 36.6 251 146-403 26-287 (321)
4 1got_B GT-beta; complex (GTP-b 100.0 3.7E-41 1.3E-45 320.5 39.1 278 142-470 45-333 (340)
5 2pbi_B Guanine nucleotide-bind 100.0 3.1E-40 1E-44 315.9 39.3 278 143-470 55-347 (354)
6 3frx_A Guanine nucleotide-bind 100.0 3E-40 1E-44 311.3 38.3 285 142-470 7-307 (319)
7 3ow8_A WD repeat-containing pr 100.0 3.4E-40 1.1E-44 311.1 35.8 261 125-394 55-320 (321)
8 1nr0_A Actin interacting prote 100.0 7E-40 2.4E-44 336.2 39.9 318 144-470 51-469 (611)
9 1vyh_C Platelet-activating fac 100.0 2.7E-40 9.3E-45 322.7 34.3 244 144-394 142-410 (410)
10 1nr0_A Actin interacting prote 100.0 6.5E-40 2.2E-44 336.4 37.1 303 150-470 16-345 (611)
11 3iz6_a 40S ribosomal protein R 100.0 2.3E-40 8E-45 319.9 31.5 254 142-402 56-336 (380)
12 4ery_A WD repeat-containing pr 100.0 1.1E-38 3.6E-43 299.7 39.7 256 141-403 12-276 (312)
13 2xzm_R RACK1; ribosome, transl 100.0 9E-39 3.1E-43 304.5 39.7 249 142-400 11-290 (343)
14 2hes_X YDR267CP; beta-propelle 100.0 1.3E-38 4.4E-43 301.7 36.6 245 142-396 4-281 (330)
15 4gqb_B Methylosome protein 50; 100.0 1.2E-38 4E-43 303.1 35.1 243 148-398 78-334 (344)
16 4g56_B MGC81050 protein; prote 100.0 1.7E-39 5.8E-44 311.0 29.2 246 149-402 39-308 (357)
17 4gqb_B Methylosome protein 50; 100.0 4.1E-39 1.4E-43 306.2 31.5 242 150-400 28-294 (344)
18 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.9E-38 6.7E-43 302.3 35.0 249 142-397 5-285 (345)
19 2pm7_B Protein transport prote 100.0 3.1E-38 1.1E-42 294.5 34.4 243 146-395 3-285 (297)
20 1erj_A Transcriptional repress 100.0 6.4E-38 2.2E-42 304.3 37.2 251 149-406 61-352 (393)
21 2ymu_A WD-40 repeat protein; u 100.0 1E-37 3.6E-42 318.1 40.6 303 144-470 8-365 (577)
22 1got_B GT-beta; complex (GTP-b 100.0 9.9E-38 3.4E-42 296.8 37.7 255 126-392 75-340 (340)
23 4aow_A Guanine nucleotide-bind 100.0 5.3E-37 1.8E-41 291.2 40.2 288 140-470 26-327 (340)
24 3zwl_B Eukaryotic translation 100.0 6.5E-37 2.2E-41 293.5 40.4 253 142-402 22-311 (369)
25 3dm0_A Maltose-binding peripla 100.0 2.5E-37 8.4E-42 322.3 39.1 254 141-403 371-640 (694)
26 4g56_B MGC81050 protein; prote 100.0 1.8E-37 6.1E-42 296.9 33.9 247 145-399 87-347 (357)
27 3mkq_A Coatomer beta'-subunit; 100.0 3.5E-37 1.2E-41 326.9 39.5 257 142-405 3-269 (814)
28 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.5E-37 8.4E-42 294.7 34.2 248 148-402 57-342 (345)
29 2ymu_A WD-40 repeat protein; u 100.0 1.5E-36 5E-41 309.6 42.1 303 144-470 254-570 (577)
30 3bg1_A Protein SEC13 homolog; 100.0 3.3E-38 1.1E-42 297.0 27.3 242 147-395 8-293 (316)
31 1erj_A Transcriptional repress 100.0 5.6E-37 1.9E-41 297.6 35.3 238 151-396 122-390 (393)
32 1sq9_A Antiviral protein SKI8; 100.0 6.6E-37 2.3E-41 297.1 35.8 253 143-403 7-330 (397)
33 3frx_A Guanine nucleotide-bind 100.0 1.4E-36 4.8E-41 286.2 36.5 242 145-396 58-318 (319)
34 2ynn_A Coatomer subunit beta'; 100.0 1.4E-36 4.8E-41 284.3 36.0 245 144-395 47-302 (304)
35 3jrp_A Fusion protein of prote 100.0 9.2E-37 3.1E-41 293.7 33.2 248 146-400 5-292 (379)
36 4ery_A WD repeat-containing pr 100.0 5.6E-36 1.9E-40 281.1 36.3 245 144-394 57-311 (312)
37 2hes_X YDR267CP; beta-propelle 100.0 1.5E-36 5.1E-41 287.5 32.6 238 150-395 56-328 (330)
38 2pbi_B Guanine nucleotide-bind 100.0 4E-36 1.4E-40 287.3 35.6 242 144-392 98-354 (354)
39 2xzm_R RACK1; ribosome, transl 100.0 2E-36 6.8E-41 288.3 33.0 243 145-397 69-342 (343)
40 3ei3_B DNA damage-binding prot 100.0 1.9E-36 6.5E-41 292.8 33.0 256 138-403 59-347 (383)
41 3f3f_A Nucleoporin SEH1; struc 100.0 5.4E-36 1.8E-40 284.3 35.0 252 146-403 5-345 (351)
42 3iz6_a 40S ribosomal protein R 100.0 3.5E-37 1.2E-41 297.7 27.0 263 126-398 86-378 (380)
43 3dw8_B Serine/threonine-protei 100.0 1.3E-36 4.3E-41 300.0 30.3 301 150-470 26-437 (447)
44 1r5m_A SIR4-interacting protei 100.0 5.4E-36 1.8E-40 292.8 33.8 313 148-470 41-415 (425)
45 1gxr_A ESG1, transducin-like e 100.0 2.6E-35 9E-40 278.8 36.8 243 147-399 46-300 (337)
46 3vl1_A 26S proteasome regulato 100.0 1.7E-36 5.7E-41 296.7 29.3 306 154-468 58-408 (420)
47 2pm9_A Protein WEB1, protein t 100.0 1.2E-36 4E-41 297.2 27.7 312 151-470 11-404 (416)
48 3odt_A Protein DOA1; ubiquitin 100.0 2.9E-35 1E-39 275.6 36.0 252 140-405 6-265 (313)
49 4e54_B DNA damage-binding prot 100.0 9.3E-37 3.2E-41 300.2 26.0 222 140-403 107-335 (435)
50 1k8k_C P40, ARP2/3 complex 41 100.0 2E-35 6.7E-40 283.9 33.7 240 149-395 5-274 (372)
51 3v7d_B Cell division control p 100.0 1.5E-34 5.1E-39 286.8 40.5 246 143-402 112-388 (464)
52 3sfz_A APAF-1, apoptotic pepti 100.0 5.3E-35 1.8E-39 324.0 39.5 243 146-395 609-913 (1249)
53 3dwl_C Actin-related protein 2 100.0 1.1E-36 3.6E-41 293.8 22.3 239 148-394 7-280 (377)
54 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2E-34 7E-39 284.4 38.9 306 142-470 108-428 (445)
55 2j04_B YDR362CP, TAU91; beta p 100.0 6E-36 2.1E-40 298.7 27.2 244 150-396 131-429 (524)
56 3i2n_A WD repeat-containing pr 100.0 2.6E-35 9E-40 281.3 30.2 249 145-400 11-296 (357)
57 1yfq_A Cell cycle arrest prote 100.0 2E-34 6.8E-39 273.7 34.9 249 148-405 7-292 (342)
58 3gre_A Serine/threonine-protei 100.0 2.6E-35 8.8E-40 290.0 28.7 313 144-470 54-430 (437)
59 3k26_A Polycomb protein EED; W 100.0 2.8E-35 9.6E-40 281.9 27.3 249 147-400 13-323 (366)
60 3jro_A Fusion protein of prote 100.0 1.5E-35 5.2E-40 310.8 26.8 248 146-400 3-290 (753)
61 4h5i_A Guanine nucleotide-exch 100.0 3.3E-34 1.1E-38 275.0 33.4 194 195-396 134-344 (365)
62 1r5m_A SIR4-interacting protei 100.0 2.1E-34 7.1E-39 281.5 32.7 238 150-397 106-363 (425)
63 1pgu_A Actin interacting prote 100.0 2.8E-34 9.6E-39 294.6 34.6 271 149-428 15-328 (615)
64 2pm9_A Protein WEB1, protein t 100.0 6.3E-35 2.2E-39 284.9 28.0 246 150-401 65-343 (416)
65 3k26_A Polycomb protein EED; W 100.0 7.9E-35 2.7E-39 278.8 27.9 237 150-395 67-366 (366)
66 3sfz_A APAF-1, apoptotic pepti 100.0 6.9E-34 2.4E-38 315.1 39.6 310 144-470 649-1106(1249)
67 1sq9_A Antiviral protein SKI8; 100.0 1.8E-34 6.2E-39 280.0 30.7 249 143-397 53-397 (397)
68 4gga_A P55CDC, cell division c 100.0 1.9E-33 6.4E-38 275.3 36.5 246 147-402 142-402 (420)
69 1gxr_A ESG1, transducin-like e 100.0 2.8E-33 9.6E-38 264.8 36.1 236 150-393 95-335 (337)
70 4a11_B DNA excision repair pro 100.0 1.9E-33 6.6E-38 273.3 34.7 254 143-403 34-373 (408)
71 3i2n_A WD repeat-containing pr 100.0 2.2E-34 7.6E-39 274.8 26.9 246 148-398 61-356 (357)
72 3mkq_A Coatomer beta'-subunit; 100.0 2.8E-33 9.5E-38 297.0 38.1 248 144-398 47-305 (814)
73 4aez_A CDC20, WD repeat-contai 100.0 2.3E-33 8E-38 272.9 34.2 244 150-403 132-388 (401)
74 1k8k_C P40, ARP2/3 complex 41 100.0 7.8E-34 2.7E-38 272.8 30.5 249 144-399 44-365 (372)
75 3dm0_A Maltose-binding peripla 100.0 2.2E-33 7.4E-38 292.5 35.8 242 145-395 423-693 (694)
76 3zwl_B Eukaryotic translation 100.0 3.6E-33 1.2E-37 267.4 34.2 252 143-402 65-353 (369)
77 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-34 3.7E-39 289.7 23.7 243 146-395 201-517 (524)
78 2oaj_A Protein SNI1; WD40 repe 100.0 6E-33 2E-37 295.4 38.3 235 147-392 12-309 (902)
79 3odt_A Protein DOA1; ubiquitin 100.0 6.3E-33 2.2E-37 259.7 34.1 247 143-402 50-303 (313)
80 1pgu_A Actin interacting prote 100.0 1.2E-32 4.2E-37 282.4 37.3 251 143-404 54-337 (615)
81 4aez_A CDC20, WD repeat-contai 100.0 4.1E-33 1.4E-37 271.2 31.8 242 149-400 88-341 (401)
82 3mmy_A MRNA export factor; mRN 100.0 1E-32 3.5E-37 264.1 33.6 253 140-403 27-312 (368)
83 4aow_A Guanine nucleotide-bind 100.0 4.1E-32 1.4E-36 257.4 37.2 265 125-397 58-339 (340)
84 3vl1_A 26S proteasome regulato 100.0 3.6E-33 1.2E-37 273.0 30.5 238 153-397 98-367 (420)
85 2j04_A TAU60, YPL007P, hypothe 100.0 4.9E-34 1.7E-38 278.6 23.3 282 150-469 13-350 (588)
86 1p22_A F-BOX/WD-repeat protein 100.0 4.1E-32 1.4E-36 267.0 35.0 232 147-397 128-367 (435)
87 4gga_A P55CDC, cell division c 100.0 9.7E-32 3.3E-36 263.1 37.0 241 153-405 106-363 (420)
88 3dwl_C Actin-related protein 2 100.0 1.2E-33 4.2E-38 272.3 23.1 242 144-393 47-377 (377)
89 2xyi_A Probable histone-bindin 100.0 9.4E-33 3.2E-37 271.2 29.7 246 146-397 122-412 (430)
90 3v7d_B Cell division control p 100.0 8.2E-32 2.8E-36 267.1 36.4 250 144-407 154-433 (464)
91 3ei3_B DNA damage-binding prot 100.0 1.7E-32 5.7E-37 265.1 29.4 235 149-395 115-382 (383)
92 4ggc_A P55CDC, cell division c 100.0 2.7E-31 9.1E-36 249.4 36.0 242 147-397 62-317 (318)
93 2pm7_B Protein transport prote 100.0 7.9E-32 2.7E-36 251.1 31.7 202 188-396 3-239 (297)
94 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.7E-31 5.8E-36 263.8 33.5 244 153-404 5-353 (450)
95 4ggc_A P55CDC, cell division c 100.0 2.7E-31 9.1E-36 249.4 32.7 238 154-403 27-281 (318)
96 2oaj_A Protein SNI1; WD40 repe 100.0 6.9E-32 2.4E-36 287.2 31.8 254 150-405 209-674 (902)
97 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-32 5.9E-37 266.8 24.9 247 145-398 74-345 (402)
98 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2E-30 6.9E-35 255.7 39.6 242 143-403 150-399 (445)
99 3vu4_A KMHSV2; beta-propeller 100.0 1.5E-31 5.1E-36 255.7 30.1 235 148-397 15-273 (355)
100 4e54_B DNA damage-binding prot 100.0 5E-32 1.7E-36 266.4 26.7 247 144-399 156-434 (435)
101 1p22_A F-BOX/WD-repeat protein 100.0 2.4E-31 8.3E-36 261.5 29.0 241 143-402 164-421 (435)
102 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-31 5.7E-36 259.9 26.6 276 154-466 36-330 (402)
103 1yfq_A Cell cycle arrest prote 100.0 1.2E-30 4.1E-35 247.6 31.1 233 147-392 51-321 (342)
104 3gre_A Serine/threonine-protei 100.0 1.2E-31 4.1E-36 263.8 22.9 260 126-392 84-437 (437)
105 4a11_B DNA excision repair pro 100.0 4.6E-31 1.6E-35 256.5 26.2 281 173-470 22-355 (408)
106 3lrv_A PRE-mRNA-splicing facto 100.0 1.7E-31 6E-36 254.1 21.7 229 159-398 43-295 (343)
107 3bg1_A Protein SEC13 homolog; 100.0 2.7E-31 9.1E-36 249.8 21.3 201 189-396 8-248 (316)
108 3jrp_A Fusion protein of prote 100.0 3.5E-30 1.2E-34 247.7 28.8 207 184-397 1-242 (379)
109 3mmy_A MRNA export factor; mRN 100.0 3.9E-30 1.3E-34 246.2 28.4 240 145-394 79-345 (368)
110 2w18_A PALB2, fancn, partner a 100.0 2.1E-30 7.2E-35 238.1 23.5 209 152-393 111-355 (356)
111 3dw8_B Serine/threonine-protei 100.0 4.7E-30 1.6E-34 252.9 26.6 243 142-394 71-445 (447)
112 1l0q_A Surface layer protein; 100.0 2.1E-28 7E-33 236.9 37.5 246 147-404 27-284 (391)
113 4h5i_A Guanine nucleotide-exch 100.0 1.3E-29 4.4E-34 243.0 26.7 197 150-354 131-344 (365)
114 4gq1_A NUP37; propeller, trans 100.0 2.2E-30 7.4E-35 251.1 21.4 237 150-394 87-388 (393)
115 2xyi_A Probable histone-bindin 100.0 5.3E-29 1.8E-33 244.4 29.6 239 153-397 46-355 (430)
116 3f3f_A Nucleoporin SEH1; struc 100.0 3.9E-29 1.3E-33 237.0 27.7 206 188-400 5-254 (351)
117 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-28 3.8E-33 243.6 31.4 238 149-395 99-391 (450)
118 3bws_A Protein LP49; two-domai 100.0 3.5E-28 1.2E-32 238.6 31.2 240 153-402 123-397 (433)
119 2w18_A PALB2, fancn, partner a 100.0 2.9E-27 1E-31 217.2 30.5 227 155-403 42-322 (356)
120 3jro_A Fusion protein of prote 100.0 2.8E-28 9.4E-33 255.7 26.7 204 187-397 2-240 (753)
121 1l0q_A Surface layer protein; 100.0 4E-27 1.4E-31 227.8 32.8 229 165-404 3-242 (391)
122 2j04_A TAU60, YPL007P, hypothe 100.0 7.5E-28 2.6E-32 235.1 25.9 218 150-383 83-349 (588)
123 3bws_A Protein LP49; two-domai 100.0 4.5E-27 1.5E-31 230.7 31.4 240 147-395 164-432 (433)
124 4gq1_A NUP37; propeller, trans 100.0 4E-28 1.4E-32 235.2 20.5 271 154-470 17-380 (393)
125 3vu4_A KMHSV2; beta-propeller 100.0 9.2E-27 3.1E-31 222.4 29.6 231 153-399 59-340 (355)
126 3lrv_A PRE-mRNA-splicing facto 100.0 2.6E-27 8.9E-32 225.2 23.5 229 152-394 76-332 (343)
127 2ecf_A Dipeptidyl peptidase IV 99.9 2.4E-26 8.3E-31 241.2 27.3 308 152-469 36-444 (741)
128 2ojh_A Uncharacterized protein 99.9 4.9E-24 1.7E-28 197.1 27.0 221 169-398 17-261 (297)
129 1nir_A Nitrite reductase; hemo 99.9 2.4E-23 8.3E-28 209.2 32.9 236 155-399 181-462 (543)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 4E-24 1.4E-28 208.4 25.5 244 146-402 111-393 (415)
131 3vgz_A Uncharacterized protein 99.9 3E-23 1E-27 197.4 31.0 282 151-470 39-334 (353)
132 1nir_A Nitrite reductase; hemo 99.9 3.2E-23 1.1E-27 208.4 31.6 298 159-467 144-496 (543)
133 1xfd_A DIP, dipeptidyl aminope 99.9 1.1E-24 3.8E-29 227.9 21.3 307 154-468 18-428 (723)
134 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.2E-23 2.8E-27 199.1 31.1 220 146-377 172-410 (415)
135 1ri6_A Putative isomerase YBHE 99.9 1.6E-22 5.4E-27 191.4 28.6 241 149-398 34-313 (343)
136 2ojh_A Uncharacterized protein 99.9 3E-23 1E-27 191.7 22.5 230 147-386 36-293 (297)
137 3u4y_A Uncharacterized protein 99.9 3.3E-22 1.1E-26 188.6 27.9 239 150-398 38-307 (331)
138 3o4h_A Acylamino-acid-releasin 99.9 5.8E-23 2E-27 209.4 21.9 233 152-400 21-279 (582)
139 1k32_A Tricorn protease; prote 99.9 6.7E-22 2.3E-26 214.9 30.9 230 154-395 246-502 (1045)
140 2z3z_A Dipeptidyl aminopeptida 99.9 1.8E-22 6E-27 210.7 25.1 300 155-468 28-419 (706)
141 3u4y_A Uncharacterized protein 99.9 1.3E-21 4.5E-26 184.5 28.3 231 158-398 3-255 (331)
142 1jmx_B Amine dehydrogenase; ox 99.9 6.2E-22 2.1E-26 187.9 23.6 239 157-405 4-335 (349)
143 1pby_B Quinohemoprotein amine 99.9 1.6E-21 5.5E-26 184.0 26.3 230 165-405 2-320 (337)
144 1k32_A Tricorn protease; prote 99.9 8.1E-22 2.8E-26 214.2 26.6 240 146-397 197-463 (1045)
145 1ri6_A Putative isomerase YBHE 99.9 5.3E-21 1.8E-25 180.9 28.1 287 165-463 5-336 (343)
146 3hfq_A Uncharacterized protein 99.9 3.2E-21 1.1E-25 183.3 26.3 246 149-400 36-324 (347)
147 2oit_A Nucleoporin 214KDA; NH2 99.9 1.7E-22 5.9E-27 197.6 17.4 212 151-397 35-280 (434)
148 2ecf_A Dipeptidyl peptidase IV 99.9 2E-21 6.9E-26 203.8 24.9 242 153-403 109-422 (741)
149 1z68_A Fibroblast activation p 99.9 7.6E-22 2.6E-26 206.3 17.8 232 157-397 20-348 (719)
150 3scy_A Hypothetical bacterial 99.9 1.3E-19 4.5E-24 173.1 31.8 242 151-400 48-344 (361)
151 2z3z_A Dipeptidyl aminopeptida 99.9 2.3E-20 7.9E-25 194.6 27.2 238 151-397 80-393 (706)
152 1xfd_A DIP, dipeptidyl aminope 99.9 2.9E-20 1E-24 194.4 25.5 270 148-424 53-426 (723)
153 3vgz_A Uncharacterized protein 99.9 4.4E-19 1.5E-23 168.5 29.4 222 153-422 89-328 (353)
154 4a5s_A Dipeptidyl peptidase 4 99.9 9.6E-20 3.3E-24 190.8 26.9 303 154-468 18-434 (740)
155 2oit_A Nucleoporin 214KDA; NH2 99.8 9.1E-20 3.1E-24 178.3 19.1 202 149-394 89-332 (434)
156 3hfq_A Uncharacterized protein 99.8 2.7E-18 9.2E-23 163.0 27.8 224 166-395 4-271 (347)
157 1jof_A Carboxy-CIS,CIS-muconat 99.8 6.2E-19 2.1E-23 168.7 23.2 242 151-396 38-342 (365)
158 1q7f_A NHL, brain tumor CG1071 99.8 1.8E-17 6.3E-22 152.7 31.6 241 149-399 26-284 (286)
159 3scy_A Hypothetical bacterial 99.8 1.4E-17 4.7E-22 159.0 31.1 225 162-394 11-290 (361)
160 3fvz_A Peptidyl-glycine alpha- 99.8 1.1E-17 3.6E-22 157.7 28.9 239 152-395 23-322 (329)
161 3pe7_A Oligogalacturonate lyas 99.8 2.5E-18 8.6E-23 165.7 25.0 222 148-398 26-276 (388)
162 2oiz_A Aromatic amine dehydrog 99.8 5.7E-17 1.9E-21 154.6 25.8 241 147-402 46-343 (361)
163 3o4h_A Acylamino-acid-releasin 99.8 5.8E-18 2E-22 172.4 20.0 227 150-395 61-315 (582)
164 1pby_B Quinohemoprotein amine 99.8 1.5E-17 5.1E-22 156.7 20.9 249 213-469 3-299 (337)
165 1z68_A Fibroblast activation p 99.8 1.3E-17 4.6E-22 174.1 21.8 232 154-395 61-391 (719)
166 1jof_A Carboxy-CIS,CIS-muconat 99.8 1E-16 3.6E-21 153.3 26.2 227 166-398 4-295 (365)
167 3c5m_A Oligogalacturonate lyas 99.8 3.4E-18 1.2E-22 165.0 15.7 235 154-398 37-332 (396)
168 3azo_A Aminopeptidase; POP fam 99.8 7.7E-17 2.6E-21 166.7 26.8 246 149-402 20-331 (662)
169 3e5z_A Putative gluconolactona 99.8 4.2E-16 1.4E-20 144.4 28.4 240 147-399 22-290 (296)
170 1jmx_B Amine dehydrogenase; ox 99.8 5.1E-17 1.7E-21 153.9 20.1 193 200-403 5-292 (349)
171 3pe7_A Oligogalacturonate lyas 99.7 1.3E-16 4.6E-21 153.5 21.2 238 149-394 77-381 (388)
172 2xdw_A Prolyl endopeptidase; a 99.7 9E-16 3.1E-20 159.9 27.7 240 150-397 122-416 (710)
173 1rwi_B Serine/threonine-protei 99.7 3.6E-15 1.2E-19 135.9 27.1 239 154-399 25-268 (270)
174 2dg1_A DRP35, lactonase; beta 99.7 1.6E-14 5.6E-19 136.0 32.2 233 146-386 38-301 (333)
175 2dg1_A DRP35, lactonase; beta 99.7 1.6E-15 5.5E-20 142.9 24.7 238 153-402 6-269 (333)
176 2gop_A Trilobed protease; beta 99.7 8.8E-16 3E-20 145.5 22.9 219 153-394 59-330 (347)
177 4a5s_A Dipeptidyl peptidase 4 99.7 1.9E-15 6.3E-20 158.3 25.8 193 196-397 18-296 (740)
178 3no2_A Uncharacterized protein 99.7 7.8E-15 2.7E-19 134.1 26.7 230 163-403 4-260 (276)
179 3azo_A Aminopeptidase; POP fam 99.7 2.6E-15 9E-20 155.2 24.3 233 157-399 81-373 (662)
180 3c5m_A Oligogalacturonate lyas 99.7 6.6E-16 2.3E-20 148.9 17.5 232 155-397 83-386 (396)
181 2bkl_A Prolyl endopeptidase; m 99.7 7.6E-16 2.6E-20 160.0 18.7 238 150-398 118-400 (695)
182 3fvz_A Peptidyl-glycine alpha- 99.7 5.7E-14 2E-18 132.1 27.5 225 194-425 23-309 (329)
183 2gop_A Trilobed protease; beta 99.7 1.7E-14 6E-19 136.5 23.0 219 152-398 14-294 (347)
184 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.4E-13 4.9E-18 128.1 27.8 239 150-396 15-300 (314)
185 3dsm_A Uncharacterized protein 99.6 6.7E-14 2.3E-18 131.5 25.2 236 154-403 45-309 (328)
186 2z2n_A Virginiamycin B lyase; 99.6 2.5E-12 8.4E-17 118.6 35.0 237 150-397 12-256 (299)
187 2oiz_A Aromatic amine dehydrog 99.6 3.2E-14 1.1E-18 135.5 21.0 214 153-377 108-360 (361)
188 1q7f_A NHL, brain tumor CG1071 99.6 7E-13 2.4E-17 121.9 28.6 203 192-403 27-245 (286)
189 1yr2_A Prolyl oligopeptidase; 99.6 9.7E-14 3.3E-18 145.2 23.3 238 150-397 160-443 (741)
190 1qks_A Cytochrome CD1 nitrite 99.6 2E-12 6.9E-17 129.6 31.4 197 161-404 164-382 (567)
191 3e5z_A Putative gluconolactona 99.6 6.4E-13 2.2E-17 122.8 25.8 208 185-404 18-254 (296)
192 2xdw_A Prolyl endopeptidase; a 99.6 4.7E-13 1.6E-17 139.4 27.0 236 162-405 81-378 (710)
193 2z2n_A Virginiamycin B lyase; 99.6 1E-11 3.6E-16 114.4 32.4 235 151-397 55-297 (299)
194 1qks_A Cytochrome CD1 nitrite 99.6 7.2E-12 2.5E-16 125.6 33.0 237 154-396 198-478 (567)
195 3dsm_A Uncharacterized protein 99.6 8.4E-13 2.9E-17 124.0 24.8 215 172-399 15-257 (328)
196 2qc5_A Streptogramin B lactona 99.6 3.3E-11 1.1E-15 111.0 35.0 238 150-397 17-261 (300)
197 2mad_H Methylamine dehydrogena 99.6 1.1E-11 3.9E-16 118.1 32.2 233 157-402 70-357 (373)
198 2bkl_A Prolyl endopeptidase; m 99.6 3.1E-13 1.1E-17 140.3 22.9 260 161-468 76-381 (695)
199 3sjl_D Methylamine dehydrogena 99.6 1E-12 3.5E-17 124.0 23.9 240 157-405 82-373 (386)
200 3g4e_A Regucalcin; six bladed 99.6 1.1E-11 3.8E-16 114.6 30.5 224 151-384 11-261 (297)
201 3no2_A Uncharacterized protein 99.5 1.5E-12 5.3E-17 118.8 23.7 187 213-404 7-204 (276)
202 1xip_A Nucleoporin NUP159; bet 99.5 2.1E-13 7.1E-18 129.2 17.8 172 154-383 39-232 (388)
203 2ghs_A AGR_C_1268P; regucalcin 99.5 1.7E-11 5.8E-16 115.0 29.3 221 154-385 50-292 (326)
204 3c75_H MADH, methylamine dehyd 99.5 2E-12 6.9E-17 124.1 22.7 239 157-402 122-409 (426)
205 3hrp_A Uncharacterized protein 99.5 9.4E-12 3.2E-16 120.3 27.7 231 153-393 131-408 (409)
206 3iuj_A Prolyl endopeptidase; h 99.5 5E-12 1.7E-16 131.1 22.7 236 150-398 126-408 (693)
207 2qc5_A Streptogramin B lactona 99.5 2.3E-10 7.9E-15 105.3 31.1 233 151-394 60-299 (300)
208 3sjl_D Methylamine dehydrogena 99.4 1.6E-11 5.4E-16 115.8 22.6 287 160-460 40-384 (386)
209 1rwi_B Serine/threonine-protei 99.4 6.3E-11 2.2E-15 107.5 25.3 196 196-398 25-225 (270)
210 3dr2_A Exported gluconolactona 99.4 3.8E-11 1.3E-15 111.4 24.2 227 149-389 41-301 (305)
211 1yr2_A Prolyl oligopeptidase; 99.4 1.7E-11 5.8E-16 128.2 23.7 233 161-403 115-402 (741)
212 2mad_H Methylamine dehydrogena 99.4 1.1E-09 3.6E-14 104.4 32.8 271 160-441 28-352 (373)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.7E-10 5.9E-15 107.1 25.1 203 194-403 17-264 (314)
214 2qe8_A Uncharacterized protein 99.4 2.8E-11 9.6E-16 114.3 18.4 228 150-391 64-317 (343)
215 1xip_A Nucleoporin NUP159; bet 99.3 3.2E-11 1.1E-15 114.2 16.9 147 244-402 39-200 (388)
216 3g4e_A Regucalcin; six bladed 99.3 1.9E-09 6.6E-14 99.4 28.7 204 193-406 11-240 (297)
217 2hz6_A Endoplasmic reticulum t 99.3 3E-13 1E-17 129.1 2.8 190 163-403 8-200 (369)
218 2qe8_A Uncharacterized protein 99.3 2.9E-10 9.8E-15 107.4 22.9 207 153-398 17-281 (343)
219 3c75_H MADH, methylamine dehyd 99.3 2.7E-10 9.3E-15 109.3 22.7 263 162-467 82-388 (426)
220 1mda_H Methylamine dehydrogena 99.3 2E-10 7E-15 108.4 21.3 232 157-404 69-355 (368)
221 3hrp_A Uncharacterized protein 99.3 2.1E-09 7.2E-14 103.8 28.2 195 195-399 131-358 (409)
222 2ghs_A AGR_C_1268P; regucalcin 99.3 4.9E-09 1.7E-13 98.1 28.6 195 197-403 51-267 (326)
223 1kb0_A Quinohemoprotein alcoho 99.3 5.1E-10 1.8E-14 115.1 22.7 253 163-422 127-534 (677)
224 3dr2_A Exported gluconolactona 99.2 2.6E-09 9E-14 98.9 22.3 231 186-469 36-296 (305)
225 1yiq_A Quinohemoprotein alcoho 99.2 3.4E-09 1.1E-13 109.3 23.4 256 163-425 120-535 (689)
226 2iwa_A Glutamine cyclotransfer 99.1 8.7E-09 3E-13 92.0 21.6 196 154-397 22-239 (266)
227 3iuj_A Prolyl endopeptidase; h 99.1 3.7E-09 1.3E-13 109.5 19.0 194 193-397 127-361 (693)
228 2ece_A 462AA long hypothetical 99.1 6.7E-08 2.3E-12 91.8 25.2 192 162-395 93-352 (462)
229 3nol_A Glutamine cyclotransfer 99.0 5.5E-08 1.9E-12 85.8 21.9 182 155-385 45-245 (262)
230 2ece_A 462AA long hypothetical 99.0 6.1E-08 2.1E-12 92.1 23.7 185 283-468 140-399 (462)
231 1mda_H Methylamine dehydrogena 99.0 7.6E-09 2.6E-13 97.6 17.6 265 175-458 47-365 (368)
232 1npe_A Nidogen, entactin; glyc 99.0 6.6E-07 2.3E-11 80.8 29.9 207 153-404 36-247 (267)
233 1fwx_A Nitrous oxide reductase 99.0 8.7E-09 3E-13 101.3 17.8 221 167-395 18-361 (595)
234 1yiq_A Quinohemoprotein alcoho 99.0 5E-08 1.7E-12 100.6 24.1 188 164-359 70-344 (689)
235 3q7m_A Lipoprotein YFGL, BAMB; 99.0 7.3E-07 2.5E-11 84.9 29.9 226 163-403 52-304 (376)
236 1npe_A Nidogen, entactin; glyc 99.0 4E-07 1.4E-11 82.3 26.6 249 165-462 2-263 (267)
237 3nok_A Glutaminyl cyclase; bet 99.0 1.5E-07 5.2E-12 82.9 21.3 180 155-384 57-254 (268)
238 1kb0_A Quinohemoprotein alcoho 99.0 7.6E-08 2.6E-12 99.0 22.5 234 164-406 77-477 (677)
239 1fwx_A Nitrous oxide reductase 98.9 3.1E-08 1.1E-12 97.4 18.0 228 162-397 99-433 (595)
240 3mbr_X Glutamine cyclotransfer 98.9 4.8E-07 1.6E-11 79.1 23.1 184 153-385 21-224 (243)
241 3nol_A Glutamine cyclotransfer 98.9 2.2E-07 7.5E-12 82.0 20.8 168 185-403 32-209 (262)
242 3q7m_A Lipoprotein YFGL, BAMB; 98.9 9.8E-07 3.3E-11 84.0 26.8 226 163-403 102-345 (376)
243 3hxj_A Pyrrolo-quinoline quino 98.9 1E-07 3.5E-12 88.8 19.6 217 164-397 107-326 (330)
244 2fp8_A Strictosidine synthase; 98.9 6.5E-07 2.2E-11 83.4 24.0 233 153-396 19-314 (322)
245 3hxj_A Pyrrolo-quinoline quino 98.9 2.5E-08 8.6E-13 93.1 14.4 222 159-403 26-251 (330)
246 1kv9_A Type II quinohemoprotei 98.9 1.7E-07 6E-12 96.2 21.1 237 164-407 117-500 (668)
247 4a2l_A BT_4663, two-component 98.8 3.5E-05 1.2E-09 81.0 38.6 237 152-399 214-484 (795)
248 2iwa_A Glutamine cyclotransfer 98.8 7E-07 2.4E-11 79.7 21.4 170 185-403 10-189 (266)
249 4a2l_A BT_4663, two-component 98.8 2.1E-05 7E-10 82.8 35.1 235 152-398 262-529 (795)
250 2ad6_A Methanol dehydrogenase 98.8 1.3E-06 4.4E-11 87.9 24.5 254 164-425 115-524 (571)
251 2hz6_A Endoplasmic reticulum t 98.8 9.6E-10 3.3E-14 104.8 1.4 145 213-403 11-157 (369)
252 2p4o_A Hypothetical protein; p 98.8 1.2E-05 4E-10 74.2 29.0 223 153-386 32-279 (306)
253 3v64_C Agrin; beta propeller, 98.8 3.2E-05 1.1E-09 72.6 31.5 250 153-411 34-291 (349)
254 3mbr_X Glutamine cyclotransfer 98.8 2.6E-06 9E-11 74.4 21.8 168 185-403 10-187 (243)
255 1kv9_A Type II quinohemoprotei 98.7 2.1E-06 7.2E-11 88.2 24.6 190 164-360 66-340 (668)
256 1w6s_A Methanol dehydrogenase 98.7 4.1E-06 1.4E-10 84.3 25.8 261 158-426 111-534 (599)
257 3v65_B Low-density lipoprotein 98.7 3.6E-05 1.2E-09 73.4 30.8 248 156-412 80-335 (386)
258 3v9f_A Two-component system se 98.7 6E-05 2E-09 79.1 35.1 236 152-398 257-527 (781)
259 3nok_A Glutaminyl cyclase; bet 98.7 5.2E-06 1.8E-10 73.2 21.2 168 185-403 44-218 (268)
260 3qqz_A Putative uncharacterize 98.7 3.4E-05 1.2E-09 68.3 26.6 207 148-392 22-250 (255)
261 3v9f_A Two-component system se 98.6 8.2E-05 2.8E-09 78.0 32.4 235 152-398 312-571 (781)
262 1ijq_A LDL receptor, low-densi 98.6 0.00022 7.5E-09 65.9 31.5 209 152-405 29-248 (316)
263 2ad6_A Methanol dehydrogenase 98.6 2.6E-05 8.7E-10 78.4 26.6 188 164-361 62-343 (571)
264 1flg_A Protein (quinoprotein e 98.6 1E-05 3.4E-10 81.5 22.9 260 164-425 117-546 (582)
265 1ijq_A LDL receptor, low-densi 98.5 0.00025 8.5E-09 65.5 30.2 185 166-395 3-195 (316)
266 1k3i_A Galactose oxidase precu 98.5 5.2E-06 1.8E-10 85.2 20.5 236 157-397 190-499 (656)
267 3sov_A LRP-6, low-density lipo 98.5 8.7E-05 3E-09 68.6 26.5 239 166-411 6-254 (318)
268 2xe4_A Oligopeptidase B; hydro 98.5 5.2E-06 1.8E-10 86.6 20.1 197 150-393 170-398 (751)
269 1w6s_A Methanol dehydrogenase 98.5 6.1E-05 2.1E-09 75.8 25.9 194 164-361 62-350 (599)
270 3p5b_L Low density lipoprotein 98.5 0.00036 1.2E-08 66.8 30.2 218 150-411 109-336 (400)
271 3amr_A 3-phytase; beta-propell 98.5 0.00012 4.1E-09 67.4 25.0 204 163-403 39-272 (355)
272 3v64_C Agrin; beta propeller, 98.4 0.00043 1.5E-08 64.9 28.3 204 152-361 72-283 (349)
273 2p4o_A Hypothetical protein; p 98.4 0.00043 1.5E-08 63.6 26.6 162 185-395 23-198 (306)
274 2xe4_A Oligopeptidase B; hydro 98.3 3.5E-05 1.2E-09 80.3 21.2 154 196-395 175-354 (751)
275 3p5b_L Low density lipoprotein 98.3 0.0012 4.2E-08 63.0 29.7 189 165-397 84-279 (400)
276 3tc9_A Hypothetical hydrolase; 98.3 0.00016 5.5E-09 69.9 23.1 230 154-394 138-429 (430)
277 2xbg_A YCF48-like protein; pho 98.3 0.0024 8.3E-08 59.1 30.9 236 152-402 35-285 (327)
278 2fp8_A Strictosidine synthase; 98.3 0.00013 4.3E-09 67.7 21.5 200 197-405 21-278 (322)
279 3qqz_A Putative uncharacterize 98.3 0.00018 6.1E-09 63.7 20.9 168 189-400 21-208 (255)
280 2xbg_A YCF48-like protein; pho 98.3 0.0012 4.1E-08 61.2 27.8 228 152-393 79-320 (327)
281 3v65_B Low-density lipoprotein 98.3 0.00038 1.3E-08 66.2 24.8 215 152-372 115-337 (386)
282 1flg_A Protein (quinoprotein e 98.2 0.00011 3.8E-09 73.9 21.6 217 157-382 250-547 (582)
283 3m0c_C LDL receptor, low-densi 98.2 0.0014 4.7E-08 68.1 29.7 211 151-405 422-642 (791)
284 4hw6_A Hypothetical protein, I 98.2 0.0008 2.7E-08 65.0 25.8 231 154-394 140-432 (433)
285 2p9w_A MAL S 1 allergenic prot 98.1 0.0055 1.9E-07 55.9 26.4 211 152-395 12-265 (334)
286 1n7d_A LDL receptor, low-densi 98.1 2.8E-05 9.7E-10 80.0 12.7 209 153-405 406-624 (699)
287 3sov_A LRP-6, low-density lipo 98.0 0.0024 8.2E-08 58.9 24.4 204 153-362 35-247 (318)
288 3kya_A Putative phosphatase; s 98.0 0.0057 1.9E-07 59.5 27.5 238 154-400 140-480 (496)
289 4hw6_A Hypothetical protein, I 98.0 0.0014 4.9E-08 63.2 23.4 192 196-397 140-375 (433)
290 2ism_A Putative oxidoreductase 98.0 0.0037 1.3E-07 58.5 25.2 220 153-383 31-333 (352)
291 1k3i_A Galactose oxidase precu 98.0 0.00014 4.9E-09 74.5 16.5 224 154-384 244-530 (656)
292 3a9g_A Putative uncharacterize 98.0 0.0053 1.8E-07 57.5 25.9 225 153-383 29-330 (354)
293 3m0c_C LDL receptor, low-densi 98.0 0.0061 2.1E-07 63.3 28.1 188 166-398 397-592 (791)
294 3s94_A LRP-6, low-density lipo 97.9 0.0039 1.3E-07 63.1 25.7 225 173-402 17-250 (619)
295 1n7d_A LDL receptor, low-densi 97.9 5.9E-05 2E-09 77.7 12.3 181 173-396 385-572 (699)
296 4a0p_A LRP6, LRP-6, low-densit 97.9 0.026 8.8E-07 57.2 32.5 229 165-402 7-244 (628)
297 3tc9_A Hypothetical hydrolase; 97.9 0.0006 2E-08 65.9 17.4 111 282-394 180-300 (430)
298 4a0p_A LRP6, LRP-6, low-densit 97.8 0.037 1.3E-06 56.0 30.4 207 153-404 340-558 (628)
299 2p9w_A MAL S 1 allergenic prot 97.8 0.0029 9.9E-08 57.7 19.7 163 194-395 12-215 (334)
300 3sre_A PON1, serum paraoxonase 97.8 0.013 4.6E-07 54.4 24.1 207 152-361 49-308 (355)
301 3ei3_A DNA damage-binding prot 97.7 0.066 2.3E-06 58.1 32.7 75 152-229 553-635 (1158)
302 3das_A Putative oxidoreductase 97.6 0.04 1.4E-06 51.0 27.5 227 151-383 30-326 (347)
303 3s94_A LRP-6, low-density lipo 97.6 0.082 2.8E-06 53.4 28.5 201 153-397 349-553 (619)
304 2vpj_A Kelch-like protein 12; 97.5 0.0081 2.8E-07 54.6 18.9 221 163-397 14-280 (301)
305 2g8s_A Glucose/sorbosone dehyd 97.4 0.032 1.1E-06 52.1 22.3 223 154-382 19-340 (353)
306 2xn4_A Kelch-like protein 2; s 97.4 0.014 4.9E-07 53.0 18.5 219 164-397 16-278 (302)
307 3kya_A Putative phosphatase; s 97.3 0.034 1.2E-06 54.0 21.4 196 196-396 140-410 (496)
308 2ism_A Putative oxidoreductase 97.2 0.09 3.1E-06 49.0 22.7 27 195-227 31-57 (352)
309 3amr_A 3-phytase; beta-propell 97.2 0.044 1.5E-06 50.4 19.0 142 213-394 42-209 (355)
310 3pbp_A Nucleoporin NUP82; beta 97.2 0.038 1.3E-06 51.9 18.7 161 160-349 28-208 (452)
311 3pbp_A Nucleoporin NUP82; beta 97.1 0.02 7E-07 53.8 16.5 69 321-390 123-207 (452)
312 1zgk_A Kelch-like ECH-associat 97.1 0.037 1.3E-06 50.4 18.3 220 162-397 23-289 (308)
313 2dk4_A PRE-mRNA-splicing facto 97.1 0.00054 1.8E-08 46.4 3.8 29 79-107 24-52 (76)
314 2xzh_A Clathrin heavy chain 1; 97.0 0.17 6E-06 45.8 33.1 234 158-403 72-340 (365)
315 3ii7_A Kelch-like protein 7; p 97.0 0.043 1.5E-06 49.9 17.9 93 302-397 169-274 (306)
316 1cru_A Protein (soluble quinop 97.0 0.29 1E-05 47.2 26.7 109 153-262 27-163 (454)
317 1bpo_A Protein (clathrin); cla 97.0 0.26 8.9E-06 46.5 32.3 237 158-404 71-340 (494)
318 3sre_A PON1, serum paraoxonase 96.8 0.14 4.8E-06 47.5 19.5 163 219-385 81-287 (355)
319 3ii7_A Kelch-like protein 7; p 96.8 0.16 5.5E-06 46.0 20.1 104 291-397 101-227 (306)
320 3ott_A Two-component system se 96.8 0.61 2.1E-05 48.3 31.9 227 152-398 21-263 (758)
321 1mzw_B U4/U6 snRNP 60KDA prote 96.8 0.00069 2.4E-08 37.3 2.1 20 87-106 2-21 (31)
322 4asc_A Kelch repeat and BTB do 96.6 0.13 4.3E-06 47.0 17.8 104 291-397 148-279 (315)
323 2xzh_A Clathrin heavy chain 1; 96.6 0.42 1.4E-05 43.3 24.1 216 173-401 48-296 (365)
324 3ei3_A DNA damage-binding prot 96.5 1.4 4.7E-05 47.9 31.7 233 221-469 492-756 (1158)
325 2vpj_A Kelch-like protein 12; 96.4 0.19 6.3E-06 45.4 17.2 181 162-355 61-280 (301)
326 2woz_A Kelch repeat and BTB do 96.3 0.18 6.3E-06 45.9 16.5 104 291-397 158-289 (318)
327 1bpo_A Protein (clathrin); cla 96.2 0.89 3E-05 43.0 26.0 216 173-401 47-295 (494)
328 2be1_A Serine/threonine-protei 96.2 0.0077 2.6E-07 55.5 6.4 196 165-400 11-236 (339)
329 1tl2_A L10, protein (tachylect 96.1 0.043 1.5E-06 46.7 10.0 138 153-304 41-203 (236)
330 1xi4_A Clathrin heavy chain; a 96.0 0.45 1.5E-05 51.8 19.4 235 159-403 72-339 (1630)
331 3sbq_A Nitrous-oxide reductase 96.0 0.42 1.4E-05 46.5 17.4 228 167-396 73-409 (638)
332 1tl2_A L10, protein (tachylect 95.9 0.67 2.3E-05 39.4 19.8 167 213-388 6-203 (236)
333 3a9g_A Putative uncharacterize 95.9 1.1 3.6E-05 41.6 26.1 194 195-396 29-297 (354)
334 1cru_A Protein (soluble quinop 95.9 1.4 4.7E-05 42.5 22.2 32 195-232 27-59 (454)
335 4asc_A Kelch repeat and BTB do 95.8 1 3.6E-05 40.7 21.1 93 302-397 117-223 (315)
336 2xn4_A Kelch-like protein 2; s 95.8 0.62 2.1E-05 41.9 17.7 181 163-355 61-278 (302)
337 3sbq_A Nitrous-oxide reductase 95.8 1.6 5.4E-05 42.6 21.1 191 204-395 63-354 (638)
338 2uvk_A YJHT; unknown function, 95.6 0.17 5.7E-06 47.0 13.4 57 345-403 286-350 (357)
339 2woz_A Kelch repeat and BTB do 95.4 1.5 5E-05 39.8 20.1 103 291-397 109-233 (318)
340 2zwa_A Leucine carboxyl methyl 95.4 1.3 4.4E-05 45.4 19.8 106 291-397 500-637 (695)
341 1zgk_A Kelch-like ECH-associat 95.3 0.52 1.8E-05 42.6 15.3 180 163-355 70-289 (308)
342 1xi4_A Clathrin heavy chain; a 95.3 0.98 3.3E-05 49.3 18.8 217 173-401 47-295 (1630)
343 2g8s_A Glucose/sorbosone dehyd 95.0 1.8 6.2E-05 40.0 18.1 29 195-228 18-46 (353)
344 3s25_A Hypothetical 7-bladed b 94.9 2.1 7.3E-05 38.6 21.3 207 160-396 21-256 (302)
345 2uvk_A YJHT; unknown function, 94.4 1.4 4.7E-05 40.7 15.9 21 163-183 19-40 (357)
346 3ott_A Two-component system se 94.1 6.2 0.00021 40.7 35.9 234 153-399 232-506 (758)
347 2zwa_A Leucine carboxyl methyl 93.7 1.1 3.8E-05 45.9 14.7 72 286-357 544-639 (695)
348 2wg3_C Hedgehog-interacting pr 93.1 6.5 0.00022 37.8 25.2 109 154-263 15-159 (463)
349 2be1_A Serine/threonine-protei 93.1 0.46 1.6E-05 43.7 9.6 113 293-405 11-140 (339)
350 3das_A Putative oxidoreductase 92.7 5.9 0.0002 36.4 27.5 201 190-397 27-294 (347)
351 4hvt_A Ritya.17583.B, post-pro 92.6 10 0.00034 38.8 19.6 230 156-394 132-429 (711)
352 3b7f_A Glycosyl hydrolase, BNR 91.0 10 0.00035 35.4 21.9 214 153-373 115-391 (394)
353 3s25_A Hypothetical 7-bladed b 90.8 8.8 0.0003 34.4 21.9 172 158-354 58-256 (302)
354 2wg3_C Hedgehog-interacting pr 89.4 7 0.00024 37.6 14.2 105 282-386 15-160 (463)
355 3q6k_A 43.2 kDa salivary prote 88.8 15 0.00051 34.1 25.9 210 152-382 86-341 (381)
356 4gq2_M Nucleoporin NUP120; bet 86.6 13 0.00046 39.4 15.3 38 324-361 237-274 (950)
357 3qhy_B Beta-lactamase inhibito 82.7 25 0.00085 31.0 18.4 223 154-400 25-251 (282)
358 1suu_A DNA gyrase subunit A; t 81.6 29 0.001 31.1 23.7 181 213-395 10-231 (312)
359 3uc1_A DNA gyrase subunit A; D 80.7 33 0.0011 31.1 18.8 165 153-352 95-278 (327)
360 4hvt_A Ritya.17583.B, post-pro 80.5 53 0.0018 33.4 19.2 190 199-397 133-383 (711)
361 3no0_A DNA gyrase subunit A; D 79.6 32 0.0011 30.3 22.5 193 153-352 24-245 (276)
362 3b7f_A Glycosyl hydrolase, BNR 78.3 42 0.0014 31.0 26.6 209 165-382 23-296 (394)
363 1sqj_A OXG-RCBH, oligoxylogluc 76.3 75 0.0026 32.8 26.5 145 152-301 14-190 (789)
364 4gq2_M Nucleoporin NUP120; bet 74.4 7.8 0.00027 41.2 8.3 39 153-191 236-274 (950)
365 4fhn_B Nucleoporin NUP120; pro 72.2 17 0.0006 39.4 10.6 38 366-403 239-276 (1139)
366 3zwu_A Alkaline phosphatase PH 70.9 18 0.0006 35.9 9.4 58 325-382 478-548 (592)
367 4a9v_A PHOX; hydrolase, beta-p 67.8 28 0.00095 34.2 9.7 61 323-383 476-549 (592)
368 1zi0_A DNA gyrase subunit A; b 67.7 68 0.0023 28.6 21.5 180 213-394 5-225 (307)
369 4fhn_B Nucleoporin NUP120; pro 66.8 18 0.00061 39.3 9.2 38 324-361 239-276 (1139)
370 1suu_A DNA gyrase subunit A; t 65.5 76 0.0026 28.4 27.4 185 161-352 5-230 (312)
371 1zi0_A DNA gyrase subunit A; b 65.5 75 0.0026 28.3 26.3 227 162-395 1-277 (307)
372 3l6v_A GYRA, DNA gyrase subuni 61.8 99 0.0034 28.5 25.2 228 161-394 4-315 (370)
373 3uc1_A DNA gyrase subunit A; D 55.2 1.2E+02 0.0041 27.3 23.0 224 165-395 4-279 (327)
374 3l6v_A GYRA, DNA gyrase subuni 53.7 1.4E+02 0.0046 27.5 23.0 180 213-394 9-264 (370)
375 3zwu_A Alkaline phosphatase PH 49.9 50 0.0017 32.7 8.3 59 197-260 478-548 (592)
376 4a9v_A PHOX; hydrolase, beta-p 49.4 77 0.0026 31.2 9.3 12 196-207 477-488 (592)
377 3f7f_A Nucleoporin NUP120; nuc 47.9 28 0.00096 35.2 6.1 37 154-192 223-259 (729)
378 3f7f_A Nucleoporin NUP120; nuc 47.3 30 0.001 35.1 6.2 36 324-361 223-258 (729)
379 3qhy_B Beta-lactamase inhibito 47.0 1.5E+02 0.005 25.9 15.7 196 154-374 64-263 (282)
380 3no0_A DNA gyrase subunit A; D 46.2 1.5E+02 0.0051 25.8 22.9 191 195-394 24-245 (276)
381 2zux_A YESW protein; beta-prop 40.7 2.7E+02 0.0093 27.3 20.4 43 362-404 361-409 (591)
382 3kci_A Probable E3 ubiquitin-p 39.4 2.3E+02 0.0077 26.0 25.9 205 154-396 106-346 (389)
383 2zux_A YESW protein; beta-prop 39.3 2.9E+02 0.0098 27.1 19.2 56 320-375 361-424 (591)
384 3mez_B Mannose-specific lectin 31.0 1.5E+02 0.0052 21.5 10.3 26 326-353 59-84 (113)
385 3q6k_A 43.2 kDa salivary prote 27.1 3.7E+02 0.013 24.7 20.7 159 152-340 151-341 (381)
386 3kci_A Probable E3 ubiquitin-p 26.3 3.7E+02 0.013 24.5 28.8 110 282-395 160-293 (389)
387 4h3o_A Lectin; cadmium, plant 25.8 1.8E+02 0.0063 20.8 9.9 46 327-382 54-99 (105)
388 1wp5_A Topoisomerase IV; broke 25.6 3.6E+02 0.012 24.0 25.9 227 162-394 3-276 (323)
389 2cn3_A Xyloglucanase, beta-1,4 24.7 5.5E+02 0.019 25.9 24.9 53 154-207 24-84 (737)
390 1q47_A Semaphorin 3A; beta pro 23.7 2.8E+02 0.0094 26.7 8.5 67 324-390 405-487 (495)
391 3ukx_C Bimax2 peptide; arm rep 22.8 19 0.00067 18.0 0.1 10 7-16 18-27 (28)
392 3mez_A Mannose-specific lectin 20.3 2.5E+02 0.0086 20.3 7.6 23 327-350 53-75 (111)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-43 Score=346.24 Aligned_cols=254 Identities=24% Similarity=0.472 Sum_probs=235.4
Q ss_pred ceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCc
Q psy11350 143 SIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGS 222 (471)
Q Consensus 143 ~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 222 (471)
+....+.||..+|++++|+|++.+|++|+.||+|+|||+.+++....+.+|...|.+++|+|++. +|++|+.||+
T Consensus 99 ~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~-----~l~sgs~D~~ 173 (410)
T 1vyh_C 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK-----LLASCSADMT 173 (410)
T ss_dssp SCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS-----EEEEEETTSC
T ss_pred CceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC-----EEEEEeCCCe
Confidence 34556789999999999999999999999999999999999999999999999999999999988 8999999999
Q ss_pred EEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCCCEEEE
Q psy11350 223 VKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLGT 297 (471)
Q Consensus 223 i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~~ 297 (471)
|++||+.+++++..+.+|.. .|.+++|+|++.++++++.|+.+.+|.. ...+.+| ...|.++.|+|++.+|++
T Consensus 174 i~iwd~~~~~~~~~~~~h~~-~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~g~~l~s 251 (410)
T 1vyh_C 174 IKLWDFQGFECIRTMHGHDH-NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH-REWVRMVRPNQDGTLIAS 251 (410)
T ss_dssp CCEEETTSSCEEECCCCCSS-CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECTTSSEEEE
T ss_pred EEEEeCCCCceeEEEcCCCC-CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC-CccEEEEEECCCCCEEEE
Confidence 99999999999999988877 8999999999999999999999777643 3455666 557999999999999999
Q ss_pred EecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCC--------------------CCEEEEEeCCCeEEEEeCCCCeeE
Q psy11350 298 CCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD--------------------GSVVATGGLDAFGRVWDLRTGRCI 357 (471)
Q Consensus 298 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d--------------------~~~l~t~~~dg~i~iwd~~~~~~~ 357 (471)
++.|++|++||+.++++...+.+|...|.+++|+|+ +.+|++|+.|+.|++||++++.++
T Consensus 252 ~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 252 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred EcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 999999999999999999999999999999999996 679999999999999999999999
Q ss_pred EEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 358 MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 358 ~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
..+.+|...|.+++|+|+|++|++|+.||+|++||+.+++++..+.
T Consensus 332 ~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~ 377 (410)
T 1vyh_C 332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377 (410)
T ss_dssp EEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE
T ss_pred EEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 9999999999999999999999999999999999999888776543
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.8e-43 Score=327.61 Aligned_cols=256 Identities=22% Similarity=0.360 Sum_probs=232.8
Q ss_pred cceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCC
Q psy11350 142 LSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221 (471)
Q Consensus 142 ~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg 221 (471)
+.....+.+|...|++++|+|++++|++|+.||.|++||+.++..+..+..|..+|.+++|+|++. +|++|+.|+
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~s~s~d~ 77 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN-----WIIVGSDDF 77 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT-----EEEEEETTS
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCC-----EEEEECCCC
Confidence 345567889999999999999999999999999999999999999999999999999999999998 799999999
Q ss_pred cEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc------ccccCCCCcceEEEEECC-CCCE
Q psy11350 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL------ANLEGHEPFRVSRIKFHP-SGRF 294 (471)
Q Consensus 222 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~------~~~~~~~~~~v~~l~~~~-~~~~ 294 (471)
+|++||+.+++.+..+..|.. .|.+++|+|++.++++++.|+.+++|... ..+.+| ...|.+++|+| ++.+
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHPD-YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGH-EHFVMCVAFNPKDPST 155 (304)
T ss_dssp EEEEEETTTCCEEEEEECCSS-CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCC-CSCEEEEEECTTCTTE
T ss_pred EEEEEECCCCcEEEEEeCCCC-cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhccc-CCcEEEEEECCCCCCE
Confidence 999999999999999998887 89999999999999999999997776432 235566 56899999999 6789
Q ss_pred EEEEecCCeEEEEECCCCcEEEEee-CCCCCeEEEEEeC--CCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEE
Q psy11350 295 LGTCCWDHSWRLWDLNQGQEVLHQE-GHGKPVYCMSFQG--DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371 (471)
Q Consensus 295 l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~--d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 371 (471)
|++|+.|++|++||++++.....+. +|...+..++|+| ++.+|++|+.|+.|++||+++++++..+.+|...|.+++
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~ 235 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAV 235 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEE
Confidence 9999999999999998877665554 5668899999987 778999999999999999999999999999999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCccchheecc
Q psy11350 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQ 404 (471)
Q Consensus 372 ~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 404 (471)
|+|++.+|++|+.||+|++||+.++++++.+..
T Consensus 236 ~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~ 268 (304)
T 2ynn_A 236 FHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV 268 (304)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCceeeeccC
Confidence 999999999999999999999999998877653
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.2e-43 Score=330.33 Aligned_cols=251 Identities=22% Similarity=0.405 Sum_probs=225.0
Q ss_pred eeeecCCcCeEEEEEecC----CCEEEEEeCCCcEEEEeCCCCce--EEEeecCCCCEEEEEEeeCCCCCCccEEEEEeC
Q psy11350 146 CSQVGDTRPISYCSFSPD----SQHVATASWSGLCKLWTVPECEL--VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ 219 (471)
Q Consensus 146 ~~~~gh~~~V~~~~~s~~----~~~l~tg~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~ 219 (471)
..+.+|.++|++++|+|+ +.+|++|+.|++|+||++.+++. ...+.+|...|.+++|+|++. ++++++.
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~-----~l~s~s~ 100 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLP-----IAASSSL 100 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSS-----EEEEEET
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCC-----EEEEEeC
Confidence 455699999999999985 67899999999999999977653 456889999999999999988 7999999
Q ss_pred CCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCCCE
Q psy11350 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRF 294 (471)
Q Consensus 220 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~ 294 (471)
|++|++||+.+++.+..+..+.. .+.+++|+|+++++++++.++.+.++.. ...+..+ ...|.+++|+|++++
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~-~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPV-DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR-GKFILSIAYSPDGKY 178 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTT-CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECS-SSCEEEEEECTTSSE
T ss_pred CCcEEEEECCCCCEEEEEeCCCc-cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCC-CceEEEEEECCCCCE
Confidence 99999999999999888887765 7889999999999999999999777543 2233444 457999999999999
Q ss_pred EEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcC
Q psy11350 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374 (471)
Q Consensus 295 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp 374 (471)
|++++.||.|++||+++++.+..+.+|..+|.+++|+|++++|++|+.|+.|++||+++++++..+.+|...|.+++|+|
T Consensus 179 lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp 258 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP 258 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 375 DGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 375 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
++.+|++|+.|++|++||+.+++++.++.
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 287 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRTCVHTFF 287 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEEEc
Confidence 99999999999999999999988776553
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.7e-41 Score=320.54 Aligned_cols=278 Identities=22% Similarity=0.255 Sum_probs=241.3
Q ss_pred cceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCC
Q psy11350 142 LSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221 (471)
Q Consensus 142 ~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg 221 (471)
+.....+.||..+|++++|+|++++|++|+.||.|+|||+.+++.+..+..|...|.+++|+|++. +|++|+.|+
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~-----~l~s~~~d~ 119 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN-----YVACGGLDN 119 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSS-----EEEEEETTC
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCC-----EEEEEeCCC
Confidence 345567889999999999999999999999999999999999999999999999999999999998 899999999
Q ss_pred cEEEEeCCCCc----ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCC
Q psy11350 222 SVKLWSLDKDT----PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSG 292 (471)
Q Consensus 222 ~i~iwd~~~~~----~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~ 292 (471)
.|++|++.++. ....+.+|.. .+.++.|++++. +++++.|+.+.+|.. ...+.+| ...|.+++|+|++
T Consensus 120 ~v~iw~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~~ 196 (340)
T 1got_B 120 ICSIYNLKTREGNVRVSRELAGHTG-YLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGH-TGDVMSLSLAPDT 196 (340)
T ss_dssp EEEEEETTTCSBSCEEEEEEECCSS-CEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTS
T ss_pred eEEEEECccCCCcceeEEEecCCCc-cEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCC-CCceEEEEECCCC
Confidence 99999998753 3445666765 899999998876 889999999777543 3445666 5689999999999
Q ss_pred CEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecc--cCcCEEEE
Q psy11350 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG--HLKSVFSV 370 (471)
Q Consensus 293 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~~ 370 (471)
++|++|+.|++|++||+++++++..+.+|...|++++|+|++++|++|+.||.|++||+++++.+..+.. +...|+++
T Consensus 197 ~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 276 (340)
T 1got_B 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276 (340)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999988877652 33579999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCccchheecccCCCccceeeccccceeeeecccCCCcccccchhhhcccccceeee
Q psy11350 371 DFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPIPLLL 450 (471)
Q Consensus 371 ~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (471)
+|+|+|++|++|+.||.|++||+.+++.+..+..+ ..
T Consensus 277 ~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h-------------------------------------------~~ 313 (340)
T 1got_B 277 SFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH-------------------------------------------DN 313 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC-------------------------------------------SS
T ss_pred EECCCCCEEEEECCCCeEEEEEcccCcEeeEeecC-------------------------------------------CC
Confidence 99999999999999999999999887765443211 11
Q ss_pred cccceeeeecCCeEEEeecC
Q psy11350 451 DIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 451 ~~~~l~fs~dg~~lA~~~~~ 470 (471)
.+..++|+|||.+||.++.+
T Consensus 314 ~v~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 314 RVSCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp CEEEEEECTTSSCEEEEETT
T ss_pred cEEEEEEcCCCCEEEEEcCC
Confidence 24567899999999988765
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.1e-40 Score=315.85 Aligned_cols=278 Identities=21% Similarity=0.248 Sum_probs=240.9
Q ss_pred ceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCc
Q psy11350 143 SIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGS 222 (471)
Q Consensus 143 ~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 222 (471)
.....+.||..+|++++|+|++++|++|+.||+|+|||..+++....+..|...|.+++|+|++. ++++|+.|+.
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~-----~lasg~~d~~ 129 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGC-----AIACGGLDNK 129 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSS-----EEEEESTTSE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCC-----EEEEeeCCCC
Confidence 34567889999999999999999999999999999999999999999999999999999999998 7999999999
Q ss_pred EEEEeCCCC------cceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECC-
Q psy11350 223 VKLWSLDKD------TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHP- 290 (471)
Q Consensus 223 i~iwd~~~~------~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~- 290 (471)
+++|++... .....+..|.. .|.++.|+|++..+++++.|+.+++|.. ...+.+| ...|.+++|+|
T Consensus 130 i~v~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h-~~~v~~~~~~~~ 207 (354)
T 2pbi_B 130 CSVYPLTFDKNENMAAKKKSVAMHTN-YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGH-GADVLCLDLAPS 207 (354)
T ss_dssp EEEEECCCCTTCCSGGGCEEEEECSS-CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECCC
T ss_pred EEEEEEeccccccccccceeeeccCC-cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC-CCCeEEEEEEeC
Confidence 999998644 23445555655 8999999999999999999999777643 3455666 55799999988
Q ss_pred -CCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEeccc--CcCE
Q psy11350 291 -SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH--LKSV 367 (471)
Q Consensus 291 -~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h--~~~v 367 (471)
++++|++|+.||+|++||+++++++..+.+|...|++++|+|++.+|++|+.|++|++||+++++.+..+..+ ...+
T Consensus 208 ~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~ 287 (354)
T 2pbi_B 208 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGA 287 (354)
T ss_dssp SSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccce
Confidence 5689999999999999999999999999999999999999999999999999999999999999887776543 3578
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccCCCccceeeccccceeeeecccCCCcccccchhhhcccccce
Q psy11350 368 FSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPIP 447 (471)
Q Consensus 368 ~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (471)
.+++|+|++.+|++|+.|++|++||+.+++.+..+..+
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h------------------------------------------ 325 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGH------------------------------------------ 325 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCC------------------------------------------
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECC------------------------------------------
Confidence 99999999999999999999999999888765433211
Q ss_pred eeecccceeeeecCCeEEEeecC
Q psy11350 448 LLLDIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 448 ~~~~~~~l~fs~dg~~lA~~~~~ 470 (471)
...+..++|+|||++||+++.+
T Consensus 326 -~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 326 -ENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp -SSCEEEEEECTTSSCEEEEETT
T ss_pred -CCcEEEEEECCCCCEEEEEcCC
Confidence 1235678999999999998865
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3e-40 Score=311.29 Aligned_cols=285 Identities=20% Similarity=0.292 Sum_probs=242.5
Q ss_pred cceeeeeecCCcCeEEEEEecCC-CEEEEEeCCCcEEEEeCCC-----CceEEEeecCCCCEEEEEEeeCCCCCCccEEE
Q psy11350 142 LSIYCSQVGDTRPISYCSFSPDS-QHVATASWSGLCKLWTVPE-----CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLA 215 (471)
Q Consensus 142 ~~~~~~~~gh~~~V~~~~~s~~~-~~l~tg~~dg~i~iwd~~~-----~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~ 215 (471)
+.+...+.||.++|++++|+|++ ++|++|+.|++|++|++.+ +.++..+.+|...|.+++|+|++. +|+
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~-----~l~ 81 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA-----YAL 81 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS-----EEE
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC-----EEE
Confidence 45667889999999999999965 8999999999999999864 345778899999999999999998 799
Q ss_pred EEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc----cccccCCCCcceEEEEECCC
Q psy11350 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP----LANLEGHEPFRVSRIKFHPS 291 (471)
Q Consensus 216 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~----~~~~~~~~~~~v~~l~~~~~ 291 (471)
+|+.|++|++||+.+++.+..+.+|.. .|.+++|+|++.++++++.|+.+++|.. ...+.+| ...|.++.|+|.
T Consensus 82 s~s~D~~v~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h-~~~v~~~~~~~~ 159 (319)
T 3frx_A 82 SASWDKTLRLWDVATGETYQRFVGHKS-DVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGH-NDWVSQVRVVPN 159 (319)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCC-SSCEEEEEECCC
T ss_pred EEeCCCEEEEEECCCCCeeEEEccCCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEecc-CCcEEEEEEccC
Confidence 999999999999999999999998887 8999999999999999999999887653 3345556 557999999995
Q ss_pred ------CCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCc
Q psy11350 292 ------GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365 (471)
Q Consensus 292 ------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~ 365 (471)
+..|++++.|++|++||+++++....+.+|..+|.+++|+|++++|++|+.||.|++||+.+++++..+..+ .
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~ 238 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-D 238 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-S
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-C
Confidence 448999999999999999999999999999999999999999999999999999999999999999888754 6
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccCCCccceeeccccceeeeecccCCCcccccchhhhccccc
Q psy11350 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEP 445 (471)
Q Consensus 366 ~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (471)
.|.+++|+|++.+|++++.+ .+++|++..+..+..+...... . .
T Consensus 239 ~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~--------------------------~---------~ 282 (319)
T 3frx_A 239 EVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAG--------------------------Y---------S 282 (319)
T ss_dssp CEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTT--------------------------C---------C
T ss_pred cEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccc--------------------------c---------c
Confidence 89999999999999988765 5999999877665443211000 0 0
Q ss_pred ceeeecccceeeeecCCeEEEeecC
Q psy11350 446 IPLLLDIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 446 ~~~~~~~~~l~fs~dg~~lA~~~~~ 470 (471)
......+..++|+|||++||..+.+
T Consensus 283 ~~~~~~v~~~~~spdg~~l~sg~~D 307 (319)
T 3frx_A 283 KAAEPHAVSLAWSADGQTLFAGYTD 307 (319)
T ss_dssp GGGCCCEEEEEECTTSSEEEEEETT
T ss_pred cCcCcceeEEEECCCCCEEEEeecC
Confidence 0111234578999999999998865
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=311.11 Aligned_cols=261 Identities=19% Similarity=0.337 Sum_probs=234.4
Q ss_pred cchhhhhhHHHHhhccccceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEee
Q psy11350 125 EATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204 (471)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~ 204 (471)
..++.++.|++.. ........+.||...|.+++|+|++.++++|+.|++|++||+.+++.+..+..|...+.+++|+|
T Consensus 55 s~D~~v~vW~~~~--~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp 132 (321)
T 3ow8_A 55 SLDDLVKVWKWRD--ERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP 132 (321)
T ss_dssp ETTSCEEEEEEET--TEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECT
T ss_pred cCCCCEEEEECCC--CCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECC
Confidence 3444555554322 12234456789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCC
Q psy11350 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHE 279 (471)
Q Consensus 205 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~ 279 (471)
++. +|++++.||.|++|++.+++....+..+.. .+.+++|+|++++|++++.|+.+.++.. ...+.+|
T Consensus 133 dg~-----~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~-~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h- 205 (321)
T 3ow8_A 133 DSQ-----YLATGTHVGKVNIFGVESGKKEYSLDTRGK-FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH- 205 (321)
T ss_dssp TSS-----EEEEECTTSEEEEEETTTCSEEEEEECSSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-
T ss_pred CCC-----EEEEEcCCCcEEEEEcCCCceeEEecCCCc-eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccc-
Confidence 998 799999999999999999998888887765 8999999999999999999999777543 3345566
Q ss_pred CcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEE
Q psy11350 280 PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359 (471)
Q Consensus 280 ~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~ 359 (471)
...|.+++|+|++++|++++.|++|++||+++++.+..+.+|...|.+++|+|++.+|++++.|++|++||+.+++++..
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~ 285 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHT 285 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEE
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11350 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 360 ~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~ 394 (471)
+.+|...|.+++|+|++.+|++++.||+|++||+.
T Consensus 286 ~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 286 FFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999999999999963
No 8
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7e-40 Score=336.22 Aligned_cols=318 Identities=17% Similarity=0.252 Sum_probs=251.4
Q ss_pred eeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC--ceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCC-
Q psy11350 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC--ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD- 220 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d- 220 (471)
....+.+|...|++++|+|+|++||+|+.||+|+|||+.++ .....+.+|.++|.+++|+|++. .|++++.+
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~-----~l~~~~~~~ 125 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK-----RIAAVGEGR 125 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSC-----EEEEEECCS
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCC-----EEEEEECCC
Confidence 44567799999999999999999999999999999998754 34567889999999999999998 68887765
Q ss_pred ---CcEEEEeCCCCcceeeecCCCCcceEEEEECCCCC-EEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCC
Q psy11350 221 ---GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPS 291 (471)
Q Consensus 221 ---g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~ 291 (471)
+.|++|| ++.....+.+|.. .|.+++|+|++. .+++++.|+.+++|.. ...+.+| ...|.+++|+|+
T Consensus 126 ~~~~~v~~wd--~~~~~~~l~gh~~-~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H-~~~V~~v~fspd 201 (611)
T 1nr0_A 126 ERFGHVFLFD--TGTSNGNLTGQAR-AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH-TKFVHSVRYNPD 201 (611)
T ss_dssp SCSEEEEETT--TCCBCBCCCCCSS-CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC-SSCEEEEEECTT
T ss_pred CceeEEEEee--CCCCcceecCCCC-CceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccc-cCceEEEEECCC
Confidence 4677777 5667777888877 899999999997 5999999999888653 2356666 568999999999
Q ss_pred CCEEEEEecCCeEEEEECCCCcEEEEee-------CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEE------
Q psy11350 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQE-------GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM------ 358 (471)
Q Consensus 292 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~------ 358 (471)
+++|++++.|++|++||+.+++.+..+. +|...|.+++|+|++++|++++.|++|++||+.+++++.
T Consensus 202 g~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~ 281 (611)
T 1nr0_A 202 GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGT 281 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCC
Confidence 9999999999999999999999888774 799999999999999999999999999999999876543
Q ss_pred -------------------------------------EecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchhe
Q psy11350 359 -------------------------------------FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW 401 (471)
Q Consensus 359 -------------------------------------~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 401 (471)
.+.+|...|++++|+|+|++|++++.|++|++||+.++++...
T Consensus 282 ~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 282 RIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp SGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC
T ss_pred CccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeee
Confidence 3457899999999999999999999999999999999887655
Q ss_pred ecccCCC---------ccceeeccccceeeeecccCCCcccc------cc--------hhh----------------hcc
Q psy11350 402 CTQLLPN---------SIGVTSLLTDLYIDVLESLNPGIGNI------IS--------SAL----------------KEQ 442 (471)
Q Consensus 402 ~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~------~~--------~~~----------------~~~ 442 (471)
+...+.. ...+++...|..+.+|.......... +. +.. ...
T Consensus 362 ~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~ 441 (611)
T 1nr0_A 362 FPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 441 (611)
T ss_dssp SSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTE
T ss_pred cccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCc
Confidence 4322221 12345556677777776543221100 00 000 000
Q ss_pred cccceeeecccceeeeecCCeEEEeecC
Q psy11350 443 VEPIPLLLDIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 443 ~~~~~~~~~~~~l~fs~dg~~lA~~~~~ 470 (471)
+..++....+..++|+|||++||+.+.+
T Consensus 442 ~~~~~~~~~v~~va~spdg~~lasgs~D 469 (611)
T 1nr0_A 442 LTEVPISYNSSCVALSNDKQFVAVGGQD 469 (611)
T ss_dssp EEEEECSSCEEEEEECTTSCEEEEEETT
T ss_pred eeeeecCCCceEEEEeCCCCEEEEeCCC
Confidence 1111222345689999999999998865
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-40 Score=322.67 Aligned_cols=244 Identities=27% Similarity=0.481 Sum_probs=226.5
Q ss_pred eeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcE
Q psy11350 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 223 (471)
....+.+|..+|.+++|+|++++|++|+.||+|++||+.+++++..+.+|...|.+++|+|++. +|++|+.|++|
T Consensus 142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~-----~l~s~s~D~~i 216 (410)
T 1vyh_C 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGD-----HIVSASRDKTI 216 (410)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSS-----EEEEEETTSEE
T ss_pred EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCC-----EEEEEeCCCeE
Confidence 3456789999999999999999999999999999999999999999999999999999999988 79999999999
Q ss_pred EEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCC-------
Q psy11350 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPS------- 291 (471)
Q Consensus 224 ~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~------- 291 (471)
++||+.++.++..+.+|.. .|.++.|+|++.++++++.|+.+++|.. ...+..| ...|.+++|+|+
T Consensus 217 ~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~ 294 (410)
T 1vyh_C 217 KMWEVQTGYCVKTFTGHRE-WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH-RHVVECISWAPESSYSSIS 294 (410)
T ss_dssp EEEETTTCCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECCSCGGGGGG
T ss_pred EEEECCCCcEEEEEeCCCc-cEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCC-CceEEEEEEcCcccccchh
Confidence 9999999999999998877 8999999999999999999999877643 2345566 568999999996
Q ss_pred -------------CCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEE
Q psy11350 292 -------------GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358 (471)
Q Consensus 292 -------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~ 358 (471)
+.+|++|+.|++|++||+++++++..+.+|...|++++|+|++.+|++|+.||.|++||+.+++++.
T Consensus 295 ~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~ 374 (410)
T 1vyh_C 295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 374 (410)
T ss_dssp GCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCE
T ss_pred hhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 6789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11350 359 FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 359 ~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~ 394 (471)
.+.+|...|++++|+|++.+|++|+.||+|++|+++
T Consensus 375 ~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 375 TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999999999999999999999999999974
No 10
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.5e-40 Score=336.42 Aligned_cols=303 Identities=17% Similarity=0.181 Sum_probs=250.4
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCC
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD 229 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 229 (471)
.+.+.+.+++|+|||++||+++ ++.|++|++.+++....+.+|...|++++|+|++. +|++|+.||+|+|||+.
T Consensus 16 ~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~-----~lasg~~d~~v~lWd~~ 89 (611)
T 1nr0_A 16 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGY-----YCASGDVHGNVRIWDTT 89 (611)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSS-----EEEEEETTSEEEEEESS
T ss_pred cccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCc-----EEEEEeCCCCEEEeECC
Confidence 4677888999999999999998 67999999999999999999999999999999998 89999999999999997
Q ss_pred CCcc--eeeecCCCCcceEEEEECCCCCEEEEEeCCC----eEEec---cccccccCCCCcceEEEEECCCCC-EEEEEe
Q psy11350 230 KDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDH----SWRLD---TPLANLEGHEPFRVSRIKFHPSGR-FLGTCC 299 (471)
Q Consensus 230 ~~~~--~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~----~~~~~---~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~ 299 (471)
+++. ...+..|.. .|.+++|+|+++++++++.+. .+.++ .....+.+| ...|.+++|+|++. .|++++
T Consensus 90 ~~~~~~~~~~~~~~~-~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh-~~~v~~v~f~p~~~~~l~s~s 167 (611)
T 1nr0_A 90 QTTHILKTTIPVFSG-PVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQ-ARAMNSVDFKPSRPFRIISGS 167 (611)
T ss_dssp STTCCEEEEEECSSS-CEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCC-SSCEEEEEECSSSSCEEEEEE
T ss_pred CCcceeeEeecccCC-ceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCC-CCCceEEEECCCCCeEEEEEe
Confidence 5543 445666765 899999999999999988763 45444 344556777 56899999999987 599999
Q ss_pred cCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec-------ccCcCEEEEEE
Q psy11350 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE-------GHLKSVFSVDF 372 (471)
Q Consensus 300 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~~~~ 372 (471)
.|++|++||..++++...+.+|...|++++|+|+|++|++|+.|++|++||+.+++++..+. +|.+.|.+++|
T Consensus 168 ~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~ 247 (611)
T 1nr0_A 168 DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW 247 (611)
T ss_dssp TTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEE
T ss_pred CCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999988884 79999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCccchheecccCC----------CccceeeccccceeeeecccCCCcccccchhhhcc
Q psy11350 373 SPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLP----------NSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQ 442 (471)
Q Consensus 373 sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 442 (471)
+|+|++|++++.|++|++||+.+++++.++..... ....+++...+..+.+|..........+
T Consensus 248 spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~------- 320 (611)
T 1nr0_A 248 SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVR------- 320 (611)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEE-------
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEE-------
Confidence 99999999999999999999999988877653322 1223444455555555553322110000
Q ss_pred cccceeeecccceeeeecCCeEEEeecC
Q psy11350 443 VEPIPLLLDIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 443 ~~~~~~~~~~~~l~fs~dg~~lA~~~~~ 470 (471)
......+..++|+|||++||.++.+
T Consensus 321 ---~gh~~~v~~l~~spdg~~l~s~s~D 345 (611)
T 1nr0_A 321 ---YGHNKAITALSSSADGKTLFSADAE 345 (611)
T ss_dssp ---CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ---cCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 0122357889999999999998765
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.3e-40 Score=319.92 Aligned_cols=254 Identities=22% Similarity=0.306 Sum_probs=220.6
Q ss_pred cceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCC
Q psy11350 142 LSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221 (471)
Q Consensus 142 ~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg 221 (471)
+.....+.||.++|++++|+|++++|++|+.||+|+|||+.+++....+..|...|.+++|+|++. +|++|+.|+
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~-----~las~~~d~ 130 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQ-----SVACGGLDS 130 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSS-----EEEECCSSS
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCC-----EEEEeeCCC
Confidence 345567889999999999999999999999999999999999999999999999999999999998 799999999
Q ss_pred cEEEEeCCCCc-------ceeeecCCCCcceEEEEECCCC-CEEEEEeCCCeEEeccccc-----cc-----cCCCCcce
Q psy11350 222 SVKLWSLDKDT-------PLANLEGHEPFRVSRIKFHPSG-RFLGTCCWDHSWRLDTPLA-----NL-----EGHEPFRV 283 (471)
Q Consensus 222 ~i~iwd~~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~i~~~~~d~~~~~~~~~~-----~~-----~~~~~~~v 283 (471)
.+++|++.+.. ....+.+|.. .+.++.|+|++ ..+++++.|+.+.+|.... .+ .+| ...|
T Consensus 131 ~v~iw~~~~~~~~~~~~~~~~~~~gh~~-~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h-~~~v 208 (380)
T 3iz6_a 131 ACSIFNLSSQADRDGNMPVSRVLTGHKG-YASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH-TADV 208 (380)
T ss_dssp CCEEEECCCCSSCCCSSTTCCBCCCCSS-CCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC-CSCE
T ss_pred cEEEEECCCCccccCCccceeeccCCCc-ceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC-ccCe
Confidence 99999986532 3345566665 78999999975 5799999999988765321 11 344 5679
Q ss_pred EEEEECC-CCCEEEEEecCCeEEEEECC-CCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec
Q psy11350 284 SRIKFHP-SGRFLGTCCWDHSWRLWDLN-QGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361 (471)
Q Consensus 284 ~~l~~~~-~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~ 361 (471)
.+++|+| ++++|++|+.|++|++||++ ..+.+..+.+|...|++++|+|++.+|++|+.||+|++||+++++++..+.
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 9999987 88999999999999999998 457788899999999999999999999999999999999999999988876
Q ss_pred ccC-------cCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchhee
Q psy11350 362 GHL-------KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 362 ~h~-------~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
.+. ..|++++|+|+|++|++|+.||.|++||+..++.+..+
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEE
Confidence 543 24899999999999999999999999999888766543
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-38 Score=299.74 Aligned_cols=256 Identities=25% Similarity=0.480 Sum_probs=227.4
Q ss_pred ccceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCC
Q psy11350 141 SLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220 (471)
Q Consensus 141 ~~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d 220 (471)
.+.....+.||..+|++++|+|++++|++|+.||.|++|++.+++....+.+|...|.+++|+|++. +|++++.|
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-----~l~s~~~d 86 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-----LLVSASDD 86 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-----EEEEEETT
T ss_pred CceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCC-----EEEEECCC
Confidence 3556677889999999999999999999999999999999999999999999999999999999988 79999999
Q ss_pred CcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCCCEE
Q psy11350 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFL 295 (471)
Q Consensus 221 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l 295 (471)
|.|++||+.+++.+..+..|.. .|.++.|+|+++++++++.|+.+.++.. ...+..| ...|.+++|+|++++|
T Consensus 87 ~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l 164 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKGHSN-YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-SDPVSAVHFNRDGSLI 164 (312)
T ss_dssp SEEEEEETTTCCEEEEEECCSS-CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEE
T ss_pred CEEEEEECCCCcEEEEEcCCCC-CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC-CCcEEEEEEcCCCCEE
Confidence 9999999999999999988876 8999999999999999999999777543 2344555 5689999999999999
Q ss_pred EEEecCCeEEEEECCCCcEEEEee-CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEE---EEE
Q psy11350 296 GTCCWDHSWRLWDLNQGQEVLHQE-GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVF---SVD 371 (471)
Q Consensus 296 ~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~---~~~ 371 (471)
++++.||.|++||+++++.+..+. .+..++.+++|+|++++|++++.|+.|++||+++++++..+.+|...+. ...
T Consensus 165 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
T 4ery_A 165 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 244 (312)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEE
T ss_pred EEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEE
Confidence 999999999999999998877664 5667899999999999999999999999999999999999988876533 223
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 372 ~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
..+++.+|++|+.||.|++||+.+++++..+.
T Consensus 245 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 276 (312)
T 4ery_A 245 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 276 (312)
T ss_dssp ECSSSCEEEECCTTSCEEEEETTTCCEEEEEC
T ss_pred EeCCCcEEEEECCCCEEEEEECCCchhhhhhh
Confidence 34678999999999999999999988776554
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=9e-39 Score=304.46 Aligned_cols=249 Identities=21% Similarity=0.313 Sum_probs=214.1
Q ss_pred cceeeeeecCCcCeEEEEE-----ec-CCCEEEEEeCCCcEEEEeCCC-------CceEEEeecCCCCEEEEEEeeCCCC
Q psy11350 142 LSIYCSQVGDTRPISYCSF-----SP-DSQHVATASWSGLCKLWTVPE-------CELVQTFRGHDCNVGAIEFHPLPSE 208 (471)
Q Consensus 142 ~~~~~~~~gh~~~V~~~~~-----s~-~~~~l~tg~~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~ 208 (471)
+.....+.||+.+|++++| ++ ++++|++|+.|++|++||+.+ +.....+.+|...|.+++|+|++.
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~- 89 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC- 89 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT-
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC-
Confidence 4456678899999999999 76 899999999999999999864 345677889999999999999988
Q ss_pred CCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccccc-------ccCCCCc
Q psy11350 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN-------LEGHEPF 281 (471)
Q Consensus 209 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~-------~~~~~~~ 281 (471)
++++|+.|++|++||+.+++.+..+.+|.. .|.+++|+|+++++++++.|+.+++|..... ...| ..
T Consensus 90 ----~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~-~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~-~~ 163 (343)
T 2xzm_R 90 ----FAISSSWDKTLRLWDLRTGTTYKRFVGHQS-EVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENH-SD 163 (343)
T ss_dssp ----EEEEEETTSEEEEEETTSSCEEEEEECCCS-CEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSC-SS
T ss_pred ----EEEEEcCCCcEEEEECCCCcEEEEEcCCCC-cEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCC-Cc
Confidence 799999999999999999999999998877 8999999999999999999999888754211 1134 55
Q ss_pred ceEEEEECCCC----------CEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeC
Q psy11350 282 RVSRIKFHPSG----------RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351 (471)
Q Consensus 282 ~v~~l~~~~~~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~ 351 (471)
.|.+++|+|++ .+|++++.||+|++||. ..+....+.+|...|++++|+|+|++|++|+.||.|++||+
T Consensus 164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 79999999987 78999999999999994 56777788999999999999999999999999999999999
Q ss_pred CC-CeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchh
Q psy11350 352 RT-GRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400 (471)
Q Consensus 352 ~~-~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 400 (471)
.. ..+...+. +...|.+++|+|++.+++++ .|+.|++||+.+++...
T Consensus 243 ~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 243 LNLTYPQREFD-AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp SCCSSCSEEEE-CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCS
T ss_pred CCCcccceeec-CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCc
Confidence 54 44444443 55679999999999887655 57889999998876554
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-38 Score=301.65 Aligned_cols=245 Identities=24% Similarity=0.390 Sum_probs=206.9
Q ss_pred cceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC--ceEEEe-ec-CCCCEEEEEEeeCCCCCCccEEEEE
Q psy11350 142 LSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC--ELVQTF-RG-HDCNVGAIEFHPLPSEGAVCSLASC 217 (471)
Q Consensus 142 ~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~--~~~~~~-~~-h~~~v~~l~~~~~~~~~~~~~l~s~ 217 (471)
+.....+.+|..+|.+++|+|+ +||+|+.||.|++||+.++ .....+ .+ |...|.+++|+|++. +|++|
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-----~las~ 76 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS-----LLAAG 76 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS-----EEEEE
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC-----EEEEE
Confidence 4456678899999999999997 9999999999999999875 445555 34 999999999999988 89999
Q ss_pred eCCCcEEEEeCCC-------CcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc---------cccccCCCCc
Q psy11350 218 AQDGSVKLWSLDK-------DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP---------LANLEGHEPF 281 (471)
Q Consensus 218 ~~dg~i~iwd~~~-------~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~---------~~~~~~~~~~ 281 (471)
+.|++|+|||+.. .+.+..+.+|.. .|.+++|+|++++|++++.|+.+++|.. ...+.+| ..
T Consensus 77 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h-~~ 154 (330)
T 2hes_X 77 SFDSTVSIWAKEESADRTFEMDLLAIIEGHEN-EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH-SQ 154 (330)
T ss_dssp ETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC-SS
T ss_pred eCCCcEEEEEcccCcCccccceeEEEEcCCCC-cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC-CC
Confidence 9999999999853 345566777776 8999999999999999999999777654 1234556 56
Q ss_pred ceEEEEECCCCCEEEEEecCCeEEEEECCCC--cEEEEeeCCCCCeEEEEEeCC--CCEEEEEeCCCeEEEEeCCCC---
Q psy11350 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG--QEVLHQEGHGKPVYCMSFQGD--GSVVATGGLDAFGRVWDLRTG--- 354 (471)
Q Consensus 282 ~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s~d--~~~l~t~~~dg~i~iwd~~~~--- 354 (471)
.|.+++|+|++.+|++++.|++|++||+.++ +++..+.+|...|.+++|+|+ +.+|++|+.|++|++||+..+
T Consensus 155 ~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 234 (330)
T 2hes_X 155 DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED 234 (330)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc
Confidence 8999999999999999999999999999876 577888999999999999998 779999999999999998764
Q ss_pred -----eeEEEecc-cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy11350 355 -----RCIMFLEG-HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396 (471)
Q Consensus 355 -----~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~ 396 (471)
.+...+.+ |...|.+++|++++ +|++++.||+|++||..++
T Consensus 235 ~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 235 DQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp SCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETT
T ss_pred ccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC
Confidence 44555655 89999999999765 7999999999999998765
No 15
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=303.07 Aligned_cols=243 Identities=19% Similarity=0.189 Sum_probs=207.5
Q ss_pred eecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEE----eecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcE
Q psy11350 148 QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT----FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223 (471)
Q Consensus 148 ~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~----~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 223 (471)
...|..+|.+++|+|++ .|++|+.||+|+|||+.+++.+.. +.+|...|++++|+|++. +|++|+.||+|
T Consensus 78 ~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-----~l~sgs~d~~i 151 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT-----QAVSGSKDICI 151 (344)
T ss_dssp EEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS-----EEEEEETTSCE
T ss_pred eeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC-----EEEEEeCCCeE
Confidence 34577899999999985 688999999999999998876543 448999999999999998 79999999999
Q ss_pred EEEeCCCCcceeeecCCCCcceEEEEECCCCC-EEEEEeCCCeEEeccc-----cccccC-CCCcceEEEEECCC-CCEE
Q psy11350 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLDTP-----LANLEG-HEPFRVSRIKFHPS-GRFL 295 (471)
Q Consensus 224 ~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~i~~~~~d~~~~~~~~-----~~~~~~-~~~~~v~~l~~~~~-~~~l 295 (471)
++||+.+++++..+.+|.. .|.+++|+|++. ++++++.|+.+++|.. ...+.. .....+.+++|+|+ +++|
T Consensus 152 ~iwd~~~~~~~~~~~~h~~-~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 230 (344)
T 4gqb_B 152 KVWDLAQQVVLSSYRAHAA-QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVF 230 (344)
T ss_dssp EEEETTTTEEEEEECCCSS-CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEE
T ss_pred EEEECCCCcEEEEEcCcCC-ceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcce
Confidence 9999999999999999887 899999999985 7889999999777643 222221 22446899999994 5688
Q ss_pred EEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCC-CEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcC
Q psy11350 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG-SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374 (471)
Q Consensus 296 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp 374 (471)
++|+.||+|++||+++++++..+.+|...|++++|+|++ ++|++|+.|++|+|||+.+++++ .+.+|.+.|++++|+|
T Consensus 231 ~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp 309 (344)
T 4gqb_B 231 VFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSP 309 (344)
T ss_dssp EEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECS
T ss_pred EEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeC
Confidence 999999999999999999999999999999999999997 58999999999999999998765 5789999999999999
Q ss_pred CCC-EEEEEeCCCcEEEEECCCccc
Q psy11350 375 DGY-HLATGSEDNAVKIWDLRKRRL 398 (471)
Q Consensus 375 ~~~-~l~s~s~dg~i~iwd~~~~~~ 398 (471)
++. +|++||.||+|++|++.+...
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCeEEEEEcCCCeEEEEECCCCCC
Confidence 875 677999999999999987543
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.7e-39 Score=310.99 Aligned_cols=246 Identities=15% Similarity=0.161 Sum_probs=201.9
Q ss_pred ecCCcCeEEEEEecCCCEEEEEeC------CCcEEEEeCCCCceE----EEeecCCCCEEEEEEeeCCCCCCccEEEEEe
Q psy11350 149 VGDTRPISYCSFSPDSQHVATASW------SGLCKLWTVPECELV----QTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~~l~tg~~------dg~i~iwd~~~~~~~----~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~ 218 (471)
.+|.+.|++++|||||++||+|+. |+.|++|+..++... ....+|...|.+++|+|++. +++++
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~------~l~~s 112 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG------ILVAS 112 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE------EEEEE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC------EEEEE
Confidence 369999999999999999999996 788999998776543 33457889999999999875 77889
Q ss_pred CCCcEEEEeCCCCcceee----ecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEEC
Q psy11350 219 QDGSVKLWSLDKDTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFH 289 (471)
Q Consensus 219 ~dg~i~iwd~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~ 289 (471)
.||+|+|||+.+++.... ..+|.. .|.+++|+|++++|++++.|+.+++|.. ...+.+| ...|.+++|+
T Consensus 113 ~dg~v~lWd~~~~~~~~~~~~~~~~h~~-~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h-~~~v~~v~~s 190 (357)
T 4g56_B 113 DSGAVELWEILEKESLLVNKFAKYEHDD-IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAH-SSEVNCVAAC 190 (357)
T ss_dssp TTSCEEEC--------CCCCEEECCCSS-CEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEC
T ss_pred CCCEEEEeeccccceeEEEeeccCCCCC-CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC-CCCEEEEEEc
Confidence 999999999988765433 224544 8999999999999999999999777543 3445666 5689999999
Q ss_pred CCCC-EEEEEecCCeEEEEECCCCcEEEEe--eCCCCCeEEEEEeCC-CCEEEEEeCCCeEEEEeCCCCeeEEEecccCc
Q psy11350 290 PSGR-FLGTCCWDHSWRLWDLNQGQEVLHQ--EGHGKPVYCMSFQGD-GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365 (471)
Q Consensus 290 ~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~s~d-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~ 365 (471)
|++. ++++++.||+|++||+++++++..+ ..|...+++++|+|+ +.+|++|+.|+.|++||+++++++..+.+|..
T Consensus 191 ~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~ 270 (357)
T 4g56_B 191 PGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQ 270 (357)
T ss_dssp TTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSS
T ss_pred cCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccce
Confidence 9875 7899999999999999998876654 356778999999996 56899999999999999999999999999999
Q ss_pred CEEEEEEcCCC-CEEEEEeCCCcEEEEECCCccchhee
Q psy11350 366 SVFSVDFSPDG-YHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 366 ~v~~~~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
.|++++|+|++ ++|++|+.||+|+|||+++++++..+
T Consensus 271 ~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 271 NITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred eEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence 99999999987 68999999999999999998876543
No 17
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=306.22 Aligned_cols=242 Identities=19% Similarity=0.260 Sum_probs=200.7
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCC-----------CCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEe
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVP-----------ECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~-----------~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~ 218 (471)
.|...|.+++|+|||++|++++ |+++++||.. ..........|...|.+++|+|++ .|++|+
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~------~l~~~s 100 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER------GILVAS 100 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT------EEEEEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC------eEEEEE
Confidence 5788899999999999999888 7777777631 111111222456789999999986 489999
Q ss_pred CCCcEEEEeCCCCcceeeec----CCCCcceEEEEECCCCCEEEEEeCCCeEEecc-----ccccccCCCCcceEEEEEC
Q psy11350 219 QDGSVKLWSLDKDTPLANLE----GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-----PLANLEGHEPFRVSRIKFH 289 (471)
Q Consensus 219 ~dg~i~iwd~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~-----~~~~~~~~~~~~v~~l~~~ 289 (471)
.||+|+|||+.+++.+..+. +|.. .|.+++|+|+|++|++++.|+.+++|. ....+.+| ...|.+++|+
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~-~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h-~~~V~~~~~~ 178 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDD-IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAH-AAQVTCVAAS 178 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEC
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCC-CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCc-CCceEEEEec
Confidence 99999999999988665433 5655 899999999999999999999977754 34456677 6689999999
Q ss_pred CCCC-EEEEEecCCeEEEEECCCCcEEEEee--CCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEeCCCCeeEEEecccCc
Q psy11350 290 PSGR-FLGTCCWDHSWRLWDLNQGQEVLHQE--GHGKPVYCMSFQG-DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365 (471)
Q Consensus 290 ~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~-d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~ 365 (471)
|++. +|++++.|++|++||++++++...+. .|...+.+++|+| ++.+|++|+.||.|+|||+++++++..+.+|..
T Consensus 179 ~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~ 258 (344)
T 4gqb_B 179 PHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ 258 (344)
T ss_dssp SSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSS
T ss_pred CCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCC
Confidence 9885 78999999999999999998887764 4567799999999 567899999999999999999999999999999
Q ss_pred CEEEEEEcCCC-CEEEEEeCCCcEEEEECCCccchh
Q psy11350 366 SVFSVDFSPDG-YHLATGSEDNAVKIWDLRKRRLLK 400 (471)
Q Consensus 366 ~v~~~~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~ 400 (471)
.|++++|+|++ ++|++|+.|++|+|||+.+++++.
T Consensus 259 ~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 259 CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR 294 (344)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE
T ss_pred CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE
Confidence 99999999997 589999999999999999887553
No 18
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=302.33 Aligned_cols=249 Identities=23% Similarity=0.429 Sum_probs=214.4
Q ss_pred cceeeeeecCCc-CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEE---EeecCCCCEEEEEEeeCCCCCCccEEEEE
Q psy11350 142 LSIYCSQVGDTR-PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ---TFRGHDCNVGAIEFHPLPSEGAVCSLASC 217 (471)
Q Consensus 142 ~~~~~~~~gh~~-~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~---~~~~h~~~v~~l~~~~~~~~~~~~~l~s~ 217 (471)
+.....+.+|.. .|.+++|+|+|++||+|+.|++|+|||+.++.... ...+|...|.+++|+|++. +|++|
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~-----~l~s~ 79 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN-----YLASA 79 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS-----EEEEE
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC-----EEEEE
Confidence 345667789988 99999999999999999999999999998876432 2358999999999999998 89999
Q ss_pred eCCCcEEEEeCCCCc--ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc--------cccccCCCCcceEEEE
Q psy11350 218 AQDGSVKLWSLDKDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP--------LANLEGHEPFRVSRIK 287 (471)
Q Consensus 218 ~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~--------~~~~~~~~~~~v~~l~ 287 (471)
+.|++|++|++.++. ++..+.+|.. .|.+++|+|++++|++++.|+.+.+|.. ...+..| ...|.+++
T Consensus 80 s~D~~v~iw~~~~~~~~~~~~~~~h~~-~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h-~~~v~~~~ 157 (345)
T 3fm0_A 80 SFDATTCIWKKNQDDFECVTTLEGHEN-EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSH-TQDVKHVV 157 (345)
T ss_dssp ETTSCEEEEEECCC-EEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCC-CSCEEEEE
T ss_pred ECCCcEEEEEccCCCeEEEEEccCCCC-CceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCc-CCCeEEEE
Confidence 999999999987764 5667788776 8999999999999999999999777543 2234555 56799999
Q ss_pred ECCCCCEEEEEecCCeEEEEECCCCc--EEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCC-----------
Q psy11350 288 FHPSGRFLGTCCWDHSWRLWDLNQGQ--EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG----------- 354 (471)
Q Consensus 288 ~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~----------- 354 (471)
|+|++++|++++.|++|++||+++++ +...+.+|...|++++|+|+|++|++|+.|++|+|||....
T Consensus 158 ~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~ 237 (345)
T 3fm0_A 158 WHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGS 237 (345)
T ss_dssp ECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC--
T ss_pred ECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeecc
Confidence 99999999999999999999998875 45678899999999999999999999999999999996321
Q ss_pred ----eeEEEecc-cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc
Q psy11350 355 ----RCIMFLEG-HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 355 ----~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~ 397 (471)
+++..+.+ |...|.+++|+|++..|++++.|+.|++|+...+.
T Consensus 238 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 238 DPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp -CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTS
T ss_pred CCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCC
Confidence 34555555 88899999999999999999999999999987653
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.1e-38 Score=294.47 Aligned_cols=243 Identities=21% Similarity=0.294 Sum_probs=208.4
Q ss_pred eeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCC--CceEEEeecCCCCEEEEEEeeC--CCCCCccEEEEEeCCC
Q psy11350 146 CSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE--CELVQTFRGHDCNVGAIEFHPL--PSEGAVCSLASCAQDG 221 (471)
Q Consensus 146 ~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~--~~~~~~~~~h~~~v~~l~~~~~--~~~~~~~~l~s~~~dg 221 (471)
..+.+|...|++++|+|+|++||+|+.|++|+|||+.+ ++.+.++.+|..+|.+++|+|. +. +|++|+.||
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~-----~l~s~s~D~ 77 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-----ILASCSYDG 77 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCS-----EEEEEETTT
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCC-----EEEEEcCCC
Confidence 35679999999999999999999999999999999974 4678899999999999999864 55 799999999
Q ss_pred cEEEEeCCCCc--ceeeecCCCCcceEEEEECCC--CCEEEEEeCCCeEEecccc-------ccccCCCCcceEEEEECC
Q psy11350 222 SVKLWSLDKDT--PLANLEGHEPFRVSRIKFHPS--GRFLGTCCWDHSWRLDTPL-------ANLEGHEPFRVSRIKFHP 290 (471)
Q Consensus 222 ~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~i~~~~~d~~~~~~~~~-------~~~~~~~~~~v~~l~~~~ 290 (471)
+|++||+.+++ .+..+..|.. .|.+++|+|+ +.++++++.|+.++++... ..+.+| ...|.+++|+|
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h-~~~v~~~~~~p 155 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAVHSA-SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH-AIGVNSASWAP 155 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECCCSS-CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC-SSCEEEEEECC
T ss_pred EEEEEEcCCCceEEEEEeecCCC-ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecc-cCccceEeecC
Confidence 99999998774 4556666665 8999999998 8999999999997775432 223455 55799999999
Q ss_pred C-------------CCEEEEEecCCeEEEEECCCCc----EEEEeeCCCCCeEEEEEeCCC---CEEEEEeCCCeEEEEe
Q psy11350 291 S-------------GRFLGTCCWDHSWRLWDLNQGQ----EVLHQEGHGKPVYCMSFQGDG---SVVATGGLDAFGRVWD 350 (471)
Q Consensus 291 ~-------------~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~d~---~~l~t~~~dg~i~iwd 350 (471)
+ +++|++|+.|++|++||+++++ ....+.+|...|.+++|+|++ .+|++++.|++|+|||
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd 235 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWT 235 (297)
T ss_dssp CC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred CcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEE
Confidence 7 5799999999999999998765 566788999999999999984 8999999999999999
Q ss_pred CCCCe---eEEEe--cccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 351 LRTGR---CIMFL--EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 351 ~~~~~---~~~~~--~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
++++. ....+ ..|...|.+++|+|+|++|++++.||+|+||+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred eCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 98743 22233 46888999999999999999999999999999863
No 20
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.4e-38 Score=304.26 Aligned_cols=251 Identities=25% Similarity=0.425 Sum_probs=218.0
Q ss_pred ecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCC------------------CEEEEEEeeCCCCCC
Q psy11350 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDC------------------NVGAIEFHPLPSEGA 210 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~------------------~v~~l~~~~~~~~~~ 210 (471)
.+|...|.+++|+|||++||+|+ ++.++||++.+++.+..+..|.. .|.+++|+|++.
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~--- 136 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK--- 136 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS---
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC---
Confidence 37999999999999999999987 78999999999998888765532 499999999998
Q ss_pred ccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccc---cccCCCCcceEEEE
Q psy11350 211 VCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA---NLEGHEPFRVSRIK 287 (471)
Q Consensus 211 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~---~~~~~~~~~v~~l~ 287 (471)
+|++|+.|++|++||+.+++.+..+.+|.. .|.+++|+|++.++++++.|+.+++|.... .........+.+++
T Consensus 137 --~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~ 213 (393)
T 1erj_A 137 --FLATGAEDRLIRIWDIENRKIVMILQGHEQ-DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVA 213 (393)
T ss_dssp --EEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred --EEEEEcCCCeEEEEECCCCcEEEEEccCCC-CEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEE
Confidence 799999999999999999999999998887 899999999999999999999977764321 11111244699999
Q ss_pred ECC-CCCEEEEEecCCeEEEEECCCCcEEEEe-------eCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCC-----
Q psy11350 288 FHP-SGRFLGTCCWDHSWRLWDLNQGQEVLHQ-------EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG----- 354 (471)
Q Consensus 288 ~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~----- 354 (471)
|+| ++++|++++.||+|++||+++++.+..+ .+|...|++++|+|++++|++|+.|+.|++||+++.
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 293 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 293 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 999 8999999999999999999999887766 579999999999999999999999999999999753
Q ss_pred -------eeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccC
Q psy11350 355 -------RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLL 406 (471)
Q Consensus 355 -------~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 406 (471)
.+...+.+|...|.+++|+|++.+|++|+.||.|++||+.+++++..+..+.
T Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~ 352 (393)
T 1erj_A 294 SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR 352 (393)
T ss_dssp -------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred ccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCC
Confidence 4566788999999999999999999999999999999999999887776543
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1e-37 Score=318.06 Aligned_cols=303 Identities=27% Similarity=0.444 Sum_probs=246.2
Q ss_pred eeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcE
Q psy11350 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 223 (471)
..+.+.||+++|++++|||||++||+|+.|+.|+|||. +++++.++.+|...|++++|+|++. +|++++.|++|
T Consensus 8 e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~-----~las~~~d~~i 81 (577)
T 2ymu_A 8 ERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQ-----TIASASDDKTV 81 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSS-----EEEEEETTSCE
T ss_pred EeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCC-----EEEEEeCCCEE
Confidence 34568899999999999999999999999999999995 7899999999999999999999998 89999999999
Q ss_pred EEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc-------------------------------
Q psy11350 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL------------------------------- 272 (471)
Q Consensus 224 ~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~------------------------------- 272 (471)
+|||+ +++.+..+.+|.. .|.+++|+|+++++++++.|+.+.++...
T Consensus 82 ~vWd~-~~~~~~~~~~~~~-~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 159 (577)
T 2ymu_A 82 KLWNR-NGQLLQTLTGHSS-SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASD 159 (577)
T ss_dssp EEEET-TSCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred EEEEC-CCCEEEEEECCCC-CEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceeccc
Confidence 99996 6788888888876 89999999999999999999885542110
Q ss_pred --------------ccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEE
Q psy11350 273 --------------ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVA 338 (471)
Q Consensus 273 --------------~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 338 (471)
..... ....|.++.|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|++.+|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~ 237 (577)
T 2ymu_A 160 DKTVKLWNRNGQLLQTLTG-HSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIA 237 (577)
T ss_dssp TSEEEEECTTSCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred ccceeccccceeeeeeccC-CCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEE
Confidence 00111 2346889999999999999999999999996 5678888999999999999999999999
Q ss_pred EEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccC---------CCc
Q psy11350 339 TGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLL---------PNS 409 (471)
Q Consensus 339 t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---------~~~ 409 (471)
+++.|+.|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||.. ++.+..+..+. +..
T Consensus 238 ~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~ 315 (577)
T 2ymu_A 238 SASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDG 315 (577)
T ss_dssp EEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTS
T ss_pred EEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCC
Confidence 9999999999995 567888999999999999999999999999999999999964 55555554332 222
Q ss_pred cceeeccccceeeeecccCCCcccccchhhhcccccce-eeecccceeeeecCCeEEEeecC
Q psy11350 410 IGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPIP-LLLDIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 410 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~fs~dg~~lA~~~~~ 470 (471)
..+++...|..+.+|...... +..+. ....+..++|+|+|++||+.+.+
T Consensus 316 ~~l~t~~~d~~i~~w~~~~~~------------~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 365 (577)
T 2ymu_A 316 QTIASASDDKTVKLWNRNGQH------------LQTLTGHSSSVWGVAFSPDGQTIASASDD 365 (577)
T ss_dssp SEEEEEETTSCEEEEETTSCE------------EEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEeCCCeEEEEeCCCCe------------eEEEeCCCCCEEEEEECCCCCEEEEEeCC
Confidence 233333444455555432211 11111 22356789999999999988764
No 22
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.9e-38 Score=296.85 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=223.6
Q ss_pred chhhhhhHHHHhhccccceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC----ceEEEeecCCCCEEEEE
Q psy11350 126 ATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC----ELVQTFRGHDCNVGAIE 201 (471)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~ 201 (471)
.++.++.|+... ......+.+|...|.+++|+|++++|++|+.|+.|++|++.++ .....+.+|...|.++.
T Consensus 75 ~Dg~v~iWd~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~ 150 (340)
T 1got_B 75 QDGKLIIWDSYT----TNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCR 150 (340)
T ss_dssp TTTEEEEEETTT----CCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEE
T ss_pred CCCcEEEEECCC----CCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEE
Confidence 344445554322 2334556789999999999999999999999999999999765 35667889999999999
Q ss_pred EeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----ccccc
Q psy11350 202 FHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLE 276 (471)
Q Consensus 202 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~ 276 (471)
|++++ .+++++.|++|++||+.+++.+..+.+|.. .|.+++|+|++.++++++.|+.+++|.. ...+.
T Consensus 151 ~~~~~------~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~ 223 (340)
T 1got_B 151 FLDDN------QIVTSSGDTTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223 (340)
T ss_dssp EEETT------EEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred ECCCC------cEEEEECCCcEEEEECCCCcEEEEEcCCCC-ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc
Confidence 99987 489999999999999999999999998877 8999999999999999999999777643 33456
Q ss_pred CCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeC--CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCC
Q psy11350 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG--HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354 (471)
Q Consensus 277 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~ 354 (471)
+| ...|.+++|+|++++|++++.||+|++||+++++.+..+.. +...|++++|+|+|++|++|+.||.|++||+.++
T Consensus 224 ~h-~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 224 GH-ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp CC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CC-cCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence 66 56899999999999999999999999999999887776643 3357999999999999999999999999999999
Q ss_pred eeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11350 355 RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392 (471)
Q Consensus 355 ~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd 392 (471)
+.+..+.+|...|.+++|+|+|.+|++|+.||+|+|||
T Consensus 303 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999999999999999999997
No 23
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.3e-37 Score=291.17 Aligned_cols=288 Identities=22% Similarity=0.379 Sum_probs=239.1
Q ss_pred cccceeeeeecCCcCeEEEEEecC-CCEEEEEeCCCcEEEEeCCCC-----ceEEEeecCCCCEEEEEEeeCCCCCCccE
Q psy11350 140 TSLSIYCSQVGDTRPISYCSFSPD-SQHVATASWSGLCKLWTVPEC-----ELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213 (471)
Q Consensus 140 ~~~~~~~~~~gh~~~V~~~~~s~~-~~~l~tg~~dg~i~iwd~~~~-----~~~~~~~~h~~~v~~l~~~~~~~~~~~~~ 213 (471)
..+.+..++.||+++|++++|+|+ +++||||+.||+|+|||+.+. .+...+.+|...|.+++|+|++. +
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~-----~ 100 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ-----F 100 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS-----E
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC-----E
Confidence 345566789999999999999998 689999999999999998764 35677889999999999999998 8
Q ss_pred EEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc------ccccCCCCcceEEEE
Q psy11350 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL------ANLEGHEPFRVSRIK 287 (471)
Q Consensus 214 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~------~~~~~~~~~~v~~l~ 287 (471)
|++++.|+.|++|+............+.. .+..+.+++++.++++++.|+.+.++... ....+| ...+..++
T Consensus 101 l~s~~~d~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~-~~~v~~~~ 178 (340)
T 4aow_A 101 ALSGSWDGTLRLWDLTTGTTTRRFVGHTK-DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESH-SEWVSCVR 178 (340)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSC-SSCEEEEE
T ss_pred EEEEcccccceEEeecccceeeeecCCCC-ceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccc-cCcccceE
Confidence 99999999999999988877777766665 78899999999999999999997775432 223344 55799999
Q ss_pred ECCCC--CEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCc
Q psy11350 288 FHPSG--RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365 (471)
Q Consensus 288 ~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~ 365 (471)
|++++ .++++++.|+.|++||+++++.+..+.+|..+|++++|+|++++|++|+.||.|++||+++++++..+..+ .
T Consensus 179 ~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~ 257 (340)
T 4aow_A 179 FSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-D 257 (340)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-S
T ss_pred EccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-c
Confidence 98865 57889999999999999999999999999999999999999999999999999999999999999888754 6
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccCCCccceeeccccceeeeecccCCCcccccchhhhccccc
Q psy11350 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEP 445 (471)
Q Consensus 366 ~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (471)
.|.+++|+|++.++ +++.|+.|++||++++..+..+....... ..
T Consensus 258 ~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~----------------------------------~~ 302 (340)
T 4aow_A 258 IINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVIST----------------------------------SS 302 (340)
T ss_dssp CEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC----------------------------------------
T ss_pred eEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceee----------------------------------ec
Confidence 89999999987654 56679999999999887766543211000 00
Q ss_pred ceeeecccceeeeecCCeEEEeecC
Q psy11350 446 IPLLLDIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 446 ~~~~~~~~~l~fs~dg~~lA~~~~~ 470 (471)
......+..|+|+|||++||+++.+
T Consensus 303 ~~h~~~v~~l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 303 KAEPPQCTSLAWSADGQTLFAGYTD 327 (340)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEETT
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCC
Confidence 0112346688999999999998865
No 24
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-37 Score=293.52 Aligned_cols=253 Identities=16% Similarity=0.208 Sum_probs=223.4
Q ss_pred cceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCC
Q psy11350 142 LSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221 (471)
Q Consensus 142 ~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg 221 (471)
......+.+|..+|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++. +|++++.||
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-----~l~s~~~dg 96 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTK-----YCVTGSADY 96 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-----EEEEEETTT
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCC-----EEEEEeCCC
Confidence 344566789999999999999999999999999999999999999999999999999999999987 799999999
Q ss_pred cEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCC-----CeEEeccc----------------cccccCCC-
Q psy11350 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD-----HSWRLDTP----------------LANLEGHE- 279 (471)
Q Consensus 222 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d-----~~~~~~~~----------------~~~~~~~~- 279 (471)
.|++||+.+++.+..+.. ...+.+++|+|++.++++++.+ +.+.++.. ...+..+.
T Consensus 97 ~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWKS--PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG 174 (369)
T ss_dssp EEEEEETTTCCEEEEEEC--SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred eEEEEECCCCcEEEEeec--CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence 999999999998888873 3389999999999999999998 77655322 11222221
Q ss_pred CcceEEEEECCCCCEEEEEecCCeEEEEECCC-CcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEE
Q psy11350 280 PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ-GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358 (471)
Q Consensus 280 ~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~ 358 (471)
...+.+++|+|++++|++++.||.|++||+++ ++.+..+..|...|.+++|+|++.+|++++.|+.|++||+++++.+.
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 175 LDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp CCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 12799999999999999999999999999998 78888899999999999999999999999999999999999999988
Q ss_pred EecccCcCEEEEEEcCCCCEEEEEeCCC--------------cEEEEECCCccchhee
Q psy11350 359 FLEGHLKSVFSVDFSPDGYHLATGSEDN--------------AVKIWDLRKRRLLKWC 402 (471)
Q Consensus 359 ~~~~h~~~v~~~~~sp~~~~l~s~s~dg--------------~i~iwd~~~~~~~~~~ 402 (471)
.+. +...+.+++|+|++.++++++.++ .+++||+.+++++..+
T Consensus 255 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 311 (369)
T 3zwl_B 255 KYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV 311 (369)
T ss_dssp EEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEE
T ss_pred eec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe
Confidence 887 778999999999999999999998 7888888777766544
No 25
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.5e-37 Score=322.25 Aligned_cols=254 Identities=24% Similarity=0.406 Sum_probs=225.2
Q ss_pred ccceeeeeecCCcCeEEEEEecCC-CEEEEEeCCCcEEEEeCCCC-----ceEEEeecCCCCEEEEEEeeCCCCCCccEE
Q psy11350 141 SLSIYCSQVGDTRPISYCSFSPDS-QHVATASWSGLCKLWTVPEC-----ELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214 (471)
Q Consensus 141 ~~~~~~~~~gh~~~V~~~~~s~~~-~~l~tg~~dg~i~iwd~~~~-----~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l 214 (471)
.+.....+.+|++.|++++|+|++ ++|++|+.||+|++|++.+. .....+.+|...|.+++|+|++. +|
T Consensus 371 ~l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~-----~l 445 (694)
T 3dm0_A 371 GLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ-----FA 445 (694)
T ss_dssp SSEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS-----EE
T ss_pred ccchhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC-----EE
Confidence 345566789999999999999875 78999999999999998753 45677889999999999999998 79
Q ss_pred EEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccccc--------ccCCCCcceEEE
Q psy11350 215 ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN--------LEGHEPFRVSRI 286 (471)
Q Consensus 215 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~--------~~~~~~~~v~~l 286 (471)
++|+.||+|+|||+.++.....+.+|.. .|.+++|+|++++|++++.|+.+++|..... ..+| ...|.++
T Consensus 446 ~sgs~Dg~v~vwd~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h-~~~v~~~ 523 (694)
T 3dm0_A 446 LSGSWDGELRLWDLAAGVSTRRFVGHTK-DVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGH-RDWVSCV 523 (694)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSC-SSCEEEE
T ss_pred EEEeCCCcEEEEECCCCcceeEEeCCCC-CEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCC-CCcEEEE
Confidence 9999999999999999999999998887 8999999999999999999999888754211 1234 5579999
Q ss_pred EECCCC--CEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccC
Q psy11350 287 KFHPSG--RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364 (471)
Q Consensus 287 ~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~ 364 (471)
+|+|++ ..|++++.|++|++||+++++....+.+|...|++++|+|++++|++|+.||.|++||+++++++..+.. .
T Consensus 524 ~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~ 602 (694)
T 3dm0_A 524 RFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-N 602 (694)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-S
T ss_pred EEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-C
Confidence 999987 5899999999999999999999999999999999999999999999999999999999999999888764 5
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 365 ~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
..|.+++|+|++.+|++++ ++.|++||+++++++..+.
T Consensus 603 ~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~ 640 (694)
T 3dm0_A 603 SVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLK 640 (694)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEC
T ss_pred CcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhc
Confidence 6899999999998887775 5669999999998887664
No 26
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.8e-37 Score=296.93 Aligned_cols=247 Identities=18% Similarity=0.181 Sum_probs=204.9
Q ss_pred eeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEE----EeecCCCCEEEEEEeeCCCCCCccEEEEEeCC
Q psy11350 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ----TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220 (471)
Q Consensus 145 ~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~----~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d 220 (471)
.....+|...|++++|+|++.+ ++++.||+|+|||+.+++... ...+|...|.+++|+|++. +|++|+.|
T Consensus 87 ~~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-----~l~sgs~d 160 (357)
T 4g56_B 87 CTAGVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGT-----QAVSGGKD 160 (357)
T ss_dssp CSEEEECSSCEEEEEEETTTEE-EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSS-----EEEEEETT
T ss_pred ecccCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCC-----EEEEEeCC
Confidence 3445689999999999999864 567779999999998876543 3447999999999999998 79999999
Q ss_pred CcEEEEeCCCCcceeeecCCCCcceEEEEECCCCC-EEEEEeCCCeEEecccc-----cccc-CCCCcceEEEEECCC-C
Q psy11350 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLDTPL-----ANLE-GHEPFRVSRIKFHPS-G 292 (471)
Q Consensus 221 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~i~~~~~d~~~~~~~~~-----~~~~-~~~~~~v~~l~~~~~-~ 292 (471)
|+|++||+.+++.+..+..|.. .|.+++|+|++. ++++++.|+.+++|... ..+. ......+.+++|+|+ +
T Consensus 161 g~v~iwd~~~~~~~~~~~~h~~-~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~ 239 (357)
T 4g56_B 161 FSVKVWDLSQKAVLKSYNAHSS-EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKD 239 (357)
T ss_dssp SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTST
T ss_pred CeEEEEECCCCcEEEEEcCCCC-CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhccc
Confidence 9999999999999999998877 899999999985 78999999998886432 1221 223457999999997 4
Q ss_pred CEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCC-CEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEE
Q psy11350 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG-SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371 (471)
Q Consensus 293 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 371 (471)
.+|++|+.|+.|++||+++++++..+.+|...|++++|+|++ .+|++|+.|++|+|||+++++++..+ +|.+.|++++
T Consensus 240 ~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~va 318 (357)
T 4g56_B 240 DTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVA 318 (357)
T ss_dssp TEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEE
T ss_pred ceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEE
Confidence 688999999999999999999999999999999999999987 58999999999999999999887665 7999999999
Q ss_pred EcC-CCCEEEEEeCCCcEEEEECCCccch
Q psy11350 372 FSP-DGYHLATGSEDNAVKIWDLRKRRLL 399 (471)
Q Consensus 372 ~sp-~~~~l~s~s~dg~i~iwd~~~~~~~ 399 (471)
|+| ++.+|+||+.||+|++||+.+....
T Consensus 319 fsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 319 WSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 999 7999999999999999999765433
No 27
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.5e-37 Score=326.92 Aligned_cols=257 Identities=21% Similarity=0.338 Sum_probs=234.2
Q ss_pred cceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCC
Q psy11350 142 LSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221 (471)
Q Consensus 142 ~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg 221 (471)
+.....+.+|+..|++++|+|++++||+|+.||.|+|||+.+++.+..+.+|..+|.+++|+|++. +|++++.||
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-----~l~~~~~dg 77 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKN-----WIIVGSDDF 77 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT-----EEEEEETTS
T ss_pred cccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCC-----EEEEEeCCC
Confidence 345567889999999999999999999999999999999999999999999999999999999998 799999999
Q ss_pred cEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc------cccccCCCCcceEEEEECC-CCCE
Q psy11350 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP------LANLEGHEPFRVSRIKFHP-SGRF 294 (471)
Q Consensus 222 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~------~~~~~~~~~~~v~~l~~~~-~~~~ 294 (471)
.|++||+.+++.+..+..|.. .|.+++|+|+++++++++.|+.+.+|.. ...+.+| ...|.+++|+| ++..
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPD-YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGH-EHFVMCVAFNPKDPST 155 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSS-CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECC-SSCEEEEEEETTEEEE
T ss_pred eEEEEECCCCcEEEEEecCCC-CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCC-CCcEEEEEEEcCCCCE
Confidence 999999999999999988876 8999999999999999999999777542 2234455 56899999999 8899
Q ss_pred EEEEecCCeEEEEECCCCcEEEEeeCCC-CCeEEEEEeC--CCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEE
Q psy11350 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHG-KPVYCMSFQG--DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371 (471)
Q Consensus 295 l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~--d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 371 (471)
|++++.||+|++||+.++.....+..+. ..+.+++|+| ++.+|++++.||.|++||+.+++++..+.+|...|.+++
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~ 235 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAV 235 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 9999999999999999888777776655 8999999999 999999999999999999999999999999999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCccchheeccc
Q psy11350 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 372 ~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 405 (471)
|+|++.+|++++.||.|++||+.+++.+..+..+
T Consensus 236 ~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 269 (814)
T 3mkq_A 236 FHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (814)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTCSEEEEECCS
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC
Confidence 9999999999999999999999999888776544
No 28
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=294.71 Aligned_cols=248 Identities=27% Similarity=0.462 Sum_probs=207.6
Q ss_pred eecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC--ceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEE
Q psy11350 148 QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC--ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL 225 (471)
Q Consensus 148 ~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 225 (471)
..+|...|.+++|+|+|++|++|+.|+.|+||++.++ +.+..+.+|...|.+++|+|++. +|++|+.|++|++
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-----~l~s~s~D~~v~i 131 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-----LLATCSRDKSVWV 131 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSS-----EEEEEETTSCEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCC-----EEEEEECCCeEEE
Confidence 4689999999999999999999999999999998766 45778899999999999999988 8999999999999
Q ss_pred EeCCCCc---ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-------cccccCCCCcceEEEEECCCCCEE
Q psy11350 226 WSLDKDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-------LANLEGHEPFRVSRIKFHPSGRFL 295 (471)
Q Consensus 226 wd~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-------~~~~~~~~~~~v~~l~~~~~~~~l 295 (471)
||+.++. ++..+..|.. .|.+++|+|++.+|++++.|+.+.++.. ...+.+| ...|.+++|+|++++|
T Consensus 132 wd~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h-~~~v~~l~~sp~g~~l 209 (345)
T 3fm0_A 132 WEVDEEDEYECVSVLNSHTQ-DVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGH-ESTVWSLAFDPSGQRL 209 (345)
T ss_dssp EEECTTSCEEEEEEECCCCS-CEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECTTSSEE
T ss_pred EECCCCCCeEEEEEecCcCC-CeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC-CCceEEEEECCCCCEE
Confidence 9998764 3455666665 8999999999999999999999777532 2345666 5689999999999999
Q ss_pred EEEecCCeEEEEECCCC---------------cEEEEeeC-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCe----
Q psy11350 296 GTCCWDHSWRLWDLNQG---------------QEVLHQEG-HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR---- 355 (471)
Q Consensus 296 ~~~~~dg~i~iwd~~~~---------------~~~~~~~~-~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~---- 355 (471)
++++.|++|++||.... +++..+.+ |...|++++|+|++..|++++.|+.|++|+...+.
T Consensus 210 ~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~ 289 (345)
T 3fm0_A 210 ASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQ 289 (345)
T ss_dssp EEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTS
T ss_pred EEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcce
Confidence 99999999999996321 23444554 88999999999999999999999999999987542
Q ss_pred -----eEEEecccCcCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCccchhee
Q psy11350 356 -----CIMFLEGHLKSVFSVDFSPDG-YHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 356 -----~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
......+|...|++++|+|++ .+|++|+.||+|++|++.+++.+...
T Consensus 290 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 290 PTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp CCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred eeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 122346899999999999987 59999999999999999998876543
No 29
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.5e-36 Score=309.58 Aligned_cols=303 Identities=28% Similarity=0.480 Sum_probs=252.0
Q ss_pred eeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcE
Q psy11350 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 223 (471)
....+.+|..+|.+++|+|++++|++++.|+.|++|+. +++....+.+|...|.+++|+|++. .|++++.||+|
T Consensus 254 ~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~-----~l~t~~~d~~i 327 (577)
T 2ymu_A 254 LLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQ-----TIASASDDKTV 327 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSS-----EEEEEETTSCE
T ss_pred EEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCC-----EEEEEeCCCeE
Confidence 44567799999999999999999999999999999996 5678888999999999999999988 79999999999
Q ss_pred EEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc----cccccCCCCcceEEEEECCCCCEEEEEe
Q psy11350 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP----LANLEGHEPFRVSRIKFHPSGRFLGTCC 299 (471)
Q Consensus 224 ~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~~~~ 299 (471)
++||+. +..+..+..+.. .+.+++|+|+++++++++.++.+.++.. ...+..| ...|.+++|+|++++|++++
T Consensus 328 ~~w~~~-~~~~~~~~~~~~-~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~-~~~v~~~~~s~dg~~l~~~~ 404 (577)
T 2ymu_A 328 KLWNRN-GQHLQTLTGHSS-SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH-SSSVRGVAFSPDGQTIASAS 404 (577)
T ss_dssp EEEETT-SCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECC-SSCEEEEEECTTSSCEEEEE
T ss_pred EEEeCC-CCeeEEEeCCCC-CEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCC-CCCeEEEEECCCCCEEEEEe
Confidence 999975 455666776665 8999999999999999999999877643 3344555 56899999999999999999
Q ss_pred cCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEE
Q psy11350 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379 (471)
Q Consensus 300 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 379 (471)
.|+.|++||. +++.+..+.+|...|++++|+||+++|++++.|+.|++||. +++.+..+.+|...|++++|+|++++|
T Consensus 405 ~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~l 482 (577)
T 2ymu_A 405 DDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI 482 (577)
T ss_dssp TTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEE
T ss_pred CCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 9999999995 56788889999999999999999999999999999999996 677888999999999999999999999
Q ss_pred EEEeCCCcEEEEECCCccchheecccC---------CCccceeeccccceeeeecccCCCcccccchhhhcccccce-ee
Q psy11350 380 ATGSEDNAVKIWDLRKRRLLKWCTQLL---------PNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPIP-LL 449 (471)
Q Consensus 380 ~s~s~dg~i~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 449 (471)
++++.|++|++||. ++++++.+..+. +....+++...|..+.+|+... ..+..+. ..
T Consensus 483 as~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~------------~~~~~~~~h~ 549 (577)
T 2ymu_A 483 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG------------QLLQTLTGHS 549 (577)
T ss_dssp EEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS------------CEEEEEECCS
T ss_pred EEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC------------CEEEEEcCCC
Confidence 99999999999995 577777665432 2233344445555555555211 1122222 23
Q ss_pred ecccceeeeecCCeEEEeecC
Q psy11350 450 LDIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 450 ~~~~~l~fs~dg~~lA~~~~~ 470 (471)
..+..++|+|||++|+.++.+
T Consensus 550 ~~v~~~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 550 SSVWGVAFSPDGQTIASASSD 570 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETT
T ss_pred CCEEEEEEcCCCCEEEEEeCC
Confidence 357889999999999998865
No 30
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.3e-38 Score=296.97 Aligned_cols=242 Identities=21% Similarity=0.285 Sum_probs=202.6
Q ss_pred eeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc--eEEEeecCCCCEEEEEEeeC--CCCCCccEEEEEeCCCc
Q psy11350 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE--LVQTFRGHDCNVGAIEFHPL--PSEGAVCSLASCAQDGS 222 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~~~~~~l~s~~~dg~ 222 (471)
.+.+|..+|++++|+|+|++||+|+.|++|+|||+.++. .+..+.+|...|.+++|+|. +. +|++|+.|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~-----~l~s~s~D~~ 82 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGN-----ILASCSYDRK 82 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSS-----CEEEEETTSC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCC-----EEEEEECCCE
Confidence 456899999999999999999999999999999998764 46788999999999999863 55 6999999999
Q ss_pred EEEEeCCCCc--ceeeecCCCCcceEEEEECCC--CCEEEEEeCCCeEEeccc--------cccccCCCCcceEEEEECC
Q psy11350 223 VKLWSLDKDT--PLANLEGHEPFRVSRIKFHPS--GRFLGTCCWDHSWRLDTP--------LANLEGHEPFRVSRIKFHP 290 (471)
Q Consensus 223 i~iwd~~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~i~~~~~d~~~~~~~~--------~~~~~~~~~~~v~~l~~~~ 290 (471)
|++||+.++. ....+.+|.. .|.+++|+|+ +.++++++.|+.++++.. ...+.+| ...|.+++|+|
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~-~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h-~~~v~~~~~~~ 160 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDS-SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAH-TIGCNAVSWAP 160 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSS-CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSS-SSCBCCCEECC
T ss_pred EEEEECCCCcceEEEEccCCCC-ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccc-cCCcceEEEcc
Confidence 9999998774 4556667766 8999999998 889999999999777542 2233455 55799999999
Q ss_pred C-----------------CCEEEEEecCCeEEEEECCCC---cEEEEeeCCCCCeEEEEEeCCC----CEEEEEeCCCeE
Q psy11350 291 S-----------------GRFLGTCCWDHSWRLWDLNQG---QEVLHQEGHGKPVYCMSFQGDG----SVVATGGLDAFG 346 (471)
Q Consensus 291 ~-----------------~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~s~d~----~~l~t~~~dg~i 346 (471)
+ +++|++|+.|++|++||++.. +++..+.+|...|.+++|+|++ .+|++|+.|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v 240 (316)
T 3bg1_A 161 AVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240 (316)
T ss_dssp CCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEE
T ss_pred ccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeE
Confidence 7 478999999999999999765 4667788999999999999986 899999999999
Q ss_pred EEEeCCCC---e-eEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 347 RVWDLRTG---R-CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 347 ~iwd~~~~---~-~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
+|||+.+. . ....+..|...|.+++|+|++++|++|+.||+|++|+...
T Consensus 241 ~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 241 FIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 99998763 1 2234567889999999999999999999999999999863
No 31
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.6e-37 Score=297.63 Aligned_cols=238 Identities=25% Similarity=0.445 Sum_probs=212.0
Q ss_pred CCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC
Q psy11350 151 DTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK 230 (471)
Q Consensus 151 h~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 230 (471)
+...|.+++|+|+|++|++|+.||.|+|||+.+++.+..+.+|...|.+++|+|++. +|++++.|++|++||+.+
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~-----~l~s~s~d~~v~iwd~~~ 196 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD-----KLVSGSGDRTVRIWDLRT 196 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-----EEEEEETTSEEEEEETTT
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCC-----EEEEecCCCcEEEEECCC
Confidence 455699999999999999999999999999999999999999999999999999998 799999999999999999
Q ss_pred CcceeeecCCCCcceEEEEECC-CCCEEEEEeCCCeEEecccc-----ccc-------cCCCCcceEEEEECCCCCEEEE
Q psy11350 231 DTPLANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLDTPL-----ANL-------EGHEPFRVSRIKFHPSGRFLGT 297 (471)
Q Consensus 231 ~~~~~~~~~~~~~~v~~~~~s~-~~~~i~~~~~d~~~~~~~~~-----~~~-------~~~~~~~v~~l~~~~~~~~l~~ 297 (471)
+++...+..+. .+.+++|+| ++.++++++.|+.++++... ..+ .+| ...|.+++|+|++++|++
T Consensus 197 ~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~~~g~~l~s 273 (393)
T 1erj_A 197 GQCSLTLSIED--GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH-KDSVYSVVFTRDGQSVVS 273 (393)
T ss_dssp TEEEEEEECSS--CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCC-SSCEEEEEECTTSSEEEE
T ss_pred CeeEEEEEcCC--CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCC-CCCEEEEEECCCCCEEEE
Confidence 98877776544 799999999 89999999999998776432 112 344 568999999999999999
Q ss_pred EecCCeEEEEECCCC------------cEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCc
Q psy11350 298 CCWDHSWRLWDLNQG------------QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365 (471)
Q Consensus 298 ~~~dg~i~iwd~~~~------------~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~ 365 (471)
++.|++|++||+++. .+...+.+|...|.+++|+|++.+|++|+.|+.|++||+.+++++..+.+|..
T Consensus 274 ~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~ 353 (393)
T 1erj_A 274 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN 353 (393)
T ss_dssp EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC
Confidence 999999999999753 34567789999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEcC------CCCEEEEEeCCCcEEEEECCCc
Q psy11350 366 SVFSVDFSP------DGYHLATGSEDNAVKIWDLRKR 396 (471)
Q Consensus 366 ~v~~~~~sp------~~~~l~s~s~dg~i~iwd~~~~ 396 (471)
.|.+++|+| ++.+|++|+.||+|+||++...
T Consensus 354 ~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 354 SVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 999999986 6789999999999999998654
No 32
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.6e-37 Score=297.15 Aligned_cols=253 Identities=13% Similarity=0.160 Sum_probs=223.5
Q ss_pred ceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc------eEEEeecCCCCEEEEEEeeC----C---CCC
Q psy11350 143 SIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE------LVQTFRGHDCNVGAIEFHPL----P---SEG 209 (471)
Q Consensus 143 ~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~------~~~~~~~h~~~v~~l~~~~~----~---~~~ 209 (471)
.....+.+|..+|++++|+| ++|++|+.||.|++|++.+++ .+..+.+|...|.+++|+|+ + .
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~-- 82 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC-- 82 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE--
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcccc--
Confidence 34556779999999999999 899999999999999999887 78889999999999999999 7 6
Q ss_pred CccEEEEEeCCCcEEEEeCCCCcc-----eeeecCCC----CcceEEEEEC----CCCCE-EEEEeCCCeEEeccccc--
Q psy11350 210 AVCSLASCAQDGSVKLWSLDKDTP-----LANLEGHE----PFRVSRIKFH----PSGRF-LGTCCWDHSWRLDTPLA-- 273 (471)
Q Consensus 210 ~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~----~~~v~~~~~s----~~~~~-i~~~~~d~~~~~~~~~~-- 273 (471)
+|++++.||.|++||+.+++. ...+..+. ...|.+++|+ |++.+ +++++.|+.+.++....
T Consensus 83 ---~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 159 (397)
T 1sq9_A 83 ---LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFA 159 (397)
T ss_dssp ---EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSS
T ss_pred ---EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccc
Confidence 799999999999999998887 78888774 3489999999 99999 99999999866643322
Q ss_pred --------------ccc------CCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeC---C---CCCeEE
Q psy11350 274 --------------NLE------GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG---H---GKPVYC 327 (471)
Q Consensus 274 --------------~~~------~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~---~~~v~~ 327 (471)
.+. ..+...|.+++|+|++ +|++++.||.|++||+++++.+..+.. | ..+|.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~ 238 (397)
T 1sq9_A 160 DESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRS 238 (397)
T ss_dssp SHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEE
T ss_pred cccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccce
Confidence 332 2235679999999999 999999999999999999999999998 9 999999
Q ss_pred EEEeCCCCEEEEEeCC---CeEEEEeCCCCeeEEEecc-------------cCcCEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy11350 328 MSFQGDGSVVATGGLD---AFGRVWDLRTGRCIMFLEG-------------HLKSVFSVDFSPDGYHLATGSEDNAVKIW 391 (471)
Q Consensus 328 ~~~s~d~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~-------------h~~~v~~~~~sp~~~~l~s~s~dg~i~iw 391 (471)
++|+|++.+|++++.| |.|++||+++++++..+.+ |...|.+++|+|++++|++++.||.|++|
T Consensus 239 i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 318 (397)
T 1sq9_A 239 VKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW 318 (397)
T ss_dssp EEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred EEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 9999999999999999 9999999999999999998 99999999999999999999999999999
Q ss_pred ECCCccchheec
Q psy11350 392 DLRKRRLLKWCT 403 (471)
Q Consensus 392 d~~~~~~~~~~~ 403 (471)
|+++++++..+.
T Consensus 319 d~~~~~~~~~~~ 330 (397)
T 1sq9_A 319 DVKTKERITTLN 330 (397)
T ss_dssp ETTTTEEEEEEE
T ss_pred EcCCCceeEEEe
Confidence 999998877665
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.4e-36 Score=286.20 Aligned_cols=242 Identities=22% Similarity=0.383 Sum_probs=213.8
Q ss_pred eeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEE
Q psy11350 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 145 ~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 224 (471)
...+.+|...|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++. +|++|+.|++|+
T Consensus 58 ~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-----~l~s~s~D~~i~ 132 (319)
T 3frx_A 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS-----MIISGSRDKTIK 132 (319)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSC-----EEEEEETTSCEE
T ss_pred ceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCC-----EEEEEeCCCeEE
Confidence 456789999999999999999999999999999999999999999999999999999999988 799999999999
Q ss_pred EEeCCCCcceeeecCCCCcceEEEEECCC------CCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCCC
Q psy11350 225 LWSLDKDTPLANLEGHEPFRVSRIKFHPS------GRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGR 293 (471)
Q Consensus 225 iwd~~~~~~~~~~~~~~~~~v~~~~~s~~------~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~ 293 (471)
+||+. +.++..+.+|.. .+.++.|+|. +..+++++.|+.+++|.. ...+.+| ...|.+++|+|+++
T Consensus 133 vwd~~-~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~sp~g~ 209 (319)
T 3frx_A 133 VWTIK-GQCLATLLGHND-WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGH-NSNINTLTASPDGT 209 (319)
T ss_dssp EEETT-SCEEEEECCCSS-CEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCC-CSCEEEEEECTTSS
T ss_pred EEECC-CCeEEEEeccCC-cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCC-CCcEEEEEEcCCCC
Confidence 99985 567777877776 8999999995 458999999999777643 2345566 56899999999999
Q ss_pred EEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec--------ccCc
Q psy11350 294 FLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE--------GHLK 365 (471)
Q Consensus 294 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~--------~h~~ 365 (471)
+|++++.||+|++||+.+++.+..+.. ..+|.+++|+|++.+|++++. +.+++|++..+..+..+. .|..
T Consensus 210 ~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (319)
T 3frx_A 210 LIASAGKDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEP 287 (319)
T ss_dssp EEEEEETTCEEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCc
Confidence 999999999999999999998888875 468999999999999988875 459999999887766654 3456
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy11350 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396 (471)
Q Consensus 366 ~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~ 396 (471)
.+.+++|+|+|++|++|+.||.|+|||+.++
T Consensus 288 ~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 288 HAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred ceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 7999999999999999999999999998764
No 34
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-36 Score=284.25 Aligned_cols=245 Identities=20% Similarity=0.294 Sum_probs=216.4
Q ss_pred eeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcE
Q psy11350 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 223 (471)
....+.+|..+|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++. +|++|+.||+|
T Consensus 47 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-----~l~sgs~D~~v 121 (304)
T 2ynn_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP-----YVLSGSDDLTV 121 (304)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS-----EEEEEETTSCE
T ss_pred eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCC-----EEEEECCCCeE
Confidence 3456778999999999999999999999999999999999999999999999999999999998 79999999999
Q ss_pred EEEeCCCCc-ceeeecCCCCcceEEEEECC-CCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECC--CCCE
Q psy11350 224 KLWSLDKDT-PLANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHP--SGRF 294 (471)
Q Consensus 224 ~iwd~~~~~-~~~~~~~~~~~~v~~~~~s~-~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~--~~~~ 294 (471)
++||+.++. ....+.+|.. .|.+++|+| ++..+++++.|+.+++|.. ...+..+....+..+.|+| ++.+
T Consensus 122 ~lWd~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 200 (304)
T 2ynn_A 122 KLWNWENNWALEQTFEGHEH-FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY 200 (304)
T ss_dssp EEEEGGGTTEEEEEECCCCS-CEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCE
T ss_pred EEEECCCCcchhhhhcccCC-cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCE
Confidence 999998774 4456777766 899999999 6789999999999887653 2233334455789999987 7789
Q ss_pred EEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcC
Q psy11350 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374 (471)
Q Consensus 295 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp 374 (471)
|++++.|++|++||+++++++..+.+|...|.+++|+|++.+|++|+.||+|++||+.+++++..+..|...+.+++|+|
T Consensus 201 l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~ 280 (304)
T 2ynn_A 201 MITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280 (304)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECT
T ss_pred EEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC--EEEEEeCCCcEEEEECCC
Q psy11350 375 DGY--HLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 375 ~~~--~l~s~s~dg~i~iwd~~~ 395 (471)
++. ++++|+.|| +.+|++.+
T Consensus 281 ~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 281 TGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp TCGGGCEEEEETTE-EEEEECC-
T ss_pred CCCceEEEEecCCc-eEEEEecc
Confidence 875 577776554 67888764
No 35
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-37 Score=293.73 Aligned_cols=248 Identities=21% Similarity=0.288 Sum_probs=214.0
Q ss_pred eeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCC--CCceEEEeecCCCCEEEEEEeeC--CCCCCccEEEEEeCCC
Q psy11350 146 CSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVP--ECELVQTFRGHDCNVGAIEFHPL--PSEGAVCSLASCAQDG 221 (471)
Q Consensus 146 ~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~l~~~~~--~~~~~~~~l~s~~~dg 221 (471)
..+.+|..+|++++|+|++++||+|+.||.|+|||+. +++.+..+.+|...|++++|+|+ +. +|++++.||
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-----~l~s~~~dg 79 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-----ILASCSYDG 79 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS-----EEEEEETTS
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCC-----EEEEeccCC
Confidence 4577999999999999999999999999999999997 66778889999999999999977 65 799999999
Q ss_pred cEEEEeCCCCc--ceeeecCCCCcceEEEEECCC--CCEEEEEeCCCeEEeccccc-------cccCCCCcceEEEEECC
Q psy11350 222 SVKLWSLDKDT--PLANLEGHEPFRVSRIKFHPS--GRFLGTCCWDHSWRLDTPLA-------NLEGHEPFRVSRIKFHP 290 (471)
Q Consensus 222 ~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~i~~~~~d~~~~~~~~~~-------~~~~~~~~~v~~l~~~~ 290 (471)
.|++||+.+++ .+..+..+.. .|.+++|+|+ +.++++++.|+.+.++.... .+..| ...|.+++|+|
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~-~~~v~~~~~~~ 157 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSA-SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH-AIGVNSASWAP 157 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSS-CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC-TTCEEEEEECC
T ss_pred EEEEEEcCCCceeEeeeecCCCc-ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC-CCceEEEEEcC
Confidence 99999999887 6666766665 8999999999 99999999999977754321 23344 56899999999
Q ss_pred -------------CCCEEEEEecCCeEEEEECCCCc----EEEEeeCCCCCeEEEEEeCC---CCEEEEEeCCCeEEEEe
Q psy11350 291 -------------SGRFLGTCCWDHSWRLWDLNQGQ----EVLHQEGHGKPVYCMSFQGD---GSVVATGGLDAFGRVWD 350 (471)
Q Consensus 291 -------------~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~d---~~~l~t~~~dg~i~iwd 350 (471)
++.+|++++.||.|++||++++. ....+.+|..+|.+++|+|+ +.+|++++.||.|++||
T Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp CC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred ccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 69999999999999999998764 44667889999999999999 89999999999999999
Q ss_pred CCCCe-----eEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchh
Q psy11350 351 LRTGR-----CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400 (471)
Q Consensus 351 ~~~~~-----~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 400 (471)
++++. .+.....|...|.+++|+|++++|++++.||.|++|++.......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~ 292 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWE 292 (379)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEE
T ss_pred CCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCccc
Confidence 99863 222233488899999999999999999999999999998654433
No 36
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.6e-36 Score=281.12 Aligned_cols=245 Identities=26% Similarity=0.480 Sum_probs=219.4
Q ss_pred eeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcE
Q psy11350 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 223 (471)
....+.+|..+|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++. +|++|+.||.|
T Consensus 57 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~s~~~d~~i 131 (312)
T 4ery_A 57 FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-----LIVSGSFDESV 131 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS-----EEEEEETTSCE
T ss_pred cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC-----EEEEEeCCCcE
Confidence 3456679999999999999999999999999999999999999999999999999999999988 79999999999
Q ss_pred EEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc-----ccccCCCCcceEEEEECCCCCEEEEE
Q psy11350 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL-----ANLEGHEPFRVSRIKFHPSGRFLGTC 298 (471)
Q Consensus 224 ~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~-----~~~~~~~~~~v~~l~~~~~~~~l~~~ 298 (471)
++||+.+++.+..+..|.. .|.+++|+|++.++++++.|+.+.++... ..+..+....+..++|+|++++|+++
T Consensus 132 ~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 210 (312)
T 4ery_A 132 RIWDVKTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 210 (312)
T ss_dssp EEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCEEEEEecCCCC-cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEE
Confidence 9999999999999888876 89999999999999999999997775432 23333445579999999999999999
Q ss_pred ecCCeEEEEECCCCcEEEEeeCCCCCeEE--EEEe-CCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCC
Q psy11350 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYC--MSFQ-GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD 375 (471)
Q Consensus 299 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~--~~~s-~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 375 (471)
+.||.|++||+++++.+..+.+|...+.+ ..++ +++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|+
T Consensus 211 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~ 290 (312)
T 4ery_A 211 TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT 290 (312)
T ss_dssp ETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSS
T ss_pred cCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCc
Confidence 99999999999999999999888765432 2344 67899999999999999999999999999999999999999999
Q ss_pred CCEEEEEe--CCCcEEEEECC
Q psy11350 376 GYHLATGS--EDNAVKIWDLR 394 (471)
Q Consensus 376 ~~~l~s~s--~dg~i~iwd~~ 394 (471)
+.+|++++ .|++|++|+.+
T Consensus 291 ~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 291 ENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSEEEEEECTTTCCEEEEECC
T ss_pred CCceEEEEccCCccEEEecCC
Confidence 99999997 69999999975
No 37
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-36 Score=287.46 Aligned_cols=238 Identities=24% Similarity=0.385 Sum_probs=195.1
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCC-------CceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCc
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE-------CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGS 222 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 222 (471)
+|..+|.+++|+|++++|++|+.|++|+|||+.. .+.+..+.+|...|.+++|+|++. +|++|+.|++
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-----~las~s~D~~ 130 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY-----YLATCSRDKS 130 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC-----EEEEEETTSC
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC-----EEEEEeCCCE
Confidence 3999999999999999999999999999999843 456778889999999999999988 8999999999
Q ss_pred EEEEeCCCC----cceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecc-------ccccccCCCCcceEEEEECCC
Q psy11350 223 VKLWSLDKD----TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-------PLANLEGHEPFRVSRIKFHPS 291 (471)
Q Consensus 223 i~iwd~~~~----~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~-------~~~~~~~~~~~~v~~l~~~~~ 291 (471)
|++||+... +++..+..|.. .|.+++|+|++.+|++++.|+.+++|. ....+.+| ...|.+++|+|+
T Consensus 131 v~iwd~~~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h-~~~v~~~~~~~~ 208 (330)
T 2hes_X 131 VWIWETDESGEEYECISVLQEHSQ-DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGH-EGTVWSSDFDKT 208 (330)
T ss_dssp EEEEECCTTCCCCEEEEEECCCSS-CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCS
T ss_pred EEEEeccCCCCCeEEEEEeccCCC-ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCC-CCcEEEEEecCC
Confidence 999999432 35566777776 899999999999999999999987763 23456667 568999999998
Q ss_pred --CCEEEEEecCCeEEEEECCCC--------cEEEEeeC-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCe--eEE
Q psy11350 292 --GRFLGTCCWDHSWRLWDLNQG--------QEVLHQEG-HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR--CIM 358 (471)
Q Consensus 292 --~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~-~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~--~~~ 358 (471)
+.+|++++.|++|++||+..+ .+...+.+ |...|++++|++++ +|++++.||.|+|||..++. .+.
T Consensus 209 ~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 209 EGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFA 287 (330)
T ss_dssp SSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEE
T ss_pred CCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEe
Confidence 678999999999999998754 33444554 89999999999765 88999999999999998874 333
Q ss_pred E-ecccCc-CEEEEEEcC--CCCEEEEEeCCCcEEEEECCC
Q psy11350 359 F-LEGHLK-SVFSVDFSP--DGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 359 ~-~~~h~~-~v~~~~~sp--~~~~l~s~s~dg~i~iwd~~~ 395 (471)
. +.+|.. .|.+++|+| ++++|++|+.||+|+|||+..
T Consensus 288 ~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 288 KRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 3 457877 899999999 789999999999999999865
No 38
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4e-36 Score=287.26 Aligned_cols=242 Identities=21% Similarity=0.342 Sum_probs=216.2
Q ss_pred eeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC------ceEEEeecCCCCEEEEEEeeCCCCCCccEEEEE
Q psy11350 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC------ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~------~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~ 217 (471)
....+..|...|.+++|+|+|.+|++|+.|+.+++|++... .....+.+|...|.+++|+|++. .|+++
T Consensus 98 ~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-----~l~t~ 172 (354)
T 2pbi_B 98 KEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDM-----QILTA 172 (354)
T ss_dssp EEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSS-----EEEEE
T ss_pred cceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCC-----EEEEE
Confidence 34456679999999999999999999999999999998643 34567788999999999999987 79999
Q ss_pred eCCCcEEEEeCCCCcceeeecCCCCcceEEEEECC--CCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECC
Q psy11350 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHP--SGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHP 290 (471)
Q Consensus 218 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~ 290 (471)
+.|++|++||+.+++++..+.+|.. .|.++.|+| ++.++++++.|+.+.+|.. ...+..| ...|.+++|+|
T Consensus 173 s~D~~v~lwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h-~~~v~~v~~~p 250 (354)
T 2pbi_B 173 SGDGTCALWDVESGQLLQSFHGHGA-DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETH-ESDVNSVRYYP 250 (354)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECT
T ss_pred eCCCcEEEEeCCCCeEEEEEcCCCC-CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CCCeEEEEEeC
Confidence 9999999999999999999998876 899999987 5789999999999777643 3345566 56899999999
Q ss_pred CCCEEEEEecCCeEEEEECCCCcEEEEeeCC--CCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEE
Q psy11350 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH--GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVF 368 (471)
Q Consensus 291 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 368 (471)
++.+|++++.|++|++||+++++.+..+..+ ...+.+++|+|++.+|++|+.|+.|++||+.+++++..+.+|...|+
T Consensus 251 ~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~ 330 (354)
T 2pbi_B 251 SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVS 330 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEE
Confidence 9999999999999999999998877666543 35789999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEE
Q psy11350 369 SVDFSPDGYHLATGSEDNAVKIWD 392 (471)
Q Consensus 369 ~~~~sp~~~~l~s~s~dg~i~iwd 392 (471)
+++|+|+|++|++|+.||+|+||+
T Consensus 331 ~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 331 TLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999999996
No 39
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2e-36 Score=288.26 Aligned_cols=243 Identities=19% Similarity=0.338 Sum_probs=204.7
Q ss_pred eeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEE
Q psy11350 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 145 ~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 224 (471)
...+.+|..+|.+++|+|++.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++. +|++++.|++|+
T Consensus 69 ~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~-----~l~s~~~d~~i~ 143 (343)
T 2xzm_R 69 HKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNR-----QILSAGAEREIK 143 (343)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTT-----EEEEEETTSCEE
T ss_pred cchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCC-----EEEEEcCCCEEE
Confidence 456789999999999999999999999999999999999999999999999999999999998 799999999999
Q ss_pred EEeCCCCcceeeec---CCCCcceEEEEECCCC----------CEEEEEeCCCeEEecccc----ccccCCCCcceEEEE
Q psy11350 225 LWSLDKDTPLANLE---GHEPFRVSRIKFHPSG----------RFLGTCCWDHSWRLDTPL----ANLEGHEPFRVSRIK 287 (471)
Q Consensus 225 iwd~~~~~~~~~~~---~~~~~~v~~~~~s~~~----------~~i~~~~~d~~~~~~~~~----~~~~~~~~~~v~~l~ 287 (471)
+||+... ...... .|.. .+.+++|+|++ .++++++.|+.+.+|... ..+.+| ...|.+++
T Consensus 144 ~wd~~~~-~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h-~~~v~~~~ 220 (343)
T 2xzm_R 144 LWNILGE-CKFSSAEKENHSD-WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAH-ESNVNHLS 220 (343)
T ss_dssp EEESSSC-EEEECCTTTSCSS-CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECC-SSCEEEEE
T ss_pred EEeccCC-ceeeeecccCCCc-eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCc-cccceEEE
Confidence 9999743 332222 3333 79999999987 799999999998887532 234555 56899999
Q ss_pred ECCCCCEEEEEecCCeEEEEECCCC-cEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEE--Eec---
Q psy11350 288 FHPSGRFLGTCCWDHSWRLWDLNQG-QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM--FLE--- 361 (471)
Q Consensus 288 ~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~--~~~--- 361 (471)
|+|++++|++|+.||+|++||+... .....+ .+...|.+++|+|++.+++++ .|+.|++||+.+++... .+.
T Consensus 221 ~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~ 298 (343)
T 2xzm_R 221 ISPNGKYIATGGKDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEP 298 (343)
T ss_dssp ECTTSSEEEEEETTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCS
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCc
Confidence 9999999999999999999999543 333333 356679999999999887655 58889999998775433 443
Q ss_pred --------ccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc
Q psy11350 362 --------GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 362 --------~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~ 397 (471)
+|...|.+++|+|+|++|++|+.||+|++|++.++.
T Consensus 299 ~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 299 ITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp GGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred chhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 688899999999999999999999999999987653
No 40
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.9e-36 Score=292.78 Aligned_cols=256 Identities=17% Similarity=0.189 Sum_probs=215.6
Q ss_pred hccccceeeeeecCCcCeEEEEEecCC-CEEEEEeCCCcEEEEeCCCCceEEEee--cCCCCEEEEEEee-CCCCCCccE
Q psy11350 138 HLTSLSIYCSQVGDTRPISYCSFSPDS-QHVATASWSGLCKLWTVPECELVQTFR--GHDCNVGAIEFHP-LPSEGAVCS 213 (471)
Q Consensus 138 ~~~~~~~~~~~~gh~~~V~~~~~s~~~-~~l~tg~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~-~~~~~~~~~ 213 (471)
.+..+.....+.+|...|++++|+|++ ++|++|+.||.|+|||+.+++....+. +|...|.+++|+| ++. +
T Consensus 59 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-----~ 133 (383)
T 3ei3_B 59 SLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTN-----Q 133 (383)
T ss_dssp HHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEE-----E
T ss_pred cccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCC-----E
Confidence 345667777889999999999999999 999999999999999999888877765 6999999999999 445 7
Q ss_pred EEEEeCCCcEEEEeCCCCcceeeecCCC--CcceEEEEECCCCCEEEEEeCCCeEEeccc----cccccCCCCcceEEEE
Q psy11350 214 LASCAQDGSVKLWSLDKDTPLANLEGHE--PFRVSRIKFHPSGRFLGTCCWDHSWRLDTP----LANLEGHEPFRVSRIK 287 (471)
Q Consensus 214 l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~----~~~~~~~~~~~v~~l~ 287 (471)
|++++.|+.|++||+.+ ..+..+..+. ...|.+++|+|+++++++++.|+.+.++.. ...+..| ...|.+++
T Consensus 134 l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h-~~~v~~~~ 211 (383)
T 3ei3_B 134 LFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLH-KAKVTHAE 211 (383)
T ss_dssp EEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECS-SSCEEEEE
T ss_pred EEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccC-CCcEEEEE
Confidence 99999999999999975 5555555443 247999999999999999999999777653 3345556 56899999
Q ss_pred ECCCCC-EEEEEecCCeEEEEECCC----CcEEEEeeCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEeCCCCeeEEEec
Q psy11350 288 FHPSGR-FLGTCCWDHSWRLWDLNQ----GQEVLHQEGHGKPVYCMSFQG-DGSVVATGGLDAFGRVWDLRTGRCIMFLE 361 (471)
Q Consensus 288 ~~~~~~-~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~s~-d~~~l~t~~~dg~i~iwd~~~~~~~~~~~ 361 (471)
|+|+++ +|++++.|++|++||+++ +..+..+ +|...|++++|+| ++.+|++++.|+.|++||+++++.+..+.
T Consensus 212 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 212 FNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp ECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred ECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 999999 999999999999999997 5566555 6999999999999 99999999999999999999987766665
Q ss_pred ccC-----------------cCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 362 GHL-----------------KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 362 ~h~-----------------~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
+|. +.+..++|+|++++ +|+.||.|++||+.+++++..+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~ 347 (383)
T 3ei3_B 291 IHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLR 347 (383)
T ss_dssp ECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEEC
T ss_pred cccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeec
Confidence 443 34555677777766 77899999999999998876654
No 41
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.4e-36 Score=284.34 Aligned_cols=252 Identities=22% Similarity=0.302 Sum_probs=218.3
Q ss_pred eeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC----ceEEEeecCCCCEEEEEEeeC--CCCCCccEEEEEeC
Q psy11350 146 CSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC----ELVQTFRGHDCNVGAIEFHPL--PSEGAVCSLASCAQ 219 (471)
Q Consensus 146 ~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~~~~--~~~~~~~~l~s~~~ 219 (471)
..+.||.++|++++|+|++++|++|+.||.|++||+.++ +....+.+|...|.+++|+|. +. +|++++.
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-----~l~s~~~ 79 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-----IIASASY 79 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-----EEEEEET
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-----EEEEEcC
Confidence 456799999999999999999999999999999999876 467778899999999999994 65 7999999
Q ss_pred CCcEEEEeCCCC---------cceeeecCCCCcceEEEEECCC--CCEEEEEeCCCeEEeccccc-----cc--------
Q psy11350 220 DGSVKLWSLDKD---------TPLANLEGHEPFRVSRIKFHPS--GRFLGTCCWDHSWRLDTPLA-----NL-------- 275 (471)
Q Consensus 220 dg~i~iwd~~~~---------~~~~~~~~~~~~~v~~~~~s~~--~~~i~~~~~d~~~~~~~~~~-----~~-------- 275 (471)
||.|++||+.++ +.+..+..+.. .|.+++|+|+ +.++++++.|+.+.++.... .+
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKG-SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCSS-CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccCC-ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccc
Confidence 999999999877 44666776665 8999999999 99999999999977754211 11
Q ss_pred ----cCCCCcceEEEEECCC---CCEEEEEecCCeEEEEECCCCcE--EEEeeCCCCCeEEEEEeCCC----CEEEEEeC
Q psy11350 276 ----EGHEPFRVSRIKFHPS---GRFLGTCCWDHSWRLWDLNQGQE--VLHQEGHGKPVYCMSFQGDG----SVVATGGL 342 (471)
Q Consensus 276 ----~~~~~~~v~~l~~~~~---~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~s~d~----~~l~t~~~ 342 (471)
.......+.+++|+|+ +.+|++++.++.+.+|+...++. +..+.+|...|++++|+|++ .+|++|+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred cccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcC
Confidence 1123557999999997 89999999999998888887765 66778899999999999998 89999999
Q ss_pred CCeEEEEeCCCC----------------------------------------------eeEEEecccCcCEEEEEEcCCC
Q psy11350 343 DAFGRVWDLRTG----------------------------------------------RCIMFLEGHLKSVFSVDFSPDG 376 (471)
Q Consensus 343 dg~i~iwd~~~~----------------------------------------------~~~~~~~~h~~~v~~~~~sp~~ 376 (471)
||.|++||++++ +++..+.+|...|++++|+|++
T Consensus 239 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 318 (351)
T 3f3f_A 239 DGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG 318 (351)
T ss_dssp TSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSS
T ss_pred CCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCC
Confidence 999999999875 6777888999999999999999
Q ss_pred CEEEEEeCCCcEEEEECCCccchheec
Q psy11350 377 YHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 377 ~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
++|++|+.||.|++||+.+++.+..+.
T Consensus 319 ~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 319 TILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp CCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred CEEEEecCCCcEEEEecCcCcchhhee
Confidence 999999999999999999987766544
No 42
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.5e-37 Score=297.70 Aligned_cols=263 Identities=21% Similarity=0.336 Sum_probs=223.3
Q ss_pred chhhhhhHHHHhhccccceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC-------ceEEEeecCCCCEE
Q psy11350 126 ATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC-------ELVQTFRGHDCNVG 198 (471)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~ 198 (471)
.++.++.|+... ......+.+|...|.+++|+|+|++|++|+.|+.|++|++.+. .....+.+|.+.|.
T Consensus 86 ~D~~v~iWd~~~----~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~ 161 (380)
T 3iz6_a 86 QDGRLIVWNALT----SQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYAS 161 (380)
T ss_dssp TTSEEEEEETTT----TEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCC
T ss_pred CCCeEEEEECCC----CccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceE
Confidence 445555555432 2334567799999999999999999999999999999998653 23456789999999
Q ss_pred EEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeee-----cCCCCcceEEEEECC-CCCEEEEEeCCCeEEeccc-
Q psy11350 199 AIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL-----EGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLDTP- 271 (471)
Q Consensus 199 ~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----~~~~~~~v~~~~~s~-~~~~i~~~~~d~~~~~~~~- 271 (471)
++.|+|++.. .|++|+.|++|++||+.+++.+..+ .+|.. .|.++.|++ ++.++++|+.|+.+++|..
T Consensus 162 ~~~~~~~~~~----~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~ 236 (380)
T 3iz6_a 162 SCQYVPDQET----RLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTA-DVLSLSINSLNANMFISGSCDTTVRLWDLR 236 (380)
T ss_dssp CCBCCSSSSS----CEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCS-CEEEEEECSSSCCEEEEEETTSCEEEEETT
T ss_pred EEEEecCCCC----EEEEECCCCcEEEEEcCCCcEEEEeecccCCCCcc-CeEEEEeecCCCCEEEEEECCCeEEEEECC
Confidence 9999997653 6999999999999999999888776 34444 899999977 8899999999999777643
Q ss_pred -----cccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCC-------CCeEEEEEeCCCCEEEE
Q psy11350 272 -----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG-------KPVYCMSFQGDGSVVAT 339 (471)
Q Consensus 272 -----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------~~v~~~~~s~d~~~l~t 339 (471)
...+.+| ...|.+++|+|++++|++++.||+|++||+++++.+..+..+. ..|++++|+|+|.+|++
T Consensus 237 ~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 315 (380)
T 3iz6_a 237 ITSRAVRTYHGH-EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFA 315 (380)
T ss_dssp TTCCCCEEECCC-SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEE
T ss_pred CCCcceEEECCc-CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEE
Confidence 3345566 5689999999999999999999999999999998887775543 24899999999999999
Q ss_pred EeCCCeEEEEeCCCCeeEEEe----cccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccc
Q psy11350 340 GGLDAFGRVWDLRTGRCIMFL----EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398 (471)
Q Consensus 340 ~~~dg~i~iwd~~~~~~~~~~----~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 398 (471)
|+.||.|++||+.+++.+..+ .+|.+.|++++|+|+|.+|++|+.||+|++|++...+.
T Consensus 316 g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 316 GYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp ECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred EECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 999999999999999888777 68999999999999999999999999999999987653
No 43
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=299.96 Aligned_cols=301 Identities=17% Similarity=0.209 Sum_probs=228.6
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc-----------eEEEeecCC------------CCEEEEEEeeCC
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE-----------LVQTFRGHD------------CNVGAIEFHPLP 206 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~-----------~~~~~~~h~------------~~v~~l~~~~~~ 206 (471)
.|.+.|++++|+|+|++||+|+.||.|+||++.+++ ....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 468999999999999999999999999999998876 578889998 889999999997
Q ss_pred --CCCCccEEEEEeCCCcEEEEeCCCCcce---------------------------------------eee-cCCCCcc
Q psy11350 207 --SEGAVCSLASCAQDGSVKLWSLDKDTPL---------------------------------------ANL-EGHEPFR 244 (471)
Q Consensus 207 --~~~~~~~l~s~~~dg~i~iwd~~~~~~~---------------------------------------~~~-~~~~~~~ 244 (471)
. .|++++.||+|++||+.++... ..+ ..|.. .
T Consensus 106 ~~~-----~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~ 179 (447)
T 3dw8_B 106 NAA-----QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY-H 179 (447)
T ss_dssp SSS-----EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS-C
T ss_pred Ccc-----eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc-c
Confidence 4 7999999999999998764331 122 34444 8
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEeccccc-------------cccCCCCcceEEEEECCCC-CEEEEEecCCeEEEEECC
Q psy11350 245 VSRIKFHPSGRFLGTCCWDHSWRLDTPLA-------------NLEGHEPFRVSRIKFHPSG-RFLGTCCWDHSWRLWDLN 310 (471)
Q Consensus 245 v~~~~~s~~~~~i~~~~~d~~~~~~~~~~-------------~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~iwd~~ 310 (471)
|.+++|+|++++++++ .|+.+.+|.... .+..| ...|.+++|+|++ ++|++++.||+|++||++
T Consensus 180 v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 180 INSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEEL-TEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGC-CCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred eEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeeccccccccc-CcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 9999999999999998 799877764431 23355 5689999999998 999999999999999999
Q ss_pred CCcE----EEEeeCCCC------------CeEEEEEeCCCCEEEEEeCCCeEEEEeCCC-CeeEEEecccCcC-------
Q psy11350 311 QGQE----VLHQEGHGK------------PVYCMSFQGDGSVVATGGLDAFGRVWDLRT-GRCIMFLEGHLKS------- 366 (471)
Q Consensus 311 ~~~~----~~~~~~~~~------------~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~h~~~------- 366 (471)
+++. +..+..|.. .|.+++|+|++++|++++. +.|++||+++ ++++..+.+|...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~ 336 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSL 336 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHH
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccc
Confidence 9886 678888876 8999999999999999998 9999999997 8888888888642
Q ss_pred --------EEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccCCCccceeeccccceeeeecccCCCcccccchh
Q psy11350 367 --------VFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSA 438 (471)
Q Consensus 367 --------v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 438 (471)
+..++|+|++.+|++|+.||.|++||+.+++.+. +........ .........+ ... ... ..
T Consensus 337 ~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~-~~~~~~~~~~--~~~-~~~------~~ 405 (447)
T 3dw8_B 337 YENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNK-PRTVLKPRKV--CAS-GKR------KK 405 (447)
T ss_dssp HHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCC-TTCBCCCCCE--ECS-SCC------CT
T ss_pred ccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccc-cccccCCccc--ccc-CCc------cc
Confidence 3349999999999999999999999999988763 222111100 0000000000 000 000 00
Q ss_pred hhcccccceeeecccceeeeecCCeEEEeecC
Q psy11350 439 LKEQVEPIPLLLDIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 439 ~~~~~~~~~~~~~~~~l~fs~dg~~lA~~~~~ 470 (471)
.......+.+...+..++|+|+|.+||+.+..
T Consensus 406 ~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~ 437 (447)
T 3dw8_B 406 DEISVDSLDFNKKILHTAWHPKENIIAVATTN 437 (447)
T ss_dssp TCEEGGGCCTTSCCCEEEECSSSSEEEEECSS
T ss_pred ccccccccccCCceeEEEECCCCCEEEEEecc
Confidence 01111233344567889999999999998753
No 44
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-36 Score=292.81 Aligned_cols=313 Identities=13% Similarity=0.186 Sum_probs=242.0
Q ss_pred eecCCcCeEEEEEecCCC-EEEEEeCCCcEEEEeC----CCCc------eEEEeec----------CCCCEEEEEEeeCC
Q psy11350 148 QVGDTRPISYCSFSPDSQ-HVATASWSGLCKLWTV----PECE------LVQTFRG----------HDCNVGAIEFHPLP 206 (471)
Q Consensus 148 ~~gh~~~V~~~~~s~~~~-~l~tg~~dg~i~iwd~----~~~~------~~~~~~~----------h~~~v~~l~~~~~~ 206 (471)
...|..+|++++|+|+++ +||+|+.||.|++|++ .+++ ....+.. |...|.+++|+|++
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC
Confidence 346779999999999999 9999999999999999 8887 4555554 68899999999998
Q ss_pred CCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCc
Q psy11350 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPF 281 (471)
Q Consensus 207 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~ 281 (471)
. +|++++.||.|++|| .++..+..+..|.. .|.+++|+|+++++++++.|+.+.++.. ...+..+ ..
T Consensus 121 ~-----~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~ 192 (425)
T 1r5m_A 121 N-----SIVTGVENGELRLWN-KTGALLNVLNFHRA-PIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELK-ET 192 (425)
T ss_dssp S-----EEEEEETTSCEEEEE-TTSCEEEEECCCCS-CEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---
T ss_pred C-----EEEEEeCCCeEEEEe-CCCCeeeeccCCCc-cEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecc-cc
Confidence 8 799999999999999 67788888887776 8999999999999999999999776543 2223333 22
Q ss_pred c---------------eEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeE
Q psy11350 282 R---------------VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFG 346 (471)
Q Consensus 282 ~---------------v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i 346 (471)
. +.++.|+|++ .+++++.+|.|++||+.+++.+..+..|..+|.+++|+|++.+|++++.|+.|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 271 (425)
T 1r5m_A 193 GGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTL 271 (425)
T ss_dssp -------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred CccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 2 8889999874 58899999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccCC---------Cccceeeccc
Q psy11350 347 RVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLP---------NSIGVTSLLT 417 (471)
Q Consensus 347 ~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~ 417 (471)
++||+++++++..+.+|...|.+++|+|++ +|++++.||.|++||+++++++..+..+.. ....+++...
T Consensus 272 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 272 RIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp EEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEEC
Confidence 999999999999999999999999999999 999999999999999999988876654321 2222333333
Q ss_pred cceeeeecccCCCcc-cccchhh--------hcccccceee--e-cccceeeeecCCeEEEeecC
Q psy11350 418 DLYIDVLESLNPGIG-NIISSAL--------KEQVEPIPLL--L-DIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 418 d~~~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~~~--~-~~~~l~fs~dg~~lA~~~~~ 470 (471)
+..+.+|........ ....... ...+..+... . .+..++|+|+|++||+++.+
T Consensus 351 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 415 (425)
T 1r5m_A 351 DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL 415 (425)
T ss_dssp TSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS
T ss_pred CCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC
Confidence 444444443322100 0000000 0022233322 2 67899999999999998765
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.6e-35 Score=278.82 Aligned_cols=243 Identities=19% Similarity=0.324 Sum_probs=212.2
Q ss_pred eeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCce---EEEee--cCCCCEEEEEEeeCCCCCCccEEEEEeCCC
Q psy11350 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECEL---VQTFR--GHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~---~~~~~--~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg 221 (471)
...+|..+|++++|+|++++|++++ ||.|++||+.++.. ...+. .|...|.+++|+|++. +|++++.||
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~d~ 119 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC-----TLIVGGEAS 119 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS-----EEEEEESSS
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCC-----EEEEEcCCC
Confidence 4458999999999999999999999 99999999987653 33333 7899999999999987 799999999
Q ss_pred cEEEEeCCCCc--ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCCCE
Q psy11350 222 SVKLWSLDKDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRF 294 (471)
Q Consensus 222 ~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~ 294 (471)
.|++||+.+++ ....+..+.. .+.+++|+|+++++++++.++.+.++.. ...+..| ...+.+++|+|++++
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~ 197 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSSAP-ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH-TDGASCIDISNDGTK 197 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSE
T ss_pred cEEEEECCCCCcceeeecccCCC-ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecc-cCceEEEEECCCCCE
Confidence 99999998887 4555666655 8999999999999999999999776542 3344555 568999999999999
Q ss_pred EEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcC
Q psy11350 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374 (471)
Q Consensus 295 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp 374 (471)
|++++.||.|++||+++++.+..+. |..++.+++|+|++.+|++++.++.|++||+++++.. .+..|...|.+++|+|
T Consensus 198 l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~ 275 (337)
T 1gxr_A 198 LWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAY 275 (337)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECT
T ss_pred EEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECC
Confidence 9999999999999999998877764 7888999999999999999999999999999988754 6778999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCccch
Q psy11350 375 DGYHLATGSEDNAVKIWDLRKRRLL 399 (471)
Q Consensus 375 ~~~~l~s~s~dg~i~iwd~~~~~~~ 399 (471)
++++|++++.||.|++||+.+++.+
T Consensus 276 ~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 276 CGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCEEEEecCCCcEEEEECCCCeEE
Confidence 9999999999999999999988765
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.7e-36 Score=296.65 Aligned_cols=306 Identities=15% Similarity=0.121 Sum_probs=239.3
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcc
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP 233 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 233 (471)
.+++++|+|++++|++|+.||.|++||+.+++....+..| ..+....|+|++. +|++++.||.|++||+.+++.
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~l~~~~~dg~i~iwd~~~~~~ 131 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMR-----RFILGTTEGDIKVLDSNFNLQ 131 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSC-----EEEEEETTSCEEEECTTSCEE
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCC-----EEEEEECCCCEEEEeCCCcce
Confidence 4557899999999999999999999999988777666666 4444557788887 799999999999999999888
Q ss_pred eeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEE
Q psy11350 234 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWD 308 (471)
Q Consensus 234 ~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd 308 (471)
...+..|.. .|.+++|+|+++++++++.|+.+.+|.. ...+.+| ...|.+++|+|++++|++++.||+|++||
T Consensus 132 ~~~~~~h~~-~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 209 (420)
T 3vl1_A 132 REIDQAHVS-EITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH-RATVTDIAIIDRGRNVLSASLDGTIRLWE 209 (420)
T ss_dssp EEETTSSSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC-SSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred eeecccccC-ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC-CCcEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence 888777776 8999999999999999999999777543 3445566 66899999999999999999999999999
Q ss_pred CCCCcEEEEeeC---CCCCeEEEE---------------------EeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec-cc
Q psy11350 309 LNQGQEVLHQEG---HGKPVYCMS---------------------FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE-GH 363 (471)
Q Consensus 309 ~~~~~~~~~~~~---~~~~v~~~~---------------------~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~-~h 363 (471)
+++++.+..+.. |...+.+++ |+|++++|++|+.||.|++||+++++.+..+. .|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 289 (420)
T 3vl1_A 210 CGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKF 289 (420)
T ss_dssp TTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTT
T ss_pred CCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccccc
Confidence 999998888764 344455554 57889999999999999999999998777665 58
Q ss_pred CcCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCccc-hheecccCCCc---------cceeeccccceeeeecccCCCcc
Q psy11350 364 LKSVFSVDFSPDGY-HLATGSEDNAVKIWDLRKRRL-LKWCTQLLPNS---------IGVTSLLTDLYIDVLESLNPGIG 432 (471)
Q Consensus 364 ~~~v~~~~~sp~~~-~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~ 432 (471)
...|.+++|+|++. +|++|+.||.|++||+++++. +..+..+.... ..+++...|..+.+|....+...
T Consensus 290 ~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 369 (420)
T 3vl1_A 290 TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESE 369 (420)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCC
T ss_pred CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCC
Confidence 88999999999998 999999999999999998754 55555433322 24455566677777776554322
Q ss_pred cccchhhhcccccceeeecccceeeeecCC----eEEEee
Q psy11350 433 NIISSALKEQVEPIPLLLDIQKLTFKFDSD----LHAMVL 468 (471)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~l~fs~dg~----~lA~~~ 468 (471)
..+... ............+..++|+|||+ ++|+..
T Consensus 370 ~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~ 408 (420)
T 3vl1_A 370 RPAIEF-ETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK 408 (420)
T ss_dssp SCEECT-TSCEEECCSSCCCCEEEEECCSSSSCEEEEEET
T ss_pred ccceec-cCccEEccCCcceEEEEEccCCCCcceEEEEcC
Confidence 211110 11111222334678999999999 566544
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=297.22 Aligned_cols=312 Identities=17% Similarity=0.210 Sum_probs=249.4
Q ss_pred CCcCeEEEEEecCCC-EEEEE----------eCCCcEEEEeCCCCc---eEEEeecCCCCEEEEEEeeCCCCCCccEEEE
Q psy11350 151 DTRPISYCSFSPDSQ-HVATA----------SWSGLCKLWTVPECE---LVQTFRGHDCNVGAIEFHPLPSEGAVCSLAS 216 (471)
Q Consensus 151 h~~~V~~~~~s~~~~-~l~tg----------~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s 216 (471)
+...|.+++|+|+++ +|++| +.||.|+|||+.++. .+..+ .|...|.+++|+|++. +|++
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~-----~l~~ 84 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNK-----IIAG 84 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSS-----CEEE
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCC-----eEEE
Confidence 445788999999987 89999 889999999998875 33333 5889999999999998 6999
Q ss_pred EeCCCcEEEEeCCC----CcceeeecCCCCcceEEEEECCC-CCEEEEEeCCCeEEecccccc--------------ccC
Q psy11350 217 CAQDGSVKLWSLDK----DTPLANLEGHEPFRVSRIKFHPS-GRFLGTCCWDHSWRLDTPLAN--------------LEG 277 (471)
Q Consensus 217 ~~~dg~i~iwd~~~----~~~~~~~~~~~~~~v~~~~~s~~-~~~i~~~~~d~~~~~~~~~~~--------------~~~ 277 (471)
++.||.|++||+.+ ...+..+..|.. .|.+++|+|+ +.++++++.|+.+.++..... ...
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSMARFSNHSS-SVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS 163 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEEEECCCSSS-CCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC
T ss_pred EccCCeEEEeecccccccccchhhccCCcc-ceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccC
Confidence 99999999999987 346777777776 8999999998 899999999999877643221 123
Q ss_pred CCCcceEEEEECCC-CCEEEEEecCCeEEEEECCCCcEEEEeeCC------CCCeEEEEEeCCC-CEEEEEeCCC---eE
Q psy11350 278 HEPFRVSRIKFHPS-GRFLGTCCWDHSWRLWDLNQGQEVLHQEGH------GKPVYCMSFQGDG-SVVATGGLDA---FG 346 (471)
Q Consensus 278 ~~~~~v~~l~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------~~~v~~~~~s~d~-~~l~t~~~dg---~i 346 (471)
| ...|.+++|+|+ +.+|++++.||.|++||+++++.+..+..| ...|.+++|+|++ .+|++++.|+ .|
T Consensus 164 ~-~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 164 S-VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSI 242 (416)
T ss_dssp S-SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCC
T ss_pred C-CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceE
Confidence 3 568999999998 789999999999999999999998888776 7899999999987 6999999998 99
Q ss_pred EEEeCCCC-eeEEEec-ccCcCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCccchheecccC---------CCc-ccee
Q psy11350 347 RVWDLRTG-RCIMFLE-GHLKSVFSVDFSP-DGYHLATGSEDNAVKIWDLRKRRLLKWCTQLL---------PNS-IGVT 413 (471)
Q Consensus 347 ~iwd~~~~-~~~~~~~-~h~~~v~~~~~sp-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---------~~~-~~~~ 413 (471)
++||++++ .++..+. +|...|.+++|+| ++.+|++++.||.|++||+++++++..+..+. +.. ..++
T Consensus 243 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFA 322 (416)
T ss_dssp CEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEE
T ss_pred EEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEE
Confidence 99999986 6777787 8999999999999 99999999999999999999999888775432 222 4566
Q ss_pred eccccceeeeecccCCCcccccch--------------h-----hhcccccc------eeeecccceeeeecCCeEEEee
Q psy11350 414 SLLTDLYIDVLESLNPGIGNIISS--------------A-----LKEQVEPI------PLLLDIQKLTFKFDSDLHAMVL 468 (471)
Q Consensus 414 ~~~~d~~~~~~~~~~~~~~~~~~~--------------~-----~~~~~~~~------~~~~~~~~l~fs~dg~~lA~~~ 468 (471)
+...|..+.+|............. . .......+ .....+..++|+|||++||+.+
T Consensus 323 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~ 402 (416)
T 2pm9_A 323 CASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITP 402 (416)
T ss_dssp ECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCT
T ss_pred EEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeC
Confidence 667788888888765532221100 0 00000000 0223456899999999999887
Q ss_pred cC
Q psy11350 469 NQ 470 (471)
Q Consensus 469 ~~ 470 (471)
++
T Consensus 403 ~d 404 (416)
T 2pm9_A 403 DG 404 (416)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 48
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-35 Score=275.63 Aligned_cols=252 Identities=21% Similarity=0.310 Sum_probs=222.1
Q ss_pred cccceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeC
Q psy11350 140 TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ 219 (471)
Q Consensus 140 ~~~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~ 219 (471)
..+.....+.+|.++|++++| |++++|++|+.||.|++||+.+++....+..|...|.+++|+|++. +|++++.
T Consensus 6 ~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~ 79 (313)
T 3odt_A 6 TGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKE-----LLLFGGK 79 (313)
T ss_dssp CCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTT-----EEEEEET
T ss_pred ccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCC-----EEEEecC
Confidence 345667788999999999999 9999999999999999999999999999999999999999999988 7999999
Q ss_pred CCcEEEEeCCCC---cceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecc---ccccccCCCCcceEEEEECC-CC
Q psy11350 220 DGSVKLWSLDKD---TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT---PLANLEGHEPFRVSRIKFHP-SG 292 (471)
Q Consensus 220 dg~i~iwd~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~---~~~~~~~~~~~~v~~l~~~~-~~ 292 (471)
||.|++|++... +.+..+..|.. .|.++.| ++.++++++.|+.+.++. ....+..| ...+.++.|+| ++
T Consensus 80 dg~i~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 80 DTMINGVPLFATSGEDPLYTLIGHQG-NVCSLSF--QDGVVISGSWDKTAKVWKEGSLVYNLQAH-NASVWDAKVVSFSE 155 (313)
T ss_dssp TSCEEEEETTCCTTSCC-CEECCCSS-CEEEEEE--ETTEEEEEETTSEEEEEETTEEEEEEECC-SSCEEEEEEEETTT
T ss_pred CCeEEEEEeeecCCCCcccchhhccc-CEEEEEe--cCCEEEEEeCCCCEEEEcCCcEEEecccC-CCceeEEEEccCCC
Confidence 999999998654 45666777766 8999999 688999999999977764 23344555 56899999988 89
Q ss_pred CEEEEEecCCeEEEEECCCCcEEEEeeC-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEE
Q psy11350 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEG-HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371 (471)
Q Consensus 293 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 371 (471)
++|++++.||.|++|| ..+....+.. |...+.+++|+|++. +++++.||.|++||+++++++..+.+|...|++++
T Consensus 156 ~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~ 232 (313)
T 3odt_A 156 NKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIK 232 (313)
T ss_dssp TEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred CEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEE
Confidence 9999999999999999 4566777776 899999999999988 89999999999999999999999999999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCccchheeccc
Q psy11350 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 372 ~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 405 (471)
|+|++ .|++++.||.|++||+++++++..+..+
T Consensus 233 ~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 233 LLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLP 265 (313)
T ss_dssp ECTTS-CEEEEETTSEEEEECTTTCCEEEEEECS
T ss_pred EecCC-CEEEEecCCEEEEEECCCCceeEEEecc
Confidence 99999 5899999999999999999888776543
No 49
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.3e-37 Score=300.16 Aligned_cols=222 Identities=18% Similarity=0.226 Sum_probs=183.7
Q ss_pred cccceeeeeecCCcCeEEEEEec-CCCEEEEEeCCCcEEEEeCCCCce--EEEeecCCCCEEEEEEeeCCCCCCccEEEE
Q psy11350 140 TSLSIYCSQVGDTRPISYCSFSP-DSQHVATASWSGLCKLWTVPECEL--VQTFRGHDCNVGAIEFHPLPSEGAVCSLAS 216 (471)
Q Consensus 140 ~~~~~~~~~~gh~~~V~~~~~s~-~~~~l~tg~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s 216 (471)
..+.......+|...|+||+|+| ++++||+|+.||.|+|||+.+++. ...+.+|.+.|++|+|+|.+.. +|++
T Consensus 107 ~~~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~----~l~s 182 (435)
T 4e54_B 107 DSYRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTN----QFYA 182 (435)
T ss_dssp TTTTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTT----EEEE
T ss_pred cceeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCC----EEEE
Confidence 34445556778999999999999 567999999999999999987654 4455689999999999985433 8999
Q ss_pred EeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEE
Q psy11350 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLG 296 (471)
Q Consensus 217 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 296 (471)
|+.||+|++||++++........+.. ...+.+++|+|++++|+
T Consensus 183 ~s~D~~v~iwd~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~l~ 225 (435)
T 4e54_B 183 SSMEGTTRLQDFKGNILRVFASSDTI-------------------------------------NIWFCSLDVSASSRMVV 225 (435)
T ss_dssp ECSSSCEEEEETTSCEEEEEECCSSC-------------------------------------SCCCCCEEEETTTTEEE
T ss_pred EeCCCEEEEeeccCCceeEEeccCCC-------------------------------------CccEEEEEECCCCCEEE
Confidence 99999999999976533222222111 33578899999999999
Q ss_pred EEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEeCCCCeeEE---EecccCcCEEEEEE
Q psy11350 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS-VVATGGLDAFGRVWDLRTGRCIM---FLEGHLKSVFSVDF 372 (471)
Q Consensus 297 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~t~~~dg~i~iwd~~~~~~~~---~~~~h~~~v~~~~~ 372 (471)
+|+.||.|++||++. +.+..+.+|...|++++|+|++. +|++|+.|+.|+|||+++++... ...+|...|++++|
T Consensus 226 ~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 304 (435)
T 4e54_B 226 TGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACF 304 (435)
T ss_dssp EECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCB
T ss_pred EEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeE
Confidence 999999999999964 56778889999999999999875 78899999999999998875443 33579999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 373 SPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 373 sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
+|+|.+|++|+.||.|+|||+.+++....+.
T Consensus 305 spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~ 335 (435)
T 4e54_B 305 SPDGARLLTTDQKSEIRVYSASQWDCPLGLI 335 (435)
T ss_dssp CTTSSEEEEEESSSCEEEEESSSSSSEEEEC
T ss_pred CCCCCeeEEEcCCCEEEEEECCCCccceEEe
Confidence 9999999999999999999999988766554
No 50
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2e-35 Score=283.94 Aligned_cols=240 Identities=15% Similarity=0.219 Sum_probs=213.7
Q ss_pred ecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc--eEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEE
Q psy11350 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE--LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 226 (471)
..|..+|++++|+|++++|++|+.||.|++||+.+++ .+..+.+|...|.+++|+|++. +|++++.||.|++|
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-----~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN-----RIVTCGTDRNAYVW 79 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTT-----EEEEEETTSCEEEE
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCC-----EEEEEcCCCeEEEE
Confidence 4599999999999999999999999999999999887 8889999999999999999987 79999999999999
Q ss_pred eCCCCcceeee--cCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc--------cccccCCCCcceEEEEECCCCCEEE
Q psy11350 227 SLDKDTPLANL--EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP--------LANLEGHEPFRVSRIKFHPSGRFLG 296 (471)
Q Consensus 227 d~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~--------~~~~~~~~~~~v~~l~~~~~~~~l~ 296 (471)
|+.+++....+ ..+.. .+.+++|+|+++++++++.++.+.++.. ...+...+...|.+++|+|++++|+
T Consensus 80 d~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 158 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINR-AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA 158 (372)
T ss_dssp EEETTEEEEEEECCCCSS-CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred ECCCCeeeeeEEeecCCC-ceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEE
Confidence 99888755443 34443 8999999999999999999998666432 1222233366899999999999999
Q ss_pred EEecCCeEEEEEC------------------CCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEE
Q psy11350 297 TCCWDHSWRLWDL------------------NQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358 (471)
Q Consensus 297 ~~~~dg~i~iwd~------------------~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~ 358 (471)
+++.||.|++||+ ..++.+..+.+|...|.+++|+|++.+|++++.||.|++||+++++++.
T Consensus 159 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 159 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred EEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 9999999999995 4678888888999999999999999999999999999999999999999
Q ss_pred EecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 359 FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 359 ~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
.+..|...|.+++|+|++.+|++| .|+.|++|++..
T Consensus 239 ~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 239 TLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999999999999999999988887 899999999988
No 51
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.5e-34 Score=286.81 Aligned_cols=246 Identities=20% Similarity=0.328 Sum_probs=217.0
Q ss_pred ceeeeeecCCcCe-EEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCC
Q psy11350 143 SIYCSQVGDTRPI-SYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221 (471)
Q Consensus 143 ~~~~~~~gh~~~V-~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg 221 (471)
+....+.+|...| .++.+ ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++ ++++|+.||
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~------~l~s~s~dg 183 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG------ILVSGSTDR 183 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT------EEEEEETTS
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC------EEEEEeCCC
Confidence 4556788999886 55555 56899999999999999999999999999999999999999876 599999999
Q ss_pred cEEEEeCCCCcceeeecCCCCcceEEEEEC--CCCCEEEEEeCCCeEEecccc---------------------------
Q psy11350 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFH--PSGRFLGTCCWDHSWRLDTPL--------------------------- 272 (471)
Q Consensus 222 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~i~~~~~d~~~~~~~~~--------------------------- 272 (471)
+|++||+.+++.+..+..|.. .|.+++|+ +++.++++++.|+.+.++...
T Consensus 184 ~i~vwd~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFEGHNS-TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSS-CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred CEEEEECCCCcEEEEECCCCC-ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 999999999999999988876 89999998 688999999999997765322
Q ss_pred -ccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeC
Q psy11350 273 -ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351 (471)
Q Consensus 273 -~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~ 351 (471)
..+.+| ...+.++ +++++++++++.||.|++||+++++++..+.+|...|.+++|+|++.+|++|+.||.|++||+
T Consensus 263 ~~~~~~~-~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 263 VGVLRGH-MASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL 339 (464)
T ss_dssp EEEECCC-SSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred EEEccCc-cceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 123334 3355555 677899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchhee
Q psy11350 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 352 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
++++++..+.+|...|.+++|+ +.+|++|+.||.|++||+.+++....+
T Consensus 340 ~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 340 ENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee
Confidence 9999999999999999999997 589999999999999999988765544
No 52
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.3e-35 Score=323.99 Aligned_cols=243 Identities=23% Similarity=0.380 Sum_probs=220.6
Q ss_pred eeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEE
Q psy11350 146 CSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL 225 (471)
Q Consensus 146 ~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 225 (471)
..+.+|.+.|++++|+|+|++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++. +|++++.||+|++
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~-----~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDS-----YIATCSADKKVKI 683 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-----EEEEEETTSEEEE
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCC-----EEEEEeCCCeEEE
Confidence 35679999999999999999999999999999999999999999999999999999999998 7999999999999
Q ss_pred EeCCCCcceeeecCCCCcceEEEEECC--CCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCCCEEEEE
Q psy11350 226 WSLDKDTPLANLEGHEPFRVSRIKFHP--SGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLGTC 298 (471)
Q Consensus 226 wd~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~~~ 298 (471)
||+.+++.+..+..|.. .|.+++|+| ++.++++++.|+.+.+|.. ...+.+| ...|.+++|+|++++|+++
T Consensus 684 wd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~s~ 761 (1249)
T 3sfz_A 684 WDSATGKLVHTYDEHSE-QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGH-TNSVNHCRFSPDDELLASC 761 (1249)
T ss_dssp EETTTCCEEEEEECCSS-CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCC-SSCEEEEEECSSTTEEEEE
T ss_pred EECCCCceEEEEcCCCC-cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCC-CCCEEEEEEecCCCEEEEE
Confidence 99999999999998877 899999999 5568999999999777543 3345566 5689999999999999999
Q ss_pred ecCCeEEEEECCCCcEEEEe-------------------------------------------------------eCCCC
Q psy11350 299 CWDHSWRLWDLNQGQEVLHQ-------------------------------------------------------EGHGK 323 (471)
Q Consensus 299 ~~dg~i~iwd~~~~~~~~~~-------------------------------------------------------~~~~~ 323 (471)
+.||+|++||+.+++....+ .+|..
T Consensus 762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 841 (1249)
T 3sfz_A 762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHS 841 (1249)
T ss_dssp ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSS
T ss_pred ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCC
Confidence 99999999999776543322 26788
Q ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 324 ~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
.|.+++|+|++.++++++.||.|++||+.++..+..+.+|...|.+++|+|+|.+|++++.||.|++||+.+
T Consensus 842 ~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp CCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 899999999999999999999999999999999999999999999999999999999999999999999764
No 53
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-36 Score=293.77 Aligned_cols=239 Identities=13% Similarity=0.150 Sum_probs=203.9
Q ss_pred eecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC--ceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEE
Q psy11350 148 QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC--ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL 225 (471)
Q Consensus 148 ~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 225 (471)
...|.++|++++|+|++++|++|+.||.|+|||+.++ +.+..+.+|...|.+++|+|++. +|++++.||+|++
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-----~l~s~s~d~~v~v 81 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSN-----RIVTCSQDRNAYV 81 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTC-----CEEEEETTSSEEE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCC-----EEEEEeCCCeEEE
Confidence 3457789999999999999999999999999999988 77888999999999999999987 6999999999999
Q ss_pred EeCCCCc---ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc--------cccccCCCCcceEEEEECCCCCE
Q psy11350 226 WSLDKDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP--------LANLEGHEPFRVSRIKFHPSGRF 294 (471)
Q Consensus 226 wd~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~--------~~~~~~~~~~~v~~l~~~~~~~~ 294 (471)
||+.++. ....+..|.. .|.+++|+|++++|++++.|+.+.++.. ...+...+...|.+++|+|++++
T Consensus 82 wd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLLRLNR-AATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp C------CCCCEEECCCCSS-CEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred EEcCCCCceeeeeEecccCC-ceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 9998877 5666666665 8999999999999999999999777532 34455523678999999999999
Q ss_pred EEEEecCCeEEEEECC------------------CCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCee
Q psy11350 295 LGTCCWDHSWRLWDLN------------------QGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356 (471)
Q Consensus 295 l~~~~~dg~i~iwd~~------------------~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~ 356 (471)
|++++.|++|++||+. .++++..+ +|...|++++|+|++++|++++.||.|++||+.++++
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 9999999999999985 34456666 8999999999999999999999999999999999987
Q ss_pred ----EEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11350 357 ----IMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 357 ----~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~ 394 (471)
+..+.+|...|.+++|+|++++|++|+.++.+ +|+..
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred cceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 77888999999999999999999998766665 67665
No 54
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2e-34 Score=284.36 Aligned_cols=306 Identities=21% Similarity=0.305 Sum_probs=247.6
Q ss_pred cceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCC
Q psy11350 142 LSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221 (471)
Q Consensus 142 ~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg 221 (471)
+.....+.||.+.|.. +++++|++|++|+.||.|++||+.+++.+..+.+|...|.+++|++ . ++++|+.||
T Consensus 108 ~~~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~-----~l~s~~~dg 179 (445)
T 2ovr_B 108 LKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--N-----IIISGSTDR 179 (445)
T ss_dssp CCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET--T-----EEEEEETTS
T ss_pred cceeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC--C-----EEEEEeCCC
Confidence 3345678899988643 3566789999999999999999999999999999999999999983 3 799999999
Q ss_pred cEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCCCEEE
Q psy11350 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLG 296 (471)
Q Consensus 222 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~ 296 (471)
+|++||+.+++.+..+..|.. .|.++.|+ +..+++++.|+.+.++.. ...+.+| ...|.++.| ++++++
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~ 253 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTS-TVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGH-VAAVRCVQY--DGRRVV 253 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSS-CEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECC-SSCEEEEEE--CSSCEE
T ss_pred eEEEEECCcCcEEEEECCCCC-cEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCC-cccEEEEEE--CCCEEE
Confidence 999999999999999988876 89999995 678999999999777543 3345555 568999999 688999
Q ss_pred EEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCC
Q psy11350 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG 376 (471)
Q Consensus 297 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~ 376 (471)
+++.||.|++||+++++.+..+.+|...|.+++| ++.++++|+.||.|++||+++++++..+.+|...+.++.++ +
T Consensus 254 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~ 329 (445)
T 2ovr_B 254 SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--D 329 (445)
T ss_dssp EEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--T
T ss_pred EEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--C
Confidence 9999999999999999999999999999999999 78899999999999999999999999999999999998884 6
Q ss_pred CEEEEEeCCCcEEEEECCCccchheecccCCCccc----------eeeccccceeeeecccCCCcccccchhhhcccccc
Q psy11350 377 YHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG----------VTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPI 446 (471)
Q Consensus 377 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~----------~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (471)
.+|++|+.||.|++||+++++++..+......... +++...|+.+.+|+.........+... ..-
T Consensus 330 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-----~~~ 404 (445)
T 2ovr_B 330 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTL-----ESG 404 (445)
T ss_dssp TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEEC-----TTG
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeeeecc-----ccC
Confidence 79999999999999999999998887654333223 333344455555554433211111000 001
Q ss_pred eeeecccceeeeecCCeEEEeecC
Q psy11350 447 PLLLDIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 447 ~~~~~~~~l~fs~dg~~lA~~~~~ 470 (471)
.....+..++|+|+|.+||+++.+
T Consensus 405 ~~~~~v~~~~~s~~~~~la~~~~d 428 (445)
T 2ovr_B 405 GSGGVVWRIRASNTKLVCAVGSRN 428 (445)
T ss_dssp GGTCEEEEEEECSSEEEEEEECSS
T ss_pred CCCceEEEEEecCCEEEEEEcccC
Confidence 223357889999999999998764
No 55
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-36 Score=298.74 Aligned_cols=244 Identities=11% Similarity=0.020 Sum_probs=197.4
Q ss_pred cCCcCeEEEEEecCC---------CEEEE-------------------EeCCCcEEEEeCCCCceE----EEeecCCCCE
Q psy11350 150 GDTRPISYCSFSPDS---------QHVAT-------------------ASWSGLCKLWTVPECELV----QTFRGHDCNV 197 (471)
Q Consensus 150 gh~~~V~~~~~s~~~---------~~l~t-------------------g~~dg~i~iwd~~~~~~~----~~~~~h~~~v 197 (471)
.+.++|.+++|+|++ ++||+ ++.|++|+||++.+++.. ..+.+|.+.|
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V 210 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEV 210 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSE
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcE
Confidence 367889999999886 56666 447789999999877642 4466788999
Q ss_pred EEEEEeeCCCC-CCccEEEEEeCCCcEEEEeCCCCcc-----------eeeecCCCCcceEEEEECCCCCEEEEEeCCCe
Q psy11350 198 GAIEFHPLPSE-GAVCSLASCAQDGSVKLWSLDKDTP-----------LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265 (471)
Q Consensus 198 ~~l~~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~ 265 (471)
.+++|+|.+.. ....+|++++.||+|+|||+.++.. ...+.+|.. .|.+++|++++ .|++|+.||.
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~-~v~sv~~s~~~-~lasgs~Dgt 288 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADS-LITTFDFLSPT-TVVCGFKNGF 288 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTT-CEEEEEESSSS-EEEEEETTSE
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCC-CEEEEEecCCC-eEEEEeCCCE
Confidence 99999997210 0012799999999999999977642 234556655 89999999864 8999999999
Q ss_pred EEecccc------ccccCCCCcceEEE--EECCCC-CEEEEEecCCeEEEEECCCCcEEEEeeCCCC--CeEEEEEeCCC
Q psy11350 266 WRLDTPL------ANLEGHEPFRVSRI--KFHPSG-RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK--PVYCMSFQGDG 334 (471)
Q Consensus 266 ~~~~~~~------~~~~~~~~~~v~~l--~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~v~~~~~s~d~ 334 (471)
+.+|... ..+.+| ...|.+| .|+|++ ++|++++.|++|+|||+++++++..+.+|.. .|.+++|+|++
T Consensus 289 V~lWD~~~~~~~~~~~~~H-~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~ 367 (524)
T 2j04_B 289 VAEFDLTDPEVPSFYDQVH-DSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQI 367 (524)
T ss_dssp EEEEETTBCSSCSEEEECS-SSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTT
T ss_pred EEEEECCCCCCceEEeecc-cccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCc
Confidence 7775432 235566 5689999 578887 8999999999999999999887766666653 58899999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy11350 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396 (471)
Q Consensus 335 ~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~ 396 (471)
..+++++.|++|++||++++.++..+.+|.+.|++++|+|+|++|++|+.||+|++||+..+
T Consensus 368 ~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 368 YSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp TEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred CeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 99999999999999999999988889999999999999999999999999999999998654
No 56
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=281.28 Aligned_cols=249 Identities=16% Similarity=0.243 Sum_probs=207.5
Q ss_pred eeeeecCCcCeEEEEEecCCCEE-EEEeC---CCcEEEEeCCCCceEEEe-ecCCCCEEEEEEeeCC---CCCCccEEEE
Q psy11350 145 YCSQVGDTRPISYCSFSPDSQHV-ATASW---SGLCKLWTVPECELVQTF-RGHDCNVGAIEFHPLP---SEGAVCSLAS 216 (471)
Q Consensus 145 ~~~~~gh~~~V~~~~~s~~~~~l-~tg~~---dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~~~~~---~~~~~~~l~s 216 (471)
...+.+|..+|.+++|+|++..+ ++|+. ||.|++||+.+++..... .+|...|.+++|+|++ . +|++
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----~l~~ 85 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQR-----YLAT 85 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTC-----CEEE
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCc-----eEEE
Confidence 34567899999999999999655 56665 899999999988876543 3789999999999983 5 6999
Q ss_pred EeCCCcEEEEeCCCCc-ceeeecCCCCcceEEEE------ECCCCCEEEEEeCCCeEEeccc------cccccC---CCC
Q psy11350 217 CAQDGSVKLWSLDKDT-PLANLEGHEPFRVSRIK------FHPSGRFLGTCCWDHSWRLDTP------LANLEG---HEP 280 (471)
Q Consensus 217 ~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~------~s~~~~~i~~~~~d~~~~~~~~------~~~~~~---~~~ 280 (471)
++.||.|++||+.+++ .+..+..|.. .|.++. |+|+++++++++.|+.+.++.. ...+.. +..
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 164 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVKGHKE-IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENK 164 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCSS-CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCC
T ss_pred ecCCCeEEEEeCCCCCccEEEEEeccc-ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCC
Confidence 9999999999999888 8888888776 899995 5789999999999999777543 223322 223
Q ss_pred cceEEEE----ECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeC---CCCEEEEEeCCCeEEEEeCCC
Q psy11350 281 FRVSRIK----FHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG---DGSVVATGGLDAFGRVWDLRT 353 (471)
Q Consensus 281 ~~v~~l~----~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~---d~~~l~t~~~dg~i~iwd~~~ 353 (471)
..+.+++ |+|++++|++++.||.|++||+++++... ...|...|.+++|+| ++.+|++++.||.|++||+++
T Consensus 165 ~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 243 (357)
T 3i2n_A 165 RDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT 243 (357)
T ss_dssp CCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE
T ss_pred CceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC
Confidence 4788888 78899999999999999999999987644 466889999999999 999999999999999999988
Q ss_pred CeeEEEec-----ccCcCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCccchh
Q psy11350 354 GRCIMFLE-----GHLKSVFSVDFSPDGY-HLATGSEDNAVKIWDLRKRRLLK 400 (471)
Q Consensus 354 ~~~~~~~~-----~h~~~v~~~~~sp~~~-~l~s~s~dg~i~iwd~~~~~~~~ 400 (471)
++++..+. +|...|++++|+|++. +|++|+.||.|++||++.+....
T Consensus 244 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 296 (357)
T 3i2n_A 244 QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRS 296 (357)
T ss_dssp EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC-
T ss_pred CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccc
Confidence 76554444 8999999999999998 89999999999999998776543
No 57
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2e-34 Score=273.75 Aligned_cols=249 Identities=14% Similarity=0.122 Sum_probs=212.3
Q ss_pred eecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc---eEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEE
Q psy11350 148 QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE---LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 148 ~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 224 (471)
..+|...|++++|+|++++|++|+.||.|++|++.++. ....+.+|...|.+++|+|++.. +|++++.||.|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~l~~~~~dg~i~ 82 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDL----QIYVGTVQGEIL 82 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSE----EEEEEETTSCEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCc----EEEEEcCCCeEE
Confidence 45899999999999999999999999999999998877 34556689999999999998751 389999999999
Q ss_pred EEeC-CCCcceeeecC--CCCcceEEEEECCCCCEEEEEeCCCeEEeccccc------------cccCCCCcceEEEEEC
Q psy11350 225 LWSL-DKDTPLANLEG--HEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA------------NLEGHEPFRVSRIKFH 289 (471)
Q Consensus 225 iwd~-~~~~~~~~~~~--~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~------------~~~~~~~~~v~~l~~~ 289 (471)
+||+ .+++. ..+.. |.. .|.+++|+| +.++++++.|+.+.++.... .........|.+++|+
T Consensus 83 ~wd~~~~~~~-~~~~~~~~~~-~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 159 (342)
T 1yfq_A 83 KVDLIGSPSF-QALTNNEANL-GICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN 159 (342)
T ss_dssp EECSSSSSSE-EECBSCCCCS-CEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC
T ss_pred EEEeccCCce-EeccccCCCC-ceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEec
Confidence 9999 77754 55555 555 899999999 99999999999977754321 1111235689999999
Q ss_pred CCCCEEEEEecCCeEEEEECCC-Cc--EEEEeeCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEeCCCC------eeEEE
Q psy11350 290 PSGRFLGTCCWDHSWRLWDLNQ-GQ--EVLHQEGHGKPVYCMSFQG-DGSVVATGGLDAFGRVWDLRTG------RCIMF 359 (471)
Q Consensus 290 ~~~~~l~~~~~dg~i~iwd~~~-~~--~~~~~~~~~~~v~~~~~s~-d~~~l~t~~~dg~i~iwd~~~~------~~~~~ 359 (471)
|++ +++++.|+.|++||+++ +. .......|...+.+++|+| ++.++++++.||.|++|+++.. +....
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred CCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 987 99999999999999998 54 3345567889999999999 9999999999999999999887 77888
Q ss_pred ecccCc---------CEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheeccc
Q psy11350 360 LEGHLK---------SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 360 ~~~h~~---------~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 405 (471)
+..|.. .|.+++|+|++++|++|+.||.|++||+.+++++..+..+
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 292 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF 292 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcc
Confidence 888865 9999999999999999999999999999999888766543
No 58
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-35 Score=289.99 Aligned_cols=313 Identities=15% Similarity=0.163 Sum_probs=231.2
Q ss_pred eeeee-ecCCcCeEEEEEec-CCCEEEEEeCCCcEEEEeCCC---Cc---eEEEeecCCCCEEEEEEeeCCCCCCccEEE
Q psy11350 144 IYCSQ-VGDTRPISYCSFSP-DSQHVATASWSGLCKLWTVPE---CE---LVQTFRGHDCNVGAIEFHPLPSEGAVCSLA 215 (471)
Q Consensus 144 ~~~~~-~gh~~~V~~~~~s~-~~~~l~tg~~dg~i~iwd~~~---~~---~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~ 215 (471)
....+ .+|.++|++++|+| ++++|++|+.||.|+|||+.+ +. ....+ .|...|.+++|+|++. +|+
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~-----~l~ 127 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFD-----AFA 127 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSS-----EEE
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCC-----EEE
Confidence 34445 78999999999999 999999999999999999876 33 23333 5899999999999887 799
Q ss_pred EEeCCCcEEEEeCC---CCcceeeecCC-----------CCcceEEEE--ECCCCCEEEEEeCCCeEEeccc-----ccc
Q psy11350 216 SCAQDGSVKLWSLD---KDTPLANLEGH-----------EPFRVSRIK--FHPSGRFLGTCCWDHSWRLDTP-----LAN 274 (471)
Q Consensus 216 s~~~dg~i~iwd~~---~~~~~~~~~~~-----------~~~~v~~~~--~s~~~~~i~~~~~d~~~~~~~~-----~~~ 274 (471)
+++.||+|++||+. +++....+..+ ....+.++. +++++.++++++.|+.+.++.. ...
T Consensus 128 s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 207 (437)
T 3gre_A 128 VSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQI 207 (437)
T ss_dssp EEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEE
Confidence 99999999999994 45443332211 223566666 6789999999999999777543 334
Q ss_pred ccCC-CCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee-CCCCCeEEEEEeC----CCCEEEEEeCCCeEEE
Q psy11350 275 LEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GHGKPVYCMSFQG----DGSVVATGGLDAFGRV 348 (471)
Q Consensus 275 ~~~~-~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~----d~~~l~t~~~dg~i~i 348 (471)
+..+ +...|++++|+|++++|++|+.||+|++||+++++++..+. .|..+|++++|+| ++.+|++|+.||.|++
T Consensus 208 ~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~i 287 (437)
T 3gre_A 208 IENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTI 287 (437)
T ss_dssp EECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEE
T ss_pred EccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEE
Confidence 4442 25689999999999999999999999999999999988876 7888999996654 6779999999999999
Q ss_pred EeCCCCeeEEEecc--------------------------cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchhee
Q psy11350 349 WDLRTGRCIMFLEG--------------------------HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 349 wd~~~~~~~~~~~~--------------------------h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
||+++++++..+.+ |...|++++|+ ++++|++|+.||.|++||+.+++++..+
T Consensus 288 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 366 (437)
T 3gre_A 288 WNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAV 366 (437)
T ss_dssp EETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEE
T ss_pred EEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEE
Confidence 99999998877764 44568889999 7789999999999999999999999888
Q ss_pred cccCCCccceeeccccceeeeecccCCCcccccchhhhcccccc-eeeecccceeeeec--CCeEEEeecC
Q psy11350 403 TQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPI-PLLLDIQKLTFKFD--SDLHAMVLNQ 470 (471)
Q Consensus 403 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~fs~d--g~~lA~~~~~ 470 (471)
..+.................+.... +........... .....+..++|+++ +.+|+.++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~d 430 (437)
T 3gre_A 367 ISPSRFSDVFIPTQVTANLTMLLRK-------MKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNS 430 (437)
T ss_dssp ECC--CCCEEEEEEEETTEEEEEEE-------CC-------------CCCEEEEEEEESSSSEEEEEEETT
T ss_pred ecccccCceEEEEEeecceEEEEEe-------cccccccccCcccccccceeeEeeeccCCceEEEEEcCC
Confidence 7654333222222221111111100 000001111111 12345788899998 7788887764
No 59
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.8e-35 Score=281.95 Aligned_cols=249 Identities=20% Similarity=0.262 Sum_probs=210.7
Q ss_pred eeecCCcCeEEEEEecC----CCEEEEEeCCCcEEEEeCCCCceEEEeec-----CCCCEEEEEEeeCCCCCCccEEEEE
Q psy11350 147 SQVGDTRPISYCSFSPD----SQHVATASWSGLCKLWTVPECELVQTFRG-----HDCNVGAIEFHPLPSEGAVCSLASC 217 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~----~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~~~~~~~~l~s~ 217 (471)
...+|..+|++++|+|+ ...+++++.++.|++||+.+++.+..+.. |...|.+++|+|++.... .+|++|
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~ 91 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSH-PLLAVA 91 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCC-EEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCC-CEEEEe
Confidence 44589999999999984 45566666688999999998887776664 567899999999943111 179999
Q ss_pred eCCCcEEEEeCCCCcceeeecCCCCcceEEEEECC-CCCEEEEEeCCCeEEeccc-----cccc---cCCCCcceEEEEE
Q psy11350 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLDTP-----LANL---EGHEPFRVSRIKF 288 (471)
Q Consensus 218 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~i~~~~~d~~~~~~~~-----~~~~---~~~~~~~v~~l~~ 288 (471)
+.||.|++||+.+++.+..+..|.. .|.+++|+| ++.++++++.|+.+.++.. ...+ ..| ...|.+++|
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~ 169 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGN-AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGH-RDEVLSADY 169 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCS-CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSC-SSCEEEEEE
T ss_pred cCCCEEEEEEchhceEeeeecCCCC-cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccc-cCceeEEEE
Confidence 9999999999999999999988776 899999999 9999999999999777543 2223 344 668999999
Q ss_pred CCCCCEEEEEecCCeEEEEECCCCcEEEEe----------------------------eCCCCCeEEEEEeCCCCEEEEE
Q psy11350 289 HPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ----------------------------EGHGKPVYCMSFQGDGSVVATG 340 (471)
Q Consensus 289 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~----------------------------~~~~~~v~~~~~s~d~~~l~t~ 340 (471)
+|++++|++++.||.|++||+++++....+ .+|...|.+++|+ +.+|+++
T Consensus 170 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~ 247 (366)
T 3k26_A 170 DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSK 247 (366)
T ss_dssp CTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEE
T ss_pred CCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEE
Confidence 999999999999999999999977544332 3399999999998 6799999
Q ss_pred eCCCeEEEEeCCCCee--------------EEEecccCcCEEEEEEcCC--CCEEEEEeCCCcEEEEECCCccchh
Q psy11350 341 GLDAFGRVWDLRTGRC--------------IMFLEGHLKSVFSVDFSPD--GYHLATGSEDNAVKIWDLRKRRLLK 400 (471)
Q Consensus 341 ~~dg~i~iwd~~~~~~--------------~~~~~~h~~~v~~~~~sp~--~~~l~s~s~dg~i~iwd~~~~~~~~ 400 (471)
+.|+.|++||+.++.. +..+.+|...|++++|+|+ +++|++|+.||.|++||+.+++++.
T Consensus 248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 323 (366)
T 3k26_A 248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHK 323 (366)
T ss_dssp CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGG
T ss_pred ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcc
Confidence 9999999999987643 7788899999999999999 9999999999999999999987664
No 60
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-35 Score=310.81 Aligned_cols=248 Identities=21% Similarity=0.285 Sum_probs=212.9
Q ss_pred eeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCC--CCceEEEeecCCCCEEEEEEeeC--CCCCCccEEEEEeCCC
Q psy11350 146 CSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVP--ECELVQTFRGHDCNVGAIEFHPL--PSEGAVCSLASCAQDG 221 (471)
Q Consensus 146 ~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~l~~~~~--~~~~~~~~l~s~~~dg 221 (471)
..+.||.++|++++|+|++++|++|+.||.|+|||+. +++.+..+.+|..+|++++|+|+ +. +|++|+.||
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~-----~l~s~s~Dg 77 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-----ILASCSYDG 77 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCS-----EEEEEETTS
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCC-----EEEEEeCCC
Confidence 3567999999999999999999999999999999997 56778889999999999999987 65 799999999
Q ss_pred cEEEEeCCCCc--ceeeecCCCCcceEEEEECCC--CCEEEEEeCCCeEEecccc-------ccccCCCCcceEEEEECC
Q psy11350 222 SVKLWSLDKDT--PLANLEGHEPFRVSRIKFHPS--GRFLGTCCWDHSWRLDTPL-------ANLEGHEPFRVSRIKFHP 290 (471)
Q Consensus 222 ~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~s~~--~~~i~~~~~d~~~~~~~~~-------~~~~~~~~~~v~~l~~~~ 290 (471)
.|++||+.+++ .+..+..|.. .|.+++|+|+ +.++++++.|+.+.++... ..+.+| ...|.+++|+|
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~-~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~-~~~v~~l~~~p 155 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSA-SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH-AIGVNSASWAP 155 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSS-CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC-SSCEEEEEECC
T ss_pred eEEEEECCCCcccccccccCCCC-CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC-CCceEEEEecC
Confidence 99999998886 6666776766 8999999999 9999999999997775432 223344 56899999999
Q ss_pred -------------CCCEEEEEecCCeEEEEECCCC----cEEEEeeCCCCCeEEEEEeCC---CCEEEEEeCCCeEEEEe
Q psy11350 291 -------------SGRFLGTCCWDHSWRLWDLNQG----QEVLHQEGHGKPVYCMSFQGD---GSVVATGGLDAFGRVWD 350 (471)
Q Consensus 291 -------------~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~s~d---~~~l~t~~~dg~i~iwd 350 (471)
++.+|++|+.||+|++||++++ .....+.+|..+|++++|+|+ +.+|++|+.||.|++||
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp CC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred cccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 5899999999999999999877 456678899999999999999 89999999999999999
Q ss_pred CCCCe-----eEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchh
Q psy11350 351 LRTGR-----CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400 (471)
Q Consensus 351 ~~~~~-----~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 400 (471)
++++. .+.....|...|++++|+|+|.+|++|+.||.|++||+..+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~~~ 290 (753)
T 3jro_A 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWE 290 (753)
T ss_dssp ESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSCCB
T ss_pred CCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCCcc
Confidence 98864 333445688999999999999999999999999999998655433
No 61
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.3e-34 Score=275.04 Aligned_cols=194 Identities=14% Similarity=0.110 Sum_probs=164.4
Q ss_pred CCEEEEEEeeCCCCCCccEEE--EEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc
Q psy11350 195 CNVGAIEFHPLPSEGAVCSLA--SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL 272 (471)
Q Consensus 195 ~~v~~l~~~~~~~~~~~~~l~--s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~ 272 (471)
..+.+++|+|++. +++ +++.|++|+|||+.+++++..+..+. .|.+++|+|+|+++++++.++...++...
T Consensus 134 ~~~~~v~fSpDg~-----~la~as~~~d~~i~iwd~~~~~~~~~~~~~~--~V~~v~fspdg~~l~s~s~~~~~~~~~~~ 206 (365)
T 4h5i_A 134 DYTKLVYISREGT-----VAAIASSKVPAIMRIIDPSDLTEKFEIETRG--EVKDLHFSTDGKVVAYITGSSLEVISTVT 206 (365)
T ss_dssp CCEEEEEECTTSS-----CEEEEESCSSCEEEEEETTTTEEEEEEECSS--CCCEEEECTTSSEEEEECSSCEEEEETTT
T ss_pred cCEEEEEEcCCCC-----EEEEEECCCCCEEEEeECCCCcEEEEeCCCC--ceEEEEEccCCceEEeccceeEEEEEecc
Confidence 3477899999998 454 45578999999999999888886433 79999999999999999988775543221
Q ss_pred ------ccccCCCCcceEEEEECCCCCEEEEEecCC----eEEEEECCCCcE----EEEeeCCCCCeEEEEEeCCCCEEE
Q psy11350 273 ------ANLEGHEPFRVSRIKFHPSGRFLGTCCWDH----SWRLWDLNQGQE----VLHQEGHGKPVYCMSFQGDGSVVA 338 (471)
Q Consensus 273 ------~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----~i~iwd~~~~~~----~~~~~~~~~~v~~~~~s~d~~~l~ 338 (471)
.....| ...|.+++|+|+++++++++.|+ .+++|++..... ...+.+|..+|++++|+|||++|+
T Consensus 207 ~~~~~~~~~~~~-~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~la 285 (365)
T 4h5i_A 207 GSCIARKTDFDK-NWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAV 285 (365)
T ss_dssp CCEEEEECCCCT-TEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEE
T ss_pred CcceeeeecCCC-CCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceE
Confidence 122333 56799999999999999999887 688999877653 345778999999999999999999
Q ss_pred EEeCCCeEEEEeCCCCeeEEEe-cccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy11350 339 TGGLDAFGRVWDLRTGRCIMFL-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396 (471)
Q Consensus 339 t~~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~ 396 (471)
+|+.|++|+|||+++++++..+ .+|...|++++|+|||++|+|||.|++|+|||+..+
T Consensus 286 sgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 286 LASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999999999999999875 789999999999999999999999999999999654
No 62
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-34 Score=281.52 Aligned_cols=238 Identities=19% Similarity=0.284 Sum_probs=214.1
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCC
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD 229 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 229 (471)
+|...|++++|+|++++|++|+.||.|++|| .+++.+..+..|...|.+++|+|++. +|++++.||.|++||+.
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGT-----HIISMDVENVTILWNVI 179 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSS-----EEEEEETTCCEEEEETT
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCC-----EEEEEecCCeEEEEECC
Confidence 3788999999999999999999999999999 77889999999999999999999988 79999999999999999
Q ss_pred CCcceeeecCCCCcc---------------eEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEEC
Q psy11350 230 KDTPLANLEGHEPFR---------------VSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFH 289 (471)
Q Consensus 230 ~~~~~~~~~~~~~~~---------------v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~ 289 (471)
+++.+..+..+.. . +.++.|+|++ .+++++.++.+.++.. ...+..| ...|.+++|+
T Consensus 180 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~-~~~i~~~~~~ 256 (425)
T 1r5m_A 180 SGTVMQHFELKET-GGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGH-HGPISVLEFN 256 (425)
T ss_dssp TTEEEEEECCC----------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCC-SSCEEEEEEE
T ss_pred CCcEEEEeecccc-CccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccC-CCceEEEEEC
Confidence 9998888876654 3 8899999985 4788888888666432 3344455 5689999999
Q ss_pred CCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEE
Q psy11350 290 PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFS 369 (471)
Q Consensus 290 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 369 (471)
|++++|++++.||.|++||+++++.+..+.+|...|.+++|+|++ ++++++.|+.|++||+++++++..+..|...|.+
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 335 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFA 335 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEE
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCcc
Q psy11350 370 VDFSPDGYHLATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 370 ~~~sp~~~~l~s~s~dg~i~iwd~~~~~ 397 (471)
++|+|++++|++++.||.|++||+++++
T Consensus 336 ~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 336 GRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 9999999999999999999999999877
No 63
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.8e-34 Score=294.63 Aligned_cols=271 Identities=20% Similarity=0.226 Sum_probs=234.3
Q ss_pred ecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC----ceEEEeecCCCC-EEEEEEee--CCCCCCccEEEEEeCCC
Q psy11350 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC----ELVQTFRGHDCN-VGAIEFHP--LPSEGAVCSLASCAQDG 221 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~----~~~~~~~~h~~~-v~~l~~~~--~~~~~~~~~l~s~~~dg 221 (471)
..|.+.|++++|+|+|++|++++ ++.|++||+.++ +....+.+|... |.+++|+| ++. +|++++.||
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~-----~l~s~~~dg 88 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ-----YLCSGDESG 88 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCC-----EEEEEETTS
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCC-----EEEEecCCC
Confidence 36899999999999999999999 899999999999 899999999999 99999999 888 899999999
Q ss_pred cEEEEeCCCC--------cceeeecCCCCcceEEEEECCCCCEEEEEeCC----CeEEecc---ccccccCCCCcceEEE
Q psy11350 222 SVKLWSLDKD--------TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD----HSWRLDT---PLANLEGHEPFRVSRI 286 (471)
Q Consensus 222 ~i~iwd~~~~--------~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d----~~~~~~~---~~~~~~~~~~~~v~~l 286 (471)
.|++||+.++ .....+..+.. .|.+++|+|+++++++++.+ +.+.++. ....+.+| ...|.++
T Consensus 89 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~v~~~ 166 (615)
T 1pgu_A 89 KVIVWGWTFDKESNSVEVNVKSEFQVLAG-PISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGH-SQRINAC 166 (615)
T ss_dssp EEEEEEEEEEGGGTEEEEEEEEEEECCSS-CEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSC-SSCEEEE
T ss_pred EEEEEeCCCCcccccccccccchhhcccc-cEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecC-CccEEEE
Confidence 9999999754 56666776665 89999999999999999988 4555543 33445566 5689999
Q ss_pred EECCCCC-EEEEEecCCeEEEEECCCCcEEEEeeCCCC---CeEEEEEeCC-CCEEEEEeCCCeEEEEeCCCCeeEEEe-
Q psy11350 287 KFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEGHGK---PVYCMSFQGD-GSVVATGGLDAFGRVWDLRTGRCIMFL- 360 (471)
Q Consensus 287 ~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---~v~~~~~s~d-~~~l~t~~~dg~i~iwd~~~~~~~~~~- 360 (471)
+|+|+++ .|++++.|+.|++||+.+++.+..+.+|.. .|++++|+|+ +++|++++.||.|++||+++++.+..+
T Consensus 167 ~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 246 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIE 246 (615)
T ss_dssp EECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECC
T ss_pred EECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEec
Confidence 9999998 899999999999999999999999999999 9999999999 999999999999999999999999998
Q ss_pred c---ccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccC-C-----------Cccceeeccccceeeeec
Q psy11350 361 E---GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLL-P-----------NSIGVTSLLTDLYIDVLE 425 (471)
Q Consensus 361 ~---~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~-----------~~~~~~~~~~d~~~~~~~ 425 (471)
. +|...|.+++|+ ++.+|++++.||.|++||+++++.+..+.... + ....+++...+..+.+|+
T Consensus 247 ~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d 325 (615)
T 1pgu_A 247 DDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYE 325 (615)
T ss_dssp BTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEE
T ss_pred ccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEE
Confidence 6 899999999999 99999999999999999999999887776541 1 222334444556666665
Q ss_pred ccC
Q psy11350 426 SLN 428 (471)
Q Consensus 426 ~~~ 428 (471)
...
T Consensus 326 ~~~ 328 (615)
T 1pgu_A 326 LGH 328 (615)
T ss_dssp TTE
T ss_pred CCC
Confidence 443
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-35 Score=284.90 Aligned_cols=246 Identities=17% Similarity=0.264 Sum_probs=214.8
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCC----CceEEEeecCCCCEEEEEEeeC-CCCCCccEEEEEeCCCcEE
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE----CELVQTFRGHDCNVGAIEFHPL-PSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~~~~-~~~~~~~~l~s~~~dg~i~ 224 (471)
+|...|.+++|+|++++|++|+.||.|++||+.+ .+.+..+.+|...|.+++|+|+ +. +|++++.||.|+
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-----~l~s~~~dg~v~ 139 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDN-----VLASGGNNGEIF 139 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTT-----BEEEECSSSCEE
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCC-----EEEEEcCCCeEE
Confidence 6899999999999999999999999999999987 4588889999999999999998 55 799999999999
Q ss_pred EEeCCCCc------ceeee---cCCCCcceEEEEECCC-CCEEEEEeCCCeEEeccc-----cccccCCC-----CcceE
Q psy11350 225 LWSLDKDT------PLANL---EGHEPFRVSRIKFHPS-GRFLGTCCWDHSWRLDTP-----LANLEGHE-----PFRVS 284 (471)
Q Consensus 225 iwd~~~~~------~~~~~---~~~~~~~v~~~~~s~~-~~~i~~~~~d~~~~~~~~-----~~~~~~~~-----~~~v~ 284 (471)
+||+.+++ ....+ ..+.. .|.+++|+|+ +.++++++.|+.+.++.. ...+..+. ...|.
T Consensus 140 iwd~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~ 218 (416)
T 2pm9_A 140 IWDMNKCTESPSNYTPLTPGQSMSSVD-EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLS 218 (416)
T ss_dssp BCBTTTTSSCTTTCCCBCCCCSCCSSC-CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEE
T ss_pred EEECCCCccccccccccccccccCCCC-CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceE
Confidence 99998876 33222 34444 8999999999 789999999999777543 22333332 56799
Q ss_pred EEEECCCC-CEEEEEecCC---eEEEEECCCC-cEEEEee-CCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEeCCCCeeE
Q psy11350 285 RIKFHPSG-RFLGTCCWDH---SWRLWDLNQG-QEVLHQE-GHGKPVYCMSFQG-DGSVVATGGLDAFGRVWDLRTGRCI 357 (471)
Q Consensus 285 ~l~~~~~~-~~l~~~~~dg---~i~iwd~~~~-~~~~~~~-~~~~~v~~~~~s~-d~~~l~t~~~dg~i~iwd~~~~~~~ 357 (471)
+++|+|++ .+|++++.|+ .|++||++++ .++..+. +|...|++++|+| ++.+|++++.||.|++||+++++++
T Consensus 219 ~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 219 VVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp EEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred EEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 99999997 6899999998 9999999986 5667777 8999999999999 9999999999999999999999999
Q ss_pred EEecccCcCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCccchhe
Q psy11350 358 MFLEGHLKSVFSVDFSPDG-YHLATGSEDNAVKIWDLRKRRLLKW 401 (471)
Q Consensus 358 ~~~~~h~~~v~~~~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~~ 401 (471)
..+.+|...|.+++|+|++ .+|++++.||.|++||+.+++....
T Consensus 299 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 343 (416)
T 2pm9_A 299 SQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLD 343 (416)
T ss_dssp EEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSC
T ss_pred eeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcc
Confidence 9999999999999999998 8999999999999999998775543
No 65
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.9e-35 Score=278.82 Aligned_cols=237 Identities=22% Similarity=0.356 Sum_probs=208.3
Q ss_pred cCCcCeEEEEEecC----CCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEee-CCCCCCccEEEEEeCCCcEE
Q psy11350 150 GDTRPISYCSFSPD----SQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP-LPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 150 gh~~~V~~~~~s~~----~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~~~~~l~s~~~dg~i~ 224 (471)
.|...|++++|+|+ +.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++. +|++++.||.|+
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~l~s~~~dg~i~ 141 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPN-----LLLSVSKDHALR 141 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTT-----EEEEEETTSCEE
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCC-----EEEEEeCCCeEE
Confidence 37889999999999 67999999999999999999999999999999999999999 666 899999999999
Q ss_pred EEeCCCCcceeee---cCCCCcceEEEEECCCCCEEEEEeCCCeEEecccccc-----cc--------------------
Q psy11350 225 LWSLDKDTPLANL---EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN-----LE-------------------- 276 (471)
Q Consensus 225 iwd~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~-----~~-------------------- 276 (471)
+||+.+++.+..+ ..+.. .|.+++|+|++.++++++.|+.+.++..... +.
T Consensus 142 iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (366)
T 3k26_A 142 LWNIQTDTLVAIFGGVEGHRD-EVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIH 220 (366)
T ss_dssp EEETTTTEEEEEECSTTSCSS-CEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEEC
T ss_pred EEEeecCeEEEEecccccccC-ceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeec
Confidence 9999999888887 45554 8999999999999999999999777543211 11
Q ss_pred --------CCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcE--------------EEEeeCCCCCeEEEEEeCC-
Q psy11350 277 --------GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE--------------VLHQEGHGKPVYCMSFQGD- 333 (471)
Q Consensus 277 --------~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~--------------~~~~~~~~~~v~~~~~s~d- 333 (471)
.| ...|.+++|+ +++|++++.||.|++||+.++.. +..+..|...|++++|+|+
T Consensus 221 ~~~~~~~~~~-~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 297 (366)
T 3k26_A 221 FPDFSTRDIH-RNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF 297 (366)
T ss_dssp CCSEEECSSC-SSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECT
T ss_pred cCccccccCC-cceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCC
Confidence 14 5679999998 77999999999999999987644 7778899999999999999
Q ss_pred -CCEEEEEeCCCeEEEEeCCCCe----eEEEeccc--CcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 334 -GSVVATGGLDAFGRVWDLRTGR----CIMFLEGH--LKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 334 -~~~l~t~~~dg~i~iwd~~~~~----~~~~~~~h--~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
+++|++|+.||.|++||+.+++ ....+.+| ...|++++|+|++++|++++.||.|++||+.+
T Consensus 298 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 298 WQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp TSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 9999999999999999999875 44477777 78999999999999999999999999999863
No 66
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.9e-34 Score=315.09 Aligned_cols=310 Identities=22% Similarity=0.308 Sum_probs=252.6
Q ss_pred eeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcE
Q psy11350 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 223 (471)
....+.+|...|.+++|+|+|++|++|+.||.|+|||+.+++.+..+.+|...|.+++|+|++.. .++++|+.||.|
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~l~sg~~d~~v 725 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNH---LLLATGSNDFFL 725 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSC---CEEEEEETTSCE
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCc---eEEEEEeCCCeE
Confidence 34566799999999999999999999999999999999999999999999999999999995431 178999999999
Q ss_pred EEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccccc-----------------------------
Q psy11350 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN----------------------------- 274 (471)
Q Consensus 224 ~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~----------------------------- 274 (471)
++||+.+++++..+.+|.. .|.+++|+|+++++++++.|+.+.+|.....
T Consensus 726 ~vwd~~~~~~~~~~~~h~~-~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 804 (1249)
T 3sfz_A 726 KLWDLNQKECRNTMFGHTN-SVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCC 804 (1249)
T ss_dssp EEEETTSSSEEEEECCCSS-CEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCC
T ss_pred EEEECCCcchhheecCCCC-CEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEE
Confidence 9999999999999998887 8999999999999999999998666432100
Q ss_pred ------------------------------ccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCC
Q psy11350 275 ------------------------------LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324 (471)
Q Consensus 275 ------------------------------~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 324 (471)
+...+...|.+++|+|+++++++++.||.|++||+.++..+..+.+|...
T Consensus 805 ~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~ 884 (1249)
T 3sfz_A 805 SWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSW 884 (1249)
T ss_dssp CBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSC
T ss_pred EECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccc
Confidence 00022457889999999999999999999999999999999999999999
Q ss_pred eEEEEEeCCCCEEEEEeCCCeEEEEeCC----------------------------------------------------
Q psy11350 325 VYCMSFQGDGSVVATGGLDAFGRVWDLR---------------------------------------------------- 352 (471)
Q Consensus 325 v~~~~~s~d~~~l~t~~~dg~i~iwd~~---------------------------------------------------- 352 (471)
|++++|+|++.+|++++.||.|++||+.
T Consensus 885 v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 964 (1249)
T 3sfz_A 885 VHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQV 964 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCE
T ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcE
Confidence 9999999999999999999988888743
Q ss_pred ---------------------------CCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheeccc
Q psy11350 353 ---------------------------TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 353 ---------------------------~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 405 (471)
+++.+..+.+|...|++++|+|+|++|++++.||.|++||+.+++.+....
T Consensus 965 ~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~-- 1042 (1249)
T 3sfz_A 965 SCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQA-- 1042 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBC--
T ss_pred EEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEec--
Confidence 233445566789999999999999999999999999999999988764321
Q ss_pred CCCc---------cceeeccccceeeeecccCCCcccccchhhhcccccce-eeecccceeeeecCCeEEEeecC
Q psy11350 406 LPNS---------IGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPIP-LLLDIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 406 ~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~fs~dg~~lA~~~~~ 470 (471)
+... ..+++...+..+.+|+....... ..+. ....+..++|+|||++||+++.+
T Consensus 1043 ~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~-----------~~~~~~~~~v~~~~~s~d~~~l~s~s~d 1106 (1249)
T 3sfz_A 1043 HQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIE-----------RDFTCHQGTVLSCAISSDATKFSSTSAD 1106 (1249)
T ss_dssp CSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCC-----------EEEECCSSCCCCEEECSSSSSCEEECCS
T ss_pred CCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCcee-----------EEEcccCCcEEEEEECCCCCEEEEEcCC
Confidence 1222 23344455556666655443322 1222 23357889999999999998765
No 67
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.8e-34 Score=279.96 Aligned_cols=249 Identities=19% Similarity=0.281 Sum_probs=216.7
Q ss_pred ceeeeeecCCcCeEEEEEecC----C---CEEEEEeCCCcEEEEeCCCCce-----EEEeecC-----CCCEEEEEEe--
Q psy11350 143 SIYCSQVGDTRPISYCSFSPD----S---QHVATASWSGLCKLWTVPECEL-----VQTFRGH-----DCNVGAIEFH-- 203 (471)
Q Consensus 143 ~~~~~~~gh~~~V~~~~~s~~----~---~~l~tg~~dg~i~iwd~~~~~~-----~~~~~~h-----~~~v~~l~~~-- 203 (471)
.....+.+|..+|++++|+|+ + ++|++++.||.|++|++.+++. ...+..| ...|.+++|+
T Consensus 53 ~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 132 (397)
T 1sq9_A 53 DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGAS 132 (397)
T ss_dssp GGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECC
T ss_pred CcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeec
Confidence 345667799999999999999 9 9999999999999999998887 8888888 5999999999
Q ss_pred --eCCCCCCccE-EEEEeCCCcEEEEeCCC------Cccee-----eecC------CCCcceEEEEECCCCCEEEEEeCC
Q psy11350 204 --PLPSEGAVCS-LASCAQDGSVKLWSLDK------DTPLA-----NLEG------HEPFRVSRIKFHPSGRFLGTCCWD 263 (471)
Q Consensus 204 --~~~~~~~~~~-l~s~~~dg~i~iwd~~~------~~~~~-----~~~~------~~~~~v~~~~~s~~~~~i~~~~~d 263 (471)
|++. + |++++.||.|++||+.+ ++.+. .+.. .....+.+++|+|++ ++++++.|
T Consensus 133 ~~~~~~-----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d 206 (397)
T 1sq9_A 133 NDRLLS-----HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN 206 (397)
T ss_dssp C----C-----EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT
T ss_pred cCCCCc-----eEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC
Confidence 8887 7 99999999999999988 66665 6632 223389999999999 99999999
Q ss_pred CeEEeccc-----cccccC---C--CCcceEEEEECCCCCEEEEEecC---CeEEEEECCCCcEEEEeeC----------
Q psy11350 264 HSWRLDTP-----LANLEG---H--EPFRVSRIKFHPSGRFLGTCCWD---HSWRLWDLNQGQEVLHQEG---------- 320 (471)
Q Consensus 264 ~~~~~~~~-----~~~~~~---~--~~~~v~~l~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~---------- 320 (471)
+.+.++.. ...+.. | ....|.+++|+|++++|++++.| |.|++||+++++.+..+.+
T Consensus 207 g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 286 (397)
T 1sq9_A 207 GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLG 286 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------C
T ss_pred CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccc
Confidence 99777543 233444 3 04579999999999999999999 9999999999999999988
Q ss_pred ---CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec------cc---------------CcCEEEEEEcCCC
Q psy11350 321 ---HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE------GH---------------LKSVFSVDFSPDG 376 (471)
Q Consensus 321 ---~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~------~h---------------~~~v~~~~~sp~~ 376 (471)
|...|.+++|+|++.+|++++.||.|++||+++++++..+. +| ...|++++|+|++
T Consensus 287 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 287 EFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp CBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred ccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 99999999999999999999999999999999999999998 88 9999999999998
Q ss_pred ----------CEEEEEeCCCcEEEEECCCcc
Q psy11350 377 ----------YHLATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 377 ----------~~l~s~s~dg~i~iwd~~~~~ 397 (471)
++|++|+.||.|++||+.+++
T Consensus 367 ~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 367 WRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998764
No 68
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.9e-33 Score=275.34 Aligned_cols=246 Identities=20% Similarity=0.343 Sum_probs=210.9
Q ss_pred eeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEE
Q psy11350 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 226 (471)
.+.+|...|++++|+|+|++||+|+.||.|+|||+.+++.+..+.+|...+.+++|++. +|++|+.|+.+++|
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~-------~l~sgs~d~~i~~~ 214 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSY-------ILSSGSRSGHIHHH 214 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT-------EEEEEETTSEEEEE
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCC-------EEEEEeCCCceeEe
Confidence 44578899999999999999999999999999999999999999999999999988643 79999999999999
Q ss_pred eCCCCc-ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc---------cccccCCCCcceEEEEECCCCC-EE
Q psy11350 227 SLDKDT-PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP---------LANLEGHEPFRVSRIKFHPSGR-FL 295 (471)
Q Consensus 227 d~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~---------~~~~~~~~~~~v~~l~~~~~~~-~l 295 (471)
|..... .+..+..|.. .+..+.|+|++.++++++.|+.+.++.. ......| ...|.+++|+|.+. .+
T Consensus 215 d~~~~~~~~~~~~~h~~-~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~-~~~V~~~~~~p~~~~~l 292 (420)
T 4gga_A 215 DVRVAEHHVATLSGHSQ-EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH-QGAVKAVAWCPWQSNVL 292 (420)
T ss_dssp ETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCC-SSCEEEEEECTTCTTEE
T ss_pred eecccceeeEEeccccc-ceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeeccc-CCceeeeeeCCCcccEE
Confidence 987654 4556677766 8999999999999999999999777532 1223334 56799999999665 55
Q ss_pred EE--EecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEe--CCCeEEEEeCCCCeeEEEecccCcCEEEEE
Q psy11350 296 GT--CCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG--LDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371 (471)
Q Consensus 296 ~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 371 (471)
++ |+.|++|++||+.+++++..+..| ..+.++.|+|++..+++++ .|+.|+|||+.+++++..+.+|.+.|++++
T Consensus 293 a~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~ 371 (420)
T 4gga_A 293 ATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLT 371 (420)
T ss_dssp EEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred EEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 54 457999999999999988888754 5688999999999888765 789999999999999999999999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCccchhee
Q psy11350 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 372 ~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
|+|+|.+|+||+.||+|+|||+....+....
T Consensus 372 ~spdg~~l~S~s~D~tvriWdv~~~~~~~~~ 402 (420)
T 4gga_A 372 MSPDGATVASAAADETLRLWRCFELDPARRR 402 (420)
T ss_dssp ECTTSSCEEEEETTTEEEEECCSCSSCC---
T ss_pred EcCCCCEEEEEecCCeEEEEECCCCCccchh
Confidence 9999999999999999999999877665543
No 69
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.8e-33 Score=264.84 Aligned_cols=236 Identities=19% Similarity=0.289 Sum_probs=211.0
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc--eEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE--LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 227 (471)
+|..+|.+++|+|++++|++++.||.|++||+.+++ ....+..|...|.+++|+|++. ++++++.||.|++||
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~l~~~~~dg~v~~~d 169 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK-----VCFSCCSDGNIAVWD 169 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSS-----EEEEEETTSCEEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCC-----EEEEEeCCCcEEEEe
Confidence 799999999999999999999999999999999877 6677888999999999999987 799999999999999
Q ss_pred CCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc---ccccCCCCcceEEEEECCCCCEEEEEecCCeE
Q psy11350 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL---ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304 (471)
Q Consensus 228 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~---~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 304 (471)
+.+++.+..+..+.. .+.+++|+|+++++++++.|+.+.++... ..........+.+++|+|++++|++++.++.|
T Consensus 170 ~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i 248 (337)
T 1gxr_A 170 LHNQTLVRQFQGHTD-GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNV 248 (337)
T ss_dssp TTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCceeeeeecccC-ceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcE
Confidence 999999988888776 89999999999999999999997775432 11111235579999999999999999999999
Q ss_pred EEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeC
Q psy11350 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384 (471)
Q Consensus 305 ~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 384 (471)
++||+.+++. ..+..|..+|.+++|+|++++|++++.||.|++||+.+++.+... .|...|.+++|+|++++|++++.
T Consensus 249 ~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~ 326 (337)
T 1gxr_A 249 EVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSG 326 (337)
T ss_dssp EEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEET
T ss_pred EEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecC
Confidence 9999998765 467789999999999999999999999999999999999887554 48899999999999999999999
Q ss_pred CCcEEEEEC
Q psy11350 385 DNAVKIWDL 393 (471)
Q Consensus 385 dg~i~iwd~ 393 (471)
||.|++|++
T Consensus 327 dg~i~iw~~ 335 (337)
T 1gxr_A 327 DKKATVYEV 335 (337)
T ss_dssp TSCEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999996
No 70
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=273.27 Aligned_cols=254 Identities=19% Similarity=0.263 Sum_probs=209.4
Q ss_pred ceeeeeecCCcCeEEEEEec-CCCEEEEEeCCCcEEEEeCCCCceEEEee-------------cCCCCEEEEEEeeCCCC
Q psy11350 143 SIYCSQVGDTRPISYCSFSP-DSQHVATASWSGLCKLWTVPECELVQTFR-------------GHDCNVGAIEFHPLPSE 208 (471)
Q Consensus 143 ~~~~~~~gh~~~V~~~~~s~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~-------------~h~~~v~~l~~~~~~~~ 208 (471)
.....+.+|.++|++++|+| ++++|++|+.||.|++||+.+++....+. +|...|.+++|+|++..
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 34456678999999999999 99999999999999999999876554443 59999999999994433
Q ss_pred CCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCC---CEEEEEeCCCeEEecc-----ccccccCCCC
Q psy11350 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG---RFLGTCCWDHSWRLDT-----PLANLEGHEP 280 (471)
Q Consensus 209 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~i~~~~~d~~~~~~~-----~~~~~~~~~~ 280 (471)
+|++++.||.|++||+.+++....+.... .+.++.++|.+ .++++++.++.+.++. ....+..| .
T Consensus 114 ----~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~ 186 (408)
T 4a11_B 114 ----MFTSSSFDKTLKVWDTNTLQTADVFNFEE--TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH-R 186 (408)
T ss_dssp ----CEEEEETTSEEEEEETTTTEEEEEEECSS--CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCC-C
T ss_pred ----EEEEEeCCCeEEEeeCCCCccceeccCCC--ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCC-C
Confidence 79999999999999999998888777433 78999999854 4999999999977643 23445555 5
Q ss_pred cceEEEEECCCCC-EEEEEecCCeEEEEECCCCc-EEEEe---------------eCCCCCeEEEEEeCCCCEEEEEeCC
Q psy11350 281 FRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQ-EVLHQ---------------EGHGKPVYCMSFQGDGSVVATGGLD 343 (471)
Q Consensus 281 ~~v~~l~~~~~~~-~l~~~~~dg~i~iwd~~~~~-~~~~~---------------~~~~~~v~~~~~s~d~~~l~t~~~d 343 (471)
..|.+++|+|++. .|++++.||.|++||++++. .+..+ .+|...|.+++|+|++.+|++++.|
T Consensus 187 ~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 266 (408)
T 4a11_B 187 QEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD 266 (408)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCC
Confidence 6899999999998 58999999999999998765 33333 5788999999999999999999999
Q ss_pred CeEEEEeCCCC-----------------------------------------------eeEEEecccCcCEEEEEEcCCC
Q psy11350 344 AFGRVWDLRTG-----------------------------------------------RCIMFLEGHLKSVFSVDFSPDG 376 (471)
Q Consensus 344 g~i~iwd~~~~-----------------------------------------------~~~~~~~~h~~~v~~~~~sp~~ 376 (471)
|.|++||+.++ +++..+.+|...|++++|+|++
T Consensus 267 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 346 (408)
T 4a11_B 267 NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNF 346 (408)
T ss_dssp SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTT
T ss_pred CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCC
Confidence 99999998754 4456677899999999999999
Q ss_pred CEEEEEeCCCcEEEEECCCccchheec
Q psy11350 377 YHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 377 ~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
++|++|+.||.|++||+.+++++....
T Consensus 347 ~~l~s~~~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 347 QELYSGSRDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp TEEEEEETTSCEEEEEECC--------
T ss_pred CEEEEECCCCeEEEEeCCCCCccCCCC
Confidence 999999999999999999998876543
No 71
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.2e-34 Score=274.85 Aligned_cols=246 Identities=18% Similarity=0.271 Sum_probs=207.2
Q ss_pred eecCCcCeEEEEEecC---CCEEEEEeCCCcEEEEeCCCCc-eEEEeecCCCCEEEEEE------eeCCCCCCccEEEEE
Q psy11350 148 QVGDTRPISYCSFSPD---SQHVATASWSGLCKLWTVPECE-LVQTFRGHDCNVGAIEF------HPLPSEGAVCSLASC 217 (471)
Q Consensus 148 ~~gh~~~V~~~~~s~~---~~~l~tg~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~------~~~~~~~~~~~l~s~ 217 (471)
..+|..+|.+++|+|+ +.+|++|+.||.|++||+.+++ .+..+.+|...|.++.| +|++. +|+++
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~-----~l~~~ 135 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAP-----EIVTG 135 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCC-----EEEEE
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCcc-----EEEEE
Confidence 3489999999999999 6999999999999999999888 88899999999999966 45666 79999
Q ss_pred eCCCcEEEEeCCCCc-ceeeecCCC---CcceEEEE----ECCCCCEEEEEeCCCeEEeccccc---cccCCCCcceEEE
Q psy11350 218 AQDGSVKLWSLDKDT-PLANLEGHE---PFRVSRIK----FHPSGRFLGTCCWDHSWRLDTPLA---NLEGHEPFRVSRI 286 (471)
Q Consensus 218 ~~dg~i~iwd~~~~~-~~~~~~~~~---~~~v~~~~----~s~~~~~i~~~~~d~~~~~~~~~~---~~~~~~~~~v~~l 286 (471)
+.||.|++||+.++. .+..+..+. ...+.++. |+|++.++++++.|+.+.++.... .........|.++
T Consensus 136 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~ 215 (357)
T 3i2n_A 136 SRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSL 215 (357)
T ss_dssp ETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEE
T ss_pred eCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEE
Confidence 999999999999887 667665443 34788888 789999999999999977754321 1122225689999
Q ss_pred EECC---CCCEEEEEecCCeEEEEECCCCcEEEEe-----eCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEeCCCC---
Q psy11350 287 KFHP---SGRFLGTCCWDHSWRLWDLNQGQEVLHQ-----EGHGKPVYCMSFQGDGS-VVATGGLDAFGRVWDLRTG--- 354 (471)
Q Consensus 287 ~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~s~d~~-~l~t~~~dg~i~iwd~~~~--- 354 (471)
+|+| ++.+|++++.||.|++||+++++.+..+ .+|...|++++|+|++. +|++|+.||.|++||++++
T Consensus 216 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 216 EFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp EESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred EcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 9999 9999999999999999999876654433 48999999999999998 8999999999999999754
Q ss_pred ----------------eeEEEecccCcCEEEEEEcCCCCEEE-EEeCCCcEEEEECCCccc
Q psy11350 355 ----------------RCIMFLEGHLKSVFSVDFSPDGYHLA-TGSEDNAVKIWDLRKRRL 398 (471)
Q Consensus 355 ----------------~~~~~~~~h~~~v~~~~~sp~~~~l~-s~s~dg~i~iwd~~~~~~ 398 (471)
+++..+.+|...|++++|+|++++|+ +++.||.|++||+.+.+.
T Consensus 296 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 296 SKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp --CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 46778889999999999999999998 899999999999987654
No 72
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.8e-33 Score=296.99 Aligned_cols=248 Identities=21% Similarity=0.296 Sum_probs=220.9
Q ss_pred eeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcE
Q psy11350 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 223 (471)
....+.+|..+|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++. +|++++.||.|
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~-----~l~~~~~dg~i 121 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP-----YVLSGSDDLTV 121 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS-----EEEEEETTSEE
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCC-----EEEEEcCCCEE
Confidence 4456778999999999999999999999999999999999999999999999999999999998 79999999999
Q ss_pred EEEeCCCC-cceeeecCCCCcceEEEEECC-CCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECC--CCCE
Q psy11350 224 KLWSLDKD-TPLANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHP--SGRF 294 (471)
Q Consensus 224 ~iwd~~~~-~~~~~~~~~~~~~v~~~~~s~-~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~--~~~~ 294 (471)
++||+.++ .....+..|.. .|.+++|+| ++..+++++.|+.+.++.. ...+..+....+.+++|+| ++.+
T Consensus 122 ~vw~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 200 (814)
T 3mkq_A 122 KLWNWENNWALEQTFEGHEH-FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY 200 (814)
T ss_dssp EEEEGGGTSEEEEEEECCSS-CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCE
T ss_pred EEEECCCCceEEEEEcCCCC-cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCE
Confidence 99999887 55566666665 899999999 8999999999999777542 3334445456899999999 9999
Q ss_pred EEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcC
Q psy11350 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374 (471)
Q Consensus 295 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp 374 (471)
|++++.||.|++||+.+++.+..+.+|...|.+++|+|++.+|++++.||.|++||+.+++.+..+..|...+.+++|+|
T Consensus 201 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 201 MITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280 (814)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECT
T ss_pred EEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC--EEEEEeCCCcEEEEECCCccc
Q psy11350 375 DGY--HLATGSEDNAVKIWDLRKRRL 398 (471)
Q Consensus 375 ~~~--~l~s~s~dg~i~iwd~~~~~~ 398 (471)
++. +++++ .++.+.+|++.....
T Consensus 281 ~~~~~~~~~~-~~~~~~~~~~~~~~~ 305 (814)
T 3mkq_A 281 TGRKNYIASG-FDNGFTVLSLGNDEP 305 (814)
T ss_dssp TCGGGEEEEE-ETTEEEEEECSCCSC
T ss_pred CCCceEEEEE-eCCCEEEEEcCCCCc
Confidence 987 45554 567788999876543
No 73
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-33 Score=272.91 Aligned_cols=244 Identities=19% Similarity=0.328 Sum_probs=207.4
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCC
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD 229 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 229 (471)
+|...|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|++ . +|++++.||.|++||+.
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~-----~l~~~~~dg~i~i~d~~ 204 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR--H-----VLSSGSRSGAIHHHDVR 204 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET--T-----EEEEEETTSEEEEEETT
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC--C-----EEEEEcCCCCEEEEecc
Confidence 4899999999999999999999999999999999999999999999999999954 3 79999999999999998
Q ss_pred -CCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCCC-EEEEEe--c
Q psy11350 230 -KDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGR-FLGTCC--W 300 (471)
Q Consensus 230 -~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~-~l~~~~--~ 300 (471)
.+..+..+..|.. .|.+++|+|++.++++++.|+.+.++.. ...+..| ...|.+++|+|++. ++++++ .
T Consensus 205 ~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~p~~~~ll~~~~gs~ 282 (401)
T 4aez_A 205 IANHQIGTLQGHSS-EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNH-NAAVKAVAWCPWQSNLLATGGGTM 282 (401)
T ss_dssp SSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCC-SSCCCEEEECTTSTTEEEEECCTT
T ss_pred cCcceeeEEcCCCC-CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCC-cceEEEEEECCCCCCEEEEecCCC
Confidence 4556677777776 8999999999999999999999777543 2234455 56899999999775 555554 7
Q ss_pred CCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEE--EeCCCeEEEEeCCCCeeEE--EecccCcCEEEEEEcCCC
Q psy11350 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVAT--GGLDAFGRVWDLRTGRCIM--FLEGHLKSVFSVDFSPDG 376 (471)
Q Consensus 301 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t--~~~dg~i~iwd~~~~~~~~--~~~~h~~~v~~~~~sp~~ 376 (471)
|+.|++||+.+++.+..+. +...|.+++|+|++.++++ |+.||.|++||+.++.... .+.+|...|.+++|+|++
T Consensus 283 d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg 361 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDG 361 (401)
T ss_dssp TCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTS
T ss_pred CCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCC
Confidence 9999999999999888876 6678999999999999999 4489999999999875544 467899999999999999
Q ss_pred CEEEEEeCCCcEEEEECCCccchheec
Q psy11350 377 YHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 377 ~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
.+|++++.||.|++||+.+++.+....
T Consensus 362 ~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 362 RILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp SEEEEECTTSEEEEEECCC--------
T ss_pred CEEEEEeCCCcEEEEECCCCccccccc
Confidence 999999999999999999998876543
No 74
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7.8e-34 Score=272.78 Aligned_cols=249 Identities=16% Similarity=0.227 Sum_probs=211.9
Q ss_pred eeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEE--eecCCCCEEEEEEeeCCCCCCccEEEEEeCCC
Q psy11350 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT--FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg 221 (471)
....+.+|...|.+++|+|++++|++++.||.|++||+.+++.... +..|...|.+++|+|++. +|++++.||
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~d~ 118 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEK-----KFAVGSGSR 118 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSS-----EEEEEETTS
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCC-----EEEEEeCCC
Confidence 4556779999999999999999999999999999999988875544 367899999999999987 799999999
Q ss_pred cEEEEeCCCCcc---eeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----------------------cccc
Q psy11350 222 SVKLWSLDKDTP---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----------------------LANL 275 (471)
Q Consensus 222 ~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----------------------~~~~ 275 (471)
.|++||+..+.. ...+.......|.+++|+|+++++++++.|+.+.++.. ...+
T Consensus 119 ~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (372)
T 1k8k_C 119 VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES 198 (372)
T ss_dssp SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC
T ss_pred EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEec
Confidence 999999988763 33443333448999999999999999999998766542 2233
Q ss_pred cCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCC--
Q psy11350 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT-- 353 (471)
Q Consensus 276 ~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~-- 353 (471)
..| ...|.+++|+|++++|++++.||.|++||+++++.+..+..|..+|.+++|+|++.+|++| .|+.|++|++.+
T Consensus 199 ~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~ 276 (372)
T 1k8k_C 199 SSS-CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAA 276 (372)
T ss_dssp CCC-SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTT
T ss_pred CCC-CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcC
Confidence 344 5689999999999999999999999999999999999999999999999999999988887 899999999987
Q ss_pred Cee--------------------------------E------EEe-cccCcCEEEEEEc-CCC---CEEEEEeCCCcEEE
Q psy11350 354 GRC--------------------------------I------MFL-EGHLKSVFSVDFS-PDG---YHLATGSEDNAVKI 390 (471)
Q Consensus 354 ~~~--------------------------------~------~~~-~~h~~~v~~~~~s-p~~---~~l~s~s~dg~i~i 390 (471)
++. . ..+ .+|...|++++|+ ++| .+|++|+.||.|++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~ 356 (372)
T 1k8k_C 277 GKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSI 356 (372)
T ss_dssp TEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEE
T ss_pred ceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEE
Confidence 421 0 223 4899999999977 566 99999999999999
Q ss_pred EECCCccch
Q psy11350 391 WDLRKRRLL 399 (471)
Q Consensus 391 wd~~~~~~~ 399 (471)
||+++++.+
T Consensus 357 W~~~~~~~~ 365 (372)
T 1k8k_C 357 WDVRSLESA 365 (372)
T ss_dssp EEHHHHHHH
T ss_pred EEecChhHh
Confidence 999876543
No 75
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.2e-33 Score=292.50 Aligned_cols=242 Identities=23% Similarity=0.420 Sum_probs=206.7
Q ss_pred eeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEE
Q psy11350 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 145 ~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 224 (471)
...+.+|...|.+++|+|++++|++|+.||+|+|||+.+++.+..+.+|...|.+++|+|++. +|++|+.|++|+
T Consensus 423 ~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~-----~l~s~s~D~~i~ 497 (694)
T 3dm0_A 423 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR-----QIVSASRDRTIK 497 (694)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSS-----CEEEEETTSCEE
T ss_pred cceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCC-----EEEEEeCCCEEE
Confidence 346789999999999999999999999999999999999999999999999999999999998 699999999999
Q ss_pred EEeCCCCcceeee---cCCCCcceEEEEECCCC--CEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCCCE
Q psy11350 225 LWSLDKDTPLANL---EGHEPFRVSRIKFHPSG--RFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRF 294 (471)
Q Consensus 225 iwd~~~~~~~~~~---~~~~~~~v~~~~~s~~~--~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~ 294 (471)
+||+......... ..|.. .|.+++|+|++ ..+++++.|+.+++|.. ...+.+| ...|++++|+|++++
T Consensus 498 iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h-~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 498 LWNTLGECKYTISEGGEGHRD-WVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGH-TGYVSTVAVSPDGSL 575 (694)
T ss_dssp EECTTSCEEEEECSSTTSCSS-CEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSE
T ss_pred EEECCCCcceeeccCCCCCCC-cEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCC-CCCEEEEEEeCCCCE
Confidence 9998654333222 23433 79999999987 58999999999877643 3345666 568999999999999
Q ss_pred EEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccC----------
Q psy11350 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL---------- 364 (471)
Q Consensus 295 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~---------- 364 (471)
|++++.||+|++||+++++.+..+.. ...|.+++|+|++.+|++++ ++.|+|||++++..+..+..+.
T Consensus 576 l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 653 (694)
T 3dm0_A 576 CASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNS 653 (694)
T ss_dssp EEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC---------
T ss_pred EEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhcccccccccccccc
Confidence 99999999999999999998877764 56799999999998887765 6679999999998887765332
Q ss_pred ---------cCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 365 ---------KSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 365 ---------~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
..+++++|+|+|++|++|+.||+|+|||+..
T Consensus 654 ~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 654 GPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp -------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred ccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 1378999999999999999999999999863
No 76
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-33 Score=267.39 Aligned_cols=252 Identities=19% Similarity=0.232 Sum_probs=220.6
Q ss_pred ceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCC--
Q psy11350 143 SIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD-- 220 (471)
Q Consensus 143 ~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d-- 220 (471)
.....+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+. |...|.+++|+|++. ++++++.+
T Consensus 65 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-----~l~~~~~~~~ 138 (369)
T 3zwl_B 65 ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGN-----YFLAILDNVM 138 (369)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSS-----EEEEEECCBT
T ss_pred hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCC-----EEEEecCCcc
Confidence 3455677899999999999999999999999999999999999998887 889999999999998 79999998
Q ss_pred ---CcEEEEeCCCCcce-----------eeecCCC-CcceEEEEECCCCCEEEEEeCCCeEEeccc------cccccCCC
Q psy11350 221 ---GSVKLWSLDKDTPL-----------ANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLDTP------LANLEGHE 279 (471)
Q Consensus 221 ---g~i~iwd~~~~~~~-----------~~~~~~~-~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~------~~~~~~~~ 279 (471)
|.|.+||+..+... ..+..+. ...+.+++|+|+++++++++.++.+.++.. ...+..|
T Consensus 139 ~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~- 217 (369)
T 3zwl_B 139 KNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLH- 217 (369)
T ss_dssp TBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECC-
T ss_pred CCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecC-
Confidence 99999998766432 2222222 127999999999999999999998766543 2234455
Q ss_pred CcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCC--------------e
Q psy11350 280 PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDA--------------F 345 (471)
Q Consensus 280 ~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg--------------~ 345 (471)
...|.+++|+|++++|++++.||.|++||+++++.+..+. +..++.+++|+|++.++++++.++ .
T Consensus 218 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 296 (369)
T 3zwl_B 218 EKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFE 296 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CE
T ss_pred CCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcce
Confidence 5689999999999999999999999999999999888877 788999999999999999999988 8
Q ss_pred EEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchhee
Q psy11350 346 GRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 346 i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
+++||+.+++++..+.+|...|++++|+|++++|++++.||.|++|+++++.....+
T Consensus 297 i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 297 ARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKY 353 (369)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCC
T ss_pred eEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccchhHH
Confidence 999999999999999999999999999999999999999999999999987765543
No 77
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=289.67 Aligned_cols=243 Identities=10% Similarity=0.029 Sum_probs=200.2
Q ss_pred eeeecCCcCeEEEEEecC------CCEEEEEeCCCcEEEEeCCCCce-----------EEEeecCCCCEEEEEEeeCCCC
Q psy11350 146 CSQVGDTRPISYCSFSPD------SQHVATASWSGLCKLWTVPECEL-----------VQTFRGHDCNVGAIEFHPLPSE 208 (471)
Q Consensus 146 ~~~~gh~~~V~~~~~s~~------~~~l~tg~~dg~i~iwd~~~~~~-----------~~~~~~h~~~v~~l~~~~~~~~ 208 (471)
..+.+|.+.|.+++|+|+ +.+||+|+.||+|+|||+.++.. ...+.+|...|++++|+|.+
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-- 278 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-- 278 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS--
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC--
Confidence 346678999999999997 57999999999999999986642 24678899999999999853
Q ss_pred CCccEEEEEeCCCcEEEEeCCCCc-ceeeecCCCCcceEEE--EECCCC-CEEEEEeCCCeEEeccccc-----cccCCC
Q psy11350 209 GAVCSLASCAQDGSVKLWSLDKDT-PLANLEGHEPFRVSRI--KFHPSG-RFLGTCCWDHSWRLDTPLA-----NLEGHE 279 (471)
Q Consensus 209 ~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~--~~s~~~-~~i~~~~~d~~~~~~~~~~-----~~~~~~ 279 (471)
.|++|+.||+|++||+.++. +...+..|.. .|.++ .|+|++ .+|++++.|+++++|.... .+.+|.
T Consensus 279 ----~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~-~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~ 353 (524)
T 2j04_B 279 ----TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDS-YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF 353 (524)
T ss_dssp ----EEEEEETTSEEEEEETTBCSSCSEEEECSSS-CEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC
T ss_pred ----eEEEEeCCCEEEEEECCCCCCceEEeecccc-cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc
Confidence 69999999999999998764 4456777776 89999 578888 8999999999988875422 334443
Q ss_pred C-cceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCC-----
Q psy11350 280 P-FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT----- 353 (471)
Q Consensus 280 ~-~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~----- 353 (471)
. ..|.+++|+|+++.|++++.|++|++||++++.++..+.+|...|++++|+|+|.+|++|+.||+|++||+..
T Consensus 354 ~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~ 433 (524)
T 2j04_B 354 RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHG 433 (524)
T ss_dssp SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTC
T ss_pred ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccc
Confidence 3 2478999999999999999999999999999998888899999999999999999999999999999997531
Q ss_pred ---------------------------------------CeeEEEecccCcCEEEEEEcCCC---CEEEEEeCCCcEEEE
Q psy11350 354 ---------------------------------------GRCIMFLEGHLKSVFSVDFSPDG---YHLATGSEDNAVKIW 391 (471)
Q Consensus 354 ---------------------------------------~~~~~~~~~h~~~v~~~~~sp~~---~~l~s~s~dg~i~iw 391 (471)
+.++..+.+|...|.+++|+|++ ..+++|+.||+|+||
T Consensus 434 ~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw 513 (524)
T 2j04_B 434 IKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLE 513 (524)
T ss_dssp C------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEE
T ss_pred cccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEE
Confidence 11223445688889999999985 499999999999999
Q ss_pred ECCC
Q psy11350 392 DLRK 395 (471)
Q Consensus 392 d~~~ 395 (471)
+++-
T Consensus 514 ~l~~ 517 (524)
T 2j04_B 514 YLSL 517 (524)
T ss_dssp ECSC
T ss_pred Eccc
Confidence 9864
No 78
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-33 Score=295.36 Aligned_cols=235 Identities=14% Similarity=0.068 Sum_probs=195.5
Q ss_pred eeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEE
Q psy11350 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 226 (471)
...||...|++++|+|++++||+|+.||.|+||+..+.+....+ .|..+|.+++|+| +. +|++++.|++|++|
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~-----~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GI-----YLVVINAKDTVYVL 84 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TT-----EEEEEETTCEEEEE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CC-----EEEEEECcCeEEEE
Confidence 34699999999999999999999999999999999887766554 4788999999999 65 79999999999999
Q ss_pred eCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc----------------ccccCCCCcceEEEEECC
Q psy11350 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL----------------ANLEGHEPFRVSRIKFHP 290 (471)
Q Consensus 227 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~----------------~~~~~~~~~~v~~l~~~~ 290 (471)
|+.+++++..+..+ ..|++++|+|+++++++|+.|+.+++|... ..+.+| ...|.+++|+|
T Consensus 85 d~~~~~~~~~~~~~--~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h-~~~V~sl~~sp 161 (902)
T 2oaj_A 85 SLYSQKVLTTVFVP--GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAAR-LSPIVSIQWNP 161 (902)
T ss_dssp ETTTCSEEEEEECS--SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSC-CCCCCEEEEET
T ss_pred ECCCCcEEEEEcCC--CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccC-CCCeEEEEEcc
Confidence 99999988888633 389999999999999999999997776432 122344 56899999999
Q ss_pred C-CCEEEEEecCCeEEEEECCCCcEEEEeeCC------------------CCCeEEEEEeCCCCEEEEEeCCCeEEEEeC
Q psy11350 291 S-GRFLGTCCWDHSWRLWDLNQGQEVLHQEGH------------------GKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351 (471)
Q Consensus 291 ~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------------------~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~ 351 (471)
+ +..|++|+.||.| +||+++++.+..+..| ...|++++|+|+|.+|++|+.||.|++||+
T Consensus 162 ~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 162 RDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA 240 (902)
T ss_dssp TEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 6 5789999999999 9999999988887765 577999999999999999999999999999
Q ss_pred CCCeeEEE--e---cc-------------cCcCEEEEEEc----CCC-CEEEEEeCC-----CcEEEEE
Q psy11350 352 RTGRCIMF--L---EG-------------HLKSVFSVDFS----PDG-YHLATGSED-----NAVKIWD 392 (471)
Q Consensus 352 ~~~~~~~~--~---~~-------------h~~~v~~~~~s----p~~-~~l~s~s~d-----g~i~iwd 392 (471)
++++++.. + .. |...|++++|+ |++ .+|++|+.| +.+.+|+
T Consensus 241 ~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~ 309 (902)
T 2oaj_A 241 NSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMID 309 (902)
T ss_dssp TTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEE
T ss_pred CCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEe
Confidence 99987753 2 12 34579999995 443 456666554 2566665
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-33 Score=259.74 Aligned_cols=247 Identities=21% Similarity=0.285 Sum_probs=216.8
Q ss_pred ceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC---ceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeC
Q psy11350 143 SIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC---ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ 219 (471)
Q Consensus 143 ~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~ 219 (471)
.....+.+|...|.+++|+|++++|++|+.||.|++|++.+. +.+..+.+|...|.++.|. +. ++++++.
T Consensus 50 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-----~l~~~~~ 122 (313)
T 3odt_A 50 WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DG-----VVISGSW 122 (313)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TT-----EEEEEET
T ss_pred EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--CC-----EEEEEeC
Confidence 344566789999999999999999999999999999998654 5677888999999999993 33 7999999
Q ss_pred CCcEEEEeCCCCcceeeecCCCCcceEEEEECC-CCCEEEEEeCCCeEEecc---ccccccCCCCcceEEEEECCCCCEE
Q psy11350 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLDT---PLANLEGHEPFRVSRIKFHPSGRFL 295 (471)
Q Consensus 220 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~i~~~~~d~~~~~~~---~~~~~~~~~~~~v~~l~~~~~~~~l 295 (471)
||.|++|| .+.....+..+.. .+.++.|+| ++.++++++.|+.+.++. ....+.......+.+++|+|++. +
T Consensus 123 d~~i~~~d--~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~ 198 (313)
T 3odt_A 123 DKTAKVWK--EGSLVYNLQAHNA-SVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-F 198 (313)
T ss_dssp TSEEEEEE--TTEEEEEEECCSS-CEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-E
T ss_pred CCCEEEEc--CCcEEEecccCCC-ceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-E
Confidence 99999999 6777777777766 899999988 999999999999977654 34445554467899999999988 9
Q ss_pred EEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCC
Q psy11350 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD 375 (471)
Q Consensus 296 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 375 (471)
++++.||.|++||+++++.+..+.+|..+|++++|+|++ .|++++.||.|++||+++++++..+..|...|.+++|+|+
T Consensus 199 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 277 (313)
T 3odt_A 199 ISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSN 277 (313)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTT
T ss_pred EEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccC
Confidence 999999999999999999999999999999999999999 5889999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCccchhee
Q psy11350 376 GYHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 376 ~~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
++ +++++.||.|++||+++++.+...
T Consensus 278 ~~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 278 GD-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp SC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred CC-EEEEeCCCcEEEEeCCCCceeehh
Confidence 98 667899999999999998876544
No 80
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-32 Score=282.40 Aligned_cols=251 Identities=21% Similarity=0.248 Sum_probs=221.8
Q ss_pred ceeeeeecCCcC-eEEEEEec--CCCEEEEEeCCCcEEEEeCCCC--------ceEEEeecCCCCEEEEEEeeCCCCCCc
Q psy11350 143 SIYCSQVGDTRP-ISYCSFSP--DSQHVATASWSGLCKLWTVPEC--------ELVQTFRGHDCNVGAIEFHPLPSEGAV 211 (471)
Q Consensus 143 ~~~~~~~gh~~~-V~~~~~s~--~~~~l~tg~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~l~~~~~~~~~~~ 211 (471)
.....+.+|... |++++|+| ++++|++|+.||.|++||+.++ +....+..|..+|.+++|+|++.
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---- 129 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGR---- 129 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSS----
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCC----
Confidence 455677899999 99999999 9999999999999999999754 67778889999999999999998
Q ss_pred cEEEEEeCC----CcEEEEeCCCCcceeeecCCCCcceEEEEECCCCC-EEEEEeCCCeEEeccc-----cccccCCCCc
Q psy11350 212 CSLASCAQD----GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLDTP-----LANLEGHEPF 281 (471)
Q Consensus 212 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~i~~~~~d~~~~~~~~-----~~~~~~~~~~ 281 (471)
+|++++.+ +.|.+|| .++.+..+..|.. .|.+++|+|++. .+++++.|+.+.++.. ...+..| ..
T Consensus 130 -~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-~~ 204 (615)
T 1pgu_A 130 -RLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQ-RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-HK 204 (615)
T ss_dssp -EEEEEECCSSCSEEEEETT--TCCEEEECCSCSS-CEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSS-SC
T ss_pred -EEEEeccCCCCccEEEEEE--CCCcceeeecCCc-cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeeccc-CC
Confidence 78998887 6888888 6777888887776 899999999998 8999999999777643 3344555 44
Q ss_pred ---ceEEEEECCC-CCEEEEEecCCeEEEEECCCCcEEEEe-e---CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCC
Q psy11350 282 ---RVSRIKFHPS-GRFLGTCCWDHSWRLWDLNQGQEVLHQ-E---GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT 353 (471)
Q Consensus 282 ---~v~~l~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~-~---~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~ 353 (471)
.|.+++|+|+ +++|++++.||.|++||+.+++.+..+ . .|..+|.+++|+ ++.+|++++.|+.|++||+++
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 205 QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT
T ss_pred CCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC
Confidence 7999999999 999999999999999999999999888 6 899999999999 999999999999999999999
Q ss_pred CeeEEEeccc----CcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecc
Q psy11350 354 GRCIMFLEGH----LKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQ 404 (471)
Q Consensus 354 ~~~~~~~~~h----~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 404 (471)
++.+..+..+ ...+.++.|+ ++.++++++.||.|++||+.+++++..+..
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~ 337 (615)
T 1pgu_A 284 SKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISG 337 (615)
T ss_dssp TEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECC
T ss_pred CcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeC
Confidence 9999888876 4678899886 889999999999999999998887766643
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.1e-33 Score=271.21 Aligned_cols=242 Identities=18% Similarity=0.296 Sum_probs=207.5
Q ss_pred ecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeec-CCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe
Q psy11350 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRG-HDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 227 (471)
.+|...+.+.++++++..+++++.||.|++||+.+++....+.. |...|.+++|+|++. +|++|+.||.|++||
T Consensus 88 ~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~-----~l~~~~~dg~i~iwd 162 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGS-----FLSVGLGNGLVDIYD 162 (401)
T ss_dssp TTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSS-----EEEEEETTSCEEEEE
T ss_pred CCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCC-----EEEEECCCCeEEEEE
Confidence 46766544433343446688888899999999999998887775 889999999999988 799999999999999
Q ss_pred CCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc------cccccCCCCcceEEEEECCCCCEEEEEecC
Q psy11350 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP------LANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301 (471)
Q Consensus 228 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~------~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 301 (471)
+.+++.+..+..|.. .|.++.| ++.++++++.|+.+.++.. ...+..| ...|.+++|+|++++|++++.|
T Consensus 163 ~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d 238 (401)
T 4aez_A 163 VESQTKLRTMAGHQA-RVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGH-SSEVCGLAWRSDGLQLASGGND 238 (401)
T ss_dssp TTTCCEEEEECCCSS-CEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECC-SSCEEEEEECTTSSEEEEEETT
T ss_pred CcCCeEEEEecCCCC-ceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCC-CCCeeEEEEcCCCCEEEEEeCC
Confidence 999999999988776 8999999 5689999999999777543 2344555 5689999999999999999999
Q ss_pred CeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCC-CEEEEEe--CCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCE
Q psy11350 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG-SVVATGG--LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378 (471)
Q Consensus 302 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~t~~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 378 (471)
|.|++||+++++.+..+..|...|.+++|+|++ .++++|+ .|+.|++||+.+++++..+. |...|.+++|+|++++
T Consensus 239 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~ 317 (401)
T 4aez_A 239 NVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKE 317 (401)
T ss_dssp SCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSE
T ss_pred CeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCe
Confidence 999999999999999999999999999999966 5666655 79999999999999998886 6688999999999999
Q ss_pred EEEEe--CCCcEEEEECCCccchh
Q psy11350 379 LATGS--EDNAVKIWDLRKRRLLK 400 (471)
Q Consensus 379 l~s~s--~dg~i~iwd~~~~~~~~ 400 (471)
|++++ .||.|++||+.+++...
T Consensus 318 l~~~~g~~dg~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 318 IMSTHGFPDNNLSIWSYSSSGLTK 341 (401)
T ss_dssp EEEEECTTTCEEEEEEEETTEEEE
T ss_pred EEEEeecCCCcEEEEecCCcccee
Confidence 99954 89999999998865544
No 82
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=264.14 Aligned_cols=253 Identities=17% Similarity=0.241 Sum_probs=207.1
Q ss_pred cccceeeeeecCCcCeEEEEEecC---CCEEEEEeCCCcEEEEeCCC-CceE-EEeecCCCCEEEEEEeeCCCCCCccEE
Q psy11350 140 TSLSIYCSQVGDTRPISYCSFSPD---SQHVATASWSGLCKLWTVPE-CELV-QTFRGHDCNVGAIEFHPLPSEGAVCSL 214 (471)
Q Consensus 140 ~~~~~~~~~~gh~~~V~~~~~s~~---~~~l~tg~~dg~i~iwd~~~-~~~~-~~~~~h~~~v~~l~~~~~~~~~~~~~l 214 (471)
.++.....+.+|...|++++|+|+ |++|++|+.||.|++||+.+ +..+ ..+.+|...|.+++|+|++. +|
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-----~l 101 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGS-----KV 101 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSS-----EE
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCC-----EE
Confidence 344556677899999999999999 69999999999999999987 5555 78889999999999999988 79
Q ss_pred EEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEE--CCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEE
Q psy11350 215 ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKF--HPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIK 287 (471)
Q Consensus 215 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~ 287 (471)
++++.||.|++||+.+++.+... .|.. .|.++.| +|++.++++++.|+.+.++.. ...+..+ ..+.++.
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~~~~-~~~~-~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~~~ 177 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAIQIA-QHDA-PVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP--ERCYCAD 177 (368)
T ss_dssp EEEETTSEEEEEETTTTEEEEEE-ECSS-CEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS--SCEEEEE
T ss_pred EEEcCCCcEEEEEcCCCCceeec-cccC-ceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC--CCceEEE
Confidence 99999999999999988876643 3444 8999999 999999999999999777543 2233333 2466666
Q ss_pred ECCCCCEEEEEecCCeEEEEECCCCcEEEEe--eCCCCCeEEEEEeCCCCE----EEEEeCCCeEEEEeCCCC---eeEE
Q psy11350 288 FHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ--EGHGKPVYCMSFQGDGSV----VATGGLDAFGRVWDLRTG---RCIM 358 (471)
Q Consensus 288 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~s~d~~~----l~t~~~dg~i~iwd~~~~---~~~~ 358 (471)
+. ...+++++.++.+++|+++........ ..+...+.++++.+++.. +++++.||.|++||++.. ..+.
T Consensus 178 ~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~ 255 (368)
T 3mmy_A 178 VI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNF 255 (368)
T ss_dssp EE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSE
T ss_pred ec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccce
Confidence 65 458889999999999999876544332 234556677777665544 999999999999999987 5677
Q ss_pred EecccCc------------CEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 359 FLEGHLK------------SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 359 ~~~~h~~------------~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
.+.+|.. .|++++|+|++++|++|+.||.|++||+.+++++..+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 312 (368)
T 3mmy_A 256 TFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE 312 (368)
T ss_dssp EEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred eeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec
Confidence 7777776 79999999999999999999999999999988776554
No 83
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.1e-32 Score=257.43 Aligned_cols=265 Identities=22% Similarity=0.366 Sum_probs=217.9
Q ss_pred cchhhhhhHHHHhhccc-cceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEe
Q psy11350 125 EATRTARNQELQKHLTS-LSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203 (471)
Q Consensus 125 ~~~~~~~~~~~~~~~~~-~~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~ 203 (471)
..++.++.|++...... ......+.+|..+|.+++|+|++++|++|+.||.|++|+............+...+..+.++
T Consensus 58 s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (340)
T 4aow_A 58 SRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 137 (340)
T ss_dssp ETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred cCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEe
Confidence 34555666655432222 22345678999999999999999999999999999999999999888888999999999999
Q ss_pred eCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCC--CEEEEEeCCCeEEecc-----cccccc
Q psy11350 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG--RFLGTCCWDHSWRLDT-----PLANLE 276 (471)
Q Consensus 204 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~i~~~~~d~~~~~~~-----~~~~~~ 276 (471)
+.+. +|++++.|+.+++||+................+..++|++++ .++++++.|+.+.++. ....+.
T Consensus 138 ~~~~-----~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~ 212 (340)
T 4aow_A 138 SDNR-----QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 212 (340)
T ss_dssp TTSS-----CEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ecCc-----cceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec
Confidence 9988 699999999999999876655444333333489999998875 4788999999877753 234455
Q ss_pred CCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCee
Q psy11350 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356 (471)
Q Consensus 277 ~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~ 356 (471)
+| ...|++++|+|++++|++++.||+|++||+++.+.+..+.. ...|.+++|+|++.++ +++.|+.|++||++++..
T Consensus 213 ~h-~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~ 289 (340)
T 4aow_A 213 GH-TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWL-CAATGPSIKIWDLEGKII 289 (340)
T ss_dssp CC-SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEE
T ss_pred CC-CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-CceEEeeecCCCCcee-eccCCCEEEEEECCCCeE
Confidence 66 56899999999999999999999999999999998888775 4689999999987654 566799999999998877
Q ss_pred EEEec---------ccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc
Q psy11350 357 IMFLE---------GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 357 ~~~~~---------~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~ 397 (471)
+..+. +|...|++++|+|+|++|++|+.||.|+|||+.+|.
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 290 VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 66553 688899999999999999999999999999999875
No 84
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.6e-33 Score=273.02 Aligned_cols=238 Identities=15% Similarity=0.179 Sum_probs=204.3
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT 232 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 232 (471)
..+....|+|++++|++|+.||.|++||+.+++....+.+|...|.+++|+|++. +|++++.||.|++||+.+++
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-----~l~s~s~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGE-----ALISSSQDMQLKIWSVKDGS 172 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSS-----EEEEEETTSEEEEEETTTCC
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCC-----EEEEEeCCCeEEEEeCCCCc
Confidence 4455567899999999999999999999999999988899999999999999988 79999999999999999999
Q ss_pred ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCC--CC---------------------cceE
Q psy11350 233 PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGH--EP---------------------FRVS 284 (471)
Q Consensus 233 ~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~--~~---------------------~~v~ 284 (471)
.+..+..|.. .|.+++|+|+++++++++.|+.+.+|.. ...+..+ .. ..+.
T Consensus 173 ~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~ 251 (420)
T 3vl1_A 173 NPRTLIGHRA-TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN 251 (420)
T ss_dssp CCEEEECCSS-CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred CceEEcCCCC-cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence 9999988876 8999999999999999999998776542 2222221 11 3455
Q ss_pred EEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee-CCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEeCCCCe-eEEEec
Q psy11350 285 RIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GHGKPVYCMSFQGDGS-VVATGGLDAFGRVWDLRTGR-CIMFLE 361 (471)
Q Consensus 285 ~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~d~~-~l~t~~~dg~i~iwd~~~~~-~~~~~~ 361 (471)
+++|+|++++|++++.||.|++||+++++.+..+. .|...|++++|+|++. +|++|+.||.|++||+++++ ++..+.
T Consensus 252 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~ 331 (420)
T 3vl1_A 252 NLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFL 331 (420)
T ss_dssp TTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred ceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhh
Confidence 56668999999999999999999999998777764 5889999999999998 99999999999999999875 466776
Q ss_pred c-cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc
Q psy11350 362 G-HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 362 ~-h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~ 397 (471)
+ |...|.++.| |++.+|++++.||.|++||+....
T Consensus 332 ~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 332 INEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp ESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTT
T ss_pred ccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCC
Confidence 6 6677888855 577899999999999999998753
No 85
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-34 Score=278.57 Aligned_cols=282 Identities=11% Similarity=0.038 Sum_probs=214.7
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc-----------------------------eEEEee-cCCCCEEE
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE-----------------------------LVQTFR-GHDCNVGA 199 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~-----------------------------~~~~~~-~h~~~v~~ 199 (471)
.-...|.+++|||||+++|+++.|++|+ |...++ ....+. .|...|.+
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~ 90 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRV 90 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEE
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEE
Confidence 3457899999999999999999999995 332222 111222 45788999
Q ss_pred EEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCC----cceEEEEECCCCCEEEEEeCCCeEEeccccc--
Q psy11350 200 IEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP----FRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA-- 273 (471)
Q Consensus 200 l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~-- 273 (471)
++|+|++. .|++++.||.|++||... ++..+. +.. ..+.+++|||||++|++|+.||.+++|....
T Consensus 91 vawSPdG~-----~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 91 CKPSPIDD-----WMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp EEECSSSS-----CEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCT
T ss_pred EEECCCCC-----EEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCc
Confidence 99999998 699999999999999544 555555 443 2599999999999999999999987765332
Q ss_pred ----------cc----cCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcE---EEEe-eCCCCCeEEEEEeCCCC
Q psy11350 274 ----------NL----EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE---VLHQ-EGHGKPVYCMSFQGDGS 335 (471)
Q Consensus 274 ----------~~----~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~-~~~~~~v~~~~~s~d~~ 335 (471)
.+ .+| ...|.+++|+|+| +++++.|++|++||+..++. ...+ .+|...|.+++|+ |+
T Consensus 163 l~~~~~i~l~ti~~~~~gh-~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~ 237 (588)
T 2j04_A 163 ENTPEFYFESSIRLSDAGS-KDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DY 237 (588)
T ss_dssp TTCCCCEEEEEEECSCTTC-CCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TT
T ss_pred cccccceeeeeeecccccc-cccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CC
Confidence 22 444 4689999999999 88899999999999988763 3456 4788999999999 68
Q ss_pred EEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEE--cCCCCEEEEEeCCCcEEEEECCCccchheecccCCCcccee
Q psy11350 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF--SPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVT 413 (471)
Q Consensus 336 ~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 413 (471)
.|++++ ++.|++||+.+++......+|...|..++| +|++..|++++.||+ ++|.++. +. ..+....+.
T Consensus 238 ~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~------~~-~spd~~l~a 308 (588)
T 2j04_A 238 KVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE------LH-VTADNIIAP 308 (588)
T ss_dssp EEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS------EE-EECCCSSHH
T ss_pred EEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc------EE-ECCCceEEE
Confidence 888887 699999999988874444489999999999 999999999999999 9999882 22 222222222
Q ss_pred eccccceeeeecccCCCcccccchhhhcccccceeeecccceeeeecCCeEEEeec
Q psy11350 414 SLLTDLYIDVLESLNPGIGNIISSALKEQVEPIPLLLDIQKLTFKFDSDLHAMVLN 469 (471)
Q Consensus 414 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fs~dg~~lA~~~~ 469 (471)
. .+..+.+|...... +..+.....+..++|||||+.+|+.++
T Consensus 309 ~--~d~~v~lW~~~g~~------------l~~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 309 Y--LEKKFKKWSTIWNE------------FNNYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp H--HHHHHHHTTTTTTS------------SSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred E--cCCEEEEEECCCCc------------eeeeccceEEEEEEECCCCCEEEEEEe
Confidence 2 25556655432221 112233445788999999999999875
No 86
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.1e-32 Score=267.05 Aligned_cols=232 Identities=22% Similarity=0.467 Sum_probs=208.2
Q ss_pred eeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEE
Q psy11350 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 226 (471)
...+|...|.|++| ++++|++|+.||.|++||+.+++....+.+|...|.+++| ++. +|++|+.||+|++|
T Consensus 128 ~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~-----~l~sg~~dg~i~vw 198 (435)
T 1p22_A 128 CRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DER-----VIITGSSDSTVRVW 198 (435)
T ss_dssp CCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSS-----EEEEEETTSCEEEE
T ss_pred cccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCC-----EEEEEcCCCeEEEE
Confidence 34467788998877 7899999999999999999999999999999999999999 444 79999999999999
Q ss_pred eCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc--------ccccCCCCcceEEEEECCCCCEEEEE
Q psy11350 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL--------ANLEGHEPFRVSRIKFHPSGRFLGTC 298 (471)
Q Consensus 227 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~--------~~~~~~~~~~v~~l~~~~~~~~l~~~ 298 (471)
|+.+++.+..+..|.. .|.++.|+ +.++++++.|+.+.++... ..+.+| ...|.+++| ++++|+++
T Consensus 199 d~~~~~~~~~~~~h~~-~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~s~ 272 (435)
T 1p22_A 199 DVNTGEMLNTLIHHCE-AVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH-RAAVNVVDF--DDKYIVSA 272 (435)
T ss_dssp ESSSCCEEEEECCCCS-CEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCC-SSCEEEEEE--ETTEEEEE
T ss_pred ECCCCcEEEEEcCCCC-cEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCC-CCcEEEEEe--CCCEEEEE
Confidence 9999999999988876 89999997 4599999999997775432 334455 568999999 78899999
Q ss_pred ecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCE
Q psy11350 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378 (471)
Q Consensus 299 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 378 (471)
+.||.|++||+++++.+..+.+|...|.++.|+ +.++++|+.||.|++||+++++++..+.+|...|.+++| ++.+
T Consensus 273 ~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~ 348 (435)
T 1p22_A 273 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKR 348 (435)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSE
T ss_pred eCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCE
Confidence 999999999999999999999999999999994 679999999999999999999999999999999999999 7889
Q ss_pred EEEEeCCCcEEEEECCCcc
Q psy11350 379 LATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 379 l~s~s~dg~i~iwd~~~~~ 397 (471)
|++|+.||.|++||+.+++
T Consensus 349 l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 349 IVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EEEEETTSCEEEEEHHHHT
T ss_pred EEEEeCCCcEEEEECCCCC
Confidence 9999999999999998766
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=9.7e-32 Score=263.13 Aligned_cols=241 Identities=21% Similarity=0.367 Sum_probs=204.5
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEee--cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR--GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK 230 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 230 (471)
-.++.|+||++ ++||+|. |++|+|||+.+++....+. +|...|++|+|+|++. +|++|+.||+|+|||+.+
T Consensus 106 ~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~-----~lasgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 106 YYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-----YLAVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp TTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-----EEEEEETTSCEEEEETTT
T ss_pred ccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCC-----EEEEEECCCeEEEEEcCC
Confidence 35678999975 5888887 9999999999999887665 6778899999999998 899999999999999999
Q ss_pred CcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc------cccccCCCCcceEEEEECCCCCEEEEEecCCeE
Q psy11350 231 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP------LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304 (471)
Q Consensus 231 ~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~------~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 304 (471)
++.+..+.+|.. .+.++.+ ++.++++++.|+.+.++.. ...+.+| ...+..+.|+|+++++++++.|+.+
T Consensus 179 ~~~~~~~~~h~~-~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h-~~~~~~~~~~~~g~~l~s~~~D~~v 254 (420)
T 4gga_A 179 QKRLRNMTSHSA-RVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGH-SQEVCGLRWAPDGRHLASGGNDNLV 254 (420)
T ss_dssp TEEEEEECCCSS-CEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECC-SSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CcEEEEEeCCCC-ceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEeccc-ccceeeeeecCCCCeeeeeeccccc
Confidence 999999998876 7777766 5789999999999766432 2345566 5689999999999999999999999
Q ss_pred EEEECCCCc----EEEEeeCCCCCeEEEEEeCCC-CEEEE--EeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCC
Q psy11350 305 RLWDLNQGQ----EVLHQEGHGKPVYCMSFQGDG-SVVAT--GGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY 377 (471)
Q Consensus 305 ~iwd~~~~~----~~~~~~~~~~~v~~~~~s~d~-~~l~t--~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~ 377 (471)
++||..+++ .+.....|...|.+++|+|++ .++++ |+.|++|++||+.+++++..+..| ..+.++.|+|++.
T Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~ 333 (420)
T 4gga_A 255 NVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYK 333 (420)
T ss_dssp EEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTT
T ss_pred eEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCC
Confidence 999998765 356677899999999999954 45555 457999999999999999888755 6799999999999
Q ss_pred EEEEEe--CCCcEEEEECCCccchheeccc
Q psy11350 378 HLATGS--EDNAVKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 378 ~l~s~s--~dg~i~iwd~~~~~~~~~~~~~ 405 (471)
.+++++ .||.|+|||+.+++++.++..+
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH 363 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPTMAKVAELKGH 363 (420)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEECCC
T ss_pred eEEEEEecCCCEEEEEECCCCcEEEEEcCC
Confidence 988765 7899999999999988877543
No 88
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-33 Score=272.31 Aligned_cols=242 Identities=12% Similarity=0.136 Sum_probs=192.4
Q ss_pred eeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc---eEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCC
Q psy11350 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE---LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d 220 (471)
....+.+|..+|.+++|+|++++|++|+.||.|++||+.+++ ....+.+|...|.+++|+|++. +|++++.|
T Consensus 47 ~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~d 121 (377)
T 3dwl_C 47 HARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNED-----KFAVGSGA 121 (377)
T ss_dssp ECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSS-----CCEEEESS
T ss_pred EEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCC-----EEEEEecC
Confidence 345567899999999999999999999999999999999877 6777889999999999999988 69999999
Q ss_pred CcEEEEeCCCCc---ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----------------------ccc
Q psy11350 221 GSVKLWSLDKDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----------------------LAN 274 (471)
Q Consensus 221 g~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----------------------~~~ 274 (471)
+.|++||+.+++ ....+.......|.+++|+|+++++++++.|+.+.++.. ...
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (377)
T 3dwl_C 122 RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAE 201 (377)
T ss_dssp SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEEC
T ss_pred CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhc
Confidence 999999998887 466777623349999999999999999999998666543 122
Q ss_pred ccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcE----EEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEe
Q psy11350 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE----VLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350 (471)
Q Consensus 275 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd 350 (471)
+ .| ...|.+++|+|++++|++++.||+|++||+.+++. +..+.+|..+|.+++|+|++++|++|+.++.+ +|+
T Consensus 202 ~-~~-~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~ 278 (377)
T 3dwl_C 202 Y-PS-GGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQ 278 (377)
T ss_dssp C-CC-SSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EEC
T ss_pred c-cC-CceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEE
Confidence 3 44 56799999999999999999999999999999887 77889999999999999999999998866665 666
Q ss_pred CCCCe--e-------------------------E---------EEe----------------cccCcCEEEEEEcCC-CC
Q psy11350 351 LRTGR--C-------------------------I---------MFL----------------EGHLKSVFSVDFSPD-GY 377 (471)
Q Consensus 351 ~~~~~--~-------------------------~---------~~~----------------~~h~~~v~~~~~sp~-~~ 377 (471)
..... . . ..+ ..|...|+++++.+. +.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~ 358 (377)
T 3dwl_C 279 GNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPG 358 (377)
T ss_dssp CCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETT
T ss_pred eCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCC
Confidence 54211 0 0 001 139999999997764 33
Q ss_pred ---EEEEEeCCCcEEEEEC
Q psy11350 378 ---HLATGSEDNAVKIWDL 393 (471)
Q Consensus 378 ---~l~s~s~dg~i~iwd~ 393 (471)
.|+|||.||.|++||+
T Consensus 359 ~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 359 NITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEEEEEETTSEEEEECC
T ss_pred ceEEEEeecCCCcEEEecC
Confidence 6999999999999986
No 89
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=9.4e-33 Score=271.15 Aligned_cols=246 Identities=20% Similarity=0.379 Sum_probs=212.3
Q ss_pred eeeecCCcCeEEEEEecC-CCEEEEEeCCCcEEEEeCCC----------CceEEEeecCCCCEEEEEEeeCCCCCCccEE
Q psy11350 146 CSQVGDTRPISYCSFSPD-SQHVATASWSGLCKLWTVPE----------CELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214 (471)
Q Consensus 146 ~~~~gh~~~V~~~~~s~~-~~~l~tg~~dg~i~iwd~~~----------~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l 214 (471)
....+|.+.|++++|+|+ +.+||+|+.+|.|++|++.+ ......+.+|...|.+++|+|.+.. +|
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~----~l 197 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNG----YL 197 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTT----EE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCC----eE
Confidence 456789999999999997 68999999999999999976 6778889999999999999999875 79
Q ss_pred EEEeCCCcEEEEeCCCCcc-------eeeecCCCCcceEEEEECC-CCCEEEEEeCCCeEEeccc--------cccccCC
Q psy11350 215 ASCAQDGSVKLWSLDKDTP-------LANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLDTP--------LANLEGH 278 (471)
Q Consensus 215 ~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~v~~~~~s~-~~~~i~~~~~d~~~~~~~~--------~~~~~~~ 278 (471)
++|+.||.|++|++.++.. ...+..|.. .|.+++|+| ++.+|++++.|+.+.++.. ...+..|
T Consensus 198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~ 276 (430)
T 2xyi_A 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA-VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH 276 (430)
T ss_dssp EEECTTSCEEEEETTSCCBGGGEEECSEEECCCSS-CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC
T ss_pred EEEeCCCeEEEEeCCCCCCCCceeccceeecCCCC-CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC
Confidence 9999999999999987432 344555655 899999999 6789999999999776433 2233445
Q ss_pred CCcceEEEEECCCCC-EEEEEecCCeEEEEECCC-CcEEEEeeCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEeCCC--
Q psy11350 279 EPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQ-GQEVLHQEGHGKPVYCMSFQGDGS-VVATGGLDAFGRVWDLRT-- 353 (471)
Q Consensus 279 ~~~~v~~l~~~~~~~-~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~s~d~~-~l~t~~~dg~i~iwd~~~-- 353 (471)
...|++++|+|++. +|++|+.||.|++||+++ .+++..+.+|...|++++|+|++. +|++++.||.|+|||+..
T Consensus 277 -~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 277 -TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp -SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred -CCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 56899999999887 688999999999999998 567888889999999999999884 799999999999999987
Q ss_pred ------------CeeEEEecccCcCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCcc
Q psy11350 354 ------------GRCIMFLEGHLKSVFSVDFSPDGY-HLATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 354 ------------~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~i~iwd~~~~~ 397 (471)
...+..+.+|...|++++|+|++. +|++++.||.|+||++....
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 356 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp CCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred cccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 367778889999999999999998 99999999999999997653
No 90
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.2e-32 Score=267.06 Aligned_cols=250 Identities=18% Similarity=0.300 Sum_probs=214.6
Q ss_pred eeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEee--CCCCCCccEEEEEeCCC
Q psy11350 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP--LPSEGAVCSLASCAQDG 221 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~--~~~~~~~~~l~s~~~dg 221 (471)
....+.+|.++|++++|+|++ +|++|+.||+|++||+.+++.+..+.+|...|.+++|++ ++. ++++|+.||
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~-----~l~s~s~d~ 227 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIK-----YIVTGSRDN 227 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCE-----EEEEEETTS
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCC-----EEEEEcCCC
Confidence 455677999999999999988 999999999999999999999999999999999999996 334 799999999
Q ss_pred cEEEEeCCCCcce-----------------------eeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cc
Q psy11350 222 SVKLWSLDKDTPL-----------------------ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LA 273 (471)
Q Consensus 222 ~i~iwd~~~~~~~-----------------------~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~ 273 (471)
+|++||+.++... ..+.+|.. .+.++ ++++.++++++.|+.+.++.. ..
T Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 304 (464)
T 3v7d_B 228 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA-SVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLY 304 (464)
T ss_dssp CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS-CEEEE--EEETTEEEEEETTSCEEEEETTTTEEEE
T ss_pred cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc-eEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 9999999876533 23444443 55554 688999999999999777542 34
Q ss_pred cccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCC
Q psy11350 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT 353 (471)
Q Consensus 274 ~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~ 353 (471)
.+.+| ...|.+++|+|++++|++++.||.|++||+++++++..+.+|...|.+++|+ +.+|++|+.||.|++||+.+
T Consensus 305 ~~~~~-~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 305 ILSGH-TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp EECCC-SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred EecCC-CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC
Confidence 45566 5689999999999999999999999999999999999999999999999997 57999999999999999999
Q ss_pred CeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccCC
Q psy11350 354 GRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLP 407 (471)
Q Consensus 354 ~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 407 (471)
+....... |...+..++|+|++.+|++|+ ||.|++||+++++++..+.....
T Consensus 382 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~ 433 (464)
T 3v7d_B 382 YSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDA 433 (464)
T ss_dssp CCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTC
T ss_pred Cceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCC
Confidence 88776654 667788899999999999998 89999999999998876443333
No 91
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.7e-32 Score=265.08 Aligned_cols=235 Identities=18% Similarity=0.187 Sum_probs=198.7
Q ss_pred ecCCcCeEEEEEec-CCCEEEEEeCCCcEEEEeCCCCceEEEeecC---CCCEEEEEEeeCCCCCCccEEEEEeCCCcEE
Q psy11350 149 VGDTRPISYCSFSP-DSQHVATASWSGLCKLWTVPECELVQTFRGH---DCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 149 ~gh~~~V~~~~~s~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h---~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 224 (471)
.+|...|.+++|+| ++.+|++++.||.|++||+.+ ..+..+..| ...|.+++|+|++. +|++++.||.|+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~d~~i~ 188 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQ-----MLATGDSTGRLL 188 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTT-----EEEEEETTSEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCC-----EEEEECCCCCEE
Confidence 47999999999999 789999999999999999985 556666544 48899999999988 799999999999
Q ss_pred EEeCCCCcceeeecCCCCcceEEEEECCCCC-EEEEEeCCCeEEeccccc--------cccCCCCcceEEEEECC-CCCE
Q psy11350 225 LWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLDTPLA--------NLEGHEPFRVSRIKFHP-SGRF 294 (471)
Q Consensus 225 iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~i~~~~~d~~~~~~~~~~--------~~~~~~~~~v~~l~~~~-~~~~ 294 (471)
+||+ +++.+..+..|.. .|.+++|+|++. ++++++.|+.+.++.... ....| ...|.+++|+| ++++
T Consensus 189 i~d~-~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~ 265 (383)
T 3ei3_B 189 LLGL-DGHEIFKEKLHKA-KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPH-EKPVNAAYFNPTDSTK 265 (383)
T ss_dssp EEET-TSCEEEEEECSSS-CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEEC-SSCEEEEEECTTTSCE
T ss_pred EEEC-CCCEEEEeccCCC-cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecC-CCceEEEEEcCCCCCE
Confidence 9999 6778888888776 899999999999 999999999977754321 11234 66899999999 9999
Q ss_pred EEEEecCCeEEEEECCCCcEEEEeeCCC-----------------CCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeE
Q psy11350 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHG-----------------KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI 357 (471)
Q Consensus 295 l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----------------~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~ 357 (471)
|++++.|+.|++||+++++.+..+.+|. ..+..++|+|++++ +|+.|+.|++||+.+++++
T Consensus 266 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~ 343 (383)
T 3ei3_B 266 LLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLV 343 (383)
T ss_dssp EEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEE
T ss_pred EEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCcee
Confidence 9999999999999999887766555442 34445677777766 7789999999999999999
Q ss_pred EEecc--cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 358 MFLEG--HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 358 ~~~~~--h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
..+.+ |...+..++|+|++++|++|+ ||.|++||+++
T Consensus 344 ~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 344 HQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred eeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 99987 557788889999999999997 99999999874
No 92
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.7e-31 Score=249.36 Aligned_cols=242 Identities=19% Similarity=0.311 Sum_probs=205.3
Q ss_pred eeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEE
Q psy11350 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 226 (471)
.+.+|...|++++|+|++++|++|+.||+|++||+.+++.+..+.+|...+.++.+.+ . ++++++.++.+++|
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~--~-----~l~s~~~~~~~~~~ 134 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS--Y-----ILSSGSRSGHIHHH 134 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEET--T-----EEEEEETTSEEEEE
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCC--C-----EEEEEecCCceEee
Confidence 3457899999999999999999999999999999999999999999999988776654 3 79999999999999
Q ss_pred eCCCCc-ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccc--------cccCCCCcceEEEEECCCCCEE--
Q psy11350 227 SLDKDT-PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA--------NLEGHEPFRVSRIKFHPSGRFL-- 295 (471)
Q Consensus 227 d~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~--------~~~~~~~~~v~~l~~~~~~~~l-- 295 (471)
+..... .+..+..|.. .+..+.+++++.++++++.|+.+.++.... .........|.++.++|++..+
T Consensus 135 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 213 (318)
T 4ggc_A 135 DVRVAEHHVATLSGHSQ-EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLA 213 (318)
T ss_dssp ETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEE
T ss_pred ecCCCceeEEEEcCccC-ceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEE
Confidence 987764 4455666665 899999999999999999999977754321 1112224579999999976633
Q ss_pred -EEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEe--CCCeEEEEeCCCCeeEEEecccCcCEEEEEE
Q psy11350 296 -GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG--LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372 (471)
Q Consensus 296 -~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 372 (471)
++++.+++|++||.......... .+...+..+.|+|++..+++++ .|+.|+|||+++++++..+.+|.+.|++++|
T Consensus 214 ~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~ 292 (318)
T 4ggc_A 214 TGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTM 292 (318)
T ss_dssp EEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 46678899999999988766554 4677899999999998877654 7999999999999999999999999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCcc
Q psy11350 373 SPDGYHLATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 373 sp~~~~l~s~s~dg~i~iwd~~~~~ 397 (471)
+|+|++|+||+.||+|+|||+....
T Consensus 293 spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 293 SPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp CTTSSCEEEEETTTEEEEECCSCCC
T ss_pred cCCCCEEEEEecCCeEEEEECCCCC
Confidence 9999999999999999999997654
No 93
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.9e-32 Score=251.06 Aligned_cols=202 Identities=21% Similarity=0.345 Sum_probs=175.3
Q ss_pred EEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC--CcceeeecCCCCcceEEEEECCC--CCEEEEEeCC
Q psy11350 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK--DTPLANLEGHEPFRVSRIKFHPS--GRFLGTCCWD 263 (471)
Q Consensus 188 ~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~v~~~~~s~~--~~~i~~~~~d 263 (471)
..+.+|...|.+++|+|++. +|++|+.|++|+|||+.. .+.+..+.+|.. .|.+++|+++ +.+|++++.|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~-----~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~-~V~~v~~s~~~~g~~l~s~s~D 76 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGK-----RMATCSSDKTIKIFEVEGETHKLIDTLTGHEG-PVWRVDWAHPKFGTILASCSYD 76 (297)
T ss_dssp EECCSCSSCEEEEEECTTSS-----EEEEEETTSCEEEEEBCSSCBCCCEEECCCSS-CEEEEEECCGGGCSEEEEEETT
T ss_pred eeccCCcCceEEEEECCCCC-----EEEEEeCCCEEEEEecCCCCcEEEEEEccccC-CeEEEEecCCCcCCEEEEEcCC
Confidence 45678999999999999998 799999999999999974 367788888887 8999999874 8999999999
Q ss_pred CeEEecccc-------ccccCCCCcceEEEEECCC--CCEEEEEecCCeEEEEECCCCc--EEEEeeCCCCCeEEEEEeC
Q psy11350 264 HSWRLDTPL-------ANLEGHEPFRVSRIKFHPS--GRFLGTCCWDHSWRLWDLNQGQ--EVLHQEGHGKPVYCMSFQG 332 (471)
Q Consensus 264 ~~~~~~~~~-------~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~s~ 332 (471)
+.+++|... ..+..| ...|.+++|+|+ +.+|++++.|++|++||++++. ....+.+|...|.+++|+|
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p 155 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 155 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECC
T ss_pred CEEEEEEcCCCceEEEEEeecC-CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecC
Confidence 998776432 223445 568999999997 8899999999999999998763 2456788999999999999
Q ss_pred C-------------CCEEEEEeCCCeEEEEeCCCCe----eEEEecccCcCEEEEEEcCCC---CEEEEEeCCCcEEEEE
Q psy11350 333 D-------------GSVVATGGLDAFGRVWDLRTGR----CIMFLEGHLKSVFSVDFSPDG---YHLATGSEDNAVKIWD 392 (471)
Q Consensus 333 d-------------~~~l~t~~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~~~~sp~~---~~l~s~s~dg~i~iwd 392 (471)
+ +++|++|+.|+.|++||++++. ....+.+|...|.+++|+|++ .+|++|+.|++|+|||
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd 235 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWT 235 (297)
T ss_dssp CC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred CcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEE
Confidence 7 5799999999999999998765 667889999999999999984 8999999999999999
Q ss_pred CCCc
Q psy11350 393 LRKR 396 (471)
Q Consensus 393 ~~~~ 396 (471)
+++.
T Consensus 236 ~~~~ 239 (297)
T 2pm7_B 236 QDNE 239 (297)
T ss_dssp ESST
T ss_pred eCCC
Confidence 8764
No 94
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-31 Score=263.82 Aligned_cols=244 Identities=14% Similarity=0.072 Sum_probs=204.7
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc---eEEEeec-------------------------------------
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECE---LVQTFRG------------------------------------- 192 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~---~~~~~~~------------------------------------- 192 (471)
.++.+++|+|+|++|++++ ++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~-~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII-KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE-TTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEEe-CCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 5889999999999777765 8899999999998 6665553
Q ss_pred -----------------CCCCEEEEEEeeCCCCCCccEE-EEEeCCCcEEEEeCC--CCcceeeecCC-CCcceEEEEEC
Q psy11350 193 -----------------HDCNVGAIEFHPLPSEGAVCSL-ASCAQDGSVKLWSLD--KDTPLANLEGH-EPFRVSRIKFH 251 (471)
Q Consensus 193 -----------------h~~~v~~l~~~~~~~~~~~~~l-~s~~~dg~i~iwd~~--~~~~~~~~~~~-~~~~v~~~~~s 251 (471)
|...|.+++|+|++. +| ++++.||.|++||+. +++.+..+..+ ....|.+++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-----~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 158 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDES-----RLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIA 158 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSS-----EEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEEC
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCC-----EEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEc
Confidence 333799999999998 54 899999999999998 88888877632 23389999999
Q ss_pred CCCCEEEEEeCCCeEEec---cc------cccccCCCCcceEEEEECCC---CCEEEEEecCCeEEEEECCCCcEEEE-e
Q psy11350 252 PSGRFLGTCCWDHSWRLD---TP------LANLEGHEPFRVSRIKFHPS---GRFLGTCCWDHSWRLWDLNQGQEVLH-Q 318 (471)
Q Consensus 252 ~~~~~i~~~~~d~~~~~~---~~------~~~~~~~~~~~v~~l~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~-~ 318 (471)
|++++|++++.++.+.++ .. ...+.+| ...|.+++|+|+ +++|++++.|++|++||+.+++.+.. +
T Consensus 159 p~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 159 EDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGH-VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL 237 (450)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEEC-SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC
T ss_pred CCCCEEEEEeCCCcEEEEecCCcccccccceeeecc-cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee
Confidence 999999999999985543 21 1144555 568999999999 99999999999999999999988877 5
Q ss_pred eCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEeccc-------------------------CcCEEEEEEc
Q psy11350 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH-------------------------LKSVFSVDFS 373 (471)
Q Consensus 319 ~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h-------------------------~~~v~~~~~s 373 (471)
.+|...|.+++|+ ++.+|++|+.|+.|++||+++++++..+..+ ...|.+++|+
T Consensus 238 ~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 316 (450)
T 2vdu_B 238 FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS 316 (450)
T ss_dssp CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence 6899999999999 9999999999999999999999988877632 3569999999
Q ss_pred CCCCEEEEEe-CCCcEEEEEC--CCc---cchheecc
Q psy11350 374 PDGYHLATGS-EDNAVKIWDL--RKR---RLLKWCTQ 404 (471)
Q Consensus 374 p~~~~l~s~s-~dg~i~iwd~--~~~---~~~~~~~~ 404 (471)
|++++|++++ .|+.|++|++ ..+ +.+..+..
T Consensus 317 ~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~ 353 (450)
T 2vdu_B 317 KNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITF 353 (450)
T ss_dssp SSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEEC
T ss_pred CCCCEEEEEECCCCeEEEEEeccCCCCceeeccEecc
Confidence 9999999999 8999999999 555 45555543
No 95
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.7e-31 Score=249.35 Aligned_cols=238 Identities=20% Similarity=0.345 Sum_probs=197.8
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEee--cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCC
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR--GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKD 231 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 231 (471)
.+++|+||+++ +||+|. |++|+|||+.+++++..+. +|...|++++|+|++. +|++|+.||+|++||+.++
T Consensus 27 y~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~-----~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-----YLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp TCBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-----EEEEEETTSEEEEEETTTT
T ss_pred cceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCC-----EEEEEECCCcEEEeecCCc
Confidence 35779999986 788776 9999999999999888775 6778899999999998 7999999999999999999
Q ss_pred cceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecc------ccccccCCCCcceEEEEECCCCCEEEEEecCCeEE
Q psy11350 232 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT------PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR 305 (471)
Q Consensus 232 ~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~------~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 305 (471)
+++..+.+|.. .+.+ +++++..+++++.++.+.++. ....+.+| ...+..+.+++++++|++++.||+|+
T Consensus 100 ~~~~~~~~h~~-~~~~--~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~s~~~d~~i~ 175 (318)
T 4ggc_A 100 KRLRNMTSHSA-RVGS--LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGH-SQEVCGLRWAPDGRHLASGGNDNLVN 175 (318)
T ss_dssp EEEEEEECCSS-CEEE--EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC-SSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeEEEecCccc-eEEE--eecCCCEEEEEecCCceEeeecCCCceeEEEEcCc-cCceEEEEEcCCCCEEEEEecCccee
Confidence 99999988875 4544 556678999999999866532 22344555 55799999999999999999999999
Q ss_pred EEECCCCcE----EEEeeCCCCCeEEEEEeCCCC-E--EEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCE
Q psy11350 306 LWDLNQGQE----VLHQEGHGKPVYCMSFQGDGS-V--VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378 (471)
Q Consensus 306 iwd~~~~~~----~~~~~~~~~~v~~~~~s~d~~-~--l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 378 (471)
+||+++++. ......|...|.+++++|++. . +++++.++.|++||........... +...+..+.|+|++..
T Consensus 176 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 254 (318)
T 4ggc_A 176 VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKE 254 (318)
T ss_dssp EEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTE
T ss_pred EEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccc
Confidence 999987653 345667889999999999665 3 3466788999999999888776554 6788999999999998
Q ss_pred EEEEe--CCCcEEEEECCCccchheec
Q psy11350 379 LATGS--EDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 379 l~s~s--~dg~i~iwd~~~~~~~~~~~ 403 (471)
+++++ .|+.|++||+++++++.++.
T Consensus 255 ~~~~sg~~d~~i~iwd~~~~~~~~~l~ 281 (318)
T 4ggc_A 255 LISGHGFAQNQLVIWKYPTMAKVAELK 281 (318)
T ss_dssp EEEEECTTTCCEEEEETTTCCEEEEEC
T ss_pred eEEEEEcCCCEEEEEECCCCcEEEEEc
Confidence 87765 79999999999998887654
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-32 Score=287.20 Aligned_cols=254 Identities=12% Similarity=0.077 Sum_probs=194.0
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEE--ee---c-------------CCCCEEEEEEeeCCCCCC-
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT--FR---G-------------HDCNVGAIEFHPLPSEGA- 210 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~--~~---~-------------h~~~v~~l~~~~~~~~~~- 210 (471)
+|...|++++|+|+|++||+|+.||.|++||+.+++++.. +. . |..+|.+++|++......
T Consensus 209 ~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~ 288 (902)
T 2oaj_A 209 KRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYT 288 (902)
T ss_dssp CBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEE
T ss_pred ccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCC
Confidence 4578899999999999999999999999999999887653 21 2 345799999965311000
Q ss_pred ---------------------------------------------------------------------------ccEEE
Q psy11350 211 ---------------------------------------------------------------------------VCSLA 215 (471)
Q Consensus 211 ---------------------------------------------------------------------------~~~l~ 215 (471)
...++
T Consensus 289 ~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~ 368 (902)
T 2oaj_A 289 SLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLIL 368 (902)
T ss_dssp EEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEE
T ss_pred EEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEE
Confidence 00234
Q ss_pred EEeCCCcEEEEeCCCCcceee-------ecCCCC---------------------------------cceEEEEECCCCC
Q psy11350 216 SCAQDGSVKLWSLDKDTPLAN-------LEGHEP---------------------------------FRVSRIKFHPSGR 255 (471)
Q Consensus 216 s~~~dg~i~iwd~~~~~~~~~-------~~~~~~---------------------------------~~v~~~~~s~~~~ 255 (471)
+++.||.|++||+.++..... +..+.. ..+.+++|+|+++
T Consensus 369 ~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~ 448 (902)
T 2oaj_A 369 LILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGT 448 (902)
T ss_dssp EEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEE
T ss_pred EEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCc
Confidence 455567777777765532211 111211 1233455678999
Q ss_pred EEEEEeCCCeEEecccccc-c---------------cCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCc------
Q psy11350 256 FLGTCCWDHSWRLDTPLAN-L---------------EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ------ 313 (471)
Q Consensus 256 ~i~~~~~d~~~~~~~~~~~-~---------------~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~------ 313 (471)
++++|+.|+++++|..... + .+| ...|.+++|+|++++||+|+.||+|+|||+.+++
T Consensus 449 ~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h-~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~ 527 (902)
T 2oaj_A 449 AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAK-ELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVEN 527 (902)
T ss_dssp EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSS-SCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC-----
T ss_pred EEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCC-CCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccc
Confidence 9999999999888653221 1 034 5579999999999999999999999999997652
Q ss_pred ---------------------------------------EEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCC
Q psy11350 314 ---------------------------------------EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354 (471)
Q Consensus 314 ---------------------------------------~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~ 354 (471)
++..+.+|.+.|++++|+||| +||+|+.|++|+|||++++
T Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 528 RPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp ----------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTT
T ss_pred cCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCC
Confidence 366778899999999999999 9999999999999999888
Q ss_pred eeEE-----Eec-ccCcCEEEEEEc-----CCC---CEEEEEeCCCcEEEEEC---CCccchheeccc
Q psy11350 355 RCIM-----FLE-GHLKSVFSVDFS-----PDG---YHLATGSEDNAVKIWDL---RKRRLLKWCTQL 405 (471)
Q Consensus 355 ~~~~-----~~~-~h~~~v~~~~~s-----p~~---~~l~s~s~dg~i~iwd~---~~~~~~~~~~~~ 405 (471)
..+. .+. +|...|++++|+ ||| .+|++|+.|++|++||+ .+|+.+..+..+
T Consensus 607 ~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~ 674 (902)
T 2oaj_A 607 AIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDI 674 (902)
T ss_dssp EEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEE
T ss_pred eEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCc
Confidence 7654 233 899999999999 885 89999999999999999 777776666544
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.7e-32 Score=266.83 Aligned_cols=247 Identities=22% Similarity=0.357 Sum_probs=209.4
Q ss_pred eeeeecCCcCeEEEEEec-CCCEEEEEeCCCcEEEEeCCCC-------ceEEEeecCCCCEEEEEEeeCCCCCCccEEEE
Q psy11350 145 YCSQVGDTRPISYCSFSP-DSQHVATASWSGLCKLWTVPEC-------ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLAS 216 (471)
Q Consensus 145 ~~~~~gh~~~V~~~~~s~-~~~~l~tg~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s 216 (471)
...+.+|..+|++++|+| ++++|++|+.||.|+|||+.++ +.+..+.+|...|.+++|+|++.. +|++
T Consensus 74 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~----~l~s 149 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQN----VLLS 149 (402)
T ss_dssp CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTT----EEEE
T ss_pred CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCC----EEEE
Confidence 445679999999999999 9999999999999999999987 678889999999999999999843 8999
Q ss_pred EeCCCcEEEEeCCCCcceeee--cCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccc-cCCCCcceEEEEE
Q psy11350 217 CAQDGSVKLWSLDKDTPLANL--EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANL-EGHEPFRVSRIKF 288 (471)
Q Consensus 217 ~~~dg~i~iwd~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~-~~~~~~~v~~l~~ 288 (471)
++.||.|++||+.+++.+..+ ..|.. .|.+++|+|++.+|++++.|+.+.++.. ...+ ..|....+.++.|
T Consensus 150 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 150 AGCDNVILVWDVGTGAAVLTLGPDVHPD-TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp EETTSCEEEEETTTTEEEEEECTTTCCS-CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE
T ss_pred EcCCCEEEEEECCCCCccEEEecCCCCC-ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE
Confidence 999999999999999999888 55655 8999999999999999999999777543 2334 4564545899999
Q ss_pred CCCCCEEEEE---ecCCeEEEEECCCCcE-EEEe-eCCCCCeEEEEEeCCCCEEEE-EeCCCeEEEEeCCCCee-EEEec
Q psy11350 289 HPSGRFLGTC---CWDHSWRLWDLNQGQE-VLHQ-EGHGKPVYCMSFQGDGSVVAT-GGLDAFGRVWDLRTGRC-IMFLE 361 (471)
Q Consensus 289 ~~~~~~l~~~---~~dg~i~iwd~~~~~~-~~~~-~~~~~~v~~~~~s~d~~~l~t-~~~dg~i~iwd~~~~~~-~~~~~ 361 (471)
+|++.+|++| +.|+.|++||+++++. +... ..|...+.+++|+|++++|++ |+.||.|++||+.++++ +..+.
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred cCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeec
Confidence 9999999999 7899999999998754 3332 357788999999999998865 55799999999998874 44444
Q ss_pred c--cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccc
Q psy11350 362 G--HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398 (471)
Q Consensus 362 ~--h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 398 (471)
. |...|.+++|+|++.++++ .++.+++|++.++++
T Consensus 309 ~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 309 MFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred ccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 3 5589999999999988775 567999999988754
No 98
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2e-30 Score=255.71 Aligned_cols=242 Identities=25% Similarity=0.508 Sum_probs=216.5
Q ss_pred ceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCc
Q psy11350 143 SIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGS 222 (471)
Q Consensus 143 ~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 222 (471)
.....+.+|..+|.+++|+ +++|++|+.||.|++||+.+++.+..+.+|...|.++.|++ . .+++|+.||+
T Consensus 150 ~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~-----~l~s~s~dg~ 220 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--K-----RVVSGSRDAT 220 (445)
T ss_dssp CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET--T-----EEEEEETTSE
T ss_pred cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC--C-----EEEEEeCCCE
Confidence 3445677999999999998 57999999999999999999999999999999999999964 3 6999999999
Q ss_pred EEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCCCEEEE
Q psy11350 223 VKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLGT 297 (471)
Q Consensus 223 i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~~ 297 (471)
|++||+.+++.+..+..|.. .+.++.| ++.++++++.|+.+.++.. ...+.+| ...|.++.| ++.++++
T Consensus 221 i~~wd~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~ 294 (445)
T 2ovr_B 221 LRVWDIETGQCLHVLMGHVA-AVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGH-TNRVYSLQF--DGIHVVS 294 (445)
T ss_dssp EEEEESSSCCEEEEEECCSS-CEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCC-SSCEEEEEE--CSSEEEE
T ss_pred EEEEECCCCcEEEEEcCCcc-cEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCC-CCceEEEEE--CCCEEEE
Confidence 99999999999999988876 8999999 7899999999999777542 3445556 557999999 7899999
Q ss_pred EecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecc---cCcCEEEEEEcC
Q psy11350 298 CCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG---HLKSVFSVDFSP 374 (471)
Q Consensus 298 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~~~~sp 374 (471)
++.||.|++||+++++.+..+.+|...+.++.++ +.+|++|+.||.|++||+++++++..+.+ |...|++++|+
T Consensus 295 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~- 371 (445)
T 2ovr_B 295 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN- 371 (445)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC-
T ss_pred EeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC-
Confidence 9999999999999999999999999999988875 66999999999999999999999999886 88899999995
Q ss_pred CCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 375 DGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 375 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
+.+|++|+.||.|++||+.+++.+..+.
T Consensus 372 -~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 399 (445)
T 2ovr_B 372 -KNFVITSSDDGTVKLWDLKTGEFIRNLV 399 (445)
T ss_dssp -SSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred -CCEEEEEeCCCeEEEEECCCCceeeeee
Confidence 6899999999999999999999888773
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.5e-31 Score=255.68 Aligned_cols=235 Identities=12% Similarity=0.130 Sum_probs=185.1
Q ss_pred eecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe
Q psy11350 148 QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227 (471)
Q Consensus 148 ~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 227 (471)
..+|..+|++++|+|||++|++|+.+| ++||++.+++....... ..+..+++.+.++. ++++++.|++|++||
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNY----VAFVTGVKEVVHIWD 87 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSE----EEEECSSTTEEEEEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCE----EEEEECCccEEEEEE
Confidence 357999999999999999999998665 78999988776655443 24778888887762 346788889999999
Q ss_pred CCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccc---cccCCCCcceEEEEECCCCCEEEE--EecCC
Q psy11350 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA---NLEGHEPFRVSRIKFHPSGRFLGT--CCWDH 302 (471)
Q Consensus 228 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~---~~~~~~~~~v~~l~~~~~~~~l~~--~~~dg 302 (471)
+.+++++..+..+. .|.++.++++. ++++ .++.+.++.... .+... ..+...+++++ .++++ |+.||
T Consensus 88 ~~~~~~~~~~~~~~--~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~-~~~~~~~~~s~--~~la~~sg~~~g 159 (355)
T 3vu4_A 88 DVKKQDVSRIKVDA--PVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDD-IRFGGVCEFSN--GLLVYSNEFNLG 159 (355)
T ss_dssp TTTTEEEEEEECSS--CEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCC-EEEEEEEEEET--TEEEEEESSCTT
T ss_pred CCCCcEEEEEECCC--ceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEe-ccCCceEEEEc--cEEEEeCCCcCc
Confidence 99999988887443 79999999875 3333 356655543221 11111 11445566777 66666 58899
Q ss_pred eEEEEECCCCc---------------E-EEEeeCCCCCeEEEEEeCCCCEEEEEeCCCe-EEEEeCCCCeeEEEec-c-c
Q psy11350 303 SWRLWDLNQGQ---------------E-VLHQEGHGKPVYCMSFQGDGSVVATGGLDAF-GRVWDLRTGRCIMFLE-G-H 363 (471)
Q Consensus 303 ~i~iwd~~~~~---------------~-~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~-i~iwd~~~~~~~~~~~-~-h 363 (471)
.|++||+.+++ + +..+.+|..+|++++|+|+|++|++|+.|++ |+|||+++++++..+. + |
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h 239 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD 239 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 99999999865 2 6788999999999999999999999999998 9999999999999998 5 9
Q ss_pred CcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc
Q psy11350 364 LKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 364 ~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~ 397 (471)
...|.+++|+|+|++|++++.|++|++||++.+.
T Consensus 240 ~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 240 RADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp CSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9999999999999999999999999999998764
No 100
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5e-32 Score=266.41 Aligned_cols=247 Identities=19% Similarity=0.220 Sum_probs=195.3
Q ss_pred eeeeeecCCcCeEEEEEec-CCCEEEEEeCCCcEEEEeCCCCceEEEeec--CCCCEEEEEEeeCCCCCCccEEEEEeCC
Q psy11350 144 IYCSQVGDTRPISYCSFSP-DSQHVATASWSGLCKLWTVPECELVQTFRG--HDCNVGAIEFHPLPSEGAVCSLASCAQD 220 (471)
Q Consensus 144 ~~~~~~gh~~~V~~~~~s~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~~~~~l~s~~~d 220 (471)
....+.||.++|++++|+| ++.+|++|+.||+|++||+.++........ +...+.+++|+|++. +|++|+.|
T Consensus 156 ~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~g~~d 230 (435)
T 4e54_B 156 TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSR-----MVVTGDNV 230 (435)
T ss_dssp EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTT-----EEEEECSS
T ss_pred eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCC-----EEEEEeCC
Confidence 3445679999999999998 689999999999999999986544333332 344678999999998 89999999
Q ss_pred CcEEEEeCCCCcceeeecCCCCcceEEEEECCCCC-EEEEEeCCCeEEecccc--------ccccCCCCcceEEEEECCC
Q psy11350 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLDTPL--------ANLEGHEPFRVSRIKFHPS 291 (471)
Q Consensus 221 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~i~~~~~d~~~~~~~~~--------~~~~~~~~~~v~~l~~~~~ 291 (471)
|.|++||+. ++.+..+..|.. .|.+++|+|++. ++++++.|+.+.+|... ....+| ...|++++|+|+
T Consensus 231 g~i~~wd~~-~~~~~~~~~h~~-~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~spd 307 (435)
T 4e54_B 231 GNVILLNMD-GKELWNLRMHKK-KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPH-RHPVNAACFSPD 307 (435)
T ss_dssp SBEEEEESS-SCBCCCSBCCSS-CEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBC-SSCEEECCBCTT
T ss_pred CcEeeeccC-cceeEEEecccc-eEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeec-cccccceeECCC
Confidence 999999985 566777777776 899999999987 67789999986664321 112334 568999999999
Q ss_pred CCEEEEEecCCeEEEEECCCCcEEEEeeCCCC------CeEEEEEeCCCCEEEEEe------------CCCeEEEEeCCC
Q psy11350 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK------PVYCMSFQGDGSVVATGG------------LDAFGRVWDLRT 353 (471)
Q Consensus 292 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~v~~~~~s~d~~~l~t~~------------~dg~i~iwd~~~ 353 (471)
+++|++++.||+|++||+.++.....+..|.. .+....|+|++.++++++ .++.|++||..+
T Consensus 308 g~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~ 387 (435)
T 4e54_B 308 GARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS 387 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS
T ss_pred CCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC
Confidence 99999999999999999999988777766543 233456777777766654 235799999999
Q ss_pred CeeEEEec-ccCcCEEEE-EEcCCCCEEEEEeCCCcEEEEECCCccch
Q psy11350 354 GRCIMFLE-GHLKSVFSV-DFSPDGYHLATGSEDNAVKIWDLRKRRLL 399 (471)
Q Consensus 354 ~~~~~~~~-~h~~~v~~~-~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 399 (471)
++.+..+. +|...|.++ +|+|+|.+|++|+ |++|+|||++.+++.
T Consensus 388 g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 388 GKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp CCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred CcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 99888765 688888887 6999999999876 889999999998764
No 101
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.4e-31 Score=261.54 Aligned_cols=241 Identities=24% Similarity=0.467 Sum_probs=205.2
Q ss_pred ceeeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCc
Q psy11350 143 SIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGS 222 (471)
Q Consensus 143 ~~~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 222 (471)
.....+.+|..+|.+++| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|++. .+++|+.||.
T Consensus 164 ~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~-------~l~s~s~dg~ 234 (435)
T 1p22_A 164 ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG-------MMVTCSKDRS 234 (435)
T ss_dssp CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTT-------EEEEEETTSC
T ss_pred eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCC-------EEEEeeCCCc
Confidence 345567799999999998 7899999999999999999999999999999999999999742 6999999999
Q ss_pred EEEEeCCCCcce---eeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecc-----ccccccCCCCcceEEEEECCCCCE
Q psy11350 223 VKLWSLDKDTPL---ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-----PLANLEGHEPFRVSRIKFHPSGRF 294 (471)
Q Consensus 223 i~iwd~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~-----~~~~~~~~~~~~v~~l~~~~~~~~ 294 (471)
|++||+.++... ..+.+|.. .|.++.| +++++++++.|+.+.++. ....+.+| ...|.++.| ++++
T Consensus 235 i~vwd~~~~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~v~~~~~--~~~~ 308 (435)
T 1p22_A 235 IAVWDMASPTDITLRRVLVGHRA-AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGH-KRGIACLQY--RDRL 308 (435)
T ss_dssp EEEEECSSSSCCEEEEEECCCSS-CEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEE--ETTE
T ss_pred EEEEeCCCCCCceeeeEecCCCC-cEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCC-CCcEEEEEe--CCCE
Confidence 999999888765 45566665 8999999 889999999999977754 23445566 557999999 4689
Q ss_pred EEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCe---------eEEEecccCc
Q psy11350 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR---------CIMFLEGHLK 365 (471)
Q Consensus 295 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~---------~~~~~~~h~~ 365 (471)
+++|+.||.|++||+++++++..+.+|...|.+++| ++.+|++|+.||.|++||+.++. ++..+.+|.+
T Consensus 309 l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~ 386 (435)
T 1p22_A 309 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG 386 (435)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS
T ss_pred EEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC
Confidence 999999999999999999999999999999999999 78899999999999999997765 7889999999
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchhee
Q psy11350 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 366 ~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
.|.+++| ++.+|++|+.||+|++||+.+.......
T Consensus 387 ~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 421 (435)
T 1p22_A 387 RVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAE 421 (435)
T ss_dssp CCCCEEE--CSSCEEECCSSSEEEEEC----------
T ss_pred CeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccC
Confidence 9999999 7889999999999999999887665543
No 102
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.7e-31 Score=259.91 Aligned_cols=276 Identities=21% Similarity=0.297 Sum_probs=203.6
Q ss_pred CeEEEEEecCCCEEE-EEeCCCcEEEEeCCCC----ceEEEeecCCCCEEEEEEee-CCCCCCccEEEEEeCCCcEEEEe
Q psy11350 154 PISYCSFSPDSQHVA-TASWSGLCKLWTVPEC----ELVQTFRGHDCNVGAIEFHP-LPSEGAVCSLASCAQDGSVKLWS 227 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~-tg~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~~~-~~~~~~~~~l~s~~~dg~i~iwd 227 (471)
....++++|+...++ +++.+|.|+||++.+. ..+..+.+|...|.+++|+| ++. +|++|+.||+|++||
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~-----~l~s~s~dg~v~vw~ 110 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDN-----VIASGSEDCTVMVWE 110 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTT-----EEEEEETTSEEEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCC-----EEEEEeCCCeEEEEE
Confidence 344678888765444 5788999999998654 23456779999999999999 666 899999999999999
Q ss_pred CCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCC-CEEEEEecCCeEEE
Q psy11350 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSG-RFLGTCCWDHSWRL 306 (471)
Q Consensus 228 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~~~~~dg~i~i 306 (471)
+.++....... .+...+.+| ...|.+++|+|++ ++|++++.||.|++
T Consensus 111 ~~~~~~~~~~~-------------------------------~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~dg~i~i 158 (402)
T 2aq5_A 111 IPDGGLVLPLR-------------------------------EPVITLEGH-TKRVGIVAWHPTAQNVLLSAGCDNVILV 158 (402)
T ss_dssp CCTTCCSSCBC-------------------------------SCSEEEECC-SSCEEEEEECSSBTTEEEEEETTSCEEE
T ss_pred ccCCCCccccC-------------------------------CceEEecCC-CCeEEEEEECcCCCCEEEEEcCCCEEEE
Confidence 98874321110 112223333 3479999999998 69999999999999
Q ss_pred EECCCCcEEEEe--eCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEe-cccCcC-EEEEEEcCCCCEEEEE
Q psy11350 307 WDLNQGQEVLHQ--EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL-EGHLKS-VFSVDFSPDGYHLATG 382 (471)
Q Consensus 307 wd~~~~~~~~~~--~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~-~~h~~~-v~~~~~sp~~~~l~s~ 382 (471)
||+++++.+..+ .+|...|++++|+|++.+|++++.||.|++||+++++.+..+ .+|.+. +.++.|+|++.+|++|
T Consensus 159 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 159 WDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp EETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred EECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 999999999998 789999999999999999999999999999999999999988 788776 8999999999999999
Q ss_pred ---eCCCcEEEEECCCccc-hheecccCCCccceeeccccceeeeecccCCCcccccchhhhc----ccccceeeecccc
Q psy11350 383 ---SEDNAVKIWDLRKRRL-LKWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKE----QVEPIPLLLDIQK 454 (471)
Q Consensus 383 ---s~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 454 (471)
+.|+.|++||+++++. +..........+..+.+..+....++.....+...++...... .+........+..
T Consensus 239 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~ 318 (402)
T 2aq5_A 239 FSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRG 318 (402)
T ss_dssp ECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSE
T ss_pred ccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccc
Confidence 7999999999998765 3333222233333333333433333222222222222222111 1122222356889
Q ss_pred eeeeecCCeEEE
Q psy11350 455 LTFKFDSDLHAM 466 (471)
Q Consensus 455 l~fs~dg~~lA~ 466 (471)
++|+|++.+++.
T Consensus 319 ~~~sp~~~~~~s 330 (402)
T 2aq5_A 319 MGYMPKRGLEVN 330 (402)
T ss_dssp EEECCGGGSCGG
T ss_pred eEEeccccccee
Confidence 999999988764
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.2e-30 Score=247.61 Aligned_cols=233 Identities=13% Similarity=0.122 Sum_probs=203.8
Q ss_pred eeecCCcCeEEEEEecCCC-EEEEEeCCCcEEEEeC-CCCceEEEeec--CCCCEEEEEEeeCCCCCCccEEEEEeCCCc
Q psy11350 147 SQVGDTRPISYCSFSPDSQ-HVATASWSGLCKLWTV-PECELVQTFRG--HDCNVGAIEFHPLPSEGAVCSLASCAQDGS 222 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~~~-~l~tg~~dg~i~iwd~-~~~~~~~~~~~--h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 222 (471)
...+|..+|.+++|+|+++ +|++|+.||.|++||+ .+++. ..+.+ |...|.+++|+| +. +|++++.|+.
T Consensus 51 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~-----~l~s~~~d~~ 123 (342)
T 1yfq_A 51 QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DD-----KLIAASWDGL 123 (342)
T ss_dssp EEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TT-----EEEEEETTSE
T ss_pred eeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CC-----EEEEEcCCCe
Confidence 4458999999999999999 9999999999999999 77755 67788 999999999999 66 7999999999
Q ss_pred EEEEeCCC---------CcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccc-------cccCCCCcceEEE
Q psy11350 223 VKLWSLDK---------DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA-------NLEGHEPFRVSRI 286 (471)
Q Consensus 223 i~iwd~~~---------~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~-------~~~~~~~~~v~~l 286 (471)
|++||+.+ ++++..+. +. ..+.+++|+|++ +++++.++.+.++.... .........+.++
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~-~~-~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i 199 (342)
T 1yfq_A 124 IEVIDPRNYGDGVIAVKNLNSNNTK-VK-NKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDV 199 (342)
T ss_dssp EEEECHHHHTTBCEEEEESCSSSSS-SC-CCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEE
T ss_pred EEEEcccccccccccccCCeeeEEe-eC-CceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEE
Confidence 99999987 77777666 33 389999999988 99999999977654332 1223336689999
Q ss_pred EECC-CCCEEEEEecCCeEEEEECCCC------cEEEEeeCCCC---------CeEEEEEeCCCCEEEEEeCCCeEEEEe
Q psy11350 287 KFHP-SGRFLGTCCWDHSWRLWDLNQG------QEVLHQEGHGK---------PVYCMSFQGDGSVVATGGLDAFGRVWD 350 (471)
Q Consensus 287 ~~~~-~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~---------~v~~~~~s~d~~~l~t~~~dg~i~iwd 350 (471)
+|+| ++++|++++.||.|++|+++.. +....+..|.. .|.+++|+|++++|++++.||.|++||
T Consensus 200 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 200 ALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp EECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred EECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 9999 9999999999999999999887 77778887765 999999999999999999999999999
Q ss_pred CCCCeeEEEeccc-CcCEEEEEEcCCCCEEEEEeCCCc-EEEEE
Q psy11350 351 LRTGRCIMFLEGH-LKSVFSVDFSPDGYHLATGSEDNA-VKIWD 392 (471)
Q Consensus 351 ~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~s~s~dg~-i~iwd 392 (471)
+.+++++..+.+| ...|.+++ |++.+|++|+.||+ .+.|.
T Consensus 280 ~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 280 LQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp TTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred CccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 9999999999998 99999999 99999999999998 55554
No 104
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-31 Score=263.78 Aligned_cols=260 Identities=10% Similarity=0.033 Sum_probs=205.1
Q ss_pred chhhhhhHHHHhhcccccee-eeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCC---CCceEEEeec---------
Q psy11350 126 ATRTARNQELQKHLTSLSIY-CSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVP---ECELVQTFRG--------- 192 (471)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~-~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~---~~~~~~~~~~--------- 192 (471)
.++.++.|++.......... ....+|..+|++++|+|++++|++|+.||.|++||+. +++....+.+
T Consensus 84 ~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~ 163 (437)
T 3gre_A 84 DQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLK 163 (437)
T ss_dssp TTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGG
T ss_pred CCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEcc
Confidence 44555666654421111111 1222699999999999999999999999999999994 5555544432
Q ss_pred ---CCCCEEEEE--EeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecC--CCCcceEEEEECCCCCEEEEEeCCCe
Q psy11350 193 ---HDCNVGAIE--FHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEG--HEPFRVSRIKFHPSGRFLGTCCWDHS 265 (471)
Q Consensus 193 ---h~~~v~~l~--~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~i~~~~~d~~ 265 (471)
+...+.++. +++++. +|++++.||.|++||+.+++++..+.. |.. .|.+++|+|++.++++++.|+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~-----~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~~~dg~ 237 (437)
T 3gre_A 164 NFGKNEYAVRMRAFVNEEKS-----LLVALTNLSRVIIFDIRTLERLQIIENSPRHG-AVSSICIDEECCVLILGTTRGI 237 (437)
T ss_dssp GGSSCCCEEEEEEEECSSCE-----EEEEEETTSEEEEEETTTCCEEEEEECCGGGC-CEEEEEECTTSCEEEEEETTSC
T ss_pred CcccccCceEEEEEEcCCCC-----EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC-ceEEEEECCCCCEEEEEcCCCe
Confidence 455666666 335565 799999999999999999999999887 444 8999999999999999999999
Q ss_pred EEeccc-----cccccCCCCcceEEEEECC----CCCEEEEEecCCeEEEEECCCCcEEEEeeC----------------
Q psy11350 266 WRLDTP-----LANLEGHEPFRVSRIKFHP----SGRFLGTCCWDHSWRLWDLNQGQEVLHQEG---------------- 320 (471)
Q Consensus 266 ~~~~~~-----~~~~~~~~~~~v~~l~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------------- 320 (471)
+.+|.. ...+...+...|.+++|+| ++.+|++++.||.|++||+++++.+..+.+
T Consensus 238 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (437)
T 3gre_A 238 IDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKG 317 (437)
T ss_dssp EEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSS
T ss_pred EEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccc
Confidence 777543 2333322245799996654 677999999999999999999988877764
Q ss_pred ----------CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecc----------------------------
Q psy11350 321 ----------HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG---------------------------- 362 (471)
Q Consensus 321 ----------~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~---------------------------- 362 (471)
|...|++++|+ ++.+|++|+.|+.|++||+.+++++..+.+
T Consensus 318 l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (437)
T 3gre_A 318 LEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTS 396 (437)
T ss_dssp GGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC---
T ss_pred cccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEeccccc
Confidence 44568889999 778999999999999999999887776665
Q ss_pred ---------cCcCEEEEEEcCC--CCEEEEEeCCCcEEEEE
Q psy11350 363 ---------HLKSVFSVDFSPD--GYHLATGSEDNAVKIWD 392 (471)
Q Consensus 363 ---------h~~~v~~~~~sp~--~~~l~s~s~dg~i~iwd 392 (471)
|...|++++|+++ +.+|++|+.||.|+||+
T Consensus 397 ~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 397 THSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ----------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999998 78999999999999995
No 105
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.6e-31 Score=256.48 Aligned_cols=281 Identities=16% Similarity=0.191 Sum_probs=220.8
Q ss_pred CCcEEEEeCCCCceEEEeecCCCCEEEEEEee-CCCCCCccEEEEEeCCCcEEEEeCCCCcceeeec-------------
Q psy11350 173 SGLCKLWTVPECELVQTFRGHDCNVGAIEFHP-LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLE------------- 238 (471)
Q Consensus 173 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------- 238 (471)
++.+++|++..++....+.+|.+.|++++|+| ++. +|++|+.||.|++||+.++.....+.
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGR-----YMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPD 96 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCC-----EEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTT
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCC-----EEEEEcCCCeEEEEECCCCcccceEeccccccccccccc
Confidence 45677888888888888999999999999999 877 89999999999999999887665543
Q ss_pred CCCCcceEEEEECC-CCCEEEEEeCCCeEEeccccc---cccCCCCcceEEEEECCC---CCEEEEEecCCeEEEEECCC
Q psy11350 239 GHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLDTPLA---NLEGHEPFRVSRIKFHPS---GRFLGTCCWDHSWRLWDLNQ 311 (471)
Q Consensus 239 ~~~~~~v~~~~~s~-~~~~i~~~~~d~~~~~~~~~~---~~~~~~~~~v~~l~~~~~---~~~l~~~~~dg~i~iwd~~~ 311 (471)
.|. ..|.+++|+| ++.++++++.|+.+.++.... .........+.++.|+|. +.++++++.+|.|++||+++
T Consensus 97 ~~~-~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 97 VHR-YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CCS-SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred cCC-CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 244 4899999999 788999999999977754321 111112456899999984 44999999999999999999
Q ss_pred CcEEEEeeCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEeCCCCe-eEEEe---------------cccCcCEEEEEEcC
Q psy11350 312 GQEVLHQEGHGKPVYCMSFQGDGS-VVATGGLDAFGRVWDLRTGR-CIMFL---------------EGHLKSVFSVDFSP 374 (471)
Q Consensus 312 ~~~~~~~~~~~~~v~~~~~s~d~~-~l~t~~~dg~i~iwd~~~~~-~~~~~---------------~~h~~~v~~~~~sp 374 (471)
++.+..+.+|...|.+++|+|++. +|++|+.||.|++||++++. ++..+ .+|...|.+++|+|
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 999999999999999999999988 68999999999999998775 44444 57889999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCccchheecccC--------------CCccceeeccccceeeeecccCCCcccccchhhh
Q psy11350 375 DGYHLATGSEDNAVKIWDLRKRRLLKWCTQLL--------------PNSIGVTSLLTDLYIDVLESLNPGIGNIISSALK 440 (471)
Q Consensus 375 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~--------------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 440 (471)
++++|++++.||.|++||+.+++.+..+.... .....++....+..+.+|+.......
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~-------- 327 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI-------- 327 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE--------
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce--------
Confidence 99999999999999999999988765433211 11223334445566666665443322
Q ss_pred cccccce-eeecccceeeeecCCeEEEeecC
Q psy11350 441 EQVEPIP-LLLDIQKLTFKFDSDLHAMVLNQ 470 (471)
Q Consensus 441 ~~~~~~~-~~~~~~~l~fs~dg~~lA~~~~~ 470 (471)
..+. ....+..++|+|+|++||+++.+
T Consensus 328 ---~~~~~~~~~v~~~~~s~~~~~l~s~~~d 355 (408)
T 4a11_B 328 ---TMLKGHYKTVDCCVFQSNFQELYSGSRD 355 (408)
T ss_dssp ---EEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred ---eeeccCCCeEEEEEEcCCCCEEEEECCC
Confidence 1222 22357789999999999998865
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.7e-31 Score=254.06 Aligned_cols=229 Identities=13% Similarity=0.067 Sum_probs=186.0
Q ss_pred EEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCC---------
Q psy11350 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD--------- 229 (471)
Q Consensus 159 ~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~--------- 229 (471)
.+.+++.+|++|+.||.|++||+.+++.+..+. ...|.++.|+|. +++++.|++|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~--------~~s~s~D~~i~~w~~~~~~~~~~~~ 112 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA--------IISRGPCNRLLLLYPGNQITILDSK 112 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS--------EEEECSTTEEEEEETTTEEEEEETT
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc--------eEEecCCCeEEEEEccCceEEeecC
Confidence 445688999999999999999999999888876 456777778775 8999999999999665
Q ss_pred CCcceeeecCCCCcceEEEEECC--CCCEEEEEeCCCeEEecccc-----ccccCCCCcceEEEEECCCCCEEEEEecCC
Q psy11350 230 KDTPLANLEGHEPFRVSRIKFHP--SGRFLGTCCWDHSWRLDTPL-----ANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 302 (471)
Q Consensus 230 ~~~~~~~~~~~~~~~v~~~~~s~--~~~~i~~~~~d~~~~~~~~~-----~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg 302 (471)
+++.+..+.......|.+++|+| +++++++++.|+.+.++... .....+....+.+++|+|++.+|++|+.||
T Consensus 113 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg 192 (343)
T 3lrv_A 113 TNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG 192 (343)
T ss_dssp TCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS
T ss_pred CcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC
Confidence 45545555533334899999999 99999999999997775432 222344455799999999999999999999
Q ss_pred eEEEEECCCCcEE-EEeeC-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecc---cCcCEE--EEEEcCC
Q psy11350 303 SWRLWDLNQGQEV-LHQEG-HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG---HLKSVF--SVDFSPD 375 (471)
Q Consensus 303 ~i~iwd~~~~~~~-~~~~~-~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~---h~~~v~--~~~~sp~ 375 (471)
.|++||+++++.+ ..+.. |..+|++++|+|++.+|++++ ++.|++||+++++.+..+.. |...+. +++|+|+
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 193 ILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp CEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT
T ss_pred EEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCC
Confidence 9999999999887 77887 999999999999999999999 55999999999877655543 434444 6999999
Q ss_pred CCEEEEEeC-CCcEEEEECCCccc
Q psy11350 376 GYHLATGSE-DNAVKIWDLRKRRL 398 (471)
Q Consensus 376 ~~~l~s~s~-dg~i~iwd~~~~~~ 398 (471)
|++|++++. |+.|++|++.+...
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTC
T ss_pred CCEEEEecCCCCcEEEEEEccccc
Confidence 999999998 99999999976543
No 107
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.98 E-value=2.7e-31 Score=249.76 Aligned_cols=201 Identities=22% Similarity=0.324 Sum_probs=168.5
Q ss_pred EeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc--ceeeecCCCCcceEEEEECC--CCCEEEEEeCCC
Q psy11350 189 TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT--PLANLEGHEPFRVSRIKFHP--SGRFLGTCCWDH 264 (471)
Q Consensus 189 ~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~s~--~~~~i~~~~~d~ 264 (471)
.+.+|...|++++|+|++. +|++|+.|++|+|||+.++. .+..+.+|.. .|.+++|++ ++.+|++++.|+
T Consensus 8 ~~~~H~~~V~~v~~s~~g~-----~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~-~V~~v~~~~~~~~~~l~s~s~D~ 81 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGT-----RLATCSSDRSVKIFDVRNGGQILIADLRGHEG-PVWQVAWAHPMYGNILASCSYDR 81 (316)
T ss_dssp ------CCEEEEEECGGGC-----EEEEEETTTEEEEEEEETTEEEEEEEEECCSS-CEEEEEECCGGGSSCEEEEETTS
T ss_pred ecccccCeEEEeeEcCCCC-----EEEEEeCCCeEEEEEecCCCcEEEEEEcCCCc-cEEEEEeCCCCCCCEEEEEECCC
Confidence 4568999999999999998 79999999999999998764 4567888876 899999986 489999999999
Q ss_pred eEEecccc-------ccccCCCCcceEEEEECCC--CCEEEEEecCCeEEEEECCCCcE---EEEeeCCCCCeEEEEEeC
Q psy11350 265 SWRLDTPL-------ANLEGHEPFRVSRIKFHPS--GRFLGTCCWDHSWRLWDLNQGQE---VLHQEGHGKPVYCMSFQG 332 (471)
Q Consensus 265 ~~~~~~~~-------~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~s~ 332 (471)
.+++|... ..+.+| ...|.+++|+|+ +.+|++++.|++|++||++.+.. ...+.+|...|.+++|+|
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h-~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 160 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGH-DSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP 160 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCC-SSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECC
T ss_pred EEEEEECCCCcceEEEEccCC-CCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcc
Confidence 98876542 233455 568999999997 78999999999999999987632 344568999999999999
Q ss_pred C-----------------CCEEEEEeCCCeEEEEeCCCC---eeEEEecccCcCEEEEEEcCCC----CEEEEEeCCCcE
Q psy11350 333 D-----------------GSVVATGGLDAFGRVWDLRTG---RCIMFLEGHLKSVFSVDFSPDG----YHLATGSEDNAV 388 (471)
Q Consensus 333 d-----------------~~~l~t~~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~sp~~----~~l~s~s~dg~i 388 (471)
+ +.+|++|+.|+.|++||++.+ +++..+.+|...|.+++|+|++ .+|++|+.||+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v 240 (316)
T 3bg1_A 161 AVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240 (316)
T ss_dssp CCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEE
T ss_pred ccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeE
Confidence 7 478999999999999999765 4677889999999999999986 899999999999
Q ss_pred EEEECCCc
Q psy11350 389 KIWDLRKR 396 (471)
Q Consensus 389 ~iwd~~~~ 396 (471)
++||+.+.
T Consensus 241 ~iw~~~~~ 248 (316)
T 3bg1_A 241 FIWTCDDA 248 (316)
T ss_dssp EEEECSST
T ss_pred EEEEccCc
Confidence 99999763
No 108
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.5e-30 Score=247.65 Aligned_cols=207 Identities=22% Similarity=0.369 Sum_probs=178.4
Q ss_pred CceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCC--CCcceeeecCCCCcceEEEEECCC--CCEEEE
Q psy11350 184 CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD--KDTPLANLEGHEPFRVSRIKFHPS--GRFLGT 259 (471)
Q Consensus 184 ~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~v~~~~~s~~--~~~i~~ 259 (471)
|+++..+.+|...|++++|+|++. +|++|+.||.|++||+. ++..+..+..|.. .|.+++|+++ +.++++
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~-----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s 74 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGK-----RLATCSSDKTIKIFEVEGETHKLIDTLTGHEG-PVWRVDWAHPKFGTILAS 74 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSS-----EEEEEETTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEECCGGGCSEEEE
T ss_pred CCccEEecCCcccEEEEEEcCCCC-----EEEEEECCCcEEEEecCCCcceeeeEecCCCC-cEEEEEeCCCCCCCEEEE
Confidence 356677889999999999999998 79999999999999997 5566777887776 8999999988 999999
Q ss_pred EeCCCeEEeccc-------cccccCCCCcceEEEEECCC--CCEEEEEecCCeEEEEECCCCc--EEEEeeCCCCCeEEE
Q psy11350 260 CCWDHSWRLDTP-------LANLEGHEPFRVSRIKFHPS--GRFLGTCCWDHSWRLWDLNQGQ--EVLHQEGHGKPVYCM 328 (471)
Q Consensus 260 ~~~d~~~~~~~~-------~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~ 328 (471)
++.|+.+.+|.. ...+..| ...|.+++|+|+ +.+|++++.||.|++||++++. ....+.+|...|.++
T Consensus 75 ~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~ 153 (379)
T 3jrp_A 75 CSYDGKVLIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 153 (379)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEE
T ss_pred eccCCEEEEEEcCCCceeEeeeecCC-CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEE
Confidence 999999766532 2334445 568999999999 9999999999999999998873 455677899999999
Q ss_pred EEeC-------------CCCEEEEEeCCCeEEEEeCCCCe----eEEEecccCcCEEEEEEcCC---CCEEEEEeCCCcE
Q psy11350 329 SFQG-------------DGSVVATGGLDAFGRVWDLRTGR----CIMFLEGHLKSVFSVDFSPD---GYHLATGSEDNAV 388 (471)
Q Consensus 329 ~~s~-------------d~~~l~t~~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~~~~sp~---~~~l~s~s~dg~i 388 (471)
+|+| ++.+|++|+.||.|++||++++. .+..+.+|...|.+++|+|+ +.+|++++.||.|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i 233 (379)
T 3jrp_A 154 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 233 (379)
T ss_dssp EECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred EEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEE
Confidence 9999 69999999999999999998764 55678889999999999999 8999999999999
Q ss_pred EEEECCCcc
Q psy11350 389 KIWDLRKRR 397 (471)
Q Consensus 389 ~iwd~~~~~ 397 (471)
++||++++.
T Consensus 234 ~iwd~~~~~ 242 (379)
T 3jrp_A 234 IIWTQDNEQ 242 (379)
T ss_dssp EEEEESSTT
T ss_pred EEEeCCCCC
Confidence 999998865
No 109
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=3.9e-30 Score=246.18 Aligned_cols=240 Identities=18% Similarity=0.173 Sum_probs=200.5
Q ss_pred eeeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEE--eeCCCCCCccEEEEEeCCCc
Q psy11350 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEF--HPLPSEGAVCSLASCAQDGS 222 (471)
Q Consensus 145 ~~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~~~~~l~s~~~dg~ 222 (471)
...+.+|..+|++++|+|++++|++|+.||.|++||+.+++.+. +..|...|.+++| +|++. +|++++.||.
T Consensus 79 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~-----~l~~~~~dg~ 152 (368)
T 3mmy_A 79 PKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYS-----CVMTGSWDKT 152 (368)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCE-----EEEEEETTSE
T ss_pred EEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCC-----EEEEccCCCc
Confidence 35677899999999999999999999999999999999988766 5679999999999 67766 7999999999
Q ss_pred EEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc------ccccCCCCcceEEEEECCCCCE--
Q psy11350 223 VKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL------ANLEGHEPFRVSRIKFHPSGRF-- 294 (471)
Q Consensus 223 i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~------~~~~~~~~~~v~~l~~~~~~~~-- 294 (471)
|++||+.+++.+..+..+. .+.++.+.+ ..+++++.++.+.++... ..........+.++.+.++...
T Consensus 153 i~vwd~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (368)
T 3mmy_A 153 LKFWDTRSSNPMMVLQLPE--RCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKP 228 (368)
T ss_dssp EEEECSSCSSCSEEEECSS--CEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCE
T ss_pred EEEEECCCCcEEEEEecCC--CceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCC
Confidence 9999999999988888765 566666654 578888888886664322 1222222345667776665554
Q ss_pred --EEEEecCCeEEEEECCCC---cEEEEeeCCCC------------CeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeE
Q psy11350 295 --LGTCCWDHSWRLWDLNQG---QEVLHQEGHGK------------PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI 357 (471)
Q Consensus 295 --l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~------------~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~ 357 (471)
+++++.||.|++||++.. ..+..+.+|.. +|++++|+|++++|++|+.||.|++||+.+++++
T Consensus 229 ~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 229 TGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred CeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 999999999999999987 55677777765 7999999999999999999999999999999999
Q ss_pred EEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11350 358 MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 358 ~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~ 394 (471)
..+.+|...|.+++|+|+|++|++|+.|+..+.|++-
T Consensus 309 ~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 309 KTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp EECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred EEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 9999999999999999999999999999866555544
No 110
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=2.1e-30 Score=238.06 Aligned_cols=209 Identities=13% Similarity=0.110 Sum_probs=160.8
Q ss_pred CcCeEEEEEecC----CCEEEEEeC--------------------CCcEEEEeC-CCCceEEEeecCCCCEEEEEEee--
Q psy11350 152 TRPISYCSFSPD----SQHVATASW--------------------SGLCKLWTV-PECELVQTFRGHDCNVGAIEFHP-- 204 (471)
Q Consensus 152 ~~~V~~~~~s~~----~~~l~tg~~--------------------dg~i~iwd~-~~~~~~~~~~~h~~~v~~l~~~~-- 204 (471)
.+.|.+++|+|| ++++++++. |+.|++|++ ++|+.+..+.+|...+..++|+|
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ 190 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccC
Confidence 346778888888 778887653 788888888 55888888888888888888888
Q ss_pred -CCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCC--cceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCc
Q psy11350 205 -LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP--FRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPF 281 (471)
Q Consensus 205 -~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~ 281 (471)
++. +|++++.|++|+|||+.+++++.++.++.. ..+.+++|+|+|.++++++.+..
T Consensus 191 g~~~-----~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~---------------- 249 (356)
T 2w18_A 191 GMQE-----ALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA---------------- 249 (356)
T ss_dssp TSTT-----EEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC--------------------
T ss_pred CCCc-----eEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC----------------
Confidence 445 799999999999999999999999976542 35777788888887776653210
Q ss_pred ceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEe-----eCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCee
Q psy11350 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-----EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356 (471)
Q Consensus 282 ~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~ 356 (471)
...+++|+.|++|++||..+++.+..+ .+|...+.+..++ +.++++|+.|++|+|||+.++++
T Consensus 250 ----------~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~ 317 (356)
T 2w18_A 250 ----------KESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQC 317 (356)
T ss_dssp ------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSE
T ss_pred ----------cceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcE
Confidence 124789999999999999999887655 3676666555554 78999999999999999999999
Q ss_pred EEEecccCcCEE-EEEEcCCCCEEEEEeCCCcEEEEEC
Q psy11350 357 IMFLEGHLKSVF-SVDFSPDGYHLATGSEDNAVKIWDL 393 (471)
Q Consensus 357 ~~~~~~h~~~v~-~~~~sp~~~~l~s~s~dg~i~iwd~ 393 (471)
+.++.+|...+. +++|+|||++|++|+.|++|+|||+
T Consensus 318 l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 318 TALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999999987665 5899999999999999999999996
No 111
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=4.7e-30 Score=252.89 Aligned_cols=243 Identities=23% Similarity=0.358 Sum_probs=196.3
Q ss_pred cceeeeeecCC------------cCeEEEEEecCC--CEEEEEeCCCcEEEEeCCCCceE--------------------
Q psy11350 142 LSIYCSQVGDT------------RPISYCSFSPDS--QHVATASWSGLCKLWTVPECELV-------------------- 187 (471)
Q Consensus 142 ~~~~~~~~gh~------------~~V~~~~~s~~~--~~l~tg~~dg~i~iwd~~~~~~~-------------------- 187 (471)
+.....+.+|. .+|++++|+|++ .+|++++.||.|++||+.++...
T Consensus 71 ~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 150 (447)
T 3dw8_B 71 YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVT 150 (447)
T ss_dssp EEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCC
T ss_pred eeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCccccc
Confidence 33566778998 899999999998 79999999999999998764432
Q ss_pred -------------------EE-eecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC-Ccceee-------ecC
Q psy11350 188 -------------------QT-FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK-DTPLAN-------LEG 239 (471)
Q Consensus 188 -------------------~~-~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~-------~~~ 239 (471)
.. ..+|...|.+++|+|++. +|++| .||.|++||+.+ +..+.. +..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-----~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 224 (447)
T 3dw8_B 151 TLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYE-----TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEE 224 (447)
T ss_dssp SCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSS-----EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGG
T ss_pred ceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCC-----EEEEe-CCCeEEEEECCCCCceeeeeecccccccc
Confidence 12 357999999999999987 78888 799999999984 444432 344
Q ss_pred CCCcceEEEEECCCC-CEEEEEeCCCeEEeccc---------cccccCCCC-----------cceEEEEECCCCCEEEEE
Q psy11350 240 HEPFRVSRIKFHPSG-RFLGTCCWDHSWRLDTP---------LANLEGHEP-----------FRVSRIKFHPSGRFLGTC 298 (471)
Q Consensus 240 ~~~~~v~~~~~s~~~-~~i~~~~~d~~~~~~~~---------~~~~~~~~~-----------~~v~~l~~~~~~~~l~~~ 298 (471)
|.. .|.+++|+|++ .++++++.|+.+.++.. ...+..+.. ..|.+++|+|++++|+++
T Consensus 225 ~~~-~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 225 LTE-VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp CCC-CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred cCc-ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEe
Confidence 544 89999999999 99999999999777542 233444432 279999999999999999
Q ss_pred ecCCeEEEEECCC-CcEEEEeeCCCCC---------------eEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecc
Q psy11350 299 CWDHSWRLWDLNQ-GQEVLHQEGHGKP---------------VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362 (471)
Q Consensus 299 ~~dg~i~iwd~~~-~~~~~~~~~~~~~---------------v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~ 362 (471)
+. +.|++||+++ ++++..+.+|... +..++|+|++.+|++|+.||.|++||+.+++.+. +.+
T Consensus 304 ~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~ 381 (447)
T 3dw8_B 304 DY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEA 381 (447)
T ss_dssp ES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EEC
T ss_pred eC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eee
Confidence 98 9999999997 8888888887532 3349999999999999999999999999987653 222
Q ss_pred ---------------------------------cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11350 363 ---------------------------------HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 363 ---------------------------------h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~ 394 (471)
+...|..++|+|++.+|++++.++ +++|.-+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 382 SRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred cccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 345688999999999999998775 7788654
No 112
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=2.1e-28 Score=236.91 Aligned_cols=246 Identities=11% Similarity=0.060 Sum_probs=202.7
Q ss_pred eeecCCcCeEEEEEecCCCEE-EEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEE
Q psy11350 147 SQVGDTRPISYCSFSPDSQHV-ATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL 225 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~~~~l-~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 225 (471)
.+.+| ..+.+++|+|+|++| ++++.++.|++||+.+++.+..+..+. .+.+++|+|++.. ++++++.++.|++
T Consensus 27 ~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~----l~~~~~~~~~v~v 100 (391)
T 1l0q_A 27 TIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQ----VYVTNMASSTLSV 100 (391)
T ss_dssp EEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSE----EEEEETTTTEEEE
T ss_pred EeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCE----EEEEECCCCEEEE
Confidence 34455 458999999999987 567689999999999999998887665 8999999999983 3355667799999
Q ss_pred EeCCCCcceeeecCCCCcceEEEEECCCCCEE-EEEeCCCeEEeccc-----cccccCCCCcceEEEEECCCCCEE-EEE
Q psy11350 226 WSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL-GTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFL-GTC 298 (471)
Q Consensus 226 wd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i-~~~~~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l-~~~ 298 (471)
||+.+++.+..+..+. .+.+++|+|+++++ ++++.++.+.++.. ...+..+ ..+.+++|+|++++| +++
T Consensus 101 ~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~ 176 (391)
T 1l0q_A 101 IDTTSNTVAGTVKTGK--SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVAN 176 (391)
T ss_dssp EETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEE
T ss_pred EECCCCeEEEEEeCCC--CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEEEEEe
Confidence 9999998888877654 68999999999987 67777888666542 2222222 357999999999987 567
Q ss_pred ecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEe---CCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCC
Q psy11350 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG---LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD 375 (471)
Q Consensus 299 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~---~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 375 (471)
+.++.|++||+++++.+..+. +...+.+++|+|++++|++++ .++.|++||+.+++.+..+..|. .+.+++|+|+
T Consensus 177 ~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~d 254 (391)
T 1l0q_A 177 FDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPD 254 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTT
T ss_pred CCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccC
Confidence 788999999999998777665 456789999999999999888 68999999999999988888764 5899999999
Q ss_pred CCEE-EEEeCCCcEEEEECCCccchheecc
Q psy11350 376 GYHL-ATGSEDNAVKIWDLRKRRLLKWCTQ 404 (471)
Q Consensus 376 ~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~ 404 (471)
+++| ++++.|+.|++||+.+++++..+..
T Consensus 255 g~~l~~s~~~d~~v~v~d~~~~~~~~~~~~ 284 (391)
T 1l0q_A 255 GKKVYVALSFXNTVSVIDTATNTITATMAV 284 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEEEEEC
Confidence 9877 6778899999999999988877653
No 113
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=1.3e-29 Score=243.04 Aligned_cols=197 Identities=12% Similarity=0.077 Sum_probs=162.6
Q ss_pred cCCcCeEEEEEecCCCEEEEEe--CCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe
Q psy11350 150 GDTRPISYCSFSPDSQHVATAS--WSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 227 (471)
.+...+.+++|||||++|++++ .|++|+|||+.+++.+..+. |...|.+++|+|++. ++++++. +.+.+|+
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~-----~l~s~s~-~~~~~~~ 203 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGK-----VVAYITG-SSLEVIS 203 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSS-----EEEEECS-SCEEEEE
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCc-----eEEeccc-eeEEEEE
Confidence 4556799999999999987654 78999999999999998886 778899999999998 6888775 5567777
Q ss_pred CCCCcceeee-cCCCCcceEEEEECCCCCEEEEEeCCCe-------EEeccc------cccccCCCCcceEEEEECCCCC
Q psy11350 228 LDKDTPLANL-EGHEPFRVSRIKFHPSGRFLGTCCWDHS-------WRLDTP------LANLEGHEPFRVSRIKFHPSGR 293 (471)
Q Consensus 228 ~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~i~~~~~d~~-------~~~~~~------~~~~~~~~~~~v~~l~~~~~~~ 293 (471)
..++..+... .......+.+++|+|++.++++++.++. |.+... ...+.+| ...|++++|+|+|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~Spdg~ 282 (365)
T 4h5i_A 204 TVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNR-FKGITSMDVDMKGE 282 (365)
T ss_dssp TTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESS-CSCEEEEEECTTSC
T ss_pred eccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCC-CCCeEeEEECCCCC
Confidence 7677665433 3333448999999999999999998873 222211 2234455 55799999999999
Q ss_pred EEEEEecCCeEEEEECCCCcEEEEe-eCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCC
Q psy11350 294 FLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354 (471)
Q Consensus 294 ~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~ 354 (471)
+||+|+.|++|+|||+++++++..+ .+|..+|++++|+|||++|++|+.|++|+|||+...
T Consensus 283 ~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 283 LAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred ceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999999999999999998875 789999999999999999999999999999999643
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=2.2e-30 Score=251.15 Aligned_cols=237 Identities=14% Similarity=0.117 Sum_probs=171.4
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEE-----EeecCCCCEEEEEEee--------CCCCCCccEEEE
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ-----TFRGHDCNVGAIEFHP--------LPSEGAVCSLAS 216 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~-----~~~~h~~~v~~l~~~~--------~~~~~~~~~l~s 216 (471)
+|...+....+++++.+|++|+.|++|+|||+.++.... .+.+|.+.|++++|+| ++. +|++
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-----~las 161 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-----VIAS 161 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-----EEEE
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC-----EEEE
Confidence 455555666667778899999999999999998876543 3578999999999998 444 7999
Q ss_pred EeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCC-EEEEEeCCCeEEecccccc---------------------
Q psy11350 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLDTPLAN--------------------- 274 (471)
Q Consensus 217 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~i~~~~~d~~~~~~~~~~~--------------------- 274 (471)
|+.|++|+|||+.++.++..+..+.. .+.+++|+|++. ++++++.|+.+++|.....
T Consensus 162 ~s~D~tv~~Wd~~~~~~~~~~~~~~~-~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 162 VGDDCTLIIWRLTDEGPILAGYPLSS-PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp EETTSEEEEEEEETTEEEEEEEECSS-CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred EECCCeEEEEECCCCceeeeecCCCC-CcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecc
Confidence 99999999999988887777776665 899999999875 7999999999777532110
Q ss_pred ---------ccCCCCcceEEEEEC-CCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEE---------------
Q psy11350 275 ---------LEGHEPFRVSRIKFH-PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS--------------- 329 (471)
Q Consensus 275 ---------~~~~~~~~v~~l~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~--------------- 329 (471)
..+| ...+.++.|+ |+++.|++++.|+++++||+..++....+..|...+..+.
T Consensus 241 ~~~~~~~~~~~~~-~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (393)
T 4gq1_A 241 TLPLVNTCHSSGI-ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLL 319 (393)
T ss_dssp SGGGC------CC-SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSS
T ss_pred cccceeeeecccc-cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcce
Confidence 1122 3467888886 7999999999999999999998776666655554444333
Q ss_pred ---EeC--CCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11350 330 ---FQG--DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 330 ---~s~--d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~ 394 (471)
|+| ++.++++|+.||.|++||+.+++++..+.+|..+|.+++|+|||++||+++.+| +.+|.+.
T Consensus 320 ~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 320 GACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp CCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred eEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 333 344677888999999999999998888888999999999999999999998776 5566543
No 115
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=5.3e-29 Score=244.43 Aligned_cols=239 Identities=22% Similarity=0.367 Sum_probs=196.7
Q ss_pred cCeEEEEEecCC----------CEEEEEeC----CCcEEEEeCC--------------------------CCce-EEEee
Q psy11350 153 RPISYCSFSPDS----------QHVATASW----SGLCKLWTVP--------------------------ECEL-VQTFR 191 (471)
Q Consensus 153 ~~V~~~~~s~~~----------~~l~tg~~----dg~i~iwd~~--------------------------~~~~-~~~~~ 191 (471)
-|..++.|.|+. .+|++|+. ...|.++++. +++. .....
T Consensus 46 wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 125 (430)
T 2xyi_A 46 WPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKI 125 (430)
T ss_dssp SCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEE
T ss_pred CCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEE
Confidence 467888999875 46777764 3467777532 1122 23445
Q ss_pred cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC----------CcceeeecCCCCcceEEEEECCCCC-EEEEE
Q psy11350 192 GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK----------DTPLANLEGHEPFRVSRIKFHPSGR-FLGTC 260 (471)
Q Consensus 192 ~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~~~v~~~~~s~~~~-~i~~~ 260 (471)
.|.+.|++++|+|.+.. +|++++.||.|++|++.+ ...+..+..|.. .+.+++|+|++. +|+++
T Consensus 126 ~h~~~v~~l~~~p~~~~----~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNAC----VIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK-EGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EESSCCSEEEEETTEEE----EEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS-CCCCEEECTTSTTEEEEE
T ss_pred cCCCcEEEEEECCCCCc----EEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCC-CeEEEEeCCCCCCeEEEE
Confidence 79999999999997432 799999999999999976 567777777776 899999999998 99999
Q ss_pred eCCCeEEecccc------------ccccCCCCcceEEEEECC-CCCEEEEEecCCeEEEEECCCC---cEEEEeeCCCCC
Q psy11350 261 CWDHSWRLDTPL------------ANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLWDLNQG---QEVLHQEGHGKP 324 (471)
Q Consensus 261 ~~d~~~~~~~~~------------~~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~ 324 (471)
+.||.+.++... ..+..| ...|.+++|+| ++.+|++++.||.|++||++++ +.+..+..|...
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGH-TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCC-SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCC-CCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 999997775432 223345 56799999999 7789999999999999999987 567778899999
Q ss_pred eEEEEEeCCCC-EEEEEeCCCeEEEEeCCC-CeeEEEecccCcCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCcc
Q psy11350 325 VYCMSFQGDGS-VVATGGLDAFGRVWDLRT-GRCIMFLEGHLKSVFSVDFSPDGY-HLATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 325 v~~~~~s~d~~-~l~t~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~i~iwd~~~~~ 397 (471)
|++++|+|++. +|++|+.||.|++||+++ ..++..+.+|...|++++|+|++. +|++++.||.|+|||+....
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 99999999887 789999999999999998 567888999999999999999884 79999999999999998743
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=3.9e-29 Score=236.98 Aligned_cols=206 Identities=22% Similarity=0.339 Sum_probs=174.6
Q ss_pred EEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc----ceeeecCCCCcceEEEEECC--CCCEEEEEe
Q psy11350 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT----PLANLEGHEPFRVSRIKFHP--SGRFLGTCC 261 (471)
Q Consensus 188 ~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~v~~~~~s~--~~~~i~~~~ 261 (471)
..+.+|...|++++|+|++. +|++|+.||.|++||+.++. ....+..|.. .|.+++|+| ++.+|++++
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~-----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGR-----HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDS-SIVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp CEECCCSSCEEEEEECSSSS-----EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSS-CEEEEEECCGGGCSEEEEEE
T ss_pred ccCcccccceeEEEEcCCCC-----EEEEeeCCCeEEEEECCCCCCcceecceeccCCC-cEEEEEEcCCCCCCEEEEEc
Confidence 34678999999999999988 79999999999999998763 4555666766 899999999 699999999
Q ss_pred CCCeEEeccc--------------cccccCCCCcceEEEEECCC--CCEEEEEecCCeEEEEECCCCcEEEEe-------
Q psy11350 262 WDHSWRLDTP--------------LANLEGHEPFRVSRIKFHPS--GRFLGTCCWDHSWRLWDLNQGQEVLHQ------- 318 (471)
Q Consensus 262 ~d~~~~~~~~--------------~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~------- 318 (471)
.|+.+.+|.. ...+..| ...|.+++|+|+ +.+|++++.||.|++||+++++.+..+
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 157 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDS-KGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK 157 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE
T ss_pred CCCeEEEEecCCCcccccccCcceeeeeccc-CCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc
Confidence 9998766533 3344555 568999999999 999999999999999999887654332
Q ss_pred ------eCCCCCeEEEEEeCC---CCEEEEEeCCCeEEEEeCCCCee--EEEecccCcCEEEEEEcCCC----CEEEEEe
Q psy11350 319 ------EGHGKPVYCMSFQGD---GSVVATGGLDAFGRVWDLRTGRC--IMFLEGHLKSVFSVDFSPDG----YHLATGS 383 (471)
Q Consensus 319 ------~~~~~~v~~~~~s~d---~~~l~t~~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~sp~~----~~l~s~s 383 (471)
..|...+.+++|+|+ +.++++++.++.+.+|+...++. +..+.+|...|++++|+|++ .+|++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 158 VLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp SCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE
T ss_pred ccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc
Confidence 267889999999997 89999999999998888877764 77888999999999999998 8999999
Q ss_pred CCCcEEEEECCCccchh
Q psy11350 384 EDNAVKIWDLRKRRLLK 400 (471)
Q Consensus 384 ~dg~i~iwd~~~~~~~~ 400 (471)
.||.|++||++.+....
T Consensus 238 ~dg~i~iwd~~~~~~~~ 254 (351)
T 3f3f_A 238 KDGRIRIFKITEKLSPL 254 (351)
T ss_dssp TTSCEEEEEEEECC---
T ss_pred CCCeEEEEeCCCCcCcc
Confidence 99999999998875544
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-28 Score=243.61 Aligned_cols=238 Identities=14% Similarity=0.085 Sum_probs=199.5
Q ss_pred ecCCcCeEEEEEecCCCEE-EEEeCCCcEEEEeCC--CCceEEEee--cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcE
Q psy11350 149 VGDTRPISYCSFSPDSQHV-ATASWSGLCKLWTVP--ECELVQTFR--GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~~l-~tg~~dg~i~iwd~~--~~~~~~~~~--~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 223 (471)
.+|...|++++|+|++++| ++|+.||.|+|||+. +++.+..+. .|...|.+++|+|++. +|++++.+|.|
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-----~l~~~~~~g~v 173 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT-----TVIIADKFGDV 173 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS-----EEEEEETTSEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC-----EEEEEeCCCcE
Confidence 4789999999999999996 899999999999999 888888876 6778999999999998 79999999999
Q ss_pred EEEeCCCCccee----eecCCCCcceEEEEECCC---CCEEEEEeCCCeEEeccc-----ccc-ccCCCCcceEEEEECC
Q psy11350 224 KLWSLDKDTPLA----NLEGHEPFRVSRIKFHPS---GRFLGTCCWDHSWRLDTP-----LAN-LEGHEPFRVSRIKFHP 290 (471)
Q Consensus 224 ~iwd~~~~~~~~----~~~~~~~~~v~~~~~s~~---~~~i~~~~~d~~~~~~~~-----~~~-~~~~~~~~v~~l~~~~ 290 (471)
.+|++.++.... .+.+|.. .|.+++|+|+ +++|++++.|+.+.+|.. ... +.+| ...|.+++|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~s- 250 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQEPILGHVS-MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH-KHFVSSICCG- 250 (450)
T ss_dssp EEEETTSCCCSSCCCCCSEECSS-CEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC-SSCEEEEEEC-
T ss_pred EEEecCCcccccccceeeecccC-ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC-CCceEEEEEC-
Confidence 999998876554 5566655 8999999999 999999999999776543 222 3345 6689999999
Q ss_pred CCCEEEEEecCCeEEEEECCCCcEEEEeeC-------------------------CCCCeEEEEEeCCCCEEEEEe-CCC
Q psy11350 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQEG-------------------------HGKPVYCMSFQGDGSVVATGG-LDA 344 (471)
Q Consensus 291 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------------------------~~~~v~~~~~s~d~~~l~t~~-~dg 344 (471)
++++|++++.|++|++||+.+++++..+.. +...|.+++|+|++++|++++ .++
T Consensus 251 d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~ 330 (450)
T 2vdu_B 251 KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATK 330 (450)
T ss_dssp STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCS
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCC
Confidence 999999999999999999999998877752 345799999999999999998 899
Q ss_pred eEEEEeC--CCC---eeEEEecccCcCEEEEEEcCCCCEEEEEeC------CCcEEEEECCC
Q psy11350 345 FGRVWDL--RTG---RCIMFLEGHLKSVFSVDFSPDGYHLATGSE------DNAVKIWDLRK 395 (471)
Q Consensus 345 ~i~iwd~--~~~---~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~------dg~i~iwd~~~ 395 (471)
.|+||++ .++ +.+..+.+| +.|.+++|+|++.++++++. +..|.+|.++.
T Consensus 331 ~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 331 CIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp EEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred eEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 9999999 666 777788888 89999999996443333332 55688887653
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=3.5e-28 Score=238.55 Aligned_cols=240 Identities=10% Similarity=0.032 Sum_probs=199.4
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEE-----EeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ-----TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~-----~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 227 (471)
..+.+++|+|++.++++++.++.|++||+.+++... .+.+|...|.+++|+|++. ++++++.|+.|++||
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~~~s~~~d~~v~~~d 197 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNE-----LWVSQMQANAVHVFD 197 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTE-----EEEEEGGGTEEEEEE
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCE-----EEEEECCCCEEEEEE
Confidence 456699999977788888889999999999998887 4457889999999999887 799999999999999
Q ss_pred CCCCcceeeecCCCCcceEEEEECCCCCEEEEEe-CCCeEEeccc-----cccccCCCCcceEEEEECCCCCEEEEEe--
Q psy11350 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLGTCC-- 299 (471)
Q Consensus 228 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~-~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~~~~-- 299 (471)
+.+++.+..+..+.. .+.+++|+|+++++++++ .++.+.++.. ...+.. ...+.+++|+|++++|++++
T Consensus 198 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 198 LKTLAYKATVDLTGK-WSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp TTTCCEEEEEECSSS-SEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEE
T ss_pred CCCceEEEEEcCCCC-CeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECC
Confidence 999998888876655 899999999999886555 7888666442 122222 34589999999999999988
Q ss_pred ------cCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCE-EEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEE
Q psy11350 300 ------WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372 (471)
Q Consensus 300 ------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~-l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 372 (471)
.||.|++||+.+++.+..+ .|...+.+++|+|+++. +++++.++.|++||+.+++.+..+. +...+.+++|
T Consensus 275 ~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~ 352 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIAL 352 (433)
T ss_dssp SCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEE
T ss_pred CCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEE
Confidence 4889999999998776655 45568899999999975 5666899999999999998888776 6788999999
Q ss_pred cCCCCEEEEEeC---------------CCcEEEEECCCccchhee
Q psy11350 373 SPDGYHLATGSE---------------DNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 373 sp~~~~l~s~s~---------------dg~i~iwd~~~~~~~~~~ 402 (471)
+|+|++|++++. ||.|++||+.+++.+..+
T Consensus 353 s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 353 SPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp CTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred cCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 999999988876 579999999988766544
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=2.9e-27 Score=217.21 Aligned_cols=227 Identities=15% Similarity=0.093 Sum_probs=171.0
Q ss_pred eEEEEEecCCC---EEEEEeCCCcEEEEeCCCC---ceEEEeecCCCCEEEEEEeeCCCCC-------------------
Q psy11350 155 ISYCSFSPDSQ---HVATASWSGLCKLWTVPEC---ELVQTFRGHDCNVGAIEFHPLPSEG------------------- 209 (471)
Q Consensus 155 V~~~~~s~~~~---~l~tg~~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~------------------- 209 (471)
+.++-|-.-|- .+++++ ...|++|+..++ +.++++..|..+|..|.+.|+..+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 45565654443 577888 789999999998 8888888888766666665532210
Q ss_pred -----CccEEEEEeCCCcEEEEeCCCCcceee-ecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcce
Q psy11350 210 -----AVCSLASCAQDGSVKLWSLDKDTPLAN-LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRV 283 (471)
Q Consensus 210 -----~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v 283 (471)
....+++++. .+.+|++.+++.+.. ..+|.. .|..++++|+|+.+... ..| ...+
T Consensus 121 pd~~~~~~~l~s~g~--~~~v~~l~~g~lv~ss~~g~d~-~V~~~~~s~dG~~~~s~---------------~~~-~~~v 181 (356)
T 2w18_A 121 SDDESEKQVLLKSGN--IKAVLGLTKRRLVSSSGTLSDQ-QVEVMTFAEDGGGKENQ---------------FLM-PPEE 181 (356)
T ss_dssp -----CCEEEEEEEE--EEEEEEETTTEEEEEESSSTTC-EEEEEEECTTSCEEEEE---------------EEC-CCSS
T ss_pred CCccccccEEEeCCC--eEEEEecCCCcEEEecccCCCC-cEEEEEECCCCceeeee---------------ccC-CCce
Confidence 0114666553 488899988887777 455555 89999999999877642 233 3367
Q ss_pred EEEEECC---CCCEEEEEecCCeEEEEECCCCcEEEEeeCCC---CCeEEEEEeCCCCEE------------EEEeCCCe
Q psy11350 284 SRIKFHP---SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG---KPVYCMSFQGDGSVV------------ATGGLDAF 345 (471)
Q Consensus 284 ~~l~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---~~v~~~~~s~d~~~l------------~t~~~dg~ 345 (471)
+.++|+| ++.+|++++.|++|+|||+.+++++.++.+|. ..+.+++|+|+|.++ ++|+.|++
T Consensus 182 ~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t 261 (356)
T 2w18_A 182 TILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ 261 (356)
T ss_dssp CEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE
T ss_pred eeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE
Confidence 8888988 77999999999999999999999999998754 367788999999876 56788999
Q ss_pred EEEEeCCCCeeEEEe-----cccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 346 GRVWDLRTGRCIMFL-----EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 346 i~iwd~~~~~~~~~~-----~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
|++||..+++.+..+ .+|...+.+..++ +.++++|+.|++|+|||+.+++++.++.
T Consensus 262 IklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~ 322 (356)
T 2w18_A 262 LIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLP 322 (356)
T ss_dssp EEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred EEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEec
Confidence 999999999987765 4777666655554 8899999999999999999999988765
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.8e-28 Score=255.73 Aligned_cols=204 Identities=23% Similarity=0.372 Sum_probs=175.3
Q ss_pred EEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCC--CCcceeeecCCCCcceEEEEECCC--CCEEEEEeC
Q psy11350 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD--KDTPLANLEGHEPFRVSRIKFHPS--GRFLGTCCW 262 (471)
Q Consensus 187 ~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~v~~~~~s~~--~~~i~~~~~ 262 (471)
+..+.+|.+.|++++|+|++. +|++|+.||.|++||+. ++..+..+.+|.. .|.+++|+|+ ++++++++.
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~-----~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~-~V~~l~~s~~~~~~~l~s~s~ 75 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGK-----RLATCSSDKTIKIFEVEGETHKLIDTLTGHEG-PVWRVDWAHPKFGTILASCSY 75 (753)
T ss_dssp ------CCCCEEEECCCSSSC-----CEEEEETTTEEEEEEEETTEEEEEEEECCCSS-CEEEEEECCTTSCSEEEEEET
T ss_pred eeecccCcceeEEEEECCCCC-----eEEEEECCCcEEEEecCCCCCccceeccCCcC-ceEEEEecCCCCCCEEEEEeC
Confidence 346789999999999999998 69999999999999997 4566777888876 8999999998 999999999
Q ss_pred CCeEEeccc-------cccccCCCCcceEEEEECCC--CCEEEEEecCCeEEEEECCCC--cEEEEeeCCCCCeEEEEEe
Q psy11350 263 DHSWRLDTP-------LANLEGHEPFRVSRIKFHPS--GRFLGTCCWDHSWRLWDLNQG--QEVLHQEGHGKPVYCMSFQ 331 (471)
Q Consensus 263 d~~~~~~~~-------~~~~~~~~~~~v~~l~~~~~--~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s 331 (471)
||.+.+|.. ...+..| ...|.+++|+|+ +++|++|+.||.|++||++++ .....+.+|...|.+++|+
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~ 154 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEEC
T ss_pred CCeEEEEECCCCcccccccccCC-CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEec
Confidence 999776542 2344455 668999999999 999999999999999999887 3455677899999999999
Q ss_pred C-------------CCCEEEEEeCCCeEEEEeCCCC----eeEEEecccCcCEEEEEEcCC---CCEEEEEeCCCcEEEE
Q psy11350 332 G-------------DGSVVATGGLDAFGRVWDLRTG----RCIMFLEGHLKSVFSVDFSPD---GYHLATGSEDNAVKIW 391 (471)
Q Consensus 332 ~-------------d~~~l~t~~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~sp~---~~~l~s~s~dg~i~iw 391 (471)
| ++.+|++|+.||.|++||++++ .+...+.+|...|++++|+|+ +.+|++|+.||.|++|
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iw 234 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 234 (753)
T ss_dssp CCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEE
T ss_pred CcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEe
Confidence 9 5899999999999999999887 566788899999999999999 8999999999999999
Q ss_pred ECCCcc
Q psy11350 392 DLRKRR 397 (471)
Q Consensus 392 d~~~~~ 397 (471)
|++++.
T Consensus 235 d~~~~~ 240 (753)
T 3jro_A 235 TQDNEQ 240 (753)
T ss_dssp EESSSS
T ss_pred cCCCCC
Confidence 998864
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=4e-27 Score=227.83 Aligned_cols=229 Identities=12% Similarity=0.048 Sum_probs=190.9
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcc
Q psy11350 165 QHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244 (471)
Q Consensus 165 ~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 244 (471)
.++++++.|+.|++||+.+++.+..+..|. .+.+++|+|++.. ++++++.|+.|++||+.+++.+..+..+. .
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~----l~~~~~~d~~i~v~d~~~~~~~~~~~~~~--~ 75 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTK----VYVANAHSNDVSIIDTATNNVIATVPAGS--S 75 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSE----EEEEEGGGTEEEEEETTTTEEEEEEECSS--S
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCE----EEEECCCCCeEEEEECCCCeEEEEEECCC--C
Confidence 467888899999999999999999888775 5899999999983 34677799999999999999888887766 8
Q ss_pred eEEEEECCCCCEEEEEe-CCCeEEecccc-----ccccCCCCcceEEEEECCCCCEE-EEEecCCeEEEEECCCCcEEEE
Q psy11350 245 VSRIKFHPSGRFLGTCC-WDHSWRLDTPL-----ANLEGHEPFRVSRIKFHPSGRFL-GTCCWDHSWRLWDLNQGQEVLH 317 (471)
Q Consensus 245 v~~~~~s~~~~~i~~~~-~d~~~~~~~~~-----~~~~~~~~~~v~~l~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~ 317 (471)
+.+++|+|+++++++++ .++.+.++... ..+.. ...+.+++|+|++++| ++++.++.|++||+.+++.+..
T Consensus 76 v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 99999999999886655 55776664322 22222 3368999999999977 6777899999999999988888
Q ss_pred eeCCCCCeEEEEEeCCCCEE-EEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEe---CCCcEEEEEC
Q psy11350 318 QEGHGKPVYCMSFQGDGSVV-ATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS---EDNAVKIWDL 393 (471)
Q Consensus 318 ~~~~~~~v~~~~~s~d~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s---~dg~i~iwd~ 393 (471)
+..+ ..+.+++|+|++++| ++++.++.|++||+++++.+..+. +...+.+++|+|++++|++++ .++.|++||+
T Consensus 154 ~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 154 VSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp EECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred EecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 7765 456999999999877 577789999999999998887776 556899999999999999888 6899999999
Q ss_pred CCccchheecc
Q psy11350 394 RKRRLLKWCTQ 404 (471)
Q Consensus 394 ~~~~~~~~~~~ 404 (471)
.+++++..+..
T Consensus 232 ~~~~~~~~~~~ 242 (391)
T 1l0q_A 232 GTNKITARIPV 242 (391)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCeEEEEEec
Confidence 99988776654
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.5e-28 Score=235.12 Aligned_cols=218 Identities=16% Similarity=0.183 Sum_probs=177.2
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCC-----CEEEEEEeeCCCCCCccEEEEEeCCCcEE
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDC-----NVGAIEFHPLPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 224 (471)
+|...|.+++|||+|++||+++.||.|+|||..+ ++..+. |.. .|.+++|+|++. +|++|+.||+|+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~-----~LAsgs~DGtVk 154 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIES-----SIVVGNEDGELQ 154 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSS-----CEEEEETTSEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCC-----EEEEEcCCCEEE
Confidence 5688999999999999999999999999999644 666667 665 499999999999 799999999999
Q ss_pred EEeCCCCcc-------eeee----cCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccc--------cccCCCCcceEE
Q psy11350 225 LWSLDKDTP-------LANL----EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA--------NLEGHEPFRVSR 285 (471)
Q Consensus 225 iwd~~~~~~-------~~~~----~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~--------~~~~~~~~~v~~ 285 (471)
|||+.++.. +..+ .+|. ..|.+++|+|+| +++++.|+.+++|.... .+...+...|.+
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~-~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSK-DWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCC-CCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEECCCCccccccceeeeeeeccccccc-ccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 999988753 4555 4444 489999999999 88889999977764322 232233568999
Q ss_pred EEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEE--eCCCCEEEEEeCCCeEEEEeCCC----------
Q psy11350 286 IKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSF--QGDGSVVATGGLDAFGRVWDLRT---------- 353 (471)
Q Consensus 286 l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--s~d~~~l~t~~~dg~i~iwd~~~---------- 353 (471)
++|+ ++.|++++ +++|++||+.+++......+|...|..++| +||+..|++++.||+ ++|..+.
T Consensus 232 vaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~ 307 (588)
T 2j04_A 232 LKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIA 307 (588)
T ss_dssp EEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSH
T ss_pred EEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEE
Confidence 9999 68999887 799999999988774555589999999999 999999999999999 9998742
Q ss_pred -------------CeeEEEecccCcCEEEEEEcCCCCEEEEEe
Q psy11350 354 -------------GRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383 (471)
Q Consensus 354 -------------~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s 383 (471)
+..+..+. +...|++++|+|||+.+|+++
T Consensus 308 a~~d~~v~lW~~~g~~l~~~~-~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 308 PYLEKKFKKWSTIWNEFNNYE-TTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp HHHHHHHHHTTTTTTSSSSSC-CEEEEEEEEECTTSSEEEEEE
T ss_pred EEcCCEEEEEECCCCceeeec-cceEEEEEEECCCCCEEEEEE
Confidence 11111222 244699999999999999986
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=4.5e-27 Score=230.67 Aligned_cols=240 Identities=10% Similarity=0.020 Sum_probs=201.4
Q ss_pred eeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEE
Q psy11350 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 226 (471)
.+.+|...|.+++|+|++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|++.. ++++++.|+.|++|
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~~i~~~ 239 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDL----VYCSNWISEDISVI 239 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTE----EEEEETTTTEEEEE
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCE----EEEEecCCCcEEEE
Confidence 34589999999999999999999999999999999999999999999999999999999883 33566689999999
Q ss_pred eCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeC--------CCeEEeccccc----cccCCCCcceEEEEECCCCCE
Q psy11350 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW--------DHSWRLDTPLA----NLEGHEPFRVSRIKFHPSGRF 294 (471)
Q Consensus 227 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~--------d~~~~~~~~~~----~~~~~~~~~v~~l~~~~~~~~ 294 (471)
|+.+++.+..+..+. .+.+++|+|+++++++++. |+.+.++.... ....+ ...+.+++|+|+++.
T Consensus 240 d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~ 316 (433)
T 3bws_A 240 DRKTKLEIRKTDKIG--LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-PGNKRHIVSGNTENK 316 (433)
T ss_dssp ETTTTEEEEECCCCS--EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-EECEEEEEECSSTTE
T ss_pred ECCCCcEEEEecCCC--CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC-CCCcceEEECCCCCE
Confidence 999998887777644 6999999999999998884 66655543211 11122 336889999999975
Q ss_pred E-EEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeC---------------CCeEEEEeCCCCeeEE
Q psy11350 295 L-GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGL---------------DAFGRVWDLRTGRCIM 358 (471)
Q Consensus 295 l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~---------------dg~i~iwd~~~~~~~~ 358 (471)
+ ++++.++.|++||+.+++.+..+. +...+.+++|+|++++|++++. ||.|++||+.+++.+.
T Consensus 317 l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 317 IYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred EEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 5 566889999999999988877765 6778999999999998888876 5799999999999988
Q ss_pred EecccCcCEEEEEEcCCCCEEEEEeC-CCcEEEEECCC
Q psy11350 359 FLEGHLKSVFSVDFSPDGYHLATGSE-DNAVKIWDLRK 395 (471)
Q Consensus 359 ~~~~h~~~v~~~~~sp~~~~l~s~s~-dg~i~iwd~~~ 395 (471)
.+.. ...+.+++|+|+|++|++++. |+.|++|++..
T Consensus 396 ~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 396 FWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 8875 467999999999999988875 99999999863
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=4e-28 Score=235.18 Aligned_cols=271 Identities=14% Similarity=0.092 Sum_probs=178.9
Q ss_pred CeEEEEE---ecCCCEEEEEeCCCcEEEEeCCCC----------ceEEEeecCCCCEEEEEEeeCCCC------------
Q psy11350 154 PISYCSF---SPDSQHVATASWSGLCKLWTVPEC----------ELVQTFRGHDCNVGAIEFHPLPSE------------ 208 (471)
Q Consensus 154 ~V~~~~~---s~~~~~l~tg~~dg~i~iwd~~~~----------~~~~~~~~h~~~v~~l~~~~~~~~------------ 208 (471)
...++.| +|++..|++++.++.|.+|+.... ..+.. ..+..++..+.|++....
T Consensus 17 ~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (393)
T 4gq1_A 17 RPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFT-IQTGLPTLHLSFSSSCSYSENLHDGDGNVN 95 (393)
T ss_dssp CEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEE-EECSSCEEEEEECTTCEEECC---------
T ss_pred CCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEE-EecCCCeeeEeecCCccccccccCCCccee
Confidence 4455666 344444444445888999975311 11111 134455666666532110
Q ss_pred ---CCccEEEEEeCCCcEEEEeCCCCcce-----eeecCCCCcceEEEEECC--------CCCEEEEEeCCCeEEeccc-
Q psy11350 209 ---GAVCSLASCAQDGSVKLWSLDKDTPL-----ANLEGHEPFRVSRIKFHP--------SGRFLGTCCWDHSWRLDTP- 271 (471)
Q Consensus 209 ---~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~v~~~~~s~--------~~~~i~~~~~d~~~~~~~~- 271 (471)
....+|++++.|++|+|||+.++... ..+.+|.. .|.+++|+| ++++|++++.|+++++|..
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~-~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHN-FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSS-CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCC-ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 00116999999999999999887543 34567776 899999998 8999999999999877653
Q ss_pred ----cccccCCCCcceEEEEECCCCC-EEEEEecCCeEEEEECCCCcEEEE-------------------------eeCC
Q psy11350 272 ----LANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLH-------------------------QEGH 321 (471)
Q Consensus 272 ----~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~-------------------------~~~~ 321 (471)
...+..| ...+.+++|+|++. +|++++.||+|++||+++++.... ..+|
T Consensus 175 ~~~~~~~~~~~-~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 175 DEGPILAGYPL-SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp TTEEEEEEEEC-SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred CCceeeeecCC-CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence 2334445 45799999999875 899999999999999988754322 2357
Q ss_pred CCCeEEEEEe-CCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcC--------------------CCCEEE
Q psy11350 322 GKPVYCMSFQ-GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP--------------------DGYHLA 380 (471)
Q Consensus 322 ~~~v~~~~~s-~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp--------------------~~~~l~ 380 (471)
...+.++.|+ ||++.|++++.|+++++||+.+++....+..|...+..+.+.| ++.+++
T Consensus 254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
T 4gq1_A 254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFAT 333 (393)
T ss_dssp SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEE
T ss_pred cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEE
Confidence 7788899987 6999999999999999999998877777766665555444333 344677
Q ss_pred EEeCCCcEEEEECCCccchheecccCCCccceeeccccceeeeecccCCCcccccchhhhcccccceeeecccceeeeec
Q psy11350 381 TGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPIPLLLDIQKLTFKFD 460 (471)
Q Consensus 381 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fs~d 460 (471)
+|+.||+|++||+.+++++..+. .....+..++||||
T Consensus 334 sgs~Dg~V~lwd~~~~~~~~~~~-------------------------------------------~~~~~V~svafspd 370 (393)
T 4gq1_A 334 AHSQHGLIQLINTYEKDSNSIPI-------------------------------------------QLGMPIVDFCWHQD 370 (393)
T ss_dssp EETTTTEEEEEETTCTTCCEEEE-------------------------------------------ECSSCEEEEEECTT
T ss_pred EECCCCEEEEEECCCCcEEEEec-------------------------------------------CCCCcEEEEEEcCC
Confidence 88899999999999887654322 11123568899999
Q ss_pred CCeEEEeecC
Q psy11350 461 SDLHAMVLNQ 470 (471)
Q Consensus 461 g~~lA~~~~~ 470 (471)
|++||+.++.
T Consensus 371 G~~LA~as~~ 380 (393)
T 4gq1_A 371 GSHLAIATEG 380 (393)
T ss_dssp SSEEEEEESS
T ss_pred CCEEEEEeCC
Confidence 9999998764
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=9.2e-27 Score=222.42 Aligned_cols=231 Identities=11% Similarity=0.108 Sum_probs=185.2
Q ss_pred cCeEEEEEecCCCEEE-EEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCC
Q psy11350 153 RPISYCSFSPDSQHVA-TASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKD 231 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~-tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 231 (471)
..+..+++.+++++++ +|+.|+.|++||+.+++.+..+. |...|.++.|+++. ++.+ .|+.|++||+.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~-------~~~~-~~~~i~i~d~~~~ 129 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF-------IVVS-YGDVISVFKFGNP 129 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE-------EEEE-ETTEEEEEESSTT
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE-------EEEE-EcCEEEEEECCCC
Confidence 3588889999988874 67778999999999999998887 56799999998763 3433 4789999999888
Q ss_pred -cceeeecCCCCcceEEEEECCCCCEEEE--EeCCCeEEeccc---------------------cccccCCCCcceEEEE
Q psy11350 232 -TPLANLEGHEPFRVSRIKFHPSGRFLGT--CCWDHSWRLDTP---------------------LANLEGHEPFRVSRIK 287 (471)
Q Consensus 232 -~~~~~~~~~~~~~v~~~~~s~~~~~i~~--~~~d~~~~~~~~---------------------~~~~~~~~~~~v~~l~ 287 (471)
+.+..+.. ....+++++ .++++ |+.+|.+.++.. ...+.+| ...|.+++
T Consensus 130 ~~~~~~~~~----~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h-~~~v~~~~ 202 (355)
T 3vu4_A 130 WKRITDDIR----FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH-TNPIKMVR 202 (355)
T ss_dssp CCBSSCCEE----EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCC-SSCEEEEE
T ss_pred ceeeEEecc----CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEcc-CCceEEEE
Confidence 66666554 344566677 66665 578888666432 3456666 66899999
Q ss_pred ECCCCCEEEEEecCCe-EEEEECCCCcEEEEee-C-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCee--EEEec-
Q psy11350 288 FHPSGRFLGTCCWDHS-WRLWDLNQGQEVLHQE-G-HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC--IMFLE- 361 (471)
Q Consensus 288 ~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~-~-~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~--~~~~~- 361 (471)
|+|++++|++++.|++ |++||+++++++..+. + |...|++++|+|++++|++++.|++|+|||++.+.. ...+.
T Consensus 203 ~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~ 282 (355)
T 3vu4_A 203 LNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKG 282 (355)
T ss_dssp ECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccc
Confidence 9999999999999998 9999999999999998 5 999999999999999999999999999999976531 11111
Q ss_pred --------------------ccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccch
Q psy11350 362 --------------------GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399 (471)
Q Consensus 362 --------------------~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 399 (471)
.+......++|+|++++|++++.||.+++|++..+...
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 283 WINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp TEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTT
T ss_pred eeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCC
Confidence 11223467899999999999999999999998776543
No 126
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.6e-27 Score=225.18 Aligned_cols=229 Identities=10% Similarity=0.031 Sum_probs=182.8
Q ss_pred CcCeEEEEEecCCCEEEEEeCCCcEEEEeCC---------CCceEEEee-cCCCCEEEEEEee--CCCCCCccEEEEEeC
Q psy11350 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVP---------ECELVQTFR-GHDCNVGAIEFHP--LPSEGAVCSLASCAQ 219 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~---------~~~~~~~~~-~h~~~v~~l~~~~--~~~~~~~~~l~s~~~ 219 (471)
...|.++.|+|+ +++|+.|++|++|+.. +++.+..+. +|..+|.+++|+| ++. ++++++.
T Consensus 76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----~l~s~s~ 147 (343)
T 3lrv_A 76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTE-----YFIWADN 147 (343)
T ss_dssp EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CC-----EEEEEET
T ss_pred cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCC-----EEEEEeC
Confidence 456778888887 9999999999999665 555455554 6778999999999 887 7999999
Q ss_pred CCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc-----c-ccccC-CCCcceEEEEECCCC
Q psy11350 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----L-ANLEG-HEPFRVSRIKFHPSG 292 (471)
Q Consensus 220 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~-----~-~~~~~-~~~~~v~~l~~~~~~ 292 (471)
||+|++||+.+++.......+....+.+++|+|++.++++|+.|+.++++.. . ..+.. | ...|.+++|+|++
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h-~~~v~~l~fs~~g 226 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDE-EAKIKEVKFADNG 226 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCT-TSCEEEEEECTTS
T ss_pred CCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccC-CCCEEEEEEeCCC
Confidence 9999999999998877776665557999999999999999999999777532 2 34555 5 6689999999999
Q ss_pred CEEEEEecCCeEEEEECCCCcEEEEeeC---CCCCeE--EEEEeCCCCEEEEEeC-CCeEEEEeCCCCeeEEEecccCcC
Q psy11350 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEG---HGKPVY--CMSFQGDGSVVATGGL-DAFGRVWDLRTGRCIMFLEGHLKS 366 (471)
Q Consensus 293 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~--~~~~s~d~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~h~~~ 366 (471)
.+|++++ +++|++||+++++.+..+.. |..++. +++|+|+|++|++++. |+.|+||++......... .+
T Consensus 227 ~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~ 301 (343)
T 3lrv_A 227 YWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DE 301 (343)
T ss_dssp SEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EE
T ss_pred CEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cC
Confidence 9999999 55999999999876655443 444444 6999999999999998 999999999766443332 57
Q ss_pred EEEEEEcC---CCCEEEEEeCCCcEEEEECC
Q psy11350 367 VFSVDFSP---DGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 367 v~~~~~sp---~~~~l~s~s~dg~i~iwd~~ 394 (471)
+..++|.| +...+++++.||.+.++-..
T Consensus 302 ~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 302 ESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred ceeEecCccccccceeEEEecCCceEEEEec
Confidence 88889998 88999999999999988543
No 127
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=2.4e-26 Score=241.22 Aligned_cols=308 Identities=10% Similarity=0.029 Sum_probs=217.0
Q ss_pred CcCeEEEEEecCCCEEEEEeC-CC-----cEEEEeCCCCceEEEeecCCC------------------------CEEEEE
Q psy11350 152 TRPISYCSFSPDSQHVATASW-SG-----LCKLWTVPECELVQTFRGHDC------------------------NVGAIE 201 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~~-dg-----~i~iwd~~~~~~~~~~~~h~~------------------------~v~~l~ 201 (471)
...|.+++|||||++|++++. |+ .|++||+.+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 557999999999999999998 88 899999999988777765433 378999
Q ss_pred EeeCCCCCCccEEEEEeCCCcEEEEeCCCCc--ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc----cccc
Q psy11350 202 FHPLPSEGAVCSLASCAQDGSVKLWSLDKDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP----LANL 275 (471)
Q Consensus 202 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~----~~~~ 275 (471)
|+|++. .|++++. +.|.+||+.++. ....+..+.. .+..++|+|||++|++++.+ .+.++.. ...+
T Consensus 116 ~SpDg~-----~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~-~~~~~~~SPDG~~la~~~~~-~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 116 WSPDAQ-----RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEG-FATDAKLSPKGGFVSFIRGR-NLWVIDLASGRQMQL 187 (741)
T ss_dssp ECTTSS-----EEEEEET-TEEEEEESSSCSTTSCCBCCCSSS-CEEEEEECTTSSEEEEEETT-EEEEEETTTTEEEEC
T ss_pred ECCCCC-----EEEEEeC-CcEEEEECCCCCcceEEEcccCCc-ccccccCCCCCCEEEEEeCC-cEEEEecCCCCEEEe
Confidence 999998 6777776 999999998873 3444554443 79999999999999998865 4333221 1111
Q ss_pred cCCCCc----------------ceEEEEECCCCCEEEEEecCC---------------------------------eEEE
Q psy11350 276 EGHEPF----------------RVSRIKFHPSGRFLGTCCWDH---------------------------------SWRL 306 (471)
Q Consensus 276 ~~~~~~----------------~v~~l~~~~~~~~l~~~~~dg---------------------------------~i~i 306 (471)
...... .+..++|+|||++|++++.|+ .|++
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 111111 147799999999999998776 8999
Q ss_pred EECCC-CcEEEEee--CCCCCeEEEEEeCCCCEEEEEeC-----CCeEEEEeCCCCeeEEEecccCc----CEEEEEEcC
Q psy11350 307 WDLNQ-GQEVLHQE--GHGKPVYCMSFQGDGSVVATGGL-----DAFGRVWDLRTGRCIMFLEGHLK----SVFSVDFSP 374 (471)
Q Consensus 307 wd~~~-~~~~~~~~--~~~~~v~~~~~s~d~~~l~t~~~-----dg~i~iwd~~~~~~~~~~~~h~~----~v~~~~~sp 374 (471)
||+.+ ++...... .|...+.+++| |||++|++++. +..|++||+.++++...+..+.. .+.+++|+|
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT
T ss_pred EECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC
Confidence 99988 77654433 47788999999 99999987654 56799999999988777665543 456899999
Q ss_pred CCCEEEEEeCCCcEEEEECC-CccchheecccCCCccceeeccccceeeeecccCCC--cccccchhh-hcccccceeee
Q psy11350 375 DGYHLATGSEDNAVKIWDLR-KRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLNPG--IGNIISSAL-KEQVEPIPLLL 450 (471)
Q Consensus 375 ~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~ 450 (471)
||+++++++.||.++||.++ .++ +..+.........+..++.+....++.....+ ...++.... ......+....
T Consensus 347 dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~ 425 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAP 425 (741)
T ss_dssp TSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSC
T ss_pred CCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCC
Confidence 99999999999988888776 344 44444332222222345556544333333222 233333222 22233343344
Q ss_pred cccceeeeecCCeEEEeec
Q psy11350 451 DIQKLTFKFDSDLHAMVLN 469 (471)
Q Consensus 451 ~~~~l~fs~dg~~lA~~~~ 469 (471)
.+..++|||||+.||+...
T Consensus 426 ~~~~~~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 426 GMHSASFARNASVYVDSWS 444 (741)
T ss_dssp SEEEEEECTTSSEEEEEEE
T ss_pred CceEEEECCCCCEEEEEec
Confidence 5668899999999988653
No 128
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=4.9e-24 Score=197.07 Aligned_cols=221 Identities=12% Similarity=0.113 Sum_probs=172.6
Q ss_pred EEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC-CcceeeecCCCCcceEE
Q psy11350 169 TASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK-DTPLANLEGHEPFRVSR 247 (471)
Q Consensus 169 tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~ 247 (471)
.++.++.|++||+.+++.. .+..|...|.+++|+|++. +|++++ ++.|.+||+.+ ++.......+....+.+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~-----~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 89 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGK-----YLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNND 89 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSS-----EEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSC
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCC-----EEEEEc-CCeEEEEeCCCCCCceEeccccccccccc
Confidence 3457899999999988766 4556788999999999998 677765 88999999998 87777666665557899
Q ss_pred EEECCCCCEEEEEeCC--Ce---EEec--c-ccccccCCCCcceEEEEECCCCCEEE-EEecCCeEEEEECCC-CcEEEE
Q psy11350 248 IKFHPSGRFLGTCCWD--HS---WRLD--T-PLANLEGHEPFRVSRIKFHPSGRFLG-TCCWDHSWRLWDLNQ-GQEVLH 317 (471)
Q Consensus 248 ~~~s~~~~~i~~~~~d--~~---~~~~--~-~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~iwd~~~-~~~~~~ 317 (471)
++|+|+++++++++.+ +. |.+. . ....+..+ ..+..++|+|++++|+ +++.++.+++|++.. ......
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN--LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS--SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC--CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 9999999999999843 33 3331 1 12222222 2488999999999887 778899999998632 234456
Q ss_pred eeCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCC-CCeeEEEecccCcCEEEEEEcCCCCEEEEEeCC----------
Q psy11350 318 QEGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLR-TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED---------- 385 (471)
Q Consensus 318 ~~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~-~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d---------- 385 (471)
+..|...+.+++|+|++++|++++ .++.++||++. .+..+..+..|...+.+++|+|+|++|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 247 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDL 247 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSE
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccC
Confidence 677888999999999999887766 58899999886 556677788888899999999999999988766
Q ss_pred -CcEEEEECCCccc
Q psy11350 386 -NAVKIWDLRKRRL 398 (471)
Q Consensus 386 -g~i~iwd~~~~~~ 398 (471)
+.|.+||+.+++.
T Consensus 248 ~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 248 DVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEEEETTSCSC
T ss_pred ceEEEEEecCCCCc
Confidence 4699999987654
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=2.4e-23 Score=209.22 Aligned_cols=236 Identities=12% Similarity=0.025 Sum_probs=188.7
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeC--CCCceEEEeecCCCCEEEEEEee----CCCCCCccEEEEEe-CCCcEEEEe
Q psy11350 155 ISYCSFSPDSQHVATASWSGLCKLWTV--PECELVQTFRGHDCNVGAIEFHP----LPSEGAVCSLASCA-QDGSVKLWS 227 (471)
Q Consensus 155 V~~~~~s~~~~~l~tg~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~l~~~~----~~~~~~~~~l~s~~-~dg~i~iwd 227 (471)
+.+++|+|||++|++++.++.|.+||+ .+++.+..+.. ...+..++|+| ++. ++++++ .+++|.+||
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~-----~l~v~~~~~~~v~v~D 254 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDR-----YTIAGAYWPPQFAIMD 254 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTT-----EEEEEEEESSEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCC-----EEEEEEccCCeEEEEe
Confidence 889999999999999999999999999 88998888874 45679999999 888 677776 589999999
Q ss_pred CCCCcceeeecCC----------CCcceEEEEECCCCCEEE-EEeCCCeEEecccc-----c--cccCCCCcceEEEEEC
Q psy11350 228 LDKDTPLANLEGH----------EPFRVSRIKFHPSGRFLG-TCCWDHSWRLDTPL-----A--NLEGHEPFRVSRIKFH 289 (471)
Q Consensus 228 ~~~~~~~~~~~~~----------~~~~v~~~~~s~~~~~i~-~~~~d~~~~~~~~~-----~--~~~~~~~~~v~~l~~~ 289 (471)
..+++++..+... ....+..+.++|++..++ +...++.+.++... . .+ .+ ...+..+.|+
T Consensus 255 ~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~-~~~~~~~~~s 332 (543)
T 1nir_A 255 GETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GA-APFLHDGGWD 332 (543)
T ss_dssp TTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-EC-CSSCCCEEEC
T ss_pred ccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-cc-CcCccCceEC
Confidence 9999988887642 233688999999877654 44556665443211 1 11 12 3357789999
Q ss_pred CCCCEEEEEe-cCCeEEEEECCCCcEEEEeeC----CCCCeEEEEEeCC-CCEEEEEe-CCCeEEEEeCCC-------Ce
Q psy11350 290 PSGRFLGTCC-WDHSWRLWDLNQGQEVLHQEG----HGKPVYCMSFQGD-GSVVATGG-LDAFGRVWDLRT-------GR 355 (471)
Q Consensus 290 ~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~s~d-~~~l~t~~-~dg~i~iwd~~~-------~~ 355 (471)
|+|++|++++ .+++|.+||+.+++++..+.. |.+....+ ++|+ +.+++++. .|++|.+||+.+ ++
T Consensus 333 pdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~ 411 (543)
T 1nir_A 333 SSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWK 411 (543)
T ss_dssp TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTS
T ss_pred CCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCe
Confidence 9999877665 588999999999998887764 55444333 5776 66666765 589999999998 89
Q ss_pred eEEEecccCcCEEEEEEcCCCCEEEEEe-------CCCcEEEEECCCccch
Q psy11350 356 CIMFLEGHLKSVFSVDFSPDGYHLATGS-------EDNAVKIWDLRKRRLL 399 (471)
Q Consensus 356 ~~~~~~~h~~~v~~~~~sp~~~~l~s~s-------~dg~i~iwd~~~~~~~ 399 (471)
++.++.+|.+.+..++++|+|++|++++ .+++|.|||+.+++.+
T Consensus 412 ~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 412 KVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp EEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred EEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 9999999998999999999999999987 2779999999999877
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=4e-24 Score=208.42 Aligned_cols=244 Identities=12% Similarity=0.054 Sum_probs=188.2
Q ss_pred eeeecCCcCeEEEEEec--------------CCCEEEEEeCC------CcEEEEeCCCCceEEEeecCCCCEEEEEEeeC
Q psy11350 146 CSQVGDTRPISYCSFSP--------------DSQHVATASWS------GLCKLWTVPECELVQTFRGHDCNVGAIEFHPL 205 (471)
Q Consensus 146 ~~~~gh~~~V~~~~~s~--------------~~~~l~tg~~d------g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~ 205 (471)
..+.+|...+..+++++ .+..++.++.+ +.|++||+. +.....+.+|...|.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCC
Confidence 34678888887777765 25667666644 799999987 4556777889999999999999
Q ss_pred CCCCCccEEEEEeCCC---cEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEE-EEeCCCe--EEec---c-ccccc
Q psy11350 206 PSEGAVCSLASCAQDG---SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLG-TCCWDHS--WRLD---T-PLANL 275 (471)
Q Consensus 206 ~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~-~~~~d~~--~~~~---~-~~~~~ 275 (471)
+. .|++++.++ .|++||+.+++... +..+.. .+.+++|+|+|+.|+ +++.++. +.++ . ....+
T Consensus 190 g~-----~la~~s~~~~~~~i~~~d~~tg~~~~-l~~~~~-~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 190 GS-----KLAYVTFESGRSALVIQTLANGAVRQ-VASFPR-HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV 262 (415)
T ss_dssp SS-----EEEEEECTTSSCEEEEEETTTCCEEE-EECCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEC
T ss_pred CC-----EEEEEEecCCCcEEEEEECCCCcEEE-eecCCC-cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeC
Confidence 98 789988875 99999999887653 444443 799999999999888 5565654 3322 2 12334
Q ss_pred cCCCCcceEEEEECCCCCEEEEEec-CC--eEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCC---CeEEEE
Q psy11350 276 EGHEPFRVSRIKFHPSGRFLGTCCW-DH--SWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLD---AFGRVW 349 (471)
Q Consensus 276 ~~~~~~~v~~l~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~d---g~i~iw 349 (471)
..+ ...+.+++|+|+|++|++++. ++ .|++||+.+++. ..+..+...+.+++|+|||++|++++.+ ..|++|
T Consensus 263 ~~~-~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 263 TDG-RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp CCC-SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred cCC-CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEE
Confidence 444 457999999999999998886 44 688889988764 4455677889999999999999988764 589999
Q ss_pred eCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCC---cEEEEECCCccchhee
Q psy11350 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN---AVKIWDLRKRRLLKWC 402 (471)
Q Consensus 350 d~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg---~i~iwd~~~~~~~~~~ 402 (471)
|+.+++.. .+..|. .+.+++|+|+|++|++++.++ .|++||+..+ .+..+
T Consensus 341 d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~-~~~~l 393 (415)
T 2hqs_A 341 DLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR-FKARL 393 (415)
T ss_dssp ETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC-CEEEC
T ss_pred ECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC-cEEEe
Confidence 99988764 555554 899999999999999988877 7999998744 34444
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=3e-23 Score=197.39 Aligned_cols=282 Identities=9% Similarity=-0.010 Sum_probs=208.9
Q ss_pred CCcCeEEEEEecCCCEEEEEeC-------CCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcE
Q psy11350 151 DTRPISYCSFSPDSQHVATASW-------SGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223 (471)
Q Consensus 151 h~~~V~~~~~s~~~~~l~tg~~-------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 223 (471)
....+..++|+|+|++|++++. ++.|.+||..+++.+..+... ..+..++|+|++.. ++++...++.|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~----l~v~~~~~~~v 113 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQT----LWFGNTVNSAV 113 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTE----EEEEETTTTEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCE----EEEEecCCCEE
Confidence 3456889999999999988874 468999999999988887753 44678999999873 45556668999
Q ss_pred EEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEe--cC
Q psy11350 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC--WD 301 (471)
Q Consensus 224 ~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~--~d 301 (471)
.+||+.+++.+..+..+... .........+.+++|+|+++++++++ .+
T Consensus 114 ~~~d~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 163 (353)
T 3vgz_A 114 TAIDAKTGEVKGRLVLDDRK------------------------------RTEEVRPLQPRELVADDATNTVYISGIGKE 163 (353)
T ss_dssp EEEETTTCCEEEEEESCCCC------------------------------CCSSCCCCEEEEEEEETTTTEEEEEEESSS
T ss_pred EEEeCCCCeeEEEEecCCCc------------------------------cccccCCCCCceEEECCCCCEEEEEecCCC
Confidence 99999998877666543320 00000022368899999999887776 47
Q ss_pred CeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecc----cCcCEEEEEEcCCCC
Q psy11350 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG----HLKSVFSVDFSPDGY 377 (471)
Q Consensus 302 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~----h~~~v~~~~~sp~~~ 377 (471)
+.|.+||+.+++.+..+..+...+.+++|+|+|++|++++.++.|.+||+.+++.+..+.. +...+.+++|+|+|+
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 243 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ 243 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC
Confidence 8899999999998888876666788999999999999999999999999999988877664 455788999999999
Q ss_pred EEEEEeC-CCcEEEEECCCccchheecccCCCccceeeccccceeeeecccCCCcccccchhhhcccccceeeeccccee
Q psy11350 378 HLATGSE-DNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPIPLLLDIQKLT 456 (471)
Q Consensus 378 ~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 456 (471)
++++++. ++.|.+||+.+++.+..+....+ ..+.+..+....++.....+...++.......+..++.......++
T Consensus 244 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 320 (353)
T 3vgz_A 244 RAFITDSKAAEVLVVDTRNGNILAKVAAPES---LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLA 320 (353)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSSC---CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCcEEEEEEcCCC---ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEE
Confidence 7776655 49999999999998887765433 2244455554333333333334444444444444455545678899
Q ss_pred eeecCCeEEEeecC
Q psy11350 457 FKFDSDLHAMVLNQ 470 (471)
Q Consensus 457 fs~dg~~lA~~~~~ 470 (471)
|+|||++|.+...+
T Consensus 321 ~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 321 LSADGKTLYVSVKQ 334 (353)
T ss_dssp ECTTSCEEEEEEEC
T ss_pred EcCCCCEEEEEEcc
Confidence 99999988776543
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=3.2e-23 Score=208.39 Aligned_cols=298 Identities=10% Similarity=0.017 Sum_probs=211.4
Q ss_pred EEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeC--CCCcceee
Q psy11350 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL--DKDTPLAN 236 (471)
Q Consensus 159 ~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~ 236 (471)
+|+|++.++++++.+++|.+||..+++++.++..+.. +..++|+|++. +|++++.|++|.+||+ .+++.+..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~-----~l~v~~~d~~V~v~D~~~~t~~~~~~ 217 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGR-----YLLVIGRDARIDMIDLWAKEPTKVAE 217 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSC-----EEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCC-----EEEEECCCCeEEEEECcCCCCcEEEE
Confidence 3799999999999999999999999999999984333 88999999998 7999999999999999 78888888
Q ss_pred ecCCCCcceEEEEECC----CCCEEEEEeC-CCeEEeccc-----cccccC----------CCCcceEEEEECCCCCE-E
Q psy11350 237 LEGHEPFRVSRIKFHP----SGRFLGTCCW-DHSWRLDTP-----LANLEG----------HEPFRVSRIKFHPSGRF-L 295 (471)
Q Consensus 237 ~~~~~~~~v~~~~~s~----~~~~i~~~~~-d~~~~~~~~-----~~~~~~----------~~~~~v~~l~~~~~~~~-l 295 (471)
+.... .+..++|+| +|+++++++. ++.+.++.. ...+.. |....+..+.++|++.. +
T Consensus 218 i~~g~--~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 218 IKIGI--EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp EECCS--EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred EecCC--CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 77533 689999999 9999998884 677655421 222221 22336889999997765 5
Q ss_pred EEEecCCeEEEEECCCCcEEE--EeeCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCCCeeEEEecc----cCcCEE
Q psy11350 296 GTCCWDHSWRLWDLNQGQEVL--HQEGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTGRCIMFLEG----HLKSVF 368 (471)
Q Consensus 296 ~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~----h~~~v~ 368 (471)
++...++.|.+||+.+.+.+. .+ .+...+.++.|+|+|++|++++ .+++|.+||+.+++++..+.. |.+...
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~ 374 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGA 374 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCE
T ss_pred EEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCc
Confidence 566778999999998865443 33 3566788999999999776554 689999999999999888774 554444
Q ss_pred EEEEcCC-CCEEEEEe-CCCcEEEEECCC-------ccchheecccCCCccceeeccccceeeeecc-cCC-----Cccc
Q psy11350 369 SVDFSPD-GYHLATGS-EDNAVKIWDLRK-------RRLLKWCTQLLPNSIGVTSLLTDLYIDVLES-LNP-----GIGN 433 (471)
Q Consensus 369 ~~~~sp~-~~~l~s~s-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~-----~~~~ 433 (471)
.+ ++|+ +..++++. .|++|.+||+.+ .++++++..+.. ....+.+..+........ .++ +...
T Consensus 375 ~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~-~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~ 452 (543)
T 1nir_A 375 NF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGG-GSLFIKTHPKSSHLYVDTTFNPDARISQSVA 452 (543)
T ss_dssp EE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS-CCCCEECCTTCCEEEECCTTCSSHHHHTCEE
T ss_pred cc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCC-CceEEEcCCCCCcEEEecCCCCCcccCceEE
Confidence 44 5676 66777775 689999999998 788887765432 223333444433332221 111 1222
Q ss_pred ccchhhhccc-cccee---------eecccceeeeecCCeEEEe
Q psy11350 434 IISSALKEQV-EPIPL---------LLDIQKLTFKFDSDLHAMV 467 (471)
Q Consensus 434 ~~~~~~~~~~-~~~~~---------~~~~~~l~fs~dg~~lA~~ 467 (471)
++........ ..++. ...+..++|+|||+.+.+.
T Consensus 453 v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s 496 (543)
T 1nir_A 453 VFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFS 496 (543)
T ss_dssp EEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEE
T ss_pred EEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEE
Confidence 2222222212 12111 2245678999999988865
No 133
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=1.1e-24 Score=227.90 Aligned_cols=307 Identities=13% Similarity=0.039 Sum_probs=206.2
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCC---CEEEEEEeeCCCCCCccEEEEEeCC---------C
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDC---NVGAIEFHPLPSEGAVCSLASCAQD---------G 221 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~~~~~l~s~~~d---------g 221 (471)
.+.+++|+|||+++++ +.||.|++||+.+++....+..|.. .|.+++|+|++. +|++++.+ +
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~-----~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDRE-----YALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSS-----EEEEEESCCCCSSSCCCS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCC-----EEEEEecCccceeeccee
Confidence 4667899999998877 6799999999999998888877765 499999999998 68888764 7
Q ss_pred cEEEEeCCCCcceeeecCCC--CcceEEEEECCCCCEEEEEeCCCeEEeccc----cccc-cCCCC--------------
Q psy11350 222 SVKLWSLDKDTPLANLEGHE--PFRVSRIKFHPSGRFLGTCCWDHSWRLDTP----LANL-EGHEP-------------- 280 (471)
Q Consensus 222 ~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~----~~~~-~~~~~-------------- 280 (471)
.|.+||+.+++. ..+.... ...+..++|+|||+.|++++.. .+.++.. ...+ ..+..
T Consensus 92 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~-~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~e 169 (723)
T 1xfd_A 92 YYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFEN-NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEE 169 (723)
T ss_dssp EEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETT-EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHH
T ss_pred eEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEECC-eEEEEECCCCceEEEecCCCCCceECcccceeEEE
Confidence 888999988876 3332221 1247889999999999999874 4333221 1111 11111
Q ss_pred ---cceEEEEECCCCCEEEEEecCC----------------------------------eEEEEECCCCcEEEEeeCC--
Q psy11350 281 ---FRVSRIKFHPSGRFLGTCCWDH----------------------------------SWRLWDLNQGQEVLHQEGH-- 321 (471)
Q Consensus 281 ---~~v~~l~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~~~~~~~-- 321 (471)
..+.+++|+|||++|++++.++ .|++||+.+++....+..+
T Consensus 170 e~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~ 249 (723)
T 1xfd_A 170 EILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDD 249 (723)
T ss_dssp TTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCC
T ss_pred EeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCcc
Confidence 1237899999999999987653 7999999988765555544
Q ss_pred ----CCCeEEEEEeCCCCEEEEEeC----CCeEEEEeCCCCeeEEEecc-cCcCE----EEEEEcCCCCEEEE--EeCCC
Q psy11350 322 ----GKPVYCMSFQGDGSVVATGGL----DAFGRVWDLRTGRCIMFLEG-HLKSV----FSVDFSPDGYHLAT--GSEDN 386 (471)
Q Consensus 322 ----~~~v~~~~~s~d~~~l~t~~~----dg~i~iwd~~~~~~~~~~~~-h~~~v----~~~~~sp~~~~l~s--~s~dg 386 (471)
...+.+++|+|||++|++.+. +..|++||+.++++...+.. +...+ ..++|+|||+.|+. +..++
T Consensus 250 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 329 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQG 329 (723)
T ss_dssp GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCS
T ss_pred CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccC
Confidence 567899999999998877643 35799999999987766543 33333 37899999997764 45667
Q ss_pred ------cEEEEE-CCCccc--hheecccCCCccceeeccccceeeeecccCC--Ccccccchhhhc--cccccee----e
Q psy11350 387 ------AVKIWD-LRKRRL--LKWCTQLLPNSIGVTSLLTDLYIDVLESLNP--GIGNIISSALKE--QVEPIPL----L 449 (471)
Q Consensus 387 ------~i~iwd-~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~----~ 449 (471)
.|.+|| ...+.. ...+............++.|....++..... ....++...... ....+.. .
T Consensus 330 ~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~ 409 (723)
T 1xfd_A 330 GRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVEN 409 (723)
T ss_dssp SSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSS
T ss_pred CCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCC
Confidence 577777 344441 4444322112222345666655544333332 333333322211 1222221 2
Q ss_pred ecccceeeeecCCeEEEee
Q psy11350 450 LDIQKLTFKFDSDLHAMVL 468 (471)
Q Consensus 450 ~~~~~l~fs~dg~~lA~~~ 468 (471)
..+..++|||||+.||+..
T Consensus 410 ~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 410 CTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp CCCCEEEECTTSSEEEEEC
T ss_pred CCeEEEEECCCCCEEEEEc
Confidence 3467899999999998754
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=8.2e-23 Score=199.09 Aligned_cols=220 Identities=15% Similarity=0.096 Sum_probs=175.4
Q ss_pred eeeecCCcCeEEEEEecCCCEEEEEeCCC---cEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEE-EEeCCC
Q psy11350 146 CSQVGDTRPISYCSFSPDSQHVATASWSG---LCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLA-SCAQDG 221 (471)
Q Consensus 146 ~~~~gh~~~V~~~~~s~~~~~l~tg~~dg---~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~-s~~~dg 221 (471)
..+.+|...|.+++|||||++|++++.++ .|++||+.+++.. .+..|...+.+++|+|++. .|+ +++.++
T Consensus 172 ~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~-----~la~~~~~~g 245 (415)
T 2hqs_A 172 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGS-----KLAFALSKTG 245 (415)
T ss_dssp EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSS-----EEEEEECTTS
T ss_pred EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCC-----EEEEEEecCC
Confidence 45567999999999999999999999875 9999999998875 5677888999999999998 465 666666
Q ss_pred c--EEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCC-Ce--EEe---ccc-cccccCCCCcceEEEEECCCC
Q psy11350 222 S--VKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD-HS--WRL---DTP-LANLEGHEPFRVSRIKFHPSG 292 (471)
Q Consensus 222 ~--i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d-~~--~~~---~~~-~~~~~~~~~~~v~~l~~~~~~ 292 (471)
. |.+||+.+++. ..+..+.. .+.+++|+|+|++|++++.+ +. +.+ ... ...+..+ ...+.+++|+|+|
T Consensus 246 ~~~i~~~d~~~~~~-~~l~~~~~-~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~-~~~~~~~~~spdG 322 (415)
T 2hqs_A 246 SLNLYVMDLASGQI-RQVTDGRS-NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE-GSQNQDADVSSDG 322 (415)
T ss_dssp SCEEEEEETTTCCE-EECCCCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS-SSEEEEEEECTTS
T ss_pred CceEEEEECCCCCE-EeCcCCCC-cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC-CCcccCeEECCCC
Confidence 5 99999988765 44555543 79999999999999988864 43 222 221 2223333 4578899999999
Q ss_pred CEEEEEecC---CeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCC---eEEEEeCCCCeeEEEecccCcC
Q psy11350 293 RFLGTCCWD---HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDA---FGRVWDLRTGRCIMFLEGHLKS 366 (471)
Q Consensus 293 ~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg---~i~iwd~~~~~~~~~~~~h~~~ 366 (471)
++|++++.+ +.|++||+.+++.. .+..+. .+.+++|+|||++|++++.++ .|++||+. +.....+.+|.+.
T Consensus 323 ~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~ 399 (415)
T 2hqs_A 323 KFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQ 399 (415)
T ss_dssp SEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSE
T ss_pred CEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCC
Confidence 999988865 58999999988764 455554 899999999999999988777 79999986 5567788899999
Q ss_pred EEEEEEcCCCC
Q psy11350 367 VFSVDFSPDGY 377 (471)
Q Consensus 367 v~~~~~sp~~~ 377 (471)
|.+++|+|...
T Consensus 400 v~~~~~~~~~~ 410 (415)
T 2hqs_A 400 VKFPAWSPYLH 410 (415)
T ss_dssp EEEEEECCCCC
T ss_pred CcCCccccccc
Confidence 99999999643
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=1.6e-22 Score=191.39 Aligned_cols=241 Identities=13% Similarity=0.123 Sum_probs=174.8
Q ss_pred ecCCcCeEEEEEecCCCEEEEEeCC-CcEEEEeCC--CCc--eEEEeecCCCCEEEEEEeeCCCCCCccEEEEEe-CCCc
Q psy11350 149 VGDTRPISYCSFSPDSQHVATASWS-GLCKLWTVP--ECE--LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA-QDGS 222 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~~l~tg~~d-g~i~iwd~~--~~~--~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~-~dg~ 222 (471)
..|...+.+++|+|+|++|++++.+ +.|.+|++. +++ .+..+..+. .+..++|+|++. +|++++ .++.
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~-----~l~~~~~~~~~ 107 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQ-----FVFVGSYNAGN 107 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSS-----EEEEEETTTTE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCC-----EEEEEecCCCe
Confidence 4577889999999999999988876 999999997 554 344555444 788999999998 465555 5889
Q ss_pred EEEEeCC---CCcceeeecCCCCcceEEEEECCCCCEEEEEe-CCCeEEeccccc----------cccCCCCcceEEEEE
Q psy11350 223 VKLWSLD---KDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHSWRLDTPLA----------NLEGHEPFRVSRIKF 288 (471)
Q Consensus 223 i~iwd~~---~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~-~d~~~~~~~~~~----------~~~~~~~~~v~~l~~ 288 (471)
|.+||+. +......+.... .+.+++|+|+|+++++++ .++.+.++.... ....+....+..++|
T Consensus 108 i~~~d~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 1ri6_A 108 VSVTRLEDGLPVGVVDVVEGLD--GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF 185 (343)
T ss_dssp EEEEEEETTEEEEEEEEECCCT--TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEE
T ss_pred EEEEECCCCccccccccccCCC--CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEE
Confidence 9999994 333444444433 588999999999888887 777755533211 222233446889999
Q ss_pred CCCCCEEEEEe-cCCeEEEEECCC--CcE--EEEee----CC--CCCeEEEEEeCCCCEEEE-EeCCCeEEEEeCC--C-
Q psy11350 289 HPSGRFLGTCC-WDHSWRLWDLNQ--GQE--VLHQE----GH--GKPVYCMSFQGDGSVVAT-GGLDAFGRVWDLR--T- 353 (471)
Q Consensus 289 ~~~~~~l~~~~-~dg~i~iwd~~~--~~~--~~~~~----~~--~~~v~~~~~s~d~~~l~t-~~~dg~i~iwd~~--~- 353 (471)
+|+++++++++ .++.|.+||+.. ++. ..... ++ ...+.+++|+|+|++|++ +..++.|.+||+. +
T Consensus 186 ~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~ 265 (343)
T 1ri6_A 186 HPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGS 265 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCC
Confidence 99999776655 789999999953 432 22222 11 235678999999987774 4578999999998 3
Q ss_pred -CeeEEEecccCcCEEEEEEcCCCCEEEEEe-CCCcEEEEEC--CCccc
Q psy11350 354 -GRCIMFLEGHLKSVFSVDFSPDGYHLATGS-EDNAVKIWDL--RKRRL 398 (471)
Q Consensus 354 -~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s-~dg~i~iwd~--~~~~~ 398 (471)
.+.+..+..+.. +.+++|+|+|++|++++ .++.|.+|++ .+++.
T Consensus 266 ~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 266 VLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp CEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred ceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 345555554544 88999999999888887 6799999954 45543
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=3e-23 Score=191.71 Aligned_cols=230 Identities=15% Similarity=0.124 Sum_probs=178.3
Q ss_pred eeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCC-CceEEEeecC-CCCEEEEEEeeCCCCCCccEEEEEe--CCCc
Q psy11350 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE-CELVQTFRGH-DCNVGAIEFHPLPSEGAVCSLASCA--QDGS 222 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~-~~~~~~~~~h-~~~v~~l~~~~~~~~~~~~~l~s~~--~dg~ 222 (471)
.+..|...|.+++|+|+|++|++++ ++.|++||+.+ ++....+..| ...+.+++|+|++. +|++++ .++.
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-----~l~~~~~~~~~~ 109 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA-----LYAISDKVEFGK 109 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS-----EEEEEECTTTSS
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCC-----EEEEEEeCCCCc
Confidence 3456889999999999999999988 88999999999 8877777666 36788999999998 688887 3345
Q ss_pred EEEEe--CCCCcceeeecCCCCcceEEEEECCCCCEEE-EEeCCCeEEecc------ccccccCCCCcceEEEEECCCCC
Q psy11350 223 VKLWS--LDKDTPLANLEGHEPFRVSRIKFHPSGRFLG-TCCWDHSWRLDT------PLANLEGHEPFRVSRIKFHPSGR 293 (471)
Q Consensus 223 i~iwd--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~-~~~~d~~~~~~~------~~~~~~~~~~~~v~~l~~~~~~~ 293 (471)
..||. +.++. ...+..+. .+..++|+|++++++ ++..++.+.++. ....+..+ ...+.+++|+|+++
T Consensus 110 ~~l~~~~~~~~~-~~~~~~~~--~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~ 185 (297)
T 2ojh_A 110 SAIYLLPSTGGT-PRLMTKNL--PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG-EGRNDGPDYSPDGR 185 (297)
T ss_dssp CEEEEEETTCCC-CEECCSSS--SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS-SSCEEEEEECTTSS
T ss_pred ceEEEEECCCCc-eEEeecCC--CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC-CCccccceECCCCC
Confidence 55554 44444 33343333 488899999999887 677777644432 12223333 45799999999999
Q ss_pred EEEEEe-cCCeEEEEECC-CCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCC-----------CeEEEEeCCCCee--EE
Q psy11350 294 FLGTCC-WDHSWRLWDLN-QGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLD-----------AFGRVWDLRTGRC--IM 358 (471)
Q Consensus 294 ~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~d-----------g~i~iwd~~~~~~--~~ 358 (471)
+|++++ .++.+++|++. .+..+..+..|...+.+++|+|+|++|++++.+ +.|++||+.+++. +.
T Consensus 186 ~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 186 WIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred EEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 888776 58999999886 456677777888889999999999999888765 5699999988865 44
Q ss_pred EecccCcCEEEEEEcCCCCEEEEEeCCC
Q psy11350 359 FLEGHLKSVFSVDFSPDGYHLATGSEDN 386 (471)
Q Consensus 359 ~~~~h~~~v~~~~~sp~~~~l~s~s~dg 386 (471)
.+.+|...+.+++|+|++++|++++.+.
T Consensus 266 ~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 266 DLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ccCCCCcccccceECCCCCEEEEEEecc
Confidence 4557888999999999999998887654
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=3.3e-22 Score=188.60 Aligned_cols=239 Identities=11% Similarity=0.032 Sum_probs=177.1
Q ss_pred cCCcCeEEEEEecCCCEEEEEeC-CCcEEEEeCCCCce-EEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCC---cEE
Q psy11350 150 GDTRPISYCSFSPDSQHVATASW-SGLCKLWTVPECEL-VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG---SVK 224 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~-dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg---~i~ 224 (471)
.+...+ +++|+|+|++|++++. ++.|.+||+.+++. ...+..+..+..+++|+|++. +++++..++ .|.
T Consensus 38 ~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~-----~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 38 LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQ-----FAVTVTGLNHPFNMQ 111 (331)
T ss_dssp CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSS-----EEEECCCSSSSCEEE
T ss_pred ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCC-----EEEEecCCCCcccEE
Confidence 445566 9999999998777665 88999999999987 777777777776699999998 577544443 899
Q ss_pred EEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEe-CCCe-EEecccc---------ccccCCCCcceEEEEECCCCC
Q psy11350 225 LWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHS-WRLDTPL---------ANLEGHEPFRVSRIKFHPSGR 293 (471)
Q Consensus 225 iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~-~d~~-~~~~~~~---------~~~~~~~~~~v~~l~~~~~~~ 293 (471)
+||+.+++.+..+.... ...+++|+|+|+++++++ .++. +.++... ...... ...+..++|+|+|+
T Consensus 112 v~d~~~~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~ 188 (331)
T 3u4y_A 112 SYSFLKNKFISTIPIPY--DAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGN 188 (331)
T ss_dssp EEETTTTEEEEEEECCT--TEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSS
T ss_pred EEECCCCCeEEEEECCC--CccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCC
Confidence 99999998887776544 578999999998666554 4354 4432210 111111 33578999999999
Q ss_pred EEEEEe-cCCeEEEEECCCCcE---EEEeeCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCCCee--EEEeccc---
Q psy11350 294 FLGTCC-WDHSWRLWDLNQGQE---VLHQEGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTGRC--IMFLEGH--- 363 (471)
Q Consensus 294 ~l~~~~-~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~~~~--~~~~~~h--- 363 (471)
++++++ .++.|.+||+.+++. +..+..+ ..+..++|+|||++|++++ .++.|.+||+.+++. +..+..+
T Consensus 189 ~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 267 (331)
T 3u4y_A 189 FAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLI 267 (331)
T ss_dssp EEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCC
T ss_pred EEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccccccc
Confidence 766555 689999999999887 7666643 5667899999999776554 578899999999876 4433322
Q ss_pred -Cc---CEEEEEEcCCCCEEEEEe-CCCcEEEEECCCccc
Q psy11350 364 -LK---SVFSVDFSPDGYHLATGS-EDNAVKIWDLRKRRL 398 (471)
Q Consensus 364 -~~---~v~~~~~sp~~~~l~s~s-~dg~i~iwd~~~~~~ 398 (471)
.. ....++|+|+|++|++++ .++.|.+||+.....
T Consensus 268 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 268 DPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp CCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred CCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 22 235689999999886655 467999999987654
No 138
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=5.8e-23 Score=209.41 Aligned_cols=233 Identities=13% Similarity=0.010 Sum_probs=174.0
Q ss_pred CcCeEEEEEecCCCEEEEEeC-CCcEEEEeCCCCceEEEeecCC-CCEEEEEEeeCCCCCCccEEEEEeC---CCcEEEE
Q psy11350 152 TRPISYCSFSPDSQHVATASW-SGLCKLWTVPECELVQTFRGHD-CNVGAIEFHPLPSEGAVCSLASCAQ---DGSVKLW 226 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~~-dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~~~~~l~s~~~---dg~i~iw 226 (471)
..+|.+++|+|||++||+++. +|++.||++.+++..+ +..|. ..+..++|+|+ . ++++++. +....+|
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~-----~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-R-----VILVRDVSKGAEQHALF 93 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-E-----EEEEEECSTTSCCEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC-e-----EEEEeccCCCCcceEEE
Confidence 347999999999999998886 9999999996665544 44444 68999999998 4 6777765 4556676
Q ss_pred eCCC--CcceeeecCCCCcceEEEEECCCCCE--EEEEeCCCeE--Eecccc-ccccCCCCcceEEEEECCCCCEEEEEe
Q psy11350 227 SLDK--DTPLANLEGHEPFRVSRIKFHPSGRF--LGTCCWDHSW--RLDTPL-ANLEGHEPFRVSRIKFHPSGRFLGTCC 299 (471)
Q Consensus 227 d~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~--i~~~~~d~~~--~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~~~~ 299 (471)
.+.. ......+.... .+...+|+|+|+. +++++.++.+ ++.... ..+..+ . ..+++|+|||++|++++
T Consensus 94 ~~~~~~~g~~~~l~~~~--~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~-~--~~~~~~spDG~~la~~~ 168 (582)
T 3o4h_A 94 KVNTSRPGEEQRLEAVK--PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARL-P--GFGFVSDIRGDLIAGLG 168 (582)
T ss_dssp EEETTSTTCCEECTTSC--SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEE-S--SCEEEEEEETTEEEEEE
T ss_pred EEeccCCCccccccCCC--CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecC-C--CceEEECCCCCEEEEEE
Confidence 5533 22222333333 3446688888764 4444455543 322211 122222 1 17899999999999888
Q ss_pred cC----CeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCC--eEEEEeCCCCeeEEEecccCcCEEEEE--
Q psy11350 300 WD----HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDA--FGRVWDLRTGRCIMFLEGHLKSVFSVD-- 371 (471)
Q Consensus 300 ~d----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~~~-- 371 (471)
.+ +.|++||+.+++.. .+..|...+..++|+|||++|+++..++ .|++||+.+++.. .+.+|...+..++
T Consensus 169 ~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~ 246 (582)
T 3o4h_A 169 FFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPT 246 (582)
T ss_dssp EEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCS
T ss_pred EcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhc
Confidence 77 78999999988754 6678888999999999999999888888 8999999999887 7777877777777
Q ss_pred ------EcCCCCEEEEEeCCCcEEEEECCCccchh
Q psy11350 372 ------FSPDGYHLATGSEDNAVKIWDLRKRRLLK 400 (471)
Q Consensus 372 ------~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 400 (471)
|+|||.++++++.||++++|++ ++.+.
T Consensus 247 ~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~ 279 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVARREGRSAVFID--GERVE 279 (582)
T ss_dssp EEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC
T ss_pred cccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec
Confidence 9999999999999999999999 66554
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=6.7e-22 Score=214.85 Aligned_cols=230 Identities=11% Similarity=0.012 Sum_probs=186.3
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeec-----------CCCCEEEEEEe-eCCCCCCccEEEEEeCCC
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRG-----------HDCNVGAIEFH-PLPSEGAVCSLASCAQDG 221 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-----------h~~~v~~l~~~-~~~~~~~~~~l~s~~~dg 221 (471)
.+.+++|+|||++|+++. ++.|++|++... .+..+.. |...+.+++|+ |++. .|++++ ++
T Consensus 246 ~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~-----~la~~~-~~ 317 (1045)
T 1k32_A 246 DYYPRHLNTDGRRILFSK-GGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGD-----LIAFVS-RG 317 (1045)
T ss_dssp SSCEEEEEESSSCEEEEE-TTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGG-----CEEEEE-TT
T ss_pred CcceeeEcCCCCEEEEEe-CCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCC-----EEEEEE-cC
Confidence 466789999999999886 899999999544 3445554 33468899999 9998 477766 88
Q ss_pred cEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEE-eccc----cccccCCCCcceEEEEECCCCCEEE
Q psy11350 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR-LDTP----LANLEGHEPFRVSRIKFHPSGRFLG 296 (471)
Q Consensus 222 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~-~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~ 296 (471)
.|.+|++.++.... +..+....+..++|+ +|+.+++++.+..+. ++.. ...+..+ ...+..++|+|+|++|+
T Consensus 318 ~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~-~~~~~~~~~SpDG~~la 394 (1045)
T 1k32_A 318 QAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEEN-LGNVFAMGVDRNGKFAV 394 (1045)
T ss_dssp EEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCC-CCSEEEEEECTTSSEEE
T ss_pred EEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCC-ccceeeeEECCCCCEEE
Confidence 99999998776443 444444478999999 999999988866544 4321 2233333 56799999999999999
Q ss_pred EEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCC----------eEEEEeCCCCeeEEEecccCcC
Q psy11350 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDA----------FGRVWDLRTGRCIMFLEGHLKS 366 (471)
Q Consensus 297 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg----------~i~iwd~~~~~~~~~~~~h~~~ 366 (471)
+++.++.|++||+.+++......+|...+.+++|+|||++|++++.++ .|++||+.+++ +..+..|...
T Consensus 395 ~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~ 473 (1045)
T 1k32_A 395 VANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSH 473 (1045)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSB
T ss_pred EECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcc
Confidence 999999999999999988877778999999999999999998887654 89999999887 6677888888
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 367 VFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 367 v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
+.+++|+|||++|++++.++...+|+...
T Consensus 474 ~~~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 474 DYAPAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp EEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred cCCceEcCCCCEEEEEecccCCcCcchhc
Confidence 99999999999999999988888887653
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=1.8e-22 Score=210.68 Aligned_cols=300 Identities=10% Similarity=0.057 Sum_probs=196.0
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCCCCceE-EEeecCC-----------------CCEEEEEEeeCCCCCCccEEEE
Q psy11350 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELV-QTFRGHD-----------------CNVGAIEFHPLPSEGAVCSLAS 216 (471)
Q Consensus 155 V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~-~~~~~h~-----------------~~v~~l~~~~~~~~~~~~~l~s 216 (471)
+..+.|+ |..+++++.+| | +||+.+++.+ ..+..|. ..|.+++|+|+ . .++.
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~-----~~~~ 97 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-G-----LVVL 97 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-T-----EEEE
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-C-----eEEE
Confidence 4446788 66777777787 8 9999998873 3333332 56999999999 5 3444
Q ss_pred EeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc---------ccccCCCCcc-----
Q psy11350 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL---------ANLEGHEPFR----- 282 (471)
Q Consensus 217 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~---------~~~~~~~~~~----- 282 (471)
+ .++.|.+||+.+++....... .. .+.+++|+|||++|+++ .++.+.++... ..+.......
T Consensus 98 ~-~~~~i~~~d~~~~~~~~l~~~-~~-~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 173 (706)
T 2z3z_A 98 F-TQGGLVGFDMLARKVTYLFDT-NE-ETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQ 173 (706)
T ss_dssp E-ETTEEEEEETTTTEEEEEECC-TT-CCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESS
T ss_pred E-ECCEEEEEECCCCceEEccCC-cc-cccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEccc
Confidence 4 469999999988866544433 22 67889999999999986 45664443221 1111111111
Q ss_pred ---------eEEEEECCCCCEEEEEe---------------------------------cCCeEEEEECCCCcEEEEee-
Q psy11350 283 ---------VSRIKFHPSGRFLGTCC---------------------------------WDHSWRLWDLNQGQEVLHQE- 319 (471)
Q Consensus 283 ---------v~~l~~~~~~~~l~~~~---------------------------------~dg~i~iwd~~~~~~~~~~~- 319 (471)
+.++.|+|||++|++++ .+..|++||+.+++......
T Consensus 174 ~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 253 (706)
T 2z3z_A 174 AVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG 253 (706)
T ss_dssp CCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC
T ss_pred chhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC
Confidence 47899999999999987 44689999999887654442
Q ss_pred -CCCCCeEEEEEeCCCCEEEEEeCCC-----eEEEEeCCCCeeEEEec-c-cCc---CEEEEEEcC--CCCEEEEEeCCC
Q psy11350 320 -GHGKPVYCMSFQGDGSVVATGGLDA-----FGRVWDLRTGRCIMFLE-G-HLK---SVFSVDFSP--DGYHLATGSEDN 386 (471)
Q Consensus 320 -~~~~~v~~~~~s~d~~~l~t~~~dg-----~i~iwd~~~~~~~~~~~-~-h~~---~v~~~~~sp--~~~~l~s~s~dg 386 (471)
.|...+.+++|+|||++|++++.++ .|++||+.+++....+. . +.. .+.+++|+| ||+++++++.||
T Consensus 254 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g 333 (706)
T 2z3z_A 254 EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG 333 (706)
T ss_dssp SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS
T ss_pred CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC
Confidence 4677899999999999999987775 89999999984333332 1 222 246789999 999999999999
Q ss_pred cEEEEECC-CccchheecccCCCccceeeccccceeeeecccCCC--cccccch-hhhcccccceeeecccceeeeecCC
Q psy11350 387 AVKIWDLR-KRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLNPG--IGNIISS-ALKEQVEPIPLLLDIQKLTFKFDSD 462 (471)
Q Consensus 387 ~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~l~fs~dg~ 462 (471)
.++||+++ +++.+..+.........+..++.+....++.....+ ...++.. ........+.....+..++|||||+
T Consensus 334 ~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~ 413 (706)
T 2z3z_A 334 WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGS 413 (706)
T ss_dssp SCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSS
T ss_pred ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCC
Confidence 99999886 566555554332222222455556544433333322 1222221 1112233444444567899999999
Q ss_pred eEEEee
Q psy11350 463 LHAMVL 468 (471)
Q Consensus 463 ~lA~~~ 468 (471)
+++...
T Consensus 414 ~l~~~~ 419 (706)
T 2z3z_A 414 AIIDIF 419 (706)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 988764
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=1.3e-21 Score=184.52 Aligned_cols=231 Identities=10% Similarity=0.088 Sum_probs=169.7
Q ss_pred EEEecCCCE-EEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEe-CCCcEEEEeCCCCcc-e
Q psy11350 158 CSFSPDSQH-VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA-QDGSVKLWSLDKDTP-L 234 (471)
Q Consensus 158 ~~~s~~~~~-l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~-~ 234 (471)
..|.+++.+ +++++.++.|.+||+.+++....+..+...+ +++|+|++. .+++++ .++.|.+||+.+++. .
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~-----~l~~~~~~~~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCS-----NVVVTSDFCQTLVQIETQLEPPKV 76 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSC-----EEEEEESTTCEEEEEECSSSSCEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCC-----EEEEEeCCCCeEEEEECCCCceeE
Confidence 346666666 5677788999999999999988888776777 999999998 455554 489999999998887 5
Q ss_pred eeecCCCCcceEEEEECCCCCEEEEEeCCC---eEEeccc-----cccccCCCCcceEEEEECCCCCEEEEE-ecCCe-E
Q psy11350 235 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDH---SWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLGTC-CWDHS-W 304 (471)
Q Consensus 235 ~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~---~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~-i 304 (471)
..+..+.. ...+++|+|+|++++++..++ .+.++.. ...+.. .....+++|+|+|++++++ ..++. |
T Consensus 77 ~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 77 VAIQEGQS-SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp EEEEECSS-CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred EecccCCC-CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceE
Confidence 55554443 444499999999999655552 5554322 122222 2357899999999866655 45578 9
Q ss_pred EEEECCCCcEE----EEeeCCCCCeEEEEEeCCCCEEEE-EeCCCeEEEEeCCCCee---EEEecccCcCEEEEEEcCCC
Q psy11350 305 RLWDLNQGQEV----LHQEGHGKPVYCMSFQGDGSVVAT-GGLDAFGRVWDLRTGRC---IMFLEGHLKSVFSVDFSPDG 376 (471)
Q Consensus 305 ~iwd~~~~~~~----~~~~~~~~~v~~~~~s~d~~~l~t-~~~dg~i~iwd~~~~~~---~~~~~~h~~~v~~~~~sp~~ 376 (471)
.+|++.....+ ............++|+|+|+++++ +..++.|++||+.+++. +..+..+ ..+..++|+|+|
T Consensus 154 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg 232 (331)
T 3u4y_A 154 RRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDG 232 (331)
T ss_dssp EEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTS
T ss_pred EEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCC
Confidence 99998764333 222244566899999999996554 45689999999999887 7777643 677899999999
Q ss_pred CEEEEEe-CCCcEEEEECCCccc
Q psy11350 377 YHLATGS-EDNAVKIWDLRKRRL 398 (471)
Q Consensus 377 ~~l~s~s-~dg~i~iwd~~~~~~ 398 (471)
++|+.++ .++.|.+||+.+++.
T Consensus 233 ~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 233 STVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp SEEEEECSSEEEEEEEETTTTEE
T ss_pred CEEEEEEcCCCEEEEEECCCCce
Confidence 9776654 578899999999887
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=6.2e-22 Score=187.88 Aligned_cols=239 Identities=11% Similarity=0.026 Sum_probs=182.9
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCC-CCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCccee
Q psy11350 157 YCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHD-CNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLA 235 (471)
Q Consensus 157 ~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 235 (471)
.+++++++.++++++.++.|++||+.+++.+..+..+. ..+..++|+|++.. +++++..++.|.+||+.+++.+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~----~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRT----AYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSE----EEEEETTTTEEEEEETTTTEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCE----EEEEeCCCCcEEEEeCCCCcEEE
Confidence 34678889999999999999999999999888887543 25679999999872 44566678999999999988777
Q ss_pred eecCCC-----CcceEEEEECCCCCEEEEEeCC------------CeEEeccccc-----cc-cCCCCcceEEEEECCCC
Q psy11350 236 NLEGHE-----PFRVSRIKFHPSGRFLGTCCWD------------HSWRLDTPLA-----NL-EGHEPFRVSRIKFHPSG 292 (471)
Q Consensus 236 ~~~~~~-----~~~v~~~~~s~~~~~i~~~~~d------------~~~~~~~~~~-----~~-~~~~~~~v~~l~~~~~~ 292 (471)
.+.... ...+..++|+|+|+++++++.+ +.+.++.... .+ .......+.+++|+|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 665432 2247889999999999998865 5544432211 11 11123358889999999
Q ss_pred CEEEEEecCCeEEEEECCCCcEEEEeeCCC--------------------------------------------------
Q psy11350 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHG-------------------------------------------------- 322 (471)
Q Consensus 293 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------------------------------------------------- 322 (471)
+ +++++ +.|.+||+.+++.+..+..+.
T Consensus 160 ~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 160 S-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp C-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred c-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 9 55554 449999999888766554321
Q ss_pred ------------------CCeEEEEEeC-CCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEe
Q psy11350 323 ------------------KPVYCMSFQG-DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383 (471)
Q Consensus 323 ------------------~~v~~~~~s~-d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s 383 (471)
..+.+++|+| ++++++++ ++.|.+||+.+++.+..+.. ...+.+++|+|+|++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEES
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEec
Confidence 1345677889 99999888 88999999999998877763 34578999999999888888
Q ss_pred CCCcEEEEECCCccchheeccc
Q psy11350 384 EDNAVKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 384 ~dg~i~iwd~~~~~~~~~~~~~ 405 (471)
.++.|.+||+.+++.+..+...
T Consensus 314 ~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 314 TFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp BSSEEEEEETTTTEEEEEEECS
T ss_pred CCCeEEEEeccccceeeeeecC
Confidence 8999999999999988877543
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=1.6e-21 Score=184.00 Aligned_cols=230 Identities=13% Similarity=0.075 Sum_probs=178.6
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEeecCCC--CEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCC
Q psy11350 165 QHVATASWSGLCKLWTVPECELVQTFRGHDC--NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP 242 (471)
Q Consensus 165 ~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 242 (471)
++|++++.++.|.+||+.+++.+..+..... .+..++|+|++.. ++++++.++.|.+||+.+++.+..+.....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~----l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRI----AYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSE----EEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCE----EEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 4789999999999999999998888764332 4789999999873 456667789999999999988776654321
Q ss_pred ----cceEEEEECCCCCEEEEEe------------CCCeEEeccc-----cccccCCCCcceEEEEECCCCCEEEEEecC
Q psy11350 243 ----FRVSRIKFHPSGRFLGTCC------------WDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301 (471)
Q Consensus 243 ----~~v~~~~~s~~~~~i~~~~------------~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 301 (471)
..+..++|+|+|++++++. .++.+.++.. ...+.. ...+.+++|+|++++|+++ +
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~--~ 153 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGL--G 153 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEE--S
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEe--C
Confidence 1467899999999998886 4566544322 112221 2357789999999988888 6
Q ss_pred CeEEEEECCCCcEEEEeeCCC-----------------------------------------------------------
Q psy11350 302 HSWRLWDLNQGQEVLHQEGHG----------------------------------------------------------- 322 (471)
Q Consensus 302 g~i~iwd~~~~~~~~~~~~~~----------------------------------------------------------- 322 (471)
+.|.+||+.+++.+..+..+.
T Consensus 154 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 233 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM 233 (337)
T ss_dssp SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceE
Confidence 889999998887665443221
Q ss_pred -------CCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 323 -------KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 323 -------~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
..+.+++|+|||++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|+|++|++++.++.|.+||+.+
T Consensus 234 ~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 234 REVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred eecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 234568999999999888 799999999999888777643 5678999999999999999999999999999
Q ss_pred ccchheeccc
Q psy11350 396 RRLLKWCTQL 405 (471)
Q Consensus 396 ~~~~~~~~~~ 405 (471)
++.+..+...
T Consensus 311 ~~~~~~~~~~ 320 (337)
T 1pby_B 311 LEKKGQVDLP 320 (337)
T ss_dssp CCEEEEEECG
T ss_pred CcEEEEEEcC
Confidence 9988877544
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=8.1e-22 Score=214.18 Aligned_cols=240 Identities=11% Similarity=0.095 Sum_probs=188.5
Q ss_pred eeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCC-CceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEE
Q psy11350 146 CSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE-CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 146 ~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 224 (471)
..+.+|...+.++.|+++ .++++++.+|.+.||.+.. +.....+..|. .+..++|+|++. .|+.+ .++.|.
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~-----~la~~-~~~~i~ 268 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGR-----RILFS-KGGSIY 268 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSS-----CEEEE-ETTEEE
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCC-----EEEEE-eCCEEE
Confidence 344789999999999998 6677888889999998653 44555666665 456789999998 46666 589999
Q ss_pred EEeCCCCcceeeecCCC----------CcceEEEEEC-CCCCEEEEEeCCCeEEecc----ccccccCCCCcceEEEEEC
Q psy11350 225 LWSLDKDTPLANLEGHE----------PFRVSRIKFH-PSGRFLGTCCWDHSWRLDT----PLANLEGHEPFRVSRIKFH 289 (471)
Q Consensus 225 iwd~~~~~~~~~~~~~~----------~~~v~~~~~s-~~~~~i~~~~~d~~~~~~~----~~~~~~~~~~~~v~~l~~~ 289 (471)
+|++.. ..+..+..+. ...+.+++|+ |+|+++++++ ++.+.++. ....+..+....+..++|+
T Consensus 269 ~~d~~~-~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s 346 (1045)
T 1k32_A 269 IFNPDT-EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD 346 (1045)
T ss_dssp EECTTT-CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS
T ss_pred EecCCc-eEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc
Confidence 999944 3344444421 1258899999 9999999988 44433321 1223344423278999999
Q ss_pred CCCCEEEEEecCCeEE-EEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEE
Q psy11350 290 PSGRFLGTCCWDHSWR-LWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVF 368 (471)
Q Consensus 290 ~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 368 (471)
+|+.|++++.++.+. +||+.+++... +.+|...+.+++|+|||++|++++.++.|++||+.+++....+.+|...+.
T Consensus 347 -dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~ 424 (1045)
T 1k32_A 347 -TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMIT 424 (1045)
T ss_dssp -SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCC
T ss_pred -CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCcc
Confidence 999999999888899 99998876544 447888999999999999999999999999999999988877778999999
Q ss_pred EEEEcCCCCEEEEEeCCC----------cEEEEECCCcc
Q psy11350 369 SVDFSPDGYHLATGSEDN----------AVKIWDLRKRR 397 (471)
Q Consensus 369 ~~~~sp~~~~l~s~s~dg----------~i~iwd~~~~~ 397 (471)
+++|+|||++|++++.++ .|++||+.+++
T Consensus 425 ~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 425 DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp CEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred ceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 999999999999887654 89999999877
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=5.3e-21 Score=180.87 Aligned_cols=287 Identities=13% Similarity=0.104 Sum_probs=183.1
Q ss_pred CEEE-EEeCCCcEEEEeCC-CCc--eEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCC-CcEEEEeCC--CCcc--ee
Q psy11350 165 QHVA-TASWSGLCKLWTVP-ECE--LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD-GSVKLWSLD--KDTP--LA 235 (471)
Q Consensus 165 ~~l~-tg~~dg~i~iwd~~-~~~--~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d-g~i~iwd~~--~~~~--~~ 235 (471)
++|+ +++.++.|++|++. +++ .+.. ..|...+.+++|+|++. +|++++.+ +.|.+|++. ++.. +.
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~-----~l~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKR-----YLYVGVRPEFRVLAYRIAPDDGALTFAA 78 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSS-----EEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCC-----EEEEeecCCCeEEEEEecCCCCceeecc
Confidence 3444 44779999999985 342 3333 34677889999999998 67777776 999999987 5543 33
Q ss_pred eecCCCCcceEEEEECCCCCEEEEEeC-CCeEEeccc--------cccccCCCCcceEEEEECCCCCEEEEEe-cCCeEE
Q psy11350 236 NLEGHEPFRVSRIKFHPSGRFLGTCCW-DHSWRLDTP--------LANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHSWR 305 (471)
Q Consensus 236 ~~~~~~~~~v~~~~~s~~~~~i~~~~~-d~~~~~~~~--------~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~ 305 (471)
.+.... .+..++|+|+|+++++++. ++.+.++.. ...+.. ...+.+++|+|+++++++++ .++.|.
T Consensus 79 ~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 79 ESALPG--SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG--LDGCHSANISPDNRTLWVPALKQDRIC 154 (343)
T ss_dssp EEECSS--CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC--CTTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred ccccCC--CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC--CCCceEEEECCCCCEEEEecCCCCEEE
Confidence 444333 6889999999998877765 665544332 111222 23588899999999888887 899999
Q ss_pred EEECCC-CcEEE----EeeC-CCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCC--Cee--EEEec----cc--CcCEE
Q psy11350 306 LWDLNQ-GQEVL----HQEG-HGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRT--GRC--IMFLE----GH--LKSVF 368 (471)
Q Consensus 306 iwd~~~-~~~~~----~~~~-~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~--~~~--~~~~~----~h--~~~v~ 368 (471)
+||+.+ ++... .... ....+.+++|+|+++++++++ .++.|.+|++.. ++. ...+. ++ ...+.
T Consensus 155 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 234 (343)
T 1ri6_A 155 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAA 234 (343)
T ss_dssp EEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEE
T ss_pred EEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCcc
Confidence 999987 54432 2222 345788999999999766554 889999999953 432 22222 11 23577
Q ss_pred EEEEcCCCCEEE-EEeCCCcEEEEECC--C--ccchheecccCCCccceeeccccceeeeecccCCCcccccch--h--h
Q psy11350 369 SVDFSPDGYHLA-TGSEDNAVKIWDLR--K--RRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISS--A--L 439 (471)
Q Consensus 369 ~~~~sp~~~~l~-s~s~dg~i~iwd~~--~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~--~--~ 439 (471)
+++|+|+|++|+ ++..++.|.+||+. + .+.+..+... .....+++..+....+......+...++.- . .
T Consensus 235 ~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 235 DIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE--TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS--SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred ceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC--CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCce
Confidence 899999998877 45578999999998 2 2333333322 123334445555443333333333333311 1 1
Q ss_pred hcccccceeeecccceeeeecCCe
Q psy11350 440 KEQVEPIPLLLDIQKLTFKFDSDL 463 (471)
Q Consensus 440 ~~~~~~~~~~~~~~~l~fs~dg~~ 463 (471)
...+..++.......++|.|+.+.
T Consensus 313 ~~~~~~~~~g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 313 LHEKGRYAVGQGPMWVVVNAHEGG 336 (343)
T ss_dssp EEEEEEEECSSSCCEEEEEEEC--
T ss_pred eeEccccccCCCCeeEEEEcccCC
Confidence 122333344345677888876543
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=3.2e-21 Score=183.27 Aligned_cols=246 Identities=10% Similarity=0.098 Sum_probs=172.6
Q ss_pred ecCCcCeEEEEEecCCCEEEEEeC---CCcEEEEeCCCCc--eEEEeecCCCCEEEEEEeeCCCCCCccEEEEEe-CCCc
Q psy11350 149 VGDTRPISYCSFSPDSQHVATASW---SGLCKLWTVPECE--LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA-QDGS 222 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~~l~tg~~---dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~-~dg~ 222 (471)
..+...+..++|+|||+ |++++. ++.|++|++.+++ .+..+..+...+..++|+|++. +|++++ .++.
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~-----~l~~~~~~~~~ 109 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQ-----LVYSANYHKGT 109 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTT-----EEEEEETTTTE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCC-----EEEEEeCCCCE
Confidence 34556778899999999 655554 6899999997765 3444455677788999999998 577776 7899
Q ss_pred EEEEeCCC-Cc--ceeeecCC--------CCcceEEEEECCCCCEEEEEeCCCeEEecccc-----c---cccCCCCcce
Q psy11350 223 VKLWSLDK-DT--PLANLEGH--------EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL-----A---NLEGHEPFRV 283 (471)
Q Consensus 223 i~iwd~~~-~~--~~~~~~~~--------~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~-----~---~~~~~~~~~v 283 (471)
|.+|++.. +. .+..+... ....+.+++|+|+|+.+++...++.+.++... . .+.......+
T Consensus 110 v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p 189 (347)
T 3hfq_A 110 AEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGP 189 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCE
T ss_pred EEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCC
Confidence 99999863 22 22333221 11248899999999955555556665443221 1 1122223357
Q ss_pred EEEEECCCCCEEEEE-ecCCeEEEEECCC--CcE--EEEeeCCC------CCeEEEEEeCCCCEE-EEEeCCCeEEEEeC
Q psy11350 284 SRIKFHPSGRFLGTC-CWDHSWRLWDLNQ--GQE--VLHQEGHG------KPVYCMSFQGDGSVV-ATGGLDAFGRVWDL 351 (471)
Q Consensus 284 ~~l~~~~~~~~l~~~-~~dg~i~iwd~~~--~~~--~~~~~~~~------~~v~~~~~s~d~~~l-~t~~~dg~i~iwd~ 351 (471)
..++|+|+|++++++ ..++.|.+|++.. ++. +..+.... ..+..++|+|||++| +++..++.|.+|++
T Consensus 190 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 190 RHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 889999999976664 5678999999874 443 22332222 458899999999977 45566899999999
Q ss_pred CC---CeeEEEecccCcCEEEEEEcCCCCEEEEEeCC-CcEEEE--ECCCccchh
Q psy11350 352 RT---GRCIMFLEGHLKSVFSVDFSPDGYHLATGSED-NAVKIW--DLRKRRLLK 400 (471)
Q Consensus 352 ~~---~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d-g~i~iw--d~~~~~~~~ 400 (471)
.. .+.+..+..+...+.+++|+|+|++|++++.+ +.|.+| |..++++..
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 270 TADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp CGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 72 35566666666778999999999988888765 899999 555666543
No 147
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=1.7e-22 Score=197.61 Aligned_cols=212 Identities=12% Similarity=0.061 Sum_probs=157.3
Q ss_pred CCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCC----------ceEEE-----eecCCCCEEEEEEeeCCCCCCccEEE
Q psy11350 151 DTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC----------ELVQT-----FRGHDCNVGAIEFHPLPSEGAVCSLA 215 (471)
Q Consensus 151 h~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~----------~~~~~-----~~~h~~~v~~l~~~~~~~~~~~~~l~ 215 (471)
+...++.+++++++.+|++++.+| ++||+.... ..+.. ...|...|.+++|+|++. +|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-----~la 108 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL-----TLS 108 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC-----EEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC-----EEE
Confidence 345688999999999999999888 888875311 11111 123567899999999998 677
Q ss_pred ----EEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCC
Q psy11350 216 ----SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPS 291 (471)
Q Consensus 216 ----s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 291 (471)
+++.|+.|+|||+.++..... .... .+ .....+.+| ...|.+++|+|+
T Consensus 109 v~~~sgs~d~~v~iwd~~~~~~~~~-~~~~--~~------------------------~~~~~~~~h-~~~V~~v~~~p~ 160 (434)
T 2oit_A 109 ACMMSSEYGSIIAFFDVRTFSNEAK-QQKR--PF------------------------AYHKLLKDA-GGMVIDMKWNPT 160 (434)
T ss_dssp EEEEETTTEEEEEEEEHHHHHCTTC-SSCC--CS------------------------EEEECCCSG-GGSEEEEEECSS
T ss_pred EEEeccCCCceEEEEEccccccCCc-CCcc--ee------------------------eeeeccCCC-CCceEEEEECCC
Confidence 788899999999865410000 0000 00 001122333 457999999997
Q ss_pred -CCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEeccc-------
Q psy11350 292 -GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH------- 363 (471)
Q Consensus 292 -~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h------- 363 (471)
+.+|++++.||+|++||++++..+....+|...|++++|+|+|++|++|+.||.|++||++ ++....+..|
T Consensus 161 ~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~ 239 (434)
T 2oit_A 161 VPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDH 239 (434)
T ss_dssp CTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTS
T ss_pred CCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCC
Confidence 7899999999999999999987777778899999999999999999999999999999998 6555555443
Q ss_pred CcCEEEEEEcCCCCEEEEE-eCCCc------EEEEECCCcc
Q psy11350 364 LKSVFSVDFSPDGYHLATG-SEDNA------VKIWDLRKRR 397 (471)
Q Consensus 364 ~~~v~~~~~sp~~~~l~s~-s~dg~------i~iwd~~~~~ 397 (471)
...|.+++|++++.++++. +.||. +++|++++.+
T Consensus 240 ~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 240 PVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred ceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 2389999999988777543 34433 8999998653
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=2e-21 Score=203.80 Aligned_cols=242 Identities=12% Similarity=0.096 Sum_probs=180.9
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc--eEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECE--LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK 230 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 230 (471)
..|.+++|||||++|++++. +.|++||+.++. ....+..|...+.+++|+|++. .|+.++ ++.|.+||+.+
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~-----~la~~~-~~~i~~~d~~~ 181 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGG-----FVSFIR-GRNLWVIDLAS 181 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSS-----EEEEEE-TTEEEEEETTT
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCC-----EEEEEe-CCcEEEEecCC
Confidence 45788999999999999985 999999998873 4455677888999999999998 677776 57999999988
Q ss_pred CcceeeecCCCCc---------------ceEEEEECCCCCEEEEEeCCC-------------------------------
Q psy11350 231 DTPLANLEGHEPF---------------RVSRIKFHPSGRFLGTCCWDH------------------------------- 264 (471)
Q Consensus 231 ~~~~~~~~~~~~~---------------~v~~~~~s~~~~~i~~~~~d~------------------------------- 264 (471)
++.......+... .+..+.|+|||++|++++.++
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 7765544433221 147899999999999987664
Q ss_pred --eEEecc----cc-cccc-C-CCCcceEEEEECCCCCEEEEEec-----CCeEEEEECCCCcEEEEeeCCCC----CeE
Q psy11350 265 --SWRLDT----PL-ANLE-G-HEPFRVSRIKFHPSGRFLGTCCW-----DHSWRLWDLNQGQEVLHQEGHGK----PVY 326 (471)
Q Consensus 265 --~~~~~~----~~-~~~~-~-~~~~~v~~l~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~----~v~ 326 (471)
.+.++. .. ..+. . .....+..++| |||++|++++. +..|++||+.+++....+..+.. .+.
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence 222221 11 1111 1 12456899999 99999997764 56899999999987766655543 456
Q ss_pred EEEEeCCCCEEEEEeCCCeEEEEeCC-CCeeEEEecccCcCEEEE-EEcCCCCEEEE-EeCCC--cEEEEECCC-ccchh
Q psy11350 327 CMSFQGDGSVVATGGLDAFGRVWDLR-TGRCIMFLEGHLKSVFSV-DFSPDGYHLAT-GSEDN--AVKIWDLRK-RRLLK 400 (471)
Q Consensus 327 ~~~~s~d~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~~-~~sp~~~~l~s-~s~dg--~i~iwd~~~-~~~~~ 400 (471)
+++|+|||+++++++.+|.++||.+. .+. ...+..|...|..+ .|+|+|+.|+. ++.++ .++||++.. ++.+.
T Consensus 341 ~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~ 419 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQ 419 (741)
T ss_dssp CCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCE
T ss_pred ceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCee
Confidence 88999999999999999987777665 345 77788888889887 59999987754 45555 899999864 55444
Q ss_pred eec
Q psy11350 401 WCT 403 (471)
Q Consensus 401 ~~~ 403 (471)
.+.
T Consensus 420 ~l~ 422 (741)
T 2ecf_A 420 RLS 422 (741)
T ss_dssp ECC
T ss_pred ecc
Confidence 444
No 149
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=7.6e-22 Score=206.33 Aligned_cols=232 Identities=12% Similarity=0.084 Sum_probs=167.2
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCC---CEEEEEEeeCCCCCCccEEEEEeC---------CCcEE
Q psy11350 157 YCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDC---NVGAIEFHPLPSEGAVCSLASCAQ---------DGSVK 224 (471)
Q Consensus 157 ~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~~~~~l~s~~~---------dg~i~ 224 (471)
+++|+|||++++++ .|+.|++||+.+++....+.+|.. .+.+++|+|++. .|++++. ++.|+
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~-----~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQ-----FVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSS-----EEEEEEEEEECSSSCEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCC-----eEEEEecCceeEEeecceEEE
Confidence 66899999655554 699999999999998877766543 488999999998 6777765 78999
Q ss_pred EEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc----ccc--cCCCC----------------cc
Q psy11350 225 LWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL----ANL--EGHEP----------------FR 282 (471)
Q Consensus 225 iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~----~~~--~~~~~----------------~~ 282 (471)
+||+.+++.+...... ..+..++|||||+.|+++. ++.+.++... ..+ .++.. ..
T Consensus 94 ~~d~~~g~~~~~~~l~--~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~ 170 (719)
T 1z68_A 94 IYDLSNGEFVRGNELP--RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLAT 170 (719)
T ss_dssp EEETTTTEECCSSCCC--SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCS
T ss_pred EEECCCCccccceecC--cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccC
Confidence 9999988763211111 2688899999999999986 4555443221 111 11111 11
Q ss_pred eEEEEECCCCCEEEEEecCC----------------------------------eEEEEECCCCcEE---E-----EeeC
Q psy11350 283 VSRIKFHPSGRFLGTCCWDH----------------------------------SWRLWDLNQGQEV---L-----HQEG 320 (471)
Q Consensus 283 v~~l~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~---~-----~~~~ 320 (471)
..+++|+|||++|++++.|. .|++||+.+++.. . .+.+
T Consensus 171 ~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 250 (719)
T 1z68_A 171 KYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIAS 250 (719)
T ss_dssp SCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHT
T ss_pred cccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCC
Confidence 24899999999999988652 7899999987642 1 1346
Q ss_pred CCCCeEEEEEeCCCCEEEEEeCC----CeEEEEe----CCCCeeEEEe----cccCcCEE-----EEEEcCCCCEEEE--
Q psy11350 321 HGKPVYCMSFQGDGSVVATGGLD----AFGRVWD----LRTGRCIMFL----EGHLKSVF-----SVDFSPDGYHLAT-- 381 (471)
Q Consensus 321 ~~~~v~~~~~s~d~~~l~t~~~d----g~i~iwd----~~~~~~~~~~----~~h~~~v~-----~~~~sp~~~~l~s-- 381 (471)
|...+.+++|+||++++++.... ..|++|| +.++++...+ .+|...+. .+.|+|||+.|+.
T Consensus 251 ~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 330 (719)
T 1z68_A 251 SDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIF 330 (719)
T ss_dssp SCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEE
T ss_pred CcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEE
Confidence 78889999999998877774432 2488999 8887765555 36766676 8899999986544
Q ss_pred EeCCC--cEEEEECCCcc
Q psy11350 382 GSEDN--AVKIWDLRKRR 397 (471)
Q Consensus 382 ~s~dg--~i~iwd~~~~~ 397 (471)
+..+| .|.+||+..++
T Consensus 331 ~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 331 SDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp ECTTSCEEEEEESSCSTT
T ss_pred EccCCceEEEEEECCCCc
Confidence 44555 47777887766
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=1.3e-19 Score=173.11 Aligned_cols=242 Identities=12% Similarity=0.119 Sum_probs=168.4
Q ss_pred CCcCeEEEEEecCCCEEEEEeCC----CcEEEEeCCC--Cce--EEEeecCCCCEEEEEEeeCCCCCCccEEEEEe-CCC
Q psy11350 151 DTRPISYCSFSPDSQHVATASWS----GLCKLWTVPE--CEL--VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA-QDG 221 (471)
Q Consensus 151 h~~~V~~~~~s~~~~~l~tg~~d----g~i~iwd~~~--~~~--~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~-~dg 221 (471)
|...+..++|+|||++|++++.+ +.|.+|++.. ++. +.....+......+++ ++. .|++++ .++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~-----~l~~~~~~~~ 120 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGK-----NIVTANYSGG 120 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSS-----EEEEEETTTT
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCC-----EEEEEECCCC
Confidence 66778889999999999999875 7999998864 433 3344445566777887 555 455554 688
Q ss_pred cEEEEeCCCCcceeee------cCC-------CCcceEEEEECCCCCEEEEEeC-CCeEEec---ccc------------
Q psy11350 222 SVKLWSLDKDTPLANL------EGH-------EPFRVSRIKFHPSGRFLGTCCW-DHSWRLD---TPL------------ 272 (471)
Q Consensus 222 ~i~iwd~~~~~~~~~~------~~~-------~~~~v~~~~~s~~~~~i~~~~~-d~~~~~~---~~~------------ 272 (471)
.|.+|++.....+..+ .+. ....+.+++|+|+|+++++++. ++.+.++ ...
T Consensus 121 ~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~ 200 (361)
T 3scy_A 121 SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG 200 (361)
T ss_dssp EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE
T ss_pred EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc
Confidence 9999999754433221 111 1124588999999997776664 5554443 111
Q ss_pred --ccccCCCCcceEEEEECCCCCEEEEEe-cCCeEEEEECCCCcE--EEEe---eCCCCCeEEEEEeCCCCEEEEEeCC-
Q psy11350 273 --ANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHSWRLWDLNQGQE--VLHQ---EGHGKPVYCMSFQGDGSVVATGGLD- 343 (471)
Q Consensus 273 --~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~iwd~~~~~~--~~~~---~~~~~~v~~~~~s~d~~~l~t~~~d- 343 (471)
..........+..++|+|+|+++++++ .++.|.+||+.+++. +..+ ..+.....+++|+|||++|+++..+
T Consensus 201 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~ 280 (361)
T 3scy_A 201 TPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK 280 (361)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS
T ss_pred cccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC
Confidence 111222244578999999999888877 689999999987754 2222 2334557899999999988776654
Q ss_pred -CeEEEEeCC--CCe--eEEEecccCcCEEEEEEcCCCCEEEEEe-CCCcEEEEE--CCCccchh
Q psy11350 344 -AFGRVWDLR--TGR--CIMFLEGHLKSVFSVDFSPDGYHLATGS-EDNAVKIWD--LRKRRLLK 400 (471)
Q Consensus 344 -g~i~iwd~~--~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s~s-~dg~i~iwd--~~~~~~~~ 400 (471)
+.|.+|++. +++ .+..+.. ...+.+++|+|+|++|++++ .++.|.+|+ ..++++..
T Consensus 281 ~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 281 ADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp SCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 899999986 444 4444444 45788999999999888887 678999964 45666544
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=2.3e-20 Score=194.64 Aligned_cols=238 Identities=14% Similarity=0.136 Sum_probs=174.8
Q ss_pred CCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC
Q psy11350 151 DTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK 230 (471)
Q Consensus 151 h~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 230 (471)
+...|.+++|||| .+++.+. ++.|++||+.+++... +..+...+.+++|+|++. .|++ +.++.|.+||+.+
T Consensus 80 ~~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~-----~la~-~~~~~i~v~~~~~ 150 (706)
T 2z3z_A 80 DAFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGD-----RVAY-VRNHNLYIARGGK 150 (706)
T ss_dssp --CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSS-----EEEE-EETTEEEEEECBC
T ss_pred cccCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCC-----EEEE-EECCeEEEEecCc
Confidence 3467999999999 6666665 6999999998876654 445677788999999998 5777 4689999999988
Q ss_pred -----CcceeeecCCCCc-------------ceEEEEECCCCCEEEEEeCC-----------------------------
Q psy11350 231 -----DTPLANLEGHEPF-------------RVSRIKFHPSGRFLGTCCWD----------------------------- 263 (471)
Q Consensus 231 -----~~~~~~~~~~~~~-------------~v~~~~~s~~~~~i~~~~~d----------------------------- 263 (471)
++.......+... .+.++.|+|||++|++++.|
T Consensus 151 ~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 151 LGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp TTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred ccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 7765544433321 14889999999999998732
Q ss_pred ----CeEEecc---cc-cccc-C-CCCcceEEEEECCCCCEEEEEecCC-----eEEEEECCCCcEEEEee--CCC---C
Q psy11350 264 ----HSWRLDT---PL-ANLE-G-HEPFRVSRIKFHPSGRFLGTCCWDH-----SWRLWDLNQGQEVLHQE--GHG---K 323 (471)
Q Consensus 264 ----~~~~~~~---~~-~~~~-~-~~~~~v~~l~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~--~~~---~ 323 (471)
..+.++. .. ..+. . .....+.+++|+|+|++|++++.++ .|++||+.+++....+. .+. .
T Consensus 231 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 2233321 11 1111 1 2245689999999999999988775 89999999984333332 222 2
Q ss_pred CeEEEEEeC--CCCEEEEEeCCCeEEEEeCC-CCeeEEEecccCcCEEE-EEEcCCCCEEEEEeC-CC----cEEEEECC
Q psy11350 324 PVYCMSFQG--DGSVVATGGLDAFGRVWDLR-TGRCIMFLEGHLKSVFS-VDFSPDGYHLATGSE-DN----AVKIWDLR 394 (471)
Q Consensus 324 ~v~~~~~s~--d~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~-~~~sp~~~~l~s~s~-dg----~i~iwd~~ 394 (471)
.+.+++|+| ||+++++++.++.++||.+. ++..+..+..|...+.. ++|+|+|+.|+.++. ++ .|..||+.
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 346789999 99999999999999999876 67777888888888887 799999988766554 44 67777877
Q ss_pred Ccc
Q psy11350 395 KRR 397 (471)
Q Consensus 395 ~~~ 397 (471)
+++
T Consensus 391 ~~~ 393 (706)
T 2z3z_A 391 GGK 393 (706)
T ss_dssp CCC
T ss_pred CCC
Confidence 765
No 152
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=2.9e-20 Score=194.38 Aligned_cols=270 Identities=12% Similarity=0.030 Sum_probs=181.6
Q ss_pred eecCCc---CeEEEEEecCCCEEEEEeCC---------CcEEEEeCCCCceEEEee---cCCCCEEEEEEeeCCCCCCcc
Q psy11350 148 QVGDTR---PISYCSFSPDSQHVATASWS---------GLCKLWTVPECELVQTFR---GHDCNVGAIEFHPLPSEGAVC 212 (471)
Q Consensus 148 ~~gh~~---~V~~~~~s~~~~~l~tg~~d---------g~i~iwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~~~~~ 212 (471)
+.+|.. .|.+++|||||++|++++.+ +.|++||+.+++. ..+. +|...+..++|+|++.
T Consensus 53 ~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~----- 126 (723)
T 1xfd_A 53 IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQ----- 126 (723)
T ss_dssp ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTT-----
T ss_pred eccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCC-----
Confidence 345554 49999999999999999864 7889999998876 3333 3444588999999998
Q ss_pred EEEEEeCCCcEEEEeCCCCcceeeecCCCCc-----------------ceEEEEECCCCCEEEEEeCCC-----------
Q psy11350 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPF-----------------RVSRIKFHPSGRFLGTCCWDH----------- 264 (471)
Q Consensus 213 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----------------~v~~~~~s~~~~~i~~~~~d~----------- 264 (471)
.|+.++. +.|.+||+.+++.......+... .+.+++|+|||++|++++.++
T Consensus 127 ~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~ 205 (723)
T 1xfd_A 127 QLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTY 205 (723)
T ss_dssp CEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCC
T ss_pred EEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeecc
Confidence 5777775 89999999988776655543321 237899999999999987553
Q ss_pred -----------------------eEEecc---c--cccccCC-----CCcceEEEEECCCCCEEEEEec----CCeEEEE
Q psy11350 265 -----------------------SWRLDT---P--LANLEGH-----EPFRVSRIKFHPSGRFLGTCCW----DHSWRLW 307 (471)
Q Consensus 265 -----------------------~~~~~~---~--~~~~~~~-----~~~~v~~l~~~~~~~~l~~~~~----dg~i~iw 307 (471)
.+.++. . ...+..+ ....+..++|+|||++|++.+. +..|++|
T Consensus 206 ~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~ 285 (723)
T 1xfd_A 206 TGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLC 285 (723)
T ss_dssp SSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEE
T ss_pred CCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEE
Confidence 222221 1 1222222 1346889999999998877653 3579999
Q ss_pred ECCCCcEEEEeeC-CCCCe----EEEEEeCCCCEEEE--EeCCC------eEEEEe-CCCCe--eEEEecccCcCEEE-E
Q psy11350 308 DLNQGQEVLHQEG-HGKPV----YCMSFQGDGSVVAT--GGLDA------FGRVWD-LRTGR--CIMFLEGHLKSVFS-V 370 (471)
Q Consensus 308 d~~~~~~~~~~~~-~~~~v----~~~~~s~d~~~l~t--~~~dg------~i~iwd-~~~~~--~~~~~~~h~~~v~~-~ 370 (471)
|+.+++....+.. +...+ ..++|+|||+.|+. +..++ .|++|| ...+. +...+..+...+.. +
T Consensus 286 d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~ 365 (723)
T 1xfd_A 286 DATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKIL 365 (723)
T ss_dssp ETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEE
T ss_pred eCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeee
Confidence 9999887665543 33333 37899999996664 45666 577788 34444 14455544445554 6
Q ss_pred EEcCCCCEEEEEeCC---CcEEEEECCCcc--chheeccc--CCCccceeeccccceeeee
Q psy11350 371 DFSPDGYHLATGSED---NAVKIWDLRKRR--LLKWCTQL--LPNSIGVTSLLTDLYIDVL 424 (471)
Q Consensus 371 ~~sp~~~~l~s~s~d---g~i~iwd~~~~~--~~~~~~~~--~~~~~~~~~~~~d~~~~~~ 424 (471)
+|+|||+.|+..+.+ +.++||++.... ....+... ........+++.|....++
T Consensus 366 ~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 366 AYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp EEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred EEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEE
Confidence 999999999766655 789999986532 22223221 1223344555555544433
No 153
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=4.4e-19 Score=168.49 Aligned_cols=222 Identities=10% Similarity=-0.009 Sum_probs=171.3
Q ss_pred cCeEEEEEecCCCEEEEE-eCCCcEEEEeCCCCceEEEeecCCCC---------EEEEEEeeCCCCCCccEEEEEe--CC
Q psy11350 153 RPISYCSFSPDSQHVATA-SWSGLCKLWTVPECELVQTFRGHDCN---------VGAIEFHPLPSEGAVCSLASCA--QD 220 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg-~~dg~i~iwd~~~~~~~~~~~~h~~~---------v~~l~~~~~~~~~~~~~l~s~~--~d 220 (471)
..+.+++|+|+|++++++ ..++.|.+||+.+++.+..+..+... +.+++|+|++. .+++++ .+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-----~l~~~~~~~~ 163 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN-----TVYISGIGKE 163 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-----EEEEEEESSS
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC-----EEEEEecCCC
Confidence 346788999999976655 45799999999999998888765432 78999999988 455554 57
Q ss_pred CcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEec
Q psy11350 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW 300 (471)
Q Consensus 221 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 300 (471)
+.|.+||+.+++.+..+.... ..+.+++|+|+++++++++.
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~---------------------------------------~~~~~~~~s~dg~~l~~~~~ 204 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTG---------------------------------------KMSTGLALDSEGKRLYTTNA 204 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCC---------------------------------------TTCCCCEEETTTTEEEEECT
T ss_pred ceEEEEcCCCCceEEEecCCC---------------------------------------CccceEEECCCCCEEEEEcC
Confidence 899999999887766655222 13667899999999999999
Q ss_pred CCeEEEEECCCCcEEEEeeC----CCCCeEEEEEeCCCCEEEEEeC-CCeEEEEeCCCCeeEEEecccCcCEEEEEEcCC
Q psy11350 301 DHSWRLWDLNQGQEVLHQEG----HGKPVYCMSFQGDGSVVATGGL-DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD 375 (471)
Q Consensus 301 dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~s~d~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 375 (471)
++.|.+||+.+++.+..+.. +...+.+++|+|+++++++++. ++.|.+||+.+++.+..+..+. ..+++|+|+
T Consensus 205 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~d 282 (353)
T 3vgz_A 205 DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPA 282 (353)
T ss_dssp TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETT
T ss_pred CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCC
Confidence 99999999999988777654 5566889999999997776665 5899999999999887776543 367999999
Q ss_pred CCEEEEEe-CCCcEEEEECCCccchheecccCCCccceeeccccceee
Q psy11350 376 GYHLATGS-EDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYID 422 (471)
Q Consensus 376 ~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 422 (471)
|+++++++ .++.|.+||+.+++.+..+... .....+.+..|....
T Consensus 283 g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l 328 (353)
T 3vgz_A 283 RNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP--THPNSLALSADGKTL 328 (353)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEEECC--SEEEEEEECTTSCEE
T ss_pred CCEEEEEECCCCeEEEEECCCCeEEEEEecC--CCCCeEEEcCCCCEE
Confidence 99665555 6899999999999988766532 233344455555433
No 154
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=9.6e-20 Score=190.77 Aligned_cols=303 Identities=11% Similarity=0.108 Sum_probs=193.7
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCC-----EEEEEEeeCCCCCCccEEEEEeCC--------
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN-----VGAIEFHPLPSEGAVCSLASCAQD-------- 220 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~-----v~~l~~~~~~~~~~~~~l~s~~~d-------- 220 (471)
...+++|+|||++|+++ ||.|++||+.+++....+.+|... ...+.|+|++. .|+.++.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~-----~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQ-----FILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSS-----EEEEEEEEEECSSSCE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCC-----EEEEEECCeeeEEEcc
Confidence 35578999999999886 999999999999988888877643 23478999998 67777765
Q ss_pred -CcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc----ccccc--CCCC-------------
Q psy11350 221 -GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP----LANLE--GHEP------------- 280 (471)
Q Consensus 221 -g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~----~~~~~--~~~~------------- 280 (471)
+.+.+||+.+++... +..+.. .+...+|||||+.|+.+.. +.+.++.. ...+. ++..
T Consensus 91 ~~~~~~~d~~~~~~~~-l~~~~~-~~~~~~~SPdG~~la~~~~-~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~e 167 (740)
T 4a5s_A 91 TASYDIYDLNKRQLIT-EERIPN-NTQWVTWSPVGHKLAYVWN-NDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEE 167 (740)
T ss_dssp EEEEEEEETTTTEECC-SSCCCT-TEEEEEECSSTTCEEEEET-TEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHH
T ss_pred ceEEEEEECCCCcEEE-cccCCC-cceeeEECCCCCEEEEEEC-CeEEEEECCCCceEEEcCCCCccceecCcccccccc
Confidence 567799999887543 444333 7999999999999999865 44433221 11111 1111
Q ss_pred ---cceEEEEECCCCCEEEEEecCC------------------------------------eEEEEECCC---Cc--EEE
Q psy11350 281 ---FRVSRIKFHPSGRFLGTCCWDH------------------------------------SWRLWDLNQ---GQ--EVL 316 (471)
Q Consensus 281 ---~~v~~l~~~~~~~~l~~~~~dg------------------------------------~i~iwd~~~---~~--~~~ 316 (471)
.....+.|||||++|+.++.|. +|++||+.+ ++ ...
T Consensus 168 e~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~ 247 (740)
T 4a5s_A 168 EVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSI 247 (740)
T ss_dssp HTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEE
T ss_pred hhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEE
Confidence 1123589999999999875332 588899988 73 223
Q ss_pred Eee------CCCCCeEEEEEeCCCCEEEEEeC----CCeEEEEeCCCCe----eEE--Ee--cccCcCEE-----EEEEc
Q psy11350 317 HQE------GHGKPVYCMSFQGDGSVVATGGL----DAFGRVWDLRTGR----CIM--FL--EGHLKSVF-----SVDFS 373 (471)
Q Consensus 317 ~~~------~~~~~v~~~~~s~d~~~l~t~~~----dg~i~iwd~~~~~----~~~--~~--~~h~~~v~-----~~~~s 373 (471)
.+. +|...+..++|+|||++++.... +..|++||+.+++ +.. .+ .+|...|. .+.|+
T Consensus 248 ~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fs 327 (740)
T 4a5s_A 248 QITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFT 327 (740)
T ss_dssp EECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEEC
T ss_pred EecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEc
Confidence 333 37788999999999997665532 3479999999887 221 12 34555544 78899
Q ss_pred CCCCEEE-EEeC-C--CcEEEEECCCccchheecccCCCccceeeccccceeeeeccc---CCCcccccchhhhccc--c
Q psy11350 374 PDGYHLA-TGSE-D--NAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESL---NPGIGNIISSALKEQV--E 444 (471)
Q Consensus 374 p~~~~l~-s~s~-d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~~~~~~~~~~~~--~ 444 (471)
|||+.|+ ..+. + ..|.+||+..++..+ +....-....+..+. +..+.+.... ++....++........ .
T Consensus 328 pDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~~~d-~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~ 405 (740)
T 4a5s_A 328 LDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIEALT-SDYLYYISNEYKGMPGGRNLYKIQLIDYTKVT 405 (740)
T ss_dssp TTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEEEEC-SSEEEEEESCGGGCTTCBEEEEEETTEEEEEE
T ss_pred CCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEEEEe-CCEEEEEEecCCCCCceeEEEEEECCCCCcce
Confidence 9999877 6654 3 358889988765543 322211112222222 3334333332 1233334332222111 1
Q ss_pred ccee-----eecccceeeeecCCeEEEee
Q psy11350 445 PIPL-----LLDIQKLTFKFDSDLHAMVL 468 (471)
Q Consensus 445 ~~~~-----~~~~~~l~fs~dg~~lA~~~ 468 (471)
++.+ ........|||||++++...
T Consensus 406 ~lt~~~~~~~~~~~~~~~S~dg~~~~~~~ 434 (740)
T 4a5s_A 406 CLSCELNPERCQYYSVSFSKEAKYYQLRC 434 (740)
T ss_dssp ESSTTTSTTTBCBEEEEECTTSSEEEEEE
T ss_pred eeccccCCCCCceEEEEECCCCCEEEEEe
Confidence 2221 12456789999999887654
No 155
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=9.1e-20 Score=178.27 Aligned_cols=202 Identities=13% Similarity=0.109 Sum_probs=146.1
Q ss_pred ecCCcCeEEEEEecCCCEEE----EEeCCCcEEEEeCCCC--------c---eEEEeecCCCCEEEEEEeeCCCCCCccE
Q psy11350 149 VGDTRPISYCSFSPDSQHVA----TASWSGLCKLWTVPEC--------E---LVQTFRGHDCNVGAIEFHPLPSEGAVCS 213 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~~l~----tg~~dg~i~iwd~~~~--------~---~~~~~~~h~~~v~~l~~~~~~~~~~~~~ 213 (471)
..|...|.+++|+|+|++|+ +|+.|+.|+|||+.++ + ....+.+|...|.+++|+|+... +
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~----~ 164 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPS----M 164 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTT----E
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCC----E
Confidence 35778999999999999999 7888999999998654 2 24556679999999999998433 8
Q ss_pred EEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCC
Q psy11350 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGR 293 (471)
Q Consensus 214 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 293 (471)
|++++.||+|++||+.++........| ...|.+++|+|+|+
T Consensus 165 las~s~Dg~v~iwD~~~~~~~~~~~~~---------------------------------------~~~v~~v~wspdg~ 205 (434)
T 2oit_A 165 VAVCLADGSIAVLQVTETVKVCATLPS---------------------------------------TVAVTSVCWSPKGK 205 (434)
T ss_dssp EEEEETTSCEEEEEESSSEEEEEEECG---------------------------------------GGCEEEEEECTTSS
T ss_pred EEEEECCCeEEEEEcCCCcceeeccCC---------------------------------------CCceeEEEEcCCCC
Confidence 999999999999999877443333222 33699999999999
Q ss_pred EEEEEecCCeEEEEECCCCcEEEEeeCC-------CCCeEEEEEeCCCCEEEEE-eCCC------eEEEEeCCCCe----
Q psy11350 294 FLGTCCWDHSWRLWDLNQGQEVLHQEGH-------GKPVYCMSFQGDGSVVATG-GLDA------FGRVWDLRTGR---- 355 (471)
Q Consensus 294 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~s~d~~~l~t~-~~dg------~i~iwd~~~~~---- 355 (471)
+|++|+.||+|++||++ ++....+..| ...|.+++|++++.++++. +.+| .+++|+++..+
T Consensus 206 ~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~ 284 (434)
T 2oit_A 206 QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHP 284 (434)
T ss_dssp CEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCC
T ss_pred EEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCC
Confidence 99999999999999998 5555555443 2379999999988777553 3443 38999998652
Q ss_pred -eEEEec-------ccCcCEEEEEEcCCCCEEEEEe-CCCcEEEEECC
Q psy11350 356 -CIMFLE-------GHLKSVFSVDFSPDGYHLATGS-EDNAVKIWDLR 394 (471)
Q Consensus 356 -~~~~~~-------~h~~~v~~~~~sp~~~~l~s~s-~dg~i~iwd~~ 394 (471)
....+. +...+-..+.+.++.+++++++ ..+.|.|....
T Consensus 285 ~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 285 EIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp CEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred cceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 111111 1122233344446666665554 44556666643
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=2.7e-18 Score=163.00 Aligned_cols=224 Identities=12% Similarity=0.123 Sum_probs=148.2
Q ss_pred EEEEEeC----CCcEEEEeC--CCCceEE-EeecCCCCEEEEEEeeCCCCCCccEEEEEeC--CCcEEEEeCCCCcc--e
Q psy11350 166 HVATASW----SGLCKLWTV--PECELVQ-TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ--DGSVKLWSLDKDTP--L 234 (471)
Q Consensus 166 ~l~tg~~----dg~i~iwd~--~~~~~~~-~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~--~ 234 (471)
.|++|+. ++.|.+|.+ .+++... ....+...+..++|+|++. +++++.. ++.|.+|++.++.. +
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-----l~~~~~~~~~~~v~~~~~~~g~~~~~ 78 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-----LYSVDKEDDEGGIAAWQIDGQTAHKL 78 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-----EEEEEEETTEEEEEEEEEETTEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-----EEEEEecCCCceEEEEEecCCcEEEe
Confidence 4555543 455666665 4565443 2334456677899999886 3444432 68999999976653 3
Q ss_pred eeecCCCCcceEEEEECCCCCEEEEEe-CCCeEEecccc--------ccccCC--------CCcceEEEEECCCCCEEEE
Q psy11350 235 ANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHSWRLDTPL--------ANLEGH--------EPFRVSRIKFHPSGRFLGT 297 (471)
Q Consensus 235 ~~~~~~~~~~v~~~~~s~~~~~i~~~~-~d~~~~~~~~~--------~~~~~~--------~~~~v~~l~~~~~~~~l~~ 297 (471)
..+..+.. .+..++|+|+|+++++++ .++.+.++... ..+... ....+.+++|+|+|+++++
T Consensus 79 ~~~~~~~~-~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~ 157 (347)
T 3hfq_A 79 NTVVAPGT-PPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVI 157 (347)
T ss_dssp EEEEEESC-CCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEE
T ss_pred eeeecCCC-CCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEE
Confidence 33332332 678999999999988888 56665443221 111111 1124788999999996666
Q ss_pred EecCCeEEEEECC-CCcEEE--EeeC-CCCCeEEEEEeCCCCEEEE-EeCCCeEEEEeCCC--Cee--EEEecccC----
Q psy11350 298 CCWDHSWRLWDLN-QGQEVL--HQEG-HGKPVYCMSFQGDGSVVAT-GGLDAFGRVWDLRT--GRC--IMFLEGHL---- 364 (471)
Q Consensus 298 ~~~dg~i~iwd~~-~~~~~~--~~~~-~~~~v~~~~~s~d~~~l~t-~~~dg~i~iwd~~~--~~~--~~~~~~h~---- 364 (471)
...++.|.+||+. +++... .+.. ....+..++|+|||+++++ +..++.|.+|++.. ++. +..+....
T Consensus 158 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 237 (347)
T 3hfq_A 158 DLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYT 237 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCC
T ss_pred eCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCC
Confidence 6678899999998 454322 2222 2346788999999996655 56788999999874 543 22332222
Q ss_pred --cCEEEEEEcCCCCEE-EEEeCCCcEEEEECCC
Q psy11350 365 --KSVFSVDFSPDGYHL-ATGSEDNAVKIWDLRK 395 (471)
Q Consensus 365 --~~v~~~~~sp~~~~l-~s~s~dg~i~iwd~~~ 395 (471)
..+..++|+|||++| +++..++.|.+|++..
T Consensus 238 ~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 238 AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 358899999999987 5566789999999973
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=6.2e-19 Score=168.75 Aligned_cols=242 Identities=13% Similarity=0.150 Sum_probs=166.4
Q ss_pred CCcCeEEEEEecCCCEEEEEeCCCcEEEEeCC-CCceEEEeec-CCCCEEEEEEeeCCCCCCccEEEEEe----------
Q psy11350 151 DTRPISYCSFSPDSQHVATASWSGLCKLWTVP-ECELVQTFRG-HDCNVGAIEFHPLPSEGAVCSLASCA---------- 218 (471)
Q Consensus 151 h~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~-~~~~~~~~~~-h~~~v~~l~~~~~~~~~~~~~l~s~~---------- 218 (471)
+...+..++|+|+|++|++++.+ .|.+|++. +++....... ..+.+.+++|+|++.. .+++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~---l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRA---IFLLAAKQPPYAVYANP 113 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEE---EEEEECSSTTCCEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCE---EEEEEecCCcceeccce
Confidence 44568889999999999999877 99999997 7776543321 1123556889998861 0133442
Q ss_pred ---CCCcEEEEeCC-CCcceeeecC---CCCcceEEEEECCCCCEEEEEeC-CCeEEecccc--------ccccCC-CCc
Q psy11350 219 ---QDGSVKLWSLD-KDTPLANLEG---HEPFRVSRIKFHPSGRFLGTCCW-DHSWRLDTPL--------ANLEGH-EPF 281 (471)
Q Consensus 219 ---~dg~i~iwd~~-~~~~~~~~~~---~~~~~v~~~~~s~~~~~i~~~~~-d~~~~~~~~~--------~~~~~~-~~~ 281 (471)
.+|++.+|++. .++....+.. .....+.+++|+|+|++++++.. ++.+.++... ..+... ...
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred eecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 68999999997 4554433321 22337899999999998887764 3444432211 111111 134
Q ss_pred ceEEEEECCCCCEEEEEec-CCeEEEEECC--CCcEEE---Eee-------CCCC------CeEEEE-EeCCCCEEEEEe
Q psy11350 282 RVSRIKFHPSGRFLGTCCW-DHSWRLWDLN--QGQEVL---HQE-------GHGK------PVYCMS-FQGDGSVVATGG 341 (471)
Q Consensus 282 ~v~~l~~~~~~~~l~~~~~-dg~i~iwd~~--~~~~~~---~~~-------~~~~------~v~~~~-~s~d~~~l~t~~ 341 (471)
.+..++|+|+|+++++++. ++.|.+|++. +++... .+. +|.. .+..++ |+|||++|++++
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 5899999999999988775 6899999865 455421 221 1222 488999 999999888776
Q ss_pred CCC------eEEEEeCC-CCeeEE---EecccCcCEEEEEEcC---CCCEEEEEeCC-CcEEEEECCCc
Q psy11350 342 LDA------FGRVWDLR-TGRCIM---FLEGHLKSVFSVDFSP---DGYHLATGSED-NAVKIWDLRKR 396 (471)
Q Consensus 342 ~dg------~i~iwd~~-~~~~~~---~~~~h~~~v~~~~~sp---~~~~l~s~s~d-g~i~iwd~~~~ 396 (471)
.+. .|.+|++. +++... ....+...+..++|+| +|++|++++.+ +.|.+|+++..
T Consensus 274 ~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 274 RANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 432 89999996 565443 2333455677899999 89999998865 89999998765
No 158
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=1.8e-17 Score=152.73 Aligned_cols=241 Identities=9% Similarity=0.093 Sum_probs=178.5
Q ss_pred ecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEee------cCCCCEEEEEEe-eCCCCCCccEEEEEeC-C
Q psy11350 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR------GHDCNVGAIEFH-PLPSEGAVCSLASCAQ-D 220 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~l~~~-~~~~~~~~~~l~s~~~-d 220 (471)
.+|-..+.+++++|+|.++++...++.|.+||.. ++.+..+. +|...+.++++. +++. ++++... +
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-----l~v~~~~~~ 99 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-----IIVTERSPT 99 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTE-----EEEEECGGG
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCe-----EEEEcCCCC
Confidence 3566789999999999988888889999999976 66666654 234578899995 5554 4444433 8
Q ss_pred CcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccc----cccC-CCCcceEEEEECCCCCEE
Q psy11350 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA----NLEG-HEPFRVSRIKFHPSGRFL 295 (471)
Q Consensus 221 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~----~~~~-~~~~~v~~l~~~~~~~~l 295 (471)
+.|.+|| .+++.+..+.......+..++++|+|+.+++...++.+.+..... .+.. .....+.+++++|+++++
T Consensus 100 ~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 100 HQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp CEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred CEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEE
Confidence 9999999 567776666544434789999999999877777677655533211 1111 112358899999999977
Q ss_pred EEEecCCeEEEEECCCCcEEEEeeCC--CCCeEEEEEeCCCCEEEEEeCCC-eEEEEeCCCCeeEEEecccC--cCEEEE
Q psy11350 296 GTCCWDHSWRLWDLNQGQEVLHQEGH--GKPVYCMSFQGDGSVVATGGLDA-FGRVWDLRTGRCIMFLEGHL--KSVFSV 370 (471)
Q Consensus 296 ~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~s~d~~~l~t~~~dg-~i~iwd~~~~~~~~~~~~h~--~~v~~~ 370 (471)
++...++.|++||.. ++.+..+..+ ...+..++++++|+++++...++ .|.+||. +++.+..+..+. ..+.++
T Consensus 179 v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDV 256 (286)
T ss_dssp EEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEE
T ss_pred EEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeE
Confidence 777789999999974 5566666443 36789999999999888888776 9999995 566666665543 348899
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCccch
Q psy11350 371 DFSPDGYHLATGSEDNAVKIWDLRKRRLL 399 (471)
Q Consensus 371 ~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 399 (471)
+++|+|+++++ +.|+.|++|++....++
T Consensus 257 ~~~~~g~l~vs-~~~~~v~v~~~~~~~pv 284 (286)
T 1q7f_A 257 ALMDDGSVVLA-SKDYRLYIYRYVQLAPV 284 (286)
T ss_dssp EEETTTEEEEE-ETTTEEEEEECSCCCCT
T ss_pred EECCCCcEEEE-CCCCeEEEEEccccccc
Confidence 99999987777 67999999998765443
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=1.4e-17 Score=159.00 Aligned_cols=225 Identities=13% Similarity=0.090 Sum_probs=151.2
Q ss_pred cCCCEEEEEeC----CCcEEEEeC--CCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCC----CcEEEEeCCC-
Q psy11350 162 PDSQHVATASW----SGLCKLWTV--PECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD----GSVKLWSLDK- 230 (471)
Q Consensus 162 ~~~~~l~tg~~----dg~i~iwd~--~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d----g~i~iwd~~~- 230 (471)
+...++++|+. ++.|++|.+ .+++.......+...+..++|+|++. +|++++.+ +.|.+|++..
T Consensus 11 ~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~-----~l~~~~~~~~~~~~v~~~~~~~~ 85 (361)
T 3scy_A 11 DSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGK-----FVYSVNEFSKDQAAVSAFAFDKE 85 (361)
T ss_dssp GGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSS-----EEEEEECCSSTTCEEEEEEEETT
T ss_pred CCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCC-----EEEEEEccCCCCCcEEEEEEeCC
Confidence 34456667754 567888866 45654433222667778899999998 68888775 7999998865
Q ss_pred -Ccc--eeeecCCCCcceEEEEECCCCCEEEEEe-CCCeEEecccc-----ccc------cCC-------CCcceEEEEE
Q psy11350 231 -DTP--LANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHSWRLDTPL-----ANL------EGH-------EPFRVSRIKF 288 (471)
Q Consensus 231 -~~~--~~~~~~~~~~~v~~~~~s~~~~~i~~~~-~d~~~~~~~~~-----~~~------~~~-------~~~~v~~l~~ 288 (471)
+.. +.....+. .....+++ +++++++++ .++.+.++... ..+ .+. ....+.+++|
T Consensus 86 ~g~~~~~~~~~~~~-~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 162 (361)
T 3scy_A 86 KGTLHLLNTQKTMG-ADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRI 162 (361)
T ss_dssp TTEEEEEEEEECSS-SCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEE
T ss_pred CCcEEEeeEeccCC-CCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEE
Confidence 332 22333222 25677777 888877776 45554443211 110 010 0123578999
Q ss_pred CCCCCEEEEEec-CCeEEEEECCCCc-------E------EEEeeCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCC
Q psy11350 289 HPSGRFLGTCCW-DHSWRLWDLNQGQ-------E------VLHQEGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRT 353 (471)
Q Consensus 289 ~~~~~~l~~~~~-dg~i~iwd~~~~~-------~------~~~~~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~ 353 (471)
+|+|+++++++. ++.|.+|++.... . ......+......++|+|||+++++++ .++.|.+|++.+
T Consensus 163 spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 242 (361)
T 3scy_A 163 TPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD 242 (361)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET
T ss_pred CCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC
Confidence 999997766654 7899999887543 1 122234456678999999999887776 689999999987
Q ss_pred Cee--EEEe---cccCcCEEEEEEcCCCCEEEEEeCC--CcEEEEECC
Q psy11350 354 GRC--IMFL---EGHLKSVFSVDFSPDGYHLATGSED--NAVKIWDLR 394 (471)
Q Consensus 354 ~~~--~~~~---~~h~~~v~~~~~sp~~~~l~s~s~d--g~i~iwd~~ 394 (471)
++. +..+ ..+...+..++|+|||++|+++..+ +.|.+|++.
T Consensus 243 g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 243 GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 754 2222 2334567899999999998776654 899999996
No 160
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=1.1e-17 Score=157.73 Aligned_cols=239 Identities=12% Similarity=0.074 Sum_probs=180.2
Q ss_pred CcCeEEEEEecCCCEEEEEeCC------------------------CcEEEEeCCCCceEEEee-cCCCCEEEEEEeeCC
Q psy11350 152 TRPISYCSFSPDSQHVATASWS------------------------GLCKLWTVPECELVQTFR-GHDCNVGAIEFHPLP 206 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~~d------------------------g~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~~ 206 (471)
-+.|.+++++|+|+++++...+ +.|.+||..+++.+..+. ++-.....++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3579999999999999888766 479999999898877664 344678899999998
Q ss_pred CCCCccEEEEEeCCCcEEEEeCCCCc-ceeeec--------CCCCcceEEEEECC-CCCEEEEEe-CCCeEEecccccc-
Q psy11350 207 SEGAVCSLASCAQDGSVKLWSLDKDT-PLANLE--------GHEPFRVSRIKFHP-SGRFLGTCC-WDHSWRLDTPLAN- 274 (471)
Q Consensus 207 ~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~--------~~~~~~v~~~~~s~-~~~~i~~~~-~d~~~~~~~~~~~- 274 (471)
. ++++...++.|++|+..... .+..+. ...-.....++++| ++.++++.+ .++.+........
T Consensus 103 ~-----l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~ 177 (329)
T 3fvz_A 103 N-----YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKF 177 (329)
T ss_dssp C-----EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCE
T ss_pred C-----EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCE
Confidence 7 78888888999999985442 444442 11122688999999 788777775 5666555332111
Q ss_pred ---ccCC---------CCcceEEEEECCC-CCEEEEEecCCeEEEEECCCCcEEEEee--CCCCCeEEEEEeC------C
Q psy11350 275 ---LEGH---------EPFRVSRIKFHPS-GRFLGTCCWDHSWRLWDLNQGQEVLHQE--GHGKPVYCMSFQG------D 333 (471)
Q Consensus 275 ---~~~~---------~~~~v~~l~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~------d 333 (471)
+... .-.....|+++|+ +.++++...++.|++||..+++.+..+. .+...+.+++|+| +
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~ 257 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVN 257 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeC
Confidence 1110 0123789999998 6667777788999999999888887773 4567889999999 3
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEec---ccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 334 GSVVATGGLDAFGRVWDLRTGRCIMFLE---GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 334 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
|..+++...+..|++||+.+++.+..+. ++...+.+|+++|+|.++++...++.|++|++..
T Consensus 258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 3333333345589999999999988873 6777899999999998888888999999999864
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=2.5e-18 Score=165.70 Aligned_cols=222 Identities=13% Similarity=-0.059 Sum_probs=151.1
Q ss_pred eecCCcCeEE-----EEEecCCCEEEEEeC-CC--cEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeC
Q psy11350 148 QVGDTRPISY-----CSFSPDSQHVATASW-SG--LCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ 219 (471)
Q Consensus 148 ~~gh~~~V~~-----~~~s~~~~~l~tg~~-dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~ 219 (471)
+..|...... .+|||||++|+.++. +| .|.+||+.+++......++...+..+.|+|++. .|+.++.
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~-----~l~~~~~ 100 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD-----ALFYVKD 100 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS-----EEEEEET
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC-----EEEEEeC
Confidence 3345555555 789999999998887 66 488999999888877777766666788999998 6999998
Q ss_pred CCcEEEEeCCCCcceeeecCCCCcceEEE--EECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCE---
Q psy11350 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRI--KFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRF--- 294 (471)
Q Consensus 220 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~--~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~--- 294 (471)
++.|.+||+.+++....+..+.. .+... .++|++.+++....++. .+.|...+
T Consensus 101 ~~~l~~~d~~~g~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~---------------------~~~~~~~~~~~ 158 (388)
T 3pe7_A 101 GRNLMRVDLATLEENVVYQVPAE-WVGYGTWVANSDCTKLVGIEIRRE---------------------DWVPLTDWKKF 158 (388)
T ss_dssp TTEEEEEETTTCCEEEEEECCTT-EEEEEEEEECTTSSEEEEEEEEGG---------------------GCCCCCSHHHH
T ss_pred CCeEEEEECCCCcceeeeechhh-cccccceeECCCCCeeccccccCc---------------------ccccccccchh
Confidence 99999999999876655554433 22222 23666666554221100 00000000
Q ss_pred --EEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeC-CCCEEEEEeCC------CeEEEEeCCCCeeEEEecccC-
Q psy11350 295 --LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG-DGSVVATGGLD------AFGRVWDLRTGRCIMFLEGHL- 364 (471)
Q Consensus 295 --l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~h~- 364 (471)
++....++.|.+||+.+++.. .+..+...+..++|+| ||+.|+....+ ..|.++|+..+... .+..+.
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~ 236 (388)
T 3pe7_A 159 HEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAE 236 (388)
T ss_dssp HHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCT
T ss_pred hhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCC
Confidence 011223478999999988654 4445667789999999 99988877653 37888888765443 444444
Q ss_pred -cCEEEEEEcCCCCEEEEEeC-CC----cEEEEECCCccc
Q psy11350 365 -KSVFSVDFSPDGYHLATGSE-DN----AVKIWDLRKRRL 398 (471)
Q Consensus 365 -~~v~~~~~sp~~~~l~s~s~-dg----~i~iwd~~~~~~ 398 (471)
..+..++|+|||+.|+..+. ++ .|++||+.+++.
T Consensus 237 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 237 GESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp TEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred CcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 35888999999997765443 22 399999998874
No 162
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.78 E-value=5.7e-17 Score=154.62 Aligned_cols=241 Identities=11% Similarity=-0.019 Sum_probs=167.0
Q ss_pred eeecCCcCeEEEEEecCCCEEEEEeC----------CCcEEEEeCCCCceEEEeecC------CCCEEEEEEeeCCCCCC
Q psy11350 147 SQVGDTRPISYCSFSPDSQHVATASW----------SGLCKLWTVPECELVQTFRGH------DCNVGAIEFHPLPSEGA 210 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~~~~l~tg~~----------dg~i~iwd~~~~~~~~~~~~h------~~~v~~l~~~~~~~~~~ 210 (471)
.+..+..+ .++|+|||++|++++. ++.|.+||+.+++.+..+..+ ......++++|++.
T Consensus 46 ~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~--- 120 (361)
T 2oiz_A 46 MVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGK--- 120 (361)
T ss_dssp EEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSS---
T ss_pred EecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCC---
Confidence 34445555 8999999999998863 578999999999988887643 23456899999998
Q ss_pred ccEEEEEeC--CCcEEEEeCCCCcceee-ecCCCCcceEEEEECCCC-CEEEEEeCCCeEEeccc---c---------cc
Q psy11350 211 VCSLASCAQ--DGSVKLWSLDKDTPLAN-LEGHEPFRVSRIKFHPSG-RFLGTCCWDHSWRLDTP---L---------AN 274 (471)
Q Consensus 211 ~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~s~~~-~~i~~~~~d~~~~~~~~---~---------~~ 274 (471)
+|+++.. +++|.+||+.+++.+.. +.... ...+.+.|++ ..+++.+.|+.+.+... . ..
T Consensus 121 --~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~---~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~ 195 (361)
T 2oiz_A 121 --FIVLQNASPATSIGIVDVAKGDYVEDVTAAAG---CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQM 195 (361)
T ss_dssp --EEEEEEESSSEEEEEEETTTTEEEEEEGGGTT---EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCC
T ss_pred --EEEEECCCCCCeEEEEECCCCcEEEEEecCCC---cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccce
Confidence 5766653 68999999999988776 54322 2224455554 45555556655332111 0 01
Q ss_pred ccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcE--EEEeeCC------C----CCeEEEEEeCCCCEEEEEeC
Q psy11350 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE--VLHQEGH------G----KPVYCMSFQGDGSVVATGGL 342 (471)
Q Consensus 275 ~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~------~----~~v~~~~~s~d~~~l~t~~~ 342 (471)
+... . ....+.++|++..++..+.++.|.++|+..... ...+... . .....++|+|+++.++++..
T Consensus 196 ~~~~-~-~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~ 273 (361)
T 2oiz_A 196 FSVK-D-DPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMH 273 (361)
T ss_dssp SCTT-T-SCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEE
T ss_pred EcCC-C-CceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEc
Confidence 1111 1 112233456777788888899999999975532 2221110 0 11113789999887777643
Q ss_pred -----------CCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCc--cchhee
Q psy11350 343 -----------DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR--RLLKWC 402 (471)
Q Consensus 343 -----------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~--~~~~~~ 402 (471)
.+.|.+||+.+++.+.++..+. +.+++|+|+|++|++++. ++|.+||..++ +.+.++
T Consensus 274 ~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 274 PDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp SSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred cCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence 3589999999999999998876 999999999999998887 99999999999 877665
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.78 E-value=5.8e-18 Score=172.41 Aligned_cols=227 Identities=10% Similarity=-0.006 Sum_probs=166.1
Q ss_pred cCC-cCeEEEEEecCCCEEEEEeC---CCcEEEEeCC---CCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCc
Q psy11350 150 GDT-RPISYCSFSPDSQHVATASW---SGLCKLWTVP---ECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGS 222 (471)
Q Consensus 150 gh~-~~V~~~~~s~~~~~l~tg~~---dg~i~iwd~~---~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 222 (471)
.|. ..|.+++|||| +++++++. +....||.+. .+... .+..+ ..+...+|+|++.. .+++.+.++.
T Consensus 61 ~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~----~~~~s~~~~~ 133 (582)
T 3o4h_A 61 REPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEA----VVFTGATEDR 133 (582)
T ss_dssp SSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSC----EEEEEECSSC
T ss_pred cccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCe----EEEEecCCCC
Confidence 444 68999999999 77777775 4545565443 23333 33332 23457789998864 4455555556
Q ss_pred EEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCC----CeEEecc----ccccccCCCCcceEEEEECCCCCE
Q psy11350 223 VKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD----HSWRLDT----PLANLEGHEPFRVSRIKFHPSGRF 294 (471)
Q Consensus 223 i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d----~~~~~~~----~~~~~~~~~~~~v~~l~~~~~~~~ 294 (471)
+.+||+.+++.......+. .+++|+|||+++++++.+ ..+.++. ....+..+ ...+..++|+|||++
T Consensus 134 ~~l~d~~~g~~~~l~~~~~----~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~-~~~~~~~~~SpDG~~ 208 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG----FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG-EGSFSSASISPGMKV 208 (582)
T ss_dssp EEEEEEETTEEEEEEEESS----CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS-SCEEEEEEECTTSCE
T ss_pred ceEEEccCCcEEEeecCCC----ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC-CCccccceECCCCCE
Confidence 6699998886554443322 789999999999988776 3333322 23344444 557899999999999
Q ss_pred EEEEecCC--eEEEEECCCCcEEEEeeCCCCCeEEEE--------EeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccC
Q psy11350 295 LGTCCWDH--SWRLWDLNQGQEVLHQEGHGKPVYCMS--------FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364 (471)
Q Consensus 295 l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~--------~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~ 364 (471)
|+++..++ .|++||+.+++.. .+.+|...+..++ |+|||.++++++.++.+++|++ ++... .+.
T Consensus 209 l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~ 282 (582)
T 3o4h_A 209 TAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQ 282 (582)
T ss_dssp EEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCS
T ss_pred EEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCC
Confidence 99888888 8999999998877 7777877777777 9999999999999999999999 76554 344
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCc---EEEEECCC
Q psy11350 365 KSVFSVDFSPDGYHLATGSEDNA---VKIWDLRK 395 (471)
Q Consensus 365 ~~v~~~~~sp~~~~l~s~s~dg~---i~iwd~~~ 395 (471)
+.+.+++|+ +++++++++.+.+ +.+||...
T Consensus 283 ~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 283 GNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp SEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred CceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 678999999 9999998887754 77777654
No 164
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.78 E-value=1.5e-17 Score=156.66 Aligned_cols=249 Identities=11% Similarity=-0.015 Sum_probs=163.4
Q ss_pred EEEEEeCCCcEEEEeCCCCcceeeecCCCCc-ceEEEEECCCCCEEEEEe-CCCeEEeccc-----cccccCCC----Cc
Q psy11350 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPF-RVSRIKFHPSGRFLGTCC-WDHSWRLDTP-----LANLEGHE----PF 281 (471)
Q Consensus 213 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~i~~~~-~d~~~~~~~~-----~~~~~~~~----~~ 281 (471)
++++++.++.|.+||+.+++.+..+...... .+..++|+|+|+++++++ .++.+.++.. ...+.... ..
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 6899999999999999999888877644322 377899999998765554 4566544321 11122111 11
Q ss_pred ceEEEEECCCCCEEEEEe------------cCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEE
Q psy11350 282 RVSRIKFHPSGRFLGTCC------------WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349 (471)
Q Consensus 282 ~v~~l~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iw 349 (471)
.+..++|+|+|++|++++ .++.|.+||+.+++.+..+.. ...+.+++|+|+|++|+++ ++.|++|
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 467899999999998886 579999999999887777664 4567889999999988887 6889999
Q ss_pred eCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCC------------------------cEEEEECCCccchheecc-
Q psy11350 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN------------------------AVKIWDLRKRRLLKWCTQ- 404 (471)
Q Consensus 350 d~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg------------------------~i~iwd~~~~~~~~~~~~- 404 (471)
|+.+++.+..+..+.. ...+.|+|++.+++.++..+ .|.+||+.+++.. .+..
T Consensus 160 d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~ 237 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVR 237 (337)
T ss_dssp ETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEE
T ss_pred ECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecC
Confidence 9999988877765431 11237899988766554332 4689999998875 2221
Q ss_pred cCCCccceeeccccceeeeecccCCCcccccchhhhcccccceeeecccceeeeecCCeEEEeec
Q psy11350 405 LLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPIPLLLDIQKLTFKFDSDLHAMVLN 469 (471)
Q Consensus 405 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fs~dg~~lA~~~~ 469 (471)
........+.+..|....+.. .+...++.......+..+........++|+|||++|++...
T Consensus 238 ~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 299 (337)
T 1pby_B 238 IMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGA 299 (337)
T ss_dssp ECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESB
T ss_pred CCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcC
Confidence 111122223444443332222 11122222222222333333345678999999998887643
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.77 E-value=1.3e-17 Score=174.10 Aligned_cols=232 Identities=14% Similarity=0.082 Sum_probs=162.6
Q ss_pred CeEEEEEecCCCEEEEEeC---------CCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEE
Q psy11350 154 PISYCSFSPDSQHVATASW---------SGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~---------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 224 (471)
.|.+++|||||++|++++. ++.|++||+.+++.+.... ....+..++|+|++. .|+.+. ++.|+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~-----~la~~~-~~~i~ 133 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGS-----KLAYVY-QNNIY 133 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTT-----CEEEEE-TTEEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcccccceECCCCC-----EEEEEE-CCeEE
Confidence 4889999999999998876 6899999999887631111 135688999999998 477764 78999
Q ss_pred EEeCCCCcceeeecCCCCcc-----------------eEEEEECCCCCEEEEEeCCC-----------------------
Q psy11350 225 LWSLDKDTPLANLEGHEPFR-----------------VSRIKFHPSGRFLGTCCWDH----------------------- 264 (471)
Q Consensus 225 iwd~~~~~~~~~~~~~~~~~-----------------v~~~~~s~~~~~i~~~~~d~----------------------- 264 (471)
+|++.+++............ ..+++|+|||++|++++.|.
T Consensus 134 ~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 134 LKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp EESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 99998887654332221111 24899999999999988652
Q ss_pred -----------eEEecc---ccc----c------ccCCCCcceEEEEECCCCCEEEEEecC----CeEEEEE----CCCC
Q psy11350 265 -----------SWRLDT---PLA----N------LEGHEPFRVSRIKFHPSGRFLGTCCWD----HSWRLWD----LNQG 312 (471)
Q Consensus 265 -----------~~~~~~---~~~----~------~~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~iwd----~~~~ 312 (471)
.+.++. ... . +..+ ...+..++|+||++++++.... ..|.+|| +.++
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS-DYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS-CEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC-cceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 122221 111 1 1223 4568999999998777764433 2488999 8777
Q ss_pred cEEEEe----eCCCCCeE-----EEEEeCCCCEEEE--EeCCC--eEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEE
Q psy11350 313 QEVLHQ----EGHGKPVY-----CMSFQGDGSVVAT--GGLDA--FGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379 (471)
Q Consensus 313 ~~~~~~----~~~~~~v~-----~~~~s~d~~~l~t--~~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 379 (471)
+....+ .+|...+. .+.|+|||+.|+. +..+| .|++||+.+++ ...+..+...+..+.++ +++.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i 370 (719)
T 1z68_A 293 DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSL 370 (719)
T ss_dssp ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEE
T ss_pred ceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEE
Confidence 655444 46776666 7899999985544 44555 57778887776 44666666678888777 77777
Q ss_pred EEEeCC-----CcEEEEECCC
Q psy11350 380 ATGSED-----NAVKIWDLRK 395 (471)
Q Consensus 380 ~s~s~d-----g~i~iwd~~~ 395 (471)
+..+.+ +.+++|.+..
T Consensus 371 ~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 371 FYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEEESCGGGCTTCBEEEEEEC
T ss_pred EEEEecCCCCCceEEEEEEeC
Confidence 666654 8888998754
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.77 E-value=1e-16 Score=153.25 Aligned_cols=227 Identities=10% Similarity=0.029 Sum_probs=150.6
Q ss_pred EEEEEeCC--CcEEEEeC--CCCceEEE--ee-cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCC-CCcceeee
Q psy11350 166 HVATASWS--GLCKLWTV--PECELVQT--FR-GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD-KDTPLANL 237 (471)
Q Consensus 166 ~l~tg~~d--g~i~iwd~--~~~~~~~~--~~-~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~ 237 (471)
+|++|++. +.|.+|++ .+++.... .. .....+..++|+|++. +|++++.+ .|.+|++. +++.....
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~-----~l~~~~~~-~v~~~~~~~~g~~~~~~ 77 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERK-----NIYGAAMK-KWSSFAVKSPTEIVHEA 77 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSS-----EEEEEEBT-EEEEEEEEETTEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCC-----EEEEEccc-eEEEEEECCCCCEEEee
Confidence 46667654 56877764 45654322 21 2334678999999998 68888887 99999997 67654332
Q ss_pred cCCCCcceEEEEECCCCCE--EEEEe-------------CCCeEEecccc------ccccC---CCCcceEEEEECCCCC
Q psy11350 238 EGHEPFRVSRIKFHPSGRF--LGTCC-------------WDHSWRLDTPL------ANLEG---HEPFRVSRIKFHPSGR 293 (471)
Q Consensus 238 ~~~~~~~v~~~~~s~~~~~--i~~~~-------------~d~~~~~~~~~------~~~~~---~~~~~v~~l~~~~~~~ 293 (471)
.......+..++|+|+|++ ++++. .++.+.++... ..+.. .....+.+++|+|+|+
T Consensus 78 ~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 78 SHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET 157 (365)
T ss_dssp EEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred EeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC
Confidence 2111113556899999995 44442 46664443211 11111 1234689999999999
Q ss_pred EEEEEec-CCeEEEEECC-CCcEE--EEee--CCCCCeEEEEEeCCCCEEEEEeC-CCeEEEEeCC--CCeeE---E---
Q psy11350 294 FLGTCCW-DHSWRLWDLN-QGQEV--LHQE--GHGKPVYCMSFQGDGSVVATGGL-DAFGRVWDLR--TGRCI---M--- 358 (471)
Q Consensus 294 ~l~~~~~-dg~i~iwd~~-~~~~~--~~~~--~~~~~v~~~~~s~d~~~l~t~~~-dg~i~iwd~~--~~~~~---~--- 358 (471)
+|++++. ++.|++||+. +++.. ..+. .|...+..++|+|||++|++++. ++.|.+|++. +++.. .
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 237 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP 237 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE
Confidence 8887764 6799999998 67643 2333 24667899999999998887764 7899999765 56542 1
Q ss_pred Eec----ccCc------CEEEEE-EcCCCCEEEEEeCC-C-----cEEEEECC-Cccc
Q psy11350 359 FLE----GHLK------SVFSVD-FSPDGYHLATGSED-N-----AVKIWDLR-KRRL 398 (471)
Q Consensus 359 ~~~----~h~~------~v~~~~-~sp~~~~l~s~s~d-g-----~i~iwd~~-~~~~ 398 (471)
.+. +|.. .+..++ |+|||++|++++.+ + .|.+|++. ++++
T Consensus 238 ~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~ 295 (365)
T 1jof_A 238 LIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI 295 (365)
T ss_dssp SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE
T ss_pred cCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCE
Confidence 222 1222 588999 99999998876543 2 89999996 5554
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.77 E-value=3.4e-18 Score=165.02 Aligned_cols=235 Identities=12% Similarity=-0.023 Sum_probs=155.0
Q ss_pred CeEEEEEecCCCEEEEEeCC---CcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC
Q psy11350 154 PISYCSFSPDSQHVATASWS---GLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK 230 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 230 (471)
.+.+++|||||++|+.+... ..|++||+.+++......++......+.|+|++. .|+.++.++.|.+||+.+
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~-----~l~~~~~~~~l~~~d~~~ 111 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER-----AFFYVKNELNLMKVDLET 111 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS-----EEEEEETTTEEEEEETTT
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC-----EEEEEEcCCcEEEEECCC
Confidence 36778999999998877543 3789999988876554433333233478999998 688888899999999988
Q ss_pred CcceeeecCCCCcceEE-------------------EEECCCCCEEEEEe-----CCCeEEec---cc-cccccCCCCcc
Q psy11350 231 DTPLANLEGHEPFRVSR-------------------IKFHPSGRFLGTCC-----WDHSWRLD---TP-LANLEGHEPFR 282 (471)
Q Consensus 231 ~~~~~~~~~~~~~~v~~-------------------~~~s~~~~~i~~~~-----~d~~~~~~---~~-~~~~~~~~~~~ 282 (471)
++.......+.. .... +.|+|+++.++... .+..+.+. .. ...+..+ ...
T Consensus 112 ~~~~~~~~~~~~-~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~-~~~ 189 (396)
T 3c5m_A 112 LEEQVIYTVDEE-WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD-TAW 189 (396)
T ss_dssp CCEEEEEECCTT-EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE-SSC
T ss_pred CCcEEEEecccc-cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC-Ccc
Confidence 876555543332 1112 34577777655442 22222221 11 1112222 346
Q ss_pred eEEEEECC-CCCEEEEEecC------CeEEEEECCCCcEEEEeeCC-CCCeEEEEEeCCCCEEEEEeCC-----CeEEEE
Q psy11350 283 VSRIKFHP-SGRFLGTCCWD------HSWRLWDLNQGQEVLHQEGH-GKPVYCMSFQGDGSVVATGGLD-----AFGRVW 349 (471)
Q Consensus 283 v~~l~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~d~~~l~t~~~d-----g~i~iw 349 (471)
+..+.|+| ++..|+..+.+ ..|.+||+..++........ ...+..++|+|||++|+.++.+ +.|++|
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 269 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA 269 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE
Confidence 88999999 78877776643 36899998766533322211 2357889999999987776543 459999
Q ss_pred eCCCCeeEEEecccCcCEEEEEEcC-CCCEEEEEe----------------CCCcEEEEECCCccc
Q psy11350 350 DLRTGRCIMFLEGHLKSVFSVDFSP-DGYHLATGS----------------EDNAVKIWDLRKRRL 398 (471)
Q Consensus 350 d~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s----------------~dg~i~iwd~~~~~~ 398 (471)
|+.+++........ ... +.|+| +|+++++++ .++.|.+||+.+++.
T Consensus 270 d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 270 NPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp CTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred ECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 99988654332211 233 89999 999888765 346799999987764
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=7.7e-17 Score=166.73 Aligned_cols=246 Identities=13% Similarity=0.032 Sum_probs=173.3
Q ss_pred ecCCcCeEEEEEecCCCEEEEE--eCCCcEEEEeCCCCceEEEeecCCCCEE---------EEEEe--eCCCCCCccE-E
Q psy11350 149 VGDTRPISYCSFSPDSQHVATA--SWSGLCKLWTVPECELVQTFRGHDCNVG---------AIEFH--PLPSEGAVCS-L 214 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~~l~tg--~~dg~i~iwd~~~~~~~~~~~~h~~~v~---------~l~~~--~~~~~~~~~~-l 214 (471)
.+|...|..++|++++-+++.. +.++...||....+.....+..|...+. ...|+ |++. . |
T Consensus 20 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~-----~~l 94 (662)
T 3azo_A 20 ASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGG-----PLL 94 (662)
T ss_dssp HHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSS-----CEE
T ss_pred hhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCC-----eEE
Confidence 4688999999999886666666 5578899999655555667777766666 66676 8887 5 5
Q ss_pred EEEeC-CCcEEEEeCC--CCcceeeecCC----CCcceEEEEECCCCCEEEEEeCC----------CeEEe---cc----
Q psy11350 215 ASCAQ-DGSVKLWSLD--KDTPLANLEGH----EPFRVSRIKFHPSGRFLGTCCWD----------HSWRL---DT---- 270 (471)
Q Consensus 215 ~s~~~-dg~i~iwd~~--~~~~~~~~~~~----~~~~v~~~~~s~~~~~i~~~~~d----------~~~~~---~~---- 270 (471)
+.++. +..|.+|++. .......+... ....+..++|+|||+.|++++.+ ..+.+ ..
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred EEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 55443 5667777765 20333444432 23378899999999999988876 23322 22
Q ss_pred ---cccccc-CCCCcceEEEEECCCCCEEEEEecC--------CeEEEEECC-CC---cEEEEeeCCCCCeEEEEEeCCC
Q psy11350 271 ---PLANLE-GHEPFRVSRIKFHPSGRFLGTCCWD--------HSWRLWDLN-QG---QEVLHQEGHGKPVYCMSFQGDG 334 (471)
Q Consensus 271 ---~~~~~~-~~~~~~v~~l~~~~~~~~l~~~~~d--------g~i~iwd~~-~~---~~~~~~~~~~~~v~~~~~s~d~ 334 (471)
....+. .+ ...+..++|+|||++|+.++.+ ..|++||+. ++ +......+|...+..+.|+|||
T Consensus 175 ~~~~~~~l~~~~-~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg 253 (662)
T 3azo_A 175 DRSAVRELSDDA-HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG 253 (662)
T ss_dssp CGGGSEESSCSC-SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTS
T ss_pred cCCceeEEEecC-CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCC
Confidence 222333 33 3467889999999999988755 379999998 56 4444445567889999999999
Q ss_pred CEEEEEeCCC--eEEEEeCCCCeeEEEecccCcC--------EEEEEEcCCCCEEEEEeCCCcEEEE--ECCCccchhee
Q psy11350 335 SVVATGGLDA--FGRVWDLRTGRCIMFLEGHLKS--------VFSVDFSPDGYHLATGSEDNAVKIW--DLRKRRLLKWC 402 (471)
Q Consensus 335 ~~l~t~~~dg--~i~iwd~~~~~~~~~~~~h~~~--------v~~~~~sp~~~~l~s~s~dg~i~iw--d~~~~~~~~~~ 402 (471)
+++++++.++ .|++||+.+++.......+... +..++|+|+++++++++. +.++|| |+..++ +..+
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l 331 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDA 331 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEEC
T ss_pred eEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEe
Confidence 9888888888 6777777677655444433322 567899999999999998 999999 655554 3444
No 169
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.77 E-value=4.2e-16 Score=144.39 Aligned_cols=240 Identities=12% Similarity=0.031 Sum_probs=175.4
Q ss_pred eeecCCcCeEEEEEecCCC-EEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEE
Q psy11350 147 SQVGDTRPISYCSFSPDSQ-HVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL 225 (471)
Q Consensus 147 ~~~gh~~~V~~~~~s~~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 225 (471)
.+..+.....+++|+|+|+ +++++..++.|.+|+..++ ...+..+...+.+++++|++. ++++...++.|.+
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~-----l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGH-----LIACSHGLRRLER 94 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCC-----EEEEETTTTEEEE
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCc-----EEEEecCCCeEEE
Confidence 3445667788999999998 7788888999999998876 666777778899999999987 5666666789999
Q ss_pred EeCCCCcceeeecC---CCCcceEEEEECCCCCEEEEE----eC-------------C-CeEEeccc--cccccCCCCcc
Q psy11350 226 WSLDKDTPLANLEG---HEPFRVSRIKFHPSGRFLGTC----CW-------------D-HSWRLDTP--LANLEGHEPFR 282 (471)
Q Consensus 226 wd~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~i~~~----~~-------------d-~~~~~~~~--~~~~~~~~~~~ 282 (471)
||..+++....... .....+..++++|+|+++++. +. . +.+.+... ...+..+ ...
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~-~~~ 173 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRD-RVK 173 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECC-CSS
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecC-CCC
Confidence 99987765433221 112246789999999988873 21 1 23444321 1122222 335
Q ss_pred eEEEEECCCCCEEEEEecCCeEEEEECC-CCcE---EEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEE
Q psy11350 283 VSRIKFHPSGRFLGTCCWDHSWRLWDLN-QGQE---VLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358 (471)
Q Consensus 283 v~~l~~~~~~~~l~~~~~dg~i~iwd~~-~~~~---~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~ 358 (471)
...++|+|+++.+++.+.++.|.+||+. +++. ...+..+...+.+++++++|+++++. ++.|.+||.. ++.+.
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~ 250 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELG 250 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEE
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEE
Confidence 7899999999988777778999999997 4544 23333345566789999999877666 8899999986 77787
Q ss_pred EecccCcCEEEEEE-cCCCCEEEEEeCCCcEEEEECCCccch
Q psy11350 359 FLEGHLKSVFSVDF-SPDGYHLATGSEDNAVKIWDLRKRRLL 399 (471)
Q Consensus 359 ~~~~h~~~v~~~~~-sp~~~~l~s~s~dg~i~iwd~~~~~~~ 399 (471)
.+..+.. +++++| .|+++.|++++.++ +.-++..++++.
T Consensus 251 ~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~~ 290 (296)
T 3e5z_A 251 RVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGLE 290 (296)
T ss_dssp EEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBCC
T ss_pred EEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccccc
Confidence 8877777 999999 58999998888764 555677666544
No 170
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.75 E-value=5.1e-17 Score=153.85 Aligned_cols=193 Identities=16% Similarity=0.098 Sum_probs=139.3
Q ss_pred EEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEe-CCCeEEeccc-----cc
Q psy11350 200 IEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHSWRLDTP-----LA 273 (471)
Q Consensus 200 l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~-~d~~~~~~~~-----~~ 273 (471)
+++++.+. ++++++.++.|.+||+.+++.+..+..+....+..++|+|+|++++++. .++.+.++.. ..
T Consensus 5 ~~~~~~~~-----~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 5 PALKAGHE-----YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCTTCE-----EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccccCCCE-----EEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 44555555 7899999999999999999888887765433578999999999766554 5666554322 11
Q ss_pred cccCCC-----CcceEEEEECCCCCEEEEEecC------------CeEEEEECCCCcE---EEEeeCCCCCeEEEEEeCC
Q psy11350 274 NLEGHE-----PFRVSRIKFHPSGRFLGTCCWD------------HSWRLWDLNQGQE---VLHQEGHGKPVYCMSFQGD 333 (471)
Q Consensus 274 ~~~~~~-----~~~v~~l~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~---~~~~~~~~~~v~~~~~s~d 333 (471)
.+.... ...+..++|+|+|++|++++.+ +.|.+||+.+++. +..+. +...+.+++|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d 158 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADD 158 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTT
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCC
Confidence 222111 1236789999999999998866 8999999988543 33333 3346889999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeeEEEecccC-------------------------------------------------
Q psy11350 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHL------------------------------------------------- 364 (471)
Q Consensus 334 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~------------------------------------------------- 364 (471)
|+ +++++. .|++||+.+++.+..+..+.
T Consensus 159 g~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 235 (349)
T 1jmx_B 159 GS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 235 (349)
T ss_dssp SC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEE
T ss_pred Cc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeE
Confidence 99 555543 49999999988776654331
Q ss_pred -------------------cCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 365 -------------------KSVFSVDFSP-DGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 365 -------------------~~v~~~~~sp-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
..+.+++|+| ++++++++ ++.|.+||+.+++.+..+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~ 292 (349)
T 1jmx_B 236 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN 292 (349)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE
T ss_pred EEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc
Confidence 1345677788 99888887 7889999999888776654
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.74 E-value=1.3e-16 Score=153.55 Aligned_cols=238 Identities=13% Similarity=0.075 Sum_probs=161.1
Q ss_pred ecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEE--eeCCCCCCccEEEEE---------
Q psy11350 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEF--HPLPSEGAVCSLASC--------- 217 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~~~~~l~s~--------- 217 (471)
.+|...+.+++|+|||+.|+.++.++.|++||+.+++....+..+...+....| +|++. .++..
T Consensus 77 ~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~-----~l~~~~~~~~~~~~ 151 (388)
T 3pe7_A 77 EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCT-----KLVGIEIRREDWVP 151 (388)
T ss_dssp CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS-----EEEEEEEEGGGCCC
T ss_pred eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCC-----eeccccccCccccc
Confidence 456666667789999999999999999999999999888777777666655554 67776 44432
Q ss_pred -------------eCCCcEEEEeCCCCcceeeecCCCCcceEEEEECC-CCCEEEEEeCCC------e-EEec---cccc
Q psy11350 218 -------------AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHP-SGRFLGTCCWDH------S-WRLD---TPLA 273 (471)
Q Consensus 218 -------------~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~i~~~~~d~------~-~~~~---~~~~ 273 (471)
..+..|.+||+.+++....... .. .+..+.|+| +|+.|+.+..++ . |.+. ....
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~ 229 (388)
T 3pe7_A 152 LTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-NQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR 229 (388)
T ss_dssp CCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE-SS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE
T ss_pred ccccchhhhhhccCCcceEEEEECCCCceEEeecC-Cc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE
Confidence 2346799999988865444332 22 688999999 999998877642 2 3321 1222
Q ss_pred cccCCCC-cceEEEEECCCCCEEEEEecC-C----eEEEEECCCCcEEE--EeeCCCCC---eEEEEEeCCCCEEEEE--
Q psy11350 274 NLEGHEP-FRVSRIKFHPSGRFLGTCCWD-H----SWRLWDLNQGQEVL--HQEGHGKP---VYCMSFQGDGSVVATG-- 340 (471)
Q Consensus 274 ~~~~~~~-~~v~~l~~~~~~~~l~~~~~d-g----~i~iwd~~~~~~~~--~~~~~~~~---v~~~~~s~d~~~l~t~-- 340 (471)
.+..+.. ..+..+.|+|+|+.|+..+.+ + .|++||+.+++... .+.++... ...+.|+|||+.|+..
T Consensus 230 ~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 309 (388)
T 3pe7_A 230 KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQ 309 (388)
T ss_dssp ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-----
T ss_pred EeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEee
Confidence 3333322 357789999999987665432 2 49999999887432 23221000 1123799999987754
Q ss_pred -------eCCCeEEEEeCCCCeeEEEecccCc-----------CEEEEEEcCCCCEEEEEe-CCCcEEEEECC
Q psy11350 341 -------GLDAFGRVWDLRTGRCIMFLEGHLK-----------SVFSVDFSPDGYHLATGS-EDNAVKIWDLR 394 (471)
Q Consensus 341 -------~~dg~i~iwd~~~~~~~~~~~~h~~-----------~v~~~~~sp~~~~l~s~s-~dg~i~iwd~~ 394 (471)
..+..|++||+.+++. ..+..|.. .+.+++|+|||+.|+.++ .+|...||.++
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 310 DDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp -------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 4566899999998765 34555554 578899999999887665 46776676554
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=9e-16 Score=159.93 Aligned_cols=240 Identities=12% Similarity=0.021 Sum_probs=171.6
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCC-----cEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCc--
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSG-----LCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGS-- 222 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg-----~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~-- 222 (471)
+|+..+.+++|||||++||.++.++ .|++||+.+++.......+ ..+..++|+|++. .|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~-----~l~~~~~~~~~~ 195 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGK-----GMFYNAYPQQDG 195 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSS-----EEEEEECCCCSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCC-----EEEEEEECCccc
Confidence 4666789999999999999776443 8999999999877643222 2366899999998 6888777765
Q ss_pred --------------EEEEeCCCCcce--eeecCC-CCcceEEEEECCCCCEEEEEeCC-----CeEEe---cc------c
Q psy11350 223 --------------VKLWSLDKDTPL--ANLEGH-EPFRVSRIKFHPSGRFLGTCCWD-----HSWRL---DT------P 271 (471)
Q Consensus 223 --------------i~iwd~~~~~~~--~~~~~~-~~~~v~~~~~s~~~~~i~~~~~d-----~~~~~---~~------~ 271 (471)
|.+|++.+++.. ..+... ....+..+.|+|||++|+.++.. ..+.+ .. .
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 275 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITG 275 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS
T ss_pred cccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCC
Confidence 999999887632 222332 22257899999999999887752 23332 22 1
Q ss_pred ---cccccCCCCcceEEEEECCCCCEEEEEecC----CeEEEEECCCCc--EEEEeeCCCC--CeEEEEEeCCCCEEEEE
Q psy11350 272 ---LANLEGHEPFRVSRIKFHPSGRFLGTCCWD----HSWRLWDLNQGQ--EVLHQEGHGK--PVYCMSFQGDGSVVATG 340 (471)
Q Consensus 272 ---~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~iwd~~~~~--~~~~~~~~~~--~v~~~~~s~d~~~l~t~ 340 (471)
...+..+.. .+.. .|+|+|..|+..+.. +.|.+||+.++. ....+..|.. .+..++|++++.++++.
T Consensus 276 ~~~~~~l~~~~~-~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 276 ILKWVKLIDNFE-GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCY 353 (710)
T ss_dssp SCCCEEEECSSS-SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEE
T ss_pred ccceEEeeCCCC-cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEE
Confidence 233333322 2333 488899988877654 369999998764 2344445544 68889999888888888
Q ss_pred eCCCe--EEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEE-e---CCCcEEEEECCCcc
Q psy11350 341 GLDAF--GRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG-S---EDNAVKIWDLRKRR 397 (471)
Q Consensus 341 ~~dg~--i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~-s---~dg~i~iwd~~~~~ 397 (471)
..++. |++||+.+++.+..+..+.+.+..+.++|++..++.. + ..++|.+||+.+++
T Consensus 354 ~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 354 LHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 88884 6677887888778888788889999999998766533 3 34789999999877
No 173
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=3.6e-15 Score=135.89 Aligned_cols=239 Identities=7% Similarity=-0.095 Sum_probs=168.0
Q ss_pred CeEEEEEecCCCEEE-EEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc
Q psy11350 154 PISYCSFSPDSQHVA-TASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT 232 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~-tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 232 (471)
...+++++++|++++ +.+.++.|.+|+..+.........+...+.++++.+++. ++++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-----l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-----VYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-----EEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-----EEEEcC-CCEEEEEeCCCce
Confidence 678899999999766 446789999999765543322223335678899999876 455544 8899999986554
Q ss_pred ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc---ccc-cCCCCcceEEEEECCCCCEEEEEecCCeEEEEE
Q psy11350 233 PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL---ANL-EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWD 308 (471)
Q Consensus 233 ~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~---~~~-~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd 308 (471)
. ..+.......+..++++++|+.+++...++.+...... ... .......+.+++++++|+.+++...++.|.+||
T Consensus 99 ~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 99 Q-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp C-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred E-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 3 33332222368999999999977776666654432211 111 111122578899999998777766788999999
Q ss_pred CCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcE
Q psy11350 309 LNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388 (471)
Q Consensus 309 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i 388 (471)
............+...+.+++++++|.++++...++.|.+||............+...+.+++++|+|+++++...++.|
T Consensus 178 ~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 178 AESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp TTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEE
T ss_pred cCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEE
Confidence 98766544434444678899999999888887778899999987654433322344679999999999988998999999
Q ss_pred EEEECCCccch
Q psy11350 389 KIWDLRKRRLL 399 (471)
Q Consensus 389 ~iwd~~~~~~~ 399 (471)
+++++...+..
T Consensus 258 ~~~~~~~~~~~ 268 (270)
T 1rwi_B 258 VKLTSLEHHHH 268 (270)
T ss_dssp EEECCCGGGSC
T ss_pred EEEcCCCcccc
Confidence 99999877654
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.72 E-value=1.6e-14 Score=135.96 Aligned_cols=233 Identities=14% Similarity=0.082 Sum_probs=165.7
Q ss_pred eeeecCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCC----C
Q psy11350 146 CSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD----G 221 (471)
Q Consensus 146 ~~~~gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d----g 221 (471)
..+.++...+.+++|+|+|++++++..++.|.+||..+++.......+...+.+++|+|++. ++++...+ +
T Consensus 38 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~-----l~v~~~~~~~~~~ 112 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR-----LFVCYLGDFKSTG 112 (333)
T ss_dssp EEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC-----EEEEECTTSSSCC
T ss_pred EEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCc-----EEEEeCCCCCCCc
Confidence 34556777889999999999888888899999999988877665545677899999999987 56666555 6
Q ss_pred cEEEEeCCCCcceeeec-CCCCcceEEEEECCCCCEEEEEeCC------C-eEEeccc---cccccCCCCcceEEEEECC
Q psy11350 222 SVKLWSLDKDTPLANLE-GHEPFRVSRIKFHPSGRFLGTCCWD------H-SWRLDTP---LANLEGHEPFRVSRIKFHP 290 (471)
Q Consensus 222 ~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~i~~~~~d------~-~~~~~~~---~~~~~~~~~~~v~~l~~~~ 290 (471)
.|.+||..++.....+. ......+.++.++|+|+++++...+ + .+.+... ...+... ...+..++|+|
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~i~~~~ 191 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-ISVANGIALST 191 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-ESSEEEEEECT
T ss_pred eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-CCcccceEECC
Confidence 89999998776543332 1223478999999999887776532 2 2433211 1111111 22478899999
Q ss_pred CCCEEEEE-ecCCeEEEEECCC-CcEEEE--------eeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEe
Q psy11350 291 SGRFLGTC-CWDHSWRLWDLNQ-GQEVLH--------QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360 (471)
Q Consensus 291 ~~~~l~~~-~~dg~i~iwd~~~-~~~~~~--------~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~ 360 (471)
+++.|+++ +.++.|.+||+.+ +..+.. +.++ ..+..++++++|+++++...++.|.+||. .++.+..+
T Consensus 192 dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 192 DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQI 269 (333)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEE
Confidence 99866554 4578999999964 332211 1222 46788999999998888878899999998 56666666
Q ss_pred cccCc------CEEEEEEcCCCCEEEEEeCCC
Q psy11350 361 EGHLK------SVFSVDFSPDGYHLATGSEDN 386 (471)
Q Consensus 361 ~~h~~------~v~~~~~sp~~~~l~s~s~dg 386 (471)
..+.. .+.+++|+|++..|+.++.++
T Consensus 270 ~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 270 LIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp ECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred EcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 54432 689999999987776665553
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.72 E-value=1.6e-15 Score=142.86 Aligned_cols=238 Identities=12% Similarity=0.036 Sum_probs=168.4
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT 232 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 232 (471)
..|.+++|++++..++..+.++.++.| .++....+..+...+.+++|+|++. +++++..++.|.+||..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~-----l~~~~~~~~~i~~~d~~~~~ 77 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQ-----LFLLDVFEGNIFKINPETKE 77 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSC-----EEEEETTTCEEEEECTTTCC
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCC-----EEEEECCCCEEEEEeCCCCc
Confidence 457788899998888777788999999 3566667777777889999999887 67778889999999998877
Q ss_pred ceeeecCCCCcceEEEEECCCCCEEEEEeCC----CeEEeccc---cc--ccc-CCCCcceEEEEECCCCCEEEEEec--
Q psy11350 233 PLANLEGHEPFRVSRIKFHPSGRFLGTCCWD----HSWRLDTP---LA--NLE-GHEPFRVSRIKFHPSGRFLGTCCW-- 300 (471)
Q Consensus 233 ~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d----~~~~~~~~---~~--~~~-~~~~~~v~~l~~~~~~~~l~~~~~-- 300 (471)
.......+. ..+.+++++|+|+++++...+ +.+..... .. .+. ......+..++++|+|+++++...
T Consensus 78 ~~~~~~~~~-~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 156 (333)
T 2dg1_A 78 IKRPFVSHK-ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGY 156 (333)
T ss_dssp EEEEEECSS-SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCB
T ss_pred EEEEeeCCC-CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecccc
Confidence 554442332 379999999999988877665 34333211 11 111 112346899999999987776553
Q ss_pred ----CCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEE-EEeCCCeEEEEeCCC-CeeEE--------EecccCcC
Q psy11350 301 ----DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVA-TGGLDAFGRVWDLRT-GRCIM--------FLEGHLKS 366 (471)
Q Consensus 301 ----dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~-t~~~dg~i~iwd~~~-~~~~~--------~~~~h~~~ 366 (471)
.+.|..||..+++... +..+...+..++|+|+++.|+ +.+.++.|++||+.+ +..+. .+.++ ..
T Consensus 157 ~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~ 234 (333)
T 2dg1_A 157 STNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EG 234 (333)
T ss_dssp TTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SE
T ss_pred ccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CC
Confidence 3567777776554433 222334578999999998554 445678999999964 33221 12222 46
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCccchhee
Q psy11350 367 VFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 367 v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
+..++++++|+++++...++.|.+||. +++.+..+
T Consensus 235 ~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 235 PDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQI 269 (333)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEE
T ss_pred CCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEE
Confidence 889999999998888888899999998 46555544
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.72 E-value=8.8e-16 Score=145.46 Aligned_cols=219 Identities=8% Similarity=0.042 Sum_probs=156.0
Q ss_pred cCeEEEEEecCCCEEEEEeCC---C--cEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeC--------
Q psy11350 153 RPISYCSFSPDSQHVATASWS---G--LCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ-------- 219 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~d---g--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~-------- 219 (471)
..+.+++|||||++||.++.+ + .|++|++.+++.......+ . +..+.|+|++. .|+.++.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~-----~l~~~~~~~~~~~~~ 131 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSR-----KLLIVGFKRREDEDF 131 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSS-----EEEEEEECCCC----
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCC-----EEEEEEccCCCcCCc
Confidence 467889999999999987743 2 4888899888766655444 3 99999999998 5666653
Q ss_pred -------------------CCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCC-------e---EEecc
Q psy11350 220 -------------------DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH-------S---WRLDT 270 (471)
Q Consensus 220 -------------------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~-------~---~~~~~ 270 (471)
...|.+||+.+++.+..+.. . .+..+.|+|+| +++++..+. . +.+..
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~ 207 (347)
T 2gop_A 132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWED 207 (347)
T ss_dssp -----CCCC---------CEEEEEEEETTTTEEEEEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEET
T ss_pred EEEcccceeecCcccccCccceEEEEECCCCeEEeeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeCC
Confidence 25789999988876344443 2 67899999999 777775542 2 22221
Q ss_pred -ccccccCCCCcceEEEEECCCCCEEEEEecC--------CeEEEEECCCCcEEEEeeCCCCCeEE-EEEeCCCCEEEEE
Q psy11350 271 -PLANLEGHEPFRVSRIKFHPSGRFLGTCCWD--------HSWRLWDLNQGQEVLHQEGHGKPVYC-MSFQGDGSVVATG 340 (471)
Q Consensus 271 -~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~v~~-~~~s~d~~~l~t~ 340 (471)
....+..+ ..+.. ++|+|++|+.++.+ ..|.+|| +++.......|...+.. +.|+ |+ +++++
T Consensus 208 ~~~~~l~~~--~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~ 279 (347)
T 2gop_A 208 GKEEKMFEK--VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTL 279 (347)
T ss_dssp TEEEEEEEE--ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEE
T ss_pred CceEEeccC--cceee--ECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEE
Confidence 11112222 23433 39999998887754 3688888 56555445566778886 9999 88 99999
Q ss_pred eCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcE-EEEECC
Q psy11350 341 GLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV-KIWDLR 394 (471)
Q Consensus 341 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i-~iwd~~ 394 (471)
+.++.++|| +.+++... +..+...|.+++|+| .++++++.++.. .||.+.
T Consensus 280 ~~~~~~~l~-~~~g~~~~-~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 280 FEEGSVNLY-IWDGEIKP-IAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EETTEEEEE-EESSSEEE-EECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred ecCCcEEEE-EcCCceEE-EecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 999999999 88666543 344577899999999 677787777765 778776
No 177
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=1.9e-15 Score=158.27 Aligned_cols=193 Identities=10% Similarity=0.064 Sum_probs=140.0
Q ss_pred CEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCc----ceEEEEECCCCCEEEEEeCCCe------
Q psy11350 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPF----RVSRIKFHPSGRFLGTCCWDHS------ 265 (471)
Q Consensus 196 ~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~i~~~~~d~~------ 265 (471)
...++.|+|++. +++++ ||+|++||+.++++...+..+... ....+.|||||++|++++.+..
T Consensus 18 ~~~~~~w~~dg~-----~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 18 KLYSLRWISDHE-----YLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCEEECSSSE-----EEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred cccccEECCCCc-----EEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 355899999997 67775 999999999999887777766532 2345899999999999887633
Q ss_pred ------EEeccc-cccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEe-eCCCCCe------------
Q psy11350 266 ------WRLDTP-LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPV------------ 325 (471)
Q Consensus 266 ------~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v------------ 325 (471)
|++... ...+..+ ...+...+|||||+.||.+. ++.|++||+.+++..... .++...+
T Consensus 91 ~~~~~~~d~~~~~~~~l~~~-~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITEERI-PNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp EEEEEEEETTTTEECCSSCC-CTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred ceEEEEEECCCCcEEEcccC-CCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence 222221 2233333 45799999999999999885 789999999887754422 2333323
Q ss_pred -----EEEEEeCCCCEEEEEeCCC------------------------------------eEEEEeCCC---Ce--eEEE
Q psy11350 326 -----YCMSFQGDGSVVATGGLDA------------------------------------FGRVWDLRT---GR--CIMF 359 (471)
Q Consensus 326 -----~~~~~s~d~~~l~t~~~dg------------------------------------~i~iwd~~~---~~--~~~~ 359 (471)
.++.|||||+.|+.++.|. .|++||+.+ ++ ....
T Consensus 169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~ 248 (740)
T 4a5s_A 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ 248 (740)
T ss_dssp TSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE
T ss_pred hcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE
Confidence 3489999999998875321 588899988 73 2223
Q ss_pred ec------ccCcCEEEEEEcCCCCEEEEEeC----CCcEEEEECCCcc
Q psy11350 360 LE------GHLKSVFSVDFSPDGYHLATGSE----DNAVKIWDLRKRR 397 (471)
Q Consensus 360 ~~------~h~~~v~~~~~sp~~~~l~s~s~----dg~i~iwd~~~~~ 397 (471)
+. +|...+..++|+|||+.++.... +..|.+||+.+++
T Consensus 249 l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 249 ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 33 37778999999999997665533 3469999999987
No 178
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=7.8e-15 Score=134.11 Aligned_cols=230 Identities=12% Similarity=0.059 Sum_probs=176.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceEEEeecCC-CCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCC
Q psy11350 163 DSQHVATASWSGLCKLWTVPECELVQTFRGHD-CNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241 (471)
Q Consensus 163 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 241 (471)
.+++|++++.++.|.+||..+|+.+..+..+. ..+.++.++|++. +++ +.++.|..||. +++.+..+....
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-----ilv--s~~~~V~~~d~-~G~~~W~~~~~~ 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-----ILF--SYSKGAKMITR-DGRELWNIAAPA 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-----EEE--ECBSEEEEECT-TSCEEEEEECCT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-----EEE--eCCCCEEEECC-CCCEEEEEcCCC
Confidence 46789999999999999999999999998776 4788999999997 566 45788999998 899999888765
Q ss_pred CcceEEEEECCCCCEEEEEeC-CCeEEeccccc----cc------cCCCCcceEEEEECCCCCEEEEEecCCeEEEEECC
Q psy11350 242 PFRVSRIKFHPSGRFLGTCCW-DHSWRLDTPLA----NL------EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN 310 (471)
Q Consensus 242 ~~~v~~~~~s~~~~~i~~~~~-d~~~~~~~~~~----~~------~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~ 310 (471)
...+.++.+.++|+++++.+. .+.+....+.. .+ ..+ ......+.+.++|+++++...++.|..||..
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~-~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERP-HAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSG-GGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcc-cccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 457899999999999999876 44432211110 11 111 1234556789999999999999999999998
Q ss_pred CCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccC------cCEEEEEEcCCCCEEEEEeC
Q psy11350 311 QGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL------KSVFSVDFSPDGYHLATGSE 384 (471)
Q Consensus 311 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~------~~v~~~~~sp~~~~l~s~s~ 384 (471)
++.+..+..+. ...++.+.++|+++++++.++.|..+|..+|+.+..+..+. ..+..++..++|.++++...
T Consensus 155 -G~~~w~~~~~~-~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~ 232 (276)
T 3no2_A 155 -GQLLNSVKLSG-TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQ 232 (276)
T ss_dssp -SCEEEEEECSS-CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEEC
T ss_pred -CCEEEEEECCC-CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEecc
Confidence 99888887653 45567888999999999888899999999999988886432 23788999999998888742
Q ss_pred C--------CcEEEEEC-CCccchheec
Q psy11350 385 D--------NAVKIWDL-RKRRLLKWCT 403 (471)
Q Consensus 385 d--------g~i~iwd~-~~~~~~~~~~ 403 (471)
. +..+++.+ .+++.+..+.
T Consensus 233 g~~~~~~~~~~~~~~~~~~~g~~~W~~~ 260 (276)
T 3no2_A 233 GHDREAGKGKHPQLVEIDSEGKVVWQLN 260 (276)
T ss_dssp TTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred CccccccccCCceEEEECCCCCEEEEec
Confidence 1 23456666 4666655443
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.69 E-value=2.6e-15 Score=155.21 Aligned_cols=233 Identities=12% Similarity=0.076 Sum_probs=159.6
Q ss_pred EEEEe--cCCCE-EEEEeC-CCcEEEEeCC--C-CceEEEeec-----CCCCEEEEEEeeCCCCCCccEEEEEeCC----
Q psy11350 157 YCSFS--PDSQH-VATASW-SGLCKLWTVP--E-CELVQTFRG-----HDCNVGAIEFHPLPSEGAVCSLASCAQD---- 220 (471)
Q Consensus 157 ~~~~s--~~~~~-l~tg~~-dg~i~iwd~~--~-~~~~~~~~~-----h~~~v~~l~~~~~~~~~~~~~l~s~~~d---- 220 (471)
...|+ |||++ |+.++. +..|++|++. + ++ ...+.. |...+..++|+|++. .|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~-----~l~~~~~~~~~~ 154 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERG-----EVWCMAEEFTGE 154 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTT-----EEEEEEEEECSS
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCC-----EEEEEEecccCC
Confidence 55565 99998 776654 5677777775 3 44 444554 667889999999998 68877776
Q ss_pred ------CcEEEEeCCC------Ccceeeec-CCCCcceEEEEECCCCCEEEEEeCCC--------eEEe---c-c----c
Q psy11350 221 ------GSVKLWSLDK------DTPLANLE-GHEPFRVSRIKFHPSGRFLGTCCWDH--------SWRL---D-T----P 271 (471)
Q Consensus 221 ------g~i~iwd~~~------~~~~~~~~-~~~~~~v~~~~~s~~~~~i~~~~~d~--------~~~~---~-~----~ 271 (471)
..|.+||+.+ +.. ..+. .+. ..+..++|+|||++|+.++.++ .+.+ . . .
T Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~ 232 (662)
T 3azo_A 155 GPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFAD 232 (662)
T ss_dssp STTCEEEEEEEEETTSTTTTCGGGS-EESSCSCS-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEE
T ss_pred CCCCceeEEEEEECCCCccccCCce-eEEEecCC-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccc
Confidence 5899999987 443 3343 333 3678899999999999887654 2222 2 1 1
Q ss_pred cccccCCCCcceEEEEECCCCCEEEEEecCC--eEEEEECCCCcEEEEeeCCCCC--------eEEEEEeCCCCEEEEEe
Q psy11350 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDH--SWRLWDLNQGQEVLHQEGHGKP--------VYCMSFQGDGSVVATGG 341 (471)
Q Consensus 272 ~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~--------v~~~~~s~d~~~l~t~~ 341 (471)
...+.......+..+.|+|+|+++++++.++ .|.+||+.+++.......+... +.+++|+|++.++++++
T Consensus 233 ~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 233 TRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp EEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred cEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence 2223332245789999999999888888888 6777777677654443333222 56789999999999998
Q ss_pred CCCeEEEE--eCCCCeeEEEecccCcCEEEE-EEcCCCCEEEEEeCCC--cEEEEECCCccch
Q psy11350 342 LDAFGRVW--DLRTGRCIMFLEGHLKSVFSV-DFSPDGYHLATGSEDN--AVKIWDLRKRRLL 399 (471)
Q Consensus 342 ~dg~i~iw--d~~~~~~~~~~~~h~~~v~~~-~~sp~~~~l~s~s~dg--~i~iwd~~~~~~~ 399 (471)
. +.++|| |+.+++ +..+..|...+..+ +++++.-++++++.+. .|.+||+.+++..
T Consensus 313 ~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 313 K-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp S-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred c-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 8 999999 655555 67777787778877 5544433444555554 4666677677643
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.68 E-value=6.6e-16 Score=148.92 Aligned_cols=232 Identities=13% Similarity=0.080 Sum_probs=154.2
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEE-------------------EEEeeCCCCCCccEEE
Q psy11350 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGA-------------------IEFHPLPSEGAVCSLA 215 (471)
Q Consensus 155 V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~-------------------l~~~~~~~~~~~~~l~ 215 (471)
...+.|+|||++|+.++.++.|++||+.+++....+..+...... +.|+|++. .++
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-----~~~ 157 (396)
T 3c5m_A 83 TFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS-----WEK 157 (396)
T ss_dssp TTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-----HHH
T ss_pred cccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCc-----cee
Confidence 334789999999999998999999999988877666655442222 23455554 233
Q ss_pred EE-----eCCCcEEEEeCCCCcceeeecCCCCcceEEEEECC-CCCEEEEEeCCCe-------EEec--c-ccccccCCC
Q psy11350 216 SC-----AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHS-------WRLD--T-PLANLEGHE 279 (471)
Q Consensus 216 s~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~i~~~~~d~~-------~~~~--~-~~~~~~~~~ 279 (471)
.+ ..+..|.+||+.+++....... ...+..+.|+| ++..|+..+.+.. +.+. . ....+..+.
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~ 235 (396)
T 3c5m_A 158 FAEFYHTNPTCRLIKVDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHA 235 (396)
T ss_dssp HHHHHHTCCCEEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCC
T ss_pred eeeeccCCCcceEEEEECCCCcEEeeccC--CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccC
Confidence 22 3567899999988876554432 23688999999 7887777664321 2221 1 112222221
Q ss_pred -CcceEEEEECCCCCEEEEEecC-----CeEEEEECCCCcEEEEeeCCCCCeEEEEEeC-CCCEEEEEe-----------
Q psy11350 280 -PFRVSRIKFHPSGRFLGTCCWD-----HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG-DGSVVATGG----------- 341 (471)
Q Consensus 280 -~~~v~~l~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~t~~----------- 341 (471)
...+..+.|+|+|++|+.++.+ +.|++||+.+++........ ... +.|+| ||+++++++
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 236 EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADAD 312 (396)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC--------
T ss_pred CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeecccc
Confidence 3357889999999988877654 45999999988654333221 233 89999 999888764
Q ss_pred -----CCCeEEEEeCCCCeeEEEecccCc-----------CEEEEEEcCCCCEEEEEeC-CCcEEEE--ECCCcc
Q psy11350 342 -----LDAFGRVWDLRTGRCIMFLEGHLK-----------SVFSVDFSPDGYHLATGSE-DNAVKIW--DLRKRR 397 (471)
Q Consensus 342 -----~dg~i~iwd~~~~~~~~~~~~h~~-----------~v~~~~~sp~~~~l~s~s~-dg~i~iw--d~~~~~ 397 (471)
.++.|++||+.+++.. .+..+.. .+..++|+|+|+.|+.++. ++...|| |+..++
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp --CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred ccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 3478999999887643 3444443 2567899999998887764 4555555 444443
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.68 E-value=7.6e-16 Score=160.02 Aligned_cols=238 Identities=10% Similarity=-0.044 Sum_probs=163.5
Q ss_pred cCCcCeEEEEEecCCCEEEEE-----eCCCcEEEEeCCCCceEEEeecCCCCE--EEEEEeeCCCCCCccEEEEEeCCCc
Q psy11350 150 GDTRPISYCSFSPDSQHVATA-----SWSGLCKLWTVPECELVQTFRGHDCNV--GAIEFHPLPSEGAVCSLASCAQDGS 222 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg-----~~dg~i~iwd~~~~~~~~~~~~h~~~v--~~l~~~~~~~~~~~~~l~s~~~dg~ 222 (471)
+|+..+.+++|||||++||.+ +.+..|++||+.+++.+. ..+...+ ..++|+|++. .|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~-----~l~~~~~d~~ 190 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSK-----GFYYEWLPTD 190 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSS-----EEEEEECCCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCC-----EEEEEEecCC
Confidence 577789999999999999843 344689999999988651 1111222 6899999998 6888888776
Q ss_pred -------------EEEEeCCCCcce--eeecCCC-CcceEEEEECCCCCEEEEEeCCC----eEEecc----ccccccCC
Q psy11350 223 -------------VKLWSLDKDTPL--ANLEGHE-PFRVSRIKFHPSGRFLGTCCWDH----SWRLDT----PLANLEGH 278 (471)
Q Consensus 223 -------------i~iwd~~~~~~~--~~~~~~~-~~~v~~~~~s~~~~~i~~~~~d~----~~~~~~----~~~~~~~~ 278 (471)
|++|++.++... ..+.... ...+..+.|+|||++|++++.++ .+.+.. ....+..+
T Consensus 191 ~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~ 270 (695)
T 2bkl_A 191 PSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKG 270 (695)
T ss_dssp TTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEEC
T ss_pred CCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecC
Confidence 999999887632 2333222 23688999999999998887665 222221 12223333
Q ss_pred CCcceEEEEECCCCCEEEEEec----CCeEEEEECCCCcE--EEEeeCC--CCCeEEEEEeCCCCEEEEEeCCCeEEEEe
Q psy11350 279 EPFRVSRIKFHPSGRFLGTCCW----DHSWRLWDLNQGQE--VLHQEGH--GKPVYCMSFQGDGSVVATGGLDAFGRVWD 350 (471)
Q Consensus 279 ~~~~v~~l~~~~~~~~l~~~~~----dg~i~iwd~~~~~~--~~~~~~~--~~~v~~~~~s~d~~~l~t~~~dg~i~iwd 350 (471)
.. .+....+ ++|. |+..+. ++.|.+||+.++.. ...+..+ ...+..++|+ ++.++++...|+..+||.
T Consensus 271 ~~-~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 271 VG-AKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp SS-CCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred CC-ceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEE
Confidence 22 3445556 5666 554443 57899999987653 2333333 4568888998 777888899999888876
Q ss_pred CC-CCeeEEEeccc-CcCEEEEEEcCCCCEEEEE----eCCCcEEEEECCCccc
Q psy11350 351 LR-TGRCIMFLEGH-LKSVFSVDFSPDGYHLATG----SEDNAVKIWDLRKRRL 398 (471)
Q Consensus 351 ~~-~~~~~~~~~~h-~~~v~~~~~sp~~~~l~s~----s~dg~i~iwd~~~~~~ 398 (471)
+. +++....+..+ .+.+..++++|++..++.. ...++|++||+.+++.
T Consensus 347 ~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 347 ATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 54 45566666655 6678889999998776633 2347899999988764
No 182
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.66 E-value=5.7e-14 Score=132.11 Aligned_cols=225 Identities=9% Similarity=0.056 Sum_probs=159.3
Q ss_pred CCCEEEEEEeeCCCCCCccEEEEEeCC------------------------CcEEEEeCCCCcceeeecCCCCcceEEEE
Q psy11350 194 DCNVGAIEFHPLPSEGAVCSLASCAQD------------------------GSVKLWSLDKDTPLANLEGHEPFRVSRIK 249 (471)
Q Consensus 194 ~~~v~~l~~~~~~~~~~~~~l~s~~~d------------------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~ 249 (471)
-+.+.+|+++|++. ++++...+ ++|.+||..+++.+..+....-.....++
T Consensus 23 l~~v~~va~d~~G~-----l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia 97 (329)
T 3fvz_A 23 PGQVSGVALDSKNN-----LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLS 97 (329)
T ss_dssp CSCEEEEEECTTCC-----EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEE
T ss_pred cCCceEEEECCCCC-----EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEE
Confidence 36789999999987 66666666 47999999888887766544434789999
Q ss_pred ECCCCCEEEEEeCCCeEEecccc------cccc--------CCCCcceEEEEECC-CCCEEEEEe-cCCeEEEEECCCCc
Q psy11350 250 FHPSGRFLGTCCWDHSWRLDTPL------ANLE--------GHEPFRVSRIKFHP-SGRFLGTCC-WDHSWRLWDLNQGQ 313 (471)
Q Consensus 250 ~s~~~~~i~~~~~d~~~~~~~~~------~~~~--------~~~~~~v~~l~~~~-~~~~l~~~~-~dg~i~iwd~~~~~ 313 (471)
++|+|+++++...++.+...... ..+. ...-.....++++| ++.++++.+ .++.|++|| .+++
T Consensus 98 ~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~ 176 (329)
T 3fvz_A 98 IDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGK 176 (329)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSC
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCC
Confidence 99999988888777776554322 1111 11122588999999 787777776 689999999 5666
Q ss_pred EEEEeeCC----------CCCeEEEEEeCC-CCEEEEEeCCCeEEEEeCCCCeeEEEec--ccCcCEEEEEEcCCCCEEE
Q psy11350 314 EVLHQEGH----------GKPVYCMSFQGD-GSVVATGGLDAFGRVWDLRTGRCIMFLE--GHLKSVFSVDFSPDGYHLA 380 (471)
Q Consensus 314 ~~~~~~~~----------~~~v~~~~~s~d-~~~l~t~~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~ 380 (471)
.+..+... -.....++++|+ +.++++...++.|++||..+++.+..+. .+...+.+++|+| +..++
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~ 255 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFA 255 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEE
Confidence 66665322 234789999998 7777888889999999999898888774 4567899999999 33333
Q ss_pred E-------EeCCCcEEEEECCCccchheecccC--CCccceeeccccceeeeec
Q psy11350 381 T-------GSEDNAVKIWDLRKRRLLKWCTQLL--PNSIGVTSLLTDLYIDVLE 425 (471)
Q Consensus 381 s-------~s~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~ 425 (471)
+ ...+..|++||+.+++.+..+.... .....-+++..+..+.+..
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad 309 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGD 309 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEE
Confidence 3 3345589999999999888764211 1222333445555444433
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.65 E-value=1.7e-14 Score=136.50 Aligned_cols=219 Identities=13% Similarity=0.107 Sum_probs=149.1
Q ss_pred CcCeEEEEEecCCCEEEEEe---------CCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCC--
Q psy11350 152 TRPISYCSFSPDSQHVATAS---------WSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD-- 220 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~---------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d-- 220 (471)
...+..+++ ||++|+... .++.|++||+.+++... + ..+..+.|+|++. .|+.++.+
T Consensus 14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~-----~la~~~~~~~ 81 (347)
T 2gop_A 14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGK-----KIAFMRANEE 81 (347)
T ss_dssp SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSS-----EEEEEEEETT
T ss_pred eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCC-----EEEEEEeccC
Confidence 345677788 898887642 25789999998887543 3 4678999999998 56666543
Q ss_pred -C--cEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCC---------------------------CeEEec-
Q psy11350 221 -G--SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---------------------------HSWRLD- 269 (471)
Q Consensus 221 -g--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d---------------------------~~~~~~- 269 (471)
+ .|.+|++.+++......... +..+.|+|+|+.|+.++.+ ..+.+.
T Consensus 82 ~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 82 KKVSEIWVADLETLSSKKILEAKN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp TTEEEEEEEETTTTEEEEEEEESE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred CCcceEEEEECCCCceEEEEcCCC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 3 37788888776554443322 8899999999999888743 112221
Q ss_pred --ccc--ccccCCCCcceEEEEECCCCCEEEEEecCC-------eEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEE
Q psy11350 270 --TPL--ANLEGHEPFRVSRIKFHPSGRFLGTCCWDH-------SWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVA 338 (471)
Q Consensus 270 --~~~--~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 338 (471)
... ..+.. . .+..+.|+|+| ++++++.++ ...||.+.+++ ...+..+ ..+..+ +|||++|+
T Consensus 159 ~~~~~~~~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--spdg~~l~ 230 (347)
T 2gop_A 159 TESEEVIEEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DSDGERIL 230 (347)
T ss_dssp TTTTEEEEEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EECSSCEE
T ss_pred CCCCeEEeeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CCCCCEEE
Confidence 111 22222 2 57789999999 777776542 33444433544 3444444 555554 99999888
Q ss_pred EEeCC--------CeEEEEeCCCCeeEEEecccCcCEEE-EEEcCCCCEEEEEeCCCcEEEEECCCccc
Q psy11350 339 TGGLD--------AFGRVWDLRTGRCIMFLEGHLKSVFS-VDFSPDGYHLATGSEDNAVKIWDLRKRRL 398 (471)
Q Consensus 339 t~~~d--------g~i~iwd~~~~~~~~~~~~h~~~v~~-~~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 398 (471)
.++.+ ..|++|| +++.......|...+.. +.|+ ++ ++++++.++.++|| +.+++.
T Consensus 231 ~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 231 LYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI 294 (347)
T ss_dssp EEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE
T ss_pred EEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce
Confidence 77644 4688888 66655555566778886 9999 88 89999999999999 886554
No 184
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.64 E-value=1.4e-13 Score=128.13 Aligned_cols=239 Identities=13% Similarity=0.027 Sum_probs=167.5
Q ss_pred cCCcCeEEEEEecCCCEEEE-------EeCCCcEEEEeCCCCceEEEee----cCCCCEEEEEEeeC-CCCCCccEEEEE
Q psy11350 150 GDTRPISYCSFSPDSQHVAT-------ASWSGLCKLWTVPECELVQTFR----GHDCNVGAIEFHPL-PSEGAVCSLASC 217 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~t-------g~~dg~i~iwd~~~~~~~~~~~----~h~~~v~~l~~~~~-~~~~~~~~l~s~ 217 (471)
+.-....+++|+++|.++++ +..++.|.+||..+++...... ++...+.+++++++ +. |..+
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~------l~v~ 88 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ------LFVA 88 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE------EEEE
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc------EEEE
Confidence 34456789999999988877 5668999999988877643322 14467899999998 64 5555
Q ss_pred eCCCcEEEEeCCCCcceee-ecC---CCCcceEEEEECCCCCEEEEEeCC---------------Ce-EEecccc--ccc
Q psy11350 218 AQDGSVKLWSLDKDTPLAN-LEG---HEPFRVSRIKFHPSGRFLGTCCWD---------------HS-WRLDTPL--ANL 275 (471)
Q Consensus 218 ~~dg~i~iwd~~~~~~~~~-~~~---~~~~~v~~~~~s~~~~~i~~~~~d---------------~~-~~~~~~~--~~~ 275 (471)
+..+.|.+||.. ++.... ... .....+.+++++++|+++++...+ +. +.+.... ..+
T Consensus 89 ~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~ 167 (314)
T 1pjx_A 89 DMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQV 167 (314)
T ss_dssp ETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEE
T ss_pred ECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEe
Confidence 555579999987 654332 221 112358899999999888777654 22 3332211 111
Q ss_pred cCCCCcceEEEEEC----CCCCEEEEE-ecCCeEEEEECC-CCcE-----EEEeeCCC-CCeEEEEEeCCCCEEEEEeCC
Q psy11350 276 EGHEPFRVSRIKFH----PSGRFLGTC-CWDHSWRLWDLN-QGQE-----VLHQEGHG-KPVYCMSFQGDGSVVATGGLD 343 (471)
Q Consensus 276 ~~~~~~~v~~l~~~----~~~~~l~~~-~~dg~i~iwd~~-~~~~-----~~~~~~~~-~~v~~~~~s~d~~~l~t~~~d 343 (471)
..+ ......++|+ |+++.|+++ ..++.|.+||+. +++. ...+..+. ..+..++++++|.++++...+
T Consensus 168 ~~~-~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 168 DTA-FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp EEE-ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred ccC-CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC
Confidence 111 1246789999 999766655 467899999986 4432 22333343 567899999999988888888
Q ss_pred CeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEE-EEEeCCCcEEEEECCCc
Q psy11350 344 AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL-ATGSEDNAVKIWDLRKR 396 (471)
Q Consensus 344 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l-~s~s~dg~i~iwd~~~~ 396 (471)
+.|.+||..+++.+..+..+...+.+++|+|+|+.| ++...++.|..|++...
T Consensus 247 ~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 247 SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 999999998787777777676789999999999955 45556688999998753
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.64 E-value=6.7e-14 Score=131.55 Aligned_cols=236 Identities=9% Similarity=-0.016 Sum_probs=166.1
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcc
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP 233 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 233 (471)
....+.+. +++++++...++.|.+||..+++.+.++.. ......+++++++. ++++...++.|.+||..+++.
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~-----lyv~~~~~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEK-----AYVTQIWDYRIFIINPKTYEI 117 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTE-----EEEEEBSCSEEEEEETTTTEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCe-----EEEEECCCCeEEEEECCCCeE
Confidence 35666664 344455555679999999999999888864 46788999999874 455554899999999999887
Q ss_pred eeeecCCCCc----ceEEEEECCCCCEEEEEe--CCCeEEeccc-----cccccCCCCcceEEEEECCCCCEEEEEecC-
Q psy11350 234 LANLEGHEPF----RVSRIKFHPSGRFLGTCC--WDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLGTCCWD- 301 (471)
Q Consensus 234 ~~~~~~~~~~----~v~~~~~s~~~~~i~~~~--~d~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d- 301 (471)
...+...... ....+++ ++..++++. .++.+.+... ...+.. ......+.++|+|++++++..+
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~~ 193 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI--GIQPTSLVMDKYNKMWTITDGGY 193 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC--SSCBCCCEECTTSEEEEEBCCBC
T ss_pred EEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc--CCCccceEEcCCCCEEEEECCCc
Confidence 7766543311 3456666 455555554 3555443211 112221 2235678999999877776655
Q ss_pred ---------CeEEEEECCCCcEEEEeeCC-CCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEE--ecccCcCEEE
Q psy11350 302 ---------HSWRLWDLNQGQEVLHQEGH-GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF--LEGHLKSVFS 369 (471)
Q Consensus 302 ---------g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~--~~~h~~~v~~ 369 (471)
+.|.+||..+++....+... ......++|+|+++.|+++.. .|.+||..+++.... +..+.....+
T Consensus 194 ~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~g 271 (328)
T 3dsm_A 194 EGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYG 271 (328)
T ss_dssp TTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEE
T ss_pred cCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEE
Confidence 78999999998877666532 346789999999998888765 899999988875321 2222467899
Q ss_pred EEEcC-CCCEEEEE----eCCCcEEEEECCCccchheec
Q psy11350 370 VDFSP-DGYHLATG----SEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 370 ~~~sp-~~~~l~s~----s~dg~i~iwd~~~~~~~~~~~ 403 (471)
++++| ++.++++. ..++.|.+||.. ++.+.++.
T Consensus 272 i~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 272 LTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp EEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred EEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 99999 56666666 678999999998 88887764
No 186
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.64 E-value=2.5e-12 Score=118.63 Aligned_cols=237 Identities=8% Similarity=-0.102 Sum_probs=169.4
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEe-ecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeC
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTF-RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL 228 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 228 (471)
.+...+.+++++++|+++++...++.|.+||.. ++..... ..+...+.++++.+++. ++++...++.|..|+.
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-----l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-----VWFTENAANKIGRITK 85 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-----EEEEETTTTEEEEECT
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-----EEEeCCCCCeEEEECC
Confidence 455789999999999977776668899999987 5543322 23456789999999886 5666666788999997
Q ss_pred CCCcceeeecC-CCCcceEEEEECCCCCEEEEEeCCCeEEeccccc---ccc-CCCCcceEEEEECCCCCEEEEEecCCe
Q psy11350 229 DKDTPLANLEG-HEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA---NLE-GHEPFRVSRIKFHPSGRFLGTCCWDHS 303 (471)
Q Consensus 229 ~~~~~~~~~~~-~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~---~~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~ 303 (471)
. ++ ...+.. .....+..+++.++|..+++...++.+....+.. .+. ......+..+++.++++.+++...++.
T Consensus 86 ~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 86 K-GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp T-SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred C-Cc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence 5 33 222322 1233789999999998877776665543322211 111 111345889999999987777767789
Q ss_pred EEEEECCCCcEEEE-eeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEE-ecccCcCEEEEEEcCCCCEEEE
Q psy11350 304 WRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF-LEGHLKSVFSVDFSPDGYHLAT 381 (471)
Q Consensus 304 i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~~~~sp~~~~l~s 381 (471)
|..||. +++.... ...+...+.+++++++|.++++...++.|.+||. +++.... +..+...+.+++++++|+++++
T Consensus 164 i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 164 IGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEe
Confidence 999999 6655432 3334566889999999998777777889999998 6654332 3345567999999999997777
Q ss_pred EeCCCcEEEEECCCcc
Q psy11350 382 GSEDNAVKIWDLRKRR 397 (471)
Q Consensus 382 ~s~dg~i~iwd~~~~~ 397 (471)
...++.|..||. +++
T Consensus 242 ~~~~~~i~~~d~-~g~ 256 (299)
T 2z2n_A 242 EWGANKIGRLTS-NNI 256 (299)
T ss_dssp ETTTTEEEEEET-TTE
T ss_pred ccCCceEEEECC-CCc
Confidence 667889999998 443
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.62 E-value=3.2e-14 Score=135.51 Aligned_cols=214 Identities=12% Similarity=0.069 Sum_probs=151.6
Q ss_pred cCeEEEEEecCCCEEEEEeC--CCcEEEEeCCCCceEEE-eecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCC
Q psy11350 153 RPISYCSFSPDSQHVATASW--SGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD 229 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~--dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 229 (471)
.....++|+|||++|+++.. ++.|.+||+.+++.+.. +... ....+.+.|.+.. .+++.+.||.+.+|++.
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~----~~~~~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPR----SFMTICGDGGLLTINLG 181 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSS----EEEEEETTSSEEEEEEC
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCe----eEEEECCCCcEEEEEEC
Confidence 45667899999999998874 58999999999988887 6532 2234667787643 68889999999999986
Q ss_pred C-Ccceee------ecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc-------ccc---------cCCCCcceEEE
Q psy11350 230 K-DTPLAN------LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL-------ANL---------EGHEPFRVSRI 286 (471)
Q Consensus 230 ~-~~~~~~------~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~-------~~~---------~~~~~~~v~~l 286 (471)
. ++.... +.... ....+.+++++..++..+.++.+...... ..+ .+..+.....+
T Consensus 182 ~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKD--DPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp TTSSEEEEEECCCCSCTTT--SCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred CCCcEeeeccccceEcCCC--CceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEE
Confidence 5 443311 11111 11122334556666655555553332110 000 00001112237
Q ss_pred EECCCCCEEEEEec-----------CCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCC-
Q psy11350 287 KFHPSGRFLGTCCW-----------DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG- 354 (471)
Q Consensus 287 ~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~- 354 (471)
+|+|+++.++++.. .+.|.+||+.+++.+..+..+. +.+++|+|||++|++++. +.|.+||..++
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~ 336 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPE 336 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSS
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCc
Confidence 89999888887654 3589999999999999988777 899999999999998887 99999999999
Q ss_pred -eeEEEecccCcCEEEEEEcCCCC
Q psy11350 355 -RCIMFLEGHLKSVFSVDFSPDGY 377 (471)
Q Consensus 355 -~~~~~~~~h~~~v~~~~~sp~~~ 377 (471)
+.+.++..+......++++|+|+
T Consensus 337 l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 337 PKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CEEEEEETTSCSSEEEEEECCCSC
T ss_pred ceeeEEeccCCCCcEEEEecCCCC
Confidence 99999877778899999999986
No 188
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.61 E-value=7e-13 Score=121.87 Aligned_cols=203 Identities=11% Similarity=0.148 Sum_probs=147.1
Q ss_pred cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCC-----CCcceEEEEE-CCCCCEEEEEeC-CC
Q psy11350 192 GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH-----EPFRVSRIKF-HPSGRFLGTCCW-DH 264 (471)
Q Consensus 192 ~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~v~~~~~-s~~~~~i~~~~~-d~ 264 (471)
++-..+.++++++++. ++++...++.|.+||.. ++.+..+... ....+..+++ .+++..+++... ++
T Consensus 27 g~~~~p~~v~~~~~g~-----l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~ 100 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQND-----IIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTH 100 (286)
T ss_dssp TCBSCEEEEEECTTCC-----EEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGC
T ss_pred CccCCCceEEECCCCC-----EEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCC
Confidence 3446788999999886 67777889999999986 6555555421 1136789999 577776666643 55
Q ss_pred eEEecccc----ccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee--CCCCCeEEEEEeCCCCEEE
Q psy11350 265 SWRLDTPL----ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE--GHGKPVYCMSFQGDGSVVA 338 (471)
Q Consensus 265 ~~~~~~~~----~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~d~~~l~ 338 (471)
.+.+.... ..+.......+.+++++|+|+++++...++.|.+||.. ++.+..+. .+...+.+++++|+|++++
T Consensus 101 ~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v 179 (286)
T 1q7f_A 101 QIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFI 179 (286)
T ss_dssp EEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEE
T ss_pred EEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEE
Confidence 55443221 12222223468899999999988777778999999964 55555553 3456789999999999888
Q ss_pred EEeCCCeEEEEeCCCCeeEEEeccc--CcCEEEEEEcCCCCEEEEEeCCC-cEEEEECCCccchheec
Q psy11350 339 TGGLDAFGRVWDLRTGRCIMFLEGH--LKSVFSVDFSPDGYHLATGSEDN-AVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 339 t~~~dg~i~iwd~~~~~~~~~~~~h--~~~v~~~~~sp~~~~l~s~s~dg-~i~iwd~~~~~~~~~~~ 403 (471)
+...++.|++||. .++.+..+..+ ...+.+++++|+|+++++...++ .|.+||. +++.+..+.
T Consensus 180 ~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~ 245 (286)
T 1q7f_A 180 SDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALE 245 (286)
T ss_dssp EEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEE
T ss_pred EECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEc
Confidence 8888999999997 55666666533 36789999999999888888776 9999995 466555554
No 189
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.59 E-value=9.7e-14 Score=145.23 Aligned_cols=238 Identities=13% Similarity=0.025 Sum_probs=159.3
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCC-----CcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCc--
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWS-----GLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGS-- 222 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~d-----g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~-- 222 (471)
+|...+..++|||||++||.++.+ ..|++||+.+++.+... .+...+..++|+|+ . .|+.++.++.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~-----~l~~~~~~~~~~ 232 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-D-----ALLYSRFAEPKE 232 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-S-----EEEEEECCCC--
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-C-----EEEEEEecCccc
Confidence 455578899999999999877643 36999999999876532 12222357899999 7 5777766554
Q ss_pred ------------EEEEeCCCCcc--eeeecCCC-CcceEEEEECCCCCEEEEEeCCC-----eEEe---ccc----cccc
Q psy11350 223 ------------VKLWSLDKDTP--LANLEGHE-PFRVSRIKFHPSGRFLGTCCWDH-----SWRL---DTP----LANL 275 (471)
Q Consensus 223 ------------i~iwd~~~~~~--~~~~~~~~-~~~v~~~~~s~~~~~i~~~~~d~-----~~~~---~~~----~~~~ 275 (471)
|.+|++.++.. ...+.... ...+..+.|+|||++|+..+.++ .+.+ ... ...+
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l 312 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTAL 312 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEE
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEe
Confidence 88999977753 22333322 12478999999999998887654 2222 222 3344
Q ss_pred cCCCCcceEEEEECCCCCEEEEEecC----CeEEEEECCCC--cEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEE
Q psy11350 276 EGHEPFRVSRIKFHPSGRFLGTCCWD----HSWRLWDLNQG--QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349 (471)
Q Consensus 276 ~~~~~~~v~~l~~~~~~~~l~~~~~d----g~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iw 349 (471)
..+.. .+... ++|+|+.|+..+.+ +.|.+||+.++ +....+..+...+..++|+ ++.++++...|+..+||
T Consensus 313 ~~~~~-~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~ 389 (741)
T 1yr2_A 313 IPDLK-AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVL 389 (741)
T ss_dssp ECSSS-SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEE
T ss_pred cCCCC-ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEE
Confidence 44433 23333 34889988887764 45999999875 3333344445556778887 66788888889887777
Q ss_pred eCC-CCeeEEEecc-cCcCEEEEEEcCCCCEEE-EEe---CCCcEEEEECCCcc
Q psy11350 350 DLR-TGRCIMFLEG-HLKSVFSVDFSPDGYHLA-TGS---EDNAVKIWDLRKRR 397 (471)
Q Consensus 350 d~~-~~~~~~~~~~-h~~~v~~~~~sp~~~~l~-s~s---~dg~i~iwd~~~~~ 397 (471)
.+. ++.....+.. +.+.+..+.++|++..|+ +.+ ..++|++||+.+++
T Consensus 390 ~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 390 AFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 544 4556666654 357789999999887555 322 34789999998876
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.59 E-value=2e-12 Score=129.63 Aligned_cols=197 Identities=11% Similarity=0.022 Sum_probs=149.7
Q ss_pred ecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCC--CCcceeeec
Q psy11350 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD--KDTPLANLE 238 (471)
Q Consensus 161 s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~ 238 (471)
+|.+.++++...++.|.++|..+++.+..+... ..+..+.|+|++. ++++++.|+.|.+||+. +++.+..+.
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr-----~lyv~~~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGR-----YLFVIGRDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSC-----EEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCC-----EEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence 354556677778899999999999999888753 3567999999998 78888999999999995 665555444
Q ss_pred CCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEEC----CCCCEEEEEec-CCeEEEEECCCCc
Q psy11350 239 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFH----PSGRFLGTCCW-DHSWRLWDLNQGQ 313 (471)
Q Consensus 239 ~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~~~l~~~~~-dg~i~iwd~~~~~ 313 (471)
... ....++|+ |+|+++++++. +++|.++|..+.+
T Consensus 238 ~G~----------------------------------------~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 238 IGS----------------------------------------EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp CCS----------------------------------------EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred cCC----------------------------------------CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 321 35788999 69998887765 5899999999998
Q ss_pred EEEEeeCC-----------CCCeEEEEEeCCCC-EEEEEeCCCeEEEEeCCCCeeE--EEecccCcCEEEEEEcCCCCEE
Q psy11350 314 EVLHQEGH-----------GKPVYCMSFQGDGS-VVATGGLDAFGRVWDLRTGRCI--MFLEGHLKSVFSVDFSPDGYHL 379 (471)
Q Consensus 314 ~~~~~~~~-----------~~~v~~~~~s~d~~-~l~t~~~dg~i~iwd~~~~~~~--~~~~~h~~~v~~~~~sp~~~~l 379 (471)
.+..+... ...+..+.+++++. +++....+|.|.++|..+.+.+ ..+ ........+.|+|+|++|
T Consensus 278 ~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~ 356 (567)
T 1qks_A 278 PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYF 356 (567)
T ss_dssp EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEE
T ss_pred EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEE
Confidence 88776421 12577888898765 4455556799999998775432 222 233457789999999988
Q ss_pred EEEe-CCCcEEEEECCCccchheecc
Q psy11350 380 ATGS-EDNAVKIWDLRKRRLLKWCTQ 404 (471)
Q Consensus 380 ~s~s-~dg~i~iwd~~~~~~~~~~~~ 404 (471)
+++. .++.|.++|+.+++++..+..
T Consensus 357 ~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 357 ITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred EEEeCCCCeEEEEECCCCcEEEEEec
Confidence 7665 578999999999998877654
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.59 E-value=6.4e-13 Score=122.82 Aligned_cols=208 Identities=10% Similarity=0.035 Sum_probs=146.0
Q ss_pred ceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCC
Q psy11350 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264 (471)
Q Consensus 185 ~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~ 264 (471)
..+..+..+.....+++|+|++.. +++++..++.|..|+..++ ...+..+.. .+.+++++|+|+++++...++
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~----l~~~~~~~~~i~~~~~~~~--~~~~~~~~~-~~~~l~~~~dg~l~v~~~~~~ 90 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSA----VIFSDVRQNRTWAWSDDGQ--LSPEMHPSH-HQNGHCLNKQGHLIACSHGLR 90 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTE----EEEEEGGGTEEEEEETTSC--EEEEESSCS-SEEEEEECTTCCEEEEETTTT
T ss_pred CcEEEEecCCccccCCeEeCCCCE----EEEEeCCCCEEEEEECCCC--eEEEECCCC-CcceeeECCCCcEEEEecCCC
Confidence 344455555667889999999863 5778888999999999876 555554443 789999999999887776655
Q ss_pred eEEeccc-cc---ccc----CCCCcceEEEEECCCCCEEEE----Ee-------------cCCeEEEEECCCCcEEEEee
Q psy11350 265 SWRLDTP-LA---NLE----GHEPFRVSRIKFHPSGRFLGT----CC-------------WDHSWRLWDLNQGQEVLHQE 319 (471)
Q Consensus 265 ~~~~~~~-~~---~~~----~~~~~~v~~l~~~~~~~~l~~----~~-------------~dg~i~iwd~~~~~~~~~~~ 319 (471)
.+..... .. .+. ......+..++++|+|+++++ ++ ..+.|..++.. ++ +..+.
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~ 168 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPI 168 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEE
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEee
Confidence 5444322 11 111 111124567999999998887 33 13466666665 43 44455
Q ss_pred CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCC-CCee---EEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR-TGRC---IMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 320 ~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~-~~~~---~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
.+......++|+|+++.+++.+.++.|++|++. +++. ...+..+...+.+++++++|+++++. ++.|.+||..
T Consensus 169 ~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~- 245 (296)
T 3e5z_A 169 RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD- 245 (296)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-
T ss_pred cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-
Confidence 566778999999999988777788999999987 5544 23333455667889999999977666 7889999986
Q ss_pred ccchheecc
Q psy11350 396 RRLLKWCTQ 404 (471)
Q Consensus 396 ~~~~~~~~~ 404 (471)
++.+..+..
T Consensus 246 g~~~~~~~~ 254 (296)
T 3e5z_A 246 GDELGRVLT 254 (296)
T ss_dssp SCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 666665543
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.58 E-value=4.7e-13 Score=139.43 Aligned_cols=236 Identities=14% Similarity=0.048 Sum_probs=158.2
Q ss_pred cCCCEEEEEeCC-----CcEEEEeCCCCceEEEee------cCCCCEEEEEEeeCCCCCCccEEEEEeCC-C----cEEE
Q psy11350 162 PDSQHVATASWS-----GLCKLWTVPECELVQTFR------GHDCNVGAIEFHPLPSEGAVCSLASCAQD-G----SVKL 225 (471)
Q Consensus 162 ~~~~~l~tg~~d-----g~i~iwd~~~~~~~~~~~------~h~~~v~~l~~~~~~~~~~~~~l~s~~~d-g----~i~i 225 (471)
|+|++++....+ +.|++.+..+++....+. +|...+..++|+|++. +|+.+..+ | .|++
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~-----~la~~~~~~G~~~~~i~v 155 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGE-----YFAYGLSASGSDWVTIKF 155 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSS-----EEEEEEEETTCSCEEEEE
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCC-----EEEEEEcCCCCceEEEEE
Confidence 888887755432 244555555554433222 2444688999999998 56655443 3 8999
Q ss_pred EeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCe----------------EEe---cccc----ccccCC-CCc
Q psy11350 226 WSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS----------------WRL---DTPL----ANLEGH-EPF 281 (471)
Q Consensus 226 wd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~----------------~~~---~~~~----~~~~~~-~~~ 281 (471)
||+.+++......... .+..++|+|||+.|+.++.++. +.+ .+.. ..+... ...
T Consensus 156 ~d~~tg~~~~~~~~~~--~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~ 233 (710)
T 2xdw_A 156 MKVDGAKELPDVLERV--KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPK 233 (710)
T ss_dssp EETTTTEEEEEEEEEE--CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTT
T ss_pred EECCCCCCCcccccCc--ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCe
Confidence 9999988765332221 3567999999999999887643 332 2221 111221 133
Q ss_pred ceEEEEECCCCCEEEEEec-----CCeEEEEECCC------Cc-EEEEeeCCCCCeEEEEEeCCCCEEEEEeCC----Ce
Q psy11350 282 RVSRIKFHPSGRFLGTCCW-----DHSWRLWDLNQ------GQ-EVLHQEGHGKPVYCMSFQGDGSVVATGGLD----AF 345 (471)
Q Consensus 282 ~v~~l~~~~~~~~l~~~~~-----dg~i~iwd~~~------~~-~~~~~~~~~~~v~~~~~s~d~~~l~t~~~d----g~ 345 (471)
.+..+.|+|+|++|+.++. +..|++||+.+ +. ....+..+...+.. .|+|+|..|+..+.. +.
T Consensus 234 ~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~ 312 (710)
T 2xdw_A 234 WMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYR 312 (710)
T ss_dssp CEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCE
T ss_pred EEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCE
Confidence 4789999999999988765 56899999986 43 35566666666655 488888877766543 36
Q ss_pred EEEEeCCCCe--eEEEecccCc--CEEEEEEcCCCCEEEEEeCCCc--EEEEECCCccchheeccc
Q psy11350 346 GRVWDLRTGR--CIMFLEGHLK--SVFSVDFSPDGYHLATGSEDNA--VKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 346 i~iwd~~~~~--~~~~~~~h~~--~v~~~~~sp~~~~l~s~s~dg~--i~iwd~~~~~~~~~~~~~ 405 (471)
|.+||+.++. ....+..|.. .+..++|++++.++++...|+. |.+||+.+++.+..+..+
T Consensus 313 l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~ 378 (710)
T 2xdw_A 313 LINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE 378 (710)
T ss_dssp EEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC
T ss_pred EEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC
Confidence 9999998774 2344444544 6888999988888888888885 666787777766655543
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.57 E-value=1e-11 Score=114.38 Aligned_cols=235 Identities=7% Similarity=-0.144 Sum_probs=162.2
Q ss_pred CCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEee--cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeC
Q psy11350 151 DTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR--GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL 228 (471)
Q Consensus 151 h~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 228 (471)
+...+.+++++++|.++++...++.|..|+.. ++. ..+. .....+.++++.+++. ++++...++.|.+||.
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~-----l~v~~~~~~~i~~~d~ 127 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGD-----IWFTEMNGNRIGRITD 127 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSC-----EEEEETTTTEEEEECT
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCC-----EEEEecCCceEEEECC
Confidence 45678999999999988877768899999976 443 2232 3456789999999876 5666667889999998
Q ss_pred CCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccc---cc-cCCCCcceEEEEECCCCCEEEEEecCCeE
Q psy11350 229 DKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA---NL-EGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304 (471)
Q Consensus 229 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~---~~-~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 304 (471)
+++............+..+++.++|..+++...++.+....... .+ .......+.+++++++++.+++...++.|
T Consensus 128 -~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 206 (299)
T 2z2n_A 128 -DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKI 206 (299)
T ss_dssp -TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred -CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceE
Confidence 55443322222233689999999998777766555543322211 11 11113358899999999877666668899
Q ss_pred EEEECCCCcEEEE-eeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEE-ecccCcCEEEEEEcCCCCEEEEE
Q psy11350 305 RLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF-LEGHLKSVFSVDFSPDGYHLATG 382 (471)
Q Consensus 305 ~iwd~~~~~~~~~-~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~~~~sp~~~~l~s~ 382 (471)
.+||. +++.... ...+...+.+++++++|.++++...++.|.+||. ++..... +..+...+.++++ ++|.++++.
T Consensus 207 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~ 283 (299)
T 2z2n_A 207 GRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAM 283 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEE
T ss_pred EEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEe
Confidence 99999 6654332 2334567899999999997777667889999998 4543322 3345567999999 888877766
Q ss_pred eCCCcEEEEECCCcc
Q psy11350 383 SEDNAVKIWDLRKRR 397 (471)
Q Consensus 383 s~dg~i~iwd~~~~~ 397 (471)
+ .+.|..++.++++
T Consensus 284 ~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 284 E-CDKIGKLTLIKDN 297 (299)
T ss_dssp T-TTEEEEEEEC---
T ss_pred c-CCcEEEEEcCccc
Confidence 5 5677778877654
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.57 E-value=7.2e-12 Score=125.61 Aligned_cols=237 Identities=11% Similarity=-0.019 Sum_probs=168.1
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCC--CCceEEEeecCCCCEEEEEEe----eCCCCCCccEEEEEeCCCcEEEEe
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVP--ECELVQTFRGHDCNVGAIEFH----PLPSEGAVCSLASCAQDGSVKLWS 227 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~l~~~----~~~~~~~~~~l~s~~~dg~i~iwd 227 (471)
.+..+.|||||++|++++.++.|.+||+. +++.+..+.... ....++|+ |++.. ++++...+++|.++|
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~----l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKY----AIAGAYWPPQYVIMD 272 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTE----EEEEEEETTEEEEEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCE----EEEEEccCCeEEEEE
Confidence 56789999999999999999999999996 888888887643 45799999 68873 445555679999999
Q ss_pred CCCCcceeeecCC----------CCcceEEEEECCCCCEEEEEe-CCCeEEecccc-----ccccCCCCcceEEEEECCC
Q psy11350 228 LDKDTPLANLEGH----------EPFRVSRIKFHPSGRFLGTCC-WDHSWRLDTPL-----ANLEGHEPFRVSRIKFHPS 291 (471)
Q Consensus 228 ~~~~~~~~~~~~~----------~~~~v~~~~~s~~~~~i~~~~-~d~~~~~~~~~-----~~~~~~~~~~v~~l~~~~~ 291 (471)
..+.+.+..+... ....+..+..++++..+++.. ..+.+.+.... .............+.|+|+
T Consensus 273 ~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pd 352 (567)
T 1qks_A 273 GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGS 352 (567)
T ss_dssp TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTT
T ss_pred CCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCC
Confidence 9999888776532 122677888899877655544 33553331110 0000011224668899999
Q ss_pred CCEEEEEe-cCCeEEEEECCCCcEEEEeeC-----CCCCeEEEEEeCCCCE-EEEEe-CCCeEEEEeCCC-------Cee
Q psy11350 292 GRFLGTCC-WDHSWRLWDLNQGQEVLHQEG-----HGKPVYCMSFQGDGSV-VATGG-LDAFGRVWDLRT-------GRC 356 (471)
Q Consensus 292 ~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~s~d~~~-l~t~~-~dg~i~iwd~~~-------~~~ 356 (471)
+++|+++. .++.|.++|+.+++.+..+.. |.+.-..+ ++|++.. ++++. .++.|.++|..+ .+.
T Consensus 353 gr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kv 431 (567)
T 1qks_A 353 HRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKI 431 (567)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEE
Confidence 99987766 578999999999987766543 32222222 5787544 44443 468999999987 667
Q ss_pred EEEecccCcCEEEEEEcCCCCEEEEEeC-------CCcEEEEECCCc
Q psy11350 357 IMFLEGHLKSVFSVDFSPDGYHLATGSE-------DNAVKIWDLRKR 396 (471)
Q Consensus 357 ~~~~~~h~~~v~~~~~sp~~~~l~s~s~-------dg~i~iwd~~~~ 396 (471)
+.++......-..+..+|+++++.+... .++|.++|+.+.
T Consensus 432 v~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 432 LDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 7887755444455789999999988763 459999999877
No 195
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.57 E-value=8.4e-13 Score=124.00 Aligned_cols=215 Identities=9% Similarity=-0.008 Sum_probs=152.0
Q ss_pred CCCcEEEEeCCCCceEEEee------cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcce
Q psy11350 172 WSGLCKLWTVPECELVQTFR------GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245 (471)
Q Consensus 172 ~dg~i~iwd~~~~~~~~~~~------~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v 245 (471)
.++.|.+||..+++....+. ........+.+.. +. ++++...++.|.+||..+++.+..+... ...
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~-----lyv~~~~~~~v~viD~~t~~~~~~i~~~--~~p 86 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-GI-----GWIVVNNSHVIFAIDINTFKEVGRITGF--TSP 86 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-TE-----EEEEEGGGTEEEEEETTTCCEEEEEECC--SSE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-CE-----EEEEEcCCCEEEEEECcccEEEEEcCCC--CCC
Confidence 37899999999988765442 1123456777743 32 5666667899999999999988888533 368
Q ss_pred EEEEECCCCCEEEEEeCCCeEEeccc-----cccccCCC----CcceEEEEECCCCCEEEEEe--cCCeEEEEECCCCcE
Q psy11350 246 SRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHE----PFRVSRIKFHPSGRFLGTCC--WDHSWRLWDLNQGQE 314 (471)
Q Consensus 246 ~~~~~s~~~~~i~~~~~d~~~~~~~~-----~~~~~~~~----~~~v~~l~~~~~~~~l~~~~--~dg~i~iwd~~~~~~ 314 (471)
..++++++++.+++...++.+.+... ...+.... ......+++ ++..++++. .++.|.+||+.+++.
T Consensus 87 ~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~ 164 (328)
T 3dsm_A 87 RYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKV 164 (328)
T ss_dssp EEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEE
T ss_pred cEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeE
Confidence 89999999854444436666444221 11111111 013456777 455565555 488999999999988
Q ss_pred EEEeeCCCCCeEEEEEeCCCCEEEEEeCC----------CeEEEEeCCCCeeEEEeccc-CcCEEEEEEcCCCCEEEEEe
Q psy11350 315 VLHQEGHGKPVYCMSFQGDGSVVATGGLD----------AFGRVWDLRTGRCIMFLEGH-LKSVFSVDFSPDGYHLATGS 383 (471)
Q Consensus 315 ~~~~~~~~~~v~~~~~s~d~~~l~t~~~d----------g~i~iwd~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~s~s 383 (471)
+..+... .....++++|+|++++++..+ +.|.+||..+++....+... ...+..++|+|+++.|+++.
T Consensus 165 ~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 165 VDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp EEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred EEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 7777643 334688999999987777654 78999999999877666532 24689999999999988875
Q ss_pred CCCcEEEEECCCccch
Q psy11350 384 EDNAVKIWDLRKRRLL 399 (471)
Q Consensus 384 ~dg~i~iwd~~~~~~~ 399 (471)
. .|.+||..+++..
T Consensus 244 ~--~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 244 N--DIWRMPVEADRVP 257 (328)
T ss_dssp S--SEEEEETTCSSCC
T ss_pred c--EEEEEECCCCcee
Confidence 5 8999999988864
No 196
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.56 E-value=3.3e-11 Score=111.03 Aligned_cols=238 Identities=9% Similarity=-0.130 Sum_probs=167.0
Q ss_pred cCCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEE-eecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeC
Q psy11350 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL 228 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 228 (471)
.....+.++++.++|++.++...++.|.+||.. ++.... +..+...+.++++.+++. ++++...++.|..||.
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-----l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-----IWFTENGANKIGKLSK 90 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-----EEEEETTTTEEEEECT
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-----EEEEecCCCeEEEECC
Confidence 345688999999999988777778999999987 554432 223346788999998886 5666556788999998
Q ss_pred CCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccccc---cc-CCCCcceEEEEECCCCCEEEEEecCCeE
Q psy11350 229 DKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN---LE-GHEPFRVSRIKFHPSGRFLGTCCWDHSW 304 (471)
Q Consensus 229 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~---~~-~~~~~~v~~l~~~~~~~~l~~~~~dg~i 304 (471)
. ++............+..+++.++|..+++...++.+....+... +. ......+.++++.++++.+++...++.|
T Consensus 91 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 91 K-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred C-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 7 55432221112247899999999988777665555433221111 11 1123468899999999966666667899
Q ss_pred EEEECCCCcEEEE-eeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEE-ecccCcCEEEEEEcCCCCEEEEE
Q psy11350 305 RLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF-LEGHLKSVFSVDFSPDGYHLATG 382 (471)
Q Consensus 305 ~iwd~~~~~~~~~-~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~-~~~h~~~v~~~~~sp~~~~l~s~ 382 (471)
..||. +++.... ...+...+.+++++++|.++++....+.|.+||. +++.... +..+...+.+++++++|+++++.
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEec
Confidence 99998 5554432 2234567889999999988877777788999998 5544332 33455678999999999977777
Q ss_pred eCCCcEEEEECCCcc
Q psy11350 383 SEDNAVKIWDLRKRR 397 (471)
Q Consensus 383 s~dg~i~iwd~~~~~ 397 (471)
..++.|..||. +++
T Consensus 248 ~~~~~i~~~~~-~g~ 261 (300)
T 2qc5_A 248 WGANQIGRITN-DNT 261 (300)
T ss_dssp TTTTEEEEECT-TSC
T ss_pred cCCCeEEEECC-CCc
Confidence 67789999998 444
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.56 E-value=1.1e-11 Score=118.10 Aligned_cols=233 Identities=9% Similarity=-0.056 Sum_probs=156.0
Q ss_pred EEEEecCCCEEEEEe----------CCCcEEEEeCCCCceEEEeecC-------CCCEEEEEEeeCCCCCCccEEEEEeC
Q psy11350 157 YCSFSPDSQHVATAS----------WSGLCKLWTVPECELVQTFRGH-------DCNVGAIEFHPLPSEGAVCSLASCAQ 219 (471)
Q Consensus 157 ~~~~s~~~~~l~tg~----------~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~~~~~l~s~~~ 219 (471)
.++|||||++|+++. .++.|.+||+.+++.+..+... ......+.|+|++. +|+.+..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~-----~l~v~n~ 144 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNA-----DLLFFQF 144 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCC-----EEEEEec
Confidence 889999999999886 3678999999998888776532 12345899999998 5666653
Q ss_pred --CCcEEEEeCCCCcceee-ecCCCCcceEEEEECCCCC-EEEEEeCCCeEEeccccc----------cccCCCCcceEE
Q psy11350 220 --DGSVKLWSLDKDTPLAN-LEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLDTPLA----------NLEGHEPFRVSR 285 (471)
Q Consensus 220 --dg~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~s~~~~-~i~~~~~d~~~~~~~~~~----------~~~~~~~~~v~~ 285 (471)
++.|.++| .+++.+.. +.... ++.+.|++. .+++.+.|+.+....... .+....+ ....
T Consensus 145 ~~~~~v~viD-~t~~~~~~~i~~~~-----~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p-~~~~ 217 (373)
T 2mad_H 145 AAGPAVGLVV-QGGSSDDQLLSSPT-----CYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQN-LLTQ 217 (373)
T ss_pred CCCCeEEEEE-CCCCEEeEEcCCCc-----eEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcc-eeec
Confidence 57899999 99988777 55332 123333332 233333444322111100 0011101 1123
Q ss_pred EEECCCCCEEEEEecCCeEEEEECCCCc--EEEEeeC----------CCCCeEEEEEeCCCCEEEEEeC----------C
Q psy11350 286 IKFHPSGRFLGTCCWDHSWRLWDLNQGQ--EVLHQEG----------HGKPVYCMSFQGDGSVVATGGL----------D 343 (471)
Q Consensus 286 l~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~----------~~~~v~~~~~s~d~~~l~t~~~----------d 343 (471)
..+.+++..++..+..+.+.+.|+.... .+..+.- .......+.++|+++.++++.. .
T Consensus 218 ~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~ 297 (373)
T 2mad_H 218 PAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAA 297 (373)
T ss_pred ceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCC
Confidence 4566666665555678899999997653 2222211 1122445789999988777643 3
Q ss_pred CeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCC-EEEEEe-CCCcEEEEECCCccchhee
Q psy11350 344 AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY-HLATGS-EDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 344 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s-~dg~i~iwd~~~~~~~~~~ 402 (471)
+.|.++|+.+++.+.++.. .....+++|+|||+ .++++. .++.|.+||+.+++.+..+
T Consensus 298 ~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 5799999999999888863 34689999999999 777777 5899999999999998874
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.56 E-value=3.1e-13 Score=140.33 Aligned_cols=260 Identities=11% Similarity=-0.046 Sum_probs=150.3
Q ss_pred ecCCCEEEEEeCCC-----cEEEEeCCCCceEEEee------cCCCCEEEEEEeeCCCCCCccEEE-----EEeCCCcEE
Q psy11350 161 SPDSQHVATASWSG-----LCKLWTVPECELVQTFR------GHDCNVGAIEFHPLPSEGAVCSLA-----SCAQDGSVK 224 (471)
Q Consensus 161 s~~~~~l~tg~~dg-----~i~iwd~~~~~~~~~~~------~h~~~v~~l~~~~~~~~~~~~~l~-----s~~~dg~i~ 224 (471)
+|+|++++....++ .|++.+...++....+. +|...+..++|+|++. +|+ .|+.+..|+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~-----~la~~~~~~G~~~~~i~ 150 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGK-----KVAFAQKPNAADEAVLH 150 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSS-----EEEEEEEETTCSCCEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCC-----EEEEEECCCCCceEEEE
Confidence 48899888666443 34555554555433332 3555789999999998 455 233346899
Q ss_pred EEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecCCe-
Q psy11350 225 LWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 303 (471)
Q Consensus 225 iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~- 303 (471)
+||+.+++.+.. .+.. ......++|+|||+.|+.++.|..
T Consensus 151 v~dl~tg~~~~~--~~~~-------------------------------------~~~~~~~~wspDg~~l~~~~~d~~~ 191 (695)
T 2bkl_A 151 VIDVDSGEWSKV--DVIE-------------------------------------GGKYATPKWTPDSKGFYYEWLPTDP 191 (695)
T ss_dssp EEETTTCCBCSS--CCBS-------------------------------------CCTTCCCEECTTSSEEEEEECCCCT
T ss_pred EEECCCCCCcCC--cccC-------------------------------------cccccceEEecCCCEEEEEEecCCC
Confidence 999998875410 0000 001134666666666666666554
Q ss_pred ------------EEEEECCCCc----EEEEeeCCCCCeEEEEEeCCCCEEEEEeCCC----eEEEEeCCCCeeEEEeccc
Q psy11350 304 ------------WRLWDLNQGQ----EVLHQEGHGKPVYCMSFQGDGSVVATGGLDA----FGRVWDLRTGRCIMFLEGH 363 (471)
Q Consensus 304 ------------i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg----~i~iwd~~~~~~~~~~~~h 363 (471)
|++|++.+++ .+.....|...+.++.|+|||++|+.++.++ .|++|+..++.. ..+..+
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~ 270 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKG 270 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEEC
T ss_pred CCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecC
Confidence 9999999876 3333344566789999999999988877666 678887665543 344456
Q ss_pred CcCEEEEEEcCCCCEEEEEe---CCCcEEEEECCCccc--hheecccCCC-ccceeeccccceeeeecccCCCcccccch
Q psy11350 364 LKSVFSVDFSPDGYHLATGS---EDNAVKIWDLRKRRL--LKWCTQLLPN-SIGVTSLLTDLYIDVLESLNPGIGNIISS 437 (471)
Q Consensus 364 ~~~v~~~~~sp~~~~l~s~s---~dg~i~iwd~~~~~~--~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 437 (471)
...+....| ++|.+++++. .++.|.+||+.++.. ...+....+. .+.-+++. +..+.+... ..+...+...
T Consensus 271 ~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~-~dg~~~l~~~ 347 (695)
T 2bkl_A 271 VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL-KDATSEVRVA 347 (695)
T ss_dssp SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE-ETTEEEEEEE
T ss_pred CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE-ECCEEEEEEE
Confidence 566666667 5666444443 257899999988764 2233322211 12222222 333322222 2222222111
Q ss_pred h-hhccccccee--eecccceeeeecCCeEEEee
Q psy11350 438 A-LKEQVEPIPL--LLDIQKLTFKFDSDLHAMVL 468 (471)
Q Consensus 438 ~-~~~~~~~~~~--~~~~~~l~fs~dg~~lA~~~ 468 (471)
. .+.....+.. ...+..++++|||+.+++..
T Consensus 348 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ 381 (695)
T 2bkl_A 348 TLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVF 381 (695)
T ss_dssp ETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEE
T ss_pred eCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEE
Confidence 1 1112222322 22356778889998877654
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.55 E-value=1e-12 Score=123.96 Aligned_cols=240 Identities=15% Similarity=0.082 Sum_probs=160.9
Q ss_pred EEEEecCCCEEEEEe----------CCCcEEEEeCCCCceEEEeecCC-------CCEEEEEEeeCCCCCCccEEEEEeC
Q psy11350 157 YCSFSPDSQHVATAS----------WSGLCKLWTVPECELVQTFRGHD-------CNVGAIEFHPLPSEGAVCSLASCAQ 219 (471)
Q Consensus 157 ~~~~s~~~~~l~tg~----------~dg~i~iwd~~~~~~~~~~~~h~-------~~v~~l~~~~~~~~~~~~~l~s~~~ 219 (471)
.++++|||++|++++ .++.|.+||..+++.+..+.... .....+.|+|++. .++.+..
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk-----~lyVan~ 156 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK-----TLLFYQF 156 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS-----EEEEEEC
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC-----EEEEEEc
Confidence 399999999988775 36789999999999988875321 2345799999998 5666653
Q ss_pred --CCcEEEEeCCCCcceeeecCCCCcceE------EEEECCCCCEEEEEeCC-CeEEeccccccccCCCCcce-EEEEEC
Q psy11350 220 --DGSVKLWSLDKDTPLANLEGHEPFRVS------RIKFHPSGRFLGTCCWD-HSWRLDTPLANLEGHEPFRV-SRIKFH 289 (471)
Q Consensus 220 --dg~i~iwd~~~~~~~~~~~~~~~~~v~------~~~~s~~~~~i~~~~~d-~~~~~~~~~~~~~~~~~~~v-~~l~~~ 289 (471)
++.|.++|+.+++.+..+.......+. -++.++||+++++.... +.+.. .....+. ....++ ....|.
T Consensus 157 ~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~-~~~~~~~-~~~~~~~~~~~~~ 234 (386)
T 3sjl_D 157 SPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI-THTEVFH-PEDEFLINHPAYS 234 (386)
T ss_dssp SSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEE-EECCCCS-CTTSCBCSCCEEE
T ss_pred CCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEE-eecceec-cccccccccceeE
Confidence 689999999999988887543211111 12556666666555543 33211 0001111 101112 123554
Q ss_pred -CCCCEEEEEecCCeEEEEECCCCcE--EEEee---------C-CCCCeEEEEEeCCCCEEEEEeC----------CCeE
Q psy11350 290 -PSGRFLGTCCWDHSWRLWDLNQGQE--VLHQE---------G-HGKPVYCMSFQGDGSVVATGGL----------DAFG 346 (471)
Q Consensus 290 -~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~---------~-~~~~v~~~~~s~d~~~l~t~~~----------dg~i 346 (471)
++|++++ .+.+|+|++.|+.+... +..+. + .......++++++++.++.... .+.|
T Consensus 235 ~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V 313 (386)
T 3sjl_D 235 QKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFV 313 (386)
T ss_dssp TTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEE
T ss_pred cCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEE
Confidence 5775544 56689999999976542 22221 0 1122335777999988887643 2579
Q ss_pred EEEeCCCCeeEEEecccCcCEEEEEEcCCCC-EEEEE-eCCCcEEEEECCCccchheeccc
Q psy11350 347 RVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY-HLATG-SEDNAVKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 347 ~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~-s~dg~i~iwd~~~~~~~~~~~~~ 405 (471)
.++|+.+++.+..+..- ..+.+|+++||++ +|+++ ..++.|.++|..+++.+.++...
T Consensus 314 ~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 314 VVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp EEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred EEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 99999999999887632 4788999999986 66665 45899999999999999988754
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.55 E-value=1.1e-11 Score=114.59 Aligned_cols=224 Identities=11% Similarity=0.036 Sum_probs=155.5
Q ss_pred CCcCeEEEEEecCCC-EEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCC
Q psy11350 151 DTRPISYCSFSPDSQ-HVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD 229 (471)
Q Consensus 151 h~~~V~~~~~s~~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 229 (471)
+..-..+..|+|++. ++++...++.|..||..+++.. .+. ....+.++++++++. ++ .+. ++.|.+||..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~-----l~-v~~-~~~l~~~d~~ 81 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGG-----YV-ATI-GTKFCALNWK 81 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSS-----EE-EEE-TTEEEEEETT
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCC-----EE-EEE-CCeEEEEECC
Confidence 444566889999655 5556667899999999877653 332 357899999999987 34 444 5689999998
Q ss_pred CCcceeeecC---CCCcceEEEEECCCCCEEEEEeCC-----------C-eEEeccc--cccccCCCCcceEEEEECCCC
Q psy11350 230 KDTPLANLEG---HEPFRVSRIKFHPSGRFLGTCCWD-----------H-SWRLDTP--LANLEGHEPFRVSRIKFHPSG 292 (471)
Q Consensus 230 ~~~~~~~~~~---~~~~~v~~~~~s~~~~~i~~~~~d-----------~-~~~~~~~--~~~~~~~~~~~v~~l~~~~~~ 292 (471)
+++....... .....+..++++|+|+++++.... + .+++... ...+... ......++|+|++
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~-~~~pngi~~spdg 160 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ-VDISNGLDWSLDH 160 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE-ESBEEEEEECTTS
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec-cccccceEEcCCC
Confidence 7764333222 122358899999999976654322 1 2333211 1111111 2246789999999
Q ss_pred CEEEEE-ecCCeEEEEEC--CCCcE-----EEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccC
Q psy11350 293 RFLGTC-CWDHSWRLWDL--NQGQE-----VLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364 (471)
Q Consensus 293 ~~l~~~-~~dg~i~iwd~--~~~~~-----~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~ 364 (471)
+.|+.+ +.++.|.+||+ .++.. +..+..+......++++++|++.++....+.|.+||..+++.+..+..+.
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV 240 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC
Confidence 977554 55789999997 45543 12223334567899999999988888888899999999999998888777
Q ss_pred cCEEEEEEc-CCCCEEEEEeC
Q psy11350 365 KSVFSVDFS-PDGYHLATGSE 384 (471)
Q Consensus 365 ~~v~~~~~s-p~~~~l~s~s~ 384 (471)
..+++++|. |+++.|+.++.
T Consensus 241 ~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 241 DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp SBEEEEEEESGGGCEEEEEEB
T ss_pred CCceEEEEeCCCCCEEEEEcC
Confidence 789999998 88877765553
No 201
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.54 E-value=1.5e-12 Score=118.79 Aligned_cols=187 Identities=12% Similarity=0.128 Sum_probs=145.8
Q ss_pred EEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc----cccccCCCCcceEEEEE
Q psy11350 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP----LANLEGHEPFRVSRIKF 288 (471)
Q Consensus 213 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~----~~~~~~~~~~~v~~l~~ 288 (471)
+|++++.++.|.+||..+++.+..+..+....+.++.++|+|+++++ .++.+....+ +..+..+....+.++.+
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~ 84 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITRDGRELWNIAAPAGCEMQTARI 84 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECTTSCEEEEEECCTTCEEEEEEE
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECCCCCEEEEEcCCCCccccccEE
Confidence 78999999999999999999999988765346889999999998883 3333322211 11222222346888999
Q ss_pred CCCCCEEEEEec-CCeEEEEECCCCcEEEEee------CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec
Q psy11350 289 HPSGRFLGTCCW-DHSWRLWDLNQGQEVLHQE------GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361 (471)
Q Consensus 289 ~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~------~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~ 361 (471)
.|+|+++++.+. ++.|..+|. +++.+..+. .+......+++.++|+++++...++.|.+||.. |+.+.++.
T Consensus 85 ~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~ 162 (276)
T 3no2_A 85 LPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVK 162 (276)
T ss_dssp CTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEE
T ss_pred CCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEE
Confidence 999999999887 788888886 677766653 122234566789999999999999999999987 99988887
Q ss_pred ccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecc
Q psy11350 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQ 404 (471)
Q Consensus 362 ~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 404 (471)
.+ ..+.++...++|+++++++.++.|..+|..+++.+..+..
T Consensus 163 ~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~ 204 (276)
T 3no2_A 163 LS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNA 204 (276)
T ss_dssp CS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEG
T ss_pred CC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecC
Confidence 54 4566788899999999999888999999999999887764
No 202
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.54 E-value=2.1e-13 Score=129.18 Aligned_cols=172 Identities=14% Similarity=-0.013 Sum_probs=129.9
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc-----------eEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCc
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECE-----------LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGS 222 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~-----------~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 222 (471)
+++.+++++...+|++|+.+ .+++|++.+.. ..... .+.. |++++| ++. +|+++ .++.
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~-----~L~v~-~~~~ 107 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGD-----QVLVS-TRNA 107 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETT-----EEEEE-ESSE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCC-----EEEEE-cCCc
Confidence 68999999999999999976 55669875433 11222 3556 999999 665 67777 8899
Q ss_pred EEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecCC
Q psy11350 223 VKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 302 (471)
Q Consensus 223 i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg 302 (471)
|++||+.+.........+. ..+.++.+.+. .+++++.||
T Consensus 108 l~v~dv~sl~~~~~~~~~~---------------------------------------~~v~~i~~~~p--~~av~~~dG 146 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFE---------------------------------------KPVFQLKNVNN--TLVILNSVN 146 (388)
T ss_dssp EEEEESSSTTCEEEEEECS---------------------------------------SCEEEEEECSS--EEEEEETTS
T ss_pred EEEEEchhhhccCccceee---------------------------------------cceeeEEecCC--CEEEEECCC
Confidence 9999997765433332221 13556666544 388899999
Q ss_pred eEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCee--EEEe------c---ccCcCEEEEE
Q psy11350 303 SWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC--IMFL------E---GHLKSVFSVD 371 (471)
Q Consensus 303 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~--~~~~------~---~h~~~v~~~~ 371 (471)
.|.+||+.++.... +...|+|++|||+| ++.|..||.+++|+...+.. ..++ . +|...|.+|.
T Consensus 147 ~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~ 220 (388)
T 1xip_A 147 DLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVT 220 (388)
T ss_dssp EEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEE
T ss_pred CEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEE
Confidence 99999999887643 44589999999999 67889999999999887775 5555 2 4778899999
Q ss_pred EcCCCCEEEEEe
Q psy11350 372 FSPDGYHLATGS 383 (471)
Q Consensus 372 ~sp~~~~l~s~s 383 (471)
|.+++.++++-+
T Consensus 221 wl~~~~flv~y~ 232 (388)
T 1xip_A 221 ILSPQDFLAVFG 232 (388)
T ss_dssp ESSSSEEEEEEE
T ss_pred EecCCeEEEEEc
Confidence 999999888743
No 203
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.52 E-value=1.7e-11 Score=114.95 Aligned_cols=221 Identities=14% Similarity=0.019 Sum_probs=150.3
Q ss_pred CeEEEEEecCCC-EEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc
Q psy11350 154 PISYCSFSPDSQ-HVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT 232 (471)
Q Consensus 154 ~V~~~~~s~~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 232 (471)
-..+..|+|++. ++++...++.|.+||..+++.. .+. ....+.+++|.|++. +++ ++.+ .|.+||..+++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~-----l~v-~~~~-gl~~~d~~~g~ 120 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSK-----QLI-ASDD-GLFLRDTATGV 120 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTE-----EEE-EETT-EEEEEETTTCC
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCe-----EEE-EECC-CEEEEECCCCc
Confidence 456789999855 4556667889999999877543 333 346799999999986 444 4444 49999998776
Q ss_pred ceeeecC---CCCcceEEEEECCCCCEEEEEeCC-------CeEEeccc-cccccCCCCcceEEEEECCCCCEEEEE-ec
Q psy11350 233 PLANLEG---HEPFRVSRIKFHPSGRFLGTCCWD-------HSWRLDTP-LANLEGHEPFRVSRIKFHPSGRFLGTC-CW 300 (471)
Q Consensus 233 ~~~~~~~---~~~~~v~~~~~s~~~~~i~~~~~d-------~~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~ 300 (471)
....... .....+.++.++|+|+++++...+ +.+.+... ...+... ......++|+|+++.++.+ +.
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~~-~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD-ISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEE-ESSEEEEEECTTSCEEEEEETT
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEEeeCC-CcccCCeEEcCCCCEEEEEECC
Confidence 5433221 112368899999999977655421 22443311 1111111 1246789999999877655 45
Q ss_pred CCeEEEEECC--CC-c-----EEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEE
Q psy11350 301 DHSWRLWDLN--QG-Q-----EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372 (471)
Q Consensus 301 dg~i~iwd~~--~~-~-----~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 372 (471)
++.|.+||+. ++ . .+..+.........++++++|.++++...++.|.+||. +++.+..+..+...+++++|
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af 278 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAF 278 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEE
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEE
Confidence 6899999986 55 3 12223333456788999999998887777789999998 67777777767678999999
Q ss_pred c-CCCCEEEEEeCC
Q psy11350 373 S-PDGYHLATGSED 385 (471)
Q Consensus 373 s-p~~~~l~s~s~d 385 (471)
+ |++..|+.++..
T Consensus 279 ~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 279 IGPDASRLLVTSAR 292 (326)
T ss_dssp ESTTSCEEEEEEBC
T ss_pred ecCCCCEEEEEecC
Confidence 8 888777555433
No 204
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.51 E-value=2e-12 Score=124.12 Aligned_cols=239 Identities=13% Similarity=0.016 Sum_probs=165.3
Q ss_pred EEEEecCCCEEEEEe----------CCCcEEEEeCCCCceEEEeecC-------CCCEEEEEEeeCCCCCCccEEEEEeC
Q psy11350 157 YCSFSPDSQHVATAS----------WSGLCKLWTVPECELVQTFRGH-------DCNVGAIEFHPLPSEGAVCSLASCAQ 219 (471)
Q Consensus 157 ~~~~s~~~~~l~tg~----------~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~~~~~l~s~~~ 219 (471)
.++++|||++|+++. .++.|.++|..+++.+..+... ......+.|+|++. +++.+..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk-----~lyV~n~ 196 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNK-----NLLFYQF 196 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSS-----EEEEEEC
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCC-----EEEEEec
Confidence 799999999988876 3678999999999998887532 12345789999998 5666653
Q ss_pred --CCcEEEEeCCCCcceeeecCCCCcc------eEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCC
Q psy11350 220 --DGSVKLWSLDKDTPLANLEGHEPFR------VSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPS 291 (471)
Q Consensus 220 --dg~i~iwd~~~~~~~~~~~~~~~~~------v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 291 (471)
++.|.+.|+.+++.+..+....... -..+.++++|+.+++...++.+..... ..+..........+.|.++
T Consensus 197 ~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~-~~~~v~~~p~~~~~~~~~d 275 (426)
T 3c75_H 197 SPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT-EVFHTEDELLINHPAFSLR 275 (426)
T ss_dssp SSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC-CCCSCTTSCBCSCCEECTT
T ss_pred CCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee-eeeccCCCceeeEeeecCC
Confidence 6889999999999888776532100 112456666666655554443221000 1111110101123577999
Q ss_pred CCEEEEEecCCeEEEEECCCCcEEE--EeeC----------CCCCeEEEEEeCCCCEEEEEeC----------CCeEEEE
Q psy11350 292 GRFLGTCCWDHSWRLWDLNQGQEVL--HQEG----------HGKPVYCMSFQGDGSVVATGGL----------DAFGRVW 349 (471)
Q Consensus 292 ~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~----------~~~~v~~~~~s~d~~~l~t~~~----------dg~i~iw 349 (471)
+..++..+..+.|.+.|+....... .+.- .......++++|+++.+++... ++.|.++
T Consensus 276 g~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVI 355 (426)
T 3c75_H 276 SGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVL 355 (426)
T ss_dssp TCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEE
Confidence 9888888889999999987654221 1110 0011223689999887777642 3579999
Q ss_pred eCCCCeeEEEecccCcCEEEEEEcCCCC-EEEEEe-CCCcEEEEECCCccchhee
Q psy11350 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGY-HLATGS-EDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 350 d~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s-~dg~i~iwd~~~~~~~~~~ 402 (471)
|+.+.+.+.++... ....+++|+|||+ +++++. .++.|.++|+.+++.++++
T Consensus 356 D~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 356 NAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp ETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred ECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 99999999888643 3589999999999 888887 5899999999999999887
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.51 E-value=9.4e-12 Score=120.33 Aligned_cols=231 Identities=10% Similarity=0.029 Sum_probs=159.5
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCC--cEEEEeCCC
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG--SVKLWSLDK 230 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~ 230 (471)
.....++|+++++++++...++.|++||..++...........+ . ++|+|++. .|+++..++ .|.+|+...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~-----~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQ-----RVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSS-----EEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCC-----cEEEEecCCCceEEEEEcCC
Confidence 46789999999997777777899999999887776655543333 3 99999987 677777766 788888766
Q ss_pred Ccceeee---cCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc---cc-cc-----cCCCCcc-eEEEEECCC-CCEEE
Q psy11350 231 DTPLANL---EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP---LA-NL-----EGHEPFR-VSRIKFHPS-GRFLG 296 (471)
Q Consensus 231 ~~~~~~~---~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~---~~-~~-----~~~~~~~-v~~l~~~~~-~~~l~ 296 (471)
+.....+ .......+.+++++|++..|+++..++.+..... .. .+ .+..... ...++|+|+ +.+++
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 5543333 1212336788999996666666666665433211 11 11 1111111 129999995 55555
Q ss_pred EEecCCeEEEEECCCCcEEEEeeCCC---------------CCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCCCeeEEEe
Q psy11350 297 TCCWDHSWRLWDLNQGQEVLHQEGHG---------------KPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTGRCIMFL 360 (471)
Q Consensus 297 ~~~~dg~i~iwd~~~~~~~~~~~~~~---------------~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~~~~~~~~ 360 (471)
+-..++.|+.|+.... +..+.++. .....++++|+|.++++-. .++.|+.|++.++.. .++
T Consensus 284 ~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~ 360 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STV 360 (409)
T ss_dssp EETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEE
T ss_pred EeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEE
Confidence 5566789999997643 33333322 3478999999999888877 889999999878764 344
Q ss_pred ccc---------------CcCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy11350 361 EGH---------------LKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393 (471)
Q Consensus 361 ~~h---------------~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~ 393 (471)
.++ -.....++++|+|.++++-..++.|+.+++
T Consensus 361 ~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 361 AGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred eCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 443 246899999999888888888888988775
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.46 E-value=5e-12 Score=131.10 Aligned_cols=236 Identities=14% Similarity=0.077 Sum_probs=155.1
Q ss_pred cCCcCeEEEEEecCCCEEEEEe-----CCCcEEEEeCCCCceEEE-eecCCCCEEEEEEeeCCCCCCccEEEEEeCCC--
Q psy11350 150 GDTRPISYCSFSPDSQHVATAS-----WSGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG-- 221 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~-----~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg-- 221 (471)
+|...+..++|||||++||.+. ....|++||+.+++.+.. +.. .....++|+ ++. .|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~-----~l~y~~~~~~~ 197 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNE-----GFFYSSYDKPD 197 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTT-----EEEEEESSCCC
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCC-----EEEEEEecCcc
Confidence 5677899999999999988543 235799999999986543 221 112477899 887 577777664
Q ss_pred -----------cEEEEeCCCCcc--eeeecCCC--CcceEEEEECCCCCEEEEEeCCC----eEEec---c---cccccc
Q psy11350 222 -----------SVKLWSLDKDTP--LANLEGHE--PFRVSRIKFHPSGRFLGTCCWDH----SWRLD---T---PLANLE 276 (471)
Q Consensus 222 -----------~i~iwd~~~~~~--~~~~~~~~--~~~v~~~~~s~~~~~i~~~~~d~----~~~~~---~---~~~~~~ 276 (471)
.|.+|++.++.. ...+.... ...+..+.|+|||++++.....+ .+.+. . ....+.
T Consensus 198 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~ 277 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ 277 (693)
T ss_dssp -------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE
T ss_pred cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe
Confidence 399999987653 22333322 22477899999999887665432 23221 1 123333
Q ss_pred CCCCcceEEEEECCCCCEEEEEec-C---CeEEEEECCCCcE--EEEeeCCCCCeEEEEEeCCCCEEEEEeCCC---eEE
Q psy11350 277 GHEPFRVSRIKFHPSGRFLGTCCW-D---HSWRLWDLNQGQE--VLHQEGHGKPVYCMSFQGDGSVVATGGLDA---FGR 347 (471)
Q Consensus 277 ~~~~~~v~~l~~~~~~~~l~~~~~-d---g~i~iwd~~~~~~--~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg---~i~ 347 (471)
.+.. ..... |+++|..|+..+. + +.|..+|+.++.. ...+..|...+. .|+++++.|+....++ .|+
T Consensus 278 ~~~~-~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~ 353 (693)
T 3iuj_A 278 GDLD-ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVE 353 (693)
T ss_dssp CSSS-SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEE
T ss_pred CCCC-ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEE
Confidence 3322 23333 6666776665543 2 6799999988654 345566666665 8899888877766544 689
Q ss_pred EEeCCCCeeEEEec-ccCcCEEEEEEcCCCCEEEEEeCC----CcEEEEECCCccc
Q psy11350 348 VWDLRTGRCIMFLE-GHLKSVFSVDFSPDGYHLATGSED----NAVKIWDLRKRRL 398 (471)
Q Consensus 348 iwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~d----g~i~iwd~~~~~~ 398 (471)
+||+..+. ...+. .+.+.+..+.++|++..|+....+ ++|..||+.+++.
T Consensus 354 ~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 354 QFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 99987554 34443 344567888888887766554444 7899999987753
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.45 E-value=2.3e-10 Score=105.34 Aligned_cols=233 Identities=8% Similarity=-0.135 Sum_probs=158.5
Q ss_pred CCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEE-EeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCC
Q psy11350 151 DTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ-TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD 229 (471)
Q Consensus 151 h~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 229 (471)
+...+.+++++++|.++++...++.|..||.. ++... .+......+.++++.+++. ++++...++.|..||..
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~-----l~v~~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGD-----IWFTQLNGDRIGKLTAD 133 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTC-----EEEEETTTTEEEEECTT
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCC-----EEEEccCCCeEEEECCC
Confidence 34678899999999877777667899999987 55432 2222346789999998876 56666667899999986
Q ss_pred CCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccc---cccC-CCCcceEEEEECCCCCEEEEEecCCeEE
Q psy11350 230 KDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA---NLEG-HEPFRVSRIKFHPSGRFLGTCCWDHSWR 305 (471)
Q Consensus 230 ~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~---~~~~-~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 305 (471)
++............+..+++.++|+.+++...++.+....... .+.. .....+.++++.++++.+++....+.|.
T Consensus 134 -g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 134 -GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIG 212 (300)
T ss_dssp -SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred -CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEE
Confidence 5544222222233789999999999666655455433322111 1111 1123588999999998776666677899
Q ss_pred EEECCCCcEEEE-eeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEE-EecccCcCEEEEEEcCCCCEEEEEe
Q psy11350 306 LWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM-FLEGHLKSVFSVDFSPDGYHLATGS 383 (471)
Q Consensus 306 iwd~~~~~~~~~-~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~~~~sp~~~~l~s~s 383 (471)
+||. +++.... ...+...+.+++++++|+++++...++.|..||. +++... .+......+.++++.++|.++++..
T Consensus 213 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 213 RITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS
T ss_pred EEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc
Confidence 9998 5544332 3334567889999999997777767789999998 454332 2333456788999999998666654
Q ss_pred CCCcEEEEECC
Q psy11350 384 EDNAVKIWDLR 394 (471)
Q Consensus 384 ~dg~i~iwd~~ 394 (471)
. .|..+|.+
T Consensus 291 -~-~i~~~~p~ 299 (300)
T 2qc5_A 291 -C-KIGKLNLN 299 (300)
T ss_dssp -S-EEEEEEEC
T ss_pred -C-ceEEeCCC
Confidence 4 67666653
No 208
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.44 E-value=1.6e-11 Score=115.85 Aligned_cols=287 Identities=13% Similarity=0.015 Sum_probs=190.7
Q ss_pred EecCCCEEEEEeC-----CCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEe----------CCCcEE
Q psy11350 160 FSPDSQHVATASW-----SGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA----------QDGSVK 224 (471)
Q Consensus 160 ~s~~~~~l~tg~~-----dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~----------~dg~i~ 224 (471)
..|+++.+++... ++.|.+.|..+++.+..+.....+ . +.++|++.. ++.++ .++.|.
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~-----lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSF-----IAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSC-----EEEEEEEEEETTEEEEEEEEE
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCE-----EEEEcccccccccCCCCCEEE
Confidence 4789999988876 679999999999999998865566 4 999999984 54443 467899
Q ss_pred EEeCCCCcceeeecCCC------CcceEEEEECCCCCEEEEEeC--CCeEEe---cc--ccccccCCCCcceEEEEECCC
Q psy11350 225 LWSLDKDTPLANLEGHE------PFRVSRIKFHPSGRFLGTCCW--DHSWRL---DT--PLANLEGHEPFRVSRIKFHPS 291 (471)
Q Consensus 225 iwd~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~i~~~~~--d~~~~~---~~--~~~~~~~~~~~~v~~l~~~~~ 291 (471)
+||..+++.+..+.... ......+.|+|||++++++.. ++.+.+ .+ ....+... + . ...+...
T Consensus 113 viD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~--g-~-~~~~P~g 188 (386)
T 3sjl_D 113 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP--D-C-YHIFPTA 188 (386)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--S-E-EEEEEEE
T ss_pred EEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC--C-c-ceeecCC
Confidence 99999999888775322 124667999999999988864 455433 11 12222211 1 1 2223334
Q ss_pred CCEEEEEecCCeEEEEECCC-CcEEEEeeCC----CCCeE-EEEEe-CCCCEEEEEeCCCeEEEEeCCCCe--eEEEec-
Q psy11350 292 GRFLGTCCWDHSWRLWDLNQ-GQEVLHQEGH----GKPVY-CMSFQ-GDGSVVATGGLDAFGRVWDLRTGR--CIMFLE- 361 (471)
Q Consensus 292 ~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~----~~~v~-~~~~s-~d~~~l~t~~~dg~i~iwd~~~~~--~~~~~~- 361 (471)
.+.+++.+.||.+.+.++.+ ++.......+ ..++. ...|. ++|++++ .+.+|.|++.|+.++. .+..+.
T Consensus 189 ~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~ 267 (386)
T 3sjl_D 189 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEA 267 (386)
T ss_dssp TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEES
T ss_pred CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceec
Confidence 56777888899999999876 5543222111 12222 24665 5776655 4558999999997654 222221
Q ss_pred --------c-cCcCEEEEEEcCCCCEEEEEeC----------CCcEEEEECCCccchheecccCCCccceeeccccceee
Q psy11350 362 --------G-HLKSVFSVDFSPDGYHLATGSE----------DNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYID 422 (471)
Q Consensus 362 --------~-h~~~v~~~~~sp~~~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 422 (471)
+ ..+....++++|+++.++.... .+.|.+.|+.+++.+..+.... ...-+.++.|....
T Consensus 268 ~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~--~~~~lavs~D~~~~ 345 (386)
T 3sjl_D 268 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--EIDSINVSQDEKPL 345 (386)
T ss_dssp SCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EECEEEECSSSSCE
T ss_pred cccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC--CcceEEECCCCCeE
Confidence 0 1123345778999888877643 2579999999999999887543 34456667776533
Q ss_pred eec-ccCCCcccccchhhhcccccceeeecccceeeeec
Q psy11350 423 VLE-SLNPGIGNIISSALKEQVEPIPLLLDIQKLTFKFD 460 (471)
Q Consensus 423 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fs~d 460 (471)
++. ....+...++.......+..++.......|.+++|
T Consensus 346 ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 346 LYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 333 33345555677777777788888878888999987
No 209
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.43 E-value=6.3e-11 Score=107.55 Aligned_cols=196 Identities=8% Similarity=-0.051 Sum_probs=135.7
Q ss_pred CEEEEEEeeCCCCCCccEEE-EEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc--
Q psy11350 196 NVGAIEFHPLPSEGAVCSLA-SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL-- 272 (471)
Q Consensus 196 ~v~~l~~~~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~-- 272 (471)
...++++.+++. +++ +.+.++.|.+|+..+..... +.......+.+++++++|+.+++.. ++.+......
T Consensus 25 ~p~~i~~~~~g~-----l~v~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~ 97 (270)
T 1rwi_B 25 SPSGVAVDSAGN-----VYVTSEGMYGRVVKLATGSTGTTV-LPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN 97 (270)
T ss_dssp CEEEEEECTTCC-----EEEEECSSSCEEEEECC-----EE-CCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS
T ss_pred CccceEECCCCC-----EEEEccCCCCcEEEecCCCcccce-EeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc
Confidence 677999999886 565 44678999999976554322 2222223678899999999666655 6554442221
Q ss_pred --ccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEe
Q psy11350 273 --ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350 (471)
Q Consensus 273 --~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd 350 (471)
..+.......+.+++++++|+.+++...++.|.+|+..+.............+.+++++++|+++++...++.|.+||
T Consensus 98 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 98 NQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp CCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred eEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 112112124688999999999777777788999998766544433333334678899999999888777788999999
Q ss_pred CCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccc
Q psy11350 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398 (471)
Q Consensus 351 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 398 (471)
............+...+.+++++++|.++++...++.|.+||......
T Consensus 178 ~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 178 AESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp TTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred cCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 887765544334446789999999998888877889999999876543
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.43 E-value=3.8e-11 Score=111.41 Aligned_cols=227 Identities=10% Similarity=-0.012 Sum_probs=151.7
Q ss_pred ecCCcCeEEEEEecCCC-EEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe
Q psy11350 149 VGDTRPISYCSFSPDSQ-HVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227 (471)
Q Consensus 149 ~gh~~~V~~~~~s~~~~-~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 227 (471)
..+........|+|+|+ +++++..++.|..|+. +++ ...+..+...+..+++.+++. ++++...++.|.+|+
T Consensus 41 ~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~-----l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 41 YDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQR-----LVHCEHGRRAITRSD 113 (305)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSC-----EEEEETTTTEEEEEC
T ss_pred ecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCC-----EEEEECCCCEEEEEC
Confidence 34556678899999998 5667777899999997 555 445555677899999999987 454444557899999
Q ss_pred CCCCcceeee---cCCCCcceEEEEECCCCCEEEE----EeC--------------CCeEEecc---ccccccCCCCcce
Q psy11350 228 LDKDTPLANL---EGHEPFRVSRIKFHPSGRFLGT----CCW--------------DHSWRLDT---PLANLEGHEPFRV 283 (471)
Q Consensus 228 ~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~i~~----~~~--------------d~~~~~~~---~~~~~~~~~~~~v 283 (471)
.. ++..... .......+..+++.|+|+++++ +.. .+.+.+.. ....+. . ....
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~-~~~p 190 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D-LDHP 190 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E-ESSE
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c-CCCC
Confidence 85 5432221 1111224678999999998886 332 11233321 111121 1 2346
Q ss_pred EEEEECCCCCEEEEEecC------CeEEEEECCCCcEE--EEe-eCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCC
Q psy11350 284 SRIKFHPSGRFLGTCCWD------HSWRLWDLNQGQEV--LHQ-EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354 (471)
Q Consensus 284 ~~l~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~--~~~-~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~ 354 (471)
..++|+|+++.|+++... +.|.+|++..+... ..+ .........++++++|++.++. .+ .|.+|+. .+
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~-~g 267 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS-DG 267 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECT-TS
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECC-CC
Confidence 789999999988887765 78999998765411 111 1123345578999999955444 44 4999997 57
Q ss_pred eeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEE
Q psy11350 355 RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389 (471)
Q Consensus 355 ~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~ 389 (471)
+.+..+..+. .+.+++|+|+++.|+.++.++..+
T Consensus 268 ~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 268 QLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp CEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred CEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 7777776554 588999999998888887765433
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.42 E-value=1.7e-11 Score=128.24 Aligned_cols=233 Identities=16% Similarity=0.066 Sum_probs=147.7
Q ss_pred ecCCCEEEEEeCCCc---EEEE--eCC---CCceEEEe------ecCCCCEEEEEEeeCCCCCCccEEEEEeCC-C----
Q psy11350 161 SPDSQHVATASWSGL---CKLW--TVP---ECELVQTF------RGHDCNVGAIEFHPLPSEGAVCSLASCAQD-G---- 221 (471)
Q Consensus 161 s~~~~~l~tg~~dg~---i~iw--d~~---~~~~~~~~------~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d-g---- 221 (471)
+|+|++++....++. -.+| +.. .++....+ .+|...+..++|+|++. .|+.++.+ |
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~-----~la~~~~~~G~e~~ 189 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGR-----LLAYSVQDGGSDWR 189 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSS-----EEEEEEEETTCSEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCC-----EEEEEEcCCCCceE
Confidence 489998886654432 4445 443 34333322 12334688999999998 56655433 3
Q ss_pred cEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCe--------------EEe---cccc----ccccCC-C
Q psy11350 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--------------WRL---DTPL----ANLEGH-E 279 (471)
Q Consensus 222 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~--------------~~~---~~~~----~~~~~~-~ 279 (471)
.|++||+.+++.+..... ...+..++|+|| +.|+.++.+.. +.+ .+.. ..+... .
T Consensus 190 ~i~v~dl~tg~~~~~~~~--~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~ 266 (741)
T 1yr2_A 190 TVKFVGVADGKPLADELK--WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL 266 (741)
T ss_dssp EEEEEETTTCCEEEEEEE--EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred EEEEEECCCCCCCCccCC--CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC
Confidence 599999999887543111 112357899999 99988876643 222 1111 111221 1
Q ss_pred CcceEEEEECCCCCEEEEEecCC-----eEEEEECCCC--cEEEEeeCCCCCeEEEEEeCCCCEEEEEeC----CCeEEE
Q psy11350 280 PFRVSRIKFHPSGRFLGTCCWDH-----SWRLWDLNQG--QEVLHQEGHGKPVYCMSFQGDGSVVATGGL----DAFGRV 348 (471)
Q Consensus 280 ~~~v~~l~~~~~~~~l~~~~~dg-----~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~----dg~i~i 348 (471)
...+..+.|+|||++|+..+.++ .|++||+.++ +....+..+...+.... +|+|..|+..+. ++.|.+
T Consensus 267 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~ 345 (741)
T 1yr2_A 267 PKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVR 345 (741)
T ss_dssp TTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEE
T ss_pred CeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEE
Confidence 22478999999999998877554 8999999876 31445555555555553 488888887765 345999
Q ss_pred EeCCCC--eeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC-Cccchheec
Q psy11350 349 WDLRTG--RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR-KRRLLKWCT 403 (471)
Q Consensus 349 wd~~~~--~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~ 403 (471)
||+.++ .....+..+...+..+.|+ ++.++++...|+..+||.+. +++.+..+.
T Consensus 346 ~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~ 402 (741)
T 1yr2_A 346 VDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVS 402 (741)
T ss_dssp EECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECB
T ss_pred EeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeecc
Confidence 999874 3344444555567788887 66788888899987777554 355444443
No 212
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.41 E-value=1.1e-09 Score=104.44 Aligned_cols=271 Identities=8% Similarity=-0.081 Sum_probs=169.2
Q ss_pred EecCCCEEEEEeC--CC---cEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEe----------CCCcEE
Q psy11350 160 FSPDSQHVATASW--SG---LCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA----------QDGSVK 224 (471)
Q Consensus 160 ~s~~~~~l~tg~~--dg---~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~----------~dg~i~ 224 (471)
..|+++++++... .+ .|.+||..+++.+..+.....+ .++++|++. .++.+. .++.|.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~-----~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGS-----EFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCC-----EEEEEeccccccccCCCCCeEE
Confidence 3477877776653 22 8899999999998888754444 999999998 466554 367899
Q ss_pred EEeCCCCcceeeecCC-C-----CcceEEEEECCCCCEEEEEeCC--CeEEeccccccccCC-CCcceEEEEECCCC-CE
Q psy11350 225 LWSLDKDTPLANLEGH-E-----PFRVSRIKFHPSGRFLGTCCWD--HSWRLDTPLANLEGH-EPFRVSRIKFHPSG-RF 294 (471)
Q Consensus 225 iwd~~~~~~~~~~~~~-~-----~~~v~~~~~s~~~~~i~~~~~d--~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~-~~ 294 (471)
+||..+.+.+..+... . ......+.|+|||++++++... +.+.+......+... .+.+ .++.+.|++ +.
T Consensus 101 viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD~t~~~~~~~i~~~-~~~~~~~~~~~~ 179 (373)
T 2mad_H 101 VFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSSP-TCYHIHPGAPST 179 (373)
T ss_pred EEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEECCCCEEeEEcCCC-ceEEEEeCCCce
Confidence 9999988877766543 1 1134589999999999988743 443332222221111 1111 234455655 45
Q ss_pred EEEEecCCeEEEEECCCCcEEEEee-----CCCCCe-EEEEEeCCCCEEEEEeCCCeEEEEeCCCCe--eEEEecc----
Q psy11350 295 LGTCCWDHSWRLWDLNQGQEVLHQE-----GHGKPV-YCMSFQGDGSVVATGGLDAFGRVWDLRTGR--CIMFLEG---- 362 (471)
Q Consensus 295 l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~v-~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~--~~~~~~~---- 362 (471)
+++.+.||.+.++|. +++.+.... ....++ ....+.+++..++..+..+.+.+.|+.++. .+..+..
T Consensus 180 ~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~ 258 (373)
T 2mad_H 180 FYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGG 258 (373)
T ss_pred EEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCc
Confidence 667778999999999 877663321 112222 235667766554444578899999987652 2222211
Q ss_pred ------cCcCEEEEEEcCCCCEEEEEeC----------CCcEEEEECCCccchheecccCCCccceeeccccceeeeecc
Q psy11350 363 ------HLKSVFSVDFSPDGYHLATGSE----------DNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLES 426 (471)
Q Consensus 363 ------h~~~v~~~~~sp~~~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 426 (471)
.......++++|+++.++.+.. .+.|.++|+.+++.+.++... .....+.++.|....++..
T Consensus 259 ~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g--~~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 259 RKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG--HDVDAISVAQDGGPDLYAL 336 (373)
T ss_pred ccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC--CCcCeEEECCCCCeEEEEE
Confidence 1122445789999888877653 357999999999999888533 2345556666766333333
Q ss_pred c-CCCcccccchhhhc
Q psy11350 427 L-NPGIGNIISSALKE 441 (471)
Q Consensus 427 ~-~~~~~~~~~~~~~~ 441 (471)
. ..+...++......
T Consensus 337 ~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 337 SAGTEVLHIYDAGAGD 352 (373)
T ss_pred cCCCCeEEEEECCCCC
Confidence 2 33434444433333
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.38 E-value=1.7e-10 Score=107.10 Aligned_cols=203 Identities=9% Similarity=-0.006 Sum_probs=136.0
Q ss_pred CCCEEEEEEeeCCCCCCccEEEE-------EeCCCcEEEEeCCCCcceeeecC---CCCcceEEEEECCC-CCEEEEEeC
Q psy11350 194 DCNVGAIEFHPLPSEGAVCSLAS-------CAQDGSVKLWSLDKDTPLANLEG---HEPFRVSRIKFHPS-GRFLGTCCW 262 (471)
Q Consensus 194 ~~~v~~l~~~~~~~~~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~~---~~~~~v~~~~~s~~-~~~i~~~~~ 262 (471)
-....+++|.+++. ++++ +..++.|.+||..+++....... .....+..++++++ |+.+++...
T Consensus 17 ~~~~~~~~~~~~g~-----l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~ 91 (314)
T 1pjx_A 17 IPGAEGPVFDKNGD-----FYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR 91 (314)
T ss_dssp CTTCEEEEECTTSC-----EEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT
T ss_pred CCCccCceECCCCC-----EEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC
Confidence 34567999998876 5556 46789999999877765432220 01126889999999 765555544
Q ss_pred CCeEEeccc--cccc-c----CCCCcceEEEEECCCCCEEEEEecC---------------CeEEEEECCCCcEEEEeeC
Q psy11350 263 DHSWRLDTP--LANL-E----GHEPFRVSRIKFHPSGRFLGTCCWD---------------HSWRLWDLNQGQEVLHQEG 320 (471)
Q Consensus 263 d~~~~~~~~--~~~~-~----~~~~~~v~~l~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~ 320 (471)
++.+.+... ...+ . ......+.+++++++|+++++...+ +.|..||.. ++... +..
T Consensus 92 ~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~ 169 (314)
T 1pjx_A 92 LGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDT 169 (314)
T ss_dssp TEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEE
T ss_pred CCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-ecc
Confidence 444333211 1111 1 1112347899999999877776554 578888876 54433 223
Q ss_pred CCCCeEEEEEe----CCCCEEEEE-eCCCeEEEEeCC-CCe-----eEEEecccC-cCEEEEEEcCCCCEEEEEeCCCcE
Q psy11350 321 HGKPVYCMSFQ----GDGSVVATG-GLDAFGRVWDLR-TGR-----CIMFLEGHL-KSVFSVDFSPDGYHLATGSEDNAV 388 (471)
Q Consensus 321 ~~~~v~~~~~s----~d~~~l~t~-~~dg~i~iwd~~-~~~-----~~~~~~~h~-~~v~~~~~sp~~~~l~s~s~dg~i 388 (471)
+......++|+ |+++.|+.+ ..++.|.+||+. +++ ....+.++. ..+..++++++|+++++...++.|
T Consensus 170 ~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i 249 (314)
T 1pjx_A 170 AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI 249 (314)
T ss_dssp EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 33456889999 999755544 567899999986 454 233344444 668899999999988888888999
Q ss_pred EEEECCCccchheec
Q psy11350 389 KIWDLRKRRLLKWCT 403 (471)
Q Consensus 389 ~iwd~~~~~~~~~~~ 403 (471)
.+||..+++.+..+.
T Consensus 250 ~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIR 264 (314)
T ss_dssp EEECTTCBSCSEEEE
T ss_pred EEEcCCCCcEeEEEe
Confidence 999998787766554
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.36 E-value=2.8e-11 Score=114.32 Aligned_cols=228 Identities=11% Similarity=-0.028 Sum_probs=150.9
Q ss_pred cCCcCeEEEEEecCCCEEEEEeC-----CCcEEEEeCCCCceEEEeecC------CCCEEEEEEeeCCCCCCccEEEEEe
Q psy11350 150 GDTRPISYCSFSPDSQHVATASW-----SGLCKLWTVPECELVQTFRGH------DCNVGAIEFHPLPSEGAVCSLASCA 218 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~~-----dg~i~iwd~~~~~~~~~~~~h------~~~v~~l~~~~~~~~~~~~~l~s~~ 218 (471)
+|-..+.+++|+++|+++++-.. ++.|.+||+.+++.+..+..+ ...+..+++.+.+.. ++++..
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~----~yvtd~ 139 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNF----VYISDP 139 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTE----EEEEEC
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCE----EEEEcC
Confidence 56778999999999876665433 578999999999877766532 235688999986542 445555
Q ss_pred ---CCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEE
Q psy11350 219 ---QDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFL 295 (471)
Q Consensus 219 ---~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 295 (471)
.++.|.+||+.+++....+..+.........+.++|..+.+...++.+..+. ..+..|+|+|+++.|
T Consensus 140 ~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~----------~~~~gia~s~dg~~l 209 (343)
T 2qe8_A 140 APDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH----------LGVNGIVLDAENEWL 209 (343)
T ss_dssp CSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC----------CCEEEEEECTTSCEE
T ss_pred ccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee----------cccceeEeccCCCEE
Confidence 6789999999888766655443211110133444566665555555543221 246889999999999
Q ss_pred EEEecCC-eEEEEECC---CCc-----EE--EEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecc-c
Q psy11350 296 GTCCWDH-SWRLWDLN---QGQ-----EV--LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG-H 363 (471)
Q Consensus 296 ~~~~~dg-~i~iwd~~---~~~-----~~--~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-h 363 (471)
+++...+ .|..++.. .+. .. ....++......++++++|.++++...++.|.+||..+++....... +
T Consensus 210 y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~ 289 (343)
T 2qe8_A 210 YLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEK 289 (343)
T ss_dssp EEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGG
T ss_pred EEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCc
Confidence 8887766 55555532 110 00 01112334556789999999999998999999999856764333322 2
Q ss_pred CcCEEEEEEcCCCCEEEEEeCCCcEEEE
Q psy11350 364 LKSVFSVDFSPDGYHLATGSEDNAVKIW 391 (471)
Q Consensus 364 ~~~v~~~~~sp~~~~l~s~s~dg~i~iw 391 (471)
...+.+++|.+++.++++.+..+.+.+|
T Consensus 290 ~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 290 LSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp GSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred eecCCeeEECCCCcEEEEeCcccccccc
Confidence 4568999999998888887655544433
No 215
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.33 E-value=3.2e-11 Score=114.16 Aligned_cols=147 Identities=16% Similarity=0.058 Sum_probs=116.6
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEe--cccc-----------ccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECC
Q psy11350 244 RVSRIKFHPSGRFLGTCCWDHSWRL--DTPL-----------ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN 310 (471)
Q Consensus 244 ~v~~~~~s~~~~~i~~~~~d~~~~~--~~~~-----------~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~ 310 (471)
.++.+++++....+++|+.++.... .... .......+. |+.|+| ++++|+++ .++.|++||+.
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 6889999999999999999877332 1111 111112244 999999 89999999 88999999998
Q ss_pred CCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEE
Q psy11350 311 QGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKI 390 (471)
Q Consensus 311 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~i 390 (471)
+......+..|..++.++.+.+.. +++++.||.|.+||+.++.... +...|++++|||+| ++.|..||++++
T Consensus 115 sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~ 186 (388)
T 1xip_A 115 ELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQS 186 (388)
T ss_dssp STTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEE
T ss_pred hhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEE
Confidence 877666677788889888877653 8888999999999999887643 45689999999999 678999999999
Q ss_pred EECCCccc--hhee
Q psy11350 391 WDLRKRRL--LKWC 402 (471)
Q Consensus 391 wd~~~~~~--~~~~ 402 (471)
|+...+.. .+++
T Consensus 187 ~~~~~~~~~~k~~I 200 (388)
T 1xip_A 187 FAWRNGEMEKQFEF 200 (388)
T ss_dssp EEEETTEEEEEEEE
T ss_pred EcCCCcccccccee
Confidence 99887765 4455
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.33 E-value=1.9e-09 Score=99.41 Aligned_cols=204 Identities=13% Similarity=0.047 Sum_probs=135.1
Q ss_pred CCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecc--
Q psy11350 193 HDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-- 270 (471)
Q Consensus 193 h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~-- 270 (471)
+..-.-+..|+|+... ++++...++.|..||..++.. ..+... ..+.+++++++|+++++ ..++.+.+..
T Consensus 11 ~~~~~Egp~w~~~~~~----l~~~d~~~~~i~~~d~~~~~~-~~~~~~--~~~~~i~~~~dG~l~v~-~~~~l~~~d~~~ 82 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNS----LLFVDIPAKKVCRWDSFTKQV-QRVTMD--APVSSVALRQSGGYVAT-IGTKFCALNWKE 82 (297)
T ss_dssp CCSBEEEEEEETTTTE----EEEEETTTTEEEEEETTTCCE-EEEECS--SCEEEEEEBTTSSEEEE-ETTEEEEEETTT
T ss_pred CCccccCCeEECCCCE----EEEEECCCCEEEEEECCCCcE-EEEeCC--CceEEEEECCCCCEEEE-ECCeEEEEECCC
Confidence 3344568899996653 667777789999999987654 233222 37899999999995544 4554433321
Q ss_pred c-ccccc----CCCCcceEEEEECCCCCEEEEEec-----------CCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCC
Q psy11350 271 P-LANLE----GHEPFRVSRIKFHPSGRFLGTCCW-----------DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334 (471)
Q Consensus 271 ~-~~~~~----~~~~~~v~~l~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~ 334 (471)
. ...+. ......+..++++|+|+++++... .+.|..++.. ++. ..+..+....+.++|+||+
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~-~~~~~~~~~pngi~~spdg 160 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHV-KKYFDQVDISNGLDWSLDH 160 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCE-EEEEEEESBEEEEEECTTS
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCE-EEEeeccccccceEEcCCC
Confidence 1 11111 111235889999999996665432 2344445443 332 2233334456899999999
Q ss_pred CEEE-EEeCCCeEEEEeC--CCCee-----EEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccC
Q psy11350 335 SVVA-TGGLDAFGRVWDL--RTGRC-----IMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLL 406 (471)
Q Consensus 335 ~~l~-t~~~dg~i~iwd~--~~~~~-----~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 406 (471)
+.|+ +.+.++.|.+|++ .++.. ...+..+.+.+..++++++|++.++....+.|..||..+++.+..+..+.
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV 240 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC
Confidence 8664 5556789999987 45542 22333344678999999999988888888899999999999888776543
No 217
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.33 E-value=3e-13 Score=129.08 Aligned_cols=190 Identities=14% Similarity=0.007 Sum_probs=111.9
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCC
Q psy11350 163 DSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP 242 (471)
Q Consensus 163 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 242 (471)
++..|++++.||.|+.||..+|+.+..+.. ..+.+..+..++. ++++++.||.|..||..+++.+..+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~-----~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEP-----AFLPDPNDGSLYTLGSKNNEGLTKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----C-----CEEECTTTCCEEEC-----CCSEECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCC-----EEEEeCCCCEEEEEECCCCceeeeeeccCc
Confidence 578899999999999999999999988876 4555555555554 577778999999999988877665543211
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCC
Q psy11350 243 FRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322 (471)
Q Consensus 243 ~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 322 (471)
. ... ..++ +. .+..+++++.++.|+.||..+|+.+..+..+.
T Consensus 81 ~-------------------------------~~~--~sp~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~ 122 (369)
T 2hz6_A 81 E-------------------------------LVQ--ASPC----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF 122 (369)
T ss_dssp H-------------------------------HHT--TCSC----C------CCCCEEEEEEEEECCC------------
T ss_pred c-------------------------------ccc--cCce----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC
Confidence 0 000 0011 01 24567788889999999999999887766543
Q ss_pred CCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCC---CEEEEEeCCCcEEEEECCCccch
Q psy11350 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG---YHLATGSEDNAVKIWDLRKRRLL 399 (471)
Q Consensus 323 ~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~---~~l~s~s~dg~i~iwd~~~~~~~ 399 (471)
...++|++..+++++.++.|+.||.++|+.+..+..+. ....++.++. ..+++++.||.|..||..+++.+
T Consensus 123 ----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 123 ----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp --------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred ----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence 23456788899999999999999999998765554221 1223333332 55777889999999999999987
Q ss_pred heec
Q psy11350 400 KWCT 403 (471)
Q Consensus 400 ~~~~ 403 (471)
....
T Consensus 197 W~~~ 200 (369)
T 2hz6_A 197 WIQN 200 (369)
T ss_dssp EEEE
T ss_pred EEec
Confidence 6554
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=2.9e-10 Score=107.37 Aligned_cols=207 Identities=9% Similarity=-0.064 Sum_probs=133.2
Q ss_pred cCeEEEEEecCCCEEEEEe--CCCcEEEEeCCCCceEEEee-------cCCCCEEEEEEeeCCCCCCccEEEEEeC----
Q psy11350 153 RPISYCSFSPDSQHVATAS--WSGLCKLWTVPECELVQTFR-------GHDCNVGAIEFHPLPSEGAVCSLASCAQ---- 219 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~--~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~~~~~~l~s~~~---- 219 (471)
..+..++++|+|+++++.. .++.++||.+.+++. ..+. .|-..+..+++.+++. ++++...
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~-----L~v~D~g~~~~ 90 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGI-----VWMLDNGNQSK 90 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSE-----EEEEECHHHHT
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCc-----EEEEcCCCCcC
Confidence 6789999999999888864 234355555545543 2221 3456789999999875 4444333
Q ss_pred -CCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEE
Q psy11350 220 -DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTC 298 (471)
Q Consensus 220 -dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~ 298 (471)
++.|.+||+.+++.+..+..... ...+ ...+..+++++++..++.+
T Consensus 91 ~~~~i~~~d~~tg~~~~~~~~~~~--------------------------------~~~~-~~~~~~v~vd~~~g~~yvt 137 (343)
T 2qe8_A 91 SVPKLVAWDTLNNQLSRVIYLPPP--------------------------------ITLS-NSFVNDLAVDLIHNFVYIS 137 (343)
T ss_dssp SCCEEEEEETTTTEEEEEEECCTT--------------------------------TSCT-TCCCCEEEEETTTTEEEEE
T ss_pred CCCeEEEEECCCCeEEEEEECChh--------------------------------hccc-ccccceEEEecCCCEEEEE
Confidence 57899999988876665543211 0000 1235677787755444433
Q ss_pred -e---cCCeEEEEECCCCcEEEEeeCCC-----------------------------CCeEEEEEeCCCCEEEEEeCCC-
Q psy11350 299 -C---WDHSWRLWDLNQGQEVLHQEGHG-----------------------------KPVYCMSFQGDGSVVATGGLDA- 344 (471)
Q Consensus 299 -~---~dg~i~iwd~~~~~~~~~~~~~~-----------------------------~~v~~~~~s~d~~~l~t~~~dg- 344 (471)
. .++.|.+||+.+++....+.+|. ..+..++|+|||+.|+.+...+
T Consensus 138 d~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~ 217 (343)
T 2qe8_A 138 DPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST 217 (343)
T ss_dssp ECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS
T ss_pred cCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC
Confidence 3 46778888887776555443321 2368899999999888887766
Q ss_pred eEEEEeCC---CCe-----eEE--EecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccc
Q psy11350 345 FGRVWDLR---TGR-----CIM--FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398 (471)
Q Consensus 345 ~i~iwd~~---~~~-----~~~--~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 398 (471)
.++.++.. .+. ... ...++.+....++++++|.++++...++.|.+||..+++.
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~ 281 (343)
T 2qe8_A 218 SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAY 281 (343)
T ss_dssp EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEE
T ss_pred eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCE
Confidence 55555432 110 000 1113444667899999999999999999999999855654
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.32 E-value=2.7e-10 Score=109.33 Aligned_cols=263 Identities=13% Similarity=-0.002 Sum_probs=168.7
Q ss_pred cCCCEEEEEeCC-----CcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEe----------CCCcEEEE
Q psy11350 162 PDSQHVATASWS-----GLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA----------QDGSVKLW 226 (471)
Q Consensus 162 ~~~~~l~tg~~d-----g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~----------~dg~i~iw 226 (471)
|+++++++.... +.|.++|+.+++.+..+..-..+ .+.++|++.. ++.+. .++.|.++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~-----lyVan~~~~~~~~G~~~~~Vsvi 154 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSF-----FAQASTVFERIARGKRTDYVEVF 154 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSC-----EEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCE-----EEEEeccccccccCCCCCEEEEE
Confidence 566777666543 69999999999999999865666 8999999984 54443 46789999
Q ss_pred eCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEec--CCeE
Q psy11350 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW--DHSW 304 (471)
Q Consensus 227 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i 304 (471)
|..+++.+..+..... ..... ......+.|+|+|++++++.. ++.|
T Consensus 155 D~~t~~vv~~I~v~g~-----------------------------~r~~~---g~~P~~~~~spDGk~lyV~n~~~~~~V 202 (426)
T 3c75_H 155 DPVTFLPIADIELPDA-----------------------------PRFLV---GTYQWMNALTPDNKNLLFYQFSPAPAV 202 (426)
T ss_dssp CTTTCCEEEEEEETTC-----------------------------CCCCB---SCCGGGSEECTTSSEEEEEECSSSCEE
T ss_pred ECCCCcEEEEEECCCc-----------------------------ccccc---CCCcceEEEcCCCCEEEEEecCCCCeE
Confidence 9999987776642200 00000 012446889999999998874 5789
Q ss_pred EEEECCCCcEEEEeeCCCCCeEEEEEeCCC-CEEEEEeCCCeEEEEeCCCCeeEEE----ecccCcCE-EEEEEcCCCCE
Q psy11350 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDG-SVVATGGLDAFGRVWDLRTGRCIMF----LEGHLKSV-FSVDFSPDGYH 378 (471)
Q Consensus 305 ~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~t~~~dg~i~iwd~~~~~~~~~----~~~h~~~v-~~~~~sp~~~~ 378 (471)
.++|+.+++.+..+.-... ....|++ ..+++.+.||.+.+.++.+++.... +.....++ ..+.|.+++..
T Consensus 203 sVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~ 278 (426)
T 3c75_H 203 GVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGR 278 (426)
T ss_dssp EEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCE
T ss_pred EEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCE
Confidence 9999999998887764221 2333433 5566667788887777755554422 21111221 23568999888
Q ss_pred EEEEeCCCcEEEEECCCccc--hheecc---------cCCCccceeeccccce-eeeecccC--------CCcccccchh
Q psy11350 379 LATGSEDNAVKIWDLRKRRL--LKWCTQ---------LLPNSIGVTSLLTDLY-IDVLESLN--------PGIGNIISSA 438 (471)
Q Consensus 379 l~s~s~dg~i~iwd~~~~~~--~~~~~~---------~~~~~~~~~~~~~d~~-~~~~~~~~--------~~~~~~~~~~ 438 (471)
++..+..+.|.+.|+..... +..+.. ..+.....+.+..+.. +.+..... .+...++...
T Consensus 279 ~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~ 358 (426)
T 3c75_H 279 LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE 358 (426)
T ss_dssp EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC
Confidence 87778889999999865532 111110 1122222234455533 33332211 1234456666
Q ss_pred hhcccccceeeecccceeeeecCC-eEEEe
Q psy11350 439 LKEQVEPIPLLLDIQKLTFKFDSD-LHAMV 467 (471)
Q Consensus 439 ~~~~~~~~~~~~~~~~l~fs~dg~-~lA~~ 467 (471)
....+..++.......++|+|||+ +|.+.
T Consensus 359 T~kvv~~I~vg~~P~gia~spDg~~~lyv~ 388 (426)
T 3c75_H 359 TGERINKIELGHEIDSINVSQDAEPLLYAL 388 (426)
T ss_dssp TCCEEEEEEEEEEECEEEECCSSSCEEEEE
T ss_pred CCeEEEEEECCCCcCeEEEccCCCEEEEEE
Confidence 667777888777789999999999 55443
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.31 E-value=2e-10 Score=108.37 Aligned_cols=232 Identities=8% Similarity=-0.082 Sum_probs=150.5
Q ss_pred EEEEecCCCEEEEEe----------CCCcEEEEeCCCCceEEEeecCC-------CCEEEEEEeeCCCCCCccEEEEEeC
Q psy11350 157 YCSFSPDSQHVATAS----------WSGLCKLWTVPECELVQTFRGHD-------CNVGAIEFHPLPSEGAVCSLASCAQ 219 (471)
Q Consensus 157 ~~~~s~~~~~l~tg~----------~dg~i~iwd~~~~~~~~~~~~h~-------~~v~~l~~~~~~~~~~~~~l~s~~~ 219 (471)
.+.|+||+++|+++. .++.|.+||+.+++.+.++..+. .....+.++|++. +++.+..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk-----~lyVan~ 143 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSA-----CLLFFLF 143 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSS-----CEEEEEC
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCC-----EEEEEcc
Confidence 799999999999886 36889999999999999986431 2345899999998 4666653
Q ss_pred --CCcEEE--EeCCCCcceeeecCCCCc------ceEEEEECCCCCEEEEEeCC-----CeEEeccccccccCCCCcceE
Q psy11350 220 --DGSVKL--WSLDKDTPLANLEGHEPF------RVSRIKFHPSGRFLGTCCWD-----HSWRLDTPLANLEGHEPFRVS 284 (471)
Q Consensus 220 --dg~i~i--wd~~~~~~~~~~~~~~~~------~v~~~~~s~~~~~i~~~~~d-----~~~~~~~~~~~~~~~~~~~v~ 284 (471)
+..|.+ +|+.+ +..+...... .-.-+.++++|+.++..... +.+..... ..+.. ...+.
T Consensus 144 ~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t-~~i~v-g~~P~- 217 (368)
T 1mda_H 144 GSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCT-GAQNC-SSQAA- 217 (368)
T ss_dssp SSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSC-TTSCB-CSCCE-
T ss_pred CCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEee-eeeeC-CCCcc-
Confidence 467888 99876 3444321110 00113444555554433322 22111000 01111 11222
Q ss_pred EEEECCCCCEEEEEecCCeEEEEECCCCc--EEEEeeC-------CC---CCeEEEEEeCCCCEEEEEeC---------C
Q psy11350 285 RIKFHPSGRFLGTCCWDHSWRLWDLNQGQ--EVLHQEG-------HG---KPVYCMSFQGDGSVVATGGL---------D 343 (471)
Q Consensus 285 ~l~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~-------~~---~~v~~~~~s~d~~~l~t~~~---------d 343 (471)
. .+++..++..+. +.|.+.|+.... .+..+.. +. .....++|+||++.++++.. +
T Consensus 218 --~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~ 293 (368)
T 1mda_H 218 --Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAA 293 (368)
T ss_dssp --E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCE
T ss_pred --c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccC
Confidence 3 666676666666 999999997542 2222211 00 11112689999998887543 2
Q ss_pred CeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCC-EEEEEe-CCCcEEEEECCCccchheecc
Q psy11350 344 AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY-HLATGS-EDNAVKIWDLRKRRLLKWCTQ 404 (471)
Q Consensus 344 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s-~dg~i~iwd~~~~~~~~~~~~ 404 (471)
+.+.++|+.+.+.+.++.... ...+|+|+|||+ .+++.. .++.|.++|+.+++.+.++..
T Consensus 294 ~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 294 ENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp EEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred CCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC
Confidence 356799999999988887443 689999999997 566666 599999999999999988764
No 221
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.30 E-value=2.1e-09 Score=103.80 Aligned_cols=195 Identities=9% Similarity=0.015 Sum_probs=134.5
Q ss_pred CCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCC--eEEecccc
Q psy11350 195 CNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH--SWRLDTPL 272 (471)
Q Consensus 195 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~--~~~~~~~~ 272 (471)
.....|+|++++. ++++...++.|++||..++.......... ... ++|+++++.++++..++ .+......
T Consensus 131 ~~P~~la~d~~g~-----lyv~d~~~~~I~~id~~~g~~~~~~~~~~--~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-----VLAYQRDDPRVRLISVDDNKVTTVHPGFK--GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTE-----EEEEETTTTEEEEEETTTTEEEEEEETCC--BCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CCceEEEEeCCCC-----EEEEecCCCcEEEEECCCCEEEEeeccCC--CCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 3578999998886 66777777999999998776655444322 334 99999999998888765 33221111
Q ss_pred -----ccc---cCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEE----eeCCCCCe--EEEEEeCC-CCEE
Q psy11350 273 -----ANL---EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH----QEGHGKPV--YCMSFQGD-GSVV 337 (471)
Q Consensus 273 -----~~~---~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~v--~~~~~s~d-~~~l 337 (471)
..+ ..+....+.+++++|++..|+++..++.|+.||..++..... ..++...- ..++|+|+ +.++
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 111 121234578899999666666677789999999987754332 22222222 38999995 6666
Q ss_pred EEEeCCCeEEEEeCCCCeeEEEecccC---------------cCEEEEEEcCCCCEEEEEe-CCCcEEEEECCCccch
Q psy11350 338 ATGGLDAFGRVWDLRTGRCIMFLEGHL---------------KSVFSVDFSPDGYHLATGS-EDNAVKIWDLRKRRLL 399 (471)
Q Consensus 338 ~t~~~dg~i~iwd~~~~~~~~~~~~h~---------------~~v~~~~~sp~~~~l~s~s-~dg~i~iwd~~~~~~~ 399 (471)
++....+.|+.|+.... +..+.++. .....++++|+|+++++-+ .++.|+.|++.+++..
T Consensus 283 v~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS 358 (409)
T ss_dssp EEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE
T ss_pred EEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE
Confidence 66677889999997643 33333332 3588999999999888877 8899999998777643
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.28 E-value=4.9e-09 Score=98.08 Aligned_cols=195 Identities=15% Similarity=0.004 Sum_probs=129.6
Q ss_pred EEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecc--c-cc
Q psy11350 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT--P-LA 273 (471)
Q Consensus 197 v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~--~-~~ 273 (471)
..++.|+|++.. ++++...++.|..||..+++.. .+.. ...+.++.|+++|+++++. .++.+.+.. . ..
T Consensus 51 ~egp~~~~~~~~----l~~~d~~~~~i~~~d~~~~~~~-~~~~--~~~v~~i~~~~dg~l~v~~-~~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 51 GEGPTFDPASGT----AWWFNILERELHELHLASGRKT-VHAL--PFMGSALAKISDSKQLIAS-DDGLFLRDTATGVLT 122 (326)
T ss_dssp EEEEEEETTTTE----EEEEEGGGTEEEEEETTTTEEE-EEEC--SSCEEEEEEEETTEEEEEE-TTEEEEEETTTCCEE
T ss_pred CcCCeEeCCCCE----EEEEECCCCEEEEEECCCCcEE-EEEC--CCcceEEEEeCCCeEEEEE-CCCEEEEECCCCcEE
Confidence 457889997653 5677777899999999876543 2322 2378999999999877754 455433321 1 11
Q ss_pred cccC----CCCcceEEEEECCCCCEEEEEec------CCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEE-eC
Q psy11350 274 NLEG----HEPFRVSRIKFHPSGRFLGTCCW------DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATG-GL 342 (471)
Q Consensus 274 ~~~~----~~~~~v~~l~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~-~~ 342 (471)
.+.. .....+..+.++|+|+++++... .+.|..++ +++.. .+..+......++|+||++.|+.+ +.
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETT
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECC
Confidence 1111 11235889999999997665432 25677777 45433 332333456789999999866554 45
Q ss_pred CCeEEEEeCC--CC-e-----eEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 343 DAFGRVWDLR--TG-R-----CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 343 dg~i~iwd~~--~~-~-----~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
++.|.+||+. ++ . ....+......+..++++++|.++++...++.|.+||. +++.+..+.
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~ 267 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE 267 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEE
Confidence 7899999986 55 3 22333334456789999999998887777789999998 566665554
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.26 E-value=5.1e-10 Score=115.13 Aligned_cols=253 Identities=11% Similarity=0.010 Sum_probs=165.8
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceEEEeecC-C----CCEEEEEEeeCCCCCCccEEEEEeC------CCcEEEEeCCCC
Q psy11350 163 DSQHVATASWSGLCKLWTVPECELVQTFRGH-D----CNVGAIEFHPLPSEGAVCSLASCAQ------DGSVKLWSLDKD 231 (471)
Q Consensus 163 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h-~----~~v~~l~~~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~ 231 (471)
++..|++++.|+.|..+|..+|+.+..+..+ . ..+.+--....+ .++.++. +|.|..||..+|
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~------~v~v~~~~~~~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKG------KVIIGNGGAEYGVRGYITAYDAETG 200 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETT------EEEECCBCTTTCCBCEEEEEETTTC
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECC------EEEEEecccccCCCCEEEEEECCCC
Confidence 4578888999999999999999999888754 2 112111111122 3555543 699999999999
Q ss_pred cceeeecCCCCc-------------------------------ceEEEEECCCCCEEEEEeCCCe---------------
Q psy11350 232 TPLANLEGHEPF-------------------------------RVSRIKFHPSGRFLGTCCWDHS--------------- 265 (471)
Q Consensus 232 ~~~~~~~~~~~~-------------------------------~v~~~~~s~~~~~i~~~~~d~~--------------- 265 (471)
+.+..+...... ....++++|++..+++++.++.
T Consensus 201 ~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~ 280 (677)
T 1kb0_A 201 ERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNL 280 (677)
T ss_dssp CEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCT
T ss_pred cEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCe
Confidence 988776542211 1135788899998888776542
Q ss_pred ----E-Ee--ccccc--ccc--CCC------CcceEEEEECCCC---CEEEEEecCCeEEEEECCCCcEEEEeeCCC---
Q psy11350 266 ----W-RL--DTPLA--NLE--GHE------PFRVSRIKFHPSG---RFLGTCCWDHSWRLWDLNQGQEVLHQEGHG--- 322 (471)
Q Consensus 266 ----~-~~--~~~~~--~~~--~~~------~~~v~~l~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--- 322 (471)
+ -+ .+... .+. .+. ......+....+| ..++.++.+|.|+++|..+++.+..+....
T Consensus 281 ~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~ 360 (677)
T 1kb0_A 281 YLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNW 360 (677)
T ss_dssp TTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS
T ss_pred eeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCc
Confidence 1 11 11000 000 010 1112222333366 678899999999999999999876654211
Q ss_pred --------CCe------------------------EEEEEeCCCCEEEEEeC----------------------------
Q psy11350 323 --------KPV------------------------YCMSFQGDGSVVATGGL---------------------------- 342 (471)
Q Consensus 323 --------~~v------------------------~~~~~s~d~~~l~t~~~---------------------------- 342 (471)
.++ ..++|+|++.++++...
T Consensus 361 ~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 440 (677)
T 1kb0_A 361 ASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGW 440 (677)
T ss_dssp EEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTC
T ss_pred ccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccc
Confidence 111 15688998888887543
Q ss_pred ---------------CCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccCC
Q psy11350 343 ---------------DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLP 407 (471)
Q Consensus 343 ---------------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 407 (471)
.|.|..||+.+++.+..+. +..++....+...+..++.++.||.+++||.++++.+..+.....
T Consensus 441 ~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 519 (677)
T 1kb0_A 441 NTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG 519 (677)
T ss_dssp CCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred ccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCC
Confidence 2789999999999887775 334455556667788899999999999999999999998876654
Q ss_pred Cccceeeccccceee
Q psy11350 408 NSIGVTSLLTDLYID 422 (471)
Q Consensus 408 ~~~~~~~~~~d~~~~ 422 (471)
.....++...+....
T Consensus 520 ~~~~p~~y~~~G~~~ 534 (677)
T 1kb0_A 520 VVAAPSTYMVDGRQY 534 (677)
T ss_dssp CCSCCEEEEETTEEE
T ss_pred cccCCEEEEeCCEEE
Confidence 333334433444333
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.20 E-value=2.6e-09 Score=98.91 Aligned_cols=231 Identities=13% Similarity=0.016 Sum_probs=139.3
Q ss_pred eEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCe
Q psy11350 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265 (471)
Q Consensus 186 ~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~ 265 (471)
.+..+...........|+|++.. ++++...++.|..|+. ++. ...+...
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~----l~~~d~~~~~i~~~~~-~g~-~~~~~~~------------------------- 84 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRT----LVWSDLVGRRVLGWRE-DGT-VDVLLDA------------------------- 84 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTE----EEEEETTTTEEEEEET-TSC-EEEEEES-------------------------
T ss_pred ceEEEecCCcCccCCeEeCCCCE----EEEEECCCCEEEEEeC-CCC-EEEEeCC-------------------------
Confidence 33444444566788999999873 5677778899999987 443 2222211
Q ss_pred EEeccccccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee---C-CCCCeEEEEEeCCCCEEEE--
Q psy11350 266 WRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE---G-HGKPVYCMSFQGDGSVVAT-- 339 (471)
Q Consensus 266 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~-~~~~v~~~~~s~d~~~l~t-- 339 (471)
...+..++++++|+++++...++.|.+|+.. ++...... + ....+++++++|+|+++++
T Consensus 85 --------------~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~ 149 (305)
T 3dr2_A 85 --------------TAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDP 149 (305)
T ss_dssp --------------CSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECC
T ss_pred --------------CCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCc
Confidence 1247788999999866665556789999986 54322211 1 1134668999999998886
Q ss_pred --EeC-------------CCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCC------CcEEEEECCCccc
Q psy11350 340 --GGL-------------DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED------NAVKIWDLRKRRL 398 (471)
Q Consensus 340 --~~~-------------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d------g~i~iwd~~~~~~ 398 (471)
|.. .+.|+.||..+++..... .......++|+|+++.|+.+... +.|.+|++..+.
T Consensus 150 ~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~- 226 (305)
T 3dr2_A 150 PFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA- 226 (305)
T ss_dssp SGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-
T ss_pred CCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-
Confidence 432 256888887777654333 44567899999999988777665 689999987654
Q ss_pred hh---eecccCCCccceeeccccceeeeecccCCCcccccchhhhcccccceeeecccceeeeecCCeEEEeec
Q psy11350 399 LK---WCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPIPLLLDIQKLTFKFDSDLHAMVLN 469 (471)
Q Consensus 399 ~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fs~dg~~lA~~~~ 469 (471)
+. .+.........-+.+..+.. +|.....+ ...+.. ....+..+........++|+|+++.|.+..+
T Consensus 227 l~~~~~~~~~~~~~pdgi~~d~~G~--lwv~~~~g-v~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 227 LHDRRHFASVPDGLPDGFCVDRGGW--LWSSSGTG-VCVFDS-DGQLLGHIPTPGTASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp EEEEEEEECCSSSCCCSEEECTTSC--EEECCSSE-EEEECT-TSCEEEEEECSSCCCEEEECTTSCEEEEEET
T ss_pred ccCCeEEEECCCCCCCeEEECCCCC--EEEecCCc-EEEECC-CCCEEEEEECCCceeEEEEeCCCCEEEEEcC
Confidence 21 11111111111122233333 33333222 112221 2223333333335678999999999988765
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.17 E-value=3.4e-09 Score=109.29 Aligned_cols=256 Identities=12% Similarity=-0.025 Sum_probs=163.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceEEEeecC--CCCEEEEEEee---CCCCCCccEEEEEe------CCCcEEEEeCCCC
Q psy11350 163 DSQHVATASWSGLCKLWTVPECELVQTFRGH--DCNVGAIEFHP---LPSEGAVCSLASCA------QDGSVKLWSLDKD 231 (471)
Q Consensus 163 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h--~~~v~~l~~~~---~~~~~~~~~l~s~~------~dg~i~iwd~~~~ 231 (471)
++..|++++.|+.|+.+|..+|+.+..+... ......+...| ++ .++.++ .+|.|..||..+|
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g------~v~vg~~~~~~~~~g~v~a~D~~tG 193 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG------KVVIGNGGAEFGVRGYVTAYDAETG 193 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT------EEEECCBCTTTCCBCEEEEEETTTC
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC------EEEEEeCCCccCCCCEEEEEECCCC
Confidence 3568888999999999999999998877642 11111111111 33 344443 3689999999999
Q ss_pred cceeeecCCC--C----------------------------cceEEEEECCCCCEEEEEeCCCe----------------
Q psy11350 232 TPLANLEGHE--P----------------------------FRVSRIKFHPSGRFLGTCCWDHS---------------- 265 (471)
Q Consensus 232 ~~~~~~~~~~--~----------------------------~~v~~~~~s~~~~~i~~~~~d~~---------------- 265 (471)
+.+..+.... . .....++++|++..+++++.++.
T Consensus 194 ~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y 273 (689)
T 1yiq_A 194 KEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLF 273 (689)
T ss_dssp CEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTT
T ss_pred cEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCcee
Confidence 9887764210 0 01125788898888888877652
Q ss_pred ---E---Eecccccc--ccC--C------CCcceEEEEECCCCC---EEEEEecCCeEEEEECCCCcEEEEeeCCC----
Q psy11350 266 ---W---RLDTPLAN--LEG--H------EPFRVSRIKFHPSGR---FLGTCCWDHSWRLWDLNQGQEVLHQEGHG---- 322 (471)
Q Consensus 266 ---~---~~~~~~~~--~~~--~------~~~~v~~l~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---- 322 (471)
+ +..+.... +.. + ....+.......+|+ .++.++.+|.++++|..+++.+.......
T Consensus 274 ~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~ 353 (689)
T 1yiq_A 274 LSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWT 353 (689)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred eeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccc
Confidence 1 11111110 110 1 011111122222454 78889999999999999999874322110
Q ss_pred ------------------------C-----------CeEEEEEeCCCCEEEEEeC-------------------------
Q psy11350 323 ------------------------K-----------PVYCMSFQGDGSVVATGGL------------------------- 342 (471)
Q Consensus 323 ------------------------~-----------~v~~~~~s~d~~~l~t~~~------------------------- 342 (471)
. .-..++|+|+..++++...
T Consensus 354 ~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g 433 (689)
T 1yiq_A 354 KGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLG 433 (689)
T ss_dssp EEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCS
T ss_pred cccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccC
Confidence 0 0112688998888777532
Q ss_pred --------------------CCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchhee
Q psy11350 343 --------------------DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 343 --------------------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
+|.|+.||+.+++.+..+..+. ++..-.+...+.++++|+.||.|+.||.++|+.+..+
T Consensus 434 ~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 434 LRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp SEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceee
Confidence 3789999999999888776443 3333456667889999999999999999999999888
Q ss_pred cccCCCccceeeccccceeeeec
Q psy11350 403 TQLLPNSIGVTSLLTDLYIDVLE 425 (471)
Q Consensus 403 ~~~~~~~~~~~~~~~d~~~~~~~ 425 (471)
..........++...+....+..
T Consensus 513 ~~~~~~~~~p~ty~~~G~qyv~~ 535 (689)
T 1yiq_A 513 PAASGVMAAPVTYSVDGEQYVTF 535 (689)
T ss_dssp ECSSCCCSCCEEEEETTEEEEEE
T ss_pred eCCCCcccCceEEEECCEEEEEE
Confidence 76655444445544555544433
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.14 E-value=8.7e-09 Score=92.01 Aligned_cols=196 Identities=7% Similarity=-0.030 Sum_probs=139.3
Q ss_pred CeEEEEEecCCCEEEEEeC--CCcEEEEeCCCCceEEEeecCCC-CEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC
Q psy11350 154 PISYCSFSPDSQHVATASW--SGLCKLWTVPECELVQTFRGHDC-NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK 230 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~--dg~i~iwd~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 230 (471)
....+.|+|++.+.++.+. ++.|.++|+.+++.+..+..... ....+++. +.. +.++.-.++.+.++|..+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~----lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEK----LYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTE----EEEEETTCSEEEEEETTT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCE----EEEEEecCCEEEEEECCC
Confidence 3678999998744444442 57999999999999988763222 22345554 332 455666789999999999
Q ss_pred CcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECC
Q psy11350 231 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN 310 (471)
Q Consensus 231 ~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~ 310 (471)
.+.+..+....+ . ...++++|+.++++..++.|.++|..
T Consensus 96 ~~v~~~i~~g~~-------------------------------------~----g~glt~Dg~~l~vs~gs~~l~viD~~ 134 (266)
T 2iwa_A 96 LSNIKNFTHQMK-------------------------------------D----GWGLATDGKILYGSDGTSILYEIDPH 134 (266)
T ss_dssp TEEEEEEECCSS-------------------------------------S----CCEEEECSSSEEEECSSSEEEEECTT
T ss_pred CcEEEEEECCCC-------------------------------------C----eEEEEECCCEEEEECCCCeEEEEECC
Confidence 888777653211 1 12244577777777778999999999
Q ss_pred CCcEEEEeeCCC-----CCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEeccc-------------CcCEEEEEE
Q psy11350 311 QGQEVLHQEGHG-----KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH-------------LKSVFSVDF 372 (471)
Q Consensus 311 ~~~~~~~~~~~~-----~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~~~~ 372 (471)
+.+.+..+.-.. ..++.+.|. +|.+.+....++.|.+.|..+++.+..+... ......|+|
T Consensus 135 t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~ 213 (266)
T 2iwa_A 135 TFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAW 213 (266)
T ss_dssp TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEE
T ss_pred CCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEE
Confidence 988877765321 236788888 7766555556889999999999988887632 135789999
Q ss_pred cCCCCE-EEEEeCCCcEEEEECCCcc
Q psy11350 373 SPDGYH-LATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 373 sp~~~~-l~s~s~dg~i~iwd~~~~~ 397 (471)
+|+++. ++++...+.|.+.++....
T Consensus 214 ~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 214 DQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp ETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred cCCCCEEEEECCCCCeEEEEEEeccc
Confidence 998764 5566677889998887653
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.08 E-value=3.7e-09 Score=109.51 Aligned_cols=194 Identities=16% Similarity=0.093 Sum_probs=126.3
Q ss_pred CCCCEEEEEEeeCCCCCCccEEE-EEeC----CCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCe--
Q psy11350 193 HDCNVGAIEFHPLPSEGAVCSLA-SCAQ----DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-- 265 (471)
Q Consensus 193 h~~~v~~l~~~~~~~~~~~~~l~-s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~-- 265 (471)
|...+..++|+|++. +|+ +.+. ...|++||+.+++.+..... ......++|+ ||+.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~-----~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~--~~k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 127 GTTALDQLSFSRDGR-----ILAYSLSLAGSDWREIHLMDVESKQPLETPLK--DVKFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp SCCEEEEEEECTTSS-----EEEEEEECSSCCEEEEEEEETTTCSEEEEEEE--EEESCCCEEE-TTTEEEEEESSCCC-
T ss_pred CcEEEEEEEECCCCC-----EEEEEEecCCCceEEEEEEECCCCCCCccccC--CceeccEEEe-CCCEEEEEEecCccc
Confidence 455788999999998 454 3322 35799999999986543111 0013567899 9999998887732
Q ss_pred -----------EE---eccccc----cccCCC--CcceEEEEECCCCCEEEEEec----CCeEEEEECCCCc-EEEEeeC
Q psy11350 266 -----------WR---LDTPLA----NLEGHE--PFRVSRIKFHPSGRFLGTCCW----DHSWRLWDLNQGQ-EVLHQEG 320 (471)
Q Consensus 266 -----------~~---~~~~~~----~~~~~~--~~~v~~l~~~~~~~~l~~~~~----dg~i~iwd~~~~~-~~~~~~~ 320 (471)
+. +.+... .+.... ...+..+.|+|+|++|+.... .+.|+++|+.++. ....+..
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence 22 222221 112211 234678999999998865543 2489999998764 3455666
Q ss_pred CCCCeEEEEEeCCCCEEE-EEeCC---CeEEEEeCCCCee--EEEecccCcCEEEEEEcCCCCEEEEEeCCC---cEEEE
Q psy11350 321 HGKPVYCMSFQGDGSVVA-TGGLD---AFGRVWDLRTGRC--IMFLEGHLKSVFSVDFSPDGYHLATGSEDN---AVKIW 391 (471)
Q Consensus 321 ~~~~v~~~~~s~d~~~l~-t~~~d---g~i~iwd~~~~~~--~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg---~i~iw 391 (471)
+....... |+++|..|+ .+..+ +.|.++|+.++.. ...+..|...+. .|++++++|+....++ .|++|
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEE
Confidence 66666555 666666554 44333 6799999988754 345555666655 8899998887766544 68999
Q ss_pred ECCCcc
Q psy11350 392 DLRKRR 397 (471)
Q Consensus 392 d~~~~~ 397 (471)
|+..+.
T Consensus 356 d~~g~~ 361 (693)
T 3iuj_A 356 DYEGKR 361 (693)
T ss_dssp CTTSCE
T ss_pred ECCCCe
Confidence 987543
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.07 E-value=6.7e-08 Score=91.83 Aligned_cols=192 Identities=11% Similarity=0.100 Sum_probs=128.5
Q ss_pred cCCCEEEE-EeCCCcEEEEeCCCC----ceEEEee-------cCCCCEEEEEEeeCCCCCCccEEEEEeCC------CcE
Q psy11350 162 PDSQHVAT-ASWSGLCKLWTVPEC----ELVQTFR-------GHDCNVGAIEFHPLPSEGAVCSLASCAQD------GSV 223 (471)
Q Consensus 162 ~~~~~l~t-g~~dg~i~iwd~~~~----~~~~~~~-------~h~~~v~~l~~~~~~~~~~~~~l~s~~~d------g~i 223 (471)
+++++|+. |..++.|+|+|+.+. +...++. .....-..+.+.|++ +++++..+ |.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG------i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA------IYISALGNEEGEGPGGI 166 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC------EEEEEEEETTSCSCCEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe------EEEEcCCCcCCCCCCeE
Confidence 78888765 556789999998754 5666662 111234567788887 34555444 789
Q ss_pred EEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEe----
Q psy11350 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC---- 299 (471)
Q Consensus 224 ~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~---- 299 (471)
.++|..+.+.+..+...... ..--..+.|+|+++.++++.
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~------------------------------------~~~~Yd~~~~p~~~~mvsS~wg~p 210 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGD------------------------------------QYLAYDFWWNLPNEVLVSSEWAVP 210 (462)
T ss_dssp EEECTTTCCEEEECCSBCTT------------------------------------CCCCCCEEEETTTTEEEECBCCCH
T ss_pred EEEECCCCeEEEEEccCCCC------------------------------------ccccceEEECCCCCEEEEccCcCc
Confidence 99999999888877643210 11123466677777666664
Q ss_pred ---------------cCCeEEEEECCCCcEEEEeeCC-C-CCeEEEEE--eCCCCEEEEEe------CCCeEEEEeCCCC
Q psy11350 300 ---------------WDHSWRLWDLNQGQEVLHQEGH-G-KPVYCMSF--QGDGSVVATGG------LDAFGRVWDLRTG 354 (471)
Q Consensus 300 ---------------~dg~i~iwd~~~~~~~~~~~~~-~-~~v~~~~~--s~d~~~l~t~~------~dg~i~iwd~~~~ 354 (471)
.+.+|.+||+.+++.+.++... . .....+.| +|+++++++++ .+++|.+|....+
T Consensus 211 ~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 211 NTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp HHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred cccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Confidence 3688999999998877776542 1 23345555 99999888776 5668887765544
Q ss_pred ee--EEEe--ccc----------------CcCEEEEEEcCCCCEEEEEeC-CCcEEEEECCC
Q psy11350 355 RC--IMFL--EGH----------------LKSVFSVDFSPDGYHLATGSE-DNAVKIWDLRK 395 (471)
Q Consensus 355 ~~--~~~~--~~h----------------~~~v~~~~~sp~~~~l~s~s~-dg~i~iwd~~~ 395 (471)
+. ...+ ... ...+..|.+||||++|+++.. .+.|.+||+..
T Consensus 291 ~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 291 KWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp EEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred ceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 21 1111 110 235788999999999887764 68899999863
No 229
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.04 E-value=5.5e-08 Score=85.77 Aligned_cols=182 Identities=9% Similarity=0.039 Sum_probs=129.1
Q ss_pred eEEEEEecCCCEEEEEeCCC--cEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc
Q psy11350 155 ISYCSFSPDSQHVATASWSG--LCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT 232 (471)
Q Consensus 155 V~~~~~s~~~~~l~tg~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 232 (471)
...+.|+ ++.++.+.+.+| .|+++|+.+++.+..+.... ........+.+.. +.+..-.++.+.+||..+.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~----ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDK----IVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTE----EEEEESSSSEEEEEETTTCC
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCE----EEEEEeeCCEEEEEECccCc
Confidence 3678898 666666666665 89999999999998887543 3333333334442 44555568999999999998
Q ss_pred ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCC
Q psy11350 233 PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG 312 (471)
Q Consensus 233 ~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~ 312 (471)
.+.++..... . ..++ +++..|+.+..++.|.++|..+.
T Consensus 119 ~~~ti~~~~e-------------------------------------G---~glt--~dg~~L~~SdGs~~i~~iDp~T~ 156 (262)
T 3nol_A 119 QVRSFNYDGE-------------------------------------G---WGLT--HNDQYLIMSDGTPVLRFLDPESL 156 (262)
T ss_dssp EEEEEECSSC-------------------------------------C---CCEE--ECSSCEEECCSSSEEEEECTTTC
T ss_pred EEEEEECCCC-------------------------------------c---eEEe--cCCCEEEEECCCCeEEEEcCCCC
Confidence 8887764221 1 1233 46777777777888999999999
Q ss_pred cEEEEeeCC--C---CCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEeccc------------CcCEEEEEEcCC
Q psy11350 313 QEVLHQEGH--G---KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH------------LKSVFSVDFSPD 375 (471)
Q Consensus 313 ~~~~~~~~~--~---~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h------------~~~v~~~~~sp~ 375 (471)
+.+..+.-. . ..++.+.|. +|.+.+..-.++.|.+.|..+++.+..+... ....+.|+|+|+
T Consensus 157 ~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 157 TPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp SEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred eEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC
Confidence 888776532 2 334567776 7766655557889999999999988877532 135689999998
Q ss_pred CCEEEEEeCC
Q psy11350 376 GYHLATGSED 385 (471)
Q Consensus 376 ~~~l~s~s~d 385 (471)
++.|+..+..
T Consensus 236 ~~~lfVTGK~ 245 (262)
T 3nol_A 236 HHRLFVTGKL 245 (262)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEECCC
Confidence 8877776654
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.04 E-value=6.1e-08 Score=92.13 Aligned_cols=185 Identities=12% Similarity=0.020 Sum_probs=115.0
Q ss_pred eEEEEECCCCCEEEEEecC------CeEEEEECCCCcEEEEeeCCC---CCeEEEEEeCCCCEEEEEe------------
Q psy11350 283 VSRIKFHPSGRFLGTCCWD------HSWRLWDLNQGQEVLHQEGHG---KPVYCMSFQGDGSVVATGG------------ 341 (471)
Q Consensus 283 v~~l~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~---~~v~~~~~s~d~~~l~t~~------------ 341 (471)
...+.+.|+| .++++..+ |.|.++|..+.+.+..+.... .--+.+.|+|+++.+++..
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~ 218 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLK 218 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCC
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccc
Confidence 4556777888 55555444 789999999999988876332 2244688899999988884
Q ss_pred -------CCCeEEEEeCCCCeeEEEeccc--CcCEEEEEE--cCCCCEEEEEe------CCCcEEEEECCCccc--hhee
Q psy11350 342 -------LDAFGRVWDLRTGRCIMFLEGH--LKSVFSVDF--SPDGYHLATGS------EDNAVKIWDLRKRRL--LKWC 402 (471)
Q Consensus 342 -------~dg~i~iwd~~~~~~~~~~~~h--~~~v~~~~~--sp~~~~l~s~s------~dg~i~iwd~~~~~~--~~~~ 402 (471)
.+.+|.+||+.+++.+.++... ......+.| +|++++++.++ .+++|.+|..+.++. ++.+
T Consensus 219 ~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vI 298 (462)
T 2ece_A 219 LEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVI 298 (462)
T ss_dssp TTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEE
T ss_pred hhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEE
Confidence 3689999999999888877642 134556666 99999888776 466887766544321 1111
Q ss_pred --cc---------cC------CCccceeeccccceeeeecccCCCcccccch---hhhcccccceee-------------
Q psy11350 403 --TQ---------LL------PNSIGVTSLLTDLYIDVLESLNPGIGNIISS---ALKEQVEPIPLL------------- 449 (471)
Q Consensus 403 --~~---------~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~------------- 449 (471)
.. .. +....-+.++.|.+..+...+..+...++.- .....+..+++.
T Consensus 299 di~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~ 378 (462)
T 2ece_A 299 EIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHK 378 (462)
T ss_dssp EECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCC
T ss_pred eCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccccccc
Confidence 00 00 1223444456666555544444433332221 111222333332
Q ss_pred --ecccceeeeecCCeEEEee
Q psy11350 450 --LDIQKLTFKFDSDLHAMVL 468 (471)
Q Consensus 450 --~~~~~l~fs~dg~~lA~~~ 468 (471)
...+.+++||||++|.+.-
T Consensus 379 ~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 379 LTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCCEEEEcCCCCEEEEEc
Confidence 1258899999999988764
No 231
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.04 E-value=7.6e-09 Score=97.62 Aligned_cols=265 Identities=11% Similarity=-0.065 Sum_probs=164.0
Q ss_pred cEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEe----------CCCcEEEEeCCCCcceeeecCCC---
Q psy11350 175 LCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA----------QDGSVKLWSLDKDTPLANLEGHE--- 241 (471)
Q Consensus 175 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~--- 241 (471)
.|.++|..+++.+.++.....+ .+.++|++.. ++.+. .++.|.+||+.+++.+..+....
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~-----lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSD-----FALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSC-----EEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCE-----EEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 8889999999999999866666 7999999984 55554 47899999999999998876431
Q ss_pred ---CcceEEEEECCCCCEEEEEeCC--CeEEe--ccc--cccccCCCCcceEEEEECCCCC-EEEEEecCCeEEEEECCC
Q psy11350 242 ---PFRVSRIKFHPSGRFLGTCCWD--HSWRL--DTP--LANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQ 311 (471)
Q Consensus 242 ---~~~v~~~~~s~~~~~i~~~~~d--~~~~~--~~~--~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~iwd~~~ 311 (471)
......++++|||++++++... ..+.+ ... ...+... . ++.+.|+++ .+++.+.||.+.+.|+.+
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~--~---~~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSA--S---CFHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECS--S---CCCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECC--C---ceEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 1245689999999999998753 33444 322 1111110 0 112234443 445566788888889886
Q ss_pred -----CcEEEE----eeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCe--eEEEecc-------cC---cCEEEE
Q psy11350 312 -----GQEVLH----QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR--CIMFLEG-------HL---KSVFSV 370 (471)
Q Consensus 312 -----~~~~~~----~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~--~~~~~~~-------h~---~~v~~~ 370 (471)
++.... +.....+. . ++++..++..+. +.|.+.|+.+.. .+..+.. +. .....+
T Consensus 195 ~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v 269 (368)
T 1mda_H 195 APAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMV 269 (368)
T ss_dssp SCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCE
T ss_pred ccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceee
Confidence 332211 11122343 3 666666666666 999999986542 2222211 11 111126
Q ss_pred EEcCCCCEEEEEeC---------CCcEEEEECCCccchheecccCCCccceeeccccceeeeeccc-CCCcccccchhhh
Q psy11350 371 DFSPDGYHLATGSE---------DNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESL-NPGIGNIISSALK 440 (471)
Q Consensus 371 ~~sp~~~~l~s~s~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~~~ 440 (471)
+++|+++.++.+.. ++.+.++|+.+++.+..+.... ...-+.+..|....++... ..+...++.....
T Consensus 270 ~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~--~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 270 AKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH--DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE--EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred EEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC--CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 89999988876533 2356699999999988876443 2334445555544444443 3444555555555
Q ss_pred cccccceeeecccceeee
Q psy11350 441 EQVEPIPLLLDIQKLTFK 458 (471)
Q Consensus 441 ~~~~~~~~~~~~~~l~fs 458 (471)
..+..++.......+++.
T Consensus 348 kvv~~I~vg~~P~~i~~~ 365 (368)
T 1mda_H 348 QDQSSVELDKGPESLSVQ 365 (368)
T ss_dssp EEEEECCCCSCCCEEECC
T ss_pred cEEEEEECCCCCCEEEee
Confidence 555666655555555554
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.04 E-value=6.6e-07 Score=80.82 Aligned_cols=207 Identities=13% Similarity=-0.007 Sum_probs=130.9
Q ss_pred cCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCC
Q psy11350 153 RPISYCSFSPDSQHVATAS-WSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKD 231 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 231 (471)
..+.+++|++++..|+.+. .++.|.++++.+......+.........+++.|.+.. ++++....+.|.+++++..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~----lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRT----IFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTE----EEEEETTTTEEEEEETTSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCe----EEEEECCCCEEEEEEcCCC
Confidence 3567899999877666555 5689999998765544333333356789999987652 4555556778999887533
Q ss_pred cceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEec---CCeEEEEE
Q psy11350 232 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW---DHSWRLWD 308 (471)
Q Consensus 232 ~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~---dg~i~iwd 308 (471)
.. ..+.... ......++++|++..|+.+.. .+.|..++
T Consensus 112 ~~-~~~~~~~--------------------------------------~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 112 QR-RVLFDTG--------------------------------------LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp SC-EEEECSS--------------------------------------CSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred CE-EEEEECC--------------------------------------CCCccEEEEeeCCCEEEEEECCCCCcEEEEEe
Confidence 21 1111000 113577888886666555553 36788888
Q ss_pred CCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEE-eCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCc
Q psy11350 309 LNQGQEVLHQEGHGKPVYCMSFQGDGSVVATG-GLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387 (471)
Q Consensus 309 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~ 387 (471)
+..................++++|++..|+.+ ...+.|.++|+........+.+ ......++.. ++.++++....+.
T Consensus 153 ~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~ 230 (267)
T 1npe_A 153 MDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNS 230 (267)
T ss_dssp TTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTE
T ss_pred cCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCe
Confidence 76432211122233457899999987655544 4567899999875543333332 2345677764 4444455556689
Q ss_pred EEEEECCCccchheecc
Q psy11350 388 VKIWDLRKRRLLKWCTQ 404 (471)
Q Consensus 388 i~iwd~~~~~~~~~~~~ 404 (471)
|.++|..+++.+.++..
T Consensus 231 v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 231 VIAMDLAISKEMDTFHP 247 (267)
T ss_dssp EEEEETTTTEEEEEECC
T ss_pred EEEEeCCCCCceEEEcc
Confidence 99999999998887753
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.03 E-value=8.7e-09 Score=101.31 Aligned_cols=221 Identities=11% Similarity=0.024 Sum_probs=145.4
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEeec---------------------------------C------CCCEEEEEEee---
Q psy11350 167 VATASWSGLCKLWTVPECELVQTFRG---------------------------------H------DCNVGAIEFHP--- 204 (471)
Q Consensus 167 l~tg~~dg~i~iwd~~~~~~~~~~~~---------------------------------h------~~~v~~l~~~~--- 204 (471)
+.+|+..|.++|+-+++++.+..+.. + .+.......+.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 56788899999999988887765421 0 11122344444
Q ss_pred --CCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEE-C-CCCCEEEEEeCC-------Ce--------
Q psy11350 205 --LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKF-H-PSGRFLGTCCWD-------HS-------- 265 (471)
Q Consensus 205 --~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~-s-~~~~~i~~~~~d-------~~-------- 265 (471)
++.. +++....++.|.+.|+.+.++...+..........+++ + |+++++++++.. |.
T Consensus 98 ~~DG~~----lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 98 KYDGRF----LFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEE----EEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CcCCCE----EEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 5552 45555566789999999999888665544446888888 5 999999888632 21
Q ss_pred ---EE---eccc--cccccCCCCcceEEEEECCCCCEEEEEecCC-----------------------------------
Q psy11350 266 ---WR---LDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDH----------------------------------- 302 (471)
Q Consensus 266 ---~~---~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg----------------------------------- 302 (471)
+. ..+. ...+.- ......++++|+|+++++.+.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~V--gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLV--SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred CceEEEEECCCCeEEEEEEe--CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 11 1110 111110 01234578999999999888553
Q ss_pred ---eEEEEECCC--CcE-EEEeeCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCCCe------------eEEEeccc
Q psy11350 303 ---SWRLWDLNQ--GQE-VLHQEGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTGR------------CIMFLEGH 363 (471)
Q Consensus 303 ---~i~iwd~~~--~~~-~~~~~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~~~------------~~~~~~~h 363 (471)
.|.+.|..+ ++. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+ .+..+. -
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-v 329 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-L 329 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-C
T ss_pred EECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-C
Confidence 367777776 433 333332 22345789999999777665 67899999998653 233333 2
Q ss_pred CcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 364 LKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 364 ~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
......++|+|+|...++.--|+.|.+||+.+
T Consensus 330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 35688999999995455667899999999987
No 234
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.02 E-value=5e-08 Score=100.58 Aligned_cols=188 Identities=14% Similarity=0.101 Sum_probs=115.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEeecCCCC----------E-EEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc
Q psy11350 164 SQHVATASWSGLCKLWTVPECELVQTFRGHDCN----------V-GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT 232 (471)
Q Consensus 164 ~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~----------v-~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 232 (471)
+..|++++.++.|+-+|..+|+.+..+..+... + ..+.. .+. .++.++.|+.|..+|..+|+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-----~v~v~~~dg~l~AlDa~TG~ 142 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKG-----KVYVGVLDGRLEAIDAKTGQ 142 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETT-----EEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECC-----EEEEEccCCEEEEEECCCCC
Confidence 567888888999999999999999887643221 0 11222 122 58888999999999999999
Q ss_pred ceeeecCC-CCcceEEEEECC---CCCEEEEEeC------CCe------------EEecccc-ccc--------------
Q psy11350 233 PLANLEGH-EPFRVSRIKFHP---SGRFLGTCCW------DHS------------WRLDTPL-ANL-------------- 275 (471)
Q Consensus 233 ~~~~~~~~-~~~~v~~~~~s~---~~~~i~~~~~------d~~------------~~~~~~~-~~~-------------- 275 (471)
.+..+... .......+..+| ++. +++++. ++. |...... ...
T Consensus 143 ~~W~~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~ 221 (689)
T 1yiq_A 143 RAWSVDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKT 221 (689)
T ss_dssp EEEEEECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTT
T ss_pred EeeeecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccc
Confidence 88776543 110001111111 232 222221 222 3222100 000
Q ss_pred -cC-------CCCcceEEEEECCCCCEEEEEecCCe-------------------EEEEECCCCcEEEEeeC--CC----
Q psy11350 276 -EG-------HEPFRVSRIKFHPSGRFLGTCCWDHS-------------------WRLWDLNQGQEVLHQEG--HG---- 322 (471)
Q Consensus 276 -~~-------~~~~~v~~l~~~~~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~~--~~---- 322 (471)
.+ ........++++|+...+++++.++. |..||..+++.+..+.. |.
T Consensus 222 ~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~ 301 (689)
T 1yiq_A 222 WFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDY 301 (689)
T ss_dssp CCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCC
T ss_pred cCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccc
Confidence 00 00011135788898899999887764 99999999999877654 22
Q ss_pred ---CCeEEEEEeCCCC---EEEEEeCCCeEEEEeCCCCeeEEE
Q psy11350 323 ---KPVYCMSFQGDGS---VVATGGLDAFGRVWDLRTGRCIMF 359 (471)
Q Consensus 323 ---~~v~~~~~s~d~~---~l~t~~~dg~i~iwd~~~~~~~~~ 359 (471)
.++.......+|+ .++.++.+|.++++|..+|+.+..
T Consensus 302 ~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 302 TATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp CCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred cCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecc
Confidence 1222223333665 788999999999999999998743
No 235
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.00 E-value=7.3e-07 Score=84.90 Aligned_cols=226 Identities=12% Similarity=-0.052 Sum_probs=140.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceEEEeecC---------CCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcc
Q psy11350 163 DSQHVATASWSGLCKLWTVPECELVQTFRGH---------DCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP 233 (471)
Q Consensus 163 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h---------~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 233 (471)
++..|++++.++.|..+|..+|+.+..+... ...+.+.-...+ . .++.++.++.|..+|..+++.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~v~v~~~~g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSG-G-----HVYIGSEKAQVYALNTSDGTV 125 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEET-T-----EEEEEETTSEEEEEETTTCCE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeC-C-----EEEEEcCCCEEEEEECCCCCE
Confidence 3577888888999999999999988776642 223322222223 3 588888999999999999998
Q ss_pred eeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecc---ccccccCCCCcce------EEEEECCCCCEEEEEecCCeE
Q psy11350 234 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT---PLANLEGHEPFRV------SRIKFHPSGRFLGTCCWDHSW 304 (471)
Q Consensus 234 ~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~---~~~~~~~~~~~~v------~~l~~~~~~~~l~~~~~dg~i 304 (471)
+..+...... ...... .+..+++++.++.+.... ............+ ..... .+..+++++.++.|
T Consensus 126 ~W~~~~~~~~-~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l 200 (376)
T 3q7m_A 126 AWQTKVAGEA-LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRV 200 (376)
T ss_dssp EEEEECSSCC-CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEE
T ss_pred EEEEeCCCce-EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEE
Confidence 8766544321 111111 134566666666432211 1111100000001 11111 24578888889999
Q ss_pred EEEECCCCcEEEEeeCCCCC-------eEEEEEeC--CCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCC
Q psy11350 305 RLWDLNQGQEVLHQEGHGKP-------VYCMSFQG--DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD 375 (471)
Q Consensus 305 ~iwd~~~~~~~~~~~~~~~~-------v~~~~~s~--d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 375 (471)
..+|..+++.+......... +..+...| .+..++.++.++.+..+|..+++.+..... .....+.. +
T Consensus 201 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~ 276 (376)
T 3q7m_A 201 SAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--D 276 (376)
T ss_dssp EEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--E
T ss_pred EEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--E
Confidence 99999999887766432110 00011111 345778888899999999999988766542 33444444 3
Q ss_pred CCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 376 GYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 376 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
+..++.++.++.|..+|..+++.+....
T Consensus 277 ~~~l~~~~~~g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 277 GNRIYLVDQNDRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp TTEEEEEETTCCEEEEETTTCCEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEeec
Confidence 6678888899999999999998765443
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.99 E-value=4e-07 Score=82.31 Aligned_cols=249 Identities=8% Similarity=-0.055 Sum_probs=140.0
Q ss_pred CEEEEEeCCCcEEEEeCCCCce-----EEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecC
Q psy11350 165 QHVATASWSGLCKLWTVPECEL-----VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEG 239 (471)
Q Consensus 165 ~~l~tg~~dg~i~iwd~~~~~~-----~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 239 (471)
.+|+.+. .+.|+.+++..... ...+......+.+++|++.+.. ++++....+.|..+++..+.....+..
T Consensus 2 ~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~----ly~~d~~~~~I~~~~~~g~~~~~~~~~ 76 (267)
T 1npe_A 2 THLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKV----VYWTDISEPSIGRASLHGGEPTTIIRQ 76 (267)
T ss_dssp EEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTE----EEEEETTTTEEEEEESSSCCCEEEECT
T ss_pred cEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCE----EEEEECCCCEEEEEecCCCCcEEEEEC
Confidence 4555555 35788888765432 1122222245679999987653 455555678899999865432211111
Q ss_pred CCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEe-cCCeEEEEECCCCcEEEEe
Q psy11350 240 HEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHSWRLWDLNQGQEVLHQ 318 (471)
Q Consensus 240 ~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~ 318 (471)
. ......++++|++..|+.+. ..+.|.++++.........
T Consensus 77 ~---------------------------------------~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~ 117 (267)
T 1npe_A 77 D---------------------------------------LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF 117 (267)
T ss_dssp T---------------------------------------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred C---------------------------------------CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEE
Confidence 0 12467888888766555544 4678999998654322222
Q ss_pred eCCCCCeEEEEEeCCCCEEEEEeC---CCeEEEEeCCCCeeEEEe-cccCcCEEEEEEcCCCCEEE-EEeCCCcEEEEEC
Q psy11350 319 EGHGKPVYCMSFQGDGSVVATGGL---DAFGRVWDLRTGRCIMFL-EGHLKSVFSVDFSPDGYHLA-TGSEDNAVKIWDL 393 (471)
Q Consensus 319 ~~~~~~v~~~~~s~d~~~l~t~~~---dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~sp~~~~l~-s~s~dg~i~iwd~ 393 (471)
.........++++|++..|+.+.. .+.|..+++.... ...+ .........++++|++..|+ +-...+.|.++|+
T Consensus 118 ~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 118 DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 222245689999997665555543 3688888875432 2222 22335689999999876665 4455688999999
Q ss_pred CCccchheecccCCCccceeeccccceeeeecccCCCcccccchhhhcccccceee--ecccceeeeecCC
Q psy11350 394 RKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPIPLL--LDIQKLTFKFDSD 462 (471)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~fs~dg~ 462 (471)
........+. ....+..+ ++ +....++..+..+....+.......+..++.. +....+++.|++.
T Consensus 197 ~g~~~~~~~~-~~~~P~gi-~~--d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 197 AQPGRRKVLE-GLQYPFAV-TS--YGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEEEEE-CCCSEEEE-EE--ETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCceEEEec-CCCCceEE-EE--eCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 8654433322 11222222 22 22333333333333333433333334444432 2457888888874
No 237
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.96 E-value=1.5e-07 Score=82.91 Aligned_cols=180 Identities=9% Similarity=-0.049 Sum_probs=127.2
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcce
Q psy11350 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPL 234 (471)
Q Consensus 155 V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 234 (471)
...+.|+ ++.+..+.+.+|.|+++|+.+++.+..+ .. .........+.+.. +.+..-.++.+.+||..+.+.+
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~----Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGER----LYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSC----EEEEESSSCEEEEEETTTTEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCE----EEEEEccCCEEEEEECCcCcEE
Confidence 4678887 3556667778889999999999988887 32 33333223334443 5556667899999999999888
Q ss_pred eeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcE
Q psy11350 235 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE 314 (471)
Q Consensus 235 ~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 314 (471)
.++..... -..++ ++++.|+.+..++.|.++|..+.+.
T Consensus 130 ~ti~~~~e----------------------------------------GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v 167 (268)
T 3nok_A 130 RTTRYSGE----------------------------------------GWGLC--YWNGKLVRSDGGTMLTFHEPDGFAL 167 (268)
T ss_dssp EEEECSSC----------------------------------------CCCEE--EETTEEEEECSSSEEEEECTTTCCE
T ss_pred EEEeCCCc----------------------------------------eeEEe--cCCCEEEEECCCCEEEEEcCCCCeE
Confidence 87764221 12233 4678888887799999999999988
Q ss_pred EEEeeC--CC---CCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEeccc-------------CcCEEEEEEcCCC
Q psy11350 315 VLHQEG--HG---KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH-------------LKSVFSVDFSPDG 376 (471)
Q Consensus 315 ~~~~~~--~~---~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~~~~sp~~ 376 (471)
+..+.- +. ..++.+.|. +|.+.+..-.++.|.+.|..+++.+..+... ....+.|||+|++
T Consensus 168 ~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~ 246 (268)
T 3nok_A 168 VGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS 246 (268)
T ss_dssp EEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT
T ss_pred EEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCC
Confidence 877653 22 245677877 7766655556889999999999988876532 1357899999976
Q ss_pred CEEEEEeC
Q psy11350 377 YHLATGSE 384 (471)
Q Consensus 377 ~~l~s~s~ 384 (471)
+.|+..+.
T Consensus 247 ~rlfVTGK 254 (268)
T 3nok_A 247 GRIFMTGK 254 (268)
T ss_dssp CCEEEEET
T ss_pred CEEEEeCC
Confidence 65555443
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.95 E-value=7.6e-08 Score=98.99 Aligned_cols=234 Identities=11% Similarity=0.056 Sum_probs=148.6
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEeecCCCC-----------EEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc
Q psy11350 164 SQHVATASWSGLCKLWTVPECELVQTFRGHDCN-----------VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT 232 (471)
Q Consensus 164 ~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~-----------v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 232 (471)
+..|++++.++.|+-+|..+|+.+..+...... ...+++ .+. .++.++.|+.|..+|..+|+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~-----~v~v~~~dg~l~alD~~tG~ 149 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKG-----KVYVGAWDGRLIALDAATGK 149 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETT-----EEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECC-----EEEEEcCCCEEEEEECCCCC
Confidence 567777887899999999999999887643210 012222 223 58888999999999999999
Q ss_pred ceeeecCC-CC---cceEE-EEECCCCCEEEEEeC------CCe------------EEeccccccc--------------
Q psy11350 233 PLANLEGH-EP---FRVSR-IKFHPSGRFLGTCCW------DHS------------WRLDTPLANL-------------- 275 (471)
Q Consensus 233 ~~~~~~~~-~~---~~v~~-~~~s~~~~~i~~~~~------d~~------------~~~~~~~~~~-------------- 275 (471)
.+..+... .. ..+.+ ..+ .+..+++++. ++. |.........
T Consensus 150 ~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~ 227 (677)
T 1kb0_A 150 EVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAAR 227 (677)
T ss_dssp EEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHT
T ss_pred EEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccc
Confidence 88877654 10 01111 001 1233333332 232 2221110000
Q ss_pred --c--C------CCCcceEEEEECCCCCEEEEEecCC-------------------eEEEEECCCCcEEEEeeC--CC--
Q psy11350 276 --E--G------HEPFRVSRIKFHPSGRFLGTCCWDH-------------------SWRLWDLNQGQEVLHQEG--HG-- 322 (471)
Q Consensus 276 --~--~------~~~~~v~~l~~~~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~--~~-- 322 (471)
. + ........++++|++..+++++.++ .|..+|..+++.+..+.. |.
T Consensus 228 ~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~w 307 (677)
T 1kb0_A 228 TWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNW 307 (677)
T ss_dssp TSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS
T ss_pred cccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccc
Confidence 0 0 0011123578899999888887664 599999999998877653 21
Q ss_pred -----CCeEEEEEeCCC---CEEEEEeCCCeEEEEeCCCCeeEEEecccC-----------cCE----------------
Q psy11350 323 -----KPVYCMSFQGDG---SVVATGGLDAFGRVWDLRTGRCIMFLEGHL-----------KSV---------------- 367 (471)
Q Consensus 323 -----~~v~~~~~s~d~---~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~-----------~~v---------------- 367 (471)
....-+....+| ..++.++.+|.++++|..+|+.+..+.... .++
T Consensus 308 d~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P 387 (677)
T 1kb0_A 308 DYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVP 387 (677)
T ss_dssp CCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSS
T ss_pred ccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECc
Confidence 112223444477 689999999999999999999887654211 011
Q ss_pred --------EEEEEcCCCCEEEEEeCC-------------------------------------------CcEEEEECCCc
Q psy11350 368 --------FSVDFSPDGYHLATGSED-------------------------------------------NAVKIWDLRKR 396 (471)
Q Consensus 368 --------~~~~~sp~~~~l~s~s~d-------------------------------------------g~i~iwd~~~~ 396 (471)
..++++|++.++++...+ |.|..||+.++
T Consensus 388 ~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG 467 (677)
T 1kb0_A 388 GPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ 467 (677)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT
T ss_pred CcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC
Confidence 156889988888776432 78999999999
Q ss_pred cchheecccC
Q psy11350 397 RLLKWCTQLL 406 (471)
Q Consensus 397 ~~~~~~~~~~ 406 (471)
+.+..+....
T Consensus 468 ~~~W~~~~~~ 477 (677)
T 1kb0_A 468 KAAWSVEHVS 477 (677)
T ss_dssp EEEEEEEESS
T ss_pred cEEeecCCCC
Confidence 9887765443
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.94 E-value=3.1e-08 Score=97.41 Aligned_cols=228 Identities=11% Similarity=0.049 Sum_probs=155.4
Q ss_pred cCCCEEEEEeC-CCcEEEEeCCCCceEEEeecC-CCCEEEEEE-e-eCCCCCCccEEEEEe------------------C
Q psy11350 162 PDSQHVATASW-SGLCKLWTVPECELVQTFRGH-DCNVGAIEF-H-PLPSEGAVCSLASCA------------------Q 219 (471)
Q Consensus 162 ~~~~~l~tg~~-dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~-~-~~~~~~~~~~l~s~~------------------~ 219 (471)
+||++|++... ++.|.+.|+.+.++...+.-. ......+++ . |++. +++.++ .
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~-----~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSN-----YVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCS-----EEEEEECSCEESSCSSSSTTCGGGE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCc-----EEEEecccccccCCCCccccccccc
Confidence 48999887765 457999999999988855422 245778888 4 8887 566663 3
Q ss_pred CCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCe---------------EEe----------------
Q psy11350 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---------------WRL---------------- 268 (471)
Q Consensus 220 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~---------------~~~---------------- 268 (471)
++.+.+.|..+.+...++.... ....++++|+|+++++.+.+.. +.+
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred CceEEEEECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 4679999999988877766432 3466889999999999986641 111
Q ss_pred -ccccccccCC------------CCcceEEEEECCCCCEEEEEe-cCCeEEEEECCCCc------------EEEEeeCCC
Q psy11350 269 -DTPLANLEGH------------EPFRVSRIKFHPSGRFLGTCC-WDHSWRLWDLNQGQ------------EVLHQEGHG 322 (471)
Q Consensus 269 -~~~~~~~~~~------------~~~~v~~l~~~~~~~~l~~~~-~dg~i~iwd~~~~~------------~~~~~~~~~ 322 (471)
...+..+... ......++.++|||+++++++ .+.+|.++|+.+.+ .+.... -.
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG 330 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LG 330 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CC
T ss_pred EECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CC
Confidence 0001111111 011345799999999877765 57889999998653 233333 34
Q ss_pred CCeEEEEEeCCCCEEEEEeCCCeEEEEeCCC----------CeeEEEecccCcCE-----EEEEEcCCCCEEEEEeC---
Q psy11350 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRT----------GRCIMFLEGHLKSV-----FSVDFSPDGYHLATGSE--- 384 (471)
Q Consensus 323 ~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~----------~~~~~~~~~h~~~v-----~~~~~sp~~~~l~s~s~--- 384 (471)
.....++|+|+|...++...|+.|.+||+.+ .+.+.++..|-.+- .++.++|||++|+++..
T Consensus 331 ~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~sk 410 (595)
T 1fwx_A 331 LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSK 410 (595)
T ss_dssp SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCT
T ss_pred CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCc
Confidence 5567899999995555667899999999977 55677776664432 12345799999998753
Q ss_pred CCc----------EEEEECCCcc
Q psy11350 385 DNA----------VKIWDLRKRR 397 (471)
Q Consensus 385 dg~----------i~iwd~~~~~ 397 (471)
|.. -.++|+..++
T Consensus 411 dr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 411 DRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp TSSCCCCSSCCEEEEEEECSSSS
T ss_pred cccccCCCCCCCcceEEEcCCCc
Confidence 332 2889996554
No 240
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.92 E-value=4.8e-07 Score=79.10 Aligned_cols=184 Identities=10% Similarity=-0.000 Sum_probs=127.9
Q ss_pred cCeEEEEEecCCCEEEEEeCC--CcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC
Q psy11350 153 RPISYCSFSPDSQHVATASWS--GLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK 230 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~d--g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 230 (471)
.-...+.|++ +.++.+.+.. ..|+++|+.+++.+..+..... .......+.+.. +....-.++.+.+||..+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~----ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDR----LIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTE----EEEEESSSSEEEEEETTT
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCE----EEEEEeeCCEEEEEECCc
Confidence 3456889986 5555565654 4899999999999988865432 222323333432 455566789999999999
Q ss_pred CcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECC
Q psy11350 231 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN 310 (471)
Q Consensus 231 ~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~ 310 (471)
.+.+.++..... -..++ +++..|+++..++.|.++|..
T Consensus 95 l~~~~ti~~~~~----------------------------------------Gwglt--~dg~~L~vSdgs~~l~~iDp~ 132 (243)
T 3mbr_X 95 LTPRARFRYPGE----------------------------------------GWALT--SDDSHLYMSDGTAVIRKLDPD 132 (243)
T ss_dssp TEEEEEEECSSC----------------------------------------CCEEE--ECSSCEEEECSSSEEEEECTT
T ss_pred CcEEEEEeCCCC----------------------------------------ceEEe--eCCCEEEEECCCCeEEEEeCC
Confidence 988887764321 12333 456777777778999999999
Q ss_pred CCcEEEEeeCC--C---CCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEeccc-------------CcCEEEEEE
Q psy11350 311 QGQEVLHQEGH--G---KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH-------------LKSVFSVDF 372 (471)
Q Consensus 311 ~~~~~~~~~~~--~---~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~~~~ 372 (471)
+.+.+..+.-. . ..++.+.+. +|.+.+..-.+..|.+.|..+++.+..+... ....+.|+|
T Consensus 133 t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~ 211 (243)
T 3mbr_X 133 TLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAF 211 (243)
T ss_dssp TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEE
T ss_pred CCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEE
Confidence 99888776532 1 345667766 6766655556889999999999988876521 135789999
Q ss_pred cCCCCEEEEEeCC
Q psy11350 373 SPDGYHLATGSED 385 (471)
Q Consensus 373 sp~~~~l~s~s~d 385 (471)
+|+++.|+..+.-
T Consensus 212 d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 212 DAEHDRLFVTGKR 224 (243)
T ss_dssp ETTTTEEEEEETT
T ss_pred cCCCCEEEEECCC
Confidence 9987776666543
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.92 E-value=2.2e-07 Score=81.95 Aligned_cols=168 Identities=11% Similarity=0.075 Sum_probs=116.2
Q ss_pred ceEEEeecCCCC--EEEEEEeeCCCCCCccEEEEEeCCC--cEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEE
Q psy11350 185 ELVQTFRGHDCN--VGAIEFHPLPSEGAVCSLASCAQDG--SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTC 260 (471)
Q Consensus 185 ~~~~~~~~h~~~--v~~l~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~ 260 (471)
+.+.++ .|... ...+.|+ ++. ++.+++.+| .|+++|+.+++.+..+.....
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~-~~~-----LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~------------------ 86 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYR-NGY-----FYESTGLNGRSSIRKVDIESGKTLQQIELGKR------------------ 86 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEE-TTE-----EEEEEEETTEEEEEEECTTTCCEEEEEECCTT------------------
T ss_pred EEEEEe-cCCCCcccceEEEE-CCE-----EEEECCCCCCceEEEEECCCCcEEEEEecCCc------------------
Confidence 455666 44433 4788888 444 667777766 899999999988776653321
Q ss_pred eCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEe-cCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEE
Q psy11350 261 CWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVAT 339 (471)
Q Consensus 261 ~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t 339 (471)
. ---.+++ ++..|+... .++.+.+||..+.+.+.++.-.... ..+++|+..|+.
T Consensus 87 -------------------~-FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG---~glt~dg~~L~~ 141 (262)
T 3nol_A 87 -------------------Y-FGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG---WGLTHNDQYLIM 141 (262)
T ss_dssp -------------------C-CEEEEEE--ETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC---CCEEECSSCEEE
T ss_pred -------------------c-ceeEEEE--eCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc---eEEecCCCEEEE
Confidence 0 0122333 344555444 5789999999999999888643322 233457777777
Q ss_pred EeCCCeEEEEeCCCCeeEEEecccC-----cCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 340 GGLDAFGRVWDLRTGRCIMFLEGHL-----KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 340 ~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
+..++.|.++|..+.+.+.++.... ..++.+.|. +|+..+..-.++.|.+.|..+++.+.++.
T Consensus 142 SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 142 SDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIID 209 (262)
T ss_dssp CCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEE
T ss_pred ECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEE
Confidence 7678889999999998887765421 345567886 77766666578899999999999988775
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.90 E-value=9.8e-07 Score=84.03 Aligned_cols=226 Identities=10% Similarity=-0.036 Sum_probs=141.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCC
Q psy11350 163 DSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP 242 (471)
Q Consensus 163 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 242 (471)
++..|++++.++.|..+|..+|+.+..+............. ++ .++.++.++.|..+|..+++.+..+.....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~-~~------~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~ 174 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS-DG------LVLIHTSNGQLQALNEADGAVKWTVNLDMP 174 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-TT------EEEEECTTSEEEEEETTTCCEEEEEECCC-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE-CC------EEEEEcCCCeEEEEECCCCcEEEEEeCCCC
Confidence 45678888889999999999999887776443221112222 22 578888999999999999988877654332
Q ss_pred cc----eEEEEECCCCCEEEEEeCCCeEEecc---cccc--ccCCCC------cceEEEEECC--CCCEEEEEecCCeEE
Q psy11350 243 FR----VSRIKFHPSGRFLGTCCWDHSWRLDT---PLAN--LEGHEP------FRVSRIKFHP--SGRFLGTCCWDHSWR 305 (471)
Q Consensus 243 ~~----v~~~~~s~~~~~i~~~~~d~~~~~~~---~~~~--~~~~~~------~~v~~l~~~~--~~~~l~~~~~dg~i~ 305 (471)
.. ....... +..+++++.++.+.... .... .....+ ..+..+...| .+..+++++.++.+.
T Consensus 175 ~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~ 252 (376)
T 3q7m_A 175 SLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLT 252 (376)
T ss_dssp ----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEE
T ss_pred ceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEE
Confidence 10 0111111 34566666665432211 1110 000000 0000011111 346788888899999
Q ss_pred EEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecc-cCcCEEEEEEcCCCCEEEEEeC
Q psy11350 306 LWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG-HLKSVFSVDFSPDGYHLATGSE 384 (471)
Q Consensus 306 iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~ 384 (471)
.+|..+++.+..... .....+.. ++..+++++.++.|..+|..+++.+..... ....+..... .+..|+.++.
T Consensus 253 ~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~ 326 (376)
T 3q7m_A 253 ALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDS 326 (376)
T ss_dssp EEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECT
T ss_pred EEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeC
Confidence 999999988766542 23444444 456788888899999999999988776652 2222233333 2567888899
Q ss_pred CCcEEEEECCCccchheec
Q psy11350 385 DNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 385 dg~i~iwd~~~~~~~~~~~ 403 (471)
+|.|.++|..+++.+....
T Consensus 327 ~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 327 EGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp TSEEEEEETTTCCEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEe
Confidence 9999999999999876544
No 243
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.90 E-value=1e-07 Score=88.82 Aligned_cols=217 Identities=10% Similarity=0.018 Sum_probs=146.3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCc
Q psy11350 164 SQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPF 243 (471)
Q Consensus 164 ~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 243 (471)
+..|..++.++.|..+|.. ++....+..+...+.++...+++. +..++.++.|..+|.. ++....+.....
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~------l~vgt~~~~l~~~d~~-g~~~~~~~~~~~- 177 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT------IYVGSNDNYLYAINPD-GTEKWRFKTNDA- 177 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC------EEEECTTSEEEEECTT-SCEEEEEECSSC-
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE------EEEEcCCCEEEEECCC-CCEeEEEecCCC-
Confidence 5668888889999999988 877777665555566666666664 7778888999999988 777666654433
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEeccccc---cccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeC
Q psy11350 244 RVSRIKFHPSGRFLGTCCWDHSWRLDTPLA---NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320 (471)
Q Consensus 244 ~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~---~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 320 (471)
.+.++...+++..++.. .+.+.+..... ..... ...+.++...++|. |.+++.++.|..+|. +++.+..+..
T Consensus 178 ~~~~~~~d~~g~l~v~t--~~l~~~d~~g~~~~~~~~~-~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~ 252 (330)
T 3hxj_A 178 ITSAASIGKDGTIYFGS--DKVYAINPDGTEKWNFYAG-YWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKT 252 (330)
T ss_dssp CCSCCEECTTCCEEEES--SSEEEECTTSCEEEEECCS-SCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred ceeeeEEcCCCEEEEEe--CEEEEECCCCcEEEEEccC-CcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeC
Confidence 56677777788755554 55544431111 11111 23477788887764 566777888999984 5666666554
Q ss_pred CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc
Q psy11350 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 321 ~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~ 397 (471)
....+.++.+.+++. |..++.+|.|..+|. +++.+..+......+.++...++|. |..++.+|.+++...+..+
T Consensus 253 ~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 253 GKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp SSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC----
T ss_pred CCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEeccccc
Confidence 444444566665664 566778889999995 7777766665556677788877776 5568899999988766443
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.88 E-value=6.5e-07 Score=83.37 Aligned_cols=233 Identities=12% Similarity=0.006 Sum_probs=143.9
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeec--------------------CCCCEEEEEEee-CCCCCCc
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRG--------------------HDCNVGAIEFHP-LPSEGAV 211 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~--------------------h~~~v~~l~~~~-~~~~~~~ 211 (471)
....+++|+++|++++++..++.|..|+..+++.. .+.. ....+.++++.+ ++.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~---- 93 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ---- 93 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE----
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc----
Confidence 34567789999998888888999999998765443 2221 013578899997 553
Q ss_pred cEEEEEeCCCcEEEEeCCCCcceeee---cCCCCcceEEEEECC-CCCEEEEEeC-----------------CCe-EEec
Q psy11350 212 CSLASCAQDGSVKLWSLDKDTPLANL---EGHEPFRVSRIKFHP-SGRFLGTCCW-----------------DHS-WRLD 269 (471)
Q Consensus 212 ~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~~v~~~~~s~-~~~~i~~~~~-----------------d~~-~~~~ 269 (471)
|+.+...+.|..+|..++...... ..........+++.+ +|..+++-.. .+. +.+.
T Consensus 94 --l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 94 --LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp --EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred --EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 666655566888887655322111 111112578899999 8987666432 122 2221
Q ss_pred cccc---cccCCCCcceEEEEECCCCCEEEEE-ecCCeEEEEECCCCc--EEEEeeCCCCCeEEEEEeCCCCEEEEEeC-
Q psy11350 270 TPLA---NLEGHEPFRVSRIKFHPSGRFLGTC-CWDHSWRLWDLNQGQ--EVLHQEGHGKPVYCMSFQGDGSVVATGGL- 342 (471)
Q Consensus 270 ~~~~---~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~s~d~~~l~t~~~- 342 (471)
.... .+... ......++|+|+++.|+++ +..+.|.+|++.... ....+....+ ...+++.++|++.++...
T Consensus 172 ~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 172 PSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp TTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEE
T ss_pred CCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCc
Confidence 1101 11100 1135679999999977666 456899999987521 1111111223 678999999987776654
Q ss_pred ---------CCeEEEEeCCCCeeEEEecccC----cCEEEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy11350 343 ---------DAFGRVWDLRTGRCIMFLEGHL----KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396 (471)
Q Consensus 343 ---------dg~i~iwd~~~~~~~~~~~~h~----~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~ 396 (471)
.+.|..+|. .++.+..+.... ..++++++ .+++++++....+.|..+++...
T Consensus 250 ~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp TTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred ccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 467888886 477666665332 34667776 36666666667788999998644
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.88 E-value=2.5e-08 Score=93.07 Aligned_cols=222 Identities=10% Similarity=-0.041 Sum_probs=140.7
Q ss_pred EEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeec
Q psy11350 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLE 238 (471)
Q Consensus 159 ~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 238 (471)
.+..++ .|.+++.++.|..|| .+++....+..+...+.++...+++. +..++.+ |..+|. +++.+..+.
T Consensus 26 ~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~------l~v~t~~--l~~~d~-~g~~~~~~~ 94 (330)
T 3hxj_A 26 ILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT------IYFGSDK--VYAINP-DGTEKWRFD 94 (330)
T ss_dssp EECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE------ECCSSCE--EEEECC-CGGGGGGSC
T ss_pred eEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc------EEEecCc--EEEECC-CCcEEEEEE
Confidence 344455 466777789999999 88888776655444456666665553 5555554 888886 666655544
Q ss_pred CCCCcceEEEEECCCCCEEEEEeCCCeEEeccccc----cccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcE
Q psy11350 239 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA----NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE 314 (471)
Q Consensus 239 ~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~----~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 314 (471)
.... ......+. +..+.+++.++.+....... ..... ...+.++...+++. +++++.++.|..||.. ++.
T Consensus 95 ~~~~-~~~~~~~~--~~~l~v~t~~~~l~~~d~~g~~~~~~~~~-~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~ 168 (330)
T 3hxj_A 95 TKKA-IVSDFTIF--EDILYVTSMDGHLYAINTDGTEKWRFKTK-KAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTE 168 (330)
T ss_dssp C------CCEEEE--TTEEEEECTTSEEEEECTTSCEEEEEECS-SCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCE
T ss_pred CCCC-cccCceEE--CCEEEEEecCCEEEEEcCCCCEEEEEcCC-CceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCE
Confidence 3322 22222333 55566676666533322111 11111 22345566666666 6667788999999998 877
Q ss_pred EEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11350 315 VLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 315 ~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~ 394 (471)
+..+......+.++.+.+++.+++.. +.|..|| .+++.+..+......+.++...++|. |..++.++.|..+|.
T Consensus 169 ~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~- 242 (330)
T 3hxj_A 169 KWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP- 242 (330)
T ss_dssp EEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-
T ss_pred eEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-
Confidence 77766666667778887888755544 7899999 78877777666666788888888876 455667788888874
Q ss_pred Cccchheec
Q psy11350 395 KRRLLKWCT 403 (471)
Q Consensus 395 ~~~~~~~~~ 403 (471)
+++.+..+.
T Consensus 243 ~g~~~~~~~ 251 (330)
T 3hxj_A 243 DGTEKWRFK 251 (330)
T ss_dssp TSCEEEEEE
T ss_pred CCCEeEEee
Confidence 555554443
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.86 E-value=1.7e-07 Score=96.21 Aligned_cols=237 Identities=12% Similarity=0.072 Sum_probs=149.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEeecCC----CCEEEEEEeeCCCCCCccEEEEEeC------CCcEEEEeCCCCcc
Q psy11350 164 SQHVATASWSGLCKLWTVPECELVQTFRGHD----CNVGAIEFHPLPSEGAVCSLASCAQ------DGSVKLWSLDKDTP 233 (471)
Q Consensus 164 ~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~----~~v~~l~~~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~ 233 (471)
+..|++++.|+.|..+|..+|+.+..+.... ..+.+--...++ .++.+.. +|.|..+|..+|+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~------~v~vg~~~~~~~~~g~v~a~D~~tG~~ 190 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKG------KVIIGNGGAEYGVRGFVSAYDADTGKL 190 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETT------EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECC------EEEEeCCCCCcCCCCEEEEEECCCCcE
Confidence 5678888899999999999999998776421 111110001122 3555443 58999999999998
Q ss_pred eeeecCC--CC----------------------------cceEEEEECCCCCEEEEEeCCCe------------------
Q psy11350 234 LANLEGH--EP----------------------------FRVSRIKFHPSGRFLGTCCWDHS------------------ 265 (471)
Q Consensus 234 ~~~~~~~--~~----------------------------~~v~~~~~s~~~~~i~~~~~d~~------------------ 265 (471)
+..+... .. .....+++.|++..+++++.++.
T Consensus 191 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~ 270 (668)
T 1kv9_A 191 AWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLS 270 (668)
T ss_dssp EEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 8776531 10 01124688888888888776652
Q ss_pred -E-Ee--ccccc--ccc--CC------CCcceEEEEECCCCC---EEEEEecCCeEEEEECCCCcEEEEeeCCC------
Q psy11350 266 -W-RL--DTPLA--NLE--GH------EPFRVSRIKFHPSGR---FLGTCCWDHSWRLWDLNQGQEVLHQEGHG------ 322 (471)
Q Consensus 266 -~-~~--~~~~~--~~~--~~------~~~~v~~l~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------ 322 (471)
+ -+ .+... .+. .| ...+.....+..+|+ .++.++.+|.++++|..+|+.+.......
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 350 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK 350 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence 1 11 11100 000 01 011222222223554 68889999999999999999874432111
Q ss_pred ------CCe------------------------EEEEEeCCCCEEEEEe-------------------------------
Q psy11350 323 ------KPV------------------------YCMSFQGDGSVVATGG------------------------------- 341 (471)
Q Consensus 323 ------~~v------------------------~~~~~s~d~~~l~t~~------------------------------- 341 (471)
.++ ..++++|+..++++..
T Consensus 351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 430 (668)
T 1kv9_A 351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD 430 (668)
T ss_dssp ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred cccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCC
Confidence 001 1267888776665421
Q ss_pred -----CCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccCC
Q psy11350 342 -----LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLP 407 (471)
Q Consensus 342 -----~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 407 (471)
.+|.|..||+.+++.+-....+ .+.....+...+.+++.++.||.|+.||.++++.+..+.....
T Consensus 431 ~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~ 500 (668)
T 1kv9_A 431 VPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSG 500 (668)
T ss_dssp CCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CCCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCC
Confidence 2478999999999988776533 3333334445678899999999999999999999987766543
No 247
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.84 E-value=3.5e-05 Score=81.04 Aligned_cols=237 Identities=11% Similarity=0.003 Sum_probs=155.4
Q ss_pred CcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeec-------CCCCEEEEEEeeCCCCCCccEEEEEeCCCcEE
Q psy11350 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRG-------HDCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 224 (471)
...|.++...++|.+. .|+.++-|.+||..+++....... ....|.++...+++. |..|+.+ -|.
T Consensus 214 ~~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~------lWigt~~-Gl~ 285 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIW-VATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNR------LWIGTFN-DLN 285 (795)
T ss_dssp CCCEEEEEEEETTEEE-EEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSC------EEEEESS-CEE
T ss_pred CCeeEEEEEcCCCCEE-EEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCC------EEEEeCC-hhh
Confidence 4578888888877644 455455599999877654433221 135699998888776 5666665 588
Q ss_pred EEeCCCCcceeeecC------CCCcceEEEEECCCCCEEEEEeCCCeEEeccccc---ccc------CCCCcceEEEEEC
Q psy11350 225 LWSLDKDTPLANLEG------HEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA---NLE------GHEPFRVSRIKFH 289 (471)
Q Consensus 225 iwd~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~---~~~------~~~~~~v~~l~~~ 289 (471)
+||..++........ -....|.++...++|..-+.....|...+..... .+. .-....|.++...
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d 365 (795)
T 4a2l_A 286 IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVED 365 (795)
T ss_dssp EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEEC
T ss_pred eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEEC
Confidence 999876654332211 1123799999999988665544455544421111 111 1113358999998
Q ss_pred CCCCEEEEEecCCeEEEEECCCCcEEEEeeC--------CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec
Q psy11350 290 PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG--------HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361 (471)
Q Consensus 290 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~ 361 (471)
++|+ |.+|+.++-|..||..+++....... ....|.++...++|.+|..|+.++-|.+||..+++......
T Consensus 366 ~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~ 444 (795)
T 4a2l_A 366 KDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQ 444 (795)
T ss_dssp TTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECT
T ss_pred CCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeec
Confidence 8876 55688787899999887654332211 24578999999898856677777789999988876443221
Q ss_pred ----ccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccch
Q psy11350 362 ----GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399 (471)
Q Consensus 362 ----~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 399 (471)
.+...|.++...++|.+.+.. . +-|.+||..+++..
T Consensus 445 ~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 445 RNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFT 484 (795)
T ss_dssp TTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEE
T ss_pred CCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEE
Confidence 134579999998888866554 4 45888998876543
No 248
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.84 E-value=7e-07 Score=79.68 Aligned_cols=170 Identities=12% Similarity=0.063 Sum_probs=117.5
Q ss_pred ceEEEeecCCC--CEEEEEEeeCCCCCCccEEEEEeC--CCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEE
Q psy11350 185 ELVQTFRGHDC--NVGAIEFHPLPSEGAVCSLASCAQ--DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTC 260 (471)
Q Consensus 185 ~~~~~~~~h~~--~v~~l~~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~ 260 (471)
+.+.++. |.. ....+.|+|++. ++++.+. ++.|.++|+.+++.+..+.....
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~-----Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~------------------ 65 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDT-----LFESTGLYGRSSVRQVALQTGKVENIHKMDDS------------------ 65 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTE-----EEEEECSTTTCEEEEEETTTCCEEEEEECCTT------------------
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCe-----EEEECCCCCCCEEEEEECCCCCEEEEEecCCC------------------
Confidence 4555653 443 367999998753 4444443 58999999999988776643221
Q ss_pred eCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEE-ecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEE
Q psy11350 261 CWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTC-CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVAT 339 (471)
Q Consensus 261 ~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t 339 (471)
. ....+++. +..|+.+ -.++.+.++|..+.+.+..+...... ...+++||+.+++
T Consensus 66 -------------------~-fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~v 121 (266)
T 2iwa_A 66 -------------------Y-FGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYG 121 (266)
T ss_dssp -------------------C-CEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEE
T ss_pred -------------------c-ceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEE
Confidence 1 12244554 4445444 45789999999999988887532111 2345668877777
Q ss_pred EeCCCeEEEEeCCCCeeEEEecccC-----cCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 340 GGLDAFGRVWDLRTGRCIMFLEGHL-----KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 340 ~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
+..++.|.++|..+.+.+..+.-.. ..++.+.|. +|..++....++.|.+.|..+++.+.++.
T Consensus 122 s~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 122 SDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp ECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred ECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 7778999999999988887766321 247788888 77665665568899999999999988775
No 249
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.80 E-value=2.1e-05 Score=82.80 Aligned_cols=235 Identities=8% Similarity=-0.014 Sum_probs=154.2
Q ss_pred CcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeec-------CCCCEEEEEEeeCCCCCCccEEEEEeCCCcEE
Q psy11350 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRG-------HDCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 224 (471)
...|.++...++|.+. .|+.+ -|.+|+..++........ ....|.++...+++. |-.|+.++-|.
T Consensus 262 ~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~------lWigt~~~Gl~ 333 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLW-IGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG------MWLGTYFGGLN 333 (795)
T ss_dssp CSBEEEEEECTTSCEE-EEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC------EEEEESSSCEE
T ss_pred CCeEEEEEEcCCCCEE-EEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC------EEEEECCCCeE
Confidence 3569999998888754 45545 589999877654433211 235799999988876 77788888899
Q ss_pred EEeCCCCcceeeec-----CCCCcceEEEEECCCCCEEEEEeCCCeEEecccc---cccc--------CCCCcceEEEEE
Q psy11350 225 LWSLDKDTPLANLE-----GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL---ANLE--------GHEPFRVSRIKF 288 (471)
Q Consensus 225 iwd~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~---~~~~--------~~~~~~v~~l~~ 288 (471)
.|+..++....... .-....|.++...++|...+.....|...+.... ..+. .-....|.++..
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 413 (795)
T 4a2l_A 334 YYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYV 413 (795)
T ss_dssp EECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEE
T ss_pred EeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEE
Confidence 99875543222111 1112368999999888765543333554442211 1111 011346899999
Q ss_pred CCCCCEEEEEecCCeEEEEECCCCcEEEEee----CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecc--
Q psy11350 289 HPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE----GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG-- 362 (471)
Q Consensus 289 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-- 362 (471)
.++++.|.+|+.++-|.+||..+++...... .+...|.++...++|.+.+.. . +-+.+||..+++.......
T Consensus 414 d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~ 491 (795)
T 4a2l_A 414 DEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKD 491 (795)
T ss_dssp ETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTT
T ss_pred cCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEcccccc
Confidence 8888867788887889999998876433221 234679999998888866554 4 4588999887754432211
Q ss_pred ----cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccc
Q psy11350 363 ----HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398 (471)
Q Consensus 363 ----h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 398 (471)
+...|.++...++|.+.+... +-|..||..+++.
T Consensus 492 ~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 492 GTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI 529 (795)
T ss_dssp CCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE
T ss_pred ccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE
Confidence 235799999999888666554 5588899877654
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.80 E-value=1.3e-06 Score=87.92 Aligned_cols=254 Identities=11% Similarity=0.010 Sum_probs=151.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEeecCCC----CEEE-EEEeeCCCCCCccEEEEEeC------CCcEEEEeCCCCc
Q psy11350 164 SQHVATASWSGLCKLWTVPECELVQTFRGHDC----NVGA-IEFHPLPSEGAVCSLASCAQ------DGSVKLWSLDKDT 232 (471)
Q Consensus 164 ~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~----~v~~-l~~~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~ 232 (471)
+..|++++.|+.|..+|..+|+.+..+..... .+.+ ... .++ .++.++. ++.|..+|..+|+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g------~v~vg~~~~~~~~~g~v~a~D~~tG~ 187 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKD------TVLMGCSGAELGVRGAVNAFDLKTGE 187 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT------EEEEECBCGGGTCCCEEEEEETTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECC------EEEEEecCCccCCCCEEEEEECCCCc
Confidence 56788888899999999999999887653210 1111 111 122 3555554 7999999999999
Q ss_pred ceeeecCCCCc-------------------------------------ceEEEEECCCCCEEEEEeCCC-----------
Q psy11350 233 PLANLEGHEPF-------------------------------------RVSRIKFHPSGRFLGTCCWDH----------- 264 (471)
Q Consensus 233 ~~~~~~~~~~~-------------------------------------~v~~~~~s~~~~~i~~~~~d~----------- 264 (471)
.+..+...... ....+++.++...++.+..+.
T Consensus 188 ~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 188 LKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSC
T ss_pred EEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCC
Confidence 88766533210 001345666666665554321
Q ss_pred ------eEEe--ccccc--cc--cCC------CCcceEEEEECCCCC---EEEEEecCCeEEEEECCCCcEEEEeeCCC-
Q psy11350 265 ------SWRL--DTPLA--NL--EGH------EPFRVSRIKFHPSGR---FLGTCCWDHSWRLWDLNQGQEVLHQEGHG- 322 (471)
Q Consensus 265 ------~~~~--~~~~~--~~--~~~------~~~~v~~l~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~- 322 (471)
.+-+ .+... .+ ..+ ......-+...++|+ .++.++.+|.++++|..+++.+.......
T Consensus 268 ~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~ 347 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPA 347 (571)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred ceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCC
Confidence 1111 11000 00 000 000111122234663 57778889999999999998876653211
Q ss_pred ------------CCe--------------------------EEEEEeCCCCEEEEEe-----------------------
Q psy11350 323 ------------KPV--------------------------YCMSFQGDGSVVATGG----------------------- 341 (471)
Q Consensus 323 ------------~~v--------------------------~~~~~s~d~~~l~t~~----------------------- 341 (471)
.++ ..++++|+..+|++..
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~ 427 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGA 427 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccc
Confidence 111 2467888877777653
Q ss_pred --------------CCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecccCC
Q psy11350 342 --------------LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLP 407 (471)
Q Consensus 342 --------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 407 (471)
.+|.|..||+.+++.+-++... ..+.+..+...+..++.++.||.|+.||.++++.+..+.....
T Consensus 428 ~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 506 (571)
T 2ad6_A 428 TLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSG 506 (571)
T ss_dssp EEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCC
Confidence 3578999999999987776532 2333323333466788899999999999999999988765543
Q ss_pred Cccceeeccccceeeeec
Q psy11350 408 NSIGVTSLLTDLYIDVLE 425 (471)
Q Consensus 408 ~~~~~~~~~~d~~~~~~~ 425 (471)
.....+....+..+.+..
T Consensus 507 ~~~~p~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 507 GIGSPMTYSFKGKQYIGS 524 (571)
T ss_dssp CCSCCEEEEETTEEEEEE
T ss_pred cEeeeEEEEECCEEEEEE
Confidence 322223333455544433
No 251
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.79 E-value=9.6e-10 Score=104.76 Aligned_cols=145 Identities=19% Similarity=0.110 Sum_probs=81.3
Q ss_pred EEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCC
Q psy11350 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSG 292 (471)
Q Consensus 213 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 292 (471)
.+++++.||.|..||..+|+.+..+.. .. +.+..+..++
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~----------------------------------------~~s~p~~~~g 49 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIKWTLKE-DP----------------------------------------VLQVPTHVEE 49 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC-CC----------------------------------------SCCCC-----
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEecC-CC----------------------------------------ceecceEcCC
Confidence 689999999999999999988776654 11 1122233466
Q ss_pred CEEEEEecCCeEEEEECCCCcEEEEeeCCCCC-eE-EEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEE
Q psy11350 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP-VY-CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV 370 (471)
Q Consensus 293 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-v~-~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~ 370 (471)
..+++++.||.|+.||..+++.+..+..+... +. +..+. ++..|++|+.++.|+.||..+|+.+..+..+. ..
T Consensus 50 ~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~ 124 (369)
T 2hz6_A 50 PAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----AD 124 (369)
T ss_dssp CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC------------------
T ss_pred CEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cc
Confidence 67777889999999999988876655433110 10 00111 34567888899999999999999887776553 24
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 371 DFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 371 ~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
.++|++..+++++.|+.|+.||.++++.+..+.
T Consensus 125 ~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 125 SLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp --------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred cccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 566788899999999999999999999876653
No 252
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.78 E-value=1.2e-05 Score=74.20 Aligned_cols=223 Identities=12% Similarity=0.017 Sum_probs=134.1
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeC-CC-cEEEEeCCC
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ-DG-SVKLWSLDK 230 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~-dg-~i~iwd~~~ 230 (471)
.....++|+++|+++++-..++.|..||... +....+. .......+++.+++. ++++... ++ .|..++..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~-----l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGD-----LVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSC-----EEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCc-----EEEEeccCCcceEEEEcCCC
Confidence 4677899999999777766789999999765 4443333 235688999999887 4444433 22 466677777
Q ss_pred CcceeeecCCCCcceEEEEECCCCCEEEEEeCCCe-EEecccc---cc------c---cC-CCCcceEEEEECCCCCEEE
Q psy11350 231 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-WRLDTPL---AN------L---EG-HEPFRVSRIKFHPSGRFLG 296 (471)
Q Consensus 231 ~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~-~~~~~~~---~~------~---~~-~~~~~v~~l~~~~~~~~l~ 296 (471)
++...............++..+++..+++-...+. +.+.... .. + .. ..-.....+ +|++++|+
T Consensus 105 g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 105 GTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp SCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred CeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence 76433222222223345555555544444433444 3332110 00 0 00 011134555 78887666
Q ss_pred EEe-cCCeEEEEECCC-CcE--EEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEE--EecccCcCEEEE
Q psy11350 297 TCC-WDHSWRLWDLNQ-GQE--VLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM--FLEGHLKSVFSV 370 (471)
Q Consensus 297 ~~~-~dg~i~iwd~~~-~~~--~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~--~~~~h~~~v~~~ 370 (471)
++. ..+.|..|++.. ++. ...+.. ......++++++|+++++....+.|.++|.. ++... .+......++++
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~ 260 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAV 260 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEE
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEE
Confidence 554 567899999874 321 111111 1234568999999988877778899999975 65432 333333568999
Q ss_pred EEc---CCCCEEEEEeCCC
Q psy11350 371 DFS---PDGYHLATGSEDN 386 (471)
Q Consensus 371 ~~s---p~~~~l~s~s~dg 386 (471)
+|. |++..|+.++..+
T Consensus 261 a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 261 AFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EECCSTTTTTEEEEEECTT
T ss_pred EEecccCCCCEEEEECCCC
Confidence 998 8887777666543
No 253
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.76 E-value=3.2e-05 Score=72.63 Aligned_cols=250 Identities=9% Similarity=-0.073 Sum_probs=151.6
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT 232 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 232 (471)
...+|.+..++ .+|+.+. ...|+..++........+.. ...+..++|.+.... ++.+-...+.|..+++....
T Consensus 34 d~~~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~----ly~~D~~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 34 DRRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRREL----VFWSDVTLDRILRANLNGSN 106 (349)
T ss_dssp TSSCEEESSSC-CEEEEEC-BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTE----EEEEETTTTEEEEEETTSCS
T ss_pred CCCcccccccC-ceeEeec-ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccE----EEEEeccCCceEEEecCCCC
Confidence 34456555563 4454444 46688888876555444443 345789999987663 44555567889999987655
Q ss_pred ceeeecCCCCcceEEEEECCCCCEEEEEeC-CCeEEeccc----cccccCCCCcceEEEEECCCCCEEEEEec-C-CeEE
Q psy11350 233 PLANLEGHEPFRVSRIKFHPSGRFLGTCCW-DHSWRLDTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCW-D-HSWR 305 (471)
Q Consensus 233 ~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~-d~~~~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d-g~i~ 305 (471)
....+.... .....+++.+.+..|+.... .+.+..... ...+..........++++|.+..|+.... . +.|.
T Consensus 107 ~~~~~~~~~-~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~ 185 (349)
T 3v64_C 107 VEEVVSTGL-ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 185 (349)
T ss_dssp CEEEECSSC-SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred ceEEEeCCC-CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEE
Confidence 433333222 24678899886665554443 344333111 11121121235789999997666655543 4 7899
Q ss_pred EEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEE-eCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeC
Q psy11350 306 LWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATG-GLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384 (471)
Q Consensus 306 iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 384 (471)
.+++............-...+.++++|++..|+.+ ...+.|..+|+........+........++++. .+.++++-..
T Consensus 186 r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~ 264 (349)
T 3v64_C 186 ASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWH 264 (349)
T ss_dssp EEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETT
T ss_pred EEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCC
Confidence 99987543322222233456899999866655555 456789999987543333333344567888883 5566666667
Q ss_pred CCcEEEEECCCccchheecccCCCccc
Q psy11350 385 DNAVKIWDLRKRRLLKWCTQLLPNSIG 411 (471)
Q Consensus 385 dg~i~iwd~~~~~~~~~~~~~~~~~~~ 411 (471)
.+.|..++..+++.+..+......+..
T Consensus 265 ~~~V~~~~~~~G~~~~~i~~~~~~p~g 291 (349)
T 3v64_C 265 TKSINSANKFTGKNQEIIRNKLHFPMD 291 (349)
T ss_dssp TTEEEEEETTTCCSCEEEECSCSCCCC
T ss_pred CCeEEEEEccCCCccEEeccCCCCCce
Confidence 788999997788777766544333333
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.75 E-value=2.6e-06 Score=74.42 Aligned_cols=168 Identities=17% Similarity=0.128 Sum_probs=115.8
Q ss_pred ceEEEeecCC--CCEEEEEEeeCCCCCCccEEEEEeCCC--cEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEE
Q psy11350 185 ELVQTFRGHD--CNVGAIEFHPLPSEGAVCSLASCAQDG--SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTC 260 (471)
Q Consensus 185 ~~~~~~~~h~--~~v~~l~~~~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~ 260 (471)
+.+.++ .|. .....+.|++ +. ++.+.+.+| .|+.+|+.+++.+..+.....
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~-----LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~------------------ 64 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GH-----LYESTGETGRSSVRKVDLETGRILQRAEVPPP------------------ 64 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TE-----EEEEECCTTSCEEEEEETTTCCEEEEEECCTT------------------
T ss_pred EEEEEc-CCCCccccccEEEEC-CE-----EEEECCCCCCceEEEEECCCCCEEEEEeCCCC------------------
Confidence 455555 454 3466899987 33 566666654 899999999988777654331
Q ss_pred eCCCeEEeccccccccCCCCcceEEEEECCCCCEEE-EEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEE
Q psy11350 261 CWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLG-TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVAT 339 (471)
Q Consensus 261 ~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t 339 (471)
. ---.+++. ++.|+ ..-.++.+.+||..+.+.+.++.....+ ..++ +++..|+.
T Consensus 65 -------------------~-fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~v 119 (243)
T 3mbr_X 65 -------------------Y-FGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYM 119 (243)
T ss_dssp -------------------C-CEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEE
T ss_pred -------------------c-ceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEE
Confidence 0 01223332 34344 4446889999999999999888754332 3444 56776666
Q ss_pred EeCCCeEEEEeCCCCeeEEEecccC-----cCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 340 GGLDAFGRVWDLRTGRCIMFLEGHL-----KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 340 ~~~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
+..++.|.++|..+.+.+.++.... ..++.+.|. +|+.++..-.+..|.+.|.++++.+.++.
T Consensus 120 Sdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 120 SDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp ECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEE
T ss_pred ECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEE
Confidence 6678999999999998887776422 346677776 67766666568899999999999988775
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=2.1e-06 Score=88.15 Aligned_cols=190 Identities=13% Similarity=0.060 Sum_probs=115.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEeecCCCC----------E-EEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc
Q psy11350 164 SQHVATASWSGLCKLWTVPECELVQTFRGHDCN----------V-GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT 232 (471)
Q Consensus 164 ~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~----------v-~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 232 (471)
+..|++++.++.|+-+|..+|+.+..+...... + ..+.+. +. .++.++.|+.|..+|..+|+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~v~v~~~dg~l~alD~~tG~ 138 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GD-----KVYVGTLDGRLIALDAKTGK 138 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BT-----EEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CC-----EEEEEcCCCEEEEEECCCCC
Confidence 567777888999999999999999887643211 0 112222 22 58888899999999999999
Q ss_pred ceeeecCCCCcceEEEEECC--CCCEEEEEeC----------------CCe--EEecccc-ccc---------------c
Q psy11350 233 PLANLEGHEPFRVSRIKFHP--SGRFLGTCCW----------------DHS--WRLDTPL-ANL---------------E 276 (471)
Q Consensus 233 ~~~~~~~~~~~~v~~~~~s~--~~~~i~~~~~----------------d~~--~~~~~~~-~~~---------------~ 276 (471)
.+..+..........+.-+| .+..++++.. +|. |...... ... .
T Consensus 139 ~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~ 218 (668)
T 1kv9_A 139 AIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQ 218 (668)
T ss_dssp EEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCC
T ss_pred EeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCC
Confidence 88776643210000000011 1223333322 222 3222100 000 0
Q ss_pred C-------CCCcceEEEEECCCCCEEEEEecCC-------------------eEEEEECCCCcEEEEeeC--CC------
Q psy11350 277 G-------HEPFRVSRIKFHPSGRFLGTCCWDH-------------------SWRLWDLNQGQEVLHQEG--HG------ 322 (471)
Q Consensus 277 ~-------~~~~~v~~l~~~~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~--~~------ 322 (471)
+ ........+++.|+...+++++.++ .|..+|..+++.+..+.. |.
T Consensus 219 g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~ 298 (668)
T 1kv9_A 219 GDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTA 298 (668)
T ss_dssp SSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred ccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccC
Confidence 0 0001123478888888888888776 399999999998877653 32
Q ss_pred -CCeEEEEEeCCCC---EEEEEeCCCeEEEEeCCCCeeEEEe
Q psy11350 323 -KPVYCMSFQGDGS---VVATGGLDAFGRVWDLRTGRCIMFL 360 (471)
Q Consensus 323 -~~v~~~~~s~d~~---~l~t~~~dg~i~iwd~~~~~~~~~~ 360 (471)
.+.....+..+|+ .++.++.+|.++++|..+|+.+...
T Consensus 299 ~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 299 TQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp CSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred CCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccc
Confidence 2333333444675 6889999999999999999987443
No 256
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.73 E-value=4.1e-06 Score=84.31 Aligned_cols=261 Identities=13% Similarity=0.012 Sum_probs=154.4
Q ss_pred EEEecCCCE----EEEEeCCCcEEEEeCCCCceEEEeecCCC----CEEE-EEEeeCCCCCCccEEEEEe------CCCc
Q psy11350 158 CSFSPDSQH----VATASWSGLCKLWTVPECELVQTFRGHDC----NVGA-IEFHPLPSEGAVCSLASCA------QDGS 222 (471)
Q Consensus 158 ~~~s~~~~~----l~tg~~dg~i~iwd~~~~~~~~~~~~h~~----~v~~-l~~~~~~~~~~~~~l~s~~------~dg~ 222 (471)
++++|.+.. |+.++.|+.|.-+|..+|+.+........ .+.+ ... .++ .++.++ .+|.
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g------~V~vg~~g~e~g~~g~ 183 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKD------KVIIGSSGAELGVRGY 183 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT------EEEECCBCGGGTCCCE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECC------EEEEEecccccCCCCe
Confidence 345444444 88888899999999999999877653220 1111 111 122 355554 3799
Q ss_pred EEEEeCCCCcceeeecCCCCc-------------------------------------ceEEEEECCCCCEEEEEeCCC-
Q psy11350 223 VKLWSLDKDTPLANLEGHEPF-------------------------------------RVSRIKFHPSGRFLGTCCWDH- 264 (471)
Q Consensus 223 i~iwd~~~~~~~~~~~~~~~~-------------------------------------~v~~~~~s~~~~~i~~~~~d~- 264 (471)
|..+|..+|+.+..+...... .-..+++.++...++.+..+.
T Consensus 184 v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~ 263 (599)
T 1w6s_A 184 LTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPA 263 (599)
T ss_dssp EEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCS
T ss_pred EEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCc
Confidence 999999999988766543211 001345666777777666542
Q ss_pred ---------------e-EEe--ccccc----cccCCC------CcceEEEEEC-CCC---CEEEEEecCCeEEEEECCCC
Q psy11350 265 ---------------S-WRL--DTPLA----NLEGHE------PFRVSRIKFH-PSG---RFLGTCCWDHSWRLWDLNQG 312 (471)
Q Consensus 265 ---------------~-~~~--~~~~~----~~~~~~------~~~v~~l~~~-~~~---~~l~~~~~dg~i~iwd~~~~ 312 (471)
. +-+ .+... ....|. .....-+... .+| ..++.++.+|.++++|.+++
T Consensus 264 p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 343 (599)
T 1w6s_A 264 PWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDG 343 (599)
T ss_dssp CSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCC
Confidence 1 111 11000 001110 0011112222 466 46777889999999999999
Q ss_pred cEEEEeeCC-------------CCCe--------------------------EEEEEeCCCCEEEEEe------------
Q psy11350 313 QEVLHQEGH-------------GKPV--------------------------YCMSFQGDGSVVATGG------------ 341 (471)
Q Consensus 313 ~~~~~~~~~-------------~~~v--------------------------~~~~~s~d~~~l~t~~------------ 341 (471)
+.+...... ..++ ..++++|+..++++..
T Consensus 344 ~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~ 423 (599)
T 1w6s_A 344 ALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFML 423 (599)
T ss_dssp CEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCC
T ss_pred CEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccc
Confidence 987655311 1111 2456777766665431
Q ss_pred ---------------------------CCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11350 342 ---------------------------LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 342 ---------------------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~ 394 (471)
..|.|..||+.+++.+-.... ..++..-.+...+.+++.++.||.|+.||.+
T Consensus 424 ~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~ 502 (599)
T 1w6s_A 424 PYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSD 502 (599)
T ss_dssp CCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETT
T ss_pred cccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECC
Confidence 347899999999988766542 1222211122256778889999999999999
Q ss_pred CccchheecccCCCccceeeccccceeeeecc
Q psy11350 395 KRRLLKWCTQLLPNSIGVTSLLTDLYIDVLES 426 (471)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 426 (471)
+|+.+..+..........+....+....+...
T Consensus 503 tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 503 TGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIY 534 (599)
T ss_dssp TCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCEEEEeeCCCCcEeccEEEEeCCEEEEEEE
Confidence 99999887655444334444445555544433
No 257
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.72 E-value=3.6e-05 Score=73.42 Aligned_cols=248 Identities=9% Similarity=-0.069 Sum_probs=152.5
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCccee
Q psy11350 156 SYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLA 235 (471)
Q Consensus 156 ~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 235 (471)
+|.+..+ ..+|+.+. ...|+.+++........+.. ...+..++|.+.... ++++-...+.|..+++.......
T Consensus 80 ~C~~~~~-~~~l~~~~-~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~----ly~~D~~~~~I~r~~~~g~~~~~ 152 (386)
T 3v65_B 80 SCKALGP-EPVLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRREL----VFWSDVTLDRILRANLNGSNVEE 152 (386)
T ss_dssp CEEECSS-CCEEEEEC-BSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTE----EEEEETTTTEEEEEETTSCCEEE
T ss_pred eECCccc-cceeEeec-CccceeeccCCCcEEEEecC-CCccEEEEEecCCCe----EEEEeCCCCcEEEEecCCCCcEE
Confidence 3444444 33454444 56788899876655544443 345789999986653 45555567889999987654333
Q ss_pred eecCCCCcceEEEEECCCCCEEEEEeC-CCeEEeccc----cccccCCCCcceEEEEECCCCCEEEEEec-C-CeEEEEE
Q psy11350 236 NLEGHEPFRVSRIKFHPSGRFLGTCCW-DHSWRLDTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCW-D-HSWRLWD 308 (471)
Q Consensus 236 ~~~~~~~~~v~~~~~s~~~~~i~~~~~-d~~~~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~-d-g~i~iwd 308 (471)
.+.... .....+++.+.+..|+.... .+.+..... ...+..........+++.|.+..|+.+.. . +.|..++
T Consensus 153 ~~~~~~-~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~ 231 (386)
T 3v65_B 153 VVSTGL-ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 231 (386)
T ss_dssp EECSSC-SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEeCCC-CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEe
Confidence 332222 24567888886665555443 344433211 11122222235789999997776666554 3 6899999
Q ss_pred CCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEE-eCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCc
Q psy11350 309 LNQGQEVLHQEGHGKPVYCMSFQGDGSVVATG-GLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387 (471)
Q Consensus 309 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~ 387 (471)
+............-...+.|+|+|++..|+.+ +..+.|..+|+........+........+|++ ..+.++++-...+.
T Consensus 232 ~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~ 310 (386)
T 3v65_B 232 MDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKS 310 (386)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTE
T ss_pred CCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCe
Confidence 87543333333334457899999866655554 45678999998654433334334456788888 35566667677888
Q ss_pred EEEEECCCccchheecccCCCccce
Q psy11350 388 VKIWDLRKRRLLKWCTQLLPNSIGV 412 (471)
Q Consensus 388 i~iwd~~~~~~~~~~~~~~~~~~~~ 412 (471)
|..++..+++.+..+......+..+
T Consensus 311 V~~~~~~~G~~~~~i~~~~~~p~gi 335 (386)
T 3v65_B 311 INSANKFTGKNQEIIRNKLHFPMDI 335 (386)
T ss_dssp EEEEETTTCCSCEEEECSCSCCCCE
T ss_pred EEEEECCCCcceEEEccCCCCCceE
Confidence 9999977888777776544433333
No 258
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.71 E-value=6e-05 Score=79.10 Aligned_cols=236 Identities=11% Similarity=-0.063 Sum_probs=148.3
Q ss_pred CcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEee--------------cCCCCEEEEEEeeCCCCCCccEEEEE
Q psy11350 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR--------------GHDCNVGAIEFHPLPSEGAVCSLASC 217 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~--------------~h~~~v~~l~~~~~~~~~~~~~l~s~ 217 (471)
...|.++...++|. |..|+..+-|.+++..++....... .....|.++...+.+. |-.|
T Consensus 257 ~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~------lWig 329 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN------IWIG 329 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC------EEEE
T ss_pred CceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC------EEEE
Confidence 45688888887775 5567765678899987655332211 1345788998888775 7778
Q ss_pred eCCCcEEEEeCCCCcceeeec--------CCCCcceEEEEECCCCCEEEEEeCCCeEEeccccc---ccc---CCCCcce
Q psy11350 218 AQDGSVKLWSLDKDTPLANLE--------GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA---NLE---GHEPFRV 283 (471)
Q Consensus 218 ~~dg~i~iwd~~~~~~~~~~~--------~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~---~~~---~~~~~~v 283 (471)
+.++-|..|+..++....... .-....|.++...++|...+.....|...+..... .+. ......|
T Consensus 330 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v 409 (781)
T 3v9f_A 330 TWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSV 409 (781)
T ss_dssp EBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBE
T ss_pred ecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcce
Confidence 877889999976554322111 11223689999988887665443555544422111 110 1123468
Q ss_pred EEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee--CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec
Q psy11350 284 SRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE--GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361 (471)
Q Consensus 284 ~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~ 361 (471)
.++...+++. |.+|+.++-|..+|..+++...... .....|.++...++|.+.+ |+. +-|.+||..+++......
T Consensus 410 ~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~ 486 (781)
T 3v9f_A 410 LCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYD 486 (781)
T ss_dssp EEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEEC
T ss_pred EEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEeccc
Confidence 8999887776 4557777789999988765433221 1346799999888876554 444 568899988765433222
Q ss_pred cc-----CcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccc
Q psy11350 362 GH-----LKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398 (471)
Q Consensus 362 ~h-----~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 398 (471)
.. ...|.++...++|.+.+. +.++-|..||..+++.
T Consensus 487 ~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~ 527 (781)
T 3v9f_A 487 TSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLV 527 (781)
T ss_dssp TTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEE
T ss_pred CcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeE
Confidence 12 357999999988886654 4444477788876643
No 259
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.67 E-value=5.2e-06 Score=73.17 Aligned_cols=168 Identities=10% Similarity=0.052 Sum_probs=116.4
Q ss_pred ceEEEeecCCC--CEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeC
Q psy11350 185 ELVQTFRGHDC--NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW 262 (471)
Q Consensus 185 ~~~~~~~~h~~--~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~ 262 (471)
+.+.++ .|.. ....+.|+. +. ++.+.+.+|.|+++|+.+++.+..+ ....
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~~-~~-----Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-------------------- 95 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFHQ-GH-----FFESTGHQGTLRQLSLESAQPVWME-RLGN-------------------- 95 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TE-----EEEEETTTTEEEECCSSCSSCSEEE-ECTT--------------------
T ss_pred EEEEEE-cCCCccccceEEEEC-CE-----EEEEcCCCCEEEEEECCCCcEEeEE-CCCC--------------------
Confidence 445555 3433 346888874 33 6788888899999999999877665 2211
Q ss_pred CCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeC
Q psy11350 263 DHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGL 342 (471)
Q Consensus 263 d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~ 342 (471)
.--..+++.. ++.....-.++.+.+||..+.+.+.++...... ..++ +|++.|+.+..
T Consensus 96 ------------------~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG-wGLt--~Dg~~L~vSdG 153 (268)
T 3nok_A 96 ------------------IFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG-WGLC--YWNGKLVRSDG 153 (268)
T ss_dssp ------------------CCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSCC-CCEE--EETTEEEEECS
T ss_pred ------------------cceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCce-eEEe--cCCCEEEEECC
Confidence 0112344432 233334446889999999999999888643222 3344 56788888778
Q ss_pred CCeEEEEeCCCCeeEEEecccC-----cCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 343 DAFGRVWDLRTGRCIMFLEGHL-----KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 343 dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
++.|.++|..+.+.+.++.... ..++.+.|. +|+.++..-.++.|.+.|..+++.+.++.
T Consensus 154 s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 154 GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEE
T ss_pred CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEE
Confidence 9999999999998887765322 245778887 77666665578899999999999988775
No 260
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.66 E-value=3.4e-05 Score=68.31 Aligned_cols=207 Identities=17% Similarity=0.111 Sum_probs=131.1
Q ss_pred eecCCcCeEEEEEecCCCEEE-EEeCCCcEEEEeCCCCceEEEeec-CCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEE
Q psy11350 148 QVGDTRPISYCSFSPDSQHVA-TASWSGLCKLWTVPECELVQTFRG-HDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL 225 (471)
Q Consensus 148 ~~gh~~~V~~~~~s~~~~~l~-tg~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 225 (471)
+.|-...+..++|+|++..|+ +...++.|...|+. ++.++.+.- -....-.|++.+++. ++++.-.++.+.+
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-----~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-----FVISDERDYAIYV 95 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-----EEEEETTTTEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-----EEEEECCCCcEEE
Confidence 335567899999999877655 56778899999987 888887642 225677899988775 5566656788888
Q ss_pred EeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecCCeEE
Q psy11350 226 WSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR 305 (471)
Q Consensus 226 wd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~ 305 (471)
+++.....+..... +. .+. ...........|+|+|.++.|+++.......
T Consensus 96 ~~v~~~~~i~~~~~--------~~--------------------~~~--~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~ 145 (255)
T 3qqz_A 96 ISLTPNSEVKILKK--------IK--------------------IPL--QESPTNCGFEGLAYSRQDHTFWFFKEKNPIE 145 (255)
T ss_dssp EEECTTCCEEEEEE--------EE--------------------CCC--SSCCCSSCCEEEEEETTTTEEEEEEESSSEE
T ss_pred EEcCCCCeeeeeee--------ec--------------------ccc--ccccccCCcceEEEeCCCCEEEEEECcCCce
Confidence 88765432211100 00 000 0011133578899999887777776655445
Q ss_pred EEECC---CCcEEEEee-------CCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEeCCCCeeEEEeccc---------Cc
Q psy11350 306 LWDLN---QGQEVLHQE-------GHGKPVYCMSFQG-DGSVVATGGLDAFGRVWDLRTGRCIMFLEGH---------LK 365 (471)
Q Consensus 306 iwd~~---~~~~~~~~~-------~~~~~v~~~~~s~-d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h---------~~ 365 (471)
+|.+. ....+..+. .+...+.+++++| .+.+++.....+.+.++|.. |+.+..+.-. ..
T Consensus 146 i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~ 224 (255)
T 3qqz_A 146 VYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIK 224 (255)
T ss_dssp EEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCC
T ss_pred EEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccC
Confidence 55443 111111111 1334578999999 45667777778889999965 5555444321 13
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11350 366 SVFSVDFSPDGYHLATGSEDNAVKIWD 392 (471)
Q Consensus 366 ~v~~~~~sp~~~~l~s~s~dg~i~iwd 392 (471)
....|+|.++|+..++ +..+.++.+.
T Consensus 225 qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 225 QAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp SEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred CCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 6789999999985555 6777666654
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.61 E-value=8.2e-05 Score=78.03 Aligned_cols=235 Identities=11% Similarity=0.014 Sum_probs=148.6
Q ss_pred CcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEee---------cCCCCEEEEEEeeCCCCCCccEEEEEeCCCc
Q psy11350 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR---------GHDCNVGAIEFHPLPSEGAVCSLASCAQDGS 222 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~---------~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 222 (471)
...|.++...++|. |..|+.++-|..|+..+........ .....|.++...+++. |..|+.++-
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~------lWigt~~~G 384 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK------LWIGTDGGG 384 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC------EEEEEBSSC
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC------EEEEeCCCc
Confidence 45789999888876 6667778889999977654332211 1235688888877775 677776777
Q ss_pred EEEEeCCCCcceeeec--CCCCcceEEEEECCCCCEEEEEeC-CCeEEecccc---cccc--CCCCcceEEEEECCCCCE
Q psy11350 223 VKLWSLDKDTPLANLE--GHEPFRVSRIKFHPSGRFLGTCCW-DHSWRLDTPL---ANLE--GHEPFRVSRIKFHPSGRF 294 (471)
Q Consensus 223 i~iwd~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~i~~~~~-d~~~~~~~~~---~~~~--~~~~~~v~~l~~~~~~~~ 294 (471)
|..|+..++....... ......|.++...++|.+.+ |+. .|...+.... ..+. ......|.++...+++.
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~- 462 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK- 462 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-
Confidence 9999976543222111 11223788999888887665 444 4544442211 1111 11234689999888776
Q ss_pred EEEEecCCeEEEEECCCCcEEEEeeCC-----CCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecc---cCcC
Q psy11350 295 LGTCCWDHSWRLWDLNQGQEVLHQEGH-----GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG---HLKS 366 (471)
Q Consensus 295 l~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~---h~~~ 366 (471)
|..|+. +-|.+||..+++........ ...|.++...++|.+.+. +.++-+..||..+++....... ....
T Consensus 463 lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~l~~~~ 540 (781)
T 3v9f_A 463 IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVRKFNQYEGFCSNT 540 (781)
T ss_dssp EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEEEECTTTTCSCSC
T ss_pred EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEEEccCCCCCCCCe
Confidence 555565 56999998876543332222 467899999988876554 4434477899877654332111 2356
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCccc
Q psy11350 367 VFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398 (471)
Q Consensus 367 v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 398 (471)
|.++...++|.+.++. .+|.|..||..+++.
T Consensus 541 i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 541 INQIYRSSKGQMWLAT-GEGLVCFPSARNFDY 571 (781)
T ss_dssp EEEEEECTTSCEEEEE-TTEEEEESCTTTCCC
T ss_pred eEEEEECCCCCEEEEE-CCCceEEECCCCCcE
Confidence 8999998888866554 466658888877653
No 262
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.60 E-value=0.00022 Score=65.91 Aligned_cols=209 Identities=10% Similarity=-0.055 Sum_probs=126.7
Q ss_pred CcCeEEEEEecCCCEEEEEe-CCCcEEEEeCCC----CceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEE
Q psy11350 152 TRPISYCSFSPDSQHVATAS-WSGLCKLWTVPE----CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~-~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw 226 (471)
-..+.+++|++.+..|+.+. .++.|..+++.+ ......+...-.....+++.+.+.+ ++++-...+.|.+.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~----ly~~d~~~~~I~~~ 104 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN----IYWTDSVLGTVSVA 104 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTE----EEEEETTTTEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCe----EEEEECCCCEEEEE
Confidence 45678999999776666554 568999999875 2222223222234568888865542 44555667788888
Q ss_pred eCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecC--CeE
Q psy11350 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD--HSW 304 (471)
Q Consensus 227 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--g~i 304 (471)
++........+... ......++++|.+..|+.+... +.|
T Consensus 105 ~~~g~~~~~~~~~~---------------------------------------~~~P~~iavdp~~g~ly~~d~~~~~~I 145 (316)
T 1ijq_A 105 DTKGVKRKTLFREN---------------------------------------GSKPRAIVVDPVHGFMYWTDWGTPAKI 145 (316)
T ss_dssp ETTSSSEEEEEECT---------------------------------------TCCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred eCCCCceEEEEECC---------------------------------------CCCcceEEeCCCCCEEEEEccCCCCeE
Confidence 87533211111100 1246778888866665555443 678
Q ss_pred EEEECCCCcEEEEe-eCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCCCeeEEEec--ccCcCEEEEEEcCCCCEEE
Q psy11350 305 RLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTGRCIMFLE--GHLKSVFSVDFSPDGYHLA 380 (471)
Q Consensus 305 ~iwd~~~~~~~~~~-~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~ 380 (471)
..+++.... ...+ ...-...+.++++|++..|+.+. ..+.|..+|+.......... .......++++. .+.+++
T Consensus 146 ~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~ 223 (316)
T 1ijq_A 146 KKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFW 223 (316)
T ss_dssp EEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEE
T ss_pred EEEcCCCCC-eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEE
Confidence 888875432 2222 22335578999999766665554 56789999987432221222 223457788885 456666
Q ss_pred EEeCCCcEEEEECCCccchheeccc
Q psy11350 381 TGSEDNAVKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 381 s~s~dg~i~iwd~~~~~~~~~~~~~ 405 (471)
+-...+.|..++..+++.+..+...
T Consensus 224 ~d~~~~~V~~~~~~~g~~~~~i~~~ 248 (316)
T 1ijq_A 224 TDIINEAIFSANRLTGSDVNLLAEN 248 (316)
T ss_dssp EETTTTEEEEEETTTCCCCEEEECS
T ss_pred EECCCCeEEEEeCCCCcceEEEecC
Confidence 6667788999998888877766543
No 263
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.59 E-value=2.6e-05 Score=78.44 Aligned_cols=188 Identities=10% Similarity=0.038 Sum_probs=109.6
Q ss_pred CCEEEEEeC-CCcEEEEeC-CCCceEEEeecCCCC----------E-EEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC
Q psy11350 164 SQHVATASW-SGLCKLWTV-PECELVQTFRGHDCN----------V-GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK 230 (471)
Q Consensus 164 ~~~l~tg~~-dg~i~iwd~-~~~~~~~~~~~h~~~----------v-~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 230 (471)
+..|++++. ++.|.-+|. .+|+.+..+...... + ..++.. +. .++.++.|+.|..+|..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~v~v~~~dg~l~alD~~t 134 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AG-----QIVKKQANGHLLALDAKT 134 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TT-----EEEEECTTSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE--CC-----EEEEEeCCCEEEEEECCC
Confidence 456777777 899999999 899998877532210 0 112221 22 588888899999999999
Q ss_pred CcceeeecCCCC---cceE-EEEECCCCCEEEEEeC------CCe------------EEecccccccc------------
Q psy11350 231 DTPLANLEGHEP---FRVS-RIKFHPSGRFLGTCCW------DHS------------WRLDTPLANLE------------ 276 (471)
Q Consensus 231 ~~~~~~~~~~~~---~~v~-~~~~s~~~~~i~~~~~------d~~------------~~~~~~~~~~~------------ 276 (471)
|+.+..+..... ..+. .... .+..+++++. ++. |..........
T Consensus 135 G~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~ 212 (571)
T 2ad6_A 135 GKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANP 212 (571)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccc
Confidence 998876653220 0111 0011 1233344332 333 22211100000
Q ss_pred -----------------CCCCc-ceEEEEECCCCCEEEEEecC----------------CeEEEEECCCCcEEEEeeC--
Q psy11350 277 -----------------GHEPF-RVSRIKFHPSGRFLGTCCWD----------------HSWRLWDLNQGQEVLHQEG-- 320 (471)
Q Consensus 277 -----------------~~~~~-~v~~l~~~~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~-- 320 (471)
.+... ....+++.+....++.++.+ +.|..+|..+++.+..+..
T Consensus 213 ~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~ 292 (571)
T 2ad6_A 213 HYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTP 292 (571)
T ss_dssp GGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCC
Confidence 00000 01235666766677666532 3699999999998877653
Q ss_pred CC--------CCeEEEEEeCCCC---EEEEEeCCCeEEEEeCCCCeeEEEec
Q psy11350 321 HG--------KPVYCMSFQGDGS---VVATGGLDAFGRVWDLRTGRCIMFLE 361 (471)
Q Consensus 321 ~~--------~~v~~~~~s~d~~---~l~t~~~dg~i~iwd~~~~~~~~~~~ 361 (471)
|. .++. +....+|+ .++.++.+|.++++|..+|+.+..+.
T Consensus 293 ~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 293 HDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp TCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeec
Confidence 21 2222 22334674 67788899999999999998876654
No 264
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.56 E-value=1e-05 Score=81.52 Aligned_cols=260 Identities=12% Similarity=-0.009 Sum_probs=150.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEeecCCC----CEE-EEEEeeCCCCCCccEEEEEe------CCCcEEEEeCCCCc
Q psy11350 164 SQHVATASWSGLCKLWTVPECELVQTFRGHDC----NVG-AIEFHPLPSEGAVCSLASCA------QDGSVKLWSLDKDT 232 (471)
Q Consensus 164 ~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~----~v~-~l~~~~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~ 232 (471)
+..|+.++.++.|.-+|..+|+.+..+..... .+. ......+...... .++.++ .+|.|..+|..+|+
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~-~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKV-LLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCE-EEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcE-EEEEeccccccCCCCEEEEEECCCCC
Confidence 56788888999999999999999887664321 111 1111222101010 244444 37899999999998
Q ss_pred ceeeecCCCC----------------------------------------cceEEEEECCCCCEEEEEeCC---------
Q psy11350 233 PLANLEGHEP----------------------------------------FRVSRIKFHPSGRFLGTCCWD--------- 263 (471)
Q Consensus 233 ~~~~~~~~~~----------------------------------------~~v~~~~~s~~~~~i~~~~~d--------- 263 (471)
.+........ ..-..+++.|+...++++..+
T Consensus 196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 7765543210 001235666777777766531
Q ss_pred ---------------CeEE-e--ccccc--cc--cCCC------CcceEEEEEC-CCCC---EEEEEecCCeEEEEECCC
Q psy11350 264 ---------------HSWR-L--DTPLA--NL--EGHE------PFRVSRIKFH-PSGR---FLGTCCWDHSWRLWDLNQ 311 (471)
Q Consensus 264 ---------------~~~~-~--~~~~~--~~--~~~~------~~~v~~l~~~-~~~~---~l~~~~~dg~i~iwd~~~ 311 (471)
+.+. + .+... .+ ..|. .....-+... .+|+ .++.++.+|.++++|..+
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 1211 1 11100 00 0110 0011112221 4564 688899999999999999
Q ss_pred CcEEEEeeCCC-------------CCe--------------------------------EEEEEeCCCCEEEEEe-----
Q psy11350 312 GQEVLHQEGHG-------------KPV--------------------------------YCMSFQGDGSVVATGG----- 341 (471)
Q Consensus 312 ~~~~~~~~~~~-------------~~v--------------------------------~~~~~s~d~~~l~t~~----- 341 (471)
++.+..+.... .++ ..++++|+..++++..
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 99876654321 000 1346677555555432
Q ss_pred ----------------------------CCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy11350 342 ----------------------------LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393 (471)
Q Consensus 342 ----------------------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~ 393 (471)
.+|.|..||+.+++.+-....+ .++..-.....+.+++.|+.||.|+.||.
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 2578999999999887666532 22222112224678888999999999999
Q ss_pred CCccchheecccCCCccceeeccccceeeeec
Q psy11350 394 RKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLE 425 (471)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 425 (471)
++++.+..+..........++...+....+..
T Consensus 515 ~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 515 KSGKELWKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp TTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CCCCEEEEecCCCCcccCceEEEECCEEEEEE
Confidence 99999988876544333334433455444443
No 265
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.54 E-value=0.00025 Score=65.53 Aligned_cols=185 Identities=10% Similarity=-0.091 Sum_probs=114.0
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCC---cceeeecCCCC
Q psy11350 166 HVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKD---TPLANLEGHEP 242 (471)
Q Consensus 166 ~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~ 242 (471)
+|+.+. ...|+..|+.+.+....+.. ...+.+++|.+.+.. ++++-...+.|..+++... .....+..
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~----ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~--- 73 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNR----IYWSDLSQRMICSTQLDRAHGVSSYDTVIS--- 73 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTE----EEEEETTTTEEEEEEC--------CEEEEC---
T ss_pred EEEEEC-CCeEEEEECCCcceEehhcC-CCceEEEEEEeCCCE----EEEEECCCCcEEEEECCCCCCCcccEEEEe---
Confidence 344444 46789999887766555543 456789999987652 4555556688988887642 11111100
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEE-EEecCCeEEEEECCCCcEEEEeeCC
Q psy11350 243 FRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLG-TCCWDHSWRLWDLNQGQEVLHQEGH 321 (471)
Q Consensus 243 ~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~ 321 (471)
.. -.....+++.+.+..|+ +-...+.|.++++........+...
T Consensus 74 ----------------------------------~~-~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~ 118 (316)
T 1ijq_A 74 ----------------------------------RD-IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN 118 (316)
T ss_dssp ----------------------------------SS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT
T ss_pred ----------------------------------CC-CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECC
Confidence 00 11356788886555444 4456788999998754433333333
Q ss_pred CCCeEEEEEeCCCCEEEEEeCC--CeEEEEeCCCCeeEEEe-cccCcCEEEEEEcCCCCEEEEE-eCCCcEEEEECCC
Q psy11350 322 GKPVYCMSFQGDGSVVATGGLD--AFGRVWDLRTGRCIMFL-EGHLKSVFSVDFSPDGYHLATG-SEDNAVKIWDLRK 395 (471)
Q Consensus 322 ~~~v~~~~~s~d~~~l~t~~~d--g~i~iwd~~~~~~~~~~-~~h~~~v~~~~~sp~~~~l~s~-s~dg~i~iwd~~~ 395 (471)
......++++|.+..|+.+... +.|..+++... ....+ ...-.....++++|++..|+.+ +..+.|..+|+..
T Consensus 119 ~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 119 GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 4567899999966655555443 68888887533 33333 2234568899999876666554 4567899999874
No 266
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.54 E-value=5.2e-06 Score=85.24 Aligned_cols=236 Identities=11% Similarity=0.093 Sum_probs=133.9
Q ss_pred EEEEec-CCCEEEEEeCCC-----------cEEEEeCCCCceE--EEee-cCCCCEEEEEEeeCCCCCCccEEEEEe-CC
Q psy11350 157 YCSFSP-DSQHVATASWSG-----------LCKLWTVPECELV--QTFR-GHDCNVGAIEFHPLPSEGAVCSLASCA-QD 220 (471)
Q Consensus 157 ~~~~s~-~~~~l~tg~~dg-----------~i~iwd~~~~~~~--~~~~-~h~~~v~~l~~~~~~~~~~~~~l~s~~-~d 220 (471)
++++.| ++++++.|+.+. .+.+||+.+++.. ..+. .+.....++++.+++. +++.|+ .+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~-----lyv~GG~~~ 264 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ-----IVVTGGNDA 264 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC-----EEEECSSST
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCC-----EEEeCCCCC
Confidence 556777 888888887543 5889999876532 2222 2233334567777776 677777 45
Q ss_pred CcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEe-CCCe-----EEecccc-cc---ccC----CCCcceEEE
Q psy11350 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHS-----WRLDTPL-AN---LEG----HEPFRVSRI 286 (471)
Q Consensus 221 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~-~d~~-----~~~~~~~-~~---~~~----~~~~~v~~l 286 (471)
..+.+||..+++....-.......-.+++..++|+.++.|+ .++. +.+..+. .. +.. .....-...
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~ 344 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQG 344 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTG
T ss_pred CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccc
Confidence 68999998876543332222222334567778999999988 3421 2211110 00 000 000000001
Q ss_pred EECCCCCEEEEEecCC---------eEEEEECCCCcEEEEeeCCC---------CCeEEEEEeC-CCCEEEEEeCCC---
Q psy11350 287 KFHPSGRFLGTCCWDH---------SWRLWDLNQGQEVLHQEGHG---------KPVYCMSFQG-DGSVVATGGLDA--- 344 (471)
Q Consensus 287 ~~~~~~~~l~~~~~dg---------~i~iwd~~~~~~~~~~~~~~---------~~v~~~~~s~-d~~~l~t~~~dg--- 344 (471)
.+..++..++.++.+| .+..||..+.........+. ..-.++.|.. ++++++.|+.++
T Consensus 345 ~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~ 424 (656)
T 1k3i_A 345 LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD 424 (656)
T ss_dssp GGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS
T ss_pred eeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC
Confidence 1223455555555443 56788888765433222111 1234555544 778888888543
Q ss_pred --------eEEEEeCCCCeeEEEe--cccCcC-EEEEEEcCCCCEEEEEeCC-----------CcEEEEECCCcc
Q psy11350 345 --------FGRVWDLRTGRCIMFL--EGHLKS-VFSVDFSPDGYHLATGSED-----------NAVKIWDLRKRR 397 (471)
Q Consensus 345 --------~i~iwd~~~~~~~~~~--~~h~~~-v~~~~~sp~~~~l~s~s~d-----------g~i~iwd~~~~~ 397 (471)
.|.+||..+..-.... ..+... -.+++..|++++++.|+.+ ..+.+||..+.+
T Consensus 425 ~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 425 SDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp SBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 6888888776544332 112222 2345667899999999854 468999987764
No 267
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.53 E-value=8.7e-05 Score=68.62 Aligned_cols=239 Identities=10% Similarity=-0.015 Sum_probs=141.9
Q ss_pred EEEEEeCCCcEEEEeCCCCc--eEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCc
Q psy11350 166 HVATASWSGLCKLWTVPECE--LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPF 243 (471)
Q Consensus 166 ~l~tg~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 243 (471)
+|+.+. ...|+.+++.... ....+.+ ...+.+++|.+.... ++.+-...+.|..+++..+.....+....-.
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~----lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~ 79 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGL----IYWSDVSEEAIKRTEFNKTESVQNVVVSGLL 79 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTE----EEEEETTTTEEEEEETTSSSCCCEEEEECCS
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCE----EEEEECCCCcEEEEEccCCCceEEEEcCCCC
Confidence 344443 5678888987653 2222222 234668999986652 4555566788999998765322111111112
Q ss_pred ceEEEEECCCCCEEEEEe-CCCeEEeccc----cccccCCCCcceEEEEECCCCCEEEEEec--CCeEEEEECCCCcEEE
Q psy11350 244 RVSRIKFHPSGRFLGTCC-WDHSWRLDTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCW--DHSWRLWDLNQGQEVL 316 (471)
Q Consensus 244 ~v~~~~~s~~~~~i~~~~-~d~~~~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~ 316 (471)
....+++.+.+..|+.+. ..+.+.+... ...+..........+++.|.+..|+.+.. .+.|..+++.......
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 466788887655555443 3344333211 11222122335789999997777666653 5789999886433222
Q ss_pred EeeCCCCCeEEEEEeCCCCEEEEE-eCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 317 HQEGHGKPVYCMSFQGDGSVVATG-GLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 317 ~~~~~~~~v~~~~~s~d~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
.....-...+.++++|++..|+.+ +..+.|..+|+........+.+......++++. .+.++++-...+.|..++..+
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~ 238 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYT 238 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCC
Confidence 222233456899999966655555 456789999986443322333344567888885 345566666778899999988
Q ss_pred ccchheecccCCCccc
Q psy11350 396 RRLLKWCTQLLPNSIG 411 (471)
Q Consensus 396 ~~~~~~~~~~~~~~~~ 411 (471)
++.+..+......+..
T Consensus 239 G~~~~~i~~~~~~P~~ 254 (318)
T 3sov_A 239 GEGLREIHSDIFSPMD 254 (318)
T ss_dssp CCSCEEEECCCSSCCC
T ss_pred CCceEEEeCCCCCCcE
Confidence 8877766554333333
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.52 E-value=5.2e-06 Score=86.56 Aligned_cols=197 Identities=16% Similarity=0.117 Sum_probs=112.2
Q ss_pred cCCc-CeEEEEEe-cCCCEEEEEeC-CC----cEEEEeCCCC-ceEE-EeecCCCCEEEEEEeeCCCCCCccEEEEEeCC
Q psy11350 150 GDTR-PISYCSFS-PDSQHVATASW-SG----LCKLWTVPEC-ELVQ-TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220 (471)
Q Consensus 150 gh~~-~V~~~~~s-~~~~~l~tg~~-dg----~i~iwd~~~~-~~~~-~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d 220 (471)
+|.- .+...+|| |||++||.+.. +| .|+++|+.++ +.+. .+.. ....+.|+|++. .|+....+
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~-----~l~y~~~d 241 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHT-----SLFYVTKD 241 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTT-----EEEEEEEC
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCC-----EEEEEEEC
Confidence 4443 68889999 99999886543 33 4999999988 6321 1111 124688999997 45555544
Q ss_pred -----CcEEEEeCCCCcce--eeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCC
Q psy11350 221 -----GSVKLWSLDKDTPL--ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGR 293 (471)
Q Consensus 221 -----g~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 293 (471)
..|.++++.+++.. ..+.... ......+.|+|||+
T Consensus 242 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~--------------------------------------~~~~~~~~~SpDg~ 283 (751)
T 2xe4_A 242 ETLRENKVWRHVMGKLQSEDVCLYEEHN--------------------------------------PLFSAFMYKAADTN 283 (751)
T ss_dssp TTCCEEEEEEEETTSCGGGCEEEEECCC--------------------------------------TTCEEEEEECTTSS
T ss_pred CCCCCCEEEEEECCCCchhcEEEEecCC--------------------------------------CceEEEEEECCCCC
Confidence 25677777665321 1111111 11244567777777
Q ss_pred EEEEEec---CCeEEEEECCCC--cE--EEEeeCCCCCeEEEEEeCCCCEEEEEeCC----CeEEEEeCCCCeeEEE-ec
Q psy11350 294 FLGTCCW---DHSWRLWDLNQG--QE--VLHQEGHGKPVYCMSFQGDGSVVATGGLD----AFGRVWDLRTGRCIMF-LE 361 (471)
Q Consensus 294 ~l~~~~~---dg~i~iwd~~~~--~~--~~~~~~~~~~v~~~~~s~d~~~l~t~~~d----g~i~iwd~~~~~~~~~-~~ 361 (471)
+|+..+. ...|.++|+.++ +. ............++.|+.++.+++....+ ..|..+|+.++..... +.
T Consensus 284 ~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li 363 (751)
T 2xe4_A 284 TLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLV 363 (751)
T ss_dssp EEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEE
T ss_pred EEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEE
Confidence 7665542 346888998875 22 22233344566666665544455554443 3677788765322122 22
Q ss_pred ccCc--CEEEEEEcCCCCEEEEEeCCCc--EEEEEC
Q psy11350 362 GHLK--SVFSVDFSPDGYHLATGSEDNA--VKIWDL 393 (471)
Q Consensus 362 ~h~~--~v~~~~~sp~~~~l~s~s~dg~--i~iwd~ 393 (471)
.|.. .+..+.+. .+.++++...+|. |.++|+
T Consensus 364 ~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 364 DHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp CCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred CCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 3333 45566665 3345566777776 455565
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.48 E-value=6.1e-05 Score=75.81 Aligned_cols=194 Identities=8% Similarity=0.015 Sum_probs=113.1
Q ss_pred CCEEEEEeC-CCcEEEEeC-CCCceEEEeecCCCC-----------EEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC
Q psy11350 164 SQHVATASW-SGLCKLWTV-PECELVQTFRGHDCN-----------VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK 230 (471)
Q Consensus 164 ~~~l~tg~~-dg~i~iwd~-~~~~~~~~~~~h~~~-----------v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 230 (471)
+..|++++. ++.|.-+|. .+|+.+..+...... ...+++.|.+.. ....++.++.|+.|..+|..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~-~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGK-TPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSS-SCCEEEEECTTSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCc-ceeEEEEEcCCCEEEEEECCC
Confidence 456777777 899999999 899999887643210 123445333320 001378888999999999999
Q ss_pred CcceeeecCCCC---cceE-EEEECCCCCEEEEEeC------CCe------------EEecccccccc------------
Q psy11350 231 DTPLANLEGHEP---FRVS-RIKFHPSGRFLGTCCW------DHS------------WRLDTPLANLE------------ 276 (471)
Q Consensus 231 ~~~~~~~~~~~~---~~v~-~~~~s~~~~~i~~~~~------d~~------------~~~~~~~~~~~------------ 276 (471)
|+.+........ ..+. ...+ .++ .+++++. ++. |..........
T Consensus 141 G~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 998876543220 0111 0011 122 3333321 232 32221110000
Q ss_pred -------------C----CCCcce-EEEEECCCCCEEEEEecC----------------CeEEEEECCCCcEEEEeeCCC
Q psy11350 277 -------------G----HEPFRV-SRIKFHPSGRFLGTCCWD----------------HSWRLWDLNQGQEVLHQEGHG 322 (471)
Q Consensus 277 -------------~----~~~~~v-~~l~~~~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~ 322 (471)
+ .....+ ..+++.+....++.++.+ +.|..+|..+++.+..++...
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~ 298 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP 298 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence 0 000001 135566777777777655 489999999999887765321
Q ss_pred ----------CCeEEEEEe-CCC---CEEEEEeCCCeEEEEeCCCCeeEEEec
Q psy11350 323 ----------KPVYCMSFQ-GDG---SVVATGGLDAFGRVWDLRTGRCIMFLE 361 (471)
Q Consensus 323 ----------~~v~~~~~s-~d~---~~l~t~~~dg~i~iwd~~~~~~~~~~~ 361 (471)
.++. +... .+| ..++.++.+|.++++|..+|+.+....
T Consensus 299 ~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 299 HDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp TCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 2222 2332 467 567788999999999999998876553
No 270
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.47 E-value=0.00036 Score=66.78 Aligned_cols=218 Identities=10% Similarity=-0.068 Sum_probs=135.0
Q ss_pred cCCcCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCC----ceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEE
Q psy11350 150 GDTRPISYCSFSPDSQHVATAS-WSGLCKLWTVPEC----ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 150 gh~~~V~~~~~s~~~~~l~tg~-~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 224 (471)
..-..+..++|++.+..|+.+. ..+.|+.+++... .....+.........|++.+.+.+ ++++-...+.|.
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~----lY~~d~~~~~I~ 184 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN----IYWTDSVLGTVS 184 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTE----EEEEETTTTEEE
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCc----eEEEECCCCeEE
Confidence 3456788999999777766554 5678999988652 233333333456778888875542 455555667888
Q ss_pred EEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEec--CC
Q psy11350 225 LWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW--DH 302 (471)
Q Consensus 225 iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg 302 (471)
+.+++.......+... ......|++.|.+.+|+.... .+
T Consensus 185 ~~~~~g~~~~~l~~~~---------------------------------------~~~P~~iavdp~~g~ly~td~~~~~ 225 (400)
T 3p5b_L 185 VADTKGVKRKTLFREN---------------------------------------GSKPRAIVVDPVHGFMYWTDWGTPA 225 (400)
T ss_dssp EECTTTCSEEEEEECS---------------------------------------SCCEEEEEEETTTTEEEEEECSSSC
T ss_pred EEeCCCCceEEEEeCC---------------------------------------CCCcceEEEecccCeEEEEeCCCCC
Confidence 8887543222111111 113678888886666665543 36
Q ss_pred eEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCCCeeEEEec--ccCcCEEEEEEcCCCCEE
Q psy11350 303 SWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTGRCIMFLE--GHLKSVFSVDFSPDGYHL 379 (471)
Q Consensus 303 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l 379 (471)
.|...++............-...+.|++++++..|+.+. ..+.|..+|+........+. .......++++. .+.++
T Consensus 226 ~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~ly 304 (400)
T 3p5b_L 226 KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVF 304 (400)
T ss_dssp CEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEE
T ss_pred EEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEE
Confidence 788888865433333333335678999998777666654 56789999986543322222 223456778774 44566
Q ss_pred EEEeCCCcEEEEECCCccchheecccCCCccc
Q psy11350 380 ATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411 (471)
Q Consensus 380 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 411 (471)
++-...+.|..+|..+++.+..+......+..
T Consensus 305 wtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~ 336 (400)
T 3p5b_L 305 WTDIINEAIFSANRLTGSDVNLLAENLLSPED 336 (400)
T ss_dssp EEESSSCSEEEEESSSCCCCEEEECSCSCEEE
T ss_pred EecCCCCeEEEEEcCCCCceEEEecCCCCCce
Confidence 66677788999998888887777644433333
No 271
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.46 E-value=0.00012 Score=67.35 Aligned_cols=204 Identities=11% Similarity=0.187 Sum_probs=130.0
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCC---CCCccEEEEEeC--CCcEEEEeCC--CCccee
Q psy11350 163 DSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPS---EGAVCSLASCAQ--DGSVKLWSLD--KDTPLA 235 (471)
Q Consensus 163 ~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~---~~~~~~l~s~~~--dg~i~iwd~~--~~~~~~ 235 (471)
...+++.....+-+.+||+ +|+.+..+.. +.++.+..-|.-. ......+++.-. +++|.+|++. ++ .+.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-cee
Confidence 4456666677889999999 8999988864 6778887777321 000002334434 5889999763 33 233
Q ss_pred eecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEE--CCC-CC-EEEEEecCCeEEEEECC-
Q psy11350 236 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKF--HPS-GR-FLGTCCWDHSWRLWDLN- 310 (471)
Q Consensus 236 ~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~--~~~-~~-~l~~~~~dg~i~iwd~~- 310 (471)
.+..... +. ......+..+++ +|. +. ++++...+|.+..|++.
T Consensus 115 ~i~~~~~----------------------------pv----~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~ 162 (355)
T 3amr_A 115 SMTDPDH----------------------------PI----ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKA 162 (355)
T ss_dssp ECSCTTS----------------------------CE----ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEE
T ss_pred ecccccc----------------------------Cc----CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEe
Confidence 3311100 00 000124566777 664 43 67888889999999883
Q ss_pred ------CCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCC-----CCeeEEEec-cc-CcCEEEEEEc--CC
Q psy11350 311 ------QGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR-----TGRCIMFLE-GH-LKSVFSVDFS--PD 375 (471)
Q Consensus 311 ------~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~-----~~~~~~~~~-~h-~~~v~~~~~s--p~ 375 (471)
+.+.++++.. ...+..+...+....|+.+-.+.-|..++.+ +++.+..+. ++ ...+..|++. ++
T Consensus 163 ~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~ 241 (355)
T 3amr_A 163 DKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAAD 241 (355)
T ss_dssp CTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGG
T ss_pred CCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCC
Confidence 3355666654 4578889999988899999998777777755 345565542 22 2468888884 45
Q ss_pred CC-EEEEEe-CCCcEEEEECC-Cccchheec
Q psy11350 376 GY-HLATGS-EDNAVKIWDLR-KRRLLKWCT 403 (471)
Q Consensus 376 ~~-~l~s~s-~dg~i~iwd~~-~~~~~~~~~ 403 (471)
++ +|++++ .++++.+||.. +.+.+..|.
T Consensus 242 g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 242 GKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp GCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred CCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 55 555554 67899999997 666666654
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.40 E-value=0.00043 Score=64.89 Aligned_cols=204 Identities=9% Similarity=-0.037 Sum_probs=126.8
Q ss_pred CcCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC
Q psy11350 152 TRPISYCSFSPDSQHVATAS-WSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK 230 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 230 (471)
-..+..++|++.+..|+... ..+.|..+++........+.........+++.+.+.. ++++-...+.|.+.+++.
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~----ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDK----LYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTE----EEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCe----EEEEcCCCCeEEEEcCCC
Confidence 34578999998777666554 5688999998766544444332344568889876553 455666678899999865
Q ss_pred CcceeeecCCCCcceEEEEECCCCCEEEEEeCCC--eEEe-c--c-ccccccCCCCcceEEEEECCCCCEEEEEe-cCCe
Q psy11350 231 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH--SWRL-D--T-PLANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHS 303 (471)
Q Consensus 231 ~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~--~~~~-~--~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~ 303 (471)
......+.. .......+++.|.+..++...... .+.. . . ....+....-.....|+++|++..|+.+. ..+.
T Consensus 148 ~~~~~l~~~-~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~ 226 (349)
T 3v64_C 148 AHRKVLLWQ-SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV 226 (349)
T ss_dssp CSCEEEECT-TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEEeC-CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE
Confidence 433332322 223678999999777766665443 3322 1 1 11122222233578999999777666654 4578
Q ss_pred EEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec
Q psy11350 304 WRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361 (471)
Q Consensus 304 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~ 361 (471)
|..+|+........+.........+++. .+.++++-...+.|..++..+|+.+..+.
T Consensus 227 I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 227 IERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 9999987543333333334456678873 45556666667788888866776555554
No 273
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.35 E-value=0.00043 Score=63.56 Aligned_cols=162 Identities=10% Similarity=0.024 Sum_probs=95.5
Q ss_pred ceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCC
Q psy11350 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264 (471)
Q Consensus 185 ~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~ 264 (471)
+.+..+... .....++|.+++. ++++...++.|..||.... ....+..
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~-----lyv~d~~~~~I~~~d~~g~-~~~~~~~------------------------- 70 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGT-----IFVTNHEVGEIVSITPDGN-QQIHATV------------------------- 70 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSC-----EEEEETTTTEEEEECTTCC-EEEEEEC-------------------------
T ss_pred eEeEeCCCC-CCcceEEECCCCC-----EEEEeCCCCeEEEECCCCc-eEEEEeC-------------------------
Confidence 444455432 4567899999876 5666657788888886542 2111110
Q ss_pred eEEeccccccccCCCCcceEEEEECCCCCEEEEEecC--CeEEEEECCCCcEEEEee-CCCCCeEEEEEeCCCCEEEEEe
Q psy11350 265 SWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD--HSWRLWDLNQGQEVLHQE-GHGKPVYCMSFQGDGSVVATGG 341 (471)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~t~~ 341 (471)
...+..+++.++|+++++.... ..|..+|..+++...... ........++..+++..+++..
T Consensus 71 ---------------~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~ 135 (306)
T 2p4o_A 71 ---------------EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADS 135 (306)
T ss_dssp ---------------SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEET
T ss_pred ---------------CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEEC
Confidence 1247788888888855544332 247777777776433222 1223345566556555555555
Q ss_pred CCCeEEEEeCCCCee-EEEec---------ccCcCEEEEEEcCCCCEEEE-EeCCCcEEEEECCC
Q psy11350 342 LDAFGRVWDLRTGRC-IMFLE---------GHLKSVFSVDFSPDGYHLAT-GSEDNAVKIWDLRK 395 (471)
Q Consensus 342 ~dg~i~iwd~~~~~~-~~~~~---------~h~~~v~~~~~sp~~~~l~s-~s~dg~i~iwd~~~ 395 (471)
.++.|+++|..+++. +.... ........+ +|++.+|+. -+..+.|..+++..
T Consensus 136 ~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 136 YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 688999999876532 21111 111245566 788876654 45678899999875
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.35 E-value=3.5e-05 Score=80.33 Aligned_cols=154 Identities=16% Similarity=0.097 Sum_probs=91.3
Q ss_pred CEEEEEEe-eCCCCCCccEEE-EEeCCC----cEEEEeCCCC-cceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEe
Q psy11350 196 NVGAIEFH-PLPSEGAVCSLA-SCAQDG----SVKLWSLDKD-TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268 (471)
Q Consensus 196 ~v~~l~~~-~~~~~~~~~~l~-s~~~dg----~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~ 268 (471)
.+....|+ |++. +|+ +...+| +|.++|+.++ +.+.. . +
T Consensus 175 ~~~~~~~S~PDG~-----~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~---~----~----------------------- 219 (751)
T 2xe4_A 175 DVMEVKPAPPEHD-----LVAFSVDMSGNEVYTIEFKRISDPSQTIAD---K----V----------------------- 219 (751)
T ss_dssp EEEEEEECTTTTC-----EEEEEEESSSSSCEEEEEEETTCTTCCCCC---C----E-----------------------
T ss_pred EEeeeEecCCCCC-----EEEEEEeCCCCceEEEEEEECCCCCEeCCc---c----c-----------------------
Confidence 67889999 9998 444 333333 4999999887 53210 0 0
Q ss_pred ccccccccCCCCcceEEEEECCCCCEEEEEecC-----CeEEEEECCCCcE--EEEee-CCCCCeEEEEEeCCCCEEEEE
Q psy11350 269 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD-----HSWRLWDLNQGQE--VLHQE-GHGKPVYCMSFQGDGSVVATG 340 (471)
Q Consensus 269 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~--~~~~~-~~~~~v~~~~~s~d~~~l~t~ 340 (471)
......+.|+|||+.|+....+ ..|+++++.+++. ...+. ........+.|+|||++|+..
T Consensus 220 -----------~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~ 288 (751)
T 2xe4_A 220 -----------SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIG 288 (751)
T ss_dssp -----------EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEE
T ss_pred -----------cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEE
Confidence 0012245566666655555443 3588888877642 22222 233446788999999988866
Q ss_pred eC---CCeEEEEeCCCC--ee--EEEecccCcCEEEEEEcCCCCEEEEEeCC----CcEEEEECCC
Q psy11350 341 GL---DAFGRVWDLRTG--RC--IMFLEGHLKSVFSVDFSPDGYHLATGSED----NAVKIWDLRK 395 (471)
Q Consensus 341 ~~---dg~i~iwd~~~~--~~--~~~~~~h~~~v~~~~~sp~~~~l~s~s~d----g~i~iwd~~~ 395 (471)
+. ...|+++|+.++ .. ............++.|+.++.+++....+ ..|..+|+.+
T Consensus 289 ~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 289 SQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred ecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 53 346889999875 23 22233344556666665444444444443 2567777765
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.32 E-value=0.0012 Score=63.03 Aligned_cols=189 Identities=8% Similarity=-0.091 Sum_probs=118.0
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcc---eeeecCCC
Q psy11350 165 QHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP---LANLEGHE 241 (471)
Q Consensus 165 ~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~ 241 (471)
.+|+.+. ...|+..++........+. ....+.+|+|++.... ++.+-...+.|..+++..... ...+..
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~----lywsD~~~~~I~~~~~~g~~~~~~~~~~~~-- 155 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNR----IYWSDLSQRMICSTQLDRAHGVSSYDTVIS-- 155 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTE----EEEEETTTTEEEEEEC------CCCEEEEC--
T ss_pred ceeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCc----eEEEecCCCeEEEEEcccCCCCCcceEEEe--
Confidence 3555554 5789999987765554443 3466789999987652 444545567888888754210 011100
Q ss_pred CcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCC-EEEEEecCCeEEEEECCCCcEEEEeeC
Q psy11350 242 PFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEG 320 (471)
Q Consensus 242 ~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~ 320 (471)
........+++.+.+. ++++-...+.|.+.++........+..
T Consensus 156 ------------------------------------~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~ 199 (400)
T 3p5b_L 156 ------------------------------------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE 199 (400)
T ss_dssp ------------------------------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC
T ss_pred ------------------------------------CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC
Confidence 0012467888887444 444445578899999876554444443
Q ss_pred CCCCeEEEEEeCCCCEEEEEeC--CCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEE-eCCCcEEEEECCCcc
Q psy11350 321 HGKPVYCMSFQGDGSVVATGGL--DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG-SEDNAVKIWDLRKRR 397 (471)
Q Consensus 321 ~~~~v~~~~~s~d~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~-s~dg~i~iwd~~~~~ 397 (471)
.......|++.|.+..|+.... .+.|...++........+...-.....|+++|++..|+.+ +..+.|..+|++...
T Consensus 200 ~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 200 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 279 (400)
T ss_dssp SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc
Confidence 4455789999996666655542 3789999886544333333344678999999877766655 456789999987543
No 276
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.29 E-value=0.00016 Score=69.90 Aligned_cols=230 Identities=12% Similarity=0.066 Sum_probs=132.1
Q ss_pred CeEEEEEec-CCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeC-CC----cEEEEe
Q psy11350 154 PISYCSFSP-DSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ-DG----SVKLWS 227 (471)
Q Consensus 154 ~V~~~~~s~-~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~-dg----~i~iwd 227 (471)
....++++| ++..|+++...+.|+.+|+.++...... ........|+|++++. .|+.+.. ++ .+.+.+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~-----~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEAD-----SMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSS-----EEEEEECCSCTTSEEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCC-----EEEEEeCCCCcccceEEEEe
Confidence 457889998 4666776665588999998776544433 3455678999999987 4555543 22 233334
Q ss_pred CCCCcce--eeecCCCCcceEEEEECC-CCCEEEEEeCCCeEEeccc---cc-cc-cCCCCcceEEEEECCCCCEEEEE-
Q psy11350 228 LDKDTPL--ANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLDTP---LA-NL-EGHEPFRVSRIKFHPSGRFLGTC- 298 (471)
Q Consensus 228 ~~~~~~~--~~~~~~~~~~v~~~~~s~-~~~~i~~~~~d~~~~~~~~---~~-~~-~~~~~~~v~~l~~~~~~~~l~~~- 298 (471)
. .+... ..+.. ......++++| +|..+++-...+.+....+ .. .+ ..........++|+|++++|+.+
T Consensus 212 ~-~g~~~~~~~l~~--~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 212 R-ESGFKVITELTK--GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp G-GGTSCSEEEEEE--CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred C-CCceeeeeeecc--CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 2 33222 12221 12467788999 5555555444454333211 11 11 11112246789999999965555
Q ss_pred ecCCeEEEEECCC--CcE--EEEeeCC---------------CCCeE-EEEEe--------CCCCEEEEEeCCCeEEEEe
Q psy11350 299 CWDHSWRLWDLNQ--GQE--VLHQEGH---------------GKPVY-CMSFQ--------GDGSVVATGGLDAFGRVWD 350 (471)
Q Consensus 299 ~~dg~i~iwd~~~--~~~--~~~~~~~---------------~~~v~-~~~~s--------~d~~~l~t~~~dg~i~iwd 350 (471)
...+.|..++... +.. +..+.+. -.... .++.. ++|.++++-...+.|+.++
T Consensus 289 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~ 368 (430)
T 3tc9_A 289 VNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT 368 (430)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC
T ss_pred CCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC
Confidence 4567899987653 221 1122111 01122 45553 3466666666678899998
Q ss_pred CCCCeeEEEeccc------------------CcCEEEEEEcC-CCCEEEEEeCCCcEEEEECC
Q psy11350 351 LRTGRCIMFLEGH------------------LKSVFSVDFSP-DGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 351 ~~~~~~~~~~~~h------------------~~~v~~~~~sp-~~~~l~s~s~dg~i~iwd~~ 394 (471)
.+|... ++.+. -.....|+++| ++.++++-..++.|+.++++
T Consensus 369 -~~G~v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 369 -PQGRVT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp -TTSEEE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred -CCCcEE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 456433 32221 12588999999 46666666667778887754
No 277
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.29 E-value=0.0024 Score=59.10 Aligned_cols=236 Identities=11% Similarity=0.003 Sum_probs=132.2
Q ss_pred CcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEee----cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe
Q psy11350 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR----GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~----~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 227 (471)
...+.++.|.+++..+++| ..|.|. .....|+.-.... .....+.+|.|.+ +. ++.++..+.|.. .
T Consensus 35 ~~~~~~v~~~~~~~~~~~G-~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~------~~~~g~~g~i~~-S 104 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG-VNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE------GWIVGEPPIMLH-T 104 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE-TTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TE------EEEEEETTEEEE-E
T ss_pred CCcEEEEEECCCCcEEEEc-CCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce------EEEEECCCeEEE-E
Confidence 4579999998877777754 477653 3334443222221 1244688999976 32 334455665543 3
Q ss_pred CCCCcceeeecCC--CCcceEEEEECCCCCEEEEEeCCCeEEeccccc---cccCCCCcceEEEEECCCCCEEEEEecCC
Q psy11350 228 LDKDTPLANLEGH--EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA---NLEGHEPFRVSRIKFHPSGRFLGTCCWDH 302 (471)
Q Consensus 228 ~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~---~~~~~~~~~v~~l~~~~~~~~l~~~~~dg 302 (471)
.+.++.-...... .+..+..+.+.+++..++++...+.++....-. .........+..+.+.|++.+++++...+
T Consensus 105 ~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~ 184 (327)
T 2xbg_A 105 TDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGS 184 (327)
T ss_dssp SSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSS
T ss_pred CCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCc
Confidence 3334432322211 112467777777776666554333333322111 11111233688999999988887765444
Q ss_pred eEEEEEC--CCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec-c---cCcCEEEEEEcCCC
Q psy11350 303 SWRLWDL--NQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE-G---HLKSVFSVDFSPDG 376 (471)
Q Consensus 303 ~i~iwd~--~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~-~---h~~~v~~~~~sp~~ 376 (471)
.++-.|- .+.+.+. ......+..+.+.+++.++++ +.+|.+++++...++.-..+. + +...+.++++.+++
T Consensus 185 ~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~ 261 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPN 261 (327)
T ss_dssp EEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSS
T ss_pred EEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCC
Confidence 4444453 3333332 244567889999999876654 467888777433343322222 1 22458999999887
Q ss_pred CEEEEEeCCCcEEEEECCCccchhee
Q psy11350 377 YHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 377 ~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
..++++ .+|.| ++..+.++.-..+
T Consensus 262 ~~~~~g-~~g~i-~~S~DgG~tW~~~ 285 (327)
T 2xbg_A 262 EVWLAG-GAGAL-LCSQDGGQTWQQD 285 (327)
T ss_dssp CEEEEE-STTCE-EEESSTTSSCEEC
T ss_pred EEEEEe-CCCeE-EEeCCCCcccEEc
Confidence 776665 46776 4566666544433
No 278
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.29 E-value=0.00013 Score=67.68 Aligned_cols=200 Identities=14% Similarity=0.025 Sum_probs=121.2
Q ss_pred EEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCC-------------------CCcceEEEEECC-CCCE
Q psy11350 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH-------------------EPFRVSRIKFHP-SGRF 256 (471)
Q Consensus 197 v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------------~~~~v~~~~~s~-~~~~ 256 (471)
..+++|.+++. +++++..++.|..|+..++... .+... ....+..+++.+ ++++
T Consensus 21 p~~i~~d~~g~-----~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l 94 (322)
T 2fp8_A 21 PNSFTFDSTNK-----GFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQL 94 (322)
T ss_dssp CCCEECCTTCS-----SEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEE
T ss_pred ceEEEEcCCCC-----EEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcE
Confidence 45788888876 5788888899999998665432 22100 012478899998 5554
Q ss_pred EEEEeCCCeEEeccc---cccccC----CCCcceEEEEECC-CCCEEEEEec-----------------CCeEEEEECCC
Q psy11350 257 LGTCCWDHSWRLDTP---LANLEG----HEPFRVSRIKFHP-SGRFLGTCCW-----------------DHSWRLWDLNQ 311 (471)
Q Consensus 257 i~~~~~d~~~~~~~~---~~~~~~----~~~~~v~~l~~~~-~~~~l~~~~~-----------------dg~i~iwd~~~ 311 (471)
+++....+.+.+... ...+.. ........+++.+ +|+..++-.. ++.|..||..+
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 444333333333211 111111 1112467899999 8876665432 36799999877
Q ss_pred CcEEEEeeCCCCCeEEEEEeCCCCEEEEE-eCCCeEEEEeCCCCe--eEEEecccCcCEEEEEEcCCCCEEEEEeC----
Q psy11350 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATG-GLDAFGRVWDLRTGR--CIMFLEGHLKSVFSVDFSPDGYHLATGSE---- 384 (471)
Q Consensus 312 ~~~~~~~~~~~~~v~~~~~s~d~~~l~t~-~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s~s~---- 384 (471)
++....... ......++|+|+++.|+.+ ...+.|.+|++.... ....+....+ ...+++.++|+++++...
T Consensus 175 ~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 175 KETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp TEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred CEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccc
Confidence 654322221 1234579999999866555 556899999987421 1111111223 788999999987776654
Q ss_pred ------CCcEEEEECCCccchheeccc
Q psy11350 385 ------DNAVKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 385 ------dg~i~iwd~~~~~~~~~~~~~ 405 (471)
.+.|..+|. .++.+..+...
T Consensus 253 ~~~~~~~~~v~~~d~-~G~~~~~~~~~ 278 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDE-FGNILEVIPLP 278 (322)
T ss_dssp STTSCEEEEEEEECT-TSCEEEEEECC
T ss_pred cccCCCccEEEEECC-CCCEEEEEECC
Confidence 466888886 46666655443
No 279
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.27 E-value=0.00018 Score=63.68 Aligned_cols=168 Identities=9% Similarity=0.070 Sum_probs=102.8
Q ss_pred EeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEe
Q psy11350 189 TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268 (471)
Q Consensus 189 ~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~ 268 (471)
.+.+-...+..++|.|++.. ++++...++.|...|.. ++.+..+.....
T Consensus 21 ~l~g~~~~lSGla~~~~~~~----L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-------------------------- 69 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNT----LFSTINKPAAIVEMTTN-GDLIRTIPLDFV-------------------------- 69 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTE----EEEEEETTEEEEEEETT-CCEEEEEECSSC--------------------------
T ss_pred ECCCcccCcceeEEeCCCCE----EEEEECCCCeEEEEeCC-CCEEEEEecCCC--------------------------
Confidence 34455578999999998653 55567778889999986 766665532211
Q ss_pred ccccccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcE---EEEee------CCCCCeEEEEEeCCCCEEEE
Q psy11350 269 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE---VLHQE------GHGKPVYCMSFQGDGSVVAT 339 (471)
Q Consensus 269 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~------~~~~~v~~~~~s~d~~~l~t 339 (471)
...-.|++.+++.++++.-.++.+.++++..... +.... ........++|+|.++.|++
T Consensus 70 ------------~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~v 137 (255)
T 3qqz_A 70 ------------KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWF 137 (255)
T ss_dssp ------------SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEE
T ss_pred ------------CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEE
Confidence 1356677777776555555566777777654432 11111 23445789999998876666
Q ss_pred EeCCCeEEEEeCC---CCeeEEEec-------ccCcCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCccchh
Q psy11350 340 GGLDAFGRVWDLR---TGRCIMFLE-------GHLKSVFSVDFSPDG-YHLATGSEDNAVKIWDLRKRRLLK 400 (471)
Q Consensus 340 ~~~dg~i~iwd~~---~~~~~~~~~-------~h~~~v~~~~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~ 400 (471)
+.......||.+. ....+..+. .+...+.+++++|.. ++++.......|.++|.. ++.+.
T Consensus 138 a~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~ 208 (255)
T 3qqz_A 138 FKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIG 208 (255)
T ss_dssp EEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEE
T ss_pred EECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEE
Confidence 6654444444443 111122221 133467899999964 455555566778888865 55544
No 280
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.27 E-value=0.0012 Score=61.19 Aligned_cols=228 Identities=10% Similarity=0.025 Sum_probs=129.2
Q ss_pred CcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEee---cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeC
Q psy11350 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR---GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL 228 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 228 (471)
...+.++.|++ +..++ ++..|.|.. ....|+.-.... .+...+..|.+.+++. +++ ++.+|.|.. ..
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~-----~~~-~~~~g~v~~-S~ 148 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGS-----AEM-ITNVGAIYR-TK 148 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTE-----EEE-EETTCCEEE-ES
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCC-----EEE-EeCCccEEE-Ec
Confidence 44688899986 44444 444665544 333344333222 2335577888877664 344 445665432 22
Q ss_pred CCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc----cccccCCCCcceEEEEECCCCCEEEEEecCCeE
Q psy11350 229 DKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304 (471)
Q Consensus 229 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i 304 (471)
+.++.-..........+..+.+.+++.+++++.....+..... -..+.......+..+.+.+++..+ .++.+|.+
T Consensus 149 DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~~ 227 (327)
T 2xbg_A 149 DSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLW-MIVNGGKI 227 (327)
T ss_dssp STTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEE-EEETTTEE
T ss_pred CCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEE-EEeCCceE
Confidence 3344333333222336889999999988877654443333211 011111123468899999988755 45567888
Q ss_pred EEEECCCCcEEEEee-C---CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec---ccCcCEEEEEEcCCCC
Q psy11350 305 RLWDLNQGQEVLHQE-G---HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE---GHLKSVFSVDFSPDGY 377 (471)
Q Consensus 305 ~iwd~~~~~~~~~~~-~---~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~~~~sp~~~ 377 (471)
++.+...++.-..+. + +...+.++.+.+++.+++++. +|.| .+..+.|+.-..+. .+...+.++.|.+++
T Consensus 228 ~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~- 304 (327)
T 2xbg_A 228 AFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD- 304 (327)
T ss_dssp EEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-
T ss_pred EEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-
Confidence 777533233222222 1 234588999998887776654 6766 34445554444343 223567889887554
Q ss_pred EEEEEeCCCcEEEEEC
Q psy11350 378 HLATGSEDNAVKIWDL 393 (471)
Q Consensus 378 ~l~s~s~dg~i~iwd~ 393 (471)
.+++++.+|.|.-++-
T Consensus 305 ~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 305 QGFILGQKGILLRYVT 320 (327)
T ss_dssp EEEEECSTTEEEEECC
T ss_pred ceEEEcCCceEEEEcC
Confidence 4666678898776653
No 281
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.27 E-value=0.00038 Score=66.23 Aligned_cols=215 Identities=9% Similarity=-0.032 Sum_probs=131.0
Q ss_pred CcCeEEEEEecCCCEEEEE-eCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC
Q psy11350 152 TRPISYCSFSPDSQHVATA-SWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK 230 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 230 (471)
...+..++|++.+..|+.. ...+.|..+++........+.........+++.+.+.. ++++-...+.|.+.+++.
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~----lY~~d~~~~~I~~~~~dg 190 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDK----LYWTDSGTSRIEVANLDG 190 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTE----EEEEETTTTEEEECBTTS
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCe----EEEEcCCCCeEEEEeCCC
Confidence 3457889999876666654 45688999998766544444333334567888876553 455556678898888864
Q ss_pred CcceeeecCCCCcceEEEEECCCCCEEEEEeCCC--eEE-ec--c-ccccccCCCCcceEEEEECCCCCEEEEEe-cCCe
Q psy11350 231 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH--SWR-LD--T-PLANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHS 303 (471)
Q Consensus 231 ~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~--~~~-~~--~-~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~ 303 (471)
......+.. .......+++.|.+..++...... .+. +. . ....+....-.....|+|+|++..|+.+. ..+.
T Consensus 191 ~~~~~l~~~-~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~ 269 (386)
T 3v65_B 191 AHRKVLLWQ-SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV 269 (386)
T ss_dssp CSCEEEECS-SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE
T ss_pred CceEEeecC-CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE
Confidence 433333322 223678999999887776665443 322 21 1 11122112123478999998777666654 4578
Q ss_pred EEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEE
Q psy11350 304 WRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372 (471)
Q Consensus 304 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 372 (471)
|..+|+........+.........+++. .+.++++....+.|..++..+|+.+..+.........|++
T Consensus 270 I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 270 IERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp EEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred EEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 9999987543333333334456778883 4556666667788888887777666655433333344433
No 282
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.25 E-value=0.00011 Score=73.88 Aligned_cols=217 Identities=13% Similarity=0.079 Sum_probs=120.5
Q ss_pred EEEEecCCCEEEEEeC--------------------C----CcEEEEeCCCCceEEEeec--CC--------CCEEEEEE
Q psy11350 157 YCSFSPDSQHVATASW--------------------S----GLCKLWTVPECELVQTFRG--HD--------CNVGAIEF 202 (471)
Q Consensus 157 ~~~~s~~~~~l~tg~~--------------------d----g~i~iwd~~~~~~~~~~~~--h~--------~~v~~l~~ 202 (471)
.+++.|+..+|+.++. | +.|.-+|..+|+.+..++. |. .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 4677888888887763 2 5899999999999988763 32 1221 121
Q ss_pred e-eCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCc-ceE----------------------------------
Q psy11350 203 H-PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPF-RVS---------------------------------- 246 (471)
Q Consensus 203 ~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~---------------------------------- 246 (471)
. .++. ...+++.++.+|.+.++|..+|+.+..+...... ...
T Consensus 329 ~~~~G~--~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P 406 (582)
T 1flg_A 329 KAKDGK--IVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSP 406 (582)
T ss_dssp ECSSSC--EEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESS
T ss_pred ecCCCC--EEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECc
Confidence 1 2332 0115788999999999999999988765543210 011
Q ss_pred ---------EEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEE
Q psy11350 247 ---------RIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH 317 (471)
Q Consensus 247 ---------~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 317 (471)
.++++|+...+++...+..+.+..............-..+...|.+ ...+|.|..||+.+++.+..
T Consensus 407 ~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~-----~~~~G~l~A~D~~tG~~~W~ 481 (582)
T 1flg_A 407 PFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMY-----DDHVGSLRAMDPVSGKVVWE 481 (582)
T ss_dssp CTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESC-----SSCSEEEEEECTTTCCEEEE
T ss_pred CCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCC-----CCCcceEEEEECCCCCEEEE
Confidence 2233343333333332222111110000000000000001111110 12368899999999998766
Q ss_pred eeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCE-EEEEEcCCCC-EEEEE
Q psy11350 318 QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSV-FSVDFSPDGY-HLATG 382 (471)
Q Consensus 318 ~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~~~~sp~~~-~l~s~ 382 (471)
..... ++..-.....+.+++.|+.|+.++.||.++|+.+..+....+.. .-+.|..+|+ |+++.
T Consensus 482 ~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 482 HKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp EEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred ecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 64322 22221222246688889999999999999999998887543221 1255656776 44433
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.23 E-value=0.0014 Score=68.10 Aligned_cols=211 Identities=10% Similarity=-0.075 Sum_probs=128.2
Q ss_pred CCcCeEEEEEecCCCEEEEE-eCCCcEEEEeCCCC----ceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEE
Q psy11350 151 DTRPISYCSFSPDSQHVATA-SWSGLCKLWTVPEC----ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL 225 (471)
Q Consensus 151 h~~~V~~~~~s~~~~~l~tg-~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 225 (471)
....+.+++|++....|+.+ ...+.|+.+++... .....+.........|++.+.+.+ ++++-...+.|.+
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~----LY~tD~~~~~I~v 497 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN----IYWTDSVLGTVSV 497 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTE----EEEEETTTTEEEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCc----EEEEecCCCeEEE
Confidence 34567789999866666544 45578888888642 223333323345567888877653 5556666788888
Q ss_pred EeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEec--CCe
Q psy11350 226 WSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW--DHS 303 (471)
Q Consensus 226 wd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~ 303 (471)
.++.... ...+.... ......|++.|.+.+|+.+.. .+.
T Consensus 498 ~~ldG~~-~~~l~~~~--------------------------------------l~~P~gIaVDp~~g~LYwtD~g~~~~ 538 (791)
T 3m0c_C 498 ADTKGVK-RKTLFREN--------------------------------------GSKPRAIVVDPVHGFMYWTDWGTPAK 538 (791)
T ss_dssp EETTSSS-EEEEEECT--------------------------------------TCCEEEEEEETTTTEEEEEECSSSCE
T ss_pred EeCCCCe-EEEEEeCC--------------------------------------CCCcceEEEecCCCCEEEecCCCCCe
Confidence 8875332 22211100 123678888887666665553 267
Q ss_pred EEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCCCeeEEEecc--cCcCEEEEEEcCCCCEEE
Q psy11350 304 WRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTGRCIMFLEG--HLKSVFSVDFSPDGYHLA 380 (471)
Q Consensus 304 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~--h~~~v~~~~~sp~~~~l~ 380 (471)
|.+.++........+...-.....|++++.+..|+.+. ..+.|..+++........+.. .-....+|++.. +++++
T Consensus 539 I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYw 617 (791)
T 3m0c_C 539 IKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFW 617 (791)
T ss_dssp EEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEE
T ss_pred EEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEE
Confidence 88888865443333333345678999998666666554 556899999865443333332 223466777743 34555
Q ss_pred EEeCCCcEEEEECCCccchheeccc
Q psy11350 381 TGSEDNAVKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 381 s~s~dg~i~iwd~~~~~~~~~~~~~ 405 (471)
+-...+.|...|..+++.+..+...
T Consensus 618 tD~~~~~I~~~dk~tG~~~~~l~~~ 642 (791)
T 3m0c_C 618 TDIINEAIFSANRLTGSDVNLLAEN 642 (791)
T ss_dssp EETTTTEEEEEETTTCCCCEEEECS
T ss_pred EECCCCEEEEEeCCCCcceEEeecC
Confidence 5556688888898888777666443
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.21 E-value=0.0008 Score=65.01 Aligned_cols=231 Identities=13% Similarity=0.043 Sum_probs=134.0
Q ss_pred CeEEEEEecC--CCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCC---Cc-EEEEe
Q psy11350 154 PISYCSFSPD--SQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD---GS-VKLWS 227 (471)
Q Consensus 154 ~V~~~~~s~~--~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d---g~-i~iwd 227 (471)
....++|+|+ +..|+.+...+.|+.+++.++...... ........|+|++++. ++++.... .. +...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-----lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-----MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-----EEEEECCSCTTSEEEEEEC
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-----EEEEcCCCCcccceEEEEE
Confidence 4568899994 455666654589999998877665543 3445688999999987 44444321 11 33333
Q ss_pred CCCCcce-eeecCCCCcceEEEEECC-CCCEEEEEeCCCeEEecccc-c----cc-cCCCCcceEEEEECCCCCEEEEEe
Q psy11350 228 LDKDTPL-ANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLDTPL-A----NL-EGHEPFRVSRIKFHPSGRFLGTCC 299 (471)
Q Consensus 228 ~~~~~~~-~~~~~~~~~~v~~~~~s~-~~~~i~~~~~d~~~~~~~~~-~----~~-~~~~~~~v~~l~~~~~~~~l~~~~ 299 (471)
...+... ..+. .......++++| +|.++++-..++.+....+. . .+ ..........++|+|++++|+++.
T Consensus 214 ~~~~~~~~~~~~--~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 214 RASGFTERLSLC--NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp GGGTTCCEEEEE--ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCCeecccccc--ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 2211110 1111 112456788999 55555454445543332211 1 11 111111234699999999666554
Q ss_pred -cCCeEEEEECCC--CcE--EEEeeCC---------------CCCeEEEEE---------eCCCCEEEEEeCCCeEEEEe
Q psy11350 300 -WDHSWRLWDLNQ--GQE--VLHQEGH---------------GKPVYCMSF---------QGDGSVVATGGLDAFGRVWD 350 (471)
Q Consensus 300 -~dg~i~iwd~~~--~~~--~~~~~~~---------------~~~v~~~~~---------s~d~~~l~t~~~dg~i~iwd 350 (471)
..+.|+.+++.. +.. ...+.+. -.....+++ .++|.++++-...+.|+.++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 567899988652 321 1122111 123567899 67777777777788999998
Q ss_pred CCCCeeEEEeccc------------------CcCEEEEEEc-CCCCEEEEEeCCCcEEEEECC
Q psy11350 351 LRTGRCIMFLEGH------------------LKSVFSVDFS-PDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 351 ~~~~~~~~~~~~h------------------~~~v~~~~~s-p~~~~l~s~s~dg~i~iwd~~ 394 (471)
. +|... ++.+. -.....|+++ ++|.++++=..++.|+.++++
T Consensus 372 ~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 372 P-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp T-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred C-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 5 56433 33221 1247889999 566666666667788887764
No 285
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.06 E-value=0.0055 Score=55.85 Aligned_cols=211 Identities=10% Similarity=0.080 Sum_probs=118.1
Q ss_pred CcCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceEEEeecC-----C--CCEEEEEE---eeCCCCCCccEEEEEe--
Q psy11350 152 TRPISYCSFSPDSQHVATAS-WSGLCKLWTVPECELVQTFRGH-----D--CNVGAIEF---HPLPSEGAVCSLASCA-- 218 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~-~dg~i~iwd~~~~~~~~~~~~h-----~--~~v~~l~~---~~~~~~~~~~~l~s~~-- 218 (471)
..--.+++|.+....|..++ ..|+|..|+...+......-.. . ..+..|.| .|.+. ++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr-----L~vv~~~~ 86 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR-----LFAVMKNA 86 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE-----EEEEEEET
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc-----EEEEEccc
Confidence 33445778988766666666 7899999998766444332221 1 13578999 57754 444333
Q ss_pred -----------CCCcEEEEeCC---CCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceE
Q psy11350 219 -----------QDGSVKLWSLD---KDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVS 284 (471)
Q Consensus 219 -----------~dg~i~iwd~~---~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~ 284 (471)
.+..|..+|+. +++.+......... .......+.......
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~--------------------------~~~~~~~g~~~~~~n 140 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQ--------------------------DEFEKKAGKRPFGVV 140 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHH--------------------------HHHHHHHSSCCEEEE
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccc--------------------------ccccccccccccCCc
Confidence 25778889988 67655443311000 000000010112355
Q ss_pred EEEECCCCCEEEEEecC-CeEEEEECCCCcEEEEe------eCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCee-
Q psy11350 285 RIKFHPSGRFLGTCCWD-HSWRLWDLNQGQEVLHQ------EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC- 356 (471)
Q Consensus 285 ~l~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~------~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~- 356 (471)
.++..++|+..++++.. +.|..++.... .+..+ .......+.|+++|+|.+|++....|.+..+|+.+...
T Consensus 141 DvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~ 219 (334)
T 2p9w_A 141 QSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAW 219 (334)
T ss_dssp EEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCC
T ss_pred eeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcce
Confidence 66666666666666665 66555555432 12111 11223467899999999888887799999999885432
Q ss_pred -EEEec--cc---CcCEEEE-EEcCCCCE-EEEEeCCCcEEEEECCC
Q psy11350 357 -IMFLE--GH---LKSVFSV-DFSPDGYH-LATGSEDNAVKIWDLRK 395 (471)
Q Consensus 357 -~~~~~--~h---~~~v~~~-~~sp~~~~-l~s~s~dg~i~iwd~~~ 395 (471)
+. +. +. -.....| ..-.+|+. |++.+..+.+.+.+-+.
T Consensus 220 ~v~-~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 220 PEP-VKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp CEE-CEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred eec-ccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 21 11 21 1223443 22236777 55555666666665543
No 286
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.05 E-value=2.8e-05 Score=80.03 Aligned_cols=209 Identities=10% Similarity=-0.059 Sum_probs=117.9
Q ss_pred cCeEEEEEecCCCEEEEEe-CCCcEEEEeCCC----CceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe
Q psy11350 153 RPISYCSFSPDSQHVATAS-WSGLCKLWTVPE----CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~-~dg~i~iwd~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 227 (471)
..+..++|++.+..|+.+. ..+.|+.+++.+ ......+.........|++.+.+.. ++++-...+.|.+++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~----LY~tD~~~~~I~v~d 481 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN----IYWTDSVLGTVSVAD 481 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSB----CEECCTTTSCEEEEB
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCc----EEEEeccCCeEEEEe
Confidence 4566789998877776654 457899999875 2222222111122345677654442 344445567788888
Q ss_pred CCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEec--CCeEE
Q psy11350 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW--DHSWR 305 (471)
Q Consensus 228 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~ 305 (471)
+........+... ......|+++|.+.+|+.+.. .+.|.
T Consensus 482 ~dg~~~~~l~~~~---------------------------------------~~~P~giavDp~~g~ly~td~~~~~~I~ 522 (699)
T 1n7d_A 482 TKGVKRKTLFREQ---------------------------------------GSKPRAIVVDPVHGFMYWTDWGTPAKIK 522 (699)
T ss_dssp SSSCCEEEECCCS---------------------------------------SCCCCCEECCSSSSCCEECCCSSSCCEE
T ss_pred cCCCceEEEEeCC---------------------------------------CCCcceEEEccCCCcEEEcccCCCCeEE
Confidence 7543221111110 112456677776555544432 26777
Q ss_pred EEECCCCcEEEEeeCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEeCCCCeeEEEec--ccCcCEEEEEEcCCCCEEEEE
Q psy11350 306 LWDLNQGQEVLHQEGHGKPVYCMSFQGDGS-VVATGGLDAFGRVWDLRTGRCIMFLE--GHLKSVFSVDFSPDGYHLATG 382 (471)
Q Consensus 306 iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~t~~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~s~ 382 (471)
++++............-...+.|+|+|++. ++++-+..+.|.++++........+. .......+|++..+ .++++.
T Consensus 523 ~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd 601 (699)
T 1n7d_A 523 KGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTD 601 (699)
T ss_dssp BCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEEC
T ss_pred EEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEe
Confidence 777653322111122223456899998755 44555567789999986443322222 12234556666544 455566
Q ss_pred eCCCcEEEEECCCccchheeccc
Q psy11350 383 SEDNAVKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 383 s~dg~i~iwd~~~~~~~~~~~~~ 405 (471)
...+.|..++..+++.+..+...
T Consensus 602 ~~~~~V~~~d~~~G~~~~~i~~~ 624 (699)
T 1n7d_A 602 IINEAIFSANRLTGSDVNLLAEN 624 (699)
T ss_dssp STTTCEEEEETTTEEEEECCCTT
T ss_pred CCCCeEEEEEccCCCceEEeecC
Confidence 67789999999888887777543
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.04 E-value=0.0024 Score=58.85 Aligned_cols=204 Identities=10% Similarity=-0.050 Sum_probs=123.8
Q ss_pred cCeEEEEEecCCCEEEEE-eCCCcEEEEeCCCCce-EEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC
Q psy11350 153 RPISYCSFSPDSQHVATA-SWSGLCKLWTVPECEL-VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK 230 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg-~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 230 (471)
..+.+++|++.+..|+.. ...+.|..+++..+.. ...+...-.....+++.+.+.. ++++-...+.|.+++++.
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~----ly~~d~~~~~I~~~~~dG 110 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEK----LYWTDSETNRIEVSNLDG 110 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTE----EEEEETTTTEEEEEETTS
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCe----EEEEECCCCEEEEEECCC
Confidence 356788999876666544 4568899999876532 1222222234567888875553 455556678999999864
Q ss_pred CcceeeecCCCCcceEEEEECCCCCEEEEEeC--CCeEEe-c---cccccccCCCCcceEEEEECCCCCEEEEEe-cCCe
Q psy11350 231 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW--DHSWRL-D---TPLANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHS 303 (471)
Q Consensus 231 ~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~--d~~~~~-~---~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~ 303 (471)
... ..+..........+++.|.+.+++.... .+.+.. . .....+....-.....|+++|++..|+.+. ..+.
T Consensus 111 ~~~-~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~ 189 (318)
T 3sov_A 111 SLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF 189 (318)
T ss_dssp CSC-EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CcE-EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCE
Confidence 433 3332222236789999998777666653 233322 1 111122111123468999999777666664 4678
Q ss_pred EEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecc
Q psy11350 304 WRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362 (471)
Q Consensus 304 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~ 362 (471)
|..+|+..........+.......+++.. +.++.+-...+.|..++..+|+....+..
T Consensus 190 I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 190 IHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp EEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 99999875433222333344556777763 34555655678899999888876555543
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.03 E-value=0.0057 Score=59.47 Aligned_cols=238 Identities=11% Similarity=0.059 Sum_probs=136.8
Q ss_pred CeEEEEEec-CCCEEEEEe-CCCcEEEEeCCCCceEEEeecC---CCCEEEEEE-------eeCCCCCCccEEEEEeCCC
Q psy11350 154 PISYCSFSP-DSQHVATAS-WSGLCKLWTVPECELVQTFRGH---DCNVGAIEF-------HPLPSEGAVCSLASCAQDG 221 (471)
Q Consensus 154 ~V~~~~~s~-~~~~l~tg~-~dg~i~iwd~~~~~~~~~~~~h---~~~v~~l~~-------~~~~~~~~~~~l~s~~~dg 221 (471)
....|+|+| ++..|+.+. ..+.|++.|+.++.....+... ......|+| ++++. .|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~-----~lyvad~~~ 214 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAE-----YMIVAIDYD 214 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTC-----EEEEEECCC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCC-----EEEEEeCCC
Confidence 467889998 455555554 3467999998876665544332 235789999 99887 455555443
Q ss_pred -------cEEEEeCCC-Ccce-----eeecCCCCcceEEEEECCCCCEEEE-EeCCCeEEecccc--------cc-----
Q psy11350 222 -------SVKLWSLDK-DTPL-----ANLEGHEPFRVSRIKFHPSGRFLGT-CCWDHSWRLDTPL--------AN----- 274 (471)
Q Consensus 222 -------~i~iwd~~~-~~~~-----~~~~~~~~~~v~~~~~s~~~~~i~~-~~~d~~~~~~~~~--------~~----- 274 (471)
.|.+.+... +... ..+.. ......++++|++.+|++ -...+.+...... ..
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~--~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~ 292 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIAA--YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI 292 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEEE--ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCB
T ss_pred CCcccCceEEEEecCCCCceeecccceeecc--CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccc
Confidence 255665333 2221 12221 114567889996655554 4455543221111 11
Q ss_pred -----------ccCCCCcceEEEEECCCCCEEEEE-ecCCeEEEEECC--CCcE--EEEeeCC---C------------C
Q psy11350 275 -----------LEGHEPFRVSRIKFHPSGRFLGTC-CWDHSWRLWDLN--QGQE--VLHQEGH---G------------K 323 (471)
Q Consensus 275 -----------~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~iwd~~--~~~~--~~~~~~~---~------------~ 323 (471)
+..........|+|+|+|++|+.+ +..+.|+.++.. .+.. ...+-+. . .
T Consensus 293 ~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~ 372 (496)
T 3kya_A 293 VKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMN 372 (496)
T ss_dssp GGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCS
T ss_pred ccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccC
Confidence 111112346789999999965555 456789886653 3321 0122111 1 1
Q ss_pred CeE-EEEEe-------CCCCEEEEEeCCCeEEEEeCCCCeeEEEeccc------------------------CcCEEEEE
Q psy11350 324 PVY-CMSFQ-------GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH------------------------LKSVFSVD 371 (471)
Q Consensus 324 ~v~-~~~~s-------~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h------------------------~~~v~~~~ 371 (471)
... .++.. ++|.++++-...++|+.++ .+|. +.++-+. -.....|+
T Consensus 373 ~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIa 450 (496)
T 3kya_A 373 NPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLV 450 (496)
T ss_dssp SEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEE
T ss_pred CCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEE
Confidence 233 44554 4667777777788999998 4563 3344321 12477899
Q ss_pred EcCC-CCEEEEEeCCCcEEEEECCCccchh
Q psy11350 372 FSPD-GYHLATGSEDNAVKIWDLRKRRLLK 400 (471)
Q Consensus 372 ~sp~-~~~l~s~s~dg~i~iwd~~~~~~~~ 400 (471)
++++ |.++++=+.+..|+.+++....++.
T Consensus 451 vd~~~g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 451 YDDVKEMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECCCC---
T ss_pred EECCCCEEEEEeCCCCEEEEEECCCCcccc
Confidence 9986 7666666677889999988766554
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.02 E-value=0.0014 Score=63.24 Aligned_cols=192 Identities=11% Similarity=0.069 Sum_probs=115.7
Q ss_pred CEEEEEEeeC--CCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCC-----CeEEe
Q psy11350 196 NVGAIEFHPL--PSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD-----HSWRL 268 (471)
Q Consensus 196 ~v~~l~~~~~--~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d-----~~~~~ 268 (471)
....|+|.|+ .. .|+.+...+.|+.+|+.++....... .......++++++|+++++.... +.+.+
T Consensus 140 ~P~gvavd~~s~~g-----~Lyv~D~~~~I~~id~~~g~v~~~~~--~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 140 NIWRMMFDPNSNYD-----DLYWVGQRDAFRHVDFVNQYVDIKTT--NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp CCCEEEECTTTTTC-----EEEEECBTSCEEEEETTTTEEEEECC--CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEE
T ss_pred CCceEEEccccCCC-----EEEEEeCCCCEEEEECCCCEEEEeec--CCCCccEEEECCCCCEEEEcCCCCcccceEEEE
Confidence 3458899984 33 35555554889999987765544333 22368999999999944443321 12222
Q ss_pred cccccccc-----CCCCcceEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEe-e-CCCCCeEEEEEeCCCCEEE-E
Q psy11350 269 DTPLANLE-----GHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLWDLNQGQEVLHQ-E-GHGKPVYCMSFQGDGSVVA-T 339 (471)
Q Consensus 269 ~~~~~~~~-----~~~~~~v~~l~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~-~~~~~v~~~~~s~d~~~l~-t 339 (471)
... ..+. .. ......++++| ++.++++-..++.|+.+|..++.....+ . +....-..++|+|+++.|+ +
T Consensus 213 ~~~-~~~~~~~~~~~-~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 213 TRA-SGFTERLSLCN-ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp CGG-GTTCCEEEEEE-CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred ECC-CCeeccccccc-cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 111 0010 01 12356788999 6665555556788999999877652222 1 1122234799999998554 4
Q ss_pred EeCCCeEEEEeCC--CCee--EEEeccc---------------CcCEEEEEE---------cCCCCEEEEEeCCCcEEEE
Q psy11350 340 GGLDAFGRVWDLR--TGRC--IMFLEGH---------------LKSVFSVDF---------SPDGYHLATGSEDNAVKIW 391 (471)
Q Consensus 340 ~~~dg~i~iwd~~--~~~~--~~~~~~h---------------~~~v~~~~~---------sp~~~~l~s~s~dg~i~iw 391 (471)
-...+.|+.++.. ++.. ...+.+. -.....+++ .++|.++++-...+.|+.+
T Consensus 291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~ 370 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVL 370 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEE
T ss_pred eCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEE
Confidence 4567889998865 3321 1122111 124678999 6777777777777889888
Q ss_pred ECCCcc
Q psy11350 392 DLRKRR 397 (471)
Q Consensus 392 d~~~~~ 397 (471)
+. .+.
T Consensus 371 ~~-~G~ 375 (433)
T 4hw6_A 371 TP-EGR 375 (433)
T ss_dssp CT-TSE
T ss_pred CC-CCC
Confidence 84 453
No 290
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.00 E-value=0.0037 Score=58.52 Aligned_cols=220 Identities=17% Similarity=0.144 Sum_probs=118.5
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceE--EEee---cCCCCEEEEEEeeC---CCCCCccEEEEEeCC----
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELV--QTFR---GHDCNVGAIEFHPL---PSEGAVCSLASCAQD---- 220 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~--~~~~---~h~~~v~~l~~~~~---~~~~~~~~l~s~~~d---- 220 (471)
.....++|.|+|+++++ ...|.|.+++ +++.. ..+. ........|+|+|+ +.. ++++-...
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~----lYv~~~~~~~~~ 103 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPY----VYAYRTVAEGGL 103 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCE----EEEEEEECTTSS
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCE----EEEEEecCCCCC
Confidence 35678999999985554 5679999998 44322 2121 12356789999998 331 33333322
Q ss_pred -CcEEEEeCCCCc-----ce-eeecC--CCCcceEEEEECCCCCEEEEEeCC-------------Ce-EEeccccc----
Q psy11350 221 -GSVKLWSLDKDT-----PL-ANLEG--HEPFRVSRIKFHPSGRFLGTCCWD-------------HS-WRLDTPLA---- 273 (471)
Q Consensus 221 -g~i~iwd~~~~~-----~~-~~~~~--~~~~~v~~~~~s~~~~~i~~~~~d-------------~~-~~~~~~~~---- 273 (471)
+.|..|+...+. .+ ..+.. ........++|.|+|.++++.+.. +. +++...-.
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence 567788876431 11 11331 111134689999999766664322 22 33321110
Q ss_pred -----------cccCCCCcceEEEEECC-CCCEEEEEecCCe--------EEEEECCCCc------------------EE
Q psy11350 274 -----------NLEGHEPFRVSRIKFHP-SGRFLGTCCWDHS--------WRLWDLNQGQ------------------EV 315 (471)
Q Consensus 274 -----------~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg~--------i~iwd~~~~~------------------~~ 315 (471)
.+....-.....++|+| ++.++++-...+. |.+. ..+. ++
T Consensus 184 npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~p~ 261 (352)
T 2ism_A 184 NPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGRGNDPRYRDPL 261 (352)
T ss_dssp CTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred CcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCCCCCCCCcCCe
Confidence 00000001356789999 5554444332222 3332 2221 22
Q ss_pred EEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCee------EEEecccCcCEEEEEEcCCCCEEEEEe
Q psy11350 316 LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC------IMFLEGHLKSVFSVDFSPDGYHLATGS 383 (471)
Q Consensus 316 ~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~------~~~~~~h~~~v~~~~~sp~~~~l~s~s 383 (471)
..+ .+......++| .+|.++++.-..+.|...++..... ...+..-...+..+++.|||.++++..
T Consensus 262 ~~~-~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 262 YFW-PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEC-TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred Eec-CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 222 22334567777 4677777666677788777654321 122222236789999999998776654
No 291
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.98 E-value=0.00014 Score=74.50 Aligned_cols=224 Identities=9% Similarity=-0.085 Sum_probs=124.7
Q ss_pred CeEEEEEecCCCEEEEEeC-CCcEEEEeCCCCceEEEeecCCCC-EEEEEEeeCCCCCCccEEEEEe-CC-----CcEEE
Q psy11350 154 PISYCSFSPDSQHVATASW-SGLCKLWTVPECELVQTFRGHDCN-VGAIEFHPLPSEGAVCSLASCA-QD-----GSVKL 225 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~-dg~i~iwd~~~~~~~~~~~~h~~~-v~~l~~~~~~~~~~~~~l~s~~-~d-----g~i~i 225 (471)
...++++.++++++++|+. ++.+.+||..+.+-...-..+... -.+++..+++. +++.|+ .+ ..+.+
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~-----iyv~GG~~~~~~~~~~~e~ 318 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR-----VFTIGGSWSGGVFEKNGEV 318 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC-----EEEECCCCCSSSCCCCEEE
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe-----EEEEeCcccCCcccccceE
Confidence 3445677899999999984 458999998876544322212111 12455566776 677777 34 56999
Q ss_pred EeCCCCcceeee-----cCCCCcceEEEEECCCCCEEEEEeCCCeEEe---------cccc--------ccccC-----C
Q psy11350 226 WSLDKDTPLANL-----EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL---------DTPL--------ANLEG-----H 278 (471)
Q Consensus 226 wd~~~~~~~~~~-----~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~---------~~~~--------~~~~~-----~ 278 (471)
||..+++....- ..... -....+..++..++.++.++.... ..+. ..... .
T Consensus 319 yd~~t~~W~~~~~~~~~p~~~~--~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~ 396 (656)
T 1k3i_A 319 YSPSSKTWTSLPNAKVNPMLTA--DKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAP 396 (656)
T ss_dssp EETTTTEEEEETTSCSGGGCCC--CTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECC
T ss_pred eCCCCCcceeCCCccccccccc--cccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCC
Confidence 999876533210 00000 000123345666666665544211 1100 00000 0
Q ss_pred CCcceEEEEECC-CCCEEEEEecCC-----------eEEEEECCCCcEEEEe--eCCCC-CeEEEEEeCCCCEEEEEeCC
Q psy11350 279 EPFRVSRIKFHP-SGRFLGTCCWDH-----------SWRLWDLNQGQEVLHQ--EGHGK-PVYCMSFQGDGSVVATGGLD 343 (471)
Q Consensus 279 ~~~~v~~l~~~~-~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~~--~~~~~-~v~~~~~s~d~~~l~t~~~d 343 (471)
....-.++.|.. +++.+++|+.++ .|.+||..+.+-.... ..+.. .-.+++..|++++++.|+.+
T Consensus 397 ~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~ 476 (656)
T 1k3i_A 397 DAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQR 476 (656)
T ss_dssp CCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBS
T ss_pred CCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcc
Confidence 011123444443 677788887543 6888898876544332 11222 22455677899999999864
Q ss_pred -----------CeEEEEeCCCCeeEE--EecccCcCEEEEEEcCCCCEEEEEeC
Q psy11350 344 -----------AFGRVWDLRTGRCIM--FLEGHLKSVFSVDFSPDGYHLATGSE 384 (471)
Q Consensus 344 -----------g~i~iwd~~~~~~~~--~~~~h~~~v~~~~~sp~~~~l~s~s~ 384 (471)
..+.+||..+.+-.. .+........+..+.|+|++++.|+.
T Consensus 477 ~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 477 RGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp BCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 468999988765322 11111222334556799999999985
No 292
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.98 E-value=0.0053 Score=57.49 Aligned_cols=225 Identities=16% Similarity=0.088 Sum_probs=121.8
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCc-eEEEee---cCCCCEEEEEEeeC---CCCCCccEEEEEeC---C--
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPL---PSEGAVCSLASCAQ---D-- 220 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~-~~~~~~---~h~~~v~~l~~~~~---~~~~~~~~l~s~~~---d-- 220 (471)
.....++|.|+|++++ +..+|.|++++ .+++ .+..+. ........|+++|+ +.. ++++-+. +
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~----lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSW----VYLYASYFAEGGH 102 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCE----EEEEEEEECGGGC
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCE----EEEEEeccCCCCC
Confidence 4567899999998554 55579999997 4554 222211 12356889999997 331 3333322 3
Q ss_pred --CcEEEEeCCCC--c-----ce-eeecCCCCcceEEEEECCCCCEEEEEeCC-------------Ce-EEeccccc---
Q psy11350 221 --GSVKLWSLDKD--T-----PL-ANLEGHEPFRVSRIKFHPSGRFLGTCCWD-------------HS-WRLDTPLA--- 273 (471)
Q Consensus 221 --g~i~iwd~~~~--~-----~~-~~~~~~~~~~v~~~~~s~~~~~i~~~~~d-------------~~-~~~~~~~~--- 273 (471)
+.|..|+.... . .+ ..+..........+.|.|||.++++.+.. +. +++...-.
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~ 182 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPA 182 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCT
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCC
Confidence 56777776543 1 11 11221111134679999999877764432 12 33321100
Q ss_pred -------cccCCCCcceEEEEECC-CCCEEEEEecCC---eEEEEECCC--------C--------cEEEEeeCCCCCeE
Q psy11350 274 -------NLEGHEPFRVSRIKFHP-SGRFLGTCCWDH---SWRLWDLNQ--------G--------QEVLHQEGHGKPVY 326 (471)
Q Consensus 274 -------~~~~~~~~~v~~l~~~~-~~~~l~~~~~dg---~i~iwd~~~--------~--------~~~~~~~~~~~~v~ 326 (471)
.+....-.....++|+| ++.++++-...+ .|.+..... + .++..+........
T Consensus 183 ~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 183 DNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp TSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 00000011356899999 555444432221 233332110 0 12222211234567
Q ss_pred EEEEe-------CCCCEEEEEeCCCeEEEEeCCCC-eeE--EEe-cccCcCEEEEEEcCCCCEEEEEe
Q psy11350 327 CMSFQ-------GDGSVVATGGLDAFGRVWDLRTG-RCI--MFL-EGHLKSVFSVDFSPDGYHLATGS 383 (471)
Q Consensus 327 ~~~~s-------~d~~~l~t~~~dg~i~iwd~~~~-~~~--~~~-~~h~~~v~~~~~sp~~~~l~s~s 383 (471)
.++|. .+|.++++.-..+.|...++... +.. ..+ .+....+..+++.|||.++++..
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 88883 46777777777788888888753 222 222 23345789999999998766654
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.96 E-value=0.0061 Score=63.26 Aligned_cols=188 Identities=8% Similarity=-0.111 Sum_probs=114.6
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcc----eeeecCCC
Q psy11350 166 HVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP----LANLEGHE 241 (471)
Q Consensus 166 ~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~ 241 (471)
+|+.+. ...|+..++........+.. ...+.+|+|.+.... ++++-...+.|+.+++..... ...+..
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~~-~~~~~gl~~d~~~~~----lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~-- 468 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNR----IYWSDLSQRMICSTQLDRAHGVSSYDTVISR-- 468 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEECS-CSSEEEEEEETTTTE----EEEEETTTTEEEEEEC--------CEEEECS--
T ss_pred cccccc-ccceeEeeccCCcceeeecC-CCceEEEeecccCCe----eEEeeccceeEEEEeccCCCCCcceeEEEec--
Confidence 343333 56677778766554444433 456778999886552 445555567788888754211 111100
Q ss_pred CcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEE-ecCCeEEEEECCCCcEEEEeeC
Q psy11350 242 PFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTC-CWDHSWRLWDLNQGQEVLHQEG 320 (471)
Q Consensus 242 ~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~ 320 (471)
.......|++.+.++.|+.+ ...+.|.+.++........+..
T Consensus 469 -------------------------------------~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~ 511 (791)
T 3m0c_C 469 -------------------------------------DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE 511 (791)
T ss_dssp -------------------------------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC
T ss_pred -------------------------------------CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC
Confidence 01235678888776555544 4568899999875544333444
Q ss_pred CCCCeEEEEEeCCCCEEEEEeC--CCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEE-eCCCcEEEEECCCcc
Q psy11350 321 HGKPVYCMSFQGDGSVVATGGL--DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG-SEDNAVKIWDLRKRR 397 (471)
Q Consensus 321 ~~~~v~~~~~s~d~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~-s~dg~i~iwd~~~~~ 397 (471)
.......|++.|.+.+|+.... .+.|.+.++........+.........|++++.+..|+.+ ...+.|...++....
T Consensus 512 ~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 512 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 4456789999997666655543 3689999986544433344344678999999866666555 455779999986543
Q ss_pred c
Q psy11350 398 L 398 (471)
Q Consensus 398 ~ 398 (471)
.
T Consensus 592 ~ 592 (791)
T 3m0c_C 592 R 592 (791)
T ss_dssp C
T ss_pred e
Confidence 3
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.94 E-value=0.0039 Score=63.10 Aligned_cols=225 Identities=11% Similarity=-0.015 Sum_probs=126.5
Q ss_pred CCcEEEEeCCCCc-eEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEEC
Q psy11350 173 SGLCKLWTVPECE-LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251 (471)
Q Consensus 173 dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s 251 (471)
...|+..++.... ....+...-....+|+|++.+.. ++.+-...+.|..++++.......+....-.....+++.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~----ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD 92 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGL----IYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACD 92 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTE----EEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEE
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCE----EEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEE
Confidence 6778888886543 12222223445779999997763 444545568899999865532222222222368899999
Q ss_pred CCCCEEEEEeC-CCeEEeccc----cccccCCCCcceEEEEECCCCCEEEEEec--CCeEEEEECCCCcEEEEeeCCCCC
Q psy11350 252 PSGRFLGTCCW-DHSWRLDTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCW--DHSWRLWDLNQGQEVLHQEGHGKP 324 (471)
Q Consensus 252 ~~~~~i~~~~~-d~~~~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~ 324 (471)
+.+..++.+.. .+.+..... ...+....-.....|++.|.+.+|+.+.. .+.|...++............-..
T Consensus 93 ~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~ 172 (619)
T 3s94_A 93 WLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYW 172 (619)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSS
T ss_pred ecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCC
Confidence 97666655543 344433211 11222122234678999997666666653 467887887644333333333456
Q ss_pred eEEEEEeCCCCEEEEE-eCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchhee
Q psy11350 325 VYCMSFQGDGSVVATG-GLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402 (471)
Q Consensus 325 v~~~~~s~d~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 402 (471)
.+.+++++++..|+.+ ...+.|..+|+..........+......+|++..+ ..+++-...+.|...|..+++.+..+
T Consensus 173 P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 173 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred CcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEE
Confidence 7899999976655555 45678999998654433322222233457777655 44455556788999998887655444
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.93 E-value=5.9e-05 Score=77.69 Aligned_cols=181 Identities=8% Similarity=-0.098 Sum_probs=102.6
Q ss_pred CCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc---ceeeecCCCCcceEEEE
Q psy11350 173 SGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT---PLANLEGHEPFRVSRIK 249 (471)
Q Consensus 173 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~ 249 (471)
.+.|++.++.+.+....+... ..+..|+|.+.... ++++-...+.|..+++.... ....+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~-~~p~gla~d~~~~~----Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i----------- 448 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNL-RNVVALDTEVASNR----IYWSDLSQRMICSTQLDRAHGVSSYDTVI----------- 448 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCC-TTCCCCEEETTTTE----EEECCTTTTSBEEEESCCCCC-CCCCCBC-----------
T ss_pred ccceEEEeCCCCcceeeeccC-cceEEEccccccCe----EEEEecCCCeEEEEecCCCCCCcceEEEE-----------
Confidence 467888888776555444332 34568899886652 33343455778888875410 000000
Q ss_pred ECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCE-EEEEecCCeEEEEECCCCcEEEEeeCCCCCeEEE
Q psy11350 250 FHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRF-LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328 (471)
Q Consensus 250 ~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 328 (471)
... ......|++.+.+.. +++-...+.|.++++........+.........+
T Consensus 449 --------------------------~~~-~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~gi 501 (699)
T 1n7d_A 449 --------------------------SRD-IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAI 501 (699)
T ss_dssp --------------------------CSC-C--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCE
T ss_pred --------------------------eCC-CCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceE
Confidence 000 112445777754444 4444456789999987554333333223445788
Q ss_pred EEeCCCCEEEEEeC-C-CeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCc
Q psy11350 329 SFQGDGSVVATGGL-D-AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY-HLATGSEDNAVKIWDLRKR 396 (471)
Q Consensus 329 ~~s~d~~~l~t~~~-d-g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~i~iwd~~~~ 396 (471)
+++|.+.+|+.+.. . +.|.++++........+.........|+|+|++. ++++-+..+.|.++++...
T Consensus 502 avDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 502 VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp ECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred EEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 99986555554432 2 6788887754322222222234577899998754 4455556678999998743
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.92 E-value=0.026 Score=57.16 Aligned_cols=229 Identities=6% Similarity=-0.099 Sum_probs=142.0
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEee-cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCc
Q psy11350 165 QHVATASWSGLCKLWTVPECELVQTFR-GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPF 243 (471)
Q Consensus 165 ~~l~tg~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 243 (471)
.+|+.+. .+.|+..++.+......+. ..-..+.+|+|++.... ++.+-..++.|..+++........+.... .
T Consensus 7 ~~Ll~s~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~----lywtD~~~~~I~r~~~~g~~~~~v~~~g~-~ 80 (628)
T 4a0p_A 7 AFLLFSR-RADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNR----IYWTDISLKTISRAFMNGSALEHVVEFGL-D 80 (628)
T ss_dssp CEEEEEE-TTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTE----EEEEETTTTEEEEEETTSCSCEEEECSSC-S
T ss_pred cEEEEEe-CCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCE----EEEEECCCCeEEEEECCCCCcEEEEeCCC-C
Confidence 3455443 6789999988665443332 12346779999997763 45565677899999986544333333222 2
Q ss_pred ceEEEEECCCCCEEEEEeC-CCeEEecc----ccccccCCCCcceEEEEECCCCCEEEEEec--CCeEEEEECCCCcEEE
Q psy11350 244 RVSRIKFHPSGRFLGTCCW-DHSWRLDT----PLANLEGHEPFRVSRIKFHPSGRFLGTCCW--DHSWRLWDLNQGQEVL 316 (471)
Q Consensus 244 ~v~~~~~s~~~~~i~~~~~-d~~~~~~~----~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~ 316 (471)
....+++.+.+..|+.+.. .+.+.... ....+....-.....|++.|...+|+.... .+.|...++.......
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~ 160 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT 160 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE
Confidence 5678888877666655544 33333311 111222122335789999997666666653 5678888886544332
Q ss_pred EeeCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 317 HQEGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 317 ~~~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
.. ........+++++++..|+.+. ..+.|..+|+..... ..+........++++.. +.++++-...+.|...|..+
T Consensus 161 l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 161 LV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp EE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTT
T ss_pred EE-CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCC
Confidence 23 3445678999999766666554 567899999865433 33333445567888865 45555655678899999877
Q ss_pred ccchhee
Q psy11350 396 RRLLKWC 402 (471)
Q Consensus 396 ~~~~~~~ 402 (471)
++....+
T Consensus 238 g~~~~~l 244 (628)
T 4a0p_A 238 GQNRTII 244 (628)
T ss_dssp CCSCEEE
T ss_pred CCceEEE
Confidence 7655444
No 297
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.85 E-value=0.0006 Score=65.87 Aligned_cols=111 Identities=10% Similarity=0.012 Sum_probs=66.9
Q ss_pred ceEEEEECCCCCEEEEEecC-C----eEEEEECCCCcEE--EEeeCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEeCCC
Q psy11350 282 RVSRIKFHPSGRFLGTCCWD-H----SWRLWDLNQGQEV--LHQEGHGKPVYCMSFQG-DGSVVATGGLDAFGRVWDLRT 353 (471)
Q Consensus 282 ~v~~l~~~~~~~~l~~~~~d-g----~i~iwd~~~~~~~--~~~~~~~~~v~~~~~s~-d~~~l~t~~~dg~i~iwd~~~ 353 (471)
....|+|++++++|+++... + .+.+++.. +... ..+.. ......++++| +|.++++-..++.|+.++...
T Consensus 180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~ 257 (430)
T 3tc9_A 180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTT 257 (430)
T ss_dssp CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTT
T ss_pred CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCC
Confidence 35667777777655554431 1 23333322 2111 12211 22345788999 777777776788999999987
Q ss_pred CeeEEEec-ccCcCEEEEEEcCCCCEE-EEEeCCCcEEEEECC
Q psy11350 354 GRCIMFLE-GHLKSVFSVDFSPDGYHL-ATGSEDNAVKIWDLR 394 (471)
Q Consensus 354 ~~~~~~~~-~h~~~v~~~~~sp~~~~l-~s~s~dg~i~iwd~~ 394 (471)
+....... +.......++|+|+|++| ++-...+.|..++..
T Consensus 258 ~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 258 QETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp TEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 75422222 122457899999999955 444567889998765
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.81 E-value=0.037 Score=55.97 Aligned_cols=207 Identities=7% Similarity=-0.000 Sum_probs=126.5
Q ss_pred cCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceEEEeec------CCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEE
Q psy11350 153 RPISYCSFSPDSQHVATAS-WSGLCKLWTVPECELVQTFRG------HDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL 225 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~-~dg~i~iwd~~~~~~~~~~~~------h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 225 (471)
..+.+++|.+....|+.+. ..+.|+.++.........+.. ....+..+++.+.+.+ +..+.+..+.|.+
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~n----LY~td~~~~~I~v 415 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRY----IYWTCEATNVINV 415 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTE----EEEEETTTTEEEE
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCe----EEEEcCCCCEEEE
Confidence 4578899998877777665 457788888764433333322 2346789999887663 4556666788888
Q ss_pred EeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEe-cCC--
Q psy11350 226 WSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC-WDH-- 302 (471)
Q Consensus 226 wd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg-- 302 (471)
.+++ |+....+.... .....+|++.|...+|+... ...
T Consensus 416 ~~~~-G~~~~~l~~~~--------------------------------------l~~Pr~iavdp~~g~ly~tD~g~~~~ 456 (628)
T 4a0p_A 416 TRLD-GRSVGVVLKGE--------------------------------------QDRPRAVVVNPEKGYMYFTNLQERSP 456 (628)
T ss_dssp EETT-SCEEEEEEECT--------------------------------------TCCEEEEEEETTTTEEEEEEEETTEE
T ss_pred EECC-CCeEEEEEeCC--------------------------------------CCceeeEEEecCCCeEEEeecCCCCC
Confidence 8874 33322221111 12467788887444443332 222
Q ss_pred eEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCCCeeEEEec-ccCcCEEEEEEcCCCCEEE
Q psy11350 303 SWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTGRCIMFLE-GHLKSVFSVDFSPDGYHLA 380 (471)
Q Consensus 303 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~ 380 (471)
.|...++............-...+.|++++++..|+.+. ..+.|...++.... ...+. .......+|+... +.+++
T Consensus 457 ~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~-r~~~~~~~~~~P~glav~~-~~ly~ 534 (628)
T 4a0p_A 457 KIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGAN-RIVLEDSNILQPVGLTVFE-NWLYW 534 (628)
T ss_dssp EEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCEEEEEEET-TEEEE
T ss_pred eEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCc-eEEEEcCCCCCcEEEEEEC-CEEEE
Confidence 566667654333222332344568999999877666664 45789999985443 33332 3345678888764 45556
Q ss_pred EEeCCCcEEEEECCCccchheecc
Q psy11350 381 TGSEDNAVKIWDLRKRRLLKWCTQ 404 (471)
Q Consensus 381 s~s~dg~i~iwd~~~~~~~~~~~~ 404 (471)
+=...+.|...|..+++....+..
T Consensus 535 tD~~~~~i~~~~k~~G~~~~~i~~ 558 (628)
T 4a0p_A 535 IDKQQQMIEKIDMTGREGRTKVQA 558 (628)
T ss_dssp EETTTTEEEEEETTSSSCCEEEEC
T ss_pred EECCCCeEEEEECcCCCCcEEEec
Confidence 656677888889888887666554
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.80 E-value=0.0029 Score=57.67 Aligned_cols=163 Identities=12% Similarity=0.145 Sum_probs=105.7
Q ss_pred CCCEEEEEEeeCCCCCCccEEEEEe-CCCcEEEEeCCCCcceee-ecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccc
Q psy11350 194 DCNVGAIEFHPLPSEGAVCSLASCA-QDGSVKLWSLDKDTPLAN-LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP 271 (471)
Q Consensus 194 ~~~v~~l~~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~ 271 (471)
...--++.|++... .|..++ ..++|..|+...+..... +..-.
T Consensus 12 ~~yPE~~~wd~~~g-----~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s------------------------------ 56 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQ-----VFYQSNLYKGRIEVYNPKTQSHFNVVIDGAS------------------------------ 56 (334)
T ss_dssp TCCCSCEEEETTTT-----EEEEEETTTTEEEEECTTTCCEEEECCTTTC------------------------------
T ss_pred ccCCcCccCcCCCC-----EEEEEeccCCEEEEEcCCCCeEEEEecCCcc------------------------------
Confidence 33445788988665 455555 789999999865533222 11100
Q ss_pred cccccCCCCcceEEEEE---CCCCCEEEEEe-------------cCCeEEEEECC---CCcEEEEeeC------------
Q psy11350 272 LANLEGHEPFRVSRIKF---HPSGRFLGTCC-------------WDHSWRLWDLN---QGQEVLHQEG------------ 320 (471)
Q Consensus 272 ~~~~~~~~~~~v~~l~~---~~~~~~l~~~~-------------~dg~i~iwd~~---~~~~~~~~~~------------ 320 (471)
..+.....+..|.| .|+++++++.. .+..|..||+. +++.+....-
T Consensus 57 ---~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g 133 (334)
T 2p9w_A 57 ---SNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAG 133 (334)
T ss_dssp ---CSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHS
T ss_pred ---ccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccccccccc
Confidence 00010123467777 46665555433 25779999998 7776654431
Q ss_pred -CCCCeEEEEEeCCCCEEEEEeCC-CeEEEEeCCCCeeEEEec------ccCcCEEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11350 321 -HGKPVYCMSFQGDGSVVATGGLD-AFGRVWDLRTGRCIMFLE------GHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392 (471)
Q Consensus 321 -~~~~v~~~~~s~d~~~l~t~~~d-g~i~iwd~~~~~~~~~~~------~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd 392 (471)
-......++..++|+..++++.. +.|...+.... .+..+. ......+.|+++|+|+.|++....|.|..+|
T Consensus 134 ~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD 212 (334)
T 2p9w_A 134 KRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFD 212 (334)
T ss_dssp SCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred ccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence 11247899999999999999888 88888876533 333221 1122367999999999988887799999999
Q ss_pred CCC
Q psy11350 393 LRK 395 (471)
Q Consensus 393 ~~~ 395 (471)
+.+
T Consensus 213 ~~~ 215 (334)
T 2p9w_A 213 VSK 215 (334)
T ss_dssp CSS
T ss_pred CCC
Confidence 884
No 300
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.76 E-value=0.013 Score=54.39 Aligned_cols=207 Identities=13% Similarity=0.079 Sum_probs=118.4
Q ss_pred CcCeEEEEEecCCCEEEEEe------------CCCcEEEEeCCC--CceEE-Eeec-----CCCCEEEEEEeeCCCCCCc
Q psy11350 152 TRPISYCSFSPDSQHVATAS------------WSGLCKLWTVPE--CELVQ-TFRG-----HDCNVGAIEFHPLPSEGAV 211 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~------------~dg~i~iwd~~~--~~~~~-~~~~-----h~~~v~~l~~~~~~~~~~~ 211 (471)
....-.+.+.|+|..+++++ .+|.|.++|+.+ ++... .+.+ .......|.+.++.. ...
T Consensus 49 ~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d-g~~ 127 (355)
T 3sre_A 49 DNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD-NTV 127 (355)
T ss_dssp CSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT-CCE
T ss_pred CCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC-CcE
Confidence 34556777888875544441 689999999873 33221 2222 224677888877521 112
Q ss_pred cEEEEE-eC--CCcEEEEeCCCCc----ceeeecCCCCcceEEEEECCCCCEEEEEeC---C--------------Ce-E
Q psy11350 212 CSLASC-AQ--DGSVKLWSLDKDT----PLANLEGHEPFRVSRIKFHPSGRFLGTCCW---D--------------HS-W 266 (471)
Q Consensus 212 ~~l~s~-~~--dg~i~iwd~~~~~----~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~---d--------------~~-~ 266 (471)
+|+.+ .. +.+|.+|++..+. .+..+.+..-...+++.+.++|.+.++... | +. +
T Consensus 128 -~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 128 -YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp -EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred -EEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence 34443 22 4678888765432 334455555557899999999998777541 1 11 2
Q ss_pred EeccccccccCCCCcceEEEEECCCCCEEEEEe-cCCeEEEEECCC-CcE--EEEeeCCCCCeEEEEEeC-CCCEEEEEe
Q psy11350 267 RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC-WDHSWRLWDLNQ-GQE--VLHQEGHGKPVYCMSFQG-DGSVVATGG 341 (471)
Q Consensus 267 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~--~~~~~~~~~~v~~~~~s~-d~~~l~t~~ 341 (471)
++...........-...+.++|+||++.|+++. ..+.|..|++.. ++. ...+ ......-.+++.+ +|++.+++.
T Consensus 207 r~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 207 YYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred EEECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 222111111011112467899999999887765 568899999864 322 2223 2245567889999 598877665
Q ss_pred CC-CeEEEEeCC--CCeeEEEec
Q psy11350 342 LD-AFGRVWDLR--TGRCIMFLE 361 (471)
Q Consensus 342 ~d-g~i~iwd~~--~~~~~~~~~ 361 (471)
.+ +.|..|+.. .+..+..+.
T Consensus 286 ~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 286 PNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp SCHHHHHSCCTTSCCCEEEEEEE
T ss_pred CCceEEEEECCCCCCCCEEEEEE
Confidence 44 344444443 244444443
No 301
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.75 E-value=0.066 Score=58.10 Aligned_cols=75 Identities=17% Similarity=0.234 Sum_probs=51.6
Q ss_pred CcCeEEEEEecC------CCEEEEEeC-CCcEEEEeCCCCceEEEeecC-CCCEEEEEEeeCCCCCCccEEEEEeCCCcE
Q psy11350 152 TRPISYCSFSPD------SQHVATASW-SGLCKLWTVPECELVQTFRGH-DCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223 (471)
Q Consensus 152 ~~~V~~~~~s~~------~~~l~tg~~-dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 223 (471)
...|+|+++.|. ++++|.|.+ |++|+|+++++.+.+....-. .....++.+...+. ..+|..|-.||.+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~---~~~L~igl~dG~l 629 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFES---SHYLLCALGDGAL 629 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETT---EEEEEEEETTSEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCC---CcEEEEEeCCCeE
Confidence 457999999864 468999998 999999999987766543321 23445555543321 1268889999988
Q ss_pred EEEeCC
Q psy11350 224 KLWSLD 229 (471)
Q Consensus 224 ~iwd~~ 229 (471)
.-+.++
T Consensus 630 ~~~~~d 635 (1158)
T 3ei3_A 630 FYFGLN 635 (1158)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 665543
No 302
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.63 E-value=0.04 Score=50.96 Aligned_cols=227 Identities=12% Similarity=0.049 Sum_probs=125.1
Q ss_pred CCcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEE--Ee----ecCCCCEEEEEEeeC---CCCCCccEEEEE---e
Q psy11350 151 DTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ--TF----RGHDCNVGAIEFHPL---PSEGAVCSLASC---A 218 (471)
Q Consensus 151 h~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~--~~----~~h~~~v~~l~~~~~---~~~~~~~~l~s~---~ 218 (471)
.-...+.|+|.|||.++++--..|.|++++..+++... .+ .........|+++|+ +. .|+.. .
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g-----~lYv~yt~~ 104 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDH-----MVYAYFTSA 104 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHC-----EEEEEEECS
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCC-----EEEEEEecC
Confidence 34567899999999977776558999999876655422 11 123466789999995 22 23332 2
Q ss_pred CCCcEEEEeCCCCc----------ce-eeecCCCCcceEEEEECCCCCEEEEEeCC--------------CeEEeccccc
Q psy11350 219 QDGSVKLWSLDKDT----------PL-ANLEGHEPFRVSRIKFHPSGRFLGTCCWD--------------HSWRLDTPLA 273 (471)
Q Consensus 219 ~dg~i~iwd~~~~~----------~~-~~~~~~~~~~v~~~~~s~~~~~i~~~~~d--------------~~~~~~~~~~ 273 (471)
.++.|.-|.+..+. .+ ..+..........+.|.|||.++++.+.. +.+++...-.
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 44556666654421 11 11222111135679999999877775432 2244421111
Q ss_pred ----------cccCCCCcceEEEEECCCCCEEEEEe-cCCeEEEEECCCCc------------------EEEEeeCCCCC
Q psy11350 274 ----------NLEGHEPFRVSRIKFHPSGRFLGTCC-WDHSWRLWDLNQGQ------------------EVLHQEGHGKP 324 (471)
Q Consensus 274 ----------~~~~~~~~~v~~l~~~~~~~~l~~~~-~dg~i~iwd~~~~~------------------~~~~~~~~~~~ 324 (471)
.+....-.....++|+|+|.++++-. .++.=.|.-+..+. ++..+..+...
T Consensus 185 ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~a 264 (347)
T 3das_A 185 PAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEAS 264 (347)
T ss_dssp BCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCC
T ss_pred ccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCC
Confidence 00000011356899999876554432 22222222222221 12222222235
Q ss_pred eEEEEEeCCCCEEEEEeCCCeEEEEeCCCCee----EEEecccCcCEEEEEEcCCCCEEEEEe
Q psy11350 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC----IMFLEGHLKSVFSVDFSPDGYHLATGS 383 (471)
Q Consensus 325 v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~sp~~~~l~s~s 383 (471)
...++|. +|.+++..-..+.|....+..... ...+.+..+.+..|+..|||.++++..
T Consensus 265 p~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 265 PSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 5677776 466666665666676666654432 233444457899999999998766643
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.56 E-value=0.082 Score=53.39 Aligned_cols=201 Identities=9% Similarity=0.003 Sum_probs=115.9
Q ss_pred cCeEEEEEecCCCEEEEEe-CCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCC
Q psy11350 153 RPISYCSFSPDSQHVATAS-WSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKD 231 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 231 (471)
..+.+++|.+.+..|+.+. ..+.|+.+++........+...-.....+++.+.+.+ ++++-+..+.|.+.++...
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~----lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARN----LYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTE----EEEEETTTTEEEEEETTSC
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCc----EEEEeCCCCcEEEEeCCCC
Confidence 3467888988666666554 4678888887654443333333345668888875553 4555556678888887543
Q ss_pred cceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEec--CCeEEEEEC
Q psy11350 232 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW--DHSWRLWDL 309 (471)
Q Consensus 232 ~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~--dg~i~iwd~ 309 (471)
. ...+.... -....+|++.|...+|+.+.. .+.|...++
T Consensus 425 ~-~~~l~~~~--------------------------------------l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~ 465 (619)
T 3s94_A 425 M-RKILISED--------------------------------------LEEPRAIVLDPMVGYMYWTDWGEIPKIERAAL 465 (619)
T ss_dssp S-CEEEECTT--------------------------------------CCSEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred e-EEEEEECC--------------------------------------CCCeeeEEEEcCCCcEEEecCCCCCEEEEEcc
Confidence 2 22221111 124677888876445544432 356766666
Q ss_pred CCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcE
Q psy11350 310 NQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388 (471)
Q Consensus 310 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i 388 (471)
............-...+.|++++++..|+.+. ..+.|..+++........+........+|+...+ .++++-...+.|
T Consensus 466 dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~-~ly~tD~~~~~I 544 (619)
T 3s94_A 466 DGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD-YVYWTDWQRRSI 544 (619)
T ss_dssp TSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETT-EEEEECTTSSCE
T ss_pred CCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECC-EEEEeecCCCeE
Confidence 54332222233345678999998766666654 4578999998644322222222233445666533 444444456778
Q ss_pred EEEECCCcc
Q psy11350 389 KIWDLRKRR 397 (471)
Q Consensus 389 ~iwd~~~~~ 397 (471)
...|..++.
T Consensus 545 ~~~~k~~g~ 553 (619)
T 3s94_A 545 ERVHKRSAE 553 (619)
T ss_dssp EEEESSSCC
T ss_pred EEEEcCCCc
Confidence 888887773
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.51 E-value=0.0081 Score=54.62 Aligned_cols=221 Identities=13% Similarity=0.028 Sum_probs=107.8
Q ss_pred CCCEEEEEe-CC-----CcEEEEeCCCCceEEEe--ecCCCCEEEEEEeeCCCCCCccEEEEEeCC-----CcEEEEeCC
Q psy11350 163 DSQHVATAS-WS-----GLCKLWTVPECELVQTF--RGHDCNVGAIEFHPLPSEGAVCSLASCAQD-----GSVKLWSLD 229 (471)
Q Consensus 163 ~~~~l~tg~-~d-----g~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~ 229 (471)
++.+++.|+ .+ ..+.+||+.+.+-...- ....... +++ ..++. +++.|+.+ ..+.+||+.
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~-----l~v~GG~~~~~~~~~~~~~d~~ 86 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYV-ASV-SLHDR-----IYVIGGYDGRSRLSSVECLDYT 86 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEE-EETTE-----EEEECCBCSSCBCCCEEEEETT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccc-cEE-EECCE-----EEEEcCCCCCccCceEEEEECC
Confidence 445566666 32 47889998776533221 1111111 122 22333 56667654 468899988
Q ss_pred CCc---ceeeecCCCCcceEEEEECCCCCEEEEEeCCCe------EEe------ccccccccCCCCcceEEEEECCCCCE
Q psy11350 230 KDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS------WRL------DTPLANLEGHEPFRVSRIKFHPSGRF 294 (471)
Q Consensus 230 ~~~---~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~------~~~------~~~~~~~~~~~~~~v~~l~~~~~~~~ 294 (471)
+++ -...-.......-.+++. .+++.++.|+.++. +.+ |.....+... ......+.+ +++.
T Consensus 87 ~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~--~~~i 162 (301)
T 2vpj_A 87 ADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA-REGAGLVVA--SGVI 162 (301)
T ss_dssp CCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC-CBSCEEEEE--TTEE
T ss_pred CCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC-cccceEEEE--CCEE
Confidence 776 322211111111112222 26777777765432 111 1111111111 111222222 5667
Q ss_pred EEEEecC-----CeEEEEECCCCcEEEEeeC-CCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEeCCCCeeEEE--ec
Q psy11350 295 LGTCCWD-----HSWRLWDLNQGQEVLHQEG-HGKPVYCMSFQGDGSVVATGGLD-----AFGRVWDLRTGRCIMF--LE 361 (471)
Q Consensus 295 l~~~~~d-----g~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~~~d-----g~i~iwd~~~~~~~~~--~~ 361 (471)
++.|+.+ ..+.+||+.+.+-...-.. ....-.+++. -++++++.|+.+ ..+.+||+.+.+-... +.
T Consensus 163 yv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 241 (301)
T 2vpj_A 163 YCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT 241 (301)
T ss_dssp EEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred EEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC
Confidence 7777654 4588999887653322111 1111112222 266788888764 4689999987753322 21
Q ss_pred ccCcCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCcc
Q psy11350 362 GHLKSVFSVDFSPDGYHLATGSED-----NAVKIWDLRKRR 397 (471)
Q Consensus 362 ~h~~~v~~~~~sp~~~~l~s~s~d-----g~i~iwd~~~~~ 397 (471)
........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 242 ~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 242 TPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 11112222333 66777777755 357788887654
No 305
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.45 E-value=0.032 Score=52.12 Aligned_cols=223 Identities=14% Similarity=0.073 Sum_probs=118.4
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEe-------ecCCCCEEEEEEeeC---CCCCCccEEEEEeC----
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTF-------RGHDCNVGAIEFHPL---PSEGAVCSLASCAQ---- 219 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~-------~~h~~~v~~l~~~~~---~~~~~~~~l~s~~~---- 219 (471)
....|+|.|+|++|+++...|.|++++.. +.....+ .........|+|+|+ +.. +.++-+.
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~----lYv~~~~~~~~ 93 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRR----IWLSYSEVGDD 93 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCE----EEEEEEEECSS
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCE----EEEEEeCCCCC
Confidence 46789999999944455568999999853 3322111 112345789999995 331 3333222
Q ss_pred ---CCcEEEEeCCCCc----cee----eecC--CCCcceEEEEECCCCCEEEEEeCC-------------C-eEEecccc
Q psy11350 220 ---DGSVKLWSLDKDT----PLA----NLEG--HEPFRVSRIKFHPSGRFLGTCCWD-------------H-SWRLDTPL 272 (471)
Q Consensus 220 ---dg~i~iwd~~~~~----~~~----~~~~--~~~~~v~~~~~s~~~~~i~~~~~d-------------~-~~~~~~~~ 272 (471)
...|..|++..+. ... .+.. ........+.|.|||.++++.+.. + .+++...-
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 2356666654331 111 1111 011124679999999766654432 1 24442111
Q ss_pred c---------------cccCCCCcceEEEEECCCCCEEEEEecCC--eEEEEECCCC-----------------------
Q psy11350 273 A---------------NLEGHEPFRVSRIKFHPSGRFLGTCCWDH--SWRLWDLNQG----------------------- 312 (471)
Q Consensus 273 ~---------------~~~~~~~~~v~~l~~~~~~~~l~~~~~dg--~i~iwd~~~~----------------------- 312 (471)
. .+....-.....++|+|....|+++.... .=.|.-+..+
T Consensus 174 ~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 174 EIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCccc
Confidence 0 00000012367899999434444443321 1112111111
Q ss_pred --------cEEEEeeCCCCCeEEEEEeC-------CCCEEEEEeCCCeEEEEeCCCCeeEEE---ecccCcCEEEEEEcC
Q psy11350 313 --------QEVLHQEGHGKPVYCMSFQG-------DGSVVATGGLDAFGRVWDLRTGRCIMF---LEGHLKSVFSVDFSP 374 (471)
Q Consensus 313 --------~~~~~~~~~~~~v~~~~~s~-------d~~~l~t~~~dg~i~iwd~~~~~~~~~---~~~h~~~v~~~~~sp 374 (471)
.++..+. +......+.|.+ +|.++++.-..+.|...++..++.... +......+..+++.|
T Consensus 254 ~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p 332 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP 332 (353)
T ss_dssp BSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECT
T ss_pred CCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECC
Confidence 1112222 234566788864 467777777788888888876644322 222335799999999
Q ss_pred CCCEEEEE
Q psy11350 375 DGYHLATG 382 (471)
Q Consensus 375 ~~~~l~s~ 382 (471)
||.++++.
T Consensus 333 dG~lyv~t 340 (353)
T 2g8s_A 333 DGYLYVLT 340 (353)
T ss_dssp TSCEEEEE
T ss_pred CCcEEEEE
Confidence 99866653
No 306
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.36 E-value=0.014 Score=53.03 Aligned_cols=219 Identities=12% Similarity=0.091 Sum_probs=105.6
Q ss_pred CCEEEEEeCC----CcEEEEeCCCCceEEE--eecCCCCEEEEEEeeCCCCCCccEEEEEeCC-----CcEEEEeCCCCc
Q psy11350 164 SQHVATASWS----GLCKLWTVPECELVQT--FRGHDCNVGAIEFHPLPSEGAVCSLASCAQD-----GSVKLWSLDKDT 232 (471)
Q Consensus 164 ~~~l~tg~~d----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~ 232 (471)
+.+++.|+.+ ..+.+||+.+.+-... +......- +++.. ++. +++.|+.+ ..+.+||..+.+
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~-----lyv~GG~~~~~~~~~~~~~d~~~~~ 88 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA-GMVYM-AGL-----VFAVGGFNGSLRVRTVDSYDPVKDQ 88 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TTE-----EEEESCBCSSSBCCCEEEEETTTTE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccc-eEEEE-CCE-----EEEEeCcCCCccccceEEECCCCCc
Confidence 3455566543 4688899877653322 11111111 22222 333 56666654 358889987765
Q ss_pred ceeeecCCCCcceEEEEECCCCCEEEEEeCCCe------EEe------ccccccccCCCCcceEEEEECCCCCEEEEEec
Q psy11350 233 PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS------WRL------DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW 300 (471)
Q Consensus 233 ~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~------~~~------~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~ 300 (471)
-...-.......-.+++. -++..++.|+.++. +.+ |.....+... ......+.+ ++..++.|+.
T Consensus 89 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~ 164 (302)
T 2xn4_A 89 WTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTR-RSSVGVGVV--GGLLYAVGGY 164 (302)
T ss_dssp EEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSC-CBSCEEEEE--TTEEEEECCE
T ss_pred eeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCc-ccCceEEEE--CCEEEEEeCC
Confidence 332221111111112222 25677777775542 111 1111111111 111222222 5566666654
Q ss_pred C-------CeEEEEECCCCcEEEE--eeCCCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEeCCCCeeEEE--ecccC
Q psy11350 301 D-------HSWRLWDLNQGQEVLH--QEGHGKPVYCMSFQGDGSVVATGGLD-----AFGRVWDLRTGRCIMF--LEGHL 364 (471)
Q Consensus 301 d-------g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~s~d~~~l~t~~~d-----g~i~iwd~~~~~~~~~--~~~h~ 364 (471)
+ ..+.+||+.+.+-... +....... +++.. ++++++.|+.+ ..+.+||+.+.+-... +....
T Consensus 165 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r 242 (302)
T 2xn4_A 165 DVASRQCLSTVECYNATTNEWTYIAEMSTRRSGA-GVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR 242 (302)
T ss_dssp ETTTTEECCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC
T ss_pred CCCCCccccEEEEEeCCCCcEEECCCCccccccc-cEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc
Confidence 3 3588999987653322 11111111 22222 67788888764 3689999987643321 21111
Q ss_pred cCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCcc
Q psy11350 365 KSVFSVDFSPDGYHLATGSEDN-----AVKIWDLRKRR 397 (471)
Q Consensus 365 ~~v~~~~~sp~~~~l~s~s~dg-----~i~iwd~~~~~ 397 (471)
.....+.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 243 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 243 RNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp BSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 11122222 667777777553 48888887764
No 307
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.34 E-value=0.034 Score=54.03 Aligned_cols=196 Identities=11% Similarity=0.044 Sum_probs=111.0
Q ss_pred CEEEEEEeeC-CCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCC--CcceEEEEE-------CCCCCEEEEEeCCC-
Q psy11350 196 NVGAIEFHPL-PSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE--PFRVSRIKF-------HPSGRFLGTCCWDH- 264 (471)
Q Consensus 196 ~v~~l~~~~~-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~-------s~~~~~i~~~~~d~- 264 (471)
....|+|.|. ..+ ++++....+.|++.|+.++.......... ......++| +++|.+++++...+
T Consensus 140 ~p~~la~dp~~~~~----Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKDH----LYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEEE----EEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCCCCE----EEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 3568999983 332 44444444678889987766554443322 225899999 99999777766554
Q ss_pred -------eEEec-cccccccC-------CCCcceEEEEECCCCC-EEEEEecCCeEEEEECC-------CCcE-------
Q psy11350 265 -------SWRLD-TPLANLEG-------HEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLN-------QGQE------- 314 (471)
Q Consensus 265 -------~~~~~-~~~~~~~~-------~~~~~v~~l~~~~~~~-~l~~~~~dg~i~iwd~~-------~~~~------- 314 (471)
...+. .....+.. ..-.....++++|++. ++++-..++.|..+|+. ++..
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred CcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 11221 11001110 0011245788899554 45555677889999987 4443
Q ss_pred ----EEE-e-eCCCCCeEEEEEeCCCCEEEEE-eCCCeEEEEeCC--CCee--EEEeccc---C------------cCEE
Q psy11350 315 ----VLH-Q-EGHGKPVYCMSFQGDGSVVATG-GLDAFGRVWDLR--TGRC--IMFLEGH---L------------KSVF 368 (471)
Q Consensus 315 ----~~~-~-~~~~~~v~~~~~s~d~~~l~t~-~~dg~i~iwd~~--~~~~--~~~~~~h---~------------~~v~ 368 (471)
... + .+.....+.++|+|+|++|+.+ .....|+.++.. ++.. ...+-+. . ....
T Consensus 296 ~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 296 NPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp CTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred cccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCe
Confidence 111 1 1223445799999999954444 566788886543 3321 0122211 0 1244
Q ss_pred -EEEEc-------CCCCEEEEEeCCCcEEEEECCCc
Q psy11350 369 -SVDFS-------PDGYHLATGSEDNAVKIWDLRKR 396 (471)
Q Consensus 369 -~~~~s-------p~~~~l~s~s~dg~i~iwd~~~~ 396 (471)
.++.. ++|.++++=.....|+.++ .++
T Consensus 376 ~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G 410 (496)
T 3kya_A 376 QGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG 410 (496)
T ss_dssp EEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC
T ss_pred EEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC
Confidence 44444 4556666666677788887 445
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.23 E-value=0.09 Score=48.98 Aligned_cols=27 Identities=19% Similarity=0.278 Sum_probs=21.2
Q ss_pred CCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe
Q psy11350 195 CNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227 (471)
Q Consensus 195 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 227 (471)
.....++|.|++. ++.+..+|.|.+++
T Consensus 31 ~~P~~ia~~pdG~------l~V~e~~g~I~~i~ 57 (352)
T 2ism_A 31 EVPWALAFLPDGG------MLIAERPGRIRLFR 57 (352)
T ss_dssp SCEEEEEECTTSC------EEEEETTTEEEEEE
T ss_pred CCceEEEEcCCCe------EEEEeCCCeEEEEE
Confidence 3467999999987 55556779999988
No 309
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.17 E-value=0.044 Score=50.42 Aligned_cols=142 Identities=11% Similarity=0.222 Sum_probs=89.9
Q ss_pred EEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCC
Q psy11350 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSG 292 (471)
Q Consensus 213 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 292 (471)
+++.....+-+.+||+ +|+.+..+... .++.+..-| .+.+ .|
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~~g---~~nnVD~r~--------------------------------~~~l--~g 83 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYNTG---KLNNVDIRY--------------------------------DFPL--NG 83 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEECCS---CEEEEEEEE--------------------------------EEEE--TT
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEccCC---CcccEEEec--------------------------------cccc--CC
Confidence 5666777889999999 88887776532 222222111 1111 22
Q ss_pred C---EEEEEe-c--CCeEEEEECC--CCcEEEEeeC------CC-CCeEEEEE--eCC-CC-EEEEEeCCCeEEEEeCC-
Q psy11350 293 R---FLGTCC-W--DHSWRLWDLN--QGQEVLHQEG------HG-KPVYCMSF--QGD-GS-VVATGGLDAFGRVWDLR- 352 (471)
Q Consensus 293 ~---~l~~~~-~--dg~i~iwd~~--~~~~~~~~~~------~~-~~v~~~~~--s~d-~~-~l~t~~~dg~i~iwd~~- 352 (471)
+ ++++.. . +++|.+|++. +++ +..+.. .. ..+..+|+ +|. +. ++++...+|.+..|++.
T Consensus 84 ~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~ 162 (355)
T 3amr_A 84 KKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKA 162 (355)
T ss_dssp EEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEE
T ss_pred ceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEe
Confidence 2 222333 3 4789999773 333 444421 11 45667777 774 44 68888889999999883
Q ss_pred ------CCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11350 353 ------TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 353 ------~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~ 394 (471)
+.+.+.++.. .+.+..+...+....|+.+-.+..|..++.+
T Consensus 163 ~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 163 DKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp CTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred CCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 3356666663 3578899999988899999988666666654
No 310
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.16 E-value=0.038 Score=51.94 Aligned_cols=161 Identities=9% Similarity=0.050 Sum_probs=99.8
Q ss_pred EecCCCEEEEEeCCCcEEEEeCCCCceEEEeecC----CCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCccee
Q psy11350 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGH----DCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLA 235 (471)
Q Consensus 160 ~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 235 (471)
.+.+|..|+.+- ++.||.-++......+.++.. -..|..+..+|.|. +|+.. .+..|.|-.+..+....
T Consensus 28 ~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~-----lLAl~-g~~~V~Vv~LP~~~~~~ 100 (452)
T 3pbp_A 28 SSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD-----LLCLF-NDNEIFVMEVPWGYSNV 100 (452)
T ss_dssp EETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS-----EEEEE-CSSEEEEEECCTTCSCC
T ss_pred EEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC-----EEEEe-cCCeEEEEEecCccccC
Confidence 456777777776 688888887754445555433 23678899999998 56555 45789999887432111
Q ss_pred eecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECC---CCCEEEEEecCCeEEEEECCCC
Q psy11350 236 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHP---SGRFLGTCCWDHSWRLWDLNQG 312 (471)
Q Consensus 236 ~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~~~~~dg~i~iwd~~~~ 312 (471)
.-... ...+.+-.| .+.. .......+|..+.||| .+..|++-..|+.|++||+...
T Consensus 101 ~~~~~-~~~~q~~ty----------------~l~~----~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 101 EDVSI-QDAFQIFHY----------------SIDE----EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp CCHHH-HHTTEEEEE----------------EGGG----CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred ccccc-ccccceeEE----------------EcCC----cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 10000 001111111 1111 1111245799999999 4568999999999999999852
Q ss_pred --cEEEEe---------eCCCCCeEEEEEeCCCCEEEEEe--CCCeEEEE
Q psy11350 313 --QEVLHQ---------EGHGKPVYCMSFQGDGSVVATGG--LDAFGRVW 349 (471)
Q Consensus 313 --~~~~~~---------~~~~~~v~~~~~s~d~~~l~t~~--~dg~i~iw 349 (471)
++. .+ ......|.+++|.+++-.|...+ ..|.|+-.
T Consensus 160 ~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 160 QEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 122 22 22336788999999887666644 77888643
No 311
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.12 E-value=0.02 Score=53.77 Aligned_cols=69 Identities=17% Similarity=0.230 Sum_probs=51.6
Q ss_pred CCCCeEEEEEeC---CCCEEEEEeCCCeEEEEeCCCC--eeEEEec---------ccCcCEEEEEEcCCCCEEEEEe--C
Q psy11350 321 HGKPVYCMSFQG---DGSVVATGGLDAFGRVWDLRTG--RCIMFLE---------GHLKSVFSVDFSPDGYHLATGS--E 384 (471)
Q Consensus 321 ~~~~v~~~~~s~---d~~~l~t~~~dg~i~iwd~~~~--~~~~~~~---------~h~~~v~~~~~sp~~~~l~s~s--~ 384 (471)
...+|..+.|+| .+..|++-..|+.|++||+... ++. .+. .....|.+++|.+++-.|+..+ .
T Consensus 123 ~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~ 201 (452)
T 3pbp_A 123 PKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTE 201 (452)
T ss_dssp CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTT
T ss_pred CCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCC
Confidence 357899999999 4678999999999999999852 222 232 2235789999999887777755 7
Q ss_pred CCcEEE
Q psy11350 385 DNAVKI 390 (471)
Q Consensus 385 dg~i~i 390 (471)
.|.|+-
T Consensus 202 ~GDIYA 207 (452)
T 3pbp_A 202 GGDIFA 207 (452)
T ss_dssp SCEEEE
T ss_pred CCCEEE
Confidence 787754
No 312
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.10 E-value=0.037 Score=50.41 Aligned_cols=220 Identities=10% Similarity=0.017 Sum_probs=107.3
Q ss_pred cCCCEEEEEeCC----CcEEEEeCCCCceEEEe--ecCCCCEEEEEEeeCCCCCCccEEEEEeC----C-----CcEEEE
Q psy11350 162 PDSQHVATASWS----GLCKLWTVPECELVQTF--RGHDCNVGAIEFHPLPSEGAVCSLASCAQ----D-----GSVKLW 226 (471)
Q Consensus 162 ~~~~~l~tg~~d----g~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~~~~~l~s~~~----d-----g~i~iw 226 (471)
-++.+++.|+.+ ..+.+||+.+.+-...- ......- +++.. ++. +++.|+. + ..+.+|
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~-----lyv~GG~~~~~~~~~~~~~~~~~ 95 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV-GGL-----LYAVGGRNNSPDGNTDSSALDCY 95 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTE-----EEEECCEEEETTEEEECCCEEEE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEEE-CCE-----EEEECCCcCCCCCCeecceEEEE
Confidence 356677777642 46889998776543321 1111111 22222 333 5566655 2 468889
Q ss_pred eCCCCcceeeecCCCCc-ceEEEEECCCCCEEEEEeCCCe------EEe------ccccccccCCCCcceEEEEECCCCC
Q psy11350 227 SLDKDTPLANLEGHEPF-RVSRIKFHPSGRFLGTCCWDHS------WRL------DTPLANLEGHEPFRVSRIKFHPSGR 293 (471)
Q Consensus 227 d~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~i~~~~~d~~------~~~------~~~~~~~~~~~~~~v~~l~~~~~~~ 293 (471)
|+.+.+-...-...... ....+.+ +++.++.|+.++. +.+ |.....+... ......+.+ ++.
T Consensus 96 d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~--~~~ 170 (308)
T 1zgk_A 96 NPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR-RIGVGVAVL--NRL 170 (308)
T ss_dssp ETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC-CBSCEEEEE--TTE
T ss_pred CCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc-ccceEEEEE--CCE
Confidence 98776532221111111 1222222 6677777664432 111 1111111111 111222333 566
Q ss_pred EEEEEecC-----CeEEEEECCCCcEEEEe--eCCCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEeCCCCeeEE--E
Q psy11350 294 FLGTCCWD-----HSWRLWDLNQGQEVLHQ--EGHGKPVYCMSFQGDGSVVATGGLD-----AFGRVWDLRTGRCIM--F 359 (471)
Q Consensus 294 ~l~~~~~d-----g~i~iwd~~~~~~~~~~--~~~~~~v~~~~~s~d~~~l~t~~~d-----g~i~iwd~~~~~~~~--~ 359 (471)
.++.|+.+ ..+.+||+.+.+-...- .........+.+ ++++++.|+.+ ..+.+||+.+.+-.. .
T Consensus 171 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 248 (308)
T 1zgk_A 171 LYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP 248 (308)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC
T ss_pred EEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCC
Confidence 77777654 45899998876433221 111111222222 67788888765 468999998764332 1
Q ss_pred ecccCcCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCcc
Q psy11350 360 LEGHLKSVFSVDFSPDGYHLATGSED-----NAVKIWDLRKRR 397 (471)
Q Consensus 360 ~~~h~~~v~~~~~sp~~~~l~s~s~d-----g~i~iwd~~~~~ 397 (471)
+.........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 249 ~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 249 MKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 2111111222222 56777777654 347788877654
No 313
>2dk4_A PRE-mRNA-splicing factor 18; SFM domain, HPRP18, structural NPPSFA, national project on protein structural and function analyses; NMR {Homo sapiens} SCOP: a.140.6.1
Probab=97.05 E-value=0.00054 Score=46.42 Aligned_cols=29 Identities=38% Similarity=0.496 Sum_probs=26.3
Q ss_pred ccCCChHHHHHHHHHhCCCcccccccccH
Q psy11350 79 NVSTDDNQVKLNLRQLGEPICLFGEEYSL 107 (471)
Q Consensus 79 ~~~~~~~~~~~~l~~~~~p~~~~~~~~s~ 107 (471)
.+++.+.+|+..||.+|+||++|||...-
T Consensus 24 ~v~~~d~eV~~~LR~lgEPi~LFGE~~~~ 52 (76)
T 2dk4_A 24 PMTLSRQEVIRRLRERGEPIRLFGETDYD 52 (76)
T ss_dssp SCCSCHHHHHHHHHHHTCCSSCTTCCHHH
T ss_pred CCCCCHHHHHHHHHHcCCCeeecCCChHH
Confidence 57899999999999999999999998554
No 314
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.04 E-value=0.17 Score=45.75 Aligned_cols=234 Identities=14% Similarity=0.176 Sum_probs=156.1
Q ss_pred EEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC-Ccceee
Q psy11350 158 CSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK-DTPLAN 236 (471)
Q Consensus 158 ~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~ 236 (471)
.-.+|..+.||.-. ..++.|+|+++...+..+.-. ..|.-=.|..... |+..+ +..|.-|++.. ..+.+.
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~------L~lVT-~taVyHWs~~~~s~P~kv 142 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT------VALVT-DNAVYHWSMEGESQPVKM 142 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSE------EEEEE-SSEEEEEESSTTCCCEEE
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCe------EEEEc-CCcEEEEcccCCCCCcee
Confidence 34588888887766 789999999999888887653 5777777766553 44444 46899999964 356666
Q ss_pred ecCCC---CcceEEEEECCCCCEEEEEeC---CCe----EEeccc----cccccCCCCcceEEEEECCCCC-----EEEE
Q psy11350 237 LEGHE---PFRVSRIKFHPSGRFLGTCCW---DHS----WRLDTP----LANLEGHEPFRVSRIKFHPSGR-----FLGT 297 (471)
Q Consensus 237 ~~~~~---~~~v~~~~~s~~~~~i~~~~~---d~~----~~~~~~----~~~~~~~~~~~v~~l~~~~~~~-----~l~~ 297 (471)
|..|. ...|.....+++.++++..+- ++. +.+... ...+.+| . ..-..+-.+|+ .|+.
T Consensus 143 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGh-a--a~F~~~~~~g~~~~~~lf~f 219 (365)
T 2xzh_A 143 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGH-A--ASFAQFKMEGNAEESTLFCF 219 (365)
T ss_dssp EECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCS-E--EEEEEECCTTCSSCEEEEEE
T ss_pred eecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeee-e--eeeEEEecCCCCCCceEEEE
Confidence 66543 347888888999998766543 332 333322 3345555 1 11122322322 3444
Q ss_pred Eec---CCeEEEEECCCC---c------EEEEeeCC---CCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecc
Q psy11350 298 CCW---DHSWRLWDLNQG---Q------EVLHQEGH---GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362 (471)
Q Consensus 298 ~~~---dg~i~iwd~~~~---~------~~~~~~~~---~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~ 362 (471)
+.. .+.++|.++... . .+..+... .+---++..++....++.-+.-|.|++||+.++.++..-+-
T Consensus 220 a~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrI 299 (365)
T 2xzh_A 220 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI 299 (365)
T ss_dssp EEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEecc
Confidence 433 268999998542 1 11112221 33345788888888899999999999999999999988776
Q ss_pred cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 363 HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 363 h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
....|..-+-+....=++.....|.|.--.++....+.-+.
T Consensus 300 S~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ivpyi~ 340 (365)
T 2xzh_A 300 SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYIT 340 (365)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHHHHHH
T ss_pred CCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEehhhh
Confidence 77788777766655556666788988888888887776554
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.02 E-value=0.043 Score=49.88 Aligned_cols=93 Identities=10% Similarity=0.064 Sum_probs=50.6
Q ss_pred CeEEEEECCCCcEEEEeeC-CCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEeCCCCeeEE--EecccCcCEEEEEEc
Q psy11350 302 HSWRLWDLNQGQEVLHQEG-HGKPVYCMSFQGDGSVVATGGLD-----AFGRVWDLRTGRCIM--FLEGHLKSVFSVDFS 373 (471)
Q Consensus 302 g~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~~~d-----g~i~iwd~~~~~~~~--~~~~h~~~v~~~~~s 373 (471)
..+.+||+.+.+-...-.. ....-.+++.. ++++++.|+.+ ..+.+||+.+.+-.. .+........++.+
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 246 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV- 246 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE-
T ss_pred ceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE-
Confidence 4588899887643222111 11111122222 66777777754 358899988764221 22211122233333
Q ss_pred CCCCEEEEEeCC-----CcEEEEECCCcc
Q psy11350 374 PDGYHLATGSED-----NAVKIWDLRKRR 397 (471)
Q Consensus 374 p~~~~l~s~s~d-----g~i~iwd~~~~~ 397 (471)
++++++.|+.+ ..+.+||+.+.+
T Consensus 247 -~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 247 -GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp -TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred -CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 66788888754 458888887764
No 316
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.98 E-value=0.29 Score=47.22 Aligned_cols=109 Identities=14% Similarity=0.093 Sum_probs=62.3
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEE--Eeec------CCCCEEEEEEeeCCCCCCccEEEEEeC-----
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ--TFRG------HDCNVGAIEFHPLPSEGAVCSLASCAQ----- 219 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~--~~~~------h~~~v~~l~~~~~~~~~~~~~l~s~~~----- 219 (471)
...++|+|.|+|+++++-...+.|++++..+++... .+.. .......|+|+|+-..... +.++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~-lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPY-IYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCE-EEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCE-EEEEEeccccCC
Confidence 456799999999977766544579998866555432 2221 2456779999996211111 2333221
Q ss_pred -------CCcEEEEeCCCC-------ccee-eecCCCCcceEEEEECCCCCEEEEEeC
Q psy11350 220 -------DGSVKLWSLDKD-------TPLA-NLEGHEPFRVSRIKFHPSGRFLGTCCW 262 (471)
Q Consensus 220 -------dg~i~iwd~~~~-------~~~~-~~~~~~~~~v~~~~~s~~~~~i~~~~~ 262 (471)
...|.-|++..+ +.+. .+..........++|.|||.++++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 134555554322 1111 122222225789999999997776553
No 317
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.97 E-value=0.26 Score=46.51 Aligned_cols=237 Identities=13% Similarity=0.169 Sum_probs=158.6
Q ss_pred EEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC-Ccceee
Q psy11350 158 CSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK-DTPLAN 236 (471)
Q Consensus 158 ~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~ 236 (471)
.-.+|..+.||.=. ..++.|+|+++...+..+.-. ..|.-=.|..... |+..+ +..|.-|++.. ..+.+.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis~~~------l~lVT-~taVyHWsi~~~s~P~kv 141 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNT------VALVT-DNAVYHWSMEGESQPVKM 141 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEETTE------EEEEC-SSEEEEEESSSSCCCEEE
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecCCCe------EEEEc-CCeeEEecccCCCCchhh
Confidence 34678888777665 789999999998888887654 4666777777653 44443 57899999964 356666
Q ss_pred ecCCC---CcceEEEEECCCCCEEEEEeC---CCe----EEecc----ccccccCCCCcceEEEEECCC---CCEEEEEe
Q psy11350 237 LEGHE---PFRVSRIKFHPSGRFLGTCCW---DHS----WRLDT----PLANLEGHEPFRVSRIKFHPS---GRFLGTCC 299 (471)
Q Consensus 237 ~~~~~---~~~v~~~~~s~~~~~i~~~~~---d~~----~~~~~----~~~~~~~~~~~~v~~l~~~~~---~~~l~~~~ 299 (471)
|..|. ...|.....+++.++++..+- ++. +.+.. ....+.+| ......+.+.-+ ...|+.+.
T Consensus 142 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGh-aa~F~~~~~~g~~~~~~lf~fa~ 220 (494)
T 1bpo_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGH-AASFAQFKMEGNAEESTLFCFAV 220 (494)
T ss_dssp EECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCS-EEEEEEEECTTCSSEEEEEEEEE
T ss_pred eecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheee-eeeeEEEecCCCCCCceEEEEEE
Confidence 66543 347888888999998875542 332 33322 23345566 212222222211 12444444
Q ss_pred cC---CeEEEEECCCC---c------EEEEeeC---CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccC
Q psy11350 300 WD---HSWRLWDLNQG---Q------EVLHQEG---HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364 (471)
Q Consensus 300 ~d---g~i~iwd~~~~---~------~~~~~~~---~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~ 364 (471)
.. +.++|.++... . .+..+.. -.+--.++..++....++.-+.-|.|++||+.++.++..-+-..
T Consensus 221 r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~ 300 (494)
T 1bpo_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 300 (494)
T ss_dssp CSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred ecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccC
Confidence 43 78999998543 1 1111111 13334588899988889999999999999999999998877677
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheecc
Q psy11350 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQ 404 (471)
Q Consensus 365 ~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 404 (471)
..|..-+-+....-++.....|.|.--.++....+.-+..
T Consensus 301 ~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ivpyi~~ 340 (494)
T 1bpo_A 301 ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITN 340 (494)
T ss_dssp SCEEEEEEETTTTEEEEEETTCEEEEEEECTTTHHHHHHH
T ss_pred CceEEecccCCCCcEEEEccCceEEEEEEccccchhhhhh
Confidence 7887777776666677777999998888888887765543
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.82 E-value=0.14 Score=47.51 Aligned_cols=163 Identities=13% Similarity=0.081 Sum_probs=93.5
Q ss_pred CCCcEEEEeCCCC--cce-eeecCC----CCcceEEEEECC--CCC-EEEEEeCC---Ce---EEecc------cccccc
Q psy11350 219 QDGSVKLWSLDKD--TPL-ANLEGH----EPFRVSRIKFHP--SGR-FLGTCCWD---HS---WRLDT------PLANLE 276 (471)
Q Consensus 219 ~dg~i~iwd~~~~--~~~-~~~~~~----~~~~v~~~~~s~--~~~-~i~~~~~d---~~---~~~~~------~~~~~~ 276 (471)
.+|.|.++|+.+. +.. ..+.+. .......+.+.+ ++. +|+++... .. +++.. ....+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6889999998743 211 122221 123566777655 454 45444332 22 22211 122333
Q ss_pred CCCCcceEEEEECCCCCEEEEEe-----------------cCCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEE
Q psy11350 277 GHEPFRVSRIKFHPSGRFLGTCC-----------------WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVAT 339 (471)
Q Consensus 277 ~~~~~~v~~l~~~~~~~~l~~~~-----------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t 339 (471)
+..-...+.+.+.++|.+.++.. ..|.|..+|.. +. ..+...-..-+.++|+||++.|+.
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~-~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DV-RVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CC-EEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eE-EEeecCCcccCcceECCCCCEEEE
Confidence 33334688999999998777653 12556666653 22 222222345689999999987766
Q ss_pred Ee-CCCeEEEEeCCC-Cee--EEEecccCcCEEEEEEcC-CCCEEEEEeCC
Q psy11350 340 GG-LDAFGRVWDLRT-GRC--IMFLEGHLKSVFSVDFSP-DGYHLATGSED 385 (471)
Q Consensus 340 ~~-~dg~i~iwd~~~-~~~--~~~~~~h~~~v~~~~~sp-~~~~l~s~s~d 385 (471)
+. ..+.|+.|++.. ++. ...+ ...+....+++.+ +|++.+++..+
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred EeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 64 578899999863 322 2233 2345678889988 58877766544
No 319
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.82 E-value=0.16 Score=45.96 Aligned_cols=104 Identities=14% Similarity=0.108 Sum_probs=55.5
Q ss_pred CCCEEEEEecC------CeEEEEECCCCcEEEEeeCC-CCCeEEEEEeCCCCEEEEEeC---------CCeEEEEeCCCC
Q psy11350 291 SGRFLGTCCWD------HSWRLWDLNQGQEVLHQEGH-GKPVYCMSFQGDGSVVATGGL---------DAFGRVWDLRTG 354 (471)
Q Consensus 291 ~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~d~~~l~t~~~---------dg~i~iwd~~~~ 354 (471)
++..++.|+.+ ..+.+||+.+.+-...-... ...-.+++. -++++++.|+. -..+.+||+.+.
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 45566666654 45888998876532221111 111112222 26677777764 345889999877
Q ss_pred eeEEE--ecccCcCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCcc
Q psy11350 355 RCIMF--LEGHLKSVFSVDFSPDGYHLATGSED-----NAVKIWDLRKRR 397 (471)
Q Consensus 355 ~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~d-----g~i~iwd~~~~~ 397 (471)
+-... +......-..+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 180 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 180 TWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred eEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 43221 2111111222223 56777777654 458899988764
No 320
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.80 E-value=0.61 Score=48.30 Aligned_cols=227 Identities=11% Similarity=0.023 Sum_probs=131.2
Q ss_pred CcCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEee----cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe
Q psy11350 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR----GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~----~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd 227 (471)
...|.++.-..+|. |-.|+.+| |..||-.+ ...+. .....|.++.....+ .|..|+.+| +..||
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~---~~~~~~~~~~~~~~i~~i~~d~~g------~lWigT~~G-l~~yd 88 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYS---TQQHFTYGENNNTRIYCGVIIDNT------YLYMGTDNG-ILVYN 88 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSC---EEECSCTTSTTSSCEEEEEEETTT------EEEEEETTE-EEEEE
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCc---eEEEEccCCCCCceEEEEEEcCCC------cEEEEeCCC-eEEEe
Confidence 46799998887774 55667666 66677432 22221 123568888776665 366676655 78899
Q ss_pred CCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccccc---c----cCCCCcceEEEEECCCCCEEEEEec
Q psy11350 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN---L----EGHEPFRVSRIKFHPSGRFLGTCCW 300 (471)
Q Consensus 228 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~---~----~~~~~~~v~~l~~~~~~~~l~~~~~ 300 (471)
..+.+.... .......|.++.. .+| .+.+++.+|.+.+...... + .......|.++....++...+ ++.
T Consensus 89 ~~~~~f~~~-~~~~~~~i~~i~~-~~g-~lWigt~~Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~ 164 (758)
T 3ott_A 89 YRADRYEQP-ETDFPTDVRTMAL-QGD-TLWLGALNGLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY 164 (758)
T ss_dssp TTTTEECCC-SCCCCSCEEEEEE-ETT-EEEEEETTEEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EET
T ss_pred CCCCEEECc-ccCCCceEEEEEe-cCC-cEEEEcCCcceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC
Confidence 876643221 1111224666654 344 5666666666544221111 1 111123588888887776544 554
Q ss_pred CCeEEEEECCCCcEEEEeeC-----CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCC
Q psy11350 301 DHSWRLWDLNQGQEVLHQEG-----HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD 375 (471)
Q Consensus 301 dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 375 (471)
. -|..+|..+++....... ....|.++...+++..|..|+. +-+..+|..+++...........|.++...++
T Consensus 165 ~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~ 242 (758)
T 3ott_A 165 N-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGN 242 (758)
T ss_dssp T-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTT
T ss_pred C-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCC
Confidence 4 588899877653321111 1234888888877765555553 45888998776533211112346888888888
Q ss_pred CCEEEEEeCCCcEEEEECCCccc
Q psy11350 376 GYHLATGSEDNAVKIWDLRKRRL 398 (471)
Q Consensus 376 ~~~l~s~s~dg~i~iwd~~~~~~ 398 (471)
|.+.+. +.+ -+.+++..+++.
T Consensus 243 g~lWig-T~~-Gl~~~~~~~~~~ 263 (758)
T 3ott_A 243 GDLLAG-TDN-GLYVYHNDTTPL 263 (758)
T ss_dssp CCEEEE-ETT-EEEEECCTTSCC
T ss_pred CCEEEE-eCC-ceeEEecCCCcE
Confidence 776554 444 578888776543
No 321
>1mzw_B U4/U6 snRNP 60KDA protein; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens}
Probab=96.79 E-value=0.00069 Score=37.27 Aligned_cols=20 Identities=65% Similarity=0.974 Sum_probs=17.9
Q ss_pred HHHHHHHhCCCccccccccc
Q psy11350 87 VKLNLRQLGEPICLFGEEYS 106 (471)
Q Consensus 87 ~~~~l~~~~~p~~~~~~~~s 106 (471)
|+..|+.+|+||++|||...
T Consensus 2 V~~~LR~lgePi~lFGE~~~ 21 (31)
T 1mzw_B 2 VKASLRALGEPITLFGEGPA 21 (31)
T ss_dssp HHHHHHHTTCCSEETTCCHH
T ss_pred HHHHHHHcCCCeeecCCChH
Confidence 67899999999999999854
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.63 E-value=0.13 Score=46.99 Aligned_cols=104 Identities=11% Similarity=0.133 Sum_probs=55.0
Q ss_pred CCCEEEEEec------CCeEEEEECCCCcEEEEeeCC-CCCeEEEEEeCCCCEEEEEeCCC-----eEEEEeCCCCeeEE
Q psy11350 291 SGRFLGTCCW------DHSWRLWDLNQGQEVLHQEGH-GKPVYCMSFQGDGSVVATGGLDA-----FGRVWDLRTGRCIM 358 (471)
Q Consensus 291 ~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~d~~~l~t~~~dg-----~i~iwd~~~~~~~~ 358 (471)
+++.++.|+. -..+.+||+.+.+-...-... ...-.+++.. ++++++.|+.++ .+.+||+.+.+-..
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 4455556654 145888898876432211111 1111122222 677888887654 58889988764332
Q ss_pred E--ecccCcCEEEEEEcCCCCEEEEEeCCC--------------cEEEEECCCcc
Q psy11350 359 F--LEGHLKSVFSVDFSPDGYHLATGSEDN--------------AVKIWDLRKRR 397 (471)
Q Consensus 359 ~--~~~h~~~v~~~~~sp~~~~l~s~s~dg--------------~i~iwd~~~~~ 397 (471)
. +.........+.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 227 ~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 227 FEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred CCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 2 2111112222333 567777777532 37788887764
No 323
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.56 E-value=0.42 Score=43.29 Aligned_cols=216 Identities=8% Similarity=0.108 Sum_probs=131.4
Q ss_pred CCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECC
Q psy11350 173 SGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHP 252 (471)
Q Consensus 173 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~ 252 (471)
+.+|.|.|+.++..+..-.-. --+.-.+|..+ .++.-. ..+++|+|+++.+.++.+.... .|.-=.|-.
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~---AdsAIMnP~~~-----ViALra-g~~LQiFnletK~klks~~~~e--~VvfWkWis 116 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPIS---ADSAIMNPASK-----VIALKA-GKTLQIFNIEMKSKMKAHTMTD--DVTFWKWIS 116 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECC---CSEEEECSSSS-----EEEEEE-TTEEEEEETTTTEEEEEEECSS--CEEEEEECS
T ss_pred CCEEEEEECCCCCCccccccc---cceeeeCCCcc-----EEEEec-CCeEEEechHHhhhhcceecCC--ccEEEEecC
Confidence 447889999876544322111 11344578776 455444 6889999999999888887765 455555654
Q ss_pred CCCEEEEEeCCCe--EEec---cccccccCC---CCcceEEEEECCCCCEEEEEec-------CCeEEEEECCCCcEEEE
Q psy11350 253 SGRFLGTCCWDHS--WRLD---TPLANLEGH---EPFRVSRIKFHPSGRFLGTCCW-------DHSWRLWDLNQGQEVLH 317 (471)
Q Consensus 253 ~~~~i~~~~~d~~--~~~~---~~~~~~~~~---~~~~v~~l~~~~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~ 317 (471)
+.. |+..+.... |.+. .|.+.+..| ....|..-..+++.++++..+- .|.+.+|..+.+ .-..
T Consensus 117 ~~~-L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ 194 (365)
T 2xzh_A 117 LNT-VALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQP 194 (365)
T ss_dssp SSE-EEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEE
T ss_pred CCe-EEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccce
Confidence 433 333333333 5442 232222222 1346778888999998765432 377899998764 4566
Q ss_pred eeCCCCCeEEEEEeC--CC-CEEEEEeC---CCeEEEEeCCCC---e------eEEEecc---cCcCEEEEEEcCCCCEE
Q psy11350 318 QEGHGKPVYCMSFQG--DG-SVVATGGL---DAFGRVWDLRTG---R------CIMFLEG---HLKSVFSVDFSPDGYHL 379 (471)
Q Consensus 318 ~~~~~~~v~~~~~s~--d~-~~l~t~~~---dg~i~iwd~~~~---~------~~~~~~~---h~~~v~~~~~sp~~~~l 379 (471)
+++|......+.+.. .. .+++.+.. .+.++|.++... . .+..+.. ..+-..++..++.-..+
T Consensus 195 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygvi 274 (365)
T 2xzh_A 195 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVV 274 (365)
T ss_dssp ECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEE
T ss_pred eeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEE
Confidence 777765543333321 11 13333322 257888887432 1 1111111 23456788888877788
Q ss_pred EEEeCCCcEEEEECCCccchhe
Q psy11350 380 ATGSEDNAVKIWDLRKRRLLKW 401 (471)
Q Consensus 380 ~s~s~dg~i~iwd~~~~~~~~~ 401 (471)
+.-+.-|.|.+||+.++.++..
T Consensus 275 yviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 275 FLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp EEEETTSEEEEEETTTCCEEEE
T ss_pred EEEeCCcEEEEEEcccCcEEEE
Confidence 8889999999999999999873
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.45 E-value=1.4 Score=47.93 Aligned_cols=233 Identities=12% Similarity=0.064 Sum_probs=118.6
Q ss_pred CcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEe---ccc--cccccCCCCcceEEEEECCC----
Q psy11350 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL---DTP--LANLEGHEPFRVSRIKFHPS---- 291 (471)
Q Consensus 221 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~---~~~--~~~~~~~~~~~v~~l~~~~~---- 291 (471)
..|++.+......+..+....+..|...+.+. ..++.++ ++.+.+ ... ...........|.|+++.|.
T Consensus 492 ~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~ 568 (1158)
T 3ei3_A 492 ASVRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSN 568 (1158)
T ss_dssp SCEEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSST
T ss_pred CEEEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCc
Confidence 34666766555556566555444566666553 3455554 333221 110 00011112346999999863
Q ss_pred --CCEEEEEec-CCeEEEEECCCCcEEEEeeCC-CCCeEEEEEeC--CCCEEEEEeCCCeEEEEeC--CCCeeEEE---e
Q psy11350 292 --GRFLGTCCW-DHSWRLWDLNQGQEVLHQEGH-GKPVYCMSFQG--DGSVVATGGLDAFGRVWDL--RTGRCIMF---L 360 (471)
Q Consensus 292 --~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~--d~~~l~t~~~dg~i~iwd~--~~~~~~~~---~ 360 (471)
+.++++|.. |++|+|+++.+.+.+....-. .....++.+.. ...+|..|-.||.+.-+.+ .+|..... +
T Consensus 569 ~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~ 648 (1158)
T 3ei3_A 569 GLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 648 (1158)
T ss_dssp TCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEE
T ss_pred ccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEE
Confidence 368999997 999999999987766543321 23445554432 3357888999998755544 45543321 2
Q ss_pred cccCcCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCccchhe---------ecccC-CC-ccceeeccccceeeeecccC
Q psy11350 361 EGHLKSVFSVDFSPDGY-HLATGSEDNAVKIWDLRKRRLLKW---------CTQLL-PN-SIGVTSLLTDLYIDVLESLN 428 (471)
Q Consensus 361 ~~h~~~v~~~~~sp~~~-~l~s~s~dg~i~iwd~~~~~~~~~---------~~~~~-~~-~~~~~~~~~d~~~~~~~~~~ 428 (471)
-| ..++.=..+...|. .++++| +.-..++--+ ++...+ +.... .. +-.++ +..+..+++.....
T Consensus 649 LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~~l~~s~l~~~~v~~~~~F~se~~~~g~v-~~~~~~LrI~~i~~ 724 (1158)
T 3ei3_A 649 LG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-HKLVFSNVNLKEVNYMCPLNSDGYPDSLA-LANNSTLTIGTIDE 724 (1158)
T ss_dssp CC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESS-SSEEEEEBSSSCCCEEEEECCSSSTTEEE-EECSSCEEEEEECC
T ss_pred cC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-CceEEeccChHHhceEeccCcccCCCcEE-EEcCCceEEEEecc
Confidence 22 23444333433333 233333 3333333322 222111 10000 00 11111 11122233222211
Q ss_pred CCcccccchhhhcccccceeeecccceeeeecCCeEEEeec
Q psy11350 429 PGIGNIISSALKEQVEPIPLLLDIQKLTFKFDSDLHAMVLN 469 (471)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~fs~dg~~lA~~~~ 469 (471)
..+-.++.++.....+.++++|+.+.++++..
T Consensus 725 ---------~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~ 756 (1158)
T 3ei3_A 725 ---------IQKLHIRTVPLYESPRKICYQEVSQCFGVLSS 756 (1158)
T ss_dssp ---------SSSEEEEEEECSSEEEEEEEEGGGTEEEEEEE
T ss_pred ---------cCCeeEEEEeCCCCceEEEEcCCCCEEEEEEE
Confidence 11234566777778899999999999988763
No 325
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.38 E-value=0.19 Score=45.40 Aligned_cols=181 Identities=10% Similarity=-0.007 Sum_probs=89.7
Q ss_pred cCCCEEEEEeCC-----CcEEEEeCCCCc---eEEE--eecCCCCEEEEEEeeCCCCCCccEEEEEeCC-----CcEEEE
Q psy11350 162 PDSQHVATASWS-----GLCKLWTVPECE---LVQT--FRGHDCNVGAIEFHPLPSEGAVCSLASCAQD-----GSVKLW 226 (471)
Q Consensus 162 ~~~~~l~tg~~d-----g~i~iwd~~~~~---~~~~--~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d-----g~i~iw 226 (471)
.++.+++.|+.+ ..+.+||+.+.+ -... +........++.+ ++. +++.|+.+ ..+.+|
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~-----lyv~GG~~~~~~~~~~~~~ 133 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDM-----IYVSGGFDGSRRHTSMERY 133 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTE-----EEEECCBCSSCBCCEEEEE
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCE-----EEEEcccCCCcccceEEEE
Confidence 356777777754 468999988765 3322 1111111112222 333 56666644 358889
Q ss_pred eCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCe------EEe------ccccccccCCCCcceEEEEECCCCCE
Q psy11350 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS------WRL------DTPLANLEGHEPFRVSRIKFHPSGRF 294 (471)
Q Consensus 227 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~------~~~------~~~~~~~~~~~~~~v~~l~~~~~~~~ 294 (471)
|+.+++-...-.......-.++.. -+++.++.|+.++. +.+ |.....+... ......+.+ ++..
T Consensus 134 d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~--~~~i 209 (301)
T 2vpj_A 134 DPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK-RSGAGVALL--NDHI 209 (301)
T ss_dssp ETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEE--TTEE
T ss_pred cCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc-cccceEEEE--CCEE
Confidence 987765332221111111112222 26777777765542 111 1111111111 111222222 5667
Q ss_pred EEEEecC-----CeEEEEECCCCcEEEEeeCC--CCCeEEEEEeCCCCEEEEEeCC-----CeEEEEeCCCCe
Q psy11350 295 LGTCCWD-----HSWRLWDLNQGQEVLHQEGH--GKPVYCMSFQGDGSVVATGGLD-----AFGRVWDLRTGR 355 (471)
Q Consensus 295 l~~~~~d-----g~i~iwd~~~~~~~~~~~~~--~~~v~~~~~s~d~~~l~t~~~d-----g~i~iwd~~~~~ 355 (471)
++.|+.+ ..+.+||+.+.+-...-... ......+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 210 ~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 210 YVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred EEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 7777664 46899999877533221111 111122222 67788888765 357888887654
No 326
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.25 E-value=0.18 Score=45.93 Aligned_cols=104 Identities=16% Similarity=0.216 Sum_probs=53.5
Q ss_pred CCCEEEEEec------CCeEEEEECCCCcEEEEee-CCCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEeCCCCeeEE
Q psy11350 291 SGRFLGTCCW------DHSWRLWDLNQGQEVLHQE-GHGKPVYCMSFQGDGSVVATGGLD-----AFGRVWDLRTGRCIM 358 (471)
Q Consensus 291 ~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~t~~~d-----g~i~iwd~~~~~~~~ 358 (471)
++..++.|+. -..+.+||+.+.+-...-. .....-.+++.. ++++++.|+.+ ..+.+||+.+.+-..
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 236 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEV 236 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEE
Confidence 4555555543 2358889988764322211 111111122222 66777777653 357789988764222
Q ss_pred --EecccCcCEEEEEEcCCCCEEEEEeCC--------------CcEEEEECCCcc
Q psy11350 359 --FLEGHLKSVFSVDFSPDGYHLATGSED--------------NAVKIWDLRKRR 397 (471)
Q Consensus 359 --~~~~h~~~v~~~~~sp~~~~l~s~s~d--------------g~i~iwd~~~~~ 397 (471)
.+.........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 237 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 237 MTEFPQERSSISLVSL--AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp CCCCSSCCBSCEEEEE--TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred CCCCCCcccceEEEEE--CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 22211111222222 56777777653 357788887654
No 327
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.18 E-value=0.89 Score=42.96 Aligned_cols=216 Identities=8% Similarity=0.110 Sum_probs=131.5
Q ss_pred CCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECC
Q psy11350 173 SGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHP 252 (471)
Q Consensus 173 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~ 252 (471)
...|.|.|+.++..+..-.- .--+.-.+|..+ .++.=. ..+++|+|+++.+.++.+....+ |.-=.|-.
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~-----iiALra-g~~lQiFnle~K~klks~~~~e~--VvfWkWis 115 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPI---SADSAIMNPASK-----VIALKA-GKTLQIFNIEMKSKMKAHTMTDD--VTFWKWIS 115 (494)
T ss_dssp CCEEEEEETTSTTSCEEEEC---CCSEEEECSSSS-----CEEEEE-TTEEEEEETTTTEEEEEEECSSC--CCEEEEEE
T ss_pred CCeEEEEECCCCCcceeccc---ccceeeeCCCCc-----EEEEec-CCeEEEEchHHhhhhcceecCCC--ceEEEecC
Confidence 44788999987654432211 112455677776 444443 78999999999998888876663 33334433
Q ss_pred CCCEEEEEeCCCe--EEec---cccccccCC---CCcceEEEEECCCCCEEEEEec-------CCeEEEEECCCCcEEEE
Q psy11350 253 SGRFLGTCCWDHS--WRLD---TPLANLEGH---EPFRVSRIKFHPSGRFLGTCCW-------DHSWRLWDLNQGQEVLH 317 (471)
Q Consensus 253 ~~~~i~~~~~d~~--~~~~---~~~~~~~~~---~~~~v~~l~~~~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~ 317 (471)
+ +.++..+.... |.+. .|...+..| ....|..-..+++.++++..+- .|.+.+|..+.+ .-..
T Consensus 116 ~-~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ 193 (494)
T 1bpo_A 116 L-NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQP 193 (494)
T ss_dssp T-TEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEE
T ss_pred C-CeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccch
Confidence 2 23333333333 4442 222222222 1346788888999998775432 477899998764 4556
Q ss_pred eeCCCCCeEEEEEeCCC---CEEEEEeC---CCeEEEEeCCCC---e------eEEEec---ccCcCEEEEEEcCCCCEE
Q psy11350 318 QEGHGKPVYCMSFQGDG---SVVATGGL---DAFGRVWDLRTG---R------CIMFLE---GHLKSVFSVDFSPDGYHL 379 (471)
Q Consensus 318 ~~~~~~~v~~~~~s~d~---~~l~t~~~---dg~i~iwd~~~~---~------~~~~~~---~h~~~v~~~~~sp~~~~l 379 (471)
++||......+.+..+. .+++.+.. .+.++|.++... . .+..+. ...+-..++..++.-..+
T Consensus 194 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygvi 273 (494)
T 1bpo_A 194 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVV 273 (494)
T ss_dssp ECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEE
T ss_pred heeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEE
Confidence 77776655444432211 23333332 378999988532 1 111111 123456788888887888
Q ss_pred EEEeCCCcEEEEECCCccchhe
Q psy11350 380 ATGSEDNAVKIWDLRKRRLLKW 401 (471)
Q Consensus 380 ~s~s~dg~i~iwd~~~~~~~~~ 401 (471)
+.-+.-|.|.+||+.++.++..
T Consensus 274 yviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 274 FLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp EEEETTSEEEEEETTTCCEEEE
T ss_pred EEEecCceEEEEecccceeeee
Confidence 8889999999999999998873
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.15 E-value=0.0077 Score=55.52 Aligned_cols=196 Identities=12% Similarity=0.008 Sum_probs=105.7
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEeecC-CCCEEEEEEeeCCCCCCccEEEEE-eCCCcEEEEeCCCCcceeeecCCCC
Q psy11350 165 QHVATASWSGLCKLWTVPECELVQTFRGH-DCNVGAIEFHPLPSEGAVCSLASC-AQDGSVKLWSLDKDTPLANLEGHEP 242 (471)
Q Consensus 165 ~~l~tg~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~ 242 (471)
.+++.++.||.|.-.|..+|+....+... ..++.... .+....... .++.. +.||.|..++..+|.....+....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~-~~~~~~~~~-~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~- 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQ-EPSRLETYE-TLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ- 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECC-CSCTTTSSE-EEEECCSTTTEEEEEETTTEEEEEEEEHHH-
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEec-CCccccCCc-EEEEEECCCCEEEEEECCCCcEEeeecccc-
Confidence 47889999999999999999999988753 12222211 011000001 23333 579999999987764332221100
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEE----EEE----CCCCCEEEEEecCCeEEEEECCCCcE
Q psy11350 243 FRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSR----IKF----HPSGRFLGTCCWDHSWRLWDLNQGQE 314 (471)
Q Consensus 243 ~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~----l~~----~~~~~~l~~~~~dg~i~iwd~~~~~~ 314 (471)
+.. ..++.. +.. ...+..+++|+.+|.+...|+.+|+.
T Consensus 88 --------------------------------lv~--~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 88 --------------------------------LVS--TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp --------------------------------HHT--TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred --------------------------------cee--ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 000 001110 000 01356788999999999999999999
Q ss_pred EEEeeCCC--CC-----eEEEEEe-----CCCCEEEEEeCCCeEEEEeCCCCeeEEEe-----cccCcC--EE-EEEEcC
Q psy11350 315 VLHQEGHG--KP-----VYCMSFQ-----GDGSVVATGGLDAFGRVWDLRTGRCIMFL-----EGHLKS--VF-SVDFSP 374 (471)
Q Consensus 315 ~~~~~~~~--~~-----v~~~~~s-----~d~~~l~t~~~dg~i~iwd~~~~~~~~~~-----~~h~~~--v~-~~~~sp 374 (471)
+..+.... .. ..|.... -.+..|+.|..+..+.+.+ ++|+ +..+ ..+... +. .-..+.
T Consensus 134 ~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~ 211 (339)
T 2be1_A 134 ISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSK 211 (339)
T ss_dssp EEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCS
T ss_pred EEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCC-eEEEeccccccccccccccccccccc
Confidence 98875321 11 1111111 1235677777777777666 4443 2111 110000 00 000112
Q ss_pred CCCEEEEEeCCCcEEEEECCCccchh
Q psy11350 375 DGYHLATGSEDNAVKIWDLRKRRLLK 400 (471)
Q Consensus 375 ~~~~l~s~s~dg~i~iwd~~~~~~~~ 400 (471)
|+.+ +.++.||.|.-+|..+|+.+.
T Consensus 212 Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 212 DGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp SSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred CCcE-EEECCCCEEEEEECCCCcEEE
Confidence 4666 457889999999999888763
No 329
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.09 E-value=0.043 Score=46.69 Aligned_cols=138 Identities=13% Similarity=0.082 Sum_probs=79.5
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCC--------EEEEEEeeCCCCCCccEEEEEeCCCcEE
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN--------VGAIEFHPLPSEGAVCSLASCAQDGSVK 224 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~--------v~~l~~~~~~~~~~~~~l~s~~~dg~i~ 224 (471)
..+..++|+|+|.+.++ .+|.++-.+..++....-+.. ... -.++.|.|++. |..+ .||.|.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~------LYav-~dG~iy 110 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGY------LYAV-SKDKLY 110 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSC------EEEE-ETTEEE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc-ccEecccccccceEEEECCCCC------EEEe-CCCEEE
Confidence 36779999999987666 588887777655222111111 112 36889999986 4444 679998
Q ss_pred EEeCCCCccee------eecCCCCcceEEEEECCCCCEEEEEeCCCeEEe-cccc---------ccccC-CCCcceEEEE
Q psy11350 225 LWSLDKDTPLA------NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPL---------ANLEG-HEPFRVSRIK 287 (471)
Q Consensus 225 iwd~~~~~~~~------~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~-~~~~---------~~~~~-~~~~~v~~l~ 287 (471)
-++-.+..... .+-...=..+..+.+.|+|.+.++. ++.+.. ..+. ....+ ..-.....+.
T Consensus 111 r~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~ 188 (236)
T 1tl2_A 111 KASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLF 188 (236)
T ss_dssp EESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEE
T ss_pred EeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEE
Confidence 88753322111 0101111267999999999999888 665432 2221 11111 1111344566
Q ss_pred ECCCCCEEEEEecCCeE
Q psy11350 288 FHPSGRFLGTCCWDHSW 304 (471)
Q Consensus 288 ~~~~~~~l~~~~~dg~i 304 (471)
|.+++..+++. +|.+
T Consensus 189 f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 189 FSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp ECTTSCEEEEE--TTEE
T ss_pred ECCCCcEEEEe--CCeE
Confidence 88888766665 6643
No 330
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.00 E-value=0.45 Score=51.82 Aligned_cols=235 Identities=13% Similarity=0.171 Sum_probs=141.7
Q ss_pred EEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCC-Ccceeee
Q psy11350 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK-DTPLANL 237 (471)
Q Consensus 159 ~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~ 237 (471)
-.+|..+.||.=. ..++.|+|+.+...+..+.- ..+|.-=.|..... |+..+ +..|.-|++.. ..+.+.|
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~------l~lVT-~~aVyHW~~~~~s~P~k~f 142 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNT------VALVT-DNAVYHWSMEGESQPVKMF 142 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCe------eEEEc-CCeEEEeccCCCCccHHHH
Confidence 3577777777655 78999999998877776654 34566666665553 43333 46799999964 3455555
Q ss_pred cCCC---CcceEEEEECCCCCEEEEEeC---C----CeEEecc----ccccccCCCCcceEEEEEC--C-CCCEEEEEec
Q psy11350 238 EGHE---PFRVSRIKFHPSGRFLGTCCW---D----HSWRLDT----PLANLEGHEPFRVSRIKFH--P-SGRFLGTCCW 300 (471)
Q Consensus 238 ~~~~---~~~v~~~~~s~~~~~i~~~~~---d----~~~~~~~----~~~~~~~~~~~~v~~l~~~--~-~~~~l~~~~~ 300 (471)
..|. ...|.....+++.++++..+- + |.+.+.+ ....+.+|.. ....+... + ....|+.+..
T Consensus 143 dR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~-~F~~~~~~~~~~~~~l~~f~~~ 221 (1630)
T 1xi4_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAA-SFAQFKMEGNAEESTLFCFAVR 221 (1630)
T ss_pred hcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHh-hhheeccCCCCCCceEEEEEEe
Confidence 5442 346778888999998775543 2 3333322 2233444411 12222221 1 1223333322
Q ss_pred ---CCeEEEEECCCC---cE------EEEeeCC---CCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCc
Q psy11350 301 ---DHSWRLWDLNQG---QE------VLHQEGH---GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365 (471)
Q Consensus 301 ---dg~i~iwd~~~~---~~------~~~~~~~---~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~ 365 (471)
.+.++|.++... .+ +..+.+. .+-..++..++....+..-+.-|.|.+||+.++.++..-+-...
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~ 301 (1630)
T 1xi4_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE 301 (1630)
T ss_pred cCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCC
Confidence 368999988543 11 1111111 22234677788777888888999999999999998876555556
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 366 ~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
+|...+-++...-++.....|.|.--.++....+.-+.
T Consensus 302 ~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~yi~ 339 (1630)
T 1xi4_A 302 TIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYIT 339 (1630)
T ss_pred ceEEeccCCCCCceEEEcCCceEEEEEEccchhhhhHh
Confidence 66665555443444555577777777777766665443
No 331
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.98 E-value=0.42 Score=46.54 Aligned_cols=228 Identities=11% Similarity=0.104 Sum_probs=131.9
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEeecC-------------------------CCCEE--EEEEeeCCCCCCccEEEEEeC
Q psy11350 167 VATASWSGLCKLWTVPECELVQTFRGH-------------------------DCNVG--AIEFHPLPSEGAVCSLASCAQ 219 (471)
Q Consensus 167 l~tg~~dg~i~iwd~~~~~~~~~~~~h-------------------------~~~v~--~l~~~~~~~~~~~~~l~s~~~ 219 (471)
+.+|+..|.|+|+-+++++.+..+... .+... .+++.. +......+++-.-.
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~td-g~yDGrylfiNdka 151 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTD-GKYDGKYLFINDKA 151 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEET-TEEEEEEEEEEETT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccC-CeeeeEEEEEecCC
Confidence 668889999999999999888775311 01111 222221 11111113333445
Q ss_pred CCcEEEEeCCCCcceeeecCCCCcceEEEEEC--CCCCEEEEEeCCCe--------EEecccc-----ccccCCC-----
Q psy11350 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH--PSGRFLGTCCWDHS--------WRLDTPL-----ANLEGHE----- 279 (471)
Q Consensus 220 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~i~~~~~d~~--------~~~~~~~-----~~~~~~~----- 279 (471)
+..|..-+++..++-..+.......+..+.|- |+..|++.++.... +.+..+. ..+....
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 67788888888888877777776688899886 78888888775432 1000000 0000000
Q ss_pred ----CcceEEEEECCCCCEEEEEecCC---------------eEEEEEC-------------------------CC----
Q psy11350 280 ----PFRVSRIKFHPSGRFLGTCCWDH---------------SWRLWDL-------------------------NQ---- 311 (471)
Q Consensus 280 ----~~~v~~l~~~~~~~~l~~~~~dg---------------~i~iwd~-------------------------~~---- 311 (471)
.+....+...+++.+.++.+.+. .+.++|+ +.
T Consensus 232 Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~ 311 (638)
T 3sbq_A 232 QVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGK 311 (638)
T ss_dssp EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTB
T ss_pred EEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccccc
Confidence 01122334456777777665531 2444443 22
Q ss_pred CcEEEEeeCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCCC------ee-------EEEecccCcCEEEEEEcCCCC
Q psy11350 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTG------RC-------IMFLEGHLKSVFSVDFSPDGY 377 (471)
Q Consensus 312 ~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~~------~~-------~~~~~~h~~~v~~~~~sp~~~ 377 (471)
+..+..+-.-......+.++|||+++++++ .+.++.|+|++.- +. ..... -.-.....+|.++|.
T Consensus 312 ~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~ 390 (638)
T 3sbq_A 312 DSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGN 390 (638)
T ss_dssp CCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSE
T ss_pred CCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCc
Confidence 111111111112234688999999888766 5788999998741 11 22222 234577889999996
Q ss_pred EEEEEeCCCcEEEEECCCc
Q psy11350 378 HLATGSEDNAVKIWDLRKR 396 (471)
Q Consensus 378 ~l~s~s~dg~i~iwd~~~~ 396 (471)
...|.--|..|.-|++...
T Consensus 391 aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 391 AYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp EEEEETTTTEEEEEEHHHH
T ss_pred eEeeeeecceEEEEeccHH
Confidence 5556668999999999753
No 332
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.93 E-value=0.67 Score=39.42 Aligned_cols=167 Identities=13% Similarity=0.059 Sum_probs=90.9
Q ss_pred EEEEEeCCCcEEEEeCCCCcc------eeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc---ccccCCCCcc-
Q psy11350 213 SLASCAQDGSVKLWSLDKDTP------LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL---ANLEGHEPFR- 282 (471)
Q Consensus 213 ~l~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~---~~~~~~~~~~- 282 (471)
+|+....| ++..=....+.. ...+-...=..+..++|+|+|.+.++ .....++...+. ....+. ...
T Consensus 6 ~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s-~t~I 82 (236)
T 1tl2_A 6 MLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGR-AKKI 82 (236)
T ss_dssp CEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHH-CEEE
T ss_pred EEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCccccccc-ccEe
Confidence 46666666 555444433331 11111111126779999999997777 443334443221 000011 112
Q ss_pred -------eEEEEECCCCCEEEEEecCCeEEEEECCCCcEE------EEe-eCCCCCeEEEEEeCCCCEEEEEeCCCeEEE
Q psy11350 283 -------VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV------LHQ-EGHGKPVYCMSFQGDGSVVATGGLDAFGRV 348 (471)
Q Consensus 283 -------v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~~~~------~~~-~~~~~~v~~~~~s~d~~~l~t~~~dg~i~i 348 (471)
..++.|.|+|.+.++ .||.|+-++-.+...- ..+ ..-=..+..|.|.|+|.+.++. |+.++-
T Consensus 83 G~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 83 GNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp ECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred cccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 378999999988777 5699988876432110 111 1112467899999999887776 777654
Q ss_pred EeCCCCe------eEEEec-ccCcCEEEEEEcCCCCEEEEEeCCCcE
Q psy11350 349 WDLRTGR------CIMFLE-GHLKSVFSVDFSPDGYHLATGSEDNAV 388 (471)
Q Consensus 349 wd~~~~~------~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~dg~i 388 (471)
+...++. ....+- ..-..-..+.|.|++.+.++. +|.+
T Consensus 159 ~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 159 ALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp ECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred cCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeE
Confidence 4333221 011111 222344557788888776665 6643
No 333
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.92 E-value=1.1 Score=41.65 Aligned_cols=194 Identities=13% Similarity=0.038 Sum_probs=104.7
Q ss_pred CCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCc-ceeeec--CCCCcceEEEEECCC---CCEEEEEeC----C-
Q psy11350 195 CNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT-PLANLE--GHEPFRVSRIKFHPS---GRFLGTCCW----D- 263 (471)
Q Consensus 195 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~--~~~~~~v~~~~~s~~---~~~i~~~~~----d- 263 (471)
.....++|.|++. |+.+..+|.|.+++. .+. .+..+. .........++++|+ +..|+++.. +
T Consensus 29 ~~P~~ia~~pdG~------l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 29 EVPWSIAPLGGGR------YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp SCEEEEEEEETTE------EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred CCCeEEEEcCCCe------EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 4567999999986 666677799999973 444 222221 112236889999998 555544432 1
Q ss_pred ----CeEEec--cc------c----ccccCCCCcceEEEEECCCCCEEEEEec-------------CCeEEEEECCCC--
Q psy11350 264 ----HSWRLD--TP------L----ANLEGHEPFRVSRIKFHPSGRFLGTCCW-------------DHSWRLWDLNQG-- 312 (471)
Q Consensus 264 ----~~~~~~--~~------~----~~~~~~~~~~v~~l~~~~~~~~l~~~~~-------------dg~i~iwd~~~~-- 312 (471)
..+++. .. . ..+..........|+|.|+|.++++.+. .|.|..++....
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred CcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 122221 11 0 0011111112467999999986665432 256666665432
Q ss_pred ------cEEEEeeCCCCCeEEEEEeC-CCCEEEEEeCCC---eEEEEeCCC----------------CeeEEEecccCcC
Q psy11350 313 ------QEVLHQEGHGKPVYCMSFQG-DGSVVATGGLDA---FGRVWDLRT----------------GRCIMFLEGHLKS 366 (471)
Q Consensus 313 ------~~~~~~~~~~~~v~~~~~s~-d~~~l~t~~~dg---~i~iwd~~~----------------~~~~~~~~~h~~~ 366 (471)
.......++.. ...++|+| ++.++++-...+ .|.+...-. ..++..+......
T Consensus 182 ~~npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~a 260 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWA 260 (354)
T ss_dssp TTSSSTTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred CCCCCCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence 11112234443 35799999 676655533222 233322100 0233333112346
Q ss_pred EEEEEEc-------CCCCEEEEEeCCCcEEEEECCCc
Q psy11350 367 VFSVDFS-------PDGYHLATGSEDNAVKIWDLRKR 396 (471)
Q Consensus 367 v~~~~~s-------p~~~~l~s~s~dg~i~iwd~~~~ 396 (471)
+..++|. .+|.++++.-..+.|...++...
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGG
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCC
Confidence 7888884 46777777666778888888753
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.87 E-value=1.4 Score=42.51 Aligned_cols=32 Identities=6% Similarity=-0.005 Sum_probs=22.3
Q ss_pred CCEEEEEEeeCCCCCCccEEEEEeCCC-cEEEEeCCCCc
Q psy11350 195 CNVGAIEFHPLPSEGAVCSLASCAQDG-SVKLWSLDKDT 232 (471)
Q Consensus 195 ~~v~~l~~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~ 232 (471)
...+.|+|.|++. |+.+...+ .|.+++..++.
T Consensus 27 ~~P~~~a~~pdG~------l~V~e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 27 NKPHALLWGPDNQ------IWLTERATGKILRVNPESGS 59 (454)
T ss_dssp SSEEEEEECTTSC------EEEEETTTCEEEEECTTTCC
T ss_pred CCceEEEEcCCCc------EEEEEcCCCEEEEEECCCCc
Confidence 4567999999997 44455554 68888765443
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.82 E-value=1 Score=40.72 Aligned_cols=93 Identities=10% Similarity=-0.072 Sum_probs=49.8
Q ss_pred CeEEEEECCCCcEEEEeeC-CCCCeEEEEEeCCCCEEEEEeC-C-----CeEEEEeCCCCeeEE--EecccCcCEEEEEE
Q psy11350 302 HSWRLWDLNQGQEVLHQEG-HGKPVYCMSFQGDGSVVATGGL-D-----AFGRVWDLRTGRCIM--FLEGHLKSVFSVDF 372 (471)
Q Consensus 302 g~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~~~-d-----g~i~iwd~~~~~~~~--~~~~h~~~v~~~~~ 372 (471)
..+.+||..+.+-...-.. ....-.+++. -++++++.|+. + ..+.+||+.+.+-.. .+......-.++.+
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 195 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH 195 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE
Confidence 3588889887643221111 1111112222 36677777776 2 468999988764322 12111111222233
Q ss_pred cCCCCEEEEEeCCC-----cEEEEECCCcc
Q psy11350 373 SPDGYHLATGSEDN-----AVKIWDLRKRR 397 (471)
Q Consensus 373 sp~~~~l~s~s~dg-----~i~iwd~~~~~ 397 (471)
++++++.|+.++ .+.+||+.+.+
T Consensus 196 --~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 196 --DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp --TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred --CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 667777877654 48889988764
No 336
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.81 E-value=0.62 Score=41.90 Aligned_cols=181 Identities=11% Similarity=0.035 Sum_probs=87.5
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCceEEEee--cCCCCEEEEEEeeCCCCCCccEEEEEeCCC-----cEEEEeCCC
Q psy11350 163 DSQHVATASWS-----GLCKLWTVPECELVQTFR--GHDCNVGAIEFHPLPSEGAVCSLASCAQDG-----SVKLWSLDK 230 (471)
Q Consensus 163 ~~~~l~tg~~d-----g~i~iwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~ 230 (471)
++.+++.|+.+ ..+.+||+.+.+-...-. .......++.+ ++. +++.|+.++ .+.+||+.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~-----iyv~GG~~~~~~~~~~~~~d~~~ 133 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGL-----LYAVGGFDGSTGLSSVEAYNIKS 133 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-----EEEEEEECSSCEEEEEEEEETTT
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCE-----EEEEcCCCCCccCceEEEEeCCC
Confidence 66777777754 358899987765333211 11111112222 333 566676553 477888877
Q ss_pred CcceeeecCCCCcceEEEEECCCCCEEEEEeCCCe--------EEe------ccccccccCCCCcceEEEEECCCCCEEE
Q psy11350 231 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--------WRL------DTPLANLEGHEPFRVSRIKFHPSGRFLG 296 (471)
Q Consensus 231 ~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~--------~~~------~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 296 (471)
++-...-.......-.+++. -+++.++.|+.++. +.+ |.....+... ......+.+ ++..++
T Consensus 134 ~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~--~~~iyv 209 (302)
T 2xn4_A 134 NEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR-RSGAGVGVL--NNLLYA 209 (302)
T ss_dssp TEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC-CBSCEEEEE--TTEEEE
T ss_pred CeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc-cccccEEEE--CCEEEE
Confidence 65333211111111112222 25666666654321 111 1111111111 111222222 567777
Q ss_pred EEecC-----CeEEEEECCCCcEEEEeeC-CCCCeEEEEEeCCCCEEEEEeCCC-----eEEEEeCCCCe
Q psy11350 297 TCCWD-----HSWRLWDLNQGQEVLHQEG-HGKPVYCMSFQGDGSVVATGGLDA-----FGRVWDLRTGR 355 (471)
Q Consensus 297 ~~~~d-----g~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~~~dg-----~i~iwd~~~~~ 355 (471)
.|+.+ ..+.+||+.+.+-...-.. ....-.+++. -++++++.|+.++ .+.+||+.+.+
T Consensus 210 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 210 VGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp ECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 77764 3689999987653322111 1111112222 2677888887653 47888887764
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.79 E-value=1.6 Score=42.62 Aligned_cols=191 Identities=12% Similarity=0.058 Sum_probs=104.0
Q ss_pred eCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCc--------------------------ceEEEEEC---CCC
Q psy11350 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPF--------------------------RVSRIKFH---PSG 254 (471)
Q Consensus 204 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--------------------------~v~~~~~s---~~~ 254 (471)
|.|....+..|.||+..|.|+|+-+.+++.+..+...... .-..+.+. -||
T Consensus 63 ~pG~~Deyy~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDG 142 (638)
T 3sbq_A 63 GPGELDDYYGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDG 142 (638)
T ss_dssp CTTCCCSEEEEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEE
T ss_pred CCCCcccEEEEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeee
Confidence 4455555657899999999999999988877766532211 11122222 245
Q ss_pred CEEEEEeCCCe----EEe--ccccccccCCCCcceEEEEEC--CCCCEEEEEec-------CCeE------------EEE
Q psy11350 255 RFLGTCCWDHS----WRL--DTPLANLEGHEPFRVSRIKFH--PSGRFLGTCCW-------DHSW------------RLW 307 (471)
Q Consensus 255 ~~i~~~~~d~~----~~~--~~~~~~~~~~~~~~v~~l~~~--~~~~~l~~~~~-------dg~i------------~iw 307 (471)
+++++-..... +++ ......+.......+.++.|. |+..|+++++. ||.. ...
T Consensus 143 rylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~i 222 (638)
T 3sbq_A 143 KYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAI 222 (638)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEE
T ss_pred EEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEE
Confidence 66666554433 222 122223334444567788886 67778877765 2221 112
Q ss_pred ECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCC---------------eEEEEeC---------------------
Q psy11350 308 DLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDA---------------FGRVWDL--------------------- 351 (471)
Q Consensus 308 d~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg---------------~i~iwd~--------------------- 351 (471)
|..+.+....+.- .+....+...++|.+.++.+.+. .+.++++
T Consensus 223 D~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ 301 (638)
T 3sbq_A 223 DAETMEMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTP 301 (638)
T ss_dssp ETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCC
T ss_pred cCCccEEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCee
Confidence 3333332222111 12233345567777777765322 2444543
Q ss_pred ----CC----CeeEEEecccCcCEEEEEEcCCCCEEEEEe-CCCcEEEEECCC
Q psy11350 352 ----RT----GRCIMFLEGHLKSVFSVDFSPDGYHLATGS-EDNAVKIWDLRK 395 (471)
Q Consensus 352 ----~~----~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s-~dg~i~iwd~~~ 395 (471)
+. +..+..+-.-......+..+|||++++.++ .+.++.++|+++
T Consensus 302 ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k 354 (638)
T 3sbq_A 302 VLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK 354 (638)
T ss_dssp EEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred EEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeeh
Confidence 22 111111111223456788999999987765 578899999985
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.62 E-value=0.17 Score=47.04 Aligned_cols=57 Identities=11% Similarity=-0.027 Sum_probs=30.7
Q ss_pred eEEEEeCCCCe--eEEEecccCcCEEEEEEcCCCCEEEEEeCCC------cEEEEECCCccchheec
Q psy11350 345 FGRVWDLRTGR--CIMFLEGHLKSVFSVDFSPDGYHLATGSEDN------AVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 345 ~i~iwd~~~~~--~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg------~i~iwd~~~~~~~~~~~ 403 (471)
.+.+||+.+.+ .+..+......-.++. .++++++.|+.++ .|.++++++++.+...+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEE--ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEE--eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 57889987653 3433332222222333 3678888888653 35666888888766444
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.43 E-value=1.5 Score=39.77 Aligned_cols=103 Identities=13% Similarity=0.087 Sum_probs=54.4
Q ss_pred CCCEEEEEecC-------CeEEEEECCCCcEEEEeeCCCCCe--EEEEEeCCCCEEEEEeC------CCeEEEEeCCCCe
Q psy11350 291 SGRFLGTCCWD-------HSWRLWDLNQGQEVLHQEGHGKPV--YCMSFQGDGSVVATGGL------DAFGRVWDLRTGR 355 (471)
Q Consensus 291 ~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~v--~~~~~s~d~~~l~t~~~------dg~i~iwd~~~~~ 355 (471)
++..++.|+.+ ..+.+||+.+.+-...- ....+. .+++. .++++++.|+. -..+.+||+.+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-NLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-CCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC-CCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 45556666543 34788888876433221 111111 12222 36777777764 2358999998774
Q ss_pred eEEE--ecccCcCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCcc
Q psy11350 356 CIMF--LEGHLKSVFSVDFSPDGYHLATGSED-----NAVKIWDLRKRR 397 (471)
Q Consensus 356 ~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~d-----g~i~iwd~~~~~ 397 (471)
-... +........++.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 187 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 3221 2111111222233 56777777654 347789988764
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.35 E-value=1.3 Score=45.37 Aligned_cols=106 Identities=10% Similarity=0.020 Sum_probs=60.6
Q ss_pred CCCEEEEEecCC--eEEEEECCCCcEEEEee-----CCCCCeEEEEEeCC-CCEEEEEeC--C-----CeEEEEeCCCCe
Q psy11350 291 SGRFLGTCCWDH--SWRLWDLNQGQEVLHQE-----GHGKPVYCMSFQGD-GSVVATGGL--D-----AFGRVWDLRTGR 355 (471)
Q Consensus 291 ~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~s~d-~~~l~t~~~--d-----g~i~iwd~~~~~ 355 (471)
++..++.|+.++ .+.+||..+.+-...-. .......++.+..+ +++++.|+. + +.+.+||+.+..
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 677777777654 68999998765332211 11122233555655 677777775 2 458899988776
Q ss_pred e-----EEEecc----cCcCEEEEEEcCCCCEEEEEeC--------CCcEEEEECCCcc
Q psy11350 356 C-----IMFLEG----HLKSVFSVDFSPDGYHLATGSE--------DNAVKIWDLRKRR 397 (471)
Q Consensus 356 ~-----~~~~~~----h~~~v~~~~~sp~~~~l~s~s~--------dg~i~iwd~~~~~ 397 (471)
- -..+.. ......++ ...++++++.||. ...|.+||+.+.+
T Consensus 580 w~~~~~W~~~~~~p~~~R~~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 580 ATEPITVIKKLQHPLFQRYGSQIK-YITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp SSCCEEEEEEEECGGGCCBSCEEE-EEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred cccceEEEEcCCCCCCCcccceEE-EeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 1 111111 11112223 3333677777774 3458899988765
No 341
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.30 E-value=0.52 Score=42.61 Aligned_cols=180 Identities=9% Similarity=0.010 Sum_probs=87.3
Q ss_pred CCCEEEEEeC----C-----CcEEEEeCCCCceEEEe--ecCCCCEEEEEEeeCCCCCCccEEEEEeCC-----CcEEEE
Q psy11350 163 DSQHVATASW----S-----GLCKLWTVPECELVQTF--RGHDCNVGAIEFHPLPSEGAVCSLASCAQD-----GSVKLW 226 (471)
Q Consensus 163 ~~~~l~tg~~----d-----g~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~~~~~l~s~~~d-----g~i~iw 226 (471)
++.+++.|+. + ..+.+||+.+.+-...- .........+.+ ++. +++.|+.+ ..+.+|
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~-----iyv~GG~~~~~~~~~~~~y 142 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGH-----IYAVGGSHGCIHHNSVERY 142 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTE-----EEEECCEETTEECCCEEEE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCE-----EEEEcCCCCCcccccEEEE
Confidence 5667777765 2 46889998776533221 111111112222 333 55665543 458889
Q ss_pred eCCCCcceeeecCCCCc-ceEEEEECCCCCEEEEEeCCCe------EEe------ccccccccCCCCcceEEEEECCCCC
Q psy11350 227 SLDKDTPLANLEGHEPF-RVSRIKFHPSGRFLGTCCWDHS------WRL------DTPLANLEGHEPFRVSRIKFHPSGR 293 (471)
Q Consensus 227 d~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~i~~~~~d~~------~~~------~~~~~~~~~~~~~~v~~l~~~~~~~ 293 (471)
|+.+++-...-...... ....+.+ ++..++.|+.++. +.+ |.....+... ......+.+ ++.
T Consensus 143 d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~--~~~ 217 (308)
T 1zgk_A 143 EPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTI-RSGAGVCVL--HNC 217 (308)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSC-CBSCEEEEE--TTE
T ss_pred CCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCc-cccceEEEE--CCE
Confidence 98776533221111111 1122222 6677777765532 111 1111111111 111222333 566
Q ss_pred EEEEEecC-----CeEEEEECCCCcEEEEeeCCC-CCeEEEEEeCCCCEEEEEeCC-----CeEEEEeCCCCe
Q psy11350 294 FLGTCCWD-----HSWRLWDLNQGQEVLHQEGHG-KPVYCMSFQGDGSVVATGGLD-----AFGRVWDLRTGR 355 (471)
Q Consensus 294 ~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~d~~~l~t~~~d-----g~i~iwd~~~~~ 355 (471)
.++.|+.+ ..+.+||+.+.+-...-.... ..-.+++.. ++++++.|+.+ ..+.+||+.+.+
T Consensus 218 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 218 IYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 77777664 469999998765332211111 111122222 66777887754 357788877653
No 342
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.29 E-value=0.98 Score=49.29 Aligned_cols=217 Identities=8% Similarity=0.083 Sum_probs=126.0
Q ss_pred CCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECC
Q psy11350 173 SGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHP 252 (471)
Q Consensus 173 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~ 252 (471)
..+|.|.|+.++..+..-. -.--+.-.+|..+ +++.- ...++.|+|+++.+.++.+.... .|.-=.|-.
T Consensus 47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~-----iiALr-ag~~lQiFnl~~k~klks~~~~e--~VvfWkWis 115 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASK-----VIALK-AGKTLQIFNIEMKSKMKAHTMTD--DVTFWKWIS 115 (1630)
T ss_pred CceEEEEECCCCCCccccc---ccchhhccCCCcc-----eEEEe-cCCeEEEeehHHhhhhcccccCC--CceEEEecC
Confidence 4478899988765442211 1112344677665 34443 47899999999988888777655 344445543
Q ss_pred CCC-EEEEEeCCCeEEec---cccccccCC---CCcceEEEEECCCCCEEEEEe-------cCCeEEEEECCCCcEEEEe
Q psy11350 253 SGR-FLGTCCWDHSWRLD---TPLANLEGH---EPFRVSRIKFHPSGRFLGTCC-------WDHSWRLWDLNQGQEVLHQ 318 (471)
Q Consensus 253 ~~~-~i~~~~~d~~~~~~---~~~~~~~~~---~~~~v~~l~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~ 318 (471)
... -+++...=-.|.+. .|...+..| ....|..-..+++.++++..+ -.|.+.+|..+.+ ....+
T Consensus 116 ~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~i 194 (1630)
T 1xi4_A 116 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPI 194 (1630)
T ss_pred CCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhh
Confidence 332 33333332336553 233333322 134577778888888877543 3478899998754 33445
Q ss_pred eCCCCCeEEEEEe--CC-CCEEEEEe---CCCeEEEEeCCCC---eeEE------Eecc---cCcCEEEEEEcCCCCEEE
Q psy11350 319 EGHGKPVYCMSFQ--GD-GSVVATGG---LDAFGRVWDLRTG---RCIM------FLEG---HLKSVFSVDFSPDGYHLA 380 (471)
Q Consensus 319 ~~~~~~v~~~~~s--~d-~~~l~t~~---~dg~i~iwd~~~~---~~~~------~~~~---h~~~v~~~~~sp~~~~l~ 380 (471)
.||......+... +. ..+++.+. ..+.++|.++... .+.. .+.. ..+-..++..++.-..++
T Consensus 195 egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy 274 (1630)
T 1xi4_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (1630)
T ss_pred hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEE
Confidence 6665554443332 11 12222222 1367888887542 1111 1111 123456777787777788
Q ss_pred EEeCCCcEEEEECCCccchhe
Q psy11350 381 TGSEDNAVKIWDLRKRRLLKW 401 (471)
Q Consensus 381 s~s~dg~i~iwd~~~~~~~~~ 401 (471)
.-+.-|.|.++|+.++.++..
T Consensus 275 ~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 275 LITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EEecCceEEEEecccchhhhh
Confidence 888999999999999998873
No 343
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.96 E-value=1.8 Score=40.01 Aligned_cols=29 Identities=17% Similarity=0.320 Sum_probs=22.3
Q ss_pred CCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeC
Q psy11350 195 CNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL 228 (471)
Q Consensus 195 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~ 228 (471)
.....|+|.|++. .|+.+...|.|++++.
T Consensus 18 ~~P~~i~~~pdG~-----~l~V~e~~G~i~~~~~ 46 (353)
T 2g8s_A 18 DHPWALAFLPDNH-----GMLITLRGGELRHWQA 46 (353)
T ss_dssp SSEEEEEECSTTC-----CEEEEETTTEEEEEET
T ss_pred CCcEEEEEcCCCC-----EEEEEeCCceEEEEeC
Confidence 3457999999986 2666677899999985
No 344
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.86 E-value=2.1 Score=38.56 Aligned_cols=207 Identities=11% Similarity=0.069 Sum_probs=115.3
Q ss_pred EecCCCEEEEEe--CCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEe-CC-------------CcE
Q psy11350 160 FSPDSQHVATAS--WSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA-QD-------------GSV 223 (471)
Q Consensus 160 ~s~~~~~l~tg~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~-~d-------------g~i 223 (471)
|+++|..|+... .++.|+..+..... ...+... .+--+++++. .|+-+. .+ ..|
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~-----~Iyy~~~~~~~~~~~~~~~~n~~~I 90 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND----TAMYINADKN-----YVYYVRNNNQKITSQTFFSYDRNSL 90 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE----EEEEEEECSS-----EEEEEEECC------CCSSCCSEEE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC----ceeeEEEcCC-----EEEEEECCCCcccccceeccCCCeE
Confidence 456777777664 25667777754333 3334321 2345577777 344443 32 357
Q ss_pred EEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEe--CCCe---EEe--c-cccccccCCCCcceEEEEECCCCCEE
Q psy11350 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC--WDHS---WRL--D-TPLANLEGHEPFRVSRIKFHPSGRFL 295 (471)
Q Consensus 224 ~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~--~d~~---~~~--~-~~~~~~~~~~~~~v~~l~~~~~~~~l 295 (471)
+..++..++... +... ....|++++++|+... .++. +++ . .....+..+ .+ ..|+|+++.|
T Consensus 91 y~i~~dg~~~~~-l~~~-----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~---~~--~~~~~~g~~i 159 (302)
T 3s25_A 91 CRIKRNGHGSTV-LDPD-----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNH---YL--FTCNTSDRYF 159 (302)
T ss_dssp EEEETTSCCCEE-EECS-----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESS---CC--CCSEEETTEE
T ss_pred EEEeCCCCcceE-eecC-----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCC---Cc--eEeeEECCEE
Confidence 777776554322 2211 1236788999888876 2333 222 1 122223222 12 4567788888
Q ss_pred EEEec-CCeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCC--CeEEEEeCCCCeeEEEecccCcCEEEEEE
Q psy11350 296 GTCCW-DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLD--AFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372 (471)
Q Consensus 296 ~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~d--g~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 372 (471)
+-.+. ...|.+.++..+.....+. +... ..+.|++.+|+-.... ..|..-++..... ..+.. ..+ ..|
T Consensus 160 y~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt~--~~~--~~~ 230 (302)
T 3s25_A 160 YYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLTE--ANI--EHY 230 (302)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECSC--SCE--EEE
T ss_pred EEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEeC--CCc--ceE
Confidence 76665 5789999987665443333 2222 3466888888766543 3677777765543 33432 233 337
Q ss_pred cCCCCEEEEEeC--CCcEEEEECCCc
Q psy11350 373 SPDGYHLATGSE--DNAVKIWDLRKR 396 (471)
Q Consensus 373 sp~~~~l~s~s~--dg~i~iwd~~~~ 396 (471)
+|++..|+-++. .+.|..-+++-.
T Consensus 231 ~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 231 NVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp EEETTEEEEEECSSSCEEEEEETTSC
T ss_pred EECCCEEEEEECCCCcEEEEEECCCC
Confidence 788888876533 356666676543
No 345
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.39 E-value=1.4 Score=40.72 Aligned_cols=21 Identities=0% Similarity=-0.214 Sum_probs=14.6
Q ss_pred CCCEEEEEeCC-CcEEEEeCCC
Q psy11350 163 DSQHVATASWS-GLCKLWTVPE 183 (471)
Q Consensus 163 ~~~~l~tg~~d-g~i~iwd~~~ 183 (471)
++.+++.|+.+ ..+.+||+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~ 40 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQA 40 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTS
T ss_pred CCEEEEEeCcCCCeEEEEcccc
Confidence 66666777643 5788999864
No 346
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.10 E-value=6.2 Score=40.69 Aligned_cols=234 Identities=9% Similarity=-0.027 Sum_probs=133.0
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEee-------cCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEE
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR-------GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL 225 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i 225 (471)
..|.++...++|.+. .|+. +-+.+++..+++...... -....|.++.....+. |-.|+..| +.+
T Consensus 232 ~~i~~i~~d~~g~lW-igT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~------lWiGT~~G-l~~ 302 (758)
T 3ott_A 232 NSIKSLALDGNGDLL-AGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN------IWLGTDYG-ISL 302 (758)
T ss_dssp EEEEEEEECTTCCEE-EEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC------EEEEESSS-EEE
T ss_pred CeEEEEEEcCCCCEE-EEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC------EEEEeCCc-ccc
Confidence 347777777776654 4554 458888877655433211 1234588888776665 55666666 555
Q ss_pred EeCCCCcceeee---c-CCCCcceEEEEECCCCCEEEEEeCCCeEEecccc------cccc------CCCCcceEEEEEC
Q psy11350 226 WSLDKDTPLANL---E-GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL------ANLE------GHEPFRVSRIKFH 289 (471)
Q Consensus 226 wd~~~~~~~~~~---~-~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~------~~~~------~~~~~~v~~l~~~ 289 (471)
+.....-..... . ......|.++.-..+|..-+. +.+|...+.... ..+. ......|.++.-.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d 381 (758)
T 3ott_A 303 SRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYED 381 (758)
T ss_dssp ECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEEC
T ss_pred cccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCcceeecccccccceeEEeccCCcCCCCCCCceEEEEEC
Confidence 443211111110 0 111236888888888776654 456665553221 0011 0112358888888
Q ss_pred CCCCEEEEEecCCeEEEEECCCCcEEEEee-C-----CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCC-----CeeE-
Q psy11350 290 PSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-G-----HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT-----GRCI- 357 (471)
Q Consensus 290 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~-----~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~-----~~~~- 357 (471)
++|+. ..|+ ++-|..||..+++...... . ....|.++...++|.+ -.|+..+-+.++|..+ ....
T Consensus 382 ~~g~l-Wigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-WigT~~~Gl~~~~~~~~~~~~~~~~~ 458 (758)
T 3ott_A 382 KEQQL-WIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQL-WISTCLGGIFVVDKHKLMQSTSGQYI 458 (758)
T ss_dssp TTSCE-EEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEE-EEEESSSCEEEEEHHHHHHCCSSEEE
T ss_pred CCCCE-EEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCE-EEEECCCceEEEccccccccCCccee
Confidence 77764 4455 4579999998875433211 1 2345888888777754 4466666688888542 1111
Q ss_pred --EEec---c-cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCccch
Q psy11350 358 --MFLE---G-HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399 (471)
Q Consensus 358 --~~~~---~-h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 399 (471)
..+. + ....|.++...++|.+.+.++..+-|..+|..+++..
T Consensus 459 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~ 506 (758)
T 3ott_A 459 AEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVT 506 (758)
T ss_dssp CSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEE
T ss_pred cccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceE
Confidence 1111 1 1235899999989887764444456888998776543
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.70 E-value=1.1 Score=45.85 Aligned_cols=72 Identities=10% Similarity=0.057 Sum_probs=38.8
Q ss_pred EEECCC-CCEEEEEec--C-----CeEEEEECCCCcE-----EEEe-e--CCCCCeEEEEEeCCCCEEEEEeCC------
Q psy11350 286 IKFHPS-GRFLGTCCW--D-----HSWRLWDLNQGQE-----VLHQ-E--GHGKPVYCMSFQGDGSVVATGGLD------ 343 (471)
Q Consensus 286 l~~~~~-~~~l~~~~~--d-----g~i~iwd~~~~~~-----~~~~-~--~~~~~v~~~~~s~d~~~l~t~~~d------ 343 (471)
+.+..+ +..++.|+. + +.+.+||+.+.+- -..+ . .....-.+++...++.+++.|+.+
T Consensus 544 ~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~ 623 (695)
T 2zwa_A 544 LEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFD 623 (695)
T ss_dssp EEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCC
T ss_pred EEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCC
Confidence 444443 455556654 2 4588889887661 1111 1 111111123333347788888743
Q ss_pred --CeEEEEeCCCCeeE
Q psy11350 344 --AFGRVWDLRTGRCI 357 (471)
Q Consensus 344 --g~i~iwd~~~~~~~ 357 (471)
..|.+||+.+.+-.
T Consensus 624 ~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 624 RTNSIISLDPLSETLT 639 (695)
T ss_dssp TTTSEEEEETTTTEEE
T ss_pred CCCeEEEEECCCCeEE
Confidence 45899999877543
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.11 E-value=6.5 Score=37.81 Aligned_cols=109 Identities=15% Similarity=0.118 Sum_probs=59.7
Q ss_pred CeEEEEEecCCC-EEEEEeCCCcEEEEeCCCC---ceEEEee---------cCCCCEEEEEEeeCCCCCCccEEEEEeC-
Q psy11350 154 PISYCSFSPDSQ-HVATASWSGLCKLWTVPEC---ELVQTFR---------GHDCNVGAIEFHPLPSEGAVCSLASCAQ- 219 (471)
Q Consensus 154 ~V~~~~~s~~~~-~l~tg~~dg~i~iwd~~~~---~~~~~~~---------~h~~~v~~l~~~~~~~~~~~~~l~s~~~- 219 (471)
.-+.|+|.|||. .|+++...|.|++++.... ..+..+. ........|+|+|+-..... +.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~-lYv~yt~~ 93 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK-LYVSYTTN 93 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE-EEEEEEEC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE-EEEEEeCC
Confidence 456889999996 5666677999999975422 1222221 11456789999996110001 2222221
Q ss_pred -C----------CcEEEEeCCCC----------cceeeec-CCCCcceEEEEECCCCCEEEEEeCC
Q psy11350 220 -D----------GSVKLWSLDKD----------TPLANLE-GHEPFRVSRIKFHPSGRFLGTCCWD 263 (471)
Q Consensus 220 -d----------g~i~iwd~~~~----------~~~~~~~-~~~~~~v~~~~~s~~~~~i~~~~~d 263 (471)
+ ..|.-|.+..+ +.+..+. ....-....|.|.|||.++++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 13444555321 1222222 1111246789999999877776654
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.08 E-value=0.46 Score=43.66 Aligned_cols=113 Identities=10% Similarity=-0.033 Sum_probs=73.9
Q ss_pred CEEEEEecCCeEEEEECCCCcEEEEeeCC-CCCeEEEEEe--C-CCCEEEEE-eCCCeEEEEeCCCCeeEEEecc----c
Q psy11350 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGH-GKPVYCMSFQ--G-DGSVVATG-GLDAFGRVWDLRTGRCIMFLEG----H 363 (471)
Q Consensus 293 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s--~-d~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~----h 363 (471)
..+++++.||.|.-+|..+|+....+... ..++....-. + ++..++.. +.||.|+.++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46889999999999999999988887654 1232221100 1 23333343 6899999999988855443321 1
Q ss_pred CcCEEE---EEE-c----CCCCEEEEEeCCCcEEEEECCCccchheeccc
Q psy11350 364 LKSVFS---VDF-S----PDGYHLATGSEDNAVKIWDLRKRRLLKWCTQL 405 (471)
Q Consensus 364 ~~~v~~---~~~-s----p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 405 (471)
..++.. ... . ..+..+++|+.+|.+.-.|+++|+.+..+...
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 122221 000 0 13567899999999999999999999887654
No 350
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.75 E-value=5.9 Score=36.39 Aligned_cols=201 Identities=11% Similarity=0.068 Sum_probs=104.2
Q ss_pred eecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcce--eeec---CCCCcceEEEEECCC---CCEEEEE-
Q psy11350 190 FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPL--ANLE---GHEPFRVSRIKFHPS---GRFLGTC- 260 (471)
Q Consensus 190 ~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~---~~~~~~v~~~~~s~~---~~~i~~~- 260 (471)
+...-...+.|+|.|++. ++++--..|.|++++...+... ..+. .........++++|+ +..|++.
T Consensus 27 va~gL~~P~~ia~~pdG~-----llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGD-----LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp EECCCSSEEEEEECTTSC-----EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred eecCCCCceEEEEcCCCc-----EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 333345678999999997 4554444899999986555432 2121 222346889999996 4444433
Q ss_pred e--CC-CeEEe--cc------c---cc----cccCCCCcceEEEEECCCCCEEEEEec-------------CCeEEEEEC
Q psy11350 261 C--WD-HSWRL--DT------P---LA----NLEGHEPFRVSRIKFHPSGRFLGTCCW-------------DHSWRLWDL 309 (471)
Q Consensus 261 ~--~d-~~~~~--~~------~---~~----~~~~~~~~~v~~l~~~~~~~~l~~~~~-------------dg~i~iwd~ 309 (471)
+ .+ ..+++ .. . .. .+..........|.|.|+|.++++.+. .|.|.-++.
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~ 181 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP 181 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence 2 11 12222 11 0 00 011101113456999999986666442 355665665
Q ss_pred CCC--------cEEEEeeCCCCCeEEEEEeCCCCEEEEEe-CCCeEEEEeCCCC------------------eeEEEecc
Q psy11350 310 NQG--------QEVLHQEGHGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTG------------------RCIMFLEG 362 (471)
Q Consensus 310 ~~~--------~~~~~~~~~~~~v~~~~~s~d~~~l~t~~-~dg~i~iwd~~~~------------------~~~~~~~~ 362 (471)
... .......+|.. ...++|+|+|.+.++-. .++.=.|--+..+ .++..+..
T Consensus 182 dG~ip~~nPf~~~~i~a~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~ 260 (347)
T 3das_A 182 DGEPAPGNPFPGSPVYSYGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWST 260 (347)
T ss_dssp TSSBCTTCSSTTCCEEEBCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECT
T ss_pred CCCccCCCCCCCCeEEeeCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCC
Confidence 422 11112234443 35799999887665532 2322222222221 12333332
Q ss_pred cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCcc
Q psy11350 363 HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397 (471)
Q Consensus 363 h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~ 397 (471)
+......++|. +|..++..-..+.|....+....
T Consensus 261 ~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~ 294 (347)
T 3das_A 261 DEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTA 294 (347)
T ss_dssp TTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTE
T ss_pred CCCCCcceEEE-cCceeeccccCCEEEEEEecCCc
Confidence 33466778887 45556555555666666665543
No 351
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=92.57 E-value=10 Score=38.76 Aligned_cols=230 Identities=9% Similarity=0.021 Sum_probs=119.3
Q ss_pred EEEE-EecCCCEEEEEe-CC----CcEEEEeCCCCceEE-Eee-cCCC------CEEEEEEeeCCCCCCccEEEEE----
Q psy11350 156 SYCS-FSPDSQHVATAS-WS----GLCKLWTVPECELVQ-TFR-GHDC------NVGAIEFHPLPSEGAVCSLASC---- 217 (471)
Q Consensus 156 ~~~~-~s~~~~~l~tg~-~d----g~i~iwd~~~~~~~~-~~~-~h~~------~v~~l~~~~~~~~~~~~~l~s~---- 217 (471)
..+. ++|++++++.+- .. ..++++|+.+++.+. .|. .-+. ....++|...+. ++++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~-----~~~~~~~~~ 206 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDT-----IIFNLVLHK 206 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTE-----EEECCCCST
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCE-----EEEEeCCCC
Confidence 3444 899999877542 22 379999999987663 122 0000 113458875543 33331
Q ss_pred ------eCCCcEEEEeCCCCc--ceeeecCCCCcceEEEEECCCCCE-----EEEEeCCCe----EEe--cc---ccccc
Q psy11350 218 ------AQDGSVKLWSLDKDT--PLANLEGHEPFRVSRIKFHPSGRF-----LGTCCWDHS----WRL--DT---PLANL 275 (471)
Q Consensus 218 ------~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~-----i~~~~~d~~----~~~--~~---~~~~~ 275 (471)
+....|+.|.+-+.. -...+.........+...++++++ +++.+.+.. +.+ .. ....+
T Consensus 207 ~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 286 (711)
T 4hvt_A 207 NEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKI 286 (711)
T ss_dssp TCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEEC
T ss_pred CCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEe
Confidence 122568888876553 223344433323345666777763 333332321 211 11 11122
Q ss_pred cCCCCcceEEEEECCCCCEEEEE----------ecCCeEEEEECCCCc-------EEEE-ee-CCCCCeEEEEEeCCCCE
Q psy11350 276 EGHEPFRVSRIKFHPSGRFLGTC----------CWDHSWRLWDLNQGQ-------EVLH-QE-GHGKPVYCMSFQGDGSV 336 (471)
Q Consensus 276 ~~~~~~~v~~l~~~~~~~~l~~~----------~~dg~i~iwd~~~~~-------~~~~-~~-~~~~~v~~~~~s~d~~~ 336 (471)
..... . .+..++.+.+++.. ...+.|.+.|+.++. .... +. .....+..+.+..+ .+
T Consensus 287 ~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l 362 (711)
T 4hvt_A 287 NMPSD--A-TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RV 362 (711)
T ss_dssp CSCTT--C-EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CE
T ss_pred ecCCc--c-eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EE
Confidence 22211 1 12334455444422 135678899987632 1222 22 23345778888865 57
Q ss_pred EEEEeCCCe--EEEEeCCCCe-eEEE-ecc-cCcCEEEEEEcCCCC-EEEEEeC---CCcEEEEECC
Q psy11350 337 VATGGLDAF--GRVWDLRTGR-CIMF-LEG-HLKSVFSVDFSPDGY-HLATGSE---DNAVKIWDLR 394 (471)
Q Consensus 337 l~t~~~dg~--i~iwd~~~~~-~~~~-~~~-h~~~v~~~~~sp~~~-~l~s~s~---dg~i~iwd~~ 394 (471)
+++...++. +.++|+.++. .... +.. ..+.+..+.+++++. ++++.+. -+.+..+|+.
T Consensus 363 ~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 363 FLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 777777764 6777876664 2222 221 134576677777654 4555443 3568888876
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=90.96 E-value=10 Score=35.37 Aligned_cols=214 Identities=13% Similarity=0.031 Sum_probs=103.6
Q ss_pred cCeEEEEEecC--CCEEEEEeCCCcEEEEeCCCCceEEEeec-------------------CCCCEEEEEEeeCCCCCCc
Q psy11350 153 RPISYCSFSPD--SQHVATASWSGLCKLWTVPECELVQTFRG-------------------HDCNVGAIEFHPLPSEGAV 211 (471)
Q Consensus 153 ~~V~~~~~s~~--~~~l~tg~~dg~i~iwd~~~~~~~~~~~~-------------------h~~~v~~l~~~~~~~~~~~ 211 (471)
..|.++++.|. ...|.+++..+.|...+ ..++.-..+.. ....+.+|.+.|....
T Consensus 115 ~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~--- 190 (394)
T 3b7f_A 115 DHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPK--- 190 (394)
T ss_dssp CEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTT---
T ss_pred cceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCC---
Confidence 36888999872 45566666566665554 22332222211 1235788999874322
Q ss_pred cEEEEEeCCCcEEEEeCCCCcceeeecCC-C-----------CcceEEEEECCC-CCEEEEEeCCCeEEecc------cc
Q psy11350 212 CSLASCAQDGSVKLWSLDKDTPLANLEGH-E-----------PFRVSRIKFHPS-GRFLGTCCWDHSWRLDT------PL 272 (471)
Q Consensus 212 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~-----------~~~v~~~~~s~~-~~~i~~~~~d~~~~~~~------~~ 272 (471)
.++.+..++.|...+ +.++.-..+... . ...+.++.+.|. ...+.++...+.++... ..
T Consensus 191 -~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D~G~tW~~~ 268 (394)
T 3b7f_A 191 -HLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRREGVWKRI 268 (394)
T ss_dssp -CEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEETTTTEEECG
T ss_pred -EEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeCCCCCcceEC
Confidence 255554444444332 223322222110 0 124889999986 35666666655544321 11
Q ss_pred cc-ccCCCCcceEEEEECC-CCCEEEEEec-----------CCeEEEEECCC-CcEEEEee-CCCC-------CeEEEEE
Q psy11350 273 AN-LEGHEPFRVSRIKFHP-SGRFLGTCCW-----------DHSWRLWDLNQ-GQEVLHQE-GHGK-------PVYCMSF 330 (471)
Q Consensus 273 ~~-~~~~~~~~v~~l~~~~-~~~~l~~~~~-----------dg~i~iwd~~~-~~~~~~~~-~~~~-------~v~~~~~ 330 (471)
.. +.......+.++.++| +...|+++.. ++...+|.... ++.-..+. +-.. ....+++
T Consensus 269 ~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~ 348 (394)
T 3b7f_A 269 GDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTA 348 (394)
T ss_dssp GGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEE
T ss_pred CCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEE
Confidence 11 1110012356788887 3344555432 23344554433 22222221 1110 1135788
Q ss_pred eCC-CCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEc
Q psy11350 331 QGD-GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFS 373 (471)
Q Consensus 331 s~d-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s 373 (471)
+|. ...|+.++.++.|..-+ ..++.-..+..+-..+.+++|.
T Consensus 349 ~p~~~~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 349 DAHAPVGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp CCSSSCCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred CCCCCCEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 873 44566666666655432 3344444444444567777764
No 353
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.80 E-value=8.8 Score=34.43 Aligned_cols=172 Identities=8% Similarity=-0.098 Sum_probs=92.4
Q ss_pred EEEecCCCEEEEEeCC--------------CcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEe--CCC
Q psy11350 158 CSFSPDSQHVATASWS--------------GLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA--QDG 221 (471)
Q Consensus 158 ~~~s~~~~~l~tg~~d--------------g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~--~dg 221 (471)
--|+++|.+|+.+... ..|+..++..++... +.. .. +..|++.+. .|+-.. .++
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~--~~--~~~~s~~g~-----~Iy~~~~~~~~ 127 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDP--DP--CIYASLIGN-----YIYYLHYDTQT 127 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EEC--SC--EEEEEEETT-----EEEEEEESSSS
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eec--CC--ccEEEEeCC-----EEEEEeecCCC
Confidence 4578999998876543 367777877665333 322 22 336778777 455544 334
Q ss_pred --cEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCC-CeEEe-c--cc-cccccCCCCcceEEEEECCCCCE
Q psy11350 222 --SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD-HSWRL-D--TP-LANLEGHEPFRVSRIKFHPSGRF 294 (471)
Q Consensus 222 --~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d-~~~~~-~--~~-~~~~~~~~~~~v~~l~~~~~~~~ 294 (471)
.|..-++.... ...+..+.. ..++++++.|+..+.. ..+.. . .. ...+... ... ..++|++.+
T Consensus 128 ~~~Iy~~~~dGs~-~~~lt~~~~-----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~ 197 (302)
T 3s25_A 128 ATSLYRIRIDGEE-KKKIKNHYL-----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTN 197 (302)
T ss_dssp CEEEEEEETTSCC-CEEEESSCC-----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEEETTE
T ss_pred CceEEEEECCCCC-eEEEeCCCc-----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCE
Confidence 45555554333 333333221 3457788887766652 22222 1 11 1111111 122 345688888
Q ss_pred EEEEecC--CeEEEEECCCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEe--CCCeEEEEeCCCC
Q psy11350 295 LGTCCWD--HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG--LDAFGRVWDLRTG 354 (471)
Q Consensus 295 l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~--~dg~i~iwd~~~~ 354 (471)
|+-.... ..|..-++..... ..+. ...+ ..|+|++.+|+-+. ..+.|..-++.-.
T Consensus 198 iy~t~~~~~~~I~~~~ldG~~~-~~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 198 VYYMDVNRDNAIVHVNINNPNP-VVLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp EEEEEGGGTTEEEEECSSSCCC-EECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred EEEEEcCCCcEEEEEECCCCCe-EEEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 8877654 3677777765542 2332 2233 34778888887653 3456777776543
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.45 E-value=7 Score=37.57 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=62.2
Q ss_pred ceEEEEECCCCC-EEEEEecCCeEEEEECCCC---cEEEEee---------CCCCCeEEEEEeCC----CCEEEEEeC--
Q psy11350 282 RVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQG---QEVLHQE---------GHGKPVYCMSFQGD----GSVVATGGL-- 342 (471)
Q Consensus 282 ~v~~l~~~~~~~-~l~~~~~dg~i~iwd~~~~---~~~~~~~---------~~~~~v~~~~~s~d----~~~l~t~~~-- 342 (471)
..+.|+|.|++. .|+++...|.|++++.... ..+..+. .....+..|+|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 367899999986 5666778899999975422 1222221 11456889999996 444343322
Q ss_pred C----------CeEEEEeCCC----------CeeEEEec--ccCcCEEEEEEcCCCCEEEEEeCCC
Q psy11350 343 D----------AFGRVWDLRT----------GRCIMFLE--GHLKSVFSVDFSPDGYHLATGSEDN 386 (471)
Q Consensus 343 d----------g~i~iwd~~~----------~~~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~dg 386 (471)
+ ..|.-|.+.. .+.+..+. .....-..|+|.|||.+.++.++.+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1344455532 22333332 1123467899999998877766543
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=88.75 E-value=15 Score=34.11 Aligned_cols=210 Identities=7% Similarity=-0.031 Sum_probs=113.8
Q ss_pred CcCeEEEEEecCCCEEE--EEeC-------------CCcEEEEeCCCC--ceEEEeecC------CCCEEEEEEe---eC
Q psy11350 152 TRPISYCSFSPDSQHVA--TASW-------------SGLCKLWTVPEC--ELVQTFRGH------DCNVGAIEFH---PL 205 (471)
Q Consensus 152 ~~~V~~~~~s~~~~~l~--tg~~-------------dg~i~iwd~~~~--~~~~~~~~h------~~~v~~l~~~---~~ 205 (471)
=-.|..+...+++++=+ +|-. .-.|.+||+.+. +.++.+.-. .+.+..+.+. |.
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~ 165 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPK 165 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTT
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCC
Confidence 34677777877665432 2311 125889999999 898887632 3567888888 22
Q ss_pred CCCCCccEEEEEeCCCcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEE
Q psy11350 206 PSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSR 285 (471)
Q Consensus 206 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~ 285 (471)
+........++-+..+.|.|+|+.+++.-+..... |.|+....+. -+|. ...+ ...+..
T Consensus 166 ~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~---------~~pd~~~~~~--i~G~------~~~~----~~Gi~g 224 (381)
T 3q6k_A 166 GDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT---------FKAERPTKFD--YGGK------EYEF----KAGIFG 224 (381)
T ss_dssp TTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG---------GSCCSCEEEE--ETTE------EEEE----CCCEEE
T ss_pred CCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC---------CccccCcceE--ECCE------EeEe----ccCceE
Confidence 11111113445456788999999988765544211 2233100000 0111 0001 235889
Q ss_pred EEECCC----CCEEEEEecCC-eEEEEE---CCCC---cEEEEe--eCCCCCeEEEEEe-CCCCEEEEEeCCCeEEEEeC
Q psy11350 286 IKFHPS----GRFLGTCCWDH-SWRLWD---LNQG---QEVLHQ--EGHGKPVYCMSFQ-GDGSVVATGGLDAFGRVWDL 351 (471)
Q Consensus 286 l~~~~~----~~~l~~~~~dg-~i~iwd---~~~~---~~~~~~--~~~~~~v~~~~~s-~d~~~l~t~~~dg~i~iwd~ 351 (471)
|+++|+ ++.|+.....+ .+.-.. ++.. ..+..+ .+....-..+++. .+|.++++--..+.|..|+.
T Consensus 225 IaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~ 304 (381)
T 3q6k_A 225 ITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNT 304 (381)
T ss_dssp EEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEET
T ss_pred EEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeC
Confidence 999997 77777766555 233332 1111 112222 1112334456775 57877777778889999998
Q ss_pred CC-C---eeEEEec--ccCcCEEEEEEcCCCCEEEEE
Q psy11350 352 RT-G---RCIMFLE--GHLKSVFSVDFSPDGYHLATG 382 (471)
Q Consensus 352 ~~-~---~~~~~~~--~h~~~v~~~~~sp~~~~l~s~ 382 (471)
.+ . .....+. ..-..+..+.+.++|.+.+..
T Consensus 305 ~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 305 QKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp TSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred CCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 75 1 1112221 122346777776666544444
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.59 E-value=13 Score=39.37 Aligned_cols=38 Identities=29% Similarity=0.373 Sum_probs=33.2
Q ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec
Q psy11350 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361 (471)
Q Consensus 324 ~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~ 361 (471)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46778888888999999999999999999999888753
No 357
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=82.71 E-value=25 Score=31.03 Aligned_cols=223 Identities=14% Similarity=0.012 Sum_probs=104.4
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcc
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP 233 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 233 (471)
.|..++.... ..++. . ||.|+.|-....-.+..-......|..|+..... .++. . ||.|..|-......
T Consensus 25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h------s~~l-~-~G~v~~wG~n~~Gq 93 (282)
T 3qhy_B 25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH------SLAL-K-DGEVIAWGGNEDGQ 93 (282)
T ss_dssp SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE------EEEE-E-TTEEEEEECCTTST
T ss_pred CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE------EEEE-E-CCEEEEeeCCCCCC
Confidence 4555554332 22333 4 8888888754321111000112356666654432 2444 4 89999997543222
Q ss_pred eeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccc----cccCCCCcceEEEEECCCCCEEEEEecCCeEEEEEC
Q psy11350 234 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA----NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDL 309 (471)
Q Consensus 234 ~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~----~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~ 309 (471)
+.. +......|..++....... .-. ++.+..+-... .........|..++..... .+.-. ||.|..|-.
T Consensus 94 lg~-P~~~~~~v~~ia~G~~hs~--al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~ 166 (282)
T 3qhy_B 94 TTV-PAEARSGVDAIAAGAWASY--ALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGD 166 (282)
T ss_dssp TCC-CGGGSSSEEEEEEETTEEE--EEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEEC
T ss_pred CCC-CcccCCCeEEEECcCCEEE--EEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecC
Confidence 111 1000114544444332222 222 44433321100 0111112347777665433 22334 799999976
Q ss_pred CCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEE
Q psy11350 310 NQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389 (471)
Q Consensus 310 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~ 389 (471)
.....+..-..-...|..++...+.. ++. .||.|+.|-......+..-......|..++...+ ..++. . ||.|.
T Consensus 167 n~~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~-h~~al-~-~g~v~ 240 (282)
T 3qhy_B 167 NYFGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEW-YSLAL-K-NGKVI 240 (282)
T ss_dssp CTTSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSS-CEEEE-E-TTEEE
T ss_pred CCCCCCCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCC-EEEEE-E-CCEEE
Confidence 54221111111134677777654433 333 5999999976543222111112245777766543 33333 3 99999
Q ss_pred EEECCCccchh
Q psy11350 390 IWDLRKRRLLK 400 (471)
Q Consensus 390 iwd~~~~~~~~ 400 (471)
.|-.....++.
T Consensus 241 ~wG~n~~gq~~ 251 (282)
T 3qhy_B 241 AWGSSRTAPSS 251 (282)
T ss_dssp EESTTCCCCGG
T ss_pred EecCCCCcccc
Confidence 99877655443
No 358
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=81.61 E-value=29 Score=31.13 Aligned_cols=181 Identities=13% Similarity=0.010 Sum_probs=107.6
Q ss_pred EEEEEeCCCcEEEEeCCCCc-------ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEe---cc-----------c
Q psy11350 213 SLASCAQDGSVKLWSLDKDT-------PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL---DT-----------P 271 (471)
Q Consensus 213 ~l~s~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~---~~-----------~ 271 (471)
++++.+.+|.|+--.+..-. -+..+....+..+..+........++..+..|.+.. .. +
T Consensus 10 ~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~ 89 (312)
T 1suu_A 10 IVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQN 89 (312)
T ss_dssp EEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CB
T ss_pred EEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcC
Confidence 68888999999987654221 122222222225555555556667777777776322 10 0
Q ss_pred c-ccccCCCCcceEEEEECC---CCCEEEEEecCCeEEEEECCCC-------cEEEEeeCCCCCeEEEEEeCCCCEEEEE
Q psy11350 272 L-ANLEGHEPFRVSRIKFHP---SGRFLGTCCWDHSWRLWDLNQG-------QEVLHQEGHGKPVYCMSFQGDGSVVATG 340 (471)
Q Consensus 272 ~-~~~~~~~~~~v~~l~~~~---~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~s~d~~~l~t~ 340 (471)
. ..+.......|..+...+ +..+|+..+..|.++...+... .....+.. ...+..+....++..++..
T Consensus 90 i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~ 168 (312)
T 1suu_A 90 ISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICL 168 (312)
T ss_dssp GGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEE
T ss_pred hhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEE
Confidence 0 011111223455543332 4678889999999999887432 22222333 4566666665556678888
Q ss_pred eCCCeEEEEeCCC---------CeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 341 GLDAFGRVWDLRT---------GRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 341 ~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
+.+|.+..+.... |.....+.. ...|.++...+++..+++.+..|..+...+..
T Consensus 169 T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 169 SKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp ETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred eCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 8999988887643 222223332 34566766665667788889999999888753
No 359
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=80.74 E-value=33 Score=31.09 Aligned_cols=165 Identities=12% Similarity=0.056 Sum_probs=89.0
Q ss_pred cCeEEE-EEec--CCCEEEEEeCCCcEEEEeCCCCce-------EEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCc
Q psy11350 153 RPISYC-SFSP--DSQHVATASWSGLCKLWTVPECEL-------VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGS 222 (471)
Q Consensus 153 ~~V~~~-~~s~--~~~~l~tg~~dg~i~iwd~~~~~~-------~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~ 222 (471)
..|.++ .+.. +..++++.+.+|.|+.-.+.+... ...++. ...+..+....... .++..+..|.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d-----~ill~T~~G~ 168 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGD-----DLLLVSANGQ 168 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTC-----EEEEEETTSE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCC-----EEEEEECCCe
Confidence 344444 4442 578999999999999988754321 122333 34454554444333 4777788888
Q ss_pred EEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecCC
Q psy11350 223 VKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 302 (471)
Q Consensus 223 i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg 302 (471)
+..+.....+ +.... .....+..+ .+ .....|.++...+++.+++..+..|
T Consensus 169 ~~rf~~~~~e-ip~~g-r~a~Gv~~i-------------------------~L--~~~d~Vv~~~~~~~~~~ll~~T~~G 219 (327)
T 3uc1_A 169 SIRFSATDEA-LRPMG-RATSGVQGM-------------------------RF--NIDDRLLSLNVVREGTYLLVATSGG 219 (327)
T ss_dssp EEEEECCTTT-SCCCC-TTSBCEESS-------------------------CC--CTTCCEEEEEECCTTCEEEEEETTS
T ss_pred EEEEECcccc-cCcCC-cCCCCeeee-------------------------cC--CCCCEEEEEEEECCCCEEEEEeCCC
Confidence 8887765201 10000 000011101 11 1123466666556667889999999
Q ss_pred eEEEEECCCC-------cEEEEee--CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCC
Q psy11350 303 SWRLWDLNQG-------QEVLHQE--GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352 (471)
Q Consensus 303 ~i~iwd~~~~-------~~~~~~~--~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~ 352 (471)
.++.-.+... +-+..+. ...+.+..+....+...++..+.+|.+.-++..
T Consensus 220 ~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 220 YAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred cEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 9988876432 1222222 213445555444444566666677777666654
No 360
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=80.51 E-value=53 Score=33.41 Aligned_cols=190 Identities=10% Similarity=-0.009 Sum_probs=95.2
Q ss_pred EEE-EeeCCCCCCccEEEEEeCCC----cEEEEeCCCCcceee-ecCCCCc------ceEEEEECCCCCEEEEEeCC---
Q psy11350 199 AIE-FHPLPSEGAVCSLASCAQDG----SVKLWSLDKDTPLAN-LEGHEPF------RVSRIKFHPSGRFLGTCCWD--- 263 (471)
Q Consensus 199 ~l~-~~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~-~~~~~~~------~v~~~~~s~~~~~i~~~~~d--- 263 (471)
.+. ++|++.. ++++-+..| .++++|+.+++.+.. +...... ....++|. +...++.+...
T Consensus 133 g~~~~~~~~~~----~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~ 207 (711)
T 4hvt_A 133 GVSNCFQNPNR----YLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKN 207 (711)
T ss_dssp EEEECSSSTTE----EEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTT
T ss_pred ceeecCCCCCE----EEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCC
Confidence 344 6777763 455544444 599999999876642 2211100 12445776 44444433211
Q ss_pred -----C---e---EEeccccc----cccCCCCcceEEEEECCCCCE-----EEEEecC---CeEEEEECCC--CcEEEEe
Q psy11350 264 -----H---S---WRLDTPLA----NLEGHEPFRVSRIKFHPSGRF-----LGTCCWD---HSWRLWDLNQ--GQEVLHQ 318 (471)
Q Consensus 264 -----~---~---~~~~~~~~----~~~~~~~~~v~~l~~~~~~~~-----l~~~~~d---g~i~iwd~~~--~~~~~~~ 318 (471)
+ . +++.++.. .+.+.....-.....++++++ +++.+.+ ..+.+.|... ++. ..+
T Consensus 208 ~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l 286 (711)
T 4hvt_A 208 EITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKI 286 (711)
T ss_dssp CBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EEC
T ss_pred CcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEe
Confidence 1 1 23333321 233322222334555666663 4433322 4567777653 332 222
Q ss_pred eCCCCCeEEEEEeCCCCEEEEE----------eCCCeEEEEeCCCCe-------eEEE-ec-ccCcCEEEEEEcCCCCEE
Q psy11350 319 EGHGKPVYCMSFQGDGSVVATG----------GLDAFGRVWDLRTGR-------CIMF-LE-GHLKSVFSVDFSPDGYHL 379 (471)
Q Consensus 319 ~~~~~~v~~~~~s~d~~~l~t~----------~~dg~i~iwd~~~~~-------~~~~-~~-~h~~~v~~~~~sp~~~~l 379 (471)
...... .+..+.++.+++.. ...+.|.+.|+.++. .... +. .....+..+.|..+ .++
T Consensus 287 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 287 NMPSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVF 363 (711)
T ss_dssp CSCTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEE
T ss_pred ecCCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEE
Confidence 222221 12334466555532 246678899987631 1222 22 23346788999866 677
Q ss_pred EEEeCCCc--EEEEECCCcc
Q psy11350 380 ATGSEDNA--VKIWDLRKRR 397 (471)
Q Consensus 380 ~s~s~dg~--i~iwd~~~~~ 397 (471)
++...++. |.++|+.+++
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp EEEEETTEEEEEEECEETTE
T ss_pred EEEEECCEEEEEEEECCCCc
Confidence 77777765 6677776664
No 361
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=79.64 E-value=32 Score=30.27 Aligned_cols=193 Identities=9% Similarity=-0.050 Sum_probs=106.8
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEE---eCCCCceEEEeecCCCCEEEEEEeeC-CCCCCccEEEEEeCCCcEEEEeC
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLW---TVPECELVQTFRGHDCNVGAIEFHPL-PSEGAVCSLASCAQDGSVKLWSL 228 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iw---d~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~~~~~l~s~~~dg~i~iwd~ 228 (471)
..+..+.-.....+|+.-+..|.++-- +++.+.....+. ....|..+.. ++ ... +++..+.+|.++-..+
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~----~~v~~T~~G~iKr~~l 97 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGN----RLLLATKKGYVKKIPL 97 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCS----EEEEEETTSEEEEEEG
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCC----EEEEEeCCCEEEEEEH
Confidence 456665555555667667778877654 333332111132 3456766644 32 111 6899999999999876
Q ss_pred CCCc----ceeeecCCCCcceEEEEECCCCCEEEEEeCCCeE-Eec--c---------ccccccCCCCcceEEEEECCCC
Q psy11350 229 DKDT----PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW-RLD--T---------PLANLEGHEPFRVSRIKFHPSG 292 (471)
Q Consensus 229 ~~~~----~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~-~~~--~---------~~~~~~~~~~~~v~~l~~~~~~ 292 (471)
..-. -...+....+..+..+........++..+..|.. ++. . ....+.-.....|..+...+++
T Consensus 98 ~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~ 177 (276)
T 3no0_A 98 AEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGE 177 (276)
T ss_dssp GGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSC
T ss_pred HHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCC
Confidence 4421 1222222233356666666667788888888873 331 1 0111111122356666555566
Q ss_pred CEEEEEecCCeEEEEECCCC-------cEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEE--EeCC
Q psy11350 293 RFLGTCCWDHSWRLWDLNQG-------QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRV--WDLR 352 (471)
Q Consensus 293 ~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~i--wd~~ 352 (471)
..++..+..|.++...+... +-+..+ ...+.+..+....+...++..+.+|.+.. ++..
T Consensus 178 ~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 178 PYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred CEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 78889999999998886432 223333 23344544443333345566666777666 6543
No 362
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=78.33 E-value=42 Score=30.99 Aligned_cols=209 Identities=11% Similarity=-0.023 Sum_probs=99.3
Q ss_pred CEEEEEeCCCcEEEEeCCC-CceEEEe--ecCCCCEEEEEEeeCCCCCCccEEEEEeCCC----cEEEEeCCCCcceeee
Q psy11350 165 QHVATASWSGLCKLWTVPE-CELVQTF--RGHDCNVGAIEFHPLPSEGAVCSLASCAQDG----SVKLWSLDKDTPLANL 237 (471)
Q Consensus 165 ~~l~tg~~dg~i~iwd~~~-~~~~~~~--~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~ 237 (471)
..|.+|+..| +.+++... +..-..+ ......|.+|++.|.... .|..++..| .|...+ +.++.-..+
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~----~l~~g~~~g~~g~gl~~s~-D~G~tW~~~ 96 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPE----RMLMAARTGHLGPTVFRSD-DGGGNWTEA 96 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTT----CEEEEEEC--CCEEEEEES-STTSCCEEC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCC----eEEEEecCCCCCccEEEeC-CCCCCceEC
Confidence 4677788777 55555432 2222221 123457999999983221 255555554 343332 233322221
Q ss_pred cC------C-------CCcceEEEEECCC--CCEEEEEeC-CCeEEec------ccccccc---------------CCCC
Q psy11350 238 EG------H-------EPFRVSRIKFHPS--GRFLGTCCW-DHSWRLD------TPLANLE---------------GHEP 280 (471)
Q Consensus 238 ~~------~-------~~~~v~~~~~s~~--~~~i~~~~~-d~~~~~~------~~~~~~~---------------~~~~ 280 (471)
.. . ....|.++++.|. ...+.++.. .+.++.. ....... ....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~ 176 (394)
T 3b7f_A 97 TRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDG 176 (394)
T ss_dssp SBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCC
T ss_pred CccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCC
Confidence 11 1 1125778899872 344554443 3334331 1111110 0112
Q ss_pred cceEEEEECCC-CCEEEEEecCCeEEEEECCCCcEEEEeeC-----C--------CCCeEEEEEeCC-CCEEEEEeCCCe
Q psy11350 281 FRVSRIKFHPS-GRFLGTCCWDHSWRLWDLNQGQEVLHQEG-----H--------GKPVYCMSFQGD-GSVVATGGLDAF 345 (471)
Q Consensus 281 ~~v~~l~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~--------~~~v~~~~~s~d-~~~l~t~~~dg~ 345 (471)
..+.+|.++|. ...|+++..++.|...+ ..++.-..+.. + ...+.++.+.|+ ...|+++...+
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g- 254 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG- 254 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-
Confidence 35789999983 45566665555554433 22222222110 0 124889999985 45666666544
Q ss_pred EEEEeCCCCeeEEEecc--cC---cCEEEEEEcC-CCCEEEEE
Q psy11350 346 GRVWDLRTGRCIMFLEG--HL---KSVFSVDFSP-DGYHLATG 382 (471)
Q Consensus 346 i~iwd~~~~~~~~~~~~--h~---~~v~~~~~sp-~~~~l~s~ 382 (471)
|...+ ..++.-..+.. .. ..+.+++++| +...|+.+
T Consensus 255 l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 255 IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred EEEeC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 54443 23333333221 11 2467788886 33444444
No 363
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=76.29 E-value=75 Score=32.79 Aligned_cols=145 Identities=11% Similarity=0.088 Sum_probs=72.9
Q ss_pred CcCeEEEEEecCC-CEEEEEeCCCcEEEEeCCCCceEEEeecC-------CCCEEEEEEeeCCCCCCccEEEEEeCCCc-
Q psy11350 152 TRPISYCSFSPDS-QHVATASWSGLCKLWTVPECELVQTFRGH-------DCNVGAIEFHPLPSEGAVCSLASCAQDGS- 222 (471)
Q Consensus 152 ~~~V~~~~~s~~~-~~l~tg~~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~~~~~l~s~~~dg~- 222 (471)
.+.|.+|+++|.. ..+++++..+.|...+ ..|+.-..+..+ ...|.+|++.|.... .++.+.....
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~----~i~~~~g~~~~ 88 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPD----RLYLAQGRYVG 88 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEE----EEEEEECSCTT
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCC----EEEEEeCccCC
Confidence 4689999999963 5667777677776665 344433333322 246999999985432 3444432211
Q ss_pred ---EEEE-eCCCCcceeeecCC-------CC-cceEEEEECCCC-CEEEEEe-CCCeEEe------ccccccccC--CCC
Q psy11350 223 ---VKLW-SLDKDTPLANLEGH-------EP-FRVSRIKFHPSG-RFLGTCC-WDHSWRL------DTPLANLEG--HEP 280 (471)
Q Consensus 223 ---i~iw-d~~~~~~~~~~~~~-------~~-~~v~~~~~s~~~-~~i~~~~-~d~~~~~------~~~~~~~~~--~~~ 280 (471)
-.|| ..+.|+.-..+... .. ..+..++++|.. ..++++. ..+.++. |........ ...
T Consensus 89 ~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 89 DEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp SSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEEESSTTSSCEEETTSCCCCSTT
T ss_pred CcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEEECCCCcccCCCccCccccCCC
Confidence 2333 33334322221110 00 134567777753 3444444 2233332 111111110 112
Q ss_pred cceEEEEECCC-CCEEEEEecC
Q psy11350 281 FRVSRIKFHPS-GRFLGTCCWD 301 (471)
Q Consensus 281 ~~v~~l~~~~~-~~~l~~~~~d 301 (471)
..+..+.++|. +..++++..+
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESS
T ss_pred CCeEEEEECCCCCCEEEEEEcC
Confidence 35788999984 4466666654
No 364
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.43 E-value=7.8 Score=41.16 Aligned_cols=39 Identities=15% Similarity=0.074 Sum_probs=34.2
Q ss_pred cCeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEee
Q psy11350 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR 191 (471)
Q Consensus 153 ~~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~ 191 (471)
..|.+++..++..+|++-+.|+++++|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 467788888899999999999999999999999887754
No 365
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=72.24 E-value=17 Score=39.39 Aligned_cols=38 Identities=21% Similarity=0.173 Sum_probs=31.6
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCccchheec
Q psy11350 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403 (471)
Q Consensus 366 ~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 403 (471)
.+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34556667788999999999999999999999888643
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=70.93 E-value=18 Score=35.91 Aligned_cols=58 Identities=26% Similarity=0.260 Sum_probs=42.6
Q ss_pred eEEEEEeCCCCEEEEEeCC------------CeEEEEeCCCCeeEEEecccC-cCEEEEEEcCCCCEEEEE
Q psy11350 325 VYCMSFQGDGSVVATGGLD------------AFGRVWDLRTGRCIMFLEGHL-KSVFSVDFSPDGYHLATG 382 (471)
Q Consensus 325 v~~~~~s~d~~~l~t~~~d------------g~i~iwd~~~~~~~~~~~~h~-~~v~~~~~sp~~~~l~s~ 382 (471)
.-.|+|+|.|.++++-..+ +.+.+.+..+++....+.++. ..++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4578999999977765432 245666777787666666554 579999999999988775
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=67.76 E-value=28 Score=34.24 Aligned_cols=61 Identities=23% Similarity=0.192 Sum_probs=43.9
Q ss_pred CCeEEEEEeCCCCEEEEEeC------------CCeEEEEeCCCCeeEEEeccc-CcCEEEEEEcCCCCEEEEEe
Q psy11350 323 KPVYCMSFQGDGSVVATGGL------------DAFGRVWDLRTGRCIMFLEGH-LKSVFSVDFSPDGYHLATGS 383 (471)
Q Consensus 323 ~~v~~~~~s~d~~~l~t~~~------------dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~sp~~~~l~s~s 383 (471)
.....|.|.++|.+.++... .+.|..++..+++....+.+. ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34568999999998774322 225777787778766555543 35699999999999887763
No 368
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=67.71 E-value=68 Score=28.62 Aligned_cols=180 Identities=11% Similarity=0.002 Sum_probs=99.2
Q ss_pred EEEEEeCCCcEEEEeCCCCcc-------eeeecCCCCcceEEEEECCCCCEEEEEeCCCe-EEec-------------cc
Q psy11350 213 SLASCAQDGSVKLWSLDKDTP-------LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-WRLD-------------TP 271 (471)
Q Consensus 213 ~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~-~~~~-------------~~ 271 (471)
++++.+.+|.|+--.+.+-+. +..+....+..+..+........++..+..|. +.+. .+
T Consensus 5 ~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~ 84 (307)
T 1zi0_A 5 VVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRP 84 (307)
T ss_dssp EEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEE
T ss_pred EEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeE
Confidence 578888899988776543211 11111112224555555555666666666666 2221 01
Q ss_pred cc-cccCCCCcceEEEEE-C--CCCCEEEEEecCCeEEEEECCCC-------cEEEEeeCCCCCeEEEEEeCCCCEEEEE
Q psy11350 272 LA-NLEGHEPFRVSRIKF-H--PSGRFLGTCCWDHSWRLWDLNQG-------QEVLHQEGHGKPVYCMSFQGDGSVVATG 340 (471)
Q Consensus 272 ~~-~~~~~~~~~v~~l~~-~--~~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~s~d~~~l~t~ 340 (471)
.. .+.......|.++.. . .++.+++..+..|.++...+... .....+..+ +.+..+....+...++..
T Consensus 85 i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~ 163 (307)
T 1zi0_A 85 IVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLF 163 (307)
T ss_dssp GGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEE
T ss_pred hhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEE
Confidence 11 111112234555543 2 35668999999999999977421 111223333 555555555555677778
Q ss_pred eCCCeEEEEeCCC---------CeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11350 341 GLDAFGRVWDLRT---------GRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 341 ~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~ 394 (471)
+.+|.+..++... |.....+. ....|.++...+++..+++.+..|.++-.++.
T Consensus 164 T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 164 SAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp ETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred CCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 8888887776532 22222232 23457777655556778888999999888763
No 369
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=66.75 E-value=18 Score=39.31 Aligned_cols=38 Identities=29% Similarity=0.373 Sum_probs=31.7
Q ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec
Q psy11350 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361 (471)
Q Consensus 324 ~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~ 361 (471)
.+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34456667788899999999999999999999988753
No 370
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=65.46 E-value=76 Score=28.37 Aligned_cols=185 Identities=8% Similarity=-0.019 Sum_probs=103.8
Q ss_pred ecCCCEEEEEeCCCcEEEEeCCCCce-------EE--EeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCC--
Q psy11350 161 SPDSQHVATASWSGLCKLWTVPECEL-------VQ--TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD-- 229 (471)
Q Consensus 161 s~~~~~l~tg~~dg~i~iwd~~~~~~-------~~--~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~-- 229 (471)
-|+..++++.+.+|.|+--.+.+.+. +. .++.. ..+..+....... .++..+..|.+.-....
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~-----~ll~~T~~G~~~~~~~~~i 78 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHD-----YLFMISNEGKLYLINAYEI 78 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTC-----EEEEEETTSEEEEEEGGGS
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCC-----EEEEEECCCeEEEEEHHHC
Confidence 35667889999999999887654321 11 12222 3344444444443 47777888887666542
Q ss_pred -C------Cccee-eecCCCCcceEEEEECC---CCCEEEEEeCCCeEEecc----------ccccccCCCCcceEEEEE
Q psy11350 230 -K------DTPLA-NLEGHEPFRVSRIKFHP---SGRFLGTCCWDHSWRLDT----------PLANLEGHEPFRVSRIKF 288 (471)
Q Consensus 230 -~------~~~~~-~~~~~~~~~v~~~~~s~---~~~~i~~~~~d~~~~~~~----------~~~~~~~~~~~~v~~l~~ 288 (471)
. |.++. .+....+..|..+...+ +..+++..+..|...... ....+.-.....+..+..
T Consensus 79 p~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~ 158 (312)
T 1suu_A 79 KDSSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEI 158 (312)
T ss_dssp CC-------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEE
T ss_pred CCCCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEE
Confidence 2 11111 11222222455554332 467788888888854311 111111222334555555
Q ss_pred CCCCCEEEEEecCCeEEEEECCCC---------cEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCC
Q psy11350 289 HPSGRFLGTCCWDHSWRLWDLNQG---------QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352 (471)
Q Consensus 289 ~~~~~~l~~~~~dg~i~iwd~~~~---------~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~ 352 (471)
......++..+.+|.+..+....- .....+. ....|.++...+++..+++.+..|..+..++.
T Consensus 159 ~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 159 VFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp ECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred eCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 555667888999999999987531 1122222 24556666665566678888889998888774
No 371
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=65.45 E-value=75 Score=28.32 Aligned_cols=227 Identities=10% Similarity=0.035 Sum_probs=118.2
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCCceEE---------EeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe---CC
Q psy11350 162 PDSQHVATASWSGLCKLWTVPECELVQ---------TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS---LD 229 (471)
Q Consensus 162 ~~~~~l~tg~~dg~i~iwd~~~~~~~~---------~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd---~~ 229 (471)
|+..++++.+.+|.|+--.+.+.+..+ .++.+ ..+..+....... .|+..+..|.+.-.. +.
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~-----~ll~fT~~G~~~~~~~~elp 74 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHD-----HILCFSSRGRVYSMKVYQLP 74 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTC-----EEEEEETTSEEEEEEGGGSC
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCC-----EEEEEECCCEEEEEEhhHCc
Confidence 355678889999999887765433221 12222 3333433333333 466777778755543 33
Q ss_pred C------Ccceee-ecCCCCcceEEEEE-C--CCCCEEEEEeCCCeEEeccc----------cccccCCCCcceEEEEEC
Q psy11350 230 K------DTPLAN-LEGHEPFRVSRIKF-H--PSGRFLGTCCWDHSWRLDTP----------LANLEGHEPFRVSRIKFH 289 (471)
Q Consensus 230 ~------~~~~~~-~~~~~~~~v~~~~~-s--~~~~~i~~~~~d~~~~~~~~----------~~~~~~~~~~~v~~l~~~ 289 (471)
. |.++.. +....+..|..+.. . +++.+++..+..|.+..... ...+.-.....+..+...
T Consensus 75 ~~~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~ 154 (307)
T 1zi0_A 75 EATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLT 154 (307)
T ss_dssp CCCSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEE
T ss_pred CCCCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEe
Confidence 2 222221 12222335555543 2 45678899999998554211 111111112345555554
Q ss_pred CCCCEEEEEecCCeEEEEECCCCc-------EEE--EeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCC------
Q psy11350 290 PSGRFLGTCCWDHSWRLWDLNQGQ-------EVL--HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG------ 354 (471)
Q Consensus 290 ~~~~~l~~~~~dg~i~iwd~~~~~-------~~~--~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~------ 354 (471)
.....++..+.+|.+..+....-. -+. .+. ....|.++...+++..+++.+..|.++-.++..-
T Consensus 155 ~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg 233 (307)
T 1zi0_A 155 SGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRA 233 (307)
T ss_dssp CTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTT
T ss_pred CCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCC
Confidence 555678888889998888764311 111 222 2455666665555667888889999888876321
Q ss_pred ---eeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 355 ---RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 355 ---~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
.....+..-.+.+..+....+...++..+.+|.+.-+.+..
T Consensus 234 ~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 234 TKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp SCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred CCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 11112222224555544433445555666677766555543
No 372
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=61.83 E-value=99 Score=28.46 Aligned_cols=228 Identities=11% Similarity=0.035 Sum_probs=120.9
Q ss_pred ecCCCEEEEEeCCCcEEEEeCCC---------CceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe---C
Q psy11350 161 SPDSQHVATASWSGLCKLWTVPE---------CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS---L 228 (471)
Q Consensus 161 s~~~~~l~tg~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd---~ 228 (471)
-|+..++++.+.+|.|+--.+.+ +.....++. ...+..+....... .|+..+..|.+.-+. +
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d-----~ll~fT~~G~~~~~~~~ei 77 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHD-----TLLTFTSSGKVFWLPVHQL 77 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTC-----EEEEEETTSEEEEEEGGGS
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCC-----EEEEEeCCCeEEEEEHHHC
Confidence 46778999999999999865432 222233333 34555555444443 466667778765544 4
Q ss_pred CC------Ccceee-ecCCCCcceEEEEEC---CCCCEEEEEeCCCeEEecc----------ccccccCCCCcceEEEEE
Q psy11350 229 DK------DTPLAN-LEGHEPFRVSRIKFH---PSGRFLGTCCWDHSWRLDT----------PLANLEGHEPFRVSRIKF 288 (471)
Q Consensus 229 ~~------~~~~~~-~~~~~~~~v~~~~~s---~~~~~i~~~~~d~~~~~~~----------~~~~~~~~~~~~v~~l~~ 288 (471)
.. |.++.. +....+..|.++... .++.+++.++..|.+.... ....+.-.....+-.+..
T Consensus 78 p~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~ 157 (370)
T 3l6v_A 78 PEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVAL 157 (370)
T ss_dssp CBCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEE
T ss_pred cCCCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEE
Confidence 32 222222 122223355555443 2466899999999855411 111111122334555555
Q ss_pred CCCCCEEEEEecCCeEEEEECCCCc-------EEEEee-CCCCCeEEEEEeC----------------------------
Q psy11350 289 HPSGRFLGTCCWDHSWRLWDLNQGQ-------EVLHQE-GHGKPVYCMSFQG---------------------------- 332 (471)
Q Consensus 289 ~~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~-~~~~~v~~~~~s~---------------------------- 332 (471)
......++..+..|.+..+....-. -+..+. .....|.++...+
T Consensus 158 ~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~ 237 (370)
T 3l6v_A 158 TDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAV 237 (370)
T ss_dssp ECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC--------------------------
T ss_pred eCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccc
Confidence 4555678888889988888754211 111111 1234555555444
Q ss_pred -------CCCEEEEEeCCCeEEEEeCCCC-------eeEE--EecccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11350 333 -------DGSVVATGGLDAFGRVWDLRTG-------RCIM--FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 333 -------d~~~l~t~~~dg~i~iwd~~~~-------~~~~--~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~ 394 (471)
++..+++.+..|..+...+..- +=+. .+....+.+..+.+..+...++..+..|.+.-..+.
T Consensus 238 ~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 238 IDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGS 315 (370)
T ss_dssp ---------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGG
T ss_pred cccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHh
Confidence 4457888899999888876432 1111 222223445554443444455555666665555543
No 373
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=55.17 E-value=1.2e+02 Score=27.31 Aligned_cols=224 Identities=10% Similarity=0.048 Sum_probs=120.6
Q ss_pred CEEEEEeCCCcEEEEeCCCCc-------eEE--EeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEE---EeCCC--
Q psy11350 165 QHVATASWSGLCKLWTVPECE-------LVQ--TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL---WSLDK-- 230 (471)
Q Consensus 165 ~~l~tg~~dg~i~iwd~~~~~-------~~~--~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~i---wd~~~-- 230 (471)
..+++.+.+|.|+--.+.+.+ -+. .++. ...+..+....... .|+.-+..|.+.- |++..
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke-~D~~~~~~~~~t~d-----~ll~fT~~Gr~y~~~~~~lp~~~ 77 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQ-DDIVAHFFVCSTHD-----LILFFTTQGRVYRAKAYDLPEAS 77 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCG-GGCEEEEEEEETTS-----EEEEEETTSEEEEEEGGGSCBCC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCC-CCEEEEEEEeCCCC-----EEEEEeCCCeEEEEEHHHCcCCC
Confidence 467777888888866543211 111 1111 23344444443333 4565666676554 44432
Q ss_pred ----Ccceee-ecCCCCcceEEEE-ECC--CCCEEEEEeCCCeEEeccc----------cccccCCCCcceEEEEECCCC
Q psy11350 231 ----DTPLAN-LEGHEPFRVSRIK-FHP--SGRFLGTCCWDHSWRLDTP----------LANLEGHEPFRVSRIKFHPSG 292 (471)
Q Consensus 231 ----~~~~~~-~~~~~~~~v~~~~-~s~--~~~~i~~~~~d~~~~~~~~----------~~~~~~~~~~~v~~l~~~~~~ 292 (471)
|.++.. +....+..|..+. +.+ +..++++.+..|.+..... ...+.......+..+......
T Consensus 78 r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~ 157 (327)
T 3uc1_A 78 RTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAG 157 (327)
T ss_dssp SSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTT
T ss_pred ccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCC
Confidence 222222 2222233555554 432 5789999999998654211 111112223345555555556
Q ss_pred CEEEEEecCCeEEEEECC--CCc---------EEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCC-------
Q psy11350 293 RFLGTCCWDHSWRLWDLN--QGQ---------EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG------- 354 (471)
Q Consensus 293 ~~l~~~~~dg~i~iwd~~--~~~---------~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~------- 354 (471)
..|+..+..|.+..+... .-. ....+. ....|.++...+++..|+..+..|.++.-.+..-
T Consensus 158 d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~ 236 (327)
T 3uc1_A 158 DDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGG 236 (327)
T ss_dssp CEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred CEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCC
Confidence 788889999998888776 211 111122 3456777766666678889999999988775421
Q ss_pred eeEEEec--ccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 355 RCIMFLE--GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 355 ~~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
+-+..+. .-.+.+..+....+...++..+.+|.+.-++...
T Consensus 237 ~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 237 KGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred CcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 1122222 2123455544444445666667777777776643
No 374
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=53.73 E-value=1.4e+02 Score=27.52 Aligned_cols=180 Identities=14% Similarity=0.053 Sum_probs=101.2
Q ss_pred EEEEEeCCCcEEEEeCCC-------CcceeeecCCCCcceEEEEECCCCCEEEEEeCCCe-EEe--cc-----------c
Q psy11350 213 SLASCAQDGSVKLWSLDK-------DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-WRL--DT-----------P 271 (471)
Q Consensus 213 ~l~s~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~-~~~--~~-----------~ 271 (471)
++++.+.+|.|+--.+.. +.-+..+....+..+..+........++..+..|. +.+ +. +
T Consensus 9 ~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~ 88 (370)
T 3l6v_A 9 VVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRP 88 (370)
T ss_dssp EEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred EEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcC
Confidence 688999999999764421 12222232223335666666666677777777776 333 11 0
Q ss_pred ccc-ccCCCCcceEEEEE-C--CCCCEEEEEecCCeEEEEECCCCc-------EEEEeeCCCCCeEEEEEeCCCCEEEEE
Q psy11350 272 LAN-LEGHEPFRVSRIKF-H--PSGRFLGTCCWDHSWRLWDLNQGQ-------EVLHQEGHGKPVYCMSFQGDGSVVATG 340 (471)
Q Consensus 272 ~~~-~~~~~~~~v~~l~~-~--~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~s~d~~~l~t~ 340 (471)
... +.......|.++.. . .++.+|+.++..|.++...+.... ....+.. ...+..+........|+..
T Consensus 89 i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~ 167 (370)
T 3l6v_A 89 IINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLF 167 (370)
T ss_dssp GGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEE
T ss_pred HhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEE
Confidence 011 11112234555443 2 245689999999999998864321 1122322 4455555555555677778
Q ss_pred eCCCeEEEEeCCC---------CeeEEEecccCcCEEEEEEcC-----------------------------------CC
Q psy11350 341 GLDAFGRVWDLRT---------GRCIMFLEGHLKSVFSVDFSP-----------------------------------DG 376 (471)
Q Consensus 341 ~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~~~~sp-----------------------------------~~ 376 (471)
+..|.+..++... |-....+. ....|.++...+ ++
T Consensus 168 T~~G~~irf~~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~ 246 (370)
T 3l6v_A 168 ASNGKTVRFGESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDV 246 (370)
T ss_dssp ETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC-----------------------------------
T ss_pred eCCCeEEEEEccccCccCCCCCCeeeEEeC-CCCEEEEEEEeccccccccccccccccccccccccccccccccccccCC
Confidence 8888887776532 21222222 224455554444 44
Q ss_pred CEEEEEeCCCcEEEEECC
Q psy11350 377 YHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 377 ~~l~s~s~dg~i~iwd~~ 394 (471)
..+++.+..|..+...+.
T Consensus 247 ~~il~vTe~G~gKrt~~~ 264 (370)
T 3l6v_A 247 AYILTATENGYGKRTPLA 264 (370)
T ss_dssp CEEEEEETTSEEEEEEGG
T ss_pred ceEEEeeCCCCEEEEEHH
Confidence 678888999998888764
No 375
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=49.92 E-value=50 Score=32.66 Aligned_cols=59 Identities=14% Similarity=0.043 Sum_probs=34.3
Q ss_pred EEEEEEeeCCCCCCccEEEEEeCC------------CcEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEE
Q psy11350 197 VGAIEFHPLPSEGAVCSLASCAQD------------GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTC 260 (471)
Q Consensus 197 v~~l~~~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~ 260 (471)
.-.|+|+|.+. +++.-..+ ..+.+.+..+++....+..+....++.++|+||++.+++.
T Consensus 478 PDNL~fd~~G~-----LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGR-----LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCC-----EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCC-----EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 46788998886 33332221 1244455556665555555555566667777766665543
No 376
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=49.38 E-value=77 Score=31.15 Aligned_cols=12 Identities=8% Similarity=0.155 Sum_probs=8.2
Q ss_pred CEEEEEEeeCCC
Q psy11350 196 NVGAIEFHPLPS 207 (471)
Q Consensus 196 ~v~~l~~~~~~~ 207 (471)
....|.|.+++.
T Consensus 477 sPDnL~fd~~G~ 488 (592)
T 4a9v_A 477 SPDGLGFDKAGR 488 (592)
T ss_dssp CEEEEEECTTCC
T ss_pred CCCceEECCCCC
Confidence 355677877775
No 377
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.86 E-value=28 Score=35.21 Aligned_cols=37 Identities=19% Similarity=0.294 Sum_probs=30.1
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeec
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRG 192 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~ 192 (471)
.|.++.+ +..+|++-+.|.++|+|++.+++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4665544 578999999999999999999998877654
No 378
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.33 E-value=30 Score=35.06 Aligned_cols=36 Identities=17% Similarity=0.271 Sum_probs=29.1
Q ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEec
Q psy11350 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361 (471)
Q Consensus 324 ~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~ 361 (471)
.|.++.+ +..++++-+.|.++|+|++.+++++.+..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3554444 57799999999999999999999887764
No 379
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=47.01 E-value=1.5e+02 Score=25.92 Aligned_cols=196 Identities=13% Similarity=0.004 Sum_probs=90.0
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEeCCCCcc
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP 233 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 233 (471)
.|..++...+. .++. . ||.|+.|-....-.+..-..-...|..|+.-... .+.-. ||.|..|=......
T Consensus 64 ~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~h-------s~al~-~G~v~~wG~n~~gq 132 (282)
T 3qhy_B 64 GVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWA-------SYALK-DGKVIAWGDDSDGQ 132 (282)
T ss_dssp CCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTE-------EEEEE-TTEEEEEECCTTST
T ss_pred CEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCE-------EEEEe-CCeEEEecCCCCCc
Confidence 34455444322 2333 4 8888888754321111000112467777765543 23334 89999997543222
Q ss_pred eeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEecccc----ccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEEC
Q psy11350 234 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPL----ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDL 309 (471)
Q Consensus 234 ~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~----~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~ 309 (471)
+.. +......|..++.......+ -. ++.+..+-.. ..........|..++.-.... ++. .||.|+.|=.
T Consensus 133 lg~-~~~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~ 205 (282)
T 3qhy_B 133 TTV-PAEAQSGVTALDGGVYTALA--VK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGD 205 (282)
T ss_dssp TSC-CGGGGSSEEEEEECSSEEEE--EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEEC
T ss_pred CCC-CccCCCCeEEEEcccCEEEE--EE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEEC
Confidence 211 11111134444433322222 12 3443321110 001111123577777654332 333 5999999976
Q ss_pred CCCcEEEEeeCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcC
Q psy11350 310 NQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374 (471)
Q Consensus 310 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp 374 (471)
.....+-.-......|..++......++++ ||.|+.|-.....++.. ...|..|+-..
T Consensus 206 n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g~v~~wG~n~~gq~~v----~~~v~~iaaG~ 263 (282)
T 3qhy_B 206 NRYKQTTVPTEALSGVSAIASGEWYSLALK---NGKVIAWGSSRTAPSSV----QSGVSSIEAGP 263 (282)
T ss_dssp CTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TTEEEEESTTCCCCGGG----SSCEEEEEECS
T ss_pred CCCCCCCCCcccCCCceEEEcCCCEEEEEE---CCEEEEecCCCCccccC----CCCcEEEEECc
Confidence 543211111111235667766544333333 99999997655433211 23566665544
No 380
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=46.16 E-value=1.5e+02 Score=25.83 Aligned_cols=191 Identities=8% Similarity=-0.034 Sum_probs=105.9
Q ss_pred CCEEEEEEeeCCCCCCccEEEEEeCCCcEEEE---eCCCCcceeeecCCCCcceEEEEECC-CCCEEEEEeCCCeEEecc
Q psy11350 195 CNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW---SLDKDTPLANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLDT 270 (471)
Q Consensus 195 ~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iw---d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~i~~~~~d~~~~~~~ 270 (471)
..+..+.-..... .|+.-+..|.++-- ++....... + ...+..|..+.... +..+++..+..|.+....
T Consensus 24 D~~~~~~~~~t~~-----~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~ 96 (276)
T 3no0_A 24 APVVNILRVPFTE-----GLFLVSNRGRVYWIAGSQALQGSKVS-L-KSREEKIVGAFIREKFGNRLLLATKKGYVKKIP 96 (276)
T ss_dssp CCEEEEEEEETTS-----CEEEEETTSEEEEECSHHHHTSEECC-C-SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEE
T ss_pred CeEEEEEEECCCC-----EEEEEcCCCeEEEEEhhhCccCcccc-c-CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEE
Confidence 3444444444433 35566667766543 332221111 2 22333566664421 567899999999865422
Q ss_pred c---------cccccCCCCcceEEEEECCCCCEEEEEecCCeEEEEECCC---------CcEEEEeeCCCCCeEEEEEeC
Q psy11350 271 P---------LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ---------GQEVLHQEGHGKPVYCMSFQG 332 (471)
Q Consensus 271 ~---------~~~~~~~~~~~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~v~~~~~s~ 332 (471)
. ...+.-.....+..+........++..+..|.+..+.... |.....+. ....|.++...+
T Consensus 97 l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~ 175 (276)
T 3no0_A 97 LAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWN 175 (276)
T ss_dssp GGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEES
T ss_pred HHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeC
Confidence 1 1111122234566666666667888999999988887532 11212222 235666666666
Q ss_pred CCCEEEEEeCCCeEEEEeCCC-------CeeEEEecccCcCEEEEEEcCCCCEEEEEeCCCcEEE--EECC
Q psy11350 333 DGSVVATGGLDAFGRVWDLRT-------GRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKI--WDLR 394 (471)
Q Consensus 333 d~~~l~t~~~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~i~i--wd~~ 394 (471)
++..++..+..|.++...+.. ++-+..+ ...+.+..+....+...++..+.+|.+.. ++..
T Consensus 176 ~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 176 GEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred CCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 677888889999998887642 2223333 23344555444334456666777887776 7654
No 381
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=40.74 E-value=2.7e+02 Score=27.26 Aligned_cols=43 Identities=21% Similarity=0.315 Sum_probs=31.0
Q ss_pred ccCcCEEEEEEcCC--CCEEEEEeCCC----cEEEEECCCccchheecc
Q psy11350 362 GHLKSVFSVDFSPD--GYHLATGSEDN----AVKIWDLRKRRLLKWCTQ 404 (471)
Q Consensus 362 ~h~~~v~~~~~sp~--~~~l~s~s~dg----~i~iwd~~~~~~~~~~~~ 404 (471)
+|...+....|.|+ |..++.+..++ -..+.|..+++.+.....
T Consensus 361 gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~ 409 (591)
T 2zux_A 361 GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYA 409 (591)
T ss_dssp CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECC
T ss_pred CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCC
Confidence 78888888888887 45667766542 355689999998876653
No 382
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=39.39 E-value=2.3e+02 Score=25.97 Aligned_cols=205 Identities=14% Similarity=0.119 Sum_probs=104.3
Q ss_pred CeEEEEEecCCCEEEEEeCCCcEEEEeCCCC-----------ceEEEeec-CCCCEEEEEEeeCCCCCCccEEEEEeCCC
Q psy11350 154 PISYCSFSPDSQHVATASWSGLCKLWTVPEC-----------ELVQTFRG-HDCNVGAIEFHPLPSEGAVCSLASCAQDG 221 (471)
Q Consensus 154 ~V~~~~~s~~~~~l~tg~~dg~i~iwd~~~~-----------~~~~~~~~-h~~~v~~l~~~~~~~~~~~~~l~s~~~dg 221 (471)
.+..++++.-..+.+.-..+|.|+.|-.... .....+.. ....|..|+.-.. ..+....+|
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~-------hs~alt~~G 178 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA-------HSACVTAAG 178 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSS-------EEEEEETTS
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcC-------eEEEEeCCC
Confidence 3445566666666666777999999964321 11111111 1225666655332 345556789
Q ss_pred cEEEEeCCCCcceeeecCCCCcceEEEEECCCCCEEEEEeCCCeEEeccccccccCCCCcceEEEEECCCCCEEEEEecC
Q psy11350 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301 (471)
Q Consensus 222 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~i~~~~~d~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~~~~~d 301 (471)
.|..|=......+..-.. . ... ....+..+. ...|..++......+.++-..+
T Consensus 179 ~v~~wG~n~~GqLG~~~~--~-~~~---------------------~p~~v~~~~---~~~v~~ia~G~g~~~t~~l~~~ 231 (389)
T 3kci_A 179 DLYTWGKGRYGRLGHSDS--E-DQL---------------------KPKLVEALQ---GHRVVDIACGSGDAQTLCLTDD 231 (389)
T ss_dssp CEEEEECCGGGTTCSSSC--C-CEE---------------------EEEECGGGT---TSCEEEEEECCSSCEEEEEETT
T ss_pred eEEEeCCCCCCCcCCCCC--c-ccc---------------------cceEecccC---CCeEEEEEEcCCCcEEEEEccC
Confidence 999996533211110000 0 000 001111111 2246677765444566677788
Q ss_pred CeEEEEECCCC-c----------EEEEeeC-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEeCCCC-----------eeEE
Q psy11350 302 HSWRLWDLNQG-Q----------EVLHQEG-HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG-----------RCIM 358 (471)
Q Consensus 302 g~i~iwd~~~~-~----------~~~~~~~-~~~~v~~~~~s~d~~~l~t~~~dg~i~iwd~~~~-----------~~~~ 358 (471)
|.|+.|-.... + ....+.. ....|..++.... ..++-..+|.|+.|-.... ....
T Consensus 232 G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~--hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~ 309 (389)
T 3kci_A 232 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ--FSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 309 (389)
T ss_dssp TEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT--EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEE
T ss_pred CEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC--EEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCe
Confidence 99999964321 0 1111111 2234666665433 3444467899999965321 0111
Q ss_pred Eecc-cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCCc
Q psy11350 359 FLEG-HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396 (471)
Q Consensus 359 ~~~~-h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~~ 396 (471)
.+.. ....|..|+.. ..+.+....||.|..|-....
T Consensus 310 ~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 310 QVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDNDE 346 (389)
T ss_dssp ECGGGTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTT
T ss_pred EeccCCCCCEEEEEec--cCeEEEECCCCCEEEeeCCCC
Confidence 1221 12356666654 345556678999999987643
No 383
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=39.25 E-value=2.9e+02 Score=27.10 Aligned_cols=56 Identities=20% Similarity=0.183 Sum_probs=36.8
Q ss_pred CCCCCeEEEEEeCC--CCEEEEEeCCC----eEEEEeCCCCeeEEEecc--cCcCEEEEEEcCC
Q psy11350 320 GHGKPVYCMSFQGD--GSVVATGGLDA----FGRVWDLRTGRCIMFLEG--HLKSVFSVDFSPD 375 (471)
Q Consensus 320 ~~~~~v~~~~~s~d--~~~l~t~~~dg----~i~iwd~~~~~~~~~~~~--h~~~v~~~~~sp~ 375 (471)
+|...+....|.|+ |..++.+..++ -..+.|..+|+.+..... +.+.-....|.|+
T Consensus 361 gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~ 424 (591)
T 2zux_A 361 GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDPR 424 (591)
T ss_dssp CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCTT
T ss_pred CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCCC
Confidence 78888888888886 44666665541 345688889988877653 2345555556665
No 384
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=31.02 E-value=1.5e+02 Score=21.52 Aligned_cols=26 Identities=19% Similarity=0.125 Sum_probs=15.9
Q ss_pred EEEEEeCCCCEEEEEeCCCeEEEEeCCC
Q psy11350 326 YCMSFQGDGSVVATGGLDAFGRVWDLRT 353 (471)
Q Consensus 326 ~~~~~s~d~~~l~t~~~dg~i~iwd~~~ 353 (471)
..+.+..+|++++... ++.+ +|...+
T Consensus 59 ~~l~l~~dGNLVl~d~-~~~~-iW~S~t 84 (113)
T 3mez_B 59 CFMRLGHSGELDITDD-RLNT-VFVSNT 84 (113)
T ss_dssp CEEEECTTSCEEEECT-TSCE-EEECSC
T ss_pred EEEEEeCCCcEEEECC-CCCE-EEECCC
Confidence 3567777888777643 3443 676543
No 385
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=27.12 E-value=3.7e+02 Score=24.70 Aligned_cols=159 Identities=8% Similarity=0.003 Sum_probs=85.8
Q ss_pred CcCeEEEEEe---cC----CCEEEEEe-CCCcEEEEeCCCCceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcE
Q psy11350 152 TRPISYCSFS---PD----SQHVATAS-WSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223 (471)
Q Consensus 152 ~~~V~~~~~s---~~----~~~l~tg~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i 223 (471)
...+..+++. |+ +.+++.+. ..+.|.|+|+.+++.-+.+.. . |.|+ .. ..+ .-+|.-
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~--~------~~pd-~~----~~~--~i~G~~ 215 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHP--T------FKAE-RP----TKF--DYGGKE 215 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECG--G------GSCC-SC----EEE--EETTEE
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccC--C------Cccc-cC----cce--EECCEE
Confidence 3567777777 22 34444444 467899999999887776532 1 3443 10 111 112332
Q ss_pred EEEeCCCCcceeeecCCCCcceEEEEECCC----CCEEEEEeCCCe--EEeccc-------cc--cccCCCC--cceEEE
Q psy11350 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPS----GRFLGTCCWDHS--WRLDTP-------LA--NLEGHEP--FRVSRI 286 (471)
Q Consensus 224 ~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~i~~~~~d~~--~~~~~~-------~~--~~~~~~~--~~v~~l 286 (471)
.-|. ..+..++++|+ ++.+......+. +.+.+. .. ...+... ..-..+
T Consensus 216 ~~~~---------------~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~ 280 (381)
T 3q6k_A 216 YEFK---------------AGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIAL 280 (381)
T ss_dssp EEEC---------------CCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEE
T ss_pred eEec---------------cCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceE
Confidence 2232 16888999998 777777766553 333211 00 1111111 233456
Q ss_pred EEC-CCCCEEEEEecCCeEEEEECCC-C---cEEEEe--eCCCCCeEEEEEeCCCCEEEEE
Q psy11350 287 KFH-PSGRFLGTCCWDHSWRLWDLNQ-G---QEVLHQ--EGHGKPVYCMSFQGDGSVVATG 340 (471)
Q Consensus 287 ~~~-~~~~~l~~~~~dg~i~iwd~~~-~---~~~~~~--~~~~~~v~~~~~s~d~~~l~t~ 340 (471)
++. .+|..+++--..+.|..|+..+ . .....+ ...-.....+.+.++|.+.+..
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 675 5677777777788899999875 1 111222 1122345666666666544444
No 386
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=26.28 E-value=3.7e+02 Score=24.45 Aligned_cols=110 Identities=13% Similarity=0.066 Sum_probs=60.4
Q ss_pred ceEEEEECCCCCEEEEEecCCeEEEEECCCC-c----------EEEEee-CCCCCeEEEEEeCCCCEEEEEeCCCeEEEE
Q psy11350 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG-Q----------EVLHQE-GHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349 (471)
Q Consensus 282 ~v~~l~~~~~~~~l~~~~~dg~i~iwd~~~~-~----------~~~~~~-~~~~~v~~~~~s~d~~~l~t~~~dg~i~iw 349 (471)
.|..|+.. ..+.++...+|.|+.|=.... + ....+. .....|..++........++-..+|.|+.|
T Consensus 160 ~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~w 237 (389)
T 3kci_A 160 EVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSW 237 (389)
T ss_dssp CEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEE
T ss_pred eEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEE
Confidence 45556554 345556667888888864321 0 111111 123456677665433566666789999999
Q ss_pred eCCCC-----------eeEEEecc-cCcCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11350 350 DLRTG-----------RCIMFLEG-HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395 (471)
Q Consensus 350 d~~~~-----------~~~~~~~~-h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~~ 395 (471)
-.... .....+.. ....|..++.. ..+.+.-..||.|..|-...
T Consensus 238 G~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 238 GDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp ECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCG
T ss_pred eCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCC
Confidence 64321 11112221 12246666654 34455557899999997643
No 387
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=25.84 E-value=1.8e+02 Score=20.76 Aligned_cols=46 Identities=20% Similarity=0.336 Sum_probs=25.2
Q ss_pred EEEEeCCCCEEEEEeCCCeEEEEeCCCCeeEEEecccCcCEEEEEEcCCCCEEEEE
Q psy11350 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382 (471)
Q Consensus 327 ~~~~s~d~~~l~t~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~ 382 (471)
.+.+..||.+++... ++. .||...+.. ......+.+.++|.+++-+
T Consensus 54 ~L~l~~dGnLvL~d~-~~~-~vWss~t~~--------~~~~~~l~L~ddGNlVly~ 99 (105)
T 4h3o_A 54 SAVLQSDGNFVVYDS-SGR-SLWASHSTR--------GSGNYILILQDDGNVIIYG 99 (105)
T ss_dssp EEEECTTSCEEEECT-TCC-EEEECCCCC--------CSSCEEEEECTTSCEEEEE
T ss_pred EEEEeCCccEEEECC-CcE-EEEEecCCC--------CCCCEEEEEeCCCeEEEEC
Confidence 477788888776643 333 367644321 1122345566677766653
No 388
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=25.57 E-value=3.6e+02 Score=24.02 Aligned_cols=227 Identities=9% Similarity=0.023 Sum_probs=119.3
Q ss_pred cCCCEEEEEeCCCcEEEEeCCCC----ceEEEeecCCCCEEEEEEeeCCCCCCccEEEEEeCCCcEEEEe---CCC----
Q psy11350 162 PDSQHVATASWSGLCKLWTVPEC----ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS---LDK---- 230 (471)
Q Consensus 162 ~~~~~l~tg~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~~~~~l~s~~~dg~i~iwd---~~~---- 230 (471)
|+..++++.+.+|.|+--.+.+. .....++.. ..+..+....... .|+..+..|.+.-.. +..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d-----~ll~fT~~Gr~~~~~~~elp~~~r~ 76 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKD-----VLLLFTNKGNYLYCPVHELPDIRWK 76 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTS-----EEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCC-----EEEEEECCCEEEEEEHHHCcCCCCC
Confidence 56678889999999987765321 111123332 3344444444333 467777778765544 322
Q ss_pred --Ccceee-ecCCCCcceEEE-EECC--CCCEEEEEeCCCeEEeccc-----------cccccCCCCcceEEEEECCCCC
Q psy11350 231 --DTPLAN-LEGHEPFRVSRI-KFHP--SGRFLGTCCWDHSWRLDTP-----------LANLEGHEPFRVSRIKFHPSGR 293 (471)
Q Consensus 231 --~~~~~~-~~~~~~~~v~~~-~~s~--~~~~i~~~~~d~~~~~~~~-----------~~~~~~~~~~~v~~l~~~~~~~ 293 (471)
|.++.. +....+..|..+ ...+ ++.+++..+..|.+..... ...+.-.....+..+.......
T Consensus 77 a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~ 156 (323)
T 1wp5_A 77 DLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMN 156 (323)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCS
T ss_pred CCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCC
Confidence 222222 222223345554 3433 3668899999998554211 1111112223455555555566
Q ss_pred EEEEEecCCeEEEEECCCC-------cEEEEee-CCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEeCCC-------CeeE
Q psy11350 294 FLGTCCWDHSWRLWDLNQG-------QEVLHQE-GHGKPVYCMSFQGDGS-VVATGGLDAFGRVWDLRT-------GRCI 357 (471)
Q Consensus 294 ~l~~~~~dg~i~iwd~~~~-------~~~~~~~-~~~~~v~~~~~s~d~~-~l~t~~~dg~i~iwd~~~-------~~~~ 357 (471)
.++..+.+|.+..+....- +-+..+. .....|.++...+++. .|++.+..|..+..++.. ++-+
T Consensus 157 ~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv 236 (323)
T 1wp5_A 157 ELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGV 236 (323)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCE
T ss_pred EEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCE
Confidence 7888888999888876431 1122121 1234566665544445 788888888888777643 1212
Q ss_pred EEec---ccCcCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11350 358 MFLE---GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394 (471)
Q Consensus 358 ~~~~---~h~~~v~~~~~sp~~~~l~s~s~dg~i~iwd~~ 394 (471)
..+. .....+..+....++..++..+..|.+.-..+.
T Consensus 237 ~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 237 VILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp ECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred ECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence 2221 222245433333334556666677776655554
No 389
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=24.70 E-value=5.5e+02 Score=25.90 Aligned_cols=53 Identities=17% Similarity=0.203 Sum_probs=34.6
Q ss_pred CeEEEEEecCC-CEEEEEeCCCcEEEEeCCCCceEEEeecC-------CCCEEEEEEeeCCC
Q psy11350 154 PISYCSFSPDS-QHVATASWSGLCKLWTVPECELVQTFRGH-------DCNVGAIEFHPLPS 207 (471)
Q Consensus 154 ~V~~~~~s~~~-~~l~tg~~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~l~~~~~~~ 207 (471)
.|.+++++|.. ..|+++...|.|..++ ..++.-..+..+ ...|.+|++.|...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~ 84 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDP 84 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSST
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCC
Confidence 89999999974 4566677667776665 334433333322 24589999998654
No 390
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=23.66 E-value=2.8e+02 Score=26.66 Aligned_cols=67 Identities=12% Similarity=0.034 Sum_probs=43.4
Q ss_pred CeEEEEEeC----CC--CEEEEEeCCCeEEEEeCC-CC-------eeEEEecc--cCcCEEEEEEcCCCCEEEEEeCCCc
Q psy11350 324 PVYCMSFQG----DG--SVVATGGLDAFGRVWDLR-TG-------RCIMFLEG--HLKSVFSVDFSPDGYHLATGSEDNA 387 (471)
Q Consensus 324 ~v~~~~~s~----d~--~~l~t~~~dg~i~iwd~~-~~-------~~~~~~~~--h~~~v~~~~~sp~~~~l~s~s~dg~ 387 (471)
..++|+... ++ ..+..|+.+|.|.-.-+. .+ ..+..+.. ...+|..|.+++++.+|+.++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 457776643 23 357788899987443322 21 12223332 3578999999999999999998887
Q ss_pred EEE
Q psy11350 388 VKI 390 (471)
Q Consensus 388 i~i 390 (471)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 391
>3ukx_C Bimax2 peptide; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding, protein transport-IN complex; 2.20A {Mus musculus}
Probab=22.81 E-value=19 Score=17.95 Aligned_cols=10 Identities=20% Similarity=-0.057 Sum_probs=5.7
Q ss_pred cccccccceE
Q psy11350 7 VIYVKKQNTV 16 (471)
Q Consensus 7 ~~~~~~~~~~ 16 (471)
++|++|..++
T Consensus 18 ddppkkrrrl 27 (28)
T 3ukx_C 18 DDPPKKRRRL 27 (28)
T ss_dssp SSCCSCCCCC
T ss_pred CCchhhhhcc
Confidence 3566766543
No 392
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=20.26 E-value=2.5e+02 Score=20.26 Aligned_cols=23 Identities=13% Similarity=0.354 Sum_probs=13.1
Q ss_pred EEEEeCCCCEEEEEeCCCeEEEEe
Q psy11350 327 CMSFQGDGSVVATGGLDAFGRVWD 350 (471)
Q Consensus 327 ~~~~s~d~~~l~t~~~dg~i~iwd 350 (471)
.+.+..+|++++... ++.+.+|.
T Consensus 53 ~l~l~~dGNLVl~~~-~~~~~vW~ 75 (111)
T 3mez_A 53 TLRLNNRGQLEIHSA-NSNTPVWV 75 (111)
T ss_dssp EEEECTTSCEEEECS-SCSSCSEE
T ss_pred EEEEcCCCcEEEEeC-CCCEEEEE
Confidence 456777777766543 33334664
Done!