Your job contains 1 sequence.
>psy11350
MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAK
DKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEEYSLAKAKERLAKAKEH
LHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWT
VPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH
EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW
DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL
EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLY
IDVLESLNPGIGNIISSALKEQVEPIPLLLDIQKLTFKFDSDLHAMVLNQK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11350
(471 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 748 1.3e-92 2
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 709 1.5e-89 2
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 707 1.5e-89 2
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 713 1.9e-89 2
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 707 2.4e-89 2
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 707 2.4e-89 2
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 707 3.0e-89 2
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 706 3.0e-89 2
FB|FBgn0036733 - symbol:U4-U6-60K "U4-U6 small nuclear ri... 579 1.4e-66 2
WB|WBGene00007972 - symbol:prp-4 species:6239 "Caenorhabd... 465 3.8e-56 2
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 479 1.3e-53 2
UNIPROTKB|G4MXN3 - symbol:MGG_01259 "Pre-mRNA splicing fa... 372 1.1e-49 3
DICTYBASE|DDB_G0287635 - symbol:prpf4 "pre-mRNA processin... 494 2.0e-49 2
ASPGD|ASPL0000042645 - symbol:AN1468 species:162425 "Emer... 397 1.2e-47 2
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 393 1.8e-42 2
SGD|S000006382 - symbol:PRP4 "Splicing factor" species:49... 361 4.1e-33 1
TAIR|locus:2063349 - symbol:AT2G05720 "AT2G05720" species... 222 1.2e-30 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 339 1.3e-30 2
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 333 2.8e-29 2
CGD|CAL0004633 - symbol:orf19.7343 species:5476 "Candida ... 291 1.0e-28 2
UNIPROTKB|Q5A3W6 - symbol:PRP4 "Potential spliceosomal U4... 291 1.0e-28 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 313 5.0e-28 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 316 7.6e-27 3
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 291 3.8e-25 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 294 1.5e-24 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 295 2.4e-24 1
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 300 4.3e-24 1
UNIPROTKB|E1BHK9 - symbol:E1BHK9 "Uncharacterized protein... 296 4.9e-24 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 286 2.1e-23 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 284 1.2e-22 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 279 4.6e-22 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 260 6.5e-22 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 283 6.7e-22 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 277 8.2e-22 1
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 277 1.5e-21 1
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 276 2.2e-21 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 255 2.4e-21 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 255 2.4e-21 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 255 2.4e-21 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 255 2.4e-21 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 255 2.4e-21 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 255 2.4e-21 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 255 2.4e-21 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 273 2.4e-21 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 273 2.7e-21 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 269 3.2e-21 1
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 274 3.7e-21 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 273 4.9e-21 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 270 5.6e-21 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 268 6.0e-21 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 271 6.6e-21 1
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 270 1.2e-20 1
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 269 1.4e-20 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 274 1.5e-20 2
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 271 1.6e-20 1
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 271 1.6e-20 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 271 1.6e-20 1
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 271 1.7e-20 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 257 1.7e-20 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 270 1.9e-20 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 264 2.2e-20 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 245 3.0e-20 1
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 268 3.6e-20 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 256 3.6e-20 1
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 265 4.3e-20 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 243 5.0e-20 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 265 5.2e-20 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 241 8.4e-20 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 263 1.0e-19 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 240 1.1e-19 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 262 5.9e-19 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 233 6.4e-19 1
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 255 6.9e-19 1
POMBASE|SPBC15D4.14 - symbol:taf73 "transcription factor ... 254 9.0e-19 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 175 1.0e-18 2
FB|FBgn0010356 - symbol:Taf5 "TBP-associated factor 5" sp... 254 1.1e-18 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 252 1.2e-18 1
UNIPROTKB|Q08E38 - symbol:PRPF19 "Pre-mRNA-processing fac... 250 1.4e-18 1
UNIPROTKB|B2CCY7 - symbol:PRPF19 "Nuclear matrix protein ... 250 1.4e-18 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 244 1.8e-18 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 244 1.8e-18 1
UNIPROTKB|Q5ZMA2 - symbol:PRPF19 "Pre-mRNA-processing fac... 249 1.8e-18 1
UNIPROTKB|E2R8L3 - symbol:PRPF19 "Uncharacterized protein... 249 1.9e-18 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 250 2.1e-18 1
UNIPROTKB|Q9UMS4 - symbol:PRPF19 "Pre-mRNA-processing fac... 248 2.3e-18 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 241 2.5e-18 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 241 2.6e-18 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 241 2.6e-18 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 241 2.6e-18 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 250 2.7e-18 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 250 2.7e-18 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 250 2.7e-18 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 250 2.7e-18 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 250 2.7e-18 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 244 2.9e-18 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 244 2.9e-18 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 241 3.4e-18 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 240 3.5e-18 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 243 3.9e-18 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 238 4.3e-18 1
WARNING: Descriptions of 1227 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 748 (268.4 bits), Expect = 1.3e-92, Sum P(2) = 1.3e-92
Identities = 147/278 (52%), Positives = 187/278 (67%)
Query: 123 IPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVP 182
IPE+TRT + QEL K+L +++ +CSQ+GD RPISYC FSP+S+ + TASWSGLCKLW VP
Sbjct: 187 IPESTRTIKQQELHKNLRNVNNFCSQIGDDRPISYCQFSPNSKLLVTASWSGLCKLWKVP 246
Query: 183 ECELVQTFRGHDCNVGAIEFHP---LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEG 239
+C L++T RGH+ NVGAI FHP L E + ++ASCA DGSVKLWSLD D P+A++EG
Sbjct: 247 DCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEG 306
Query: 240 HEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRF 294
H RV+R+ +HPSGRFLGT C+DHSWRL + + EGH V + FHP G
Sbjct: 307 HS-MRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSK-GVHDLHFHPDGSL 364
Query: 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
GT D R+WDL G+ V+ EGH K +Y ++F +G VATG D +VWDLR
Sbjct: 365 AGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQR 424
Query: 355 RCIMFLEGHLKSVFSVDFSP-DGYHLATGSEDNAVKIW 391
RCI + H V SV F P DG++L TG+ DN KIW
Sbjct: 425 RCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIW 462
Score = 552 (199.4 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 103/199 (51%), Positives = 135/199 (67%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF--------LGTCCWDHS 265
L + + G KLW + T + L GH V I FHP + +C D S
Sbjct: 231 LVTASWSGLCKLWKVPDCTLIRTLRGHNT-NVGAISFHPQATLTLEESDVNMASCAADGS 289
Query: 266 ---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W LD+ P+A++EGH RV+R+ +HPSGRFLGT C+DHSWRLWDL +E+LHQEG
Sbjct: 290 VKLWSLDSDEPIADIEGHS-MRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEG 348
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H K V+ + F DGS+ TGGLD+F RVWDLRTGRC+MFLEGH+K ++S++FSP+G+H+A
Sbjct: 349 HSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVA 408
Query: 381 TGSEDNAVKIWDLRKRRLL 399
TGS DNA K+WDLR+RR +
Sbjct: 409 TGSGDNACKVWDLRQRRCI 427
Score = 261 (96.9 bits), Expect = 5.1e-36, Sum P(2) = 5.1e-36
Identities = 72/232 (31%), Positives = 104/232 (44%)
Query: 166 HVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL 225
++A+ + G KLW++ E + GH V + +HP G L + D S +L
Sbjct: 280 NMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHP---SGRF--LGTTCYDHSWRL 334
Query: 226 WSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTP--LANLEGHEP 280
W L+ + + EGH V + FHP G GT D W L T + LEGH
Sbjct: 335 WDLEVQEEILHQEGHSK-GVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIK 393
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ-GDGSVVAT 339
+ I F P+G + T D++ ++WDL Q + + H V + FQ DG + T
Sbjct: 394 -EIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLT 452
Query: 340 GGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
G D ++W + L GH V VD SPDG +AT S D K+W
Sbjct: 453 GAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 194 (73.4 bits), Expect = 1.3e-92, Sum P(2) = 1.3e-92
Identities = 49/108 (45%), Positives = 70/108 (64%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAAN------KD-VDDDQEK-YTNVHTSNVYMEID 55
DED V K++ + YGSLEE+E++RL+ KD V E + N+ +S ME++
Sbjct: 3 DEDEAPVVKRSRIFYGSLEEKEKERLSREGTSTTAKDAVKAGIEAGHINI-SSGESMEME 61
Query: 56 DEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
+ +++ + +L EFERRK+AR + VSTDD +VK LR LGEPI LFGE
Sbjct: 62 ERVSERQAEVLAEFERRKRARQITVSTDDVEVKACLRALGEPITLFGE 109
Score = 98 (39.6 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 155 ISYCSFSP-DSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
+S F P D ++ T ++ K+WT P ++T GH+ V ++ P +G +
Sbjct: 437 VSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSP---DGQL-- 491
Query: 214 LASCAQDGSVKLW 226
+A+C+ D + KLW
Sbjct: 492 IATCSYDRTFKLW 504
Score = 40 (19.1 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
FSP+ L T S K+W + L++
Sbjct: 224 FSPNSKLLVTASWSGLCKLWKVPDCTLIR 252
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 709 (254.6 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 144/281 (51%), Positives = 180/281 (64%)
Query: 120 HLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLW 179
H IPE TRT++ QEL K L SL+ +CSQ+GD RPISYC FSP+S+ +ATA WSGLCKLW
Sbjct: 198 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW 257
Query: 180 TVPECELVQTFRGHDCNVGAIEFHPLPS---EGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
+VP+C L+ T RGH+ NVGAI FHP + + +LASCA DGSVKLWSLD D P+A+
Sbjct: 258 SVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD 317
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPS 291
+EGH RV+R+ +HPSGRFLGT C+D SWRL + + EGH V I FH
Sbjct: 318 IEGHT-VRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQD 375
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G GT D R+WDL G+ ++ EGH K +Y +SF +G +ATG D +VWDL
Sbjct: 376 GSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDL 435
Query: 352 RTGRCIMFLEGHLKSVFSVDFSP-DGYHLATGSEDNAVKIW 391
R RC+ + H V V F P G L TG+ DN KIW
Sbjct: 436 RQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIW 476
Score = 553 (199.7 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 110/207 (53%), Positives = 135/207 (65%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF--------LGTCCWDHS 265
LA+ G KLWS+ + L L GH V I FHP L +C D S
Sbjct: 245 LATACWSGLCKLWSVPDCSLLHTLRGHNT-NVGAIVFHPKSTVSLDQKDVNLASCAADGS 303
Query: 266 ---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W LD+ P+A++EGH RV+R+ +HPSGRFLGT C+D SWRLWDL +E+LHQEG
Sbjct: 304 VKLWSLDSDEPVADIEGHT-VRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEG 362
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H VY ++F DGS+ TGGLDAFGRVWDLRTGRCIMFLEGHLK ++ + FSP+GYH+A
Sbjct: 363 HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIA 422
Query: 381 TGSEDNAVKIWDLRKRRLLKWCTQLLP 407
TGS DN K+WDLR+RR C +P
Sbjct: 423 TGSGDNTCKVWDLRQRR----CVYTIP 445
Score = 239 (89.2 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 73/244 (29%), Positives = 104/244 (42%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P S S ++A+ + G KLW++ E V GH V + +HP G
Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHP---SGRF-- 336
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDT 270
L + D S +LW L+ + + EGH V I FH G GT D W L T
Sbjct: 337 LGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT 395
Query: 271 P--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+ LEGH + I F P+G + T D++ ++WDL Q + V H V +
Sbjct: 396 GRCIMFLEGHLK-EIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGV 454
Query: 329 SFQG-DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
F+ G + TG D ++W + L GH V +D S DG +AT S D
Sbjct: 455 KFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRT 514
Query: 388 VKIW 391
K+W
Sbjct: 515 FKLW 518
Score = 204 (76.9 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 49/107 (45%), Positives = 71/107 (66%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGE
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGE 123
Score = 196 (74.1 bits), Expect = 2.2e-29, Sum P(2) = 2.2e-29
Identities = 55/182 (30%), Positives = 76/182 (41%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRF----- 294
+S F P+ + L T CW +L P L L GH V I FHP
Sbjct: 233 ISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNT-NVGAIVFHPKSTVSLDQK 291
Query: 295 ---LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
L +C D S +LW L+ + V EGH V + + G + T D R+WDL
Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDL 351
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
I+ EGH V+ + F DG TG D ++WDLR R + + L G
Sbjct: 352 EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 411
Query: 412 VT 413
++
Sbjct: 412 IS 413
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 707 (253.9 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 143/281 (50%), Positives = 180/281 (64%)
Query: 120 HLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLW 179
H IPE TRT++ QEL K L SL+ +CSQ+GD RPISYC FSP+S+ +ATA WSGLCKLW
Sbjct: 199 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW 258
Query: 180 TVPECELVQTFRGHDCNVGAIEFHPLPS---EGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
+VP+C L+ T RGH+ NVGAI FHP + + +LASCA DGSVKLWSLD D P+A+
Sbjct: 259 SVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVAD 318
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPS 291
+EGH RV+R+ +HPSGRFLGT C+D SWRL + + EGH V I FH
Sbjct: 319 IEGHT-VRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQD 376
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G GT D R+WDL G+ ++ EGH K +Y ++F +G +ATG D +VWDL
Sbjct: 377 GSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDL 436
Query: 352 RTGRCIMFLEGHLKSVFSVDFSP-DGYHLATGSEDNAVKIW 391
R RC+ + H V V F P G L TG+ DN KIW
Sbjct: 437 RQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 477
Score = 553 (199.7 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 110/207 (53%), Positives = 135/207 (65%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF--------LGTCCWDHS 265
LA+ G KLWS+ L L GH V I FHP L +C D S
Sbjct: 246 LATACWSGLCKLWSVPDCNLLHTLRGHNT-NVGAIVFHPKSTVSLDPKDVNLASCAADGS 304
Query: 266 ---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W LD+ P+A++EGH RV+R+ +HPSGRFLGT C+D SWRLWDL +E+LHQEG
Sbjct: 305 VKLWSLDSDEPVADIEGHT-VRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEG 363
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H VY ++F DGS+ TGGLDAFGRVWDLRTGRCIMFLEGHLK ++ ++FSP+GYH+A
Sbjct: 364 HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIA 423
Query: 381 TGSEDNAVKIWDLRKRRLLKWCTQLLP 407
TGS DN K+WDLR+RR C +P
Sbjct: 424 TGSGDNTCKVWDLRQRR----CVYTIP 446
Score = 248 (92.4 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 74/244 (30%), Positives = 106/244 (43%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P S S P ++A+ + G KLW++ E V GH V + +HP G
Sbjct: 283 PKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHP---SGRF-- 337
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDT 270
L + D S +LW L+ + + EGH V I FH G GT D W L T
Sbjct: 338 LGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT 396
Query: 271 P--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+ LEGH + I F P+G + T D++ ++WDL Q + V H V +
Sbjct: 397 GRCIMFLEGHLK-EIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGV 455
Query: 329 SFQG-DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
F+ G+ + TG D ++W + L GH V +D S DG +AT S D
Sbjct: 456 KFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRT 515
Query: 388 VKIW 391
K+W
Sbjct: 516 FKLW 519
Score = 206 (77.6 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 50/107 (46%), Positives = 71/107 (66%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKD--VDDDQEKYT----NVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + + D K N++ TS EI++
Sbjct: 18 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEE 77
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGE
Sbjct: 78 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGE 124
Score = 195 (73.7 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 55/181 (30%), Positives = 75/181 (41%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL----EGHEPFRVSRIKFHPSGRF----- 294
+S F P+ + L T CW +L P NL GH V I FHP
Sbjct: 234 ISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNT-NVGAIVFHPKSTVSLDPK 292
Query: 295 ---LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
L +C D S +LW L+ + V EGH V + + G + T D R+WDL
Sbjct: 293 DVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDL 352
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
I+ EGH V+ + F DG TG D ++WDLR R + + L G
Sbjct: 353 EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 412
Query: 412 V 412
+
Sbjct: 413 I 413
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 713 (256.0 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 144/278 (51%), Positives = 181/278 (65%)
Query: 123 IPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVP 182
IPEATRT++ QEL K L SL+ +CSQ+GD RP+SYC FSP+S+ +ATA WSGLCKLW+VP
Sbjct: 201 IPEATRTSQRQELHKSLRSLNNFCSQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVP 260
Query: 183 ECELVQTFRGHDCNVGAIEFHPLPS---EGAVCSLASCAQDGSVKLWSLDKDTPLANLEG 239
+C LV T RGH NVGAI FHP + + +LASCA DGSVKLWSL+ D P+A++EG
Sbjct: 261 DCNLVHTLRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEG 320
Query: 240 HEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRF 294
H RV+R+ +HPSGRFLGT C+DHSWRL + + EGH V I FH G
Sbjct: 321 HS-MRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSK-GVYDIAFHTDGSL 378
Query: 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
GT D R+WDL G+ ++ EGH K +Y ++F +G VATG D +VWDLR
Sbjct: 379 AGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQR 438
Query: 355 RCIMFLEGHLKSVFSVDFSPD-GYHLATGSEDNAVKIW 391
+CI + H V V F P+ G L TG+ DN KIW
Sbjct: 439 KCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIW 476
Score = 558 (201.5 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 108/199 (54%), Positives = 134/199 (67%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF--------LGTCCWDHS 265
LA+ G KLWS+ + L GH V I FHP L +C D S
Sbjct: 245 LATACWSGLCKLWSVPDCNLVHTLRGHST-NVGAIVFHPKATVSLDKKDVNLASCAADGS 303
Query: 266 ---WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W L D P+A++EGH RV+R+ +HPSGRFLGT C+DHSWRLWDL +E+LHQEG
Sbjct: 304 VKLWSLESDEPVADIEGHS-MRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEG 362
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H K VY ++F DGS+ TGGLDAFGRVWDLRTGRCIMFLEGHLK ++ ++FSP+GYH+A
Sbjct: 363 HSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVA 422
Query: 381 TGSEDNAVKIWDLRKRRLL 399
TGS DN K+WDLR+R+ +
Sbjct: 423 TGSGDNTCKVWDLRQRKCI 441
Score = 233 (87.1 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 70/244 (28%), Positives = 106/244 (43%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P + S ++A+ + G KLW++ E V GH V + +HP G
Sbjct: 282 PKATVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHP---SGRF-- 336
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDT 270
L + D S +LW L+ + + EGH V I FH G GT D W L T
Sbjct: 337 LGTTCYDHSWRLWDLEAQEEILHQEGHSK-GVYDIAFHTDGSLAGTGGLDAFGRVWDLRT 395
Query: 271 P--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+ LEGH + + F P+G + T D++ ++WDL Q + + H V +
Sbjct: 396 GRCIMFLEGHLK-EIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGV 454
Query: 329 SFQGD-GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
F+ + G+ + TG D ++W + L GH V +D S DG +AT S D
Sbjct: 455 KFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRT 514
Query: 388 VKIW 391
K+W
Sbjct: 515 FKLW 518
Score = 199 (75.1 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 46/99 (46%), Positives = 66/99 (66%)
Query: 12 KQNTVHYGSLEEQERKRLAANKD--VDDDQEKYT----NVH-TSNVYMEIDDEMAKDKQA 64
K+ + YGSLEE+ER+RLA + + + K N++ +S E++D M++ +
Sbjct: 25 KRAPIFYGSLEEKERERLAKGESGLLGKEGMKAALEAGNINISSGEVFELEDHMSERQAE 84
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
+L EFERRK+AR +NVSTDD++VK LR LGEPI LFGE
Sbjct: 85 VLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGE 123
Score = 155 (59.6 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + I +FSP+ HVAT S CK+W + + + + T H V ++F P + G
Sbjct: 404 GHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEP--NHG 461
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
L + A D + K+W+ +PL L GHE +V + G+ + TC +D +++L
Sbjct: 462 NF--LLTGAYDNTAKIWTHPGWSPLKTLAGHEG-KVMGLDISLDGQLIATCSYDRTFKLW 518
Query: 270 T 270
T
Sbjct: 519 T 519
Score = 80 (33.2 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 18/71 (25%), Positives = 37/71 (52%)
Query: 160 FSPD-SQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
F P+ + T ++ K+WT P ++T GH+ V ++ + +G + +A+C+
Sbjct: 456 FEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLD---ISLDGQL--IATCS 510
Query: 219 QDGSVKLWSLD 229
D + KLW+ +
Sbjct: 511 YDRTFKLWTAE 521
Score = 39 (18.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 372 FSPDGYHLATGSEDNAVKIWDL 393
FSP+ LAT K+W +
Sbjct: 238 FSPNSKLLATACWSGLCKLWSV 259
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 707 (253.9 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 143/281 (50%), Positives = 180/281 (64%)
Query: 120 HLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLW 179
H IPE TRT++ QEL K L SL+ +CSQ+GD RPISYC FSP+S+ +ATA WSGLCKLW
Sbjct: 214 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW 273
Query: 180 TVPECELVQTFRGHDCNVGAIEFHPLPS---EGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
+VP+C L+ T RGH+ NVGAI FHP + + +LASCA DGSVKLWSLD D P+A+
Sbjct: 274 SVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD 333
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPS 291
+EGH RV+R+ +HPSGRFLGT C+D SWRL + + EGH V I FH
Sbjct: 334 IEGHT-VRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQD 391
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G GT D R+WDL G+ ++ EGH K +Y ++F +G +ATG D +VWDL
Sbjct: 392 GSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDL 451
Query: 352 RTGRCIMFLEGHLKSVFSVDFSP-DGYHLATGSEDNAVKIW 391
R RC+ + H V V F P G L TG+ DN KIW
Sbjct: 452 RQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 492
Score = 553 (199.7 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 110/207 (53%), Positives = 135/207 (65%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF--------LGTCCWDHS 265
LA+ G KLWS+ L L GH V I FHP L +C D S
Sbjct: 261 LATACWSGLCKLWSVPDCNLLHTLRGHNT-NVGAIVFHPKSTVSLDQKDVNLASCAADGS 319
Query: 266 ---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W LD+ P+A++EGH RV+R+ +HPSGRFLGT C+D SWRLWDL +E+LHQEG
Sbjct: 320 VKLWSLDSDEPVADIEGHT-VRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEG 378
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H VY ++F DGS+ TGGLDAFGRVWDLRTGRCIMFLEGHLK ++ ++FSP+GYH+A
Sbjct: 379 HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIA 438
Query: 381 TGSEDNAVKIWDLRKRRLLKWCTQLLP 407
TGS DN K+WDLR+RR C +P
Sbjct: 439 TGSGDNTCKVWDLRQRR----CVYTIP 461
Score = 240 (89.5 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 73/244 (29%), Positives = 105/244 (43%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P S S ++A+ + G KLW++ E V GH V + +HP G
Sbjct: 298 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHP---SGRF-- 352
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDT 270
L + D S +LW L+ + + EGH V I FH G GT D W L T
Sbjct: 353 LGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT 411
Query: 271 P--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+ LEGH + I F P+G + T D++ ++WDL Q + V H V +
Sbjct: 412 GRCIMFLEGHLK-EIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGV 470
Query: 329 SFQG-DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
F+ G+ + TG D ++W + L GH V +D S DG +AT S D
Sbjct: 471 KFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRT 530
Query: 388 VKIW 391
K+W
Sbjct: 531 FKLW 534
Score = 204 (76.9 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 49/107 (45%), Positives = 71/107 (66%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 33 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 92
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGE
Sbjct: 93 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGE 139
Score = 195 (73.7 bits), Expect = 3.2e-29, Sum P(2) = 3.2e-29
Identities = 55/181 (30%), Positives = 75/181 (41%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL----EGHEPFRVSRIKFHPSGRF----- 294
+S F P+ + L T CW +L P NL GH V I FHP
Sbjct: 249 ISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNT-NVGAIVFHPKSTVSLDQK 307
Query: 295 ---LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
L +C D S +LW L+ + V EGH V + + G + T D R+WDL
Sbjct: 308 DVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDL 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
I+ EGH V+ + F DG TG D ++WDLR R + + L G
Sbjct: 368 EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 427
Query: 412 V 412
+
Sbjct: 428 I 428
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 707 (253.9 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 143/281 (50%), Positives = 180/281 (64%)
Query: 120 HLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLW 179
H IPE TRT++ QEL K L SL+ +CSQ+GD RPISYC FSP+S+ +ATA WSGLCKLW
Sbjct: 216 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW 275
Query: 180 TVPECELVQTFRGHDCNVGAIEFHPLPS---EGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
+VP+C L+ T RGH+ NVGAI FHP + + +LASCA DGSVKLWSLD D P+A+
Sbjct: 276 SVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD 335
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPS 291
+EGH RV+R+ +HPSGRFLGT C+D SWRL + + EGH V I FH
Sbjct: 336 IEGHT-VRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQD 393
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G GT D R+WDL G+ ++ EGH K +Y ++F +G +ATG D +VWDL
Sbjct: 394 GSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDL 453
Query: 352 RTGRCIMFLEGHLKSVFSVDFSP-DGYHLATGSEDNAVKIW 391
R RC+ + H V V F P G L TG+ DN KIW
Sbjct: 454 RQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 494
Score = 553 (199.7 bits), Expect = 4.1e-73, Sum P(2) = 4.1e-73
Identities = 110/207 (53%), Positives = 135/207 (65%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF--------LGTCCWDHS 265
LA+ G KLWS+ L L GH V I FHP L +C D S
Sbjct: 263 LATACWSGLCKLWSVPDCNLLHTLRGHNT-NVGAIVFHPKSTVSLDQKDVNLASCAADGS 321
Query: 266 ---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W LD+ P+A++EGH RV+R+ +HPSGRFLGT C+D SWRLWDL +E+LHQEG
Sbjct: 322 VKLWSLDSDEPVADIEGHT-VRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEG 380
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H VY ++F DGS+ TGGLDAFGRVWDLRTGRCIMFLEGHLK ++ ++FSP+GYH+A
Sbjct: 381 HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIA 440
Query: 381 TGSEDNAVKIWDLRKRRLLKWCTQLLP 407
TGS DN K+WDLR+RR C +P
Sbjct: 441 TGSGDNTCKVWDLRQRR----CVYTIP 463
Score = 240 (89.5 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 73/244 (29%), Positives = 105/244 (43%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P S S ++A+ + G KLW++ E V GH V + +HP G
Sbjct: 300 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHP---SGRF-- 354
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDT 270
L + D S +LW L+ + + EGH V I FH G GT D W L T
Sbjct: 355 LGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT 413
Query: 271 P--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+ LEGH + I F P+G + T D++ ++WDL Q + V H V +
Sbjct: 414 GRCIMFLEGHLK-EIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGV 472
Query: 329 SFQG-DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
F+ G+ + TG D ++W + L GH V +D S DG +AT S D
Sbjct: 473 KFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRT 532
Query: 388 VKIW 391
K+W
Sbjct: 533 FKLW 536
Score = 204 (76.9 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 49/107 (45%), Positives = 71/107 (66%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 35 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 94
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGE
Sbjct: 95 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGE 141
Score = 195 (73.7 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 55/181 (30%), Positives = 75/181 (41%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL----EGHEPFRVSRIKFHPSGRF----- 294
+S F P+ + L T CW +L P NL GH V I FHP
Sbjct: 251 ISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNT-NVGAIVFHPKSTVSLDQK 309
Query: 295 ---LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
L +C D S +LW L+ + V EGH V + + G + T D R+WDL
Sbjct: 310 DVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDL 369
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
I+ EGH V+ + F DG TG D ++WDLR R + + L G
Sbjct: 370 EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 429
Query: 412 V 412
+
Sbjct: 430 I 430
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 707 (253.9 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 143/281 (50%), Positives = 180/281 (64%)
Query: 120 HLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLW 179
H IPE TRT++ QEL K L SL+ +CSQ+GD RPISYC FSP+S+ +ATA WSGLCKLW
Sbjct: 198 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW 257
Query: 180 TVPECELVQTFRGHDCNVGAIEFHPLPS---EGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
+VP+C L+ T RGH+ NVGAI FHP + + +LASCA DGSVKLWSLD D P+A+
Sbjct: 258 SVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD 317
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPS 291
+EGH RV+R+ +HPSGRFLGT C+D SWRL + + EGH V I FH
Sbjct: 318 IEGHT-VRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQD 375
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G GT D R+WDL G+ ++ EGH K +Y ++F +G +ATG D +VWDL
Sbjct: 376 GSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDL 435
Query: 352 RTGRCIMFLEGHLKSVFSVDFSP-DGYHLATGSEDNAVKIW 391
R RC+ + H V V F P G L TG+ DN KIW
Sbjct: 436 RQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW 476
Score = 553 (199.7 bits), Expect = 5.3e-73, Sum P(2) = 5.3e-73
Identities = 110/207 (53%), Positives = 135/207 (65%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF--------LGTCCWDHS 265
LA+ G KLWS+ L L GH V I FHP L +C D S
Sbjct: 245 LATACWSGLCKLWSVPDCNLLHTLRGHNT-NVGAIVFHPKSTVSLDQKDVNLASCAADGS 303
Query: 266 ---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W LD+ P+A++EGH RV+R+ +HPSGRFLGT C+D SWRLWDL +E+LHQEG
Sbjct: 304 VKLWSLDSDEPVADIEGHT-VRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEG 362
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H VY ++F DGS+ TGGLDAFGRVWDLRTGRCIMFLEGHLK ++ ++FSP+GYH+A
Sbjct: 363 HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIA 422
Query: 381 TGSEDNAVKIWDLRKRRLLKWCTQLLP 407
TGS DN K+WDLR+RR C +P
Sbjct: 423 TGSGDNTCKVWDLRQRR----CVYTIP 445
Score = 241 (89.9 bits), Expect = 1.8e-34, Sum P(2) = 1.8e-34
Identities = 73/244 (29%), Positives = 105/244 (43%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P S S ++A+ + G KLW++ E V GH V + +HP G
Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHP---SGRF-- 336
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDT 270
L + D S +LW L+ + + EGH V I FH G GT D W L T
Sbjct: 337 LGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT 395
Query: 271 P--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+ LEGH + I F P+G + T D++ ++WDL Q + V H V +
Sbjct: 396 GRCIMFLEGHLK-EIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGV 454
Query: 329 SFQG-DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
F+ G+ + TG D ++W + L GH V +D S DG +AT S D
Sbjct: 455 KFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRT 514
Query: 388 VKIW 391
K+W
Sbjct: 515 FKLW 518
Score = 203 (76.5 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 49/107 (45%), Positives = 71/107 (66%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGLLGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGE
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGE 123
Score = 197 (74.4 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 55/181 (30%), Positives = 76/181 (41%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL----EGHEPFRVSRIKFHPSGRF----- 294
+S F P+ + L T CW +L P NL GH V I FHP
Sbjct: 233 ISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNT-NVGAIVFHPKSTVSLDQK 291
Query: 295 ---LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
L +C D S +LW L+ + V EGH V +++ G + T D R+WDL
Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDL 351
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
I+ EGH V+ + F DG TG D ++WDLR R + + L G
Sbjct: 352 EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 411
Query: 412 V 412
+
Sbjct: 412 I 412
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 706 (253.6 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 143/281 (50%), Positives = 180/281 (64%)
Query: 120 HLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLW 179
H IPE TRT++ QEL K L SL+ +CSQ+GD RPISYC FSP+S+ +ATA WSGLCKLW
Sbjct: 198 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW 257
Query: 180 TVPECELVQTFRGHDCNVGAIEFHPLPS---EGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
+VP+C L+ T RGH+ NVGAI FHP + + +LASCA DGSVKLWSLD D P+A+
Sbjct: 258 SVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD 317
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPS 291
+EGH RV+R+ +HPSGRFLGT C+D SWRL + + EGH V I FH
Sbjct: 318 IEGHT-VRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQD 375
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G GT D R+WDL G+ ++ EGH K +Y ++F +G +ATG D +VWDL
Sbjct: 376 GSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDL 435
Query: 352 RTGRCIMFLEGHLKSVFSVDFSP-DGYHLATGSEDNAVKIW 391
R RC+ + H V V F P G L TG+ DN KIW
Sbjct: 436 RQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIW 476
Score = 554 (200.1 bits), Expect = 3.2e-73, Sum P(2) = 3.2e-73
Identities = 110/207 (53%), Positives = 136/207 (65%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF--------LGTCCWDHS 265
LA+ G KLWS+ + L L GH V I FHP L +C D S
Sbjct: 245 LATACWSGLCKLWSVPDCSLLHTLRGHNT-NVGAIVFHPKSTVSLDQKDVNLASCAADGS 303
Query: 266 ---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W LD+ P+A++EGH RV+R+ +HPSGRFLGT C+D SWRLWDL +E+LHQEG
Sbjct: 304 VKLWSLDSDEPVADIEGHT-VRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEG 362
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H VY ++F DGS+ TGGLDAFGRVWDLRTGRCIMFLEGHLK ++ ++FSP+GYH+A
Sbjct: 363 HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIA 422
Query: 381 TGSEDNAVKIWDLRKRRLLKWCTQLLP 407
TGS DN K+WDLR+RR C +P
Sbjct: 423 TGSGDNTCKVWDLRQRR----CVYTIP 445
Score = 239 (89.2 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 73/244 (29%), Positives = 104/244 (42%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P S S ++A+ + G KLW++ E V GH V + +HP G
Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHP---SGRF-- 336
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDT 270
L + D S +LW L+ + + EGH V I FH G GT D W L T
Sbjct: 337 LGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQDGSLAGTGGLDAFGRVWDLRT 395
Query: 271 P--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+ LEGH + I F P+G + T D++ ++WDL Q + V H V +
Sbjct: 396 GRCIMFLEGHLK-EIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGV 454
Query: 329 SFQG-DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
F+ G + TG D ++W + L GH V +D S DG +AT S D
Sbjct: 455 KFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRT 514
Query: 388 VKIW 391
K+W
Sbjct: 515 FKLW 518
Score = 204 (76.9 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 49/107 (45%), Positives = 71/107 (66%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGE
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGE 123
Score = 195 (73.7 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 55/181 (30%), Positives = 75/181 (41%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRF----- 294
+S F P+ + L T CW +L P L L GH V I FHP
Sbjct: 233 ISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNT-NVGAIVFHPKSTVSLDQK 291
Query: 295 ---LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
L +C D S +LW L+ + V EGH V + + G + T D R+WDL
Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDL 351
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
I+ EGH V+ + F DG TG D ++WDLR R + + L G
Sbjct: 352 EAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYG 411
Query: 412 V 412
+
Sbjct: 412 I 412
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 579 (208.9 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 148/403 (36%), Positives = 209/403 (51%)
Query: 21 LEEQERKRLAANKDVD-DDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVN 79
LEE ERK+ A +V DD E +N+ N + E +++ L+E +N
Sbjct: 116 LEEFERKKRARQINVSTDDTEIKSNLRQLNEPICYFGEGPAERRRRLKELLAGLGENAIN 175
Query: 80 VST-DDNQVKLNLRQLGE-------P----IC-LFGEEYSXXXXXXXXXXXXXHLHIPEA 126
+D + K R+ + P I L+ +YS L +P A
Sbjct: 176 KRQYEDEERKQQQREQDQATWYHEGPDSLRIARLWLADYSLPRAKDRLVRAREALEVPSA 235
Query: 127 TRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECEL 186
R R E+QK L SL+ CSQVGDTRP+S +FS DS + T+SWSGLCKLW+VP+CEL
Sbjct: 236 ARAGRMVEMQKKLQSLAPLCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCEL 295
Query: 187 VQTFRGHDCNVGAIEFHP--LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
QT RGH VG + P E V ++AS DG+VKLW + + +A++ GH P R
Sbjct: 296 KQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHR 355
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-D----TPLANLEGH-EPFRVSRIKFHPSGRFLGTC 298
VS++ FHPSGRFL T C+D SWRL D T + + EGH +P V + +H G L T
Sbjct: 356 VSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKP--VHCLSYHSDGSVLVTG 413
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
D R+WDL G+ ++ EGH V+ + F +G +ATG D ++WDLR + +
Sbjct: 414 GLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVY 473
Query: 359 FLEGHLKSVFSVDFSPD-GYHLATGSEDNAVKIWDLRKRRLLK 400
+ H + V + + G L T S D+ KIW + + LK
Sbjct: 474 TIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLK 516
Score = 249 (92.7 bits), Expect = 4.0e-42, Sum P(3) = 4.0e-42
Identities = 70/233 (30%), Positives = 110/233 (47%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGH-DCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL 225
+A+ G KLW E + GH V + FHP G LA+ D S +L
Sbjct: 325 MASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHP---SGRF--LATACYDSSWRL 379
Query: 226 WSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFL---GTCCWDHSWRLDTP--LANLEGHE 279
W L++ T + + EGH +P V + +H G L G + W L T + LEGH
Sbjct: 380 WDLEQKTEVLHQEGHAKP--VHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHL 437
Query: 280 PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD-GSVVA 338
V + F P+G + T D++ ++WDL + Q V H + + +Q + GS +
Sbjct: 438 G-AVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLV 496
Query: 339 TGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
T D+ ++W +T + + L+GH V SVD +P+ ++AT S D K+W
Sbjct: 497 TCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 190 (71.9 bits), Expect = 4.0e-42, Sum P(3) = 4.0e-42
Identities = 34/53 (64%), Positives = 44/53 (83%)
Query: 51 YMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
Y +++ EM +DK ALL+EFER+K+AR +NVSTDD ++K NLRQL EPIC FGE
Sbjct: 101 YFDLEMEMERDKVALLEEFERKKRARQINVSTDDTEIKSNLRQLNEPICYFGE 153
Score = 141 (54.7 bits), Expect = 7.6e-30, Sum P(3) = 7.6e-30
Identities = 57/202 (28%), Positives = 81/202 (40%)
Query: 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRL-DTPLAN-LEGH 278
KL SL PL + G + VS F L T W W + D L L GH
Sbjct: 247 KLQSL---APLCSQVG-DTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGH 302
Query: 279 EPFRVSRIKFHPSGRF-------LGTCCWDHSWRLWDLNQGQEVLHQEGHGKP--VYCMS 329
+ V + P + + + D + +LW N + + GH P V ++
Sbjct: 303 ASY-VGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGH-MPHRVSKVA 360
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
F G +AT D+ R+WDL ++ EGH K V + + DG L TG D +
Sbjct: 361 FHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGR 420
Query: 390 IWDLRKRRLLKWCTQLLPNSIG 411
+WDLR R C L +G
Sbjct: 421 VWDLRTGR----CIMFLEGHLG 438
Score = 116 (45.9 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 20/28 (71%), Positives = 25/28 (89%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKR 28
MSDD+D+ Y+K+Q T+HYGSLEE ERKR
Sbjct: 1 MSDDDDIQYIKRQRTLHYGSLEESERKR 28
Score = 70 (29.7 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+ T S+ K+W+ + ++T +GHD V +++ P S+ +A+ + D + KLW
Sbjct: 495 LVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAP-NSQ----YIATTSFDRTFKLW 549
Query: 227 SLD 229
S D
Sbjct: 550 SPD 552
Score = 57 (25.1 bits), Expect = 3.6e-21, Sum P(3) = 3.6e-21
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 151 DTRPISYCSFSPDSQHVATASWSGLCKLWT 180
D + IS +P+SQ++AT S+ KLW+
Sbjct: 522 DNKVISV-DIAPNSQYIATTSFDRTFKLWS 550
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 465 (168.7 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
Identities = 97/276 (35%), Positives = 147/276 (53%)
Query: 124 PEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE 183
P + QE K + ++++ SQV DTRP+++C FS DS+H+ TA WSG +W +
Sbjct: 176 PAHEKALARQEAHKWVQQINLHASQVADTRPVAFCEFSADSEHIVTAGWSGSVAVWKREQ 235
Query: 184 CELVQTFRGHDCNVGAIEFHP---LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
C F GH G FHP ++ + ++ SC+ DG+V LWSL +++P+ LE H
Sbjct: 236 CAQEIKFIGHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGELEQH 295
Query: 241 EPFRVSRIKFHPSGRFLGTCCWDHSWRL-D-TPLANL---EGHEPFRVSRIKFHPSGRFL 295
P RVS++ FHP+G L T C+D +WR+ D T L EGH V+ + FHP G
Sbjct: 296 -PQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSK-SVADVAFHPDGSVA 353
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D R+WD+ G+ ++ +GH K ++ + + +G + TG D +VWDLR R
Sbjct: 354 LTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRR 413
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
+ H V V G +L + S D +K+W
Sbjct: 414 NTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMW 449
Score = 436 (158.5 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 86/198 (43%), Positives = 123/198 (62%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF---------LGTCCWDH 264
+ + GSV +W ++ GH + +FHP G F + +C +D
Sbjct: 219 IVTAGWSGSVAVWKREQCAQEIKFIGHSS-QAGCARFHP-GAFTQNDYSSLNVVSCSYDG 276
Query: 265 S---WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE 319
+ W L ++P+ LE H P RVS++ FHP+G L T C+D +WR++DL +E+L+QE
Sbjct: 277 TVLLWSLSQESPIGELEQH-PQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQE 335
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379
GH K V ++F DGSV TGG D +GRVWD+RTGRCIMFL+GH K + SV++ P+GY +
Sbjct: 336 GHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEM 395
Query: 380 ATGSEDNAVKIWDLRKRR 397
TGS DN++K+WDLR RR
Sbjct: 396 ITGSSDNSMKVWDLRMRR 413
Score = 214 (80.4 bits), Expect = 7.6e-24, Sum P(2) = 7.6e-24
Identities = 62/254 (24%), Positives = 107/254 (42%)
Query: 145 YCSQVGDTR--PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEF 202
+ SQ G R P ++ S +V + S+ G LW++ + + H V + F
Sbjct: 245 HSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAF 304
Query: 203 HPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL---GT 259
HP G LA+ D + +++ L L EGH V+ + FHP G G
Sbjct: 305 HP---NGH--HLATACFDSTWRMYDLTTKKELLYQEGHSK-SVADVAFHPDGSVALTGGH 358
Query: 260 CCWDHSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH 317
C+ W + T + L+GH + +++ P+G + T D+S ++WDL +
Sbjct: 359 DCYGRVWDMRTGRCIMFLDGHTK-EIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYT 417
Query: 318 QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY 377
H V + G + + D ++W + + L+GH + VD SPDG
Sbjct: 418 MPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVDISPDGQ 477
Query: 378 HLATGSEDNAVKIW 391
+ + + D K+W
Sbjct: 478 WMCSSAFDRTFKLW 491
Score = 171 (65.3 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 49/169 (28%), Positives = 80/169 (47%)
Query: 245 VSRIKFHPSGRFLGTCCWDHS---WRLDTPLANLE--GHEPFRVSRIKFHPSGRF----- 294
V+ +F + T W S W+ + ++ GH + +FHP G F
Sbjct: 207 VAFCEFSADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSS-QAGCARFHP-GAFTQNDY 264
Query: 295 ----LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
+ +C +D + LW L+Q + E H + V ++F +G +AT D+ R++D
Sbjct: 265 SSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYD 324
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
L T + +++ EGH KSV V F PDG TG D ++WD+R R +
Sbjct: 325 LTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCI 373
Score = 131 (51.2 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
Identities = 33/88 (37%), Positives = 50/88 (56%)
Query: 18 YGSLEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQA-LLQEFERRKKAR 76
+GSL E + N ++ Q+ + S ME+ ++ A + EF+RR++AR
Sbjct: 16 FGSLANAE----SVNAILNAQQQNHGPT-VSLERMEVSNQADSRHDAEMFAEFDRRRRAR 70
Query: 77 HVNVSTDDNQVKLNLRQLGEPICLFGEE 104
+ + TDD QVKL LR L +PICLFGE+
Sbjct: 71 TLTLPTDDVQVKLKLRALNQPICLFGED 98
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 479 (173.7 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 94/191 (49%), Positives = 129/191 (67%)
Query: 214 LASCAQDGSVKLWSLDKDT-PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD 269
LA+C+ G KLW + + T +A L+ H+ R + + F P L T D + W+ D
Sbjct: 270 LATCSLSGVTKLWEMPQVTNTIAVLKDHKE-RATDVVFSPVDDCLATASADRTAKLWKTD 328
Query: 270 -TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
T L EGH R++R+ FHPSG++LGT +D +WRLWD+N G E+L QEGH + VY +
Sbjct: 329 GTLLQTFEGHLD-RLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGI 387
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+FQ DG++ A+ GLD+ RVWDLRTGR I+ +GH+K VFSV+FSP+GYHLA+G EDN
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQC 447
Query: 389 KIWDLRKRRLL 399
+IWDLR R+ L
Sbjct: 448 RIWDLRMRKSL 458
Score = 234 (87.4 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 72/239 (30%), Positives = 106/239 (44%)
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ 219
FSP +ATAS KLW + L+QTF GH + + FHP G L + +
Sbjct: 306 FSPVDDCLATASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHP---SGKY--LGTTSY 359
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTPLANL- 275
D + +LW ++ L EGH V I F G +C D W L T + L
Sbjct: 360 DKTWRLWDINTGAELLLQEGHSR-SVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILV 418
Query: 276 -EGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG- 332
+GH +P V + F P+G L + D+ R+WDL + + H V + ++
Sbjct: 419 FQGHIKP--VFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQ 476
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
+G +AT D +W R + L GH V S+D + D +AT S D +K+W
Sbjct: 477 EGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 163 (62.4 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 62/233 (26%), Positives = 100/233 (42%)
Query: 126 ATRTA-RNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE- 183
AT +A R +L K T ++ + G ++ +F P +++ T S+ +LW +
Sbjct: 314 ATASADRTAKLWK--TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTG 371
Query: 184 CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH-EP 242
EL+ GH +V I F +GA+ ASC D ++W L + +GH +P
Sbjct: 372 AELLLQ-EGHSRSVYGIAFQ---QDGALA--ASCGLDSLARVWDLRTGRSILVFQGHIKP 425
Query: 243 FRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPS-GRFLG 296
V + F P+G L + D+ W R+ L + H VS++K+ P G FL
Sbjct: 426 --VFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANL-VSQVKYEPQEGYFLA 482
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
T +D +W V GH V + D S +AT D ++W
Sbjct: 483 TASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 120 (47.3 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 32/131 (24%), Positives = 54/131 (41%)
Query: 264 HSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHG 322
H+ + +N P ++ F G+ L TC +LW++ Q + + H
Sbjct: 241 HAKHMALDCSNFGDDRP--LTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHK 298
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
+ + F +AT D ++W G + EGHL + V F P G +L T
Sbjct: 299 ERATDVVFSPVDDCLATASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYLGTT 357
Query: 383 SEDNAVKIWDL 393
S D ++WD+
Sbjct: 358 SYDKTWRLWDI 368
Score = 111 (44.1 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 36/136 (26%), Positives = 61/136 (44%)
Query: 140 TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGA 199
T SI Q G +P+ +FSP+ H+A+ C++W + + + H V
Sbjct: 412 TGRSILVFQ-GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQ 470
Query: 200 IEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLA-NLEGHEPFRVSRIKFHPSGRFLG 258
+++ P EG LA+ + D V +WS +D L +L GHE +V+ + +
Sbjct: 471 VKYEP--QEGYF--LATASYDMKVNIWS-GRDFSLVKSLAGHES-KVASLDITADSSCIA 524
Query: 259 TCCWDHSWRLDTPLAN 274
T D + +L T N
Sbjct: 525 TVSHDRTIKLWTSSGN 540
Score = 93 (37.8 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 51 YMEIDDE--MAKDKQA-LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEE 104
++EI +E +++Q LQ+ +++A + V T+D V+ LR+LGEPI LFGE+
Sbjct: 87 HIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPITLFGEQ 143
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 372 (136.0 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 69/136 (50%), Positives = 94/136 (69%)
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
W L DTPLA L GH RV R+ FHPSGRFL + D SWRLWD+ + E+L QEGH +
Sbjct: 286 WSLSQDTPLATLSGHTQ-RVCRVDFHPSGRFLASASEDTSWRLWDVEKRTELLLQEGHSR 344
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL----KSVFSVDFSPDGYHL 379
V+ +SF GDGS++A+ G D+ GR+WDLRTGR IM L+GH+ K ++++D+ DG+ +
Sbjct: 345 GVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRV 404
Query: 380 ATGSEDNAVKIWDLRK 395
+ S D +K WD+RK
Sbjct: 405 LSASADGWIKCWDVRK 420
Score = 364 (133.2 bits), Expect = 1.1e-49, Sum P(3) = 1.1e-49
Identities = 87/245 (35%), Positives = 125/245 (51%)
Query: 123 IPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVP 182
IP+ T +++++ L + SQ R IS SP+ + VAT +W G KL+++P
Sbjct: 177 IPQRTHMRARKQVKERLQGFELQGSQTAGQRHISITRISPNGETVATGNWGGQVKLFSIP 236
Query: 183 ECELVQTFRGHDCNVGAIEFHPLPS--EGAVCS----LASCAQDGSVKLWSLDKDTPLAN 236
+ RGH V + + P + E V + LA+ +G V LWSL +DTPLA
Sbjct: 237 NLDETMNLRGHTNKVSGMCWFPGATLQESNVSAESVNLATGGAEGQVNLWSLSQDTPLAT 296
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-D----TPLANLEGHEPFRVSRIKFHPS 291
L GH RV R+ FHPSGRFL + D SWRL D T L EGH V + F+
Sbjct: 297 LSGHTQ-RVCRVDFHPSGRFLASASEDTSWRLWDVEKRTELLLQEGHSR-GVFAVSFNGD 354
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVL----HQEGHGKPVYCMSFQGDGSVVATGGLDAFGR 347
G L + D R+WDL G+ ++ H +GH KP+Y + + DG V + D + +
Sbjct: 355 GSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIK 414
Query: 348 VWDLR 352
WD+R
Sbjct: 415 CWDVR 419
Score = 155 (59.6 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 32/94 (34%), Positives = 50/94 (53%)
Query: 306 LWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365
LW L+Q + GH + V + F G +A+ D R+WD+ ++ EGH +
Sbjct: 285 LWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRTELLLQEGHSR 344
Query: 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
VF+V F+ DG LA+ +D+ +IWDLR R +
Sbjct: 345 GVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTI 378
Score = 142 (55.0 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 40/131 (30%), Positives = 61/131 (46%)
Query: 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS-FQG--- 332
G ++RI P+G + T W +L+ + E ++ GH V M F G
Sbjct: 205 GQRHISITRIS--PNGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATL 262
Query: 333 -DGSV------VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
+ +V +ATGG + +W L + L GH + V VDF P G LA+ SED
Sbjct: 263 QESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASED 322
Query: 386 NAVKIWDLRKR 396
+ ++WD+ KR
Sbjct: 323 TSWRLWDVEKR 333
Score = 107 (42.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 50/209 (23%), Positives = 84/209 (40%)
Query: 148 QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGH-DCNVGAIEFHPLP 206
Q G +R + SF+ D +A+A + ++W + + GH D ++ I
Sbjct: 339 QEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALDWG 398
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 266
S+G + S + DG +K W + K + H VS +++ F G
Sbjct: 399 SDGH--RVLSASADGWIKCWDVRKVQRTGGVGAHTS-AVSDMRW-----FKG-------- 442
Query: 267 RLDTPLANLE-GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
LD PL + G + + K SG FL + +DH ++ + V GH PV
Sbjct: 443 -LDGPLDGVPLGVDEKGQAMPK--KSGTFLVSSGFDHKVNIYSADDWALVQSLSGHTGPV 499
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
+ DG + +GG D ++W G
Sbjct: 500 ASVDVSRDGRWIVSGGHDRTVKLWGRNDG 528
Score = 97 (39.2 bits), Expect = 1.1e-49, Sum P(3) = 1.1e-49
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEE 104
A++ F+R+K A + V T+D +V+ LR +GEPI LFGE+
Sbjct: 51 AIMSGFDRKKIADAIPVPTNDVRVRARLRDMGEPITLFGED 91
Score = 86 (35.3 bits), Expect = 1.1e-49, Sum P(3) = 1.1e-49
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
G+ + + G D ++ + L GH V SVD S DG + +G D VK+W
Sbjct: 466 GTFLVSSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLW 523
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 494 (179.0 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 131/367 (35%), Positives = 188/367 (51%)
Query: 53 EIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNL-RQLGEPICLFGEEYSXXXXX 111
EI+ + K+ L +FE +++ R Q KL L +QL EE
Sbjct: 176 EIELSIQKENDNLKNQFEEKQQKRI--------QKKLRLHQQLENDNMNIDEEEDDDDDD 227
Query: 112 XXXXXXXXHLHIPEATRTARNQELQ-KHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATA 170
++ + T ++ E K L + SQ+GD RP+S FSPD ++VA
Sbjct: 228 DGDDGDDLNMMVKIKTEFEKDMEYTVKELKNYYSSVSQIGDDRPLSMGVFSPDGKNVAIG 287
Query: 171 SWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPS-EGA----VCSLASCAQDGSVKL 225
SWSG+ K+W+V + Q GH V I +HPL +G + ++A+ + D + KL
Sbjct: 288 SWSGVSKVWSVSG-QKKQILAGHSQRVSCIAYHPLSGIDGNHTKNLVNIATTSADSTCKL 346
Query: 226 WSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-PLANLEGHEPFRVS 284
W PL N + + + D + ++T P+ +LEGH V+
Sbjct: 347 W------PLLNNDNNNNNNNNNDNEEEDN--------DATVSIETQPILSLEGHSDV-VN 391
Query: 285 RIKFHPSGRFLGTCCWDHSWRLWDLNQGQE-VLHQEGHGKPVYCMSFQGDGSVVATGGLD 343
R FHP GR++ T D SWRLWDL G + +L QEGH V +S Q DGS++ATG D
Sbjct: 392 RCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHSDGVMGISIQSDGSLLATGSQD 451
Query: 344 AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
R+WDLR+GR I++ +GH K V SVD+SP+GY LA+ SEDN V IWD+RK+ + C
Sbjct: 452 GLVRIWDLRSGRPILYFQGHSKQVISVDWSPNGYQLASSSEDNTVVIWDIRKKE--QSCQ 509
Query: 404 QLLPNSI 410
L NSI
Sbjct: 510 ILAHNSI 516
Score = 140 (54.3 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 61/230 (26%), Positives = 92/230 (40%)
Query: 183 ECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP-LANLEGHE 241
E + + + GH V FHP G + +S D S +LW L+ L + EGH
Sbjct: 376 ETQPILSLEGHSDVVNRCSFHPC---GRYITTSS--NDKSWRLWDLESGGKCLLDQEGHS 430
Query: 242 PFRVSRIKFHPSGRFLGTCCWD---HSWRLDT--PLANLEGHEPFRVSRIKFHPSGRFLG 296
V I G L T D W L + P+ +GH +V + + P+G L
Sbjct: 431 D-GVMGISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSK-QVISVDWSPNGYQLA 488
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ-------------GDGSV--VATGG 341
+ D++ +WD+ + ++ H V C+ FQ G V +AT
Sbjct: 489 SSSEDNTVVIWDIRKKEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCS 548
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
D + W T + EGH V S+D + + L+T S D KIW
Sbjct: 549 FDGKIKTWSPNTWSPLATFEGHSSKVTSIDLT-NSKILST-SFDKTWKIW 596
Score = 119 (46.9 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEE 104
Q +L E+ER+K+A+ V V T DN VKL LR+L EPI LFGE+
Sbjct: 55 QKVLDEYERKKRAKQVIVPTIDNLVKLKLRELLEPIILFGEK 96
Score = 114 (45.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 33/129 (25%), Positives = 61/129 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE- 208
G ++ + +SP+ +A++S +W + + E H+ V ++F ++
Sbjct: 470 GHSKQVISVDWSPNGYQLASSSEDNTVVIWDIRKKEQSCQILAHNSIVSCVKFQKQSTQT 529
Query: 209 ---------GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGT 259
G V LA+C+ DG +K WS + +PLA EGH +V+ I S + L T
Sbjct: 530 NNNNNNSSPGCVNYLATCSFDGKIKTWSPNTWSPLATFEGHSS-KVTSIDLTNS-KILST 587
Query: 260 CCWDHSWRL 268
+D +W++
Sbjct: 588 S-FDKTWKI 595
Score = 43 (20.2 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 23 EQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFE 70
E + + +D DDD + + N+ ++I E KD + ++E +
Sbjct: 211 ENDNMNIDEEED-DDDDDDGDDGDDLNMMVKIKTEFEKDMEYTVKELK 257
Score = 38 (18.4 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 9 YVKKQNTVHYGSLEEQERKRLA 30
+ K+ H L+E ERK+ A
Sbjct: 46 HTKRSQEQHQKVLDEYERKKRA 67
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 397 (144.8 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 73/150 (48%), Positives = 99/150 (66%)
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR 305
S + F G C W S D PLA LEGH RV R +FHPSG+++ + +D +WR
Sbjct: 261 SAVNFVSGGGEGNVCLW--SLDKDQPLATLEGHSG-RVCRTEFHPSGKYIASASYDTTWR 317
Query: 306 LWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365
LWD+ E+ QEGH + VY ++F DGS++A+GGLD+ GRVWDLRTGR +M LEGH++
Sbjct: 318 LWDVETTAELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIR 377
Query: 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
+F +D+ DGY + +GS D VK WDLR+
Sbjct: 378 EIFGLDWGVDGYRVLSGSGDGWVKCWDLRQ 407
Score = 389 (142.0 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 97/259 (37%), Positives = 139/259 (53%)
Query: 123 IPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVP 182
IP T + +++ L + +Y SQ+ RP+S C F+PD Q +AT +W G +L VP
Sbjct: 168 IPLRTHIKHRKAIKEKLHNFDLYGSQIAGDRPVSICRFAPDGQTIATGNWGGGIRLLGVP 227
Query: 183 ECELVQTFRGHDCNVGAIEFHP---LP----SEGAVCSLASCAQDGSVKLWSLDKDTPLA 235
E + +GH VG + + P LP SE AV + S +G+V LWSLDKD PLA
Sbjct: 228 NLEEKLSVKGHTDRVGGLSWFPGATLPESNVSESAV-NFVSGGGEGNVCLWSLDKDQPLA 286
Query: 236 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPL-ANL---EGHEPFRVSRIKFHP 290
LEGH RV R +FHPSG+++ + +D +WRL D A L EGH V + F+
Sbjct: 287 TLEGHSG-RVCRTEFHPSGKYIASASYDTTWRLWDVETTAELQLQEGHSR-EVYTVAFNN 344
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G L + D R+WDL G+ V+ EGH + ++ + + DG V +G D + + WD
Sbjct: 345 DGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDWGVDGYRVLSGSGDGWVKCWD 404
Query: 351 LRTGRCIMFLEGHLKSVFS 369
LR + + H KSV S
Sbjct: 405 LRQVKNTGGIGAH-KSVVS 422
Score = 163 (62.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 52/180 (28%), Positives = 79/180 (43%)
Query: 235 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLE------GHEPFRVSRIKF 288
+ + G P VS +F P G+ + T W RL + NLE GH RV + +
Sbjct: 192 SQIAGDRP--VSICRFAPDGQTIATGNWGGGIRL-LGVPNLEEKLSVKGHTD-RVGGLSW 247
Query: 289 HPSGRFLGTCCWDHSWR-----------LWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVV 337
P + + + LW L++ Q + EGH V F G +
Sbjct: 248 FPGATLPESNVSESAVNFVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYI 307
Query: 338 ATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
A+ D R+WD+ T + EGH + V++V F+ DG LA+G D+ ++WDLR R
Sbjct: 308 ASASYDTTWRLWDVETTAELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGR 367
Score = 119 (46.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 62/254 (24%), Positives = 103/254 (40%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + + F P +++A+AS+ +LW V +Q GH V + F+ ++G
Sbjct: 290 GHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETTAELQLQEGHSREVYTVAFN---NDG 346
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGH--EPFRVS-RIKFHP--SGRFLGTC-CWD 263
++ LAS D ++W L + LEGH E F + + + SG G CWD
Sbjct: 347 SL--LASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDWGVDGYRVLSGSGDGWVKCWD 404
Query: 264 HSWRLDTPLANLEGHEPFRVSRIKFHP---SGRFLGTCCWDHSWRLWDLNQGQEV-LHQE 319
+T + H+ VS ++++ S FL T +GQ + +
Sbjct: 405 LRQVKNT--GGIGAHKSV-VSDVRWYKGSESASFLPT------------TEGQPGRMDVD 449
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379
G PV G+ + G D ++ I L GH +V S D S + +
Sbjct: 450 GATAPVQPRK---SGTFFVSSGFDKNVNIFSADDWSLIKTLSGHSGNVLSADISNNAQWI 506
Query: 380 ATGSEDNAVKIWDL 393
A+ D VK+W +
Sbjct: 507 ASCGHDRTVKLWGI 520
Score = 118 (46.6 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 59 AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
A+ A++ +FER+++A + V TDD +V+ LR+LGEPI LFGE
Sbjct: 42 AEKASAIISQFERKRRAAAMAVPTDDTRVRARLRELGEPITLFGE 86
Score = 66 (28.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD 229
+++ + L++T GH NV + + S A +ASC D +VKLW ++
Sbjct: 475 IFSADDWSLIKTLSGHSGNVLSADI----SNNAQW-IASCGHDRTVKLWGIE 521
Score = 46 (21.3 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 25 ERKRLAANKDVDDDQ---EKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKAR 76
E++ AA +D++ + E+ Y E DE+ K ++A+ + R KAR
Sbjct: 104 EKQEAAAAEDIEMAEAGGEEDEGEQQEEFYTEGSDELLKARKAIARFSLPRAKAR 158
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 393 (143.4 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 84/195 (43%), Positives = 124/195 (63%)
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHP--------SGRF-LGTCCWDHS 265
AS + G VK+W+ D + + GH RVS + ++P S + L T D++
Sbjct: 188 ASGSWGGQVKVWNSDNLSEVQLFRGHTD-RVSGLDWYPLCQAWDADSEQLTLATGAADNT 246
Query: 266 ---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W+ TPL LEGH RV R+ FHPSG +L + +D +WRLWD++ G E+L QEG
Sbjct: 247 VCLWKASQSTPLLRLEGHLA-RVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEG 305
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H + ++ ++ Q DGS+V++GG DA GR+WDLR+G+ IM L+ H++ + ++ +SP+GY LA
Sbjct: 306 HSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLA 365
Query: 381 TGSEDNAVKIWDLRK 395
T S D+ VKIWDLRK
Sbjct: 366 TSSADDTVKIWDLRK 380
Score = 156 (60.0 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 60/243 (24%), Positives = 102/243 (41%)
Query: 159 SFSPDSQHVATASWSG---LCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLA 215
++ DS+ + A+ + +C LW + + GH VG + FHP G L
Sbjct: 228 AWDADSEQLTLATGAADNTVC-LWKASQSTPLLRLEGHLARVGRVAFHP---SGDY--LV 281
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL---GTCCWDHSWRLDTPL 272
S + D + +LW + L EGH + I P G + G W L +
Sbjct: 282 SASFDTTWRLWDVHTGVELLMQEGHSE-GIFSIACQPDGSLVSSGGNDAIGRIWDLRSGK 340
Query: 273 ANLEGHEPFR-VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSF 330
+ + E R + + + P+G L T D + ++WDL + + H H V + +
Sbjct: 341 SIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRK-VSLAHTIPAHSSLVSDVRY 399
Query: 331 --QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
G +AT G D ++W+ I + GH + V SVD D + +++G D +
Sbjct: 400 IESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGYGDRF-ISSGY-DRTI 457
Query: 389 KIW 391
K+W
Sbjct: 458 KLW 460
Score = 130 (50.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 45/180 (25%), Positives = 75/180 (41%)
Query: 223 VKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFR 282
+ L+SL+K A L + +S I P G +H + + + + G P
Sbjct: 122 IALYSLEK----AKLRLKKEREISEIPV-PEIVLSGKSSIEHLQKAELMGSQIGGERPIA 176
Query: 283 VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH-----GKPVY--CMSFQGDGS 335
+ ++F +G + W ++W+ + EV GH G Y C ++ D
Sbjct: 177 I--VRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSE 234
Query: 336 --VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+ATG D +W ++ LEGHL V V F P G +L + S D ++WD+
Sbjct: 235 QLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDV 294
Score = 122 (48.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 52/208 (25%), Positives = 89/208 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE-CELVQTFRGHDCNVGAIEFHPLPSE 208
G + +F P ++ +AS+ +LW V EL+ GH + +I P +
Sbjct: 263 GHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQ-EGHSEGIFSIACQP---D 318
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
G++ S S D ++W L + L+ H ++ + + P+G L T D +
Sbjct: 319 GSLVS--SGGNDAIGRIWDLRSGKSIMVLDEHIR-QIVAMAWSPNGYQLATSSADDTVKI 375
Query: 266 WRL-DTPLAN-LEGHEPFRVSRIKFHPSG--RFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
W L LA+ + H VS +++ SG RF+ T +D +LW+ + GH
Sbjct: 376 WDLRKVSLAHTIPAHSSL-VSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGH 434
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVW 349
+ V MS G G + G D ++W
Sbjct: 435 EEKV--MSVDGYGDRFISSGYDRTIKLW 460
Score = 101 (40.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 40/167 (23%), Positives = 75/167 (44%)
Query: 148 QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPS 207
Q G + I + PD V++ + ++W + + + H + A+ + P
Sbjct: 303 QEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSP--- 359
Query: 208 EGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG--RFLGTCCWDHS 265
G LA+ + D +VK+W L K + + H VS +++ SG RF+ T +D
Sbjct: 360 NGY--QLATSSADDTVKIWDLRKVSLAHTIPAHSSL-VSDVRYIESGVNRFIATSGYDGC 416
Query: 266 WRLDTPL-----ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
+L PL ++ GHE +V + + RF+ + +D + +LW
Sbjct: 417 VKLWNPLNCSLIKSMVGHEE-KVMSVDGY-GDRFISSG-YDRTIKLW 460
Score = 73 (30.8 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 60 KDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEE 104
K++ A E + + + + + + +D++V+ LR+ GEPI FGE+
Sbjct: 26 KEQAAYYAEQKEKDRIKALKIPYEDSKVREYLRRYGEPITYFGED 70
>SGD|S000006382 [details] [associations]
symbol:PRP4 "Splicing factor" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 SGD:S000006382 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006949 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 EMBL:U25842 GO:GO:0046540
EMBL:M26597 HOGENOM:HOG000157615 KO:K12662
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:M28518 PIR:A32569
RefSeq:NP_015504.1 ProteinModelPortal:P20053 SMR:P20053
DIP:DIP-2607N IntAct:P20053 MINT:MINT-423902 STRING:P20053
PaxDb:P20053 EnsemblFungi:YPR178W GeneID:856307 KEGG:sce:YPR178W
CYGD:YPR178w OrthoDB:EOG4V1B90 NextBio:981676 Genevestigator:P20053
GermOnline:YPR178W Uniprot:P20053
Length = 465
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 62/125 (49%), Positives = 91/125 (72%)
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ 331
L +L GHE R+S +K+HPSG+F+G+ D +WRLWD + QE+L QEGH K V+ +SFQ
Sbjct: 258 LGDLVGHER-RISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQ 316
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
DGS+V +GG+D+ +WD+R+G +M L GH K +++V +SP+GY +ATG D + +W
Sbjct: 317 CDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVW 376
Query: 392 DLRKR 396
D+RKR
Sbjct: 377 DIRKR 381
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 93/277 (33%), Positives = 140/277 (50%)
Query: 130 ARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE-LVQ 188
+R ELQ+ + +L + SQ+ T+PIS S S D VAT SW+G ++ + L Q
Sbjct: 154 SRRTELQR-MANLELAGSQLVSTKPISAVSLSTDDMVVATGSWAGDLQVLNSQTLQPLTQ 212
Query: 189 TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP----LANLEGHEPFR 244
H +GAI++HP + + SCA+DG +K + + L +L GHE R
Sbjct: 213 KLDSHVGKIGAIDWHPDSNN----QMISCAEDGLIKNFQYSNEEGGLRLLGDLVGHER-R 267
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCC 299
+S +K+HPSG+F+G+ D +WRL D L EGH+ V + F G + +
Sbjct: 268 ISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDK-GVFSLSFQCDGSLVCSGG 326
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT---GRC 356
D LWD+ G +V+ GH KP+Y +++ +G VATGG D VWD+R G+
Sbjct: 327 MDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQL 386
Query: 357 IMFLEGHLKSVFSVDFSPD--GYHLATGSEDNAVKIW 391
L H V V FS + G L + DN + ++
Sbjct: 387 NQIL-AHRNIVTQVRFSKEDGGKKLVSCGYDNLINVY 422
Score = 118 (46.6 bits), Expect = 0.00063, P = 0.00063
Identities = 43/211 (20%), Positives = 87/211 (41%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG R IS + P + + +AS +LW + + GHD V ++ F +
Sbjct: 262 VGHERRISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQ---CD 318
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTC-------C 261
G++ + S D LW + + + L GH + + + P+G + T
Sbjct: 319 GSL--VCSGGMDSLSMLWDIRSGSKVMTLAGHSK-PIYTVAWSPNGYQVATGGGDGIINV 375
Query: 262 WDHSWRLDTPLANLEGHEPFRVSRIKF--HPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE 319
WD R + L + H V++++F G+ L +C +D+ ++ + ++
Sbjct: 376 WDIRKRDEGQLNQILAHRNI-VTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLA 434
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
GH + + + + +GG D ++W+
Sbjct: 435 GHTDKIISLDISNNSHFLVSGGWDRSIKLWN 465
>TAIR|locus:2063349 [details] [associations]
symbol:AT2G05720 "AT2G05720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 EMBL:AC007170 GO:GO:0030529 InterPro:IPR027106
PANTHER:PTHR19846 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000157615
IPI:IPI00531184 PIR:C84471 RefSeq:NP_178635.1 UniGene:At.52653
ProteinModelPortal:Q9SIB8 SMR:Q9SIB8 STRING:Q9SIB8
EnsemblPlants:AT2G05720.1 GeneID:815121 KEGG:ath:AT2G05720
TAIR:At2g05720 InParanoid:Q9SIB8 OMA:YIIPAHV PhylomeDB:Q9SIB8
ArrayExpress:Q9SIB8 Genevestigator:Q9SIB8 Uniprot:Q9SIB8
Length = 276
Score = 222 (83.2 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 39/62 (62%), Positives = 48/62 (77%)
Query: 338 ATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
A+ G D+ RVWDLRT R I+ +GH+K V SVDFSP+GYHLA+G EDN +IWDLR R+
Sbjct: 146 ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRK 205
Query: 398 LL 399
LL
Sbjct: 206 LL 207
Score = 144 (55.7 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 34/107 (31%), Positives = 55/107 (51%)
Query: 124 PEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE 183
P+ + A + KH + + S+ GD RP++ CS S D + + T S SG+ KLW VP+
Sbjct: 35 PDEDKNAETKLALKHCKDMVLGSSKFGDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQ 94
Query: 184 C-ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD 229
+ +GH +V + F + E C LA+ + D + K+W D
Sbjct: 95 VTNKIVVLKGHKEHVTDVVFSSVDDE---C-LATASTDRTEKIWKTD 137
Score = 83 (34.3 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 41/163 (25%), Positives = 66/163 (40%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA 273
LA+ + D + K+W D T L + F+ S F R WD R +
Sbjct: 122 LATASTDRTEKIWKTD-GTLL------QTFKASS-GFDSLARV-----WD--LRTARNIL 166
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG- 332
+GH +V + F P+G L + D+ R+WDL + + H V + ++
Sbjct: 167 IFQGHIK-QVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQ 225
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD 375
+ +AT D +W R + L GH V S+D + D
Sbjct: 226 ERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDIAVD 268
Score = 81 (33.6 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 33/126 (26%), Positives = 50/126 (39%)
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLA 273
AS D ++W L + +GH +V + F P+G L + D+ R+ D +
Sbjct: 146 ASSGFDSLARVWDLRTARNILIFQGHIK-QVLSVDFSPNGYHLASGGEDNQCRIWDLRMR 204
Query: 274 NLEGHEPFRV---SRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L P V S++K+ P R FL T D + +W V GH V +
Sbjct: 205 KLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLD 264
Query: 330 FQGDGS 335
D S
Sbjct: 265 IAVDSS 270
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 339 (124.4 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 92/294 (31%), Positives = 140/294 (47%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSPD +H+ + S KLW + EL Q+ H +V A+ F P + LAS +
Sbjct: 1009 AFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQ-----LASSS 1063
Query: 219 QDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN---- 274
D ++KLW LEGH V + F P G+ L + +D + +L PL
Sbjct: 1064 LDSTIKLWDSATGELQRTLEGHSQ-GVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQ 1122
Query: 275 -LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
L G + V + F P G+ L + +D + +LWD G+ + EGH + + F D
Sbjct: 1123 TLTGRSDW-VDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPD 1181
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G ++A+G D ++WD TG + EGH K V SV FSPDG LA+ S +K+WD
Sbjct: 1182 GKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDP 1241
Query: 394 RKRRLLKWCTQLLPN-SIGVTSLLTD----LYIDVLESL--NPGIGNIISSALK 440
LL+ P+ S G + D +D+ ++ +P G ++ ALK
Sbjct: 1242 VTGELLQTLND--PDESAGSVAFSPDGNRLASVDIFDTKIWDPATGELLQ-ALK 1292
Score = 327 (120.2 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 77/254 (30%), Positives = 127/254 (50%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + + +FSPD + +A+ S+ LW EL+QTF GH ++ ++ F P +G
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAP---DG 846
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
LAS + D ++K+W L L+ H V + F P G+ L + D + ++
Sbjct: 847 K--ELASASDDSTIKIWDLATGELQQTLDSHSQ-SVRSVAFSPDGKLLASSSLDSTIKVW 903
Query: 270 TPLA-----NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
P +LEG + V + F P G+ L + ++ +LW+ G+ + EGH +
Sbjct: 904 NPATGELQQSLEGRSGW-VKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQS 962
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
V ++F DG +A+ D ++W+ TG +GH + +V FSPDG HL +GS+
Sbjct: 963 VRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSD 1022
Query: 385 DNAVKIWDLRKRRL 398
DN +K+WDL L
Sbjct: 1023 DNTIKLWDLATSEL 1036
Score = 298 (110.0 bits), Expect = 7.3e-23, Sum P(2) = 7.3e-23
Identities = 77/239 (32%), Positives = 123/239 (51%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSPD + +A++S K+W EL Q+ G V ++ F P +G LAS +
Sbjct: 883 AFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSP---DGK--KLASGS 937
Query: 219 QDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLANLE- 276
+ +VKLW+ L LEGH V + F P G+ L + D + +L ++ L+
Sbjct: 938 EKNTVKLWNPATGELLQTLEGHSQ-SVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQ 996
Query: 277 ---GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
GH+ + + + F P G+ L + D++ +LWDL + E H + V+ ++F D
Sbjct: 997 TFKGHDLW-IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPD 1055
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
+A+ LD+ ++WD TG LEGH + V SV FSPDG LA+ S D +K+W+
Sbjct: 1056 DKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWN 1114
Score = 297 (109.6 bits), Expect = 9.7e-23, Sum P(2) = 9.7e-23
Identities = 82/254 (32%), Positives = 127/254 (50%)
Query: 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAV 211
+R + +FSPD + +A++S KLW EL +T GH V ++ F P +G +
Sbjct: 1044 SRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSP---DGKL 1100
Query: 212 CSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DT 270
LAS + DG++KLW+ L G + V + F P G+ L + +D + +L D+
Sbjct: 1101 --LASNSYDGTIKLWNPLTGELQQTLTGRSDW-VDSVAFSPDGKQLASGYYDSTIKLWDS 1157
Query: 271 P----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVY 326
L LEGH R+ + F P G+ L + +D + +LWD G+ + EGH K V
Sbjct: 1158 ATGELLQTLEGHSD-RIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVE 1216
Query: 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
++F DG ++A+ ++WD TG + L +S SV FSPDG LA+ +
Sbjct: 1217 SVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFD 1276
Query: 387 AVKIWDLRKRRLLK 400
KIWD LL+
Sbjct: 1277 T-KIWDPATGELLQ 1289
Score = 281 (104.0 bits), Expect = 9.2e-21, Sum P(2) = 9.2e-21
Identities = 89/288 (30%), Positives = 134/288 (46%)
Query: 131 RNQELQKHLTSLSIYC---SQVGDTRPIS-YCS---FSPDSQ------HVATASWSGLCK 177
++ EL K L + + +T P+ Y S FSP+ + + WS L K
Sbjct: 675 KDSELSKFLYDARRFVLNNRHLAETAPLQLYSSGLMFSPEGSITRRIFNYNLSGWSQLPK 734
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
+ E QT H V ++ F P +G L S + D +VK+W L L
Sbjct: 735 VEQTWSAEQ-QTLENHLGPVESVVFSP---DGK--QLVSGSYDDTVKIWDPATGELLQTL 788
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSG 292
+GH V + F P G+ L + +D++ W T L EGH P + + F P G
Sbjct: 789 DGHSG-TVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGH-PHSIWSVAFAPDG 846
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
+ L + D + ++WDL G+ + H + V ++F DG ++A+ LD+ +VW+
Sbjct: 847 KELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPA 906
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
TG LEG V SV FSPDG LA+GSE N VK+W+ LL+
Sbjct: 907 TGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQ 954
Score = 249 (92.7 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 69/226 (30%), Positives = 110/226 (48%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G ++ + +FSPD + +A+ S+ G KLW EL QT G V ++ F P +G
Sbjct: 1084 GHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSP---DG 1140
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
LAS D ++KLW L LEGH R+ + F P G+ L + +D + +L
Sbjct: 1141 K--QLASGYYDSTIKLWDSATGELLQTLEGHSD-RIQSVVFSPDGKLLASGSYDQTAKLW 1197
Query: 270 TP-----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
P L EGH + V + F P G+ L + + + +LWD G+ + +
Sbjct: 1198 DPATGELLQIFEGHSKW-VESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDES 1256
Query: 325 VYCMSFQGDGSVVATGGLDAFG-RVWDLRTGRCIMFLEGHLKSVFS 369
++F DG+ +A+ +D F ++WD TG + L+GH K V+S
Sbjct: 1257 AGSVAFSPDGNRLAS--VDIFDTKIWDPATGELLQALKGHSKWVWS 1300
Score = 165 (63.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 57/204 (27%), Positives = 93/204 (45%)
Query: 134 ELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGH 193
ELQ+ LT S + V +FSPD + +A+ + KLW EL+QT GH
Sbjct: 1119 ELQQTLTGRSDWVDSV---------AFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGH 1169
Query: 194 DCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPS 253
+ ++ F P +G + LAS + D + KLW L EGH + V + F P
Sbjct: 1170 SDRIQSVVFSP---DGKL--LASGSYDQTAKLWDPATGELLQIFEGHSKW-VESVAFSPD 1223
Query: 254 GRFLGTCCWDHSWRLDTPLAN--LEG-HEPFR-VSRIKFHPSGRFLGTC-CWDHSWRLWD 308
G+ L + + + +L P+ L+ ++P + F P G L + +D ++WD
Sbjct: 1224 GKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT--KIWD 1281
Query: 309 LNQGQEVLHQEGHGKPVYCMSFQG 332
G+ + +GH K V+ + G
Sbjct: 1282 PATGELLQALKGHSKWVWSRTGAG 1305
Score = 41 (19.5 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 40 EKYTNVHTSNVYM--EIDDEMA--KDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLG 95
+K TN Y+ EI M + +LQ +R K A +S D K+ L LG
Sbjct: 29 KKVTNAQKEINYLNEEITRLMRILESLNGMLQGPDREKLAALHKISDDVGTCKVVLENLG 88
Query: 96 EPI 98
+ +
Sbjct: 89 KKV 91
Score = 40 (19.1 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 19 GSLEEQERKRLAANKDVDDD 38
G L+ +R++LAA + DD
Sbjct: 57 GMLQGPDREKLAALHKISDD 76
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 333 (122.3 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 83/228 (36%), Positives = 123/228 (53%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+TF GH V F P S+ L SC++D + +LWS++ + L +GH F V
Sbjct: 673 KTFLGHSGPVYGCSFSP-DSQ----YLLSCSEDTTARLWSMETMSNLVCYKGHN-FPVWD 726
Query: 248 IKFHPSGRFLGTCCWDHSWRLDT-----PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 302
+ F P G + T D + RL T PL GH + ++FHP+ +L T D
Sbjct: 727 VSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLS-DCNTVRFHPNINYLATGSNDK 785
Query: 303 SWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
S RLW++ G+ V GH P+Y ++F DG ++AT G D +WDL TG+ + ++G
Sbjct: 786 SARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDG 845
Query: 363 HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
H K V+S+DFS DG LA+GS D V++WD++K TQ P+S+
Sbjct: 846 HTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSSLSTQ--PSSL 891
Score = 287 (106.1 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 72/229 (31%), Positives = 118/229 (51%)
Query: 129 TARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ 188
++ + +LQK S + + +G + P+ CSFSPDSQ++ + S +LW++ +
Sbjct: 657 SSSSNKLQKQQKE-SEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLV 715
Query: 189 TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRI 248
++GH+ V + F P G + AS D + +LW+ + +PL GH + +
Sbjct: 716 CYKGHNFPVWDVSFSPF---GFYFATAS--HDRTARLWTTNHISPLRIFTGHLS-DCNTV 769
Query: 249 KFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 303
+FHP+ +L T D S W + T + GH + + F P GR L T D S
Sbjct: 770 RFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRA-PIYTVAFSPDGRLLATAGEDTS 828
Query: 304 WRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
LWDL+ G++V +GH K VY + F DGS++A+G D R+WD++
Sbjct: 829 VILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVK 877
Score = 44 (20.5 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 13/60 (21%), Positives = 25/60 (41%)
Query: 36 DDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLG 95
DD+ T + +N+ D+ + D Q L Q + + S N ++ ++LG
Sbjct: 230 DDEATNTTTTNQTNINTVTDNLGSSDDQELAQYLHMYNSSNKGDTSNPQNYLE-QYKKLG 288
>CGD|CAL0004633 [details] [associations]
symbol:orf19.7343 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 291 (107.5 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 53/135 (39%), Positives = 84/135 (62%)
Query: 268 LDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ--GQE-----VLHQEG 320
L +P+ +++ R+++ FHP + + +D +W+LWDLN+ GQ ++ QEG
Sbjct: 209 LSSPIVSIKQAHNDRITKTLFHPINNLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEG 268
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H KP++ DG + +GGLD +WDLR+GR I+ L+ H+ V+ +D+SP+GY
Sbjct: 269 HSKPIFTGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFV 328
Query: 381 TGSEDNAVKIWDLRK 395
TGS D ++KIWDLRK
Sbjct: 329 TGSGDCSLKIWDLRK 343
Score = 105 (42.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 318 QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR--TGR-----CIMFLEGHLKSVFSV 370
++ H + F +++ + D ++WDL +G+ C++ EGH K +F+
Sbjct: 217 KQAHNDRITKTLFHPINNLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIFTG 276
Query: 371 DFSPDGYHLATGSEDNAVKIWDLRKRR 397
+ PDG +G D V IWDLR R
Sbjct: 277 EIHPDGGLFMSGGLDGIVHIWDLRSGR 303
Score = 83 (34.3 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 24/103 (23%), Positives = 51/103 (49%)
Query: 133 QELQKHLTSLSIYCSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ-T 189
++L +L+ IY SQ G TR IS S + +++A SW G L + + + T
Sbjct: 90 RQLNSNLSKYEIYGSQFIPGTTRTISNIKISNNDKYIACGSWDGSINLLNSQDLSIFKKT 149
Query: 190 FRG-HDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKD 231
G H+ + + ++ ++ L S +G++ +W+++++
Sbjct: 150 PSGFHNEKISGLSWNNNDNQ-----LVSGGNEGTINIWNVNEN 187
>UNIPROTKB|Q5A3W6 [details] [associations]
symbol:PRP4 "Potential spliceosomal U4/U6 snRNP protein
Prp4p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 291 (107.5 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 53/135 (39%), Positives = 84/135 (62%)
Query: 268 LDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ--GQE-----VLHQEG 320
L +P+ +++ R+++ FHP + + +D +W+LWDLN+ GQ ++ QEG
Sbjct: 209 LSSPIVSIKQAHNDRITKTLFHPINNLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEG 268
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H KP++ DG + +GGLD +WDLR+GR I+ L+ H+ V+ +D+SP+GY
Sbjct: 269 HSKPIFTGEIHPDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFV 328
Query: 381 TGSEDNAVKIWDLRK 395
TGS D ++KIWDLRK
Sbjct: 329 TGSGDCSLKIWDLRK 343
Score = 105 (42.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 318 QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR--TGR-----CIMFLEGHLKSVFSV 370
++ H + F +++ + D ++WDL +G+ C++ EGH K +F+
Sbjct: 217 KQAHNDRITKTLFHPINNLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIFTG 276
Query: 371 DFSPDGYHLATGSEDNAVKIWDLRKRR 397
+ PDG +G D V IWDLR R
Sbjct: 277 EIHPDGGLFMSGGLDGIVHIWDLRSGR 303
Score = 83 (34.3 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 24/103 (23%), Positives = 51/103 (49%)
Query: 133 QELQKHLTSLSIYCSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ-T 189
++L +L+ IY SQ G TR IS S + +++A SW G L + + + T
Sbjct: 90 RQLNSNLSKYEIYGSQFIPGTTRTISNIKISNNDKYIACGSWDGSINLLNSQDLSIFKKT 149
Query: 190 FRG-HDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKD 231
G H+ + + ++ ++ L S +G++ +W+++++
Sbjct: 150 PSGFHNEKISGLSWNNNDNQ-----LVSGGNEGTINIWNVNEN 187
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 103/382 (26%), Positives = 169/382 (44%)
Query: 38 DQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEP 97
+ EK+ + T ++ + +D + D AL++E + KA + ++ QVKL +++L E
Sbjct: 18 EYEKHGELKTKSIDL-LDLGPSTDVSALVEEIQ---KAEPLLTASRTEQVKLLIQRLQEK 73
Query: 98 ICLFGEEYSXXXXXXXXXXXXXHLHIPEATRTARNQELQKHLTSLSIYCSQVGDT----- 152
+ G+ + HI T A N+ +T ++ DT
Sbjct: 74 L---GQNSNHTFYLFKVLKA----HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEE 126
Query: 153 -------RPISYC-SFS-PDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203
R + Y +F+ P +AT S+ CKLW+V + TFRGH + + F+
Sbjct: 127 LNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFN 186
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
P + +A+ + D + KLW + + L GH +S + F+ SG + T +D
Sbjct: 187 PQST-----LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIIS-LSFNTSGDRIITGSFD 240
Query: 264 HS---WRLDTPL-AN-LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
H+ W DT N L GH +S F+ + T D + +LWD G+ V
Sbjct: 241 HTVVVWDADTGRKVNILIGHCA-EISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATL 299
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
GH + F G ++AT D R++ T +CI LEGH + + F+P G H
Sbjct: 300 TGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNH 359
Query: 379 LATGSEDNAVKIWDLRKRRLLK 400
L TGS D +IWD + + L+
Sbjct: 360 LLTGSSDKTARIWDAQTGQCLQ 381
Score = 266 (98.7 bits), Expect = 7.5e-21, P = 7.5e-21
Identities = 74/247 (29%), Positives = 116/247 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T I SF+P S VAT S KLW + E V T RGH + ++ F+ + G
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFN---TSG 231
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
+ + + D +V +W D + L GH +S F+ + T D + +L
Sbjct: 232 D--RIITGSFDHTVVVWDADTGRKVNILIGHCA-EISSASFNWDCSLILTGSMDKTCKLW 288
Query: 269 DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D +A L GH+ + F +G+ + T D + R++ + + EGH
Sbjct: 289 DATNGKCVATLTGHDD-EILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGE 347
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
+ +SF G+ + TG D R+WD +TG+C+ LEGH +FS F+ G + TGS+
Sbjct: 348 ISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSK 407
Query: 385 DNAVKIW 391
DN +IW
Sbjct: 408 DNTCRIW 414
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 316 (116.3 bits), Expect = 7.6e-27, Sum P(3) = 7.6e-27
Identities = 91/278 (32%), Positives = 137/278 (49%)
Query: 135 LQKHLTSLSIYCSQVGDTRPISYC-SFSPDSQHVATASWSGLCKLWTVPECELVQTFRG- 192
+Q L S+ +Y +T C F+ DS VA KLW++ L +
Sbjct: 445 IQASLPSVCMYTFH--NTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRD 502
Query: 193 -HDC--NVGAIEFHPLPSEGAVCS-----LASCAQDGSVKLWSLDKDTPLANLEGH-EPF 243
H N + H P G S L SC++D +V+LWSLD T L + +GH +P
Sbjct: 503 RHKPQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQP- 561
Query: 244 RVSRIKFHPSGRFLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTC 298
V +KF P G + T D + W D PL GH V ++FHP+ ++ T
Sbjct: 562 -VWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHIN-DVDCVEFHPNSNYVFTG 619
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
D + R+WD++ G V GH V C++ DG +A+GG D VWD+ +GR +
Sbjct: 620 SSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLK 679
Query: 359 FLEGHLK-SVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
+ GH + S++S+ FS DG L +G DN+V++WD++K
Sbjct: 680 SMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKK 717
Score = 248 (92.4 bits), Expect = 9.4e-18, Sum P(3) = 9.4e-18
Identities = 75/227 (33%), Positives = 107/227 (47%)
Query: 189 TFRGHDCNVGAIEFHP---LPSEGAVCSLASC-AQDGS-VK-LWSLDKDTPLAN---LEG 239
TF + N+ IEF+ L + G S + DG +K + D+ P N L G
Sbjct: 456 TFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIG 515
Query: 240 HEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT--PLANLEGH-EPFRVSRIKFHPSGR 293
H V + F P ++L +C D + W LDT L + +GH +P V +KF P G
Sbjct: 516 HSG-PVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQP--VWDVKFSPLGH 572
Query: 294 FLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT 353
+ T D + RLW + + GH V C+ F + + V TG D R+WD+ T
Sbjct: 573 YFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHT 632
Query: 354 GRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
G C+ GH SV + SPDG LA+G ED + +WD+ R LK
Sbjct: 633 GNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLK 679
Score = 42 (19.8 bits), Expect = 7.6e-27, Sum P(3) = 7.6e-27
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 60 KDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQL 94
+DKQ+ +++ R K R V +S + ++K L++L
Sbjct: 149 RDKQSKIEKELREAKDREVKISKE-KELK-QLKEL 181
Score = 39 (18.8 bits), Expect = 7.6e-27, Sum P(3) = 7.6e-27
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 25 ERKRLAANKDVDDDQ-EKYTN 44
E K+L NKD D Q ++ TN
Sbjct: 4 ESKQLQGNKDGDKHQTQESTN 24
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 291 (107.5 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 86/296 (29%), Positives = 137/296 (46%)
Query: 123 IPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTV- 181
+ E+ + LQ L S+ +Y Q + +S FS D + A K+W++
Sbjct: 438 VKESRDAIKLDNLQLALPSVCMYTFQ-NTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSLD 496
Query: 182 ------PECEL----------VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKL 225
P L +T GH V + F P + L S ++D +V+L
Sbjct: 497 GSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSP---DNKY--LLSGSEDKTVRL 551
Query: 226 WSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT--PLANLEGHEP 280
WS+D T L + +GH V + F P G + T D + W D PL GH
Sbjct: 552 WSMDTHTALVSYKGHN-HPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLN 610
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATG 340
V + FHP+G ++ T D + R+WD++ G V GH PV ++ DG ++TG
Sbjct: 611 -DVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTG 669
Query: 341 GLDAFGRVWDLRTGRCIMFLEGHLKS-VFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
D VWD+ TG+ + + GH K+ ++S+ +S +G L +G D+ V++WDL+K
Sbjct: 670 SEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKK 725
Score = 241 (89.9 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 69/215 (32%), Positives = 98/215 (45%)
Query: 194 DCNVGAIEFHPLPSEGAVCSL-ASCAQDGSVKLWSLDKDT-PLAN-LEGHEPFRVSRIKF 250
DC + A F S + SL S + ++ L + DKD P L GH V F
Sbjct: 477 DCRIAAAGFQD--SYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSG-TVYSTSF 533
Query: 251 HPSGRFLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR 305
P ++L + D + W +DT L + +GH V + F P G + T D + R
Sbjct: 534 SPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHN-HPVWDVSFSPLGHYFATASHDQTAR 592
Query: 306 LWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365
LW + + GH V C+SF +G V TG D R+WD+ TG + GH
Sbjct: 593 LWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTA 652
Query: 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
V S+ PDG L+TGSED + +WD+ + LK
Sbjct: 653 PVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLK 687
Score = 111 (44.1 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 30/95 (31%), Positives = 46/95 (48%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
+G T P+ + PD + ++T S G+ +W + + ++ RGH N AI E
Sbjct: 648 LGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKN--AIYSLSYSKE 705
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPF 243
G V L S D +V++W L K T + E EPF
Sbjct: 706 GNV--LISGGADHTVRVWDLKKATTEPSAEPDEPF 738
Score = 64 (27.6 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 22 EEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVS 81
+E+ K + + DDQEK N T+ D+ + + LLQE++ + + +
Sbjct: 325 DEEFVKEIETELKIKDDQEKQLNQQTAG-----DNYSGANNRTLLQEYKAMNNEKFKDNT 379
Query: 82 TDDNQVKL 89
DD++ K+
Sbjct: 380 GDDDKDKI 387
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 294 (108.6 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 72/245 (29%), Positives = 113/245 (46%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
+P +AT S+ CKLW+V + TFRGH + + F+P + +A+ + D
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST-----LVATGSMD 198
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT--PLANL 275
+ KLW + + L GH +S + F+ SG + T +DH+ W DT + L
Sbjct: 199 TTAKLWDIQSGEEVFTLTGHSAEIIS-LSFNTSGNRIITGSFDHTVTVWEADTGRKVYTL 257
Query: 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS 335
GH +S F+ + T D + +LWD G+ V GH + F G
Sbjct: 258 IGHCA-EISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGK 316
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
++AT D R++ T C+ LEGH + + F+P G L TGS D +IWD +
Sbjct: 317 LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQT 376
Query: 396 RRLLK 400
+ L+
Sbjct: 377 GQCLQ 381
Score = 261 (96.9 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 74/247 (29%), Positives = 115/247 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T I SF+P S VAT S KLW + E V T GH + ++ F+ + G
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFN---TSG 231
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
+ + + D +V +W D + L GH +S F+ + T D + +L
Sbjct: 232 N--RIITGSFDHTVTVWEADTGRKVYTLIGHCA-EISSAVFNWDCSLILTGSMDKTCKLW 288
Query: 269 DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D +A L GH+ + F +G+ + T D + R++ + V EGH
Sbjct: 289 DAVNGKCVATLTGHDD-EILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGE 347
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
+ +SF G+ + TG D R+WD +TG+C+ LEGH +FS F+ G + TGS+
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSK 407
Query: 385 DNAVKIW 391
DN +IW
Sbjct: 408 DNTCRIW 414
Score = 234 (87.4 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 64/248 (25%), Positives = 109/248 (43%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P++ + + T S+ CKLW E + T GH V AI F+ +
Sbjct: 94 PLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGD----K 149
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT 270
+A+ + D + KLWS++ GH + + F+P + T D + W + +
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTA-EIVCLSFNPQSTLVATGSMDTTAKLWDIQS 208
Query: 271 --PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+ L GH +S + F+ SG + T +DH+ +W+ + G++V GH +
Sbjct: 209 GEEVFTLTGHSAEIIS-LSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSA 267
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F D S++ TG +D ++WD G+C+ L GH + F G +AT S D
Sbjct: 268 VFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTA 327
Query: 389 KIWDLRKR 396
+I+ R
Sbjct: 328 RIFSAATR 335
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 62/201 (30%), Positives = 90/201 (44%)
Query: 203 HPLP-SEGAVCSLASC----AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH-PSGRF 256
H LP + A+ SC + D + KLW L LEGH V I F+ P G
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNV-VYAIAFNNPYGDK 149
Query: 257 LGTCCWDHS---WRLDTPLA--NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ 311
+ T +D + W ++T GH + + F+P + T D + +LWD+
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTA-EIVCLSFNPQSTLVATGSMDTTAKLWDIQS 208
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
G+EV GH + +SF G+ + TG D VW+ TGR + L GH + S
Sbjct: 209 GEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAV 268
Query: 372 FSPDGYHLATGSEDNAVKIWD 392
F+ D + TGS D K+WD
Sbjct: 269 FNWDCSLILTGSMDKTCKLWD 289
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/173 (29%), Positives = 75/173 (43%)
Query: 140 TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGA 199
T +Y + +G IS F+ D + T S CKLW + V T GHD +
Sbjct: 250 TGRKVY-TLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILD 308
Query: 200 IEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGT 259
F G + + AS DG+ +++S + LEGHE +S+I F+P G L T
Sbjct: 309 SCFD---YTGKLIATASA--DGTARIFSAATRECVTKLEGHEG-EISKISFNPQGNRLLT 362
Query: 260 CCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
D + W T L LEGH + F+ G + T D++ R+W
Sbjct: 363 GSSDKTARIWDAQTGQCLQVLEGHTD-EIFSCAFNYKGDIIITGSKDNTCRIW 414
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 295 (108.9 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 78/239 (32%), Positives = 123/239 (51%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
I +FSPD + +A+ S KLW L QT GH +V ++ F P G + L
Sbjct: 44 IETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP---NGQL--L 98
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN 274
AS + D ++KLW+ D+ +EGH RV + F P+G+ W+ + + +
Sbjct: 99 ASGSSDTTIKLWNSASDSLKHTMEGHSD-RVESVAFSPNGQL-----WNPA--IGSLKHT 150
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGD 333
+EGH + +S + F P G+ L + + + +LWD + + H GH V + F D
Sbjct: 151 IEGHSDWVLS-VAFSPDGQLLASGSAEKTIKLWD-SATCGLKHTLGGHSNWVLPLVFSPD 208
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
G ++A+G DA ++WD +G LEGH + S+ FSP+G LA+GS D +K+WD
Sbjct: 209 GRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWD 267
Score = 262 (97.3 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 77/248 (31%), Positives = 117/248 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + + +FSP+ Q +A+ S KLW L T GH V ++ F P G
Sbjct: 81 GHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSP---NG 137
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
+ + A GS+K +EGH + +S + F P G+ L + + + +L
Sbjct: 138 QLWNPAI----GSLK----------HTIEGHSDWVLS-VAFSPDGQLLASGSAEKTIKLW 182
Query: 269 DTPLANLE----GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D+ L+ GH + V + F P GR L + D + +LWD G EGH
Sbjct: 183 DSATCGLKHTLGGHSNW-VLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNK 241
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
+ ++F +G ++A+G DA ++WD TG L+GH V SV FSPD L +GS
Sbjct: 242 IESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSG 301
Query: 385 DNAVKIWD 392
DN +K+WD
Sbjct: 302 DNTIKLWD 309
Score = 170 (64.9 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 64/236 (27%), Positives = 107/236 (45%)
Query: 164 SQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223
S V + ++S +LW L T GH V ++ F P +G + LAS + + ++
Sbjct: 125 SDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSP---DGQL--LASGSAEKTI 179
Query: 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL----EGH 278
KLW L GH + V + F P GR L + D + +L D P +L EGH
Sbjct: 180 KLWDSATCGLKHTLGGHSNW-VLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGH 238
Query: 279 EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVA 338
++ + F P+G+ L + D + +LWD G +GH V + F D ++
Sbjct: 239 SN-KIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLE 297
Query: 339 TGGLDAFGRVWDLRTGRCIMFLEGHLKS---VFSVDFSPDGYHLATGSEDNAVKIW 391
+G D ++WD TG L+ +++ V S++FS + L T +++ W
Sbjct: 298 SGSGDNTIKLWDPATG----ILKHSMRTPGIVRSIEFSIELPQLITNLGTFSIQAW 349
Score = 164 (62.8 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 34/83 (40%), Positives = 49/83 (59%)
Query: 310 NQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFS 369
N G E+ EGH + ++F DG ++A+G D ++WD +G LEGH SV S
Sbjct: 29 NWGPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQS 88
Query: 370 VDFSPDGYHLATGSEDNAVKIWD 392
V FSP+G LA+GS D +K+W+
Sbjct: 89 VAFSPNGQLLASGSSDTTIKLWN 111
Score = 152 (58.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ 331
L LEGH + + + F P GR L + D + +LWD G EGH V ++F
Sbjct: 34 LQTLEGHSDW-IETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFS 92
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG--YHLATGSEDNAVK 389
+G ++A+G D ++W+ + +EGH V SV FSP+G ++ A GS + ++
Sbjct: 93 PNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIE 152
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 300 (110.7 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 87/289 (30%), Positives = 136/289 (47%)
Query: 158 CS-FSPDSQHVATASWSGLCKLWTVP--ECELVQTFRGHDCNVGAIEF--HPLPSEGAVC 212
C+ FSPDS +A +LW++ + L ++ D + G++ H P G
Sbjct: 329 CAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSD-GSVRLLSHSGPVYGTTF 387
Query: 213 S-----LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-- 265
S L SC++D S +LWS+D T L +GH V + F P G + T D +
Sbjct: 388 SPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTG-PVWDVAFGPFGHYFATASHDQTAQ 446
Query: 266 -WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322
W D PL GH V + FHP+ ++ T D + RLWD+++G V GH
Sbjct: 447 LWSCDHIYPLRVFAGHLS-DVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHT 505
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
+PV ++ DG +A+ + +WD+ TGR I + GH +++S+ FS + L +G
Sbjct: 506 QPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSG 565
Query: 383 SEDNAVKIWDLRKRRLLKWCTQLLPNSIGVT--SLLTDLYIDVLESLNP 429
D V+ WD+ K + L S+ VT S T + +V S +P
Sbjct: 566 GSDCTVRAWDVFKTNYNNPVSSSLTGSV-VTPFSAKTSTFNEVNWSTSP 613
Score = 208 (78.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 57/204 (27%), Positives = 95/204 (46%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P+ +FSPD++++ + S +LW+V + ++GH V + F P G +
Sbjct: 381 PVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPF---GHYFA 437
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPL 272
AS D + +LWS D PL GH V + FHP+ ++ T D + RL D
Sbjct: 438 TAS--HDQTAQLWSCDHIYPLRVFAGHLS-DVDCVTFHPNSAYVLTGSSDKTCRLWDVHR 494
Query: 273 AN----LEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GH +P V+ + P G + + + LWD+ G+ + GH +Y
Sbjct: 495 GHSVRVFNGHTQP--VTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYS 552
Query: 328 MSFQGDGSVVATGGLDAFGRVWDL 351
+SF + +V+ +GG D R WD+
Sbjct: 553 LSFSRESTVLVSGGSDCTVRAWDV 576
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 41/175 (23%), Positives = 73/175 (41%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T P+ +F P + ATAS +LW+ ++ F GH +V + FHP +
Sbjct: 419 GHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHP--NSA 476
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWD---HS 265
V + +S D + +LW + + + GH +P V+ + P G + + + H
Sbjct: 477 YVLTGSS---DKTCRLWDVHRGHSVRVFNGHTQP--VTAVAIAPDGHTMASADSEGLIHL 531
Query: 266 WRLDTP--LANLEGHEPFRVSRIKFHPSGRFL---GTCCWDHSWRLWDLNQGQEV 315
W + T + + GH + + F L G+ C +W ++ N V
Sbjct: 532 WDIGTGRRIKTMRGHRG-NIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPV 585
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 296 (109.3 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 71/210 (33%), Positives = 103/210 (49%)
Query: 192 GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
GH V + F LP A L SC++D S++ W L+ T +GH + V +
Sbjct: 337 GHCGPVYSTRF--LPDSSA---LLSCSEDTSIRYWDLESFTNTVLYQGHA-YPVWDLDIS 390
Query: 252 PSGRFLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 306
P F + +DH+ W D PL GH V +KFHP+ +L T D + RL
Sbjct: 391 PHSLFFASASYDHTARLWSFDRTYPLRIYAGHLA-GVDCVKFHPNSNYLATGSTDKTVRL 449
Query: 307 WDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKS 366
W QG V GH PV C++F +G + + G D ++WDL +G L GH
Sbjct: 450 WSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDD 509
Query: 367 VFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
+ SV FS D +A+ S DN+V+IWD++ +
Sbjct: 510 ITSVTFSLDSSVIASASMDNSVRIWDIKSK 539
Score = 207 (77.9 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 75/285 (26%), Positives = 116/285 (40%)
Query: 120 HLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLW 179
H+H+ T E + T + G P+ F PDS + + S + W
Sbjct: 312 HIHL--INDTLEVDEEDRTATERKVLLGHCG---PVYSTRFLPDSSALLSCSEDTSIRYW 366
Query: 180 TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEG 239
+ ++GH V ++ P AS + D + +LWS D+ PL G
Sbjct: 367 DLESFTNTVLYQGHAYPVWDLDISPHS-----LFFASASYDHTARLWSFDRTYPLRIYAG 421
Query: 240 HEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLAN----LEGH-EPFRVSRIKFHPSGR 293
H V +KFHP+ +L T D + RL N GH P R + F P+G+
Sbjct: 422 HLA-GVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRC--LAFSPNGQ 478
Query: 294 FLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT 353
+L + D +LWDL G GH + ++F D SV+A+ +D R+WD+++
Sbjct: 479 YLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS 538
Query: 354 --------GRCIMFL---EGHLKSVFSVDFSPDGYHLATG-SEDN 386
G L G + +V +V F L TG E+N
Sbjct: 539 KHNSTPADGSSSELLGVYTGQMSTVLNVQFMAGSRLLVTGIREEN 583
Score = 198 (74.8 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 53/183 (28%), Positives = 83/183 (45%)
Query: 249 KFHPSGRFLGTCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 303
+F P L +C D S W L+ T +GH + V + P F + +DH+
Sbjct: 346 RFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHA-YPVWDLDISPHSLFFASASYDHT 404
Query: 304 WRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH 363
RLW ++ + GH V C+ F + + +ATG D R+W + G + GH
Sbjct: 405 ARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGH 464
Query: 364 LKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDV 423
V + FSP+G +L + ED +K+WDL L K L ++ +TS+ L V
Sbjct: 465 CGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYK---DLHGHTDDITSVTFSLDSSV 521
Query: 424 LES 426
+ S
Sbjct: 522 IAS 524
Score = 165 (63.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 56/183 (30%), Positives = 76/183 (41%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA 273
LA+ + S+KLWSL T + H+ VS I H L D R T
Sbjct: 283 LATGLNNSSIKLWSL---TSKFKSKPHQ-IDVSHI--HLINDTLEV---DEEDRTATERK 333
Query: 274 NLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
L GH P V +F P L +C D S R WDL + +GH PV+ +
Sbjct: 334 VLLGHCGP--VYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISP 391
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
A+ D R+W + GHL V V F P+ +LATGS D V++W
Sbjct: 392 HSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWS 451
Query: 393 LRK 395
++
Sbjct: 452 AQQ 454
Score = 41 (19.5 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 142 LSIYCSQVGDTRPI-SYCSFSPDSQHVATASWSGLCKLWTV 181
++IY +T + + SPD++ +AT + KLW++
Sbjct: 257 ITIYSYAFYNTEQLLNTAEASPDNKLLATGLNNSSIKLWSL 297
Score = 38 (18.4 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 43 TNVHTSNVYMEIDDE--MAKDKQALL 66
+++H N +E+D+E A +++ LL
Sbjct: 311 SHIHLINDTLEVDEEDRTATERKVLL 336
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 286 (105.7 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 73/245 (29%), Positives = 112/245 (45%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
+P +AT S+ CKLW+ + TFRGH + + F+P + V +A+ + D
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNP---QSTV--VATGSMD 198
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT--PLANL 275
+ KLW + + L GH +S + F SG + T +DH+ W T + L
Sbjct: 199 TTAKLWDIQSGEEVVTLTGHLAEIIS-LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTL 257
Query: 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS 335
GH +S F + T D + LWD G+ V GH + F G
Sbjct: 258 IGHCA-EISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK 316
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
++AT D RV++ T +CI LEGH + + F+P G L TGS D +IWD++
Sbjct: 317 LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQT 376
Query: 396 RRLLK 400
+ L+
Sbjct: 377 GQCLQ 381
Score = 251 (93.4 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 73/249 (29%), Positives = 115/249 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T I SF+P S VAT S KLW + E V T GH + ++ F + G
Sbjct: 175 GHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFD---TSG 231
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH------PSGRFLGTCC-W 262
+ + + D +V +W + L GH +S F +G TC W
Sbjct: 232 D--RIITGSFDHTVVVWDASTGRKVHTLIGHCA-EISSALFSWDCSLILTGSMDKTCMLW 288
Query: 263 DHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322
D + +A L GH+ + F +G+ + T D + R+++ + + EGH
Sbjct: 289 DAT--SGKCVATLTGHDD-EILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHE 345
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
+ +SF G+ + TG D R+WD++TG+C+ LEGH +FS F+ G + TG
Sbjct: 346 GEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITG 405
Query: 383 SEDNAVKIW 391
S+DN+ +IW
Sbjct: 406 SKDNSCRIW 414
Score = 225 (84.3 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 63/251 (25%), Positives = 110/251 (43%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P++ + + T S+ CK+W E + T GH V AI F+ +
Sbjct: 94 PLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGD----K 149
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT 270
+A+ + D + KLWS + GH + + F+P + T D + W + +
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTA-EIVCLSFNPQSTVVATGSMDTTAKLWDIQS 208
Query: 271 --PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+ L GH +S + F SG + T +DH+ +WD + G++V GH +
Sbjct: 209 GEEVVTLTGHLAEIIS-LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSA 267
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F D S++ TG +D +WD +G+C+ L GH + F G +AT S D
Sbjct: 268 LFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTA 327
Query: 389 KIWDLRKRRLL 399
++++ R+ +
Sbjct: 328 RVYNATTRKCI 338
Score = 213 (80.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 52/159 (32%), Positives = 80/159 (50%)
Query: 253 SGRFLGTC-CWDHSWRLDTPLANLEGHEPFRVSRIKFH-PSGRFLGTCCWDHSWRLWDLN 310
+G + TC WD + L LEGH V I F+ P G + T +D + +LW
Sbjct: 109 TGSYDRTCKVWDTA--SGEELHTLEGHRNV-VYAIAFNNPYGDKIATGSFDKTCKLWSAE 165
Query: 311 QGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV 370
G+ GH + C+SF +VVATG +D ++WD+++G ++ L GHL + S+
Sbjct: 166 TGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISL 225
Query: 371 DFSPDGYHLATGSEDNAVKIWDL---RK-RRLLKWCTQL 405
F G + TGS D+ V +WD RK L+ C ++
Sbjct: 226 SFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEI 264
Score = 211 (79.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 62/201 (30%), Positives = 87/201 (43%)
Query: 203 HPLPSEGAVCSLA-SC----AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH-PSGRF 256
H LP + A SC + D + K+W L LEGH V I F+ P G
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNV-VYAIAFNNPYGDK 149
Query: 257 LGTCCWDHS---WRLDTPLA--NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ 311
+ T +D + W +T GH + + F+P + T D + +LWD+
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTA-EIVCLSFNPQSTVVATGSMDTTAKLWDIQS 208
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
G+EV+ GH + +SF G + TG D VWD TGR + L GH + S
Sbjct: 209 GEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSAL 268
Query: 372 FSPDGYHLATGSEDNAVKIWD 392
FS D + TGS D +WD
Sbjct: 269 FSWDCSLILTGSMDKTCMLWD 289
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/164 (29%), Positives = 71/164 (43%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
+G IS FS D + T S C LW + V T GHD + F
Sbjct: 258 IGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFD---YT 314
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
G + + AS DG+ ++++ + LEGHE +S+I F+P G L T D +
Sbjct: 315 GKLIATASA--DGTARVYNATTRKCITKLEGHEG-EISKISFNPQGNRLLTGSSDKTARI 371
Query: 266 WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
W + T L LEGH + F+ G + T D+S R+W
Sbjct: 372 WDVQTGQCLQVLEGHTD-EIFSCAFNYKGNIVITGSKDNSCRIW 414
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 284 (105.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 79/256 (30%), Positives = 123/256 (48%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ FSP+ + +ATASW LW++ + GH V +++F P +G
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSP---QG 72
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LAS ++D +V+LW LD+ + + H V + F G+FL T D S W
Sbjct: 73 NL--LASASRDKTVRLWVLDRKGKSSEFKAHTA-PVRSVDFSADGQFLVTASEDKSIKVW 129
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGK 323
+ L +L H + V KF P GR + +C D + ++WD Q V + + G
Sbjct: 130 SMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGF 188
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
+ + F +G+ +A+ G D R+WD+R R + + H V + F P G L T S
Sbjct: 189 ANF-VDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTAS 247
Query: 384 EDNAVKIWDLRKRRLL 399
D VKI DL + RL+
Sbjct: 248 SDGTVKILDLVEGRLI 263
Score = 279 (103.3 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 72/248 (29%), Positives = 119/248 (47%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG ++ FSP +A+AS +LW + F+ H V +++F ++
Sbjct: 57 VGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFS---AD 113
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G L + ++D S+K+WS+ + L +L H + V KF P GR + +C D + ++
Sbjct: 114 GQF--LVTASEDKSIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 269 -DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
DT + N F + + F P+G + + DH+ R+WD+ + + H + H
Sbjct: 171 WDTTSKQCVNNFSDSVGF-ANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSC 229
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V C+SF G+ + T D ++ DL GR I L+GH VF+V FS DG +G
Sbjct: 230 GVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGG 289
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 290 ADAQVLVW 297
Score = 227 (85.0 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 182 PECELVQT-FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
PE +++ F+GH + + +F P + +A+ + D + LWSL GH
Sbjct: 5 PEDPILERYFKGHKAAITSADFSPNCKQ-----IATASWDTFLMLWSLKPHARAYRYVGH 59
Query: 241 EPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFL 295
+ V+ ++F P G L + D + W LD + + H V + F G+FL
Sbjct: 60 KDV-VTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTA-PVRSVDFSADGQFL 117
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D S ++W + + + + H V C F DG ++ + D ++WD + +
Sbjct: 118 VTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQ 177
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
C+ + VDFSP+G +A+ D+AV+IWD+R RLL+
Sbjct: 178 CVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQ 222
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 279 (103.3 bits), Expect = 4.6e-22, P = 4.6e-22
Identities = 73/248 (29%), Positives = 122/248 (49%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG ++ FSP +A+AS +LW + F+ H V +++F ++
Sbjct: 57 VGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFS---AD 113
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G + L + ++D S+K+WS+ + L +L H + V KF P GR + +C D + ++
Sbjct: 114 GQL--LVTASEDKSIKVWSMFRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 269 -DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
DT + N F + + F+P+G + + DH+ ++WD+ + + H + H
Sbjct: 171 WDTTNKQCVNNFSDSVGF-ANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSC 229
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V C+SF G+ + T D ++ DL GR I L+GH VF+V FS DG L +G
Sbjct: 230 GVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGG 289
Query: 384 EDNAVKIW 391
D V IW
Sbjct: 290 ADAQVLIW 297
Score = 265 (98.3 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 75/256 (29%), Positives = 122/256 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ FSP+ + +ATASW LW++ + GH V +++F P +G
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSP---QG 72
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LAS ++D +V+LW LD+ + + H V + F G+ L T D S W
Sbjct: 73 NL--LASASRDRTVRLWVLDRKGKSSEFKAHTA-PVRSVDFSADGQLLVTASEDKSIKVW 129
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGK 323
+ L +L H + V KF P GR + +C D + ++WD Q V + + G
Sbjct: 130 SMFRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
+ + F +G+ +A+ G D ++WD+R + + + H V + F P G L T S
Sbjct: 189 ANF-VDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTAS 247
Query: 384 EDNAVKIWDLRKRRLL 399
D VK+ DL + RL+
Sbjct: 248 SDGTVKMLDLIEGRLI 263
Score = 218 (81.8 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 58/220 (26%), Positives = 101/220 (45%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L ++F+GH + + +F P + +A+ + D + LWSL GH+ V
Sbjct: 10 LERSFKGHKAAITSADFSPNCKQ-----IATASWDTFLMLWSLKPHARAYRYVGHKDV-V 63
Query: 246 SRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCW 300
+ ++F P G L + D + W LD + + H V + F G+ L T
Sbjct: 64 TSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTA-PVRSVDFSADGQLLVTASE 122
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D S ++W + + + + H V C F DG ++ + D ++WD +C+
Sbjct: 123 DKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ VDF+P+G +A+ D+AVKIWD+R +LL+
Sbjct: 183 SDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQ 222
Score = 193 (73.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 59/209 (28%), Positives = 94/209 (44%)
Query: 236 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLANLE---GHEPFRVSRIKFH 289
+ +GH+ ++ F P+ + + T WD W L P A GH+ V+ ++F
Sbjct: 13 SFKGHKA-AITSADFSPNCKQIATASWDTFLMLWSLK-PHARAYRYVGHKDV-VTSLQFS 69
Query: 290 PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
P G L + D + RLW L++ + + H PV + F DG ++ T D +VW
Sbjct: 70 PQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVW 129
Query: 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNS 409
+ R + L H V FSPDG + + SED +KIWD ++ C +S
Sbjct: 130 SMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ----CVNNFSDS 185
Query: 410 IGVTSLLTDLYIDVLESLNPGIGNIISSA 438
+G + ++D NP G I+SA
Sbjct: 186 VGFAN-----FVD----FNPN-GTCIASA 204
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 260 (96.6 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 77/281 (27%), Positives = 133/281 (47%)
Query: 131 RNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTF 190
R +E QK +L + + G + IS FSP+ + +A+++ L +W + +T
Sbjct: 20 REEEPQKPNYALRL--TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTL 77
Query: 191 RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKF 250
GH + + + S+ + L S + D ++K+W + L L+GH F V F
Sbjct: 78 YGHSLEISDVAWS---SDSS--RLVSASDDKTLKVWDMRSGKCLKTLKGHSDF-VFCCDF 131
Query: 251 HPSGRFLGTCCWDHS---WRLDTP--LANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSW 304
+P + + +D S W + T L L H +P +S + F+ +G + + +D
Sbjct: 132 NPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDP--ISAVNFNCNGSLIVSGSYDGLC 189
Query: 305 RLWDLNQGQ--EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
R+WD GQ L EG+ PV + F +G + T LD ++WD GRC+ G
Sbjct: 190 RIWDAASGQCLRTLADEGN-PPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG 248
Query: 363 HLKSVFSV--DFSPDGYH-LATGSEDNAVKIWDLRKRRLLK 400
H + + FS G + +GSEDN V IW+L+ + +++
Sbjct: 249 HKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQ 289
Score = 252 (93.8 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 77/256 (30%), Positives = 126/256 (49%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + IS ++S DS + +AS K+W + + ++T +GH V +F+P PS
Sbjct: 79 GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP-PSN- 136
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFH------PSGRFLGTC-C 261
+ S + D SVK+W + L L H +P +S + F+ SG + G C
Sbjct: 137 ---LIVSGSFDESVKIWEVKTGKCLKTLSAHSDP--ISAVNFNCNGSLIVSGSYDGLCRI 191
Query: 262 WDH-SWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
WD S + LA+ EG+ P VS +KF P+G+++ T D++ +LWD ++G+ + G
Sbjct: 192 WDAASGQCLRTLAD-EGNPP--VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG 248
Query: 321 HGKPVYCM--SFQGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY 377
H YC+ SF G V +G D +W+L+T + L+GH V S P
Sbjct: 249 HKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKN 308
Query: 378 HLATGS--EDNAVKIW 391
+A+ + D +K+W
Sbjct: 309 IIASAALENDKTIKVW 324
Score = 237 (88.5 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 65/229 (28%), Positives = 106/229 (46%)
Query: 182 PECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
P L T GH + +++F P G LAS A D + +W L GH
Sbjct: 27 PNYALRLTLAGHSAAISSVKFSP---NGEW--LASSAADALIIIWGAYDGNCKKTLYGHS 81
Query: 242 PFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPSGRFLG 296
+S + + L + D + W R L L+GH F V F+P +
Sbjct: 82 -LEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDF-VFCCDFNPPSNLIV 139
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ +D S ++W++ G+ + H P+ ++F +GS++ +G D R+WD +G+C
Sbjct: 140 SGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQC 199
Query: 357 IMFL--EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
+ L EG+ F V FSP+G ++ T + DN +K+WD + R LK T
Sbjct: 200 LRTLADEGNPPVSF-VKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT 247
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 283 (104.7 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 66/187 (35%), Positives = 100/187 (53%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD- 269
L SC++DG+V+LWSL T L +GH + V +F P G + + D W D
Sbjct: 538 LLSCSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYFVSGGHDRVARLWATDH 596
Query: 270 -TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
PL GH V+ +FHP+ ++ T D + RLWD+ G V GH P++ +
Sbjct: 597 YQPLRIFAGHLA-DVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 655
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+F +G +ATG D +WD+ G + L+GH +++++ FS DG LA+GS DN V
Sbjct: 656 AFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTV 715
Query: 389 KIWDLRK 395
++WD K
Sbjct: 716 RLWDAVK 722
Score = 243 (90.6 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 63/206 (30%), Positives = 97/206 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + P+ SFSPD ++ + S G +LW++ + ++GH+ V +F P G
Sbjct: 521 GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY---G 577
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
S D +LW+ D PL GH V+ +FHP+ ++ T D + RL
Sbjct: 578 YY--FVSGGHDRVARLWATDHYQPLRIFAGHLA-DVTCTRFHPNSNYIATGSADRTVRLW 634
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D N GH+ + + F P+GRFL T D LWD+ G V +GH
Sbjct: 635 DVLNGNCVRIFTGHKG-PIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT 693
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWD 350
+Y + F DG ++A+G +D R+WD
Sbjct: 694 IYALRFSRDGEILASGSMDNTVRLWD 719
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 38/119 (31%), Positives = 55/119 (46%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V F P +L +C D + RLW L ++ +GH PV+ F G
Sbjct: 519 LYGHSG-PVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG 577
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+GG D R+W + + GHL V F P+ ++ATGS D V++WD+
Sbjct: 578 YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDV 636
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/175 (25%), Positives = 75/175 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ FSP + + + +LW + ++ F GH +V FHP +
Sbjct: 563 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNY- 621
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+A+ + D +V+LW + + GH+ + + F P+GRFL T D W
Sbjct: 622 ----IATGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLAFSPNGRFLATGATDGRVLLW 676
Query: 267 RLDTPL--ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE 319
+ L L+GH + ++F G L + D++ RLWD + E L +
Sbjct: 677 DIGHGLMVGELKGHTD-TIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETD 730
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 39/140 (27%), Positives = 63/140 (45%)
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+ D E+ GH PVY SF D + + + D R+W L+T C++ +GH
Sbjct: 506 RIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHN 565
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK---------WCTQLLPNSIGVTSL 415
V+ FSP GY+ +G D ++W + L+ CT+ PNS + +
Sbjct: 566 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATG 625
Query: 416 LTDLYIDVLESLNPGIGNII 435
D + + + LN GN +
Sbjct: 626 SADRTVRLWDVLN---GNCV 642
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 277 (102.6 bits), Expect = 8.2e-22, P = 8.2e-22
Identities = 78/257 (30%), Positives = 123/257 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTV-PECELVQTFRGHDCNVGAIEFHPLPSE 208
G I+ FSP + +ATASW LW P+ + + GH V +++F PL
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFR-YVGHKDVVTSVQFSPL--- 71
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
G + LAS ++D +V+LW DK + + H V + F G+FL T D S
Sbjct: 72 GNL--LASASRDRTVRLWIPDKRGKSSEFKAHTA-PVRSVDFSADGQFLATASEDKSIKV 128
Query: 266 WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHG 322
W + L +L H + V KF P GR + +C D + ++WD Q V + + G
Sbjct: 129 WNMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
+ + F +G+ +A+ G D ++WD+R + + + H V V F P G ++ T
Sbjct: 188 FANF-VDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITA 246
Query: 383 SEDNAVKIWDLRKRRLL 399
S D +KI DL + RL+
Sbjct: 247 SSDGTLKILDLLEGRLI 263
Score = 267 (99.0 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 70/248 (28%), Positives = 121/248 (48%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG ++ FSP +A+AS +LW + F+ H V +++F ++
Sbjct: 57 VGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFS---AD 113
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G LA+ ++D S+K+W++ + L +L H + V KF P GR + +C D + ++
Sbjct: 114 GQF--LATASEDKSIKVWNMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 269 -DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
DT + N F + + F+P+G + + DH+ ++WD+ + + H + H
Sbjct: 171 WDTTNKQCVNNFSDSVGF-ANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSG 229
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V C+SF G+ + T D ++ DL GR I L+GH VF+V FS G ++G
Sbjct: 230 GVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGG 289
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 290 ADTQVLLW 297
Score = 220 (82.5 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 58/220 (26%), Positives = 102/220 (46%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH + +++F P + LA+ + D + LW+ GH+ V
Sbjct: 10 LERYFKGHKAAITSVDFSPSGKQ-----LATASWDTFLMLWNCKPQARAFRYVGHKDV-V 63
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFR-----VSRIKFHPSGRFLGTCCW 300
+ ++F P G L + D + RL P + E F+ V + F G+FL T
Sbjct: 64 TSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSE-FKAHTAPVRSVDFSADGQFLATASE 122
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D S ++W++ + + + H V C F DG ++ + D ++WD +C+
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ VDF+P+G +A+ D+ VKIWD+R +LL+
Sbjct: 183 SDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQ 222
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 277 (102.6 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 68/213 (31%), Positives = 104/213 (48%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
++ RGH C G + S+ + L SC++D S++ W L T +GH + V
Sbjct: 335 MKILRGH-C--GPVYSTRFLSDSS--GLLSCSEDMSIRYWDLRSFTNTVLYQGHA-YPVW 388
Query: 247 RIKFHPSGRFLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301
+ P + + D + W D PL GH V +KFHP+ +L T D
Sbjct: 389 DLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHL-LDVDCVKFHPNSNYLATGSTD 447
Query: 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
+ RLW QG V GH PV ++F +G +A+ G D ++WDL +G L
Sbjct: 448 KTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR 507
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
GH ++ S+ FSPD +A+ S DN+V++WD+R
Sbjct: 508 GHTDNITSLTFSPDSSLIASASMDNSVRVWDIR 540
Score = 223 (83.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 63/214 (29%), Positives = 94/214 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ F DS + + S + W + ++GH V ++ P
Sbjct: 340 GHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISP----- 394
Query: 210 AVCSL--ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR 267
CSL AS + D + +LWS D+ PL GH V +KFHP+ +L T D + R
Sbjct: 395 --CSLYFASASHDRTARLWSFDRTYPLRIYAGHL-LDVDCVKFHPNSNYLATGSTDKTVR 451
Query: 268 L-DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322
L T N GH V + F P+G++L + D +LWDL G GH
Sbjct: 452 LWSTQQGNSVRLFTGHRG-PVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHT 510
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ ++F D S++A+ +D RVWD+R C
Sbjct: 511 DNITSLTFSPDSSLIASASMDNSVRVWDIRNTYC 544
Score = 189 (71.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 232 TPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHS---WRLD--TPLANLEGHEPFRVSR 285
T + L GH P +R SG L +C D S W L T +GH + V
Sbjct: 333 TEMKILRGHCGPVYSTRFLSDSSG--LLSCSEDMSIRYWDLRSFTNTVLYQGHA-YPVWD 389
Query: 286 IKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAF 345
+ P + + D + RLW ++ + GH V C+ F + + +ATG D
Sbjct: 390 LDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKT 449
Query: 346 GRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQL 405
R+W + G + GH V ++ FSP+G +LA+ ED +K+WDL L K +L
Sbjct: 450 VRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYK---EL 506
Query: 406 LPNSIGVTSL 415
++ +TSL
Sbjct: 507 RGHTDNITSL 516
Score = 151 (58.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 57/187 (30%), Positives = 78/187 (41%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD---- 269
LA+ + VKLWSL + L + E H VSRI+ L D D
Sbjct: 283 LAAGFDNSCVKLWSL-RSKKLKS-EPHL-VDVSRIR-------LACDILDEEEEEDDSAG 332
Query: 270 TPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
T + L GH P +R SG L +C D S R WDL + +GH PV+ +
Sbjct: 333 TEMKILRGHCGPVYSTRFLSDSSG--LLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDL 390
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
A+ D R+W + GHL V V F P+ +LATGS D V
Sbjct: 391 DISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTV 450
Query: 389 KIWDLRK 395
++W ++
Sbjct: 451 RLWSTQQ 457
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 276 (102.2 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 64/186 (34%), Positives = 93/186 (50%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT 270
L SC++D S++ W L T +GH + V + P + + D + W D
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVWDVDISPFSLYFASGSHDRTARLWSFDR 415
Query: 271 --PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
PL GH V +KFHP+ +L T D + RLW QG V GH PV +
Sbjct: 416 TYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSL 474
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
SF +G +A+ G D ++WDL +G L GH S+ S+ FSPD +A+ S DN+V
Sbjct: 475 SFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSV 534
Query: 389 KIWDLR 394
++WD+R
Sbjct: 535 RVWDIR 540
Score = 211 (79.3 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 67/254 (26%), Positives = 105/254 (41%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ F DS + + S + W + ++GH V ++ P
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFS--- 396
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
AS + D + +LWS D+ PL GH V +KFHP+ +L T D + RL
Sbjct: 397 --LYFASGSHDRTARLWSFDRTYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTDKTVRLW 453
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
N GH V + F P+G++L + D +LWDL G GH
Sbjct: 454 SAQQGNSVRLFTGHRG-PVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDS 512
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRT-----------GRCIMFLEGHLKSVFSVDFS 373
+ ++F D ++A+ +D RVWD+R+ G + G + +V SV F
Sbjct: 513 ITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFM 572
Query: 374 PDGYHLATG-SEDN 386
L TG +++N
Sbjct: 573 ACNLLLVTGITQEN 586
Score = 194 (73.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 57/190 (30%), Positives = 86/190 (45%)
Query: 232 TPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHS---WRLD--TPLANLEGHEPFRVSR 285
T + L GH P +R SG L +C D S W L T +GH + V
Sbjct: 333 TEMKILRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVWD 389
Query: 286 IKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAF 345
+ P + + D + RLW ++ + GH V C+ F + + +ATG D
Sbjct: 390 VDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKT 449
Query: 346 GRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQL 405
R+W + G + GH V S+ FSP+G +LA+ ED +K+WDL L K +L
Sbjct: 450 VRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFK---EL 506
Query: 406 LPNSIGVTSL 415
++ +TSL
Sbjct: 507 RGHTDSITSL 516
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 54/183 (29%), Positives = 78/183 (42%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA 273
LA+ + +KLWSL + L + E H SRI+ D++ T +
Sbjct: 283 LAAGFDNSCIKLWSL-RSKKLKS-EPHH-VDTSRIRLACDTLEEEENEEDNT---GTEMK 336
Query: 274 NLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
L GH P +R SG L +C D S R WDL + +GH PV+ +
Sbjct: 337 ILRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISP 394
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
A+G D R+W + GHL V V F P+ +LATGS D V++W
Sbjct: 395 FSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 454
Query: 393 LRK 395
++
Sbjct: 455 AQQ 457
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 255 (94.8 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 75/244 (30%), Positives = 112/244 (45%)
Query: 158 CS-FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLAS 216
CS FSPD + + TAS G +W L+ GH V + F P +G + +AS
Sbjct: 31 CSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP---DGRL--IAS 85
Query: 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP-- 271
+ D S++LW + + L L+GH+ V + F P + L + WD W + +
Sbjct: 86 SSSDHSIRLWDVARSKCLHVLKGHQR-SVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR 144
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL--HQ-EGHGKPVYCM 328
+ L GH + F P+ L T WD + +WDL V+ H EGH + C+
Sbjct: 145 VHLLVGHCD-SIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCL 203
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+ G ++A+G D VW T + L+GH V S+ FSPD LA+ V
Sbjct: 204 CYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTV 262
Query: 389 KIWD 392
K+WD
Sbjct: 263 KVWD 266
Score = 250 (93.1 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 71/242 (29%), Positives = 108/242 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ C FSPD + +A++S +LW V + + +GH +V + F P +
Sbjct: 66 GHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQ- 124
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSW 266
LAS D +W + + L GH + F P+ L T WD H W
Sbjct: 125 ----LASGGWDKRAIVWEVQSGRRVHLLVGHCD-SIQSSDFSPTSDSLATGSWDSTVHIW 179
Query: 267 --RLDTPLA---NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
R TP+ NLEGH +S + + SG L + WD + +W L +GH
Sbjct: 180 DLRASTPVVSYHNLEGHTG-NISCLCYSASG-LLASGSWDKTICVWKPTTNNLPLQLKGH 237
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
V ++F D +A+ G +VWD TG+C+ L+G L + F+PDG L +
Sbjct: 238 TIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVS 297
Query: 382 GS 383
G+
Sbjct: 298 GA 299
Score = 237 (88.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 61/151 (40%), Positives = 80/151 (52%)
Query: 250 FHPSGRFLGTCCWD---HSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304
F P GR L T D + W + L L GH V F P GR + + DHS
Sbjct: 34 FSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRG-PVKSCCFSPDGRLIASSSSDHSI 92
Query: 305 RLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH 363
RLWD+ + + LH +GH + V +SF D +A+GG D VW++++GR + L GH
Sbjct: 93 RLWDVARSK-CLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGH 151
Query: 364 LKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
S+ S DFSP LATGS D+ V IWDLR
Sbjct: 152 CDSIQSSDFSPTSDSLATGSWDSTVHIWDLR 182
Score = 184 (69.8 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 46/152 (30%), Positives = 68/152 (44%)
Query: 267 RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVY 326
RL G V+ F P GR L T D +W G+ + GH PV
Sbjct: 13 RLAVGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVK 72
Query: 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
F DG ++A+ D R+WD+ +C+ L+GH +SV +V FSPD LA+G D
Sbjct: 73 SCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDK 132
Query: 387 AVKIWDLRKRR----LLKWCTQLLPNSIGVTS 414
+W+++ R L+ C + + TS
Sbjct: 133 RAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTS 164
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 255 (94.8 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 70/262 (26%), Positives = 126/262 (48%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ +S FSP+ + +A++S L K+W + + +T GH + + + S+
Sbjct: 17 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS---SDS 73
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ L S + D ++K+W + L L+GH + V F+P + + +D S W
Sbjct: 74 NL--LVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIW 130
Query: 267 RLDTP--LANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ--EVLHQEGH 321
+ T L L H +P VS + F+ G + + +D R+WD GQ + L + +
Sbjct: 131 DVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 188
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV--DFS-PDGYH 378
PV + F +G + LD ++WD G+C+ GH + + +FS G
Sbjct: 189 -PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 247
Query: 379 LATGSEDNAVKIWDLRKRRLLK 400
+ +GSEDN V IW+L+ + +++
Sbjct: 248 IVSGSEDNLVYIWNLQTKEIVQ 269
Score = 231 (86.4 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 63/228 (27%), Positives = 104/228 (45%)
Query: 182 PECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
P L T GH V +++F P G LAS + D +K+W + GH+
Sbjct: 7 PNYALKFTLAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHK 61
Query: 242 PFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLG 296
+S + + L + D + W + + L L+GH + V F+P +
Sbjct: 62 -LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIV 119
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ +D S R+WD+ G+ + H PV + F DGS++ + D R+WD +G+C
Sbjct: 120 SGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 179
Query: 357 IMFL-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
+ L + V V FSP+G ++ + DN +K+WD K + LK T
Sbjct: 180 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 227
Score = 222 (83.2 bits), Expect = 7.3e-17, P = 7.3e-17
Identities = 67/248 (27%), Positives = 117/248 (47%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
IS ++S DS + +AS K+W V + ++T +GH V F+P + +
Sbjct: 64 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-----LI 118
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP- 271
S + D SV++W + L L H +P VS + F+ G + + +D R+ DT
Sbjct: 119 VSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTAS 176
Query: 272 ---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L L + VS +KF P+G+++ D++ +LWD ++G+ + GH YC+
Sbjct: 177 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 236
Query: 329 --SFQGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS-- 383
+F G + +G D +W+L+T + L+GH V S P +A+ +
Sbjct: 237 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 296
Query: 384 EDNAVKIW 391
D +K+W
Sbjct: 297 NDKTIKLW 304
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 255 (94.8 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 70/262 (26%), Positives = 126/262 (48%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ +S FSP+ + +A++S L K+W + + +T GH + + + S+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS---SDS 99
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ L S + D ++K+W + L L+GH + V F+P + + +D S W
Sbjct: 100 NL--LVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 267 RLDTP--LANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ--EVLHQEGH 321
+ T L L H +P VS + F+ G + + +D R+WD GQ + L + +
Sbjct: 157 DVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV--DFS-PDGYH 378
PV + F +G + LD ++WD G+C+ GH + + +FS G
Sbjct: 215 -PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 273
Query: 379 LATGSEDNAVKIWDLRKRRLLK 400
+ +GSEDN V IW+L+ + +++
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQ 295
Score = 231 (86.4 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 63/228 (27%), Positives = 104/228 (45%)
Query: 182 PECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
P L T GH V +++F P G LAS + D +K+W + GH+
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHK 87
Query: 242 PFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLG 296
+S + + L + D + W + + L L+GH + V F+P +
Sbjct: 88 -LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIV 145
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ +D S R+WD+ G+ + H PV + F DGS++ + D R+WD +G+C
Sbjct: 146 SGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 357 IMFL-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
+ L + V V FSP+G ++ + DN +K+WD K + LK T
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 222 (83.2 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 67/248 (27%), Positives = 117/248 (47%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
IS ++S DS + +AS K+W V + ++T +GH V F+P + +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-----LI 144
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP- 271
S + D SV++W + L L H +P VS + F+ G + + +D R+ DT
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 272 ---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L L + VS +KF P+G+++ D++ +LWD ++G+ + GH YC+
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Query: 329 --SFQGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS-- 383
+F G + +G D +W+L+T + L+GH V S P +A+ +
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 384 EDNAVKIW 391
D +K+W
Sbjct: 323 NDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 255 (94.8 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 70/262 (26%), Positives = 126/262 (48%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ +S FSP+ + +A++S L K+W + + +T GH + + + S+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS---SDS 99
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ L S + D ++K+W + L L+GH + V F+P + + +D S W
Sbjct: 100 NL--LVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 267 RLDTP--LANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ--EVLHQEGH 321
+ T L L H +P VS + F+ G + + +D R+WD GQ + L + +
Sbjct: 157 DVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV--DFS-PDGYH 378
PV + F +G + LD ++WD G+C+ GH + + +FS G
Sbjct: 215 -PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 273
Query: 379 LATGSEDNAVKIWDLRKRRLLK 400
+ +GSEDN V IW+L+ + +++
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQ 295
Score = 231 (86.4 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 63/228 (27%), Positives = 104/228 (45%)
Query: 182 PECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
P L T GH V +++F P G LAS + D +K+W + GH+
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHK 87
Query: 242 PFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLG 296
+S + + L + D + W + + L L+GH + V F+P +
Sbjct: 88 -LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIV 145
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ +D S R+WD+ G+ + H PV + F DGS++ + D R+WD +G+C
Sbjct: 146 SGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 357 IMFL-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
+ L + V V FSP+G ++ + DN +K+WD K + LK T
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 222 (83.2 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 67/248 (27%), Positives = 117/248 (47%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
IS ++S DS + +AS K+W V + ++T +GH V F+P + +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-----LI 144
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP- 271
S + D SV++W + L L H +P VS + F+ G + + +D R+ DT
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 272 ---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L L + VS +KF P+G+++ D++ +LWD ++G+ + GH YC+
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Query: 329 --SFQGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS-- 383
+F G + +G D +W+L+T + L+GH V S P +A+ +
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 384 EDNAVKIW 391
D +K+W
Sbjct: 323 NDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 255 (94.8 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 70/262 (26%), Positives = 126/262 (48%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ +S FSP+ + +A++S L K+W + + +T GH + + + S+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS---SDS 99
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ L S + D ++K+W + L L+GH + V F+P + + +D S W
Sbjct: 100 NL--LVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 267 RLDTP--LANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ--EVLHQEGH 321
+ T L L H +P VS + F+ G + + +D R+WD GQ + L + +
Sbjct: 157 DVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV--DFS-PDGYH 378
PV + F +G + LD ++WD G+C+ GH + + +FS G
Sbjct: 215 -PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 273
Query: 379 LATGSEDNAVKIWDLRKRRLLK 400
+ +GSEDN V IW+L+ + +++
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQ 295
Score = 231 (86.4 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 63/228 (27%), Positives = 104/228 (45%)
Query: 182 PECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
P L T GH V +++F P G LAS + D +K+W + GH+
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHK 87
Query: 242 PFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLG 296
+S + + L + D + W + + L L+GH + V F+P +
Sbjct: 88 -LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIV 145
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ +D S R+WD+ G+ + H PV + F DGS++ + D R+WD +G+C
Sbjct: 146 SGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 357 IMFL-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
+ L + V V FSP+G ++ + DN +K+WD K + LK T
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 222 (83.2 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 67/248 (27%), Positives = 117/248 (47%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
IS ++S DS + +AS K+W V + ++T +GH V F+P + +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-----LI 144
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP- 271
S + D SV++W + L L H +P VS + F+ G + + +D R+ DT
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 272 ---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L L + VS +KF P+G+++ D++ +LWD ++G+ + GH YC+
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Query: 329 --SFQGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS-- 383
+F G + +G D +W+L+T + L+GH V S P +A+ +
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 384 EDNAVKIW 391
D +K+W
Sbjct: 323 NDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 255 (94.8 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 70/262 (26%), Positives = 126/262 (48%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ +S FSP+ + +A++S L K+W + + +T GH + + + S+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS---SDS 99
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ L S + D ++K+W + L L+GH + V F+P + + +D S W
Sbjct: 100 NL--LVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 267 RLDTP--LANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ--EVLHQEGH 321
+ T L L H +P VS + F+ G + + +D R+WD GQ + L + +
Sbjct: 157 DVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV--DFS-PDGYH 378
PV + F +G + LD ++WD G+C+ GH + + +FS G
Sbjct: 215 -PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 273
Query: 379 LATGSEDNAVKIWDLRKRRLLK 400
+ +GSEDN V IW+L+ + +++
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQ 295
Score = 231 (86.4 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 63/228 (27%), Positives = 104/228 (45%)
Query: 182 PECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
P L T GH V +++F P G LAS + D +K+W + GH+
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHK 87
Query: 242 PFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLG 296
+S + + L + D + W + + L L+GH + V F+P +
Sbjct: 88 -LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIV 145
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ +D S R+WD+ G+ + H PV + F DGS++ + D R+WD +G+C
Sbjct: 146 SGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 357 IMFL-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
+ L + V V FSP+G ++ + DN +K+WD K + LK T
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 222 (83.2 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 67/248 (27%), Positives = 117/248 (47%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
IS ++S DS + +AS K+W V + ++T +GH V F+P + +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-----LI 144
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP- 271
S + D SV++W + L L H +P VS + F+ G + + +D R+ DT
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 272 ---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L L + VS +KF P+G+++ D++ +LWD ++G+ + GH YC+
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Query: 329 --SFQGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS-- 383
+F G + +G D +W+L+T + L+GH V S P +A+ +
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 384 EDNAVKIW 391
D +K+W
Sbjct: 323 NDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 255 (94.8 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 70/262 (26%), Positives = 126/262 (48%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ +S FSP+ + +A++S L K+W + + +T GH + + + S+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS---SDS 99
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ L S + D ++K+W + L L+GH + V F+P + + +D S W
Sbjct: 100 NL--LVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 267 RLDTP--LANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ--EVLHQEGH 321
+ T L L H +P VS + F+ G + + +D R+WD GQ + L + +
Sbjct: 157 DVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV--DFS-PDGYH 378
PV + F +G + LD ++WD G+C+ GH + + +FS G
Sbjct: 215 -PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 273
Query: 379 LATGSEDNAVKIWDLRKRRLLK 400
+ +GSEDN V IW+L+ + +++
Sbjct: 274 IVSGSEDNLVYIWNLQTKEIVQ 295
Score = 231 (86.4 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 63/228 (27%), Positives = 104/228 (45%)
Query: 182 PECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
P L T GH V +++F P G LAS + D +K+W + GH+
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHK 87
Query: 242 PFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLG 296
+S + + L + D + W + + L L+GH + V F+P +
Sbjct: 88 -LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIV 145
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ +D S R+WD+ G+ + H PV + F DGS++ + D R+WD +G+C
Sbjct: 146 SGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 357 IMFL-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
+ L + V V FSP+G ++ + DN +K+WD K + LK T
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 222 (83.2 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 67/248 (27%), Positives = 117/248 (47%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
IS ++S DS + +AS K+W V + ++T +GH V F+P + +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-----LI 144
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP- 271
S + D SV++W + L L H +P VS + F+ G + + +D R+ DT
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 272 ---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L L + VS +KF P+G+++ D++ +LWD ++G+ + GH YC+
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Query: 329 --SFQGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS-- 383
+F G + +G D +W+L+T + L+GH V S P +A+ +
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 384 EDNAVKIW 391
D +K+W
Sbjct: 323 NDKTIKLW 330
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 273 (101.2 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 74/256 (28%), Positives = 123/256 (48%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTV-PECELVQTFRGHDCNVGAIEFHPLPSE 208
G I+ FSP+ + +AT SW LW++ P+ + + GH + +++F PL
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFR-YVGHKDVITSVQFSPL--- 71
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
G + LAS ++D +++LW DK + + H V + F G+FL + D S
Sbjct: 72 GNL--LASASRDRTIRLWIPDKRGKSSEFKAHTA-PVRSVDFSADGQFLASASEDKSIKV 128
Query: 266 WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
W + L +L H + V KF P GR + +C D + ++WD Q V +
Sbjct: 129 WNMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVG 187
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
++F +G+ +A+ G D ++WD+R + + + H V V F P G +L T S
Sbjct: 188 FANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITAS 247
Query: 384 EDNAVKIWDLRKRRLL 399
D +KI DL + RL+
Sbjct: 248 SDGTLKILDLLEGRLI 263
Score = 266 (98.7 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 72/248 (29%), Positives = 120/248 (48%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG I+ FSP +A+AS +LW + F+ H V +++F ++
Sbjct: 57 VGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFS---AD 113
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G LAS ++D S+K+W++ + L +L H + V KF P GR + +C D + ++
Sbjct: 114 GQF--LASASEDKSIKVWNMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 269 -DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
DT + N F + + F+P+G + + DH+ ++WD+ + + H + H
Sbjct: 171 WDTTNKQCVNNFSDFVGF-ANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSG 229
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V C+SF G+ + T D ++ DL GR I L+GH VF+V FS G +G
Sbjct: 230 GVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGG 289
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 290 ADAQVLLW 297
Score = 212 (79.7 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 59/225 (26%), Positives = 105/225 (46%)
Query: 182 PECELVQT-FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
PE +++ F+GH + +++F P G LA+ + D + LWSL GH
Sbjct: 5 PEDPVLERYFKGHKAAITSVDFSP---NGK--QLATGSWDTFLMLWSLRPQARAFRYVGH 59
Query: 241 EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFR-----VSRIKFHPSGRFL 295
+ ++ ++F P G L + D + RL P + E F+ V + F G+FL
Sbjct: 60 KDV-ITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSE-FKAHTAPVRSVDFSADGQFL 117
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
+ D S ++W++ + + + H V C F DG ++ + D ++WD +
Sbjct: 118 ASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
C+ + V F+P+G +A+ D+ VKIWD+R +LL+
Sbjct: 178 CVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQ 222
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 273 (101.2 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 87/320 (27%), Positives = 150/320 (46%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPS 207
VG T I+ +F+P VA++S +LWT P + T F+ H +V ++ F
Sbjct: 57 VGHTDVITGVNFAPSGSLVASSSRDQTVRLWT-PSIKGESTVFKAHTASVRSVHFS---R 112
Query: 208 EGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR 267
+G L + + D SVK+W +++ L +L H + V +F P GR + +C D + R
Sbjct: 113 DGQ--RLVTASDDKSVKVWGVERKKFLYSLNRHTNW-VRCARFSPDGRLIASCGDDRTVR 169
Query: 268 L-DTP---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
L DT N+ + + F+ SG + + D++ ++WD+ + + H + H
Sbjct: 170 LWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNA 229
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V C SF G+ + +G D+ ++ DL GR I L GH V +V FS DG A+G
Sbjct: 230 GVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGG 289
Query: 384 EDNAVKIW-----DLRKRRLL-KWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISS 437
D+ V +W L R LL K ++ P+ L D+Y +P G + +
Sbjct: 290 ADSQVLMWKTNFDSLNYRELLSKHSKRVTPDP---PPHLMDIYPRSHHRHHPQNGTVEIN 346
Query: 438 ALKEQVEPIPLLLDIQKLTF 457
+ + P ++++ ++ F
Sbjct: 347 PVADTQSTDPQVVEVGRVVF 366
Score = 249 (92.7 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 71/251 (28%), Positives = 119/251 (47%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTV-PECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
IS F+P+++ +AT S +W + P+ + F GH + + F P G++
Sbjct: 21 ISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFR-FVGHTDVITGVNFAP---SGSL-- 74
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT 270
+AS ++D +V+LW+ + H V + F G+ L T D S W ++
Sbjct: 75 VASSSRDQTVRLWTPSIKGESTVFKAHTA-SVRSVHFSRDGQRLVTASDDKSVKVWGVER 133
Query: 271 P--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L +L H + V +F P GR + +C D + RLWD + Q + +G +
Sbjct: 134 KKFLYSLNRHTNW-VRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFV 192
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F G+ +A+ G D ++WD+RT + I + H V F P G +L +GS D+ +
Sbjct: 193 DFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTI 252
Query: 389 KIWDLRKRRLL 399
KI DL + RL+
Sbjct: 253 KILDLLEGRLI 263
Score = 223 (83.6 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 62/221 (28%), Positives = 104/221 (47%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH + +F+P + A SC D S+ +W+L GH +
Sbjct: 10 LERHFKGHKDVISCADFNPNNKQLAT---GSC--DKSLMIWNLAPKARAFRFVGHTDV-I 63
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEP-FR-----VSRIKFHPSGRFLGTCC 299
+ + F PSG + + D + RL TP +++G F+ V + F G+ L T
Sbjct: 64 TGVNFAPSGSLVASSSRDQTVRLWTP--SIKGESTVFKAHTASVRSVHFSRDGQRLVTAS 121
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D S ++W + + + + H V C F DG ++A+ G D R+WD + +CI
Sbjct: 122 DDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINI 181
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ S VDF+ G +A+ DN +KIWD+R +L++
Sbjct: 182 FTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQ 222
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 269 (99.8 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 75/247 (30%), Positives = 115/247 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T I +F+P S VAT S KLW V E V T GH + ++ F+
Sbjct: 175 GHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDR- 233
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
L + + D + LW + + L GH +S ++F+ + T D S ++
Sbjct: 234 ----LVTGSFDHTAILWDVPSGRKVHVLSGHRG-EISCVQFNWDCSLIATASLDKSCKVW 288
Query: 269 DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D LA L GH V + F+ +G+ + T D + R++ + Q + EGH
Sbjct: 289 DAEGGQCLATLLGHND-EVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGE 347
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
+ + F GS V T +D RVW ++TG C+ LEGH +FS F+ +G + TGS+
Sbjct: 348 ISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSK 407
Query: 385 DNAVKIW 391
DN +IW
Sbjct: 408 DNTCRIW 414
Score = 264 (98.0 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 69/236 (29%), Positives = 110/236 (46%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
+P VAT S+ CKLW+ + TFRGH + + F+P + +A+ + D
Sbjct: 144 NPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQST-----LVATGSMD 198
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLAN----L 275
+ KLW ++ ++ L GH +S + F+ +G L T +DH+ L D P L
Sbjct: 199 TTAKLWDVESGEEVSTLAGHFAEIIS-LCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVL 257
Query: 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS 335
GH +S ++F+ + T D S ++WD GQ + GH V + F G
Sbjct: 258 SGHRG-EISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQ 316
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++AT D RV+ T +C+ LEGH + V F+ G + T S D ++W
Sbjct: 317 LIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVW 372
Score = 257 (95.5 bits), Expect = 9.3e-20, P = 9.3e-20
Identities = 71/243 (29%), Positives = 114/243 (46%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P++ +F+ T S+ CK+W E + T GH V AI F+ P V
Sbjct: 94 PLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNN-PYGDKV-- 150
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT 270
A+ + D + KLWS + GH + + F+P + T D + W +++
Sbjct: 151 -ATGSFDKTCKLWSAETGKCFYTFRGHTA-EIVCLAFNPQSTLVATGSMDTTAKLWDVES 208
Query: 271 --PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
++ L GH +S + F+ +G L T +DH+ LWD+ G++V GH + C+
Sbjct: 209 GEEVSTLAGHFAEIIS-LCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCV 267
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F D S++AT LD +VWD G+C+ L GH V V F+ G +AT S D
Sbjct: 268 QFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTS 327
Query: 389 KIW 391
+++
Sbjct: 328 RVF 330
Score = 209 (78.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 60/205 (29%), Positives = 91/205 (44%)
Query: 199 AIEFHPLP-SEGAVCSLASC----AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH-P 252
A++ H LP + A SC + D + K+W L LEGH V I F+ P
Sbjct: 87 ALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNV-VYAIAFNNP 145
Query: 253 SGRFLGTCCWDHS---WRLDTPLA--NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
G + T +D + W +T GH + + F+P + T D + +LW
Sbjct: 146 YGDKVATGSFDKTCKLWSAETGKCFYTFRGHTA-EIVCLAFNPQSTLVATGSMDTTAKLW 204
Query: 308 DLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSV 367
D+ G+EV GH + + F G + TG D +WD+ +GR + L GH +
Sbjct: 205 DVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEI 264
Query: 368 FSVDFSPDGYHLATGSEDNAVKIWD 392
V F+ D +AT S D + K+WD
Sbjct: 265 SCVQFNWDCSLIATASLDKSCKVWD 289
Score = 199 (75.1 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 48/159 (30%), Positives = 79/159 (49%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFH-PSGRFLGTC 298
++ + F+ SG T +D + ++ DT L LEGH V I F+ P G + T
Sbjct: 95 LTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNV-VYAIAFNNPYGDKVATG 153
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
+D + +LW G+ GH + C++F ++VATG +D ++WD+ +G +
Sbjct: 154 SFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVS 213
Query: 359 FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
L GH + S+ F+ G L TGS D+ +WD+ R
Sbjct: 214 TLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGR 252
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 274 (101.5 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 69/213 (32%), Positives = 103/213 (48%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
++ RGH V + F S G L SC++D S++ W L T +GH + V
Sbjct: 331 MKVLRGHCGPVYSTRFLA-DSSG----LLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVW 384
Query: 247 RIKFHPSGRFLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301
+ P + + D + W D PL GH V +KFHP+ +L T D
Sbjct: 385 DLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTD 443
Query: 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
+ RLW QG V GH PV ++F +G +A+ G D ++WDL +G L
Sbjct: 444 KTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR 503
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
GH ++ S+ FSPD +A+ S DN+V++WD+R
Sbjct: 504 GHTDNITSLTFSPDSSLVASASMDNSVRVWDIR 536
Score = 222 (83.2 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 70/254 (27%), Positives = 107/254 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ F DS + + S + W + ++GH V ++ P
Sbjct: 336 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHS--- 392
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
AS + D + +LWS D+ PL GH V +KFHP+ +L T D + RL
Sbjct: 393 --LYFASASHDRTARLWSFDRTYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTDKTVRLW 449
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
T N GH V + F P+G++L + D +LWDL G GH
Sbjct: 450 STQQGNSVRLFTGHRG-PVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN 508
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC-----------IMFLEGHLKSVFSVDFS 373
+ ++F D S+VA+ +D RVWD+R+ C + G + +V SV F
Sbjct: 509 ITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFM 568
Query: 374 PDGYHLATG-SEDN 386
L TG +++N
Sbjct: 569 ACNLLLVTGITQEN 582
Score = 202 (76.2 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 77/284 (27%), Positives = 118/284 (41%)
Query: 139 LTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLC-KLWTVPECELVQTFRGHDCNV 197
LT++ Y + ++ SPDS+ +A A + C KLW++ +L H +V
Sbjct: 252 LTTIYFYAFY-NTEQLLNTAEVSPDSKLLA-AGFDNSCIKLWSLRSKKLKS--EPHQVDV 307
Query: 198 GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRF 256
I C D L T + L GH P +R SG
Sbjct: 308 SRIHL--------ACDFLEEEDDEDDNL-----GTEMKVLRGHCGPVYSTRFLADSSG-- 352
Query: 257 LGTCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ 311
L +C D S W L T +GH + V + P + + D + RLW ++
Sbjct: 353 LLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVWDLDISPHSLYFASASHDRTARLWSFDR 411
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ GH V C+ F + + +ATG D R+W + G + GH V S+
Sbjct: 412 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLA 471
Query: 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
FSP+G +LA+ ED +K+WDL L K +L ++ +TSL
Sbjct: 472 FSPNGKYLASAGEDQRLKLWDLASGTLYK---ELRGHTDNITSL 512
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 273 (101.2 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 69/213 (32%), Positives = 103/213 (48%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
++ RGH V + F S G L SC++D S++ W L T +GH + V
Sbjct: 335 MKVLRGHCGPVYSTRFLA-DSSG----LLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVW 388
Query: 247 RIKFHPSGRFLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301
+ P + + D + W D PL GH V +KFHP+ +L T D
Sbjct: 389 DVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTD 447
Query: 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
+ RLW QG V GH PV ++F +G +A+ G D ++WDL +G L
Sbjct: 448 KTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELR 507
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
GH ++ S+ FSPD +A+ S DN+V++WD+R
Sbjct: 508 GHTDNITSLTFSPDSSLIASASMDNSVRVWDIR 540
Score = 213 (80.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 68/254 (26%), Positives = 105/254 (41%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ F DS + + S + W + ++GH V ++ P
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYS--- 396
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
AS + D + +LWS D+ PL GH V +KFHP+ +L T D + RL
Sbjct: 397 --LYFASGSHDRTARLWSFDRTYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTDKTVRLW 453
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
N GH V + F P+G++L + D +LWDL G GH
Sbjct: 454 SAQQGNSVRLFTGHRG-PVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDN 512
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC-----------IMFLEGHLKSVFSVDFS 373
+ ++F D S++A+ +D RVWD+R C + G + +V SV F
Sbjct: 513 ITSLTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMSNVLSVQFM 572
Query: 374 PDGYHLATG-SEDN 386
L TG +++N
Sbjct: 573 ACNLLLVTGITQEN 586
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 76/284 (26%), Positives = 119/284 (41%)
Query: 139 LTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLC-KLWTVPECELVQTFRGHDCNV 197
LT++ Y + ++ SP+S+ +A A + C KLW++ +L H +V
Sbjct: 256 LTTICFYAFY-NTEQLLNTAEISPESKLLA-AGFDNSCIKLWSLRSKKLKP--EPHRVDV 311
Query: 198 GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRF 256
I C + D D T + L GH P +R SG
Sbjct: 312 SRIHL--------ACDILEEEDDEDD-----DVGTEMKVLRGHCGPVYSTRFLADSSG-- 356
Query: 257 LGTCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ 311
L +C D S W L T +GH + V + P + + D + RLW ++
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVWDVDISPYSLYFASGSHDRTARLWSFDR 415
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ GH V C+ F + + +ATG D R+W + G + GH V S+
Sbjct: 416 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 475
Query: 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
FSP+G +LA+ ED +K+WDL L K +L ++ +TSL
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLFK---ELRGHTDNITSL 516
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 270 (100.1 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 76/256 (29%), Positives = 118/256 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ SP+ + +ATASW LW + GH V +++F P G
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSP---HG 72
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LAS ++D +V+LW DK + + H V + F G+FL T D S W
Sbjct: 73 NL--LASASRDRTVRLWIPDKRGKFSEFKAHTA-PVRSVDFSADGQFLATASEDKSIKVW 129
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGK 323
+ L +L H + V KF P GR + +C D + ++WD Q V + + G
Sbjct: 130 SMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
+ + F G+ +A+ G D +VWD+R + + + H V + F P G +L T S
Sbjct: 189 ANF-VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITAS 247
Query: 384 EDNAVKIWDLRKRRLL 399
D +KI DL + RL+
Sbjct: 248 SDGTLKILDLLEGRLI 263
Score = 268 (99.4 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 72/248 (29%), Positives = 120/248 (48%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG ++ FSP +A+AS +LW + F+ H V +++F ++
Sbjct: 57 VGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFS---AD 113
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G LA+ ++D S+K+WS+ + L +L H + V KF P GR + +C D + ++
Sbjct: 114 GQF--LATASEDKSIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 269 -DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
DT + N F + + F+PSG + + D + ++WD+ + + H + H
Sbjct: 171 WDTTNKQCVNNFSDSVGF-ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG 229
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V C+SF G+ + T D ++ DL GR I L+GH VF+V FS G A+G
Sbjct: 230 GVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGG 289
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 290 ADTQVLLW 297
Score = 211 (79.3 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 56/220 (25%), Positives = 97/220 (44%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH + +++ P G LA+ + D + LW+ GH+ V
Sbjct: 10 LERYFKGHKAAITSLDLSP---NGK--QLATASWDTFLMLWNFKPHARAYRYVGHKDV-V 63
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLGTCCW 300
+ ++F P G L + D + RL P + + H V + F G+FL T
Sbjct: 64 TSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA-PVRSVDFSADGQFLATASE 122
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D S ++W + + + + H V C F DG ++ + D ++WD +C+
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ VDF+P G +A+ D VK+WD+R +LL+
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 222
Score = 187 (70.9 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/175 (29%), Positives = 81/175 (46%)
Query: 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS 335
+GH+ ++ + P+G+ L T WD LW+ GH V + F G+
Sbjct: 15 KGHKA-AITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 336 VVATGGLDAFGRVW--DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
++A+ D R+W D R G+ F + H V SVDFS DG LAT SED ++K+W +
Sbjct: 74 LLASASRDRTVRLWIPDKR-GKFSEF-KAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 394 RKRRLL-------KW--CTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSAL 439
++R L W C + P+ + S D I + ++ N N S ++
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSV 186
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 268 (99.4 bits), Expect = 6.0e-21, P = 6.0e-21
Identities = 72/248 (29%), Positives = 120/248 (48%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG ++ FSP +A+AS +LW + F+ H V +++F ++
Sbjct: 15 VGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFS---AD 71
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G LA+ ++D S+K+WS+ + L +L H + V KF P GR + +C D + ++
Sbjct: 72 GQF--LATASEDKSIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKI 128
Query: 269 -DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
DT + N F + + F+PSG + + D + ++WD+ + + H + H
Sbjct: 129 WDTTNKQCVNNFSDSVGF-ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG 187
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V C+SF G+ + T D ++ DL GR I L+GH VF+V FS G A+G
Sbjct: 188 GVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGG 247
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 248 ADTQVLLW 255
Score = 228 (85.3 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 67/228 (29%), Positives = 105/228 (46%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
LW + GH V +++F P G + LAS ++D +V+LW DK +
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSP---HGNL--LASASRDRTVRLWIPDKRGKFSEF 56
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSG 292
+ H V + F G+FL T D S W + L +L H + V KF P G
Sbjct: 57 KAHTA-PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDG 114
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
R + +C D + ++WD Q V + + G + + F G+ +A+ G D +VWD+
Sbjct: 115 RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF-VDFNPSGTCIASAGSDQTVKVWDV 173
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
R + + + H V + F P G +L T S D +KI DL + RL+
Sbjct: 174 RVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLI 221
Score = 188 (71.2 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 47/181 (25%), Positives = 79/181 (43%)
Query: 225 LWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHE 279
LW+ GH+ V+ ++F P G L + D + RL P + + H
Sbjct: 2 LWNFKPHARAYRYVGHKDV-VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 60
Query: 280 PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVAT 339
V + F G+FL T D S ++W + + + + H V C F DG ++ +
Sbjct: 61 A-PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVS 119
Query: 340 GGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
D ++WD +C+ + VDF+P G +A+ D VK+WD+R +LL
Sbjct: 120 CSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLL 179
Query: 400 K 400
+
Sbjct: 180 Q 180
Score = 175 (66.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 49/166 (29%), Positives = 76/166 (45%)
Query: 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSV 336
GH+ V+ ++F P G L + D + RLW ++ + + H PV + F DG
Sbjct: 16 GHKDV-VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQF 74
Query: 337 VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
+AT D +VW + R + L H V FSPDG + + SED +KIWD +
Sbjct: 75 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 134
Query: 397 RLLKWCTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSALKEQ 442
+ C +S+G + ++D NP G I+SA +Q
Sbjct: 135 Q----CVNNFSDSVGFAN-----FVD----FNPS-GTCIASAGSDQ 166
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 271 (100.5 bits), Expect = 6.6e-21, P = 6.6e-21
Identities = 67/187 (35%), Positives = 98/187 (52%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD- 269
L S ++DG+V+LWSL T L +GH + V +F P G + + D W D
Sbjct: 318 LLSSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYFVSGGHDRVARLWATDH 376
Query: 270 -TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
PL GH V+ +FHP+ ++ T D + RLWD+ G V GH P++ +
Sbjct: 377 YQPLRIFAGHLA-DVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 435
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+F +G +ATG D +WD+ G + L+GH +V S+ FS DG LA+GS DN V
Sbjct: 436 TFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 495
Query: 389 KIWDLRK 395
++WD K
Sbjct: 496 RLWDAVK 502
Score = 235 (87.8 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 63/206 (30%), Positives = 97/206 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + P+ SFSPD ++ ++S G +LW++ + ++GH+ V +F P G
Sbjct: 301 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY---G 357
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
S D +LW+ D PL GH V+ +FHP+ ++ T D + RL
Sbjct: 358 YY--FVSGGHDRVARLWATDHYQPLRIFAGHLA-DVNCTRFHPNSNYVATGSADRTVRLW 414
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D N GH+ + + F P+GRFL T D LWD+ G V +GH
Sbjct: 415 DVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT 473
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWD 350
V + F DG ++A+G +D R+WD
Sbjct: 474 VCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 37/119 (31%), Positives = 54/119 (45%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V F P +L + D + RLW L ++ +GH PV+ F G
Sbjct: 299 LYGHSG-PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG 357
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+GG D R+W + + GHL V F P+ ++ATGS D V++WD+
Sbjct: 358 YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 416
Score = 149 (57.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 45/175 (25%), Positives = 75/175 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ FSP + + + +LW + ++ F GH +V FHP +
Sbjct: 343 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY- 401
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+A+ + D +V+LW + + GH+ + + F P+GRFL T D W
Sbjct: 402 ----VATGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLW 456
Query: 267 RLDTPL--ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE 319
+ L L+GH V ++F G L + D++ RLWD + E L +
Sbjct: 457 DIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETD 510
Score = 147 (56.8 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 40/140 (28%), Positives = 63/140 (45%)
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+ D E+ GH PVY SF D + + + D R+W L+T C++ +GH
Sbjct: 286 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 345
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW---------CTQLLPNSIGVTSL 415
V+ FSP GY+ +G D ++W + L+ CT+ PNS V +
Sbjct: 346 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATG 405
Query: 416 LTDLYIDVLESLNPGIGNII 435
D + + + LN GN +
Sbjct: 406 SADRTVRLWDVLN---GNCV 422
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 270 (100.1 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 62/186 (33%), Positives = 93/186 (50%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT 270
L SC++D S++ W L T +GH + V + P + + D + W D
Sbjct: 375 LLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVWDLDISPYSLYFASGSHDRTARLWSFDR 433
Query: 271 --PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
PL GH V +KFHP+ +L T D + RLW QG V GH PV +
Sbjct: 434 TYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSL 492
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+F +G +A+ G D ++WDL +G L GH ++ S+ FSPD +A+ S DN+V
Sbjct: 493 AFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSV 552
Query: 389 KIWDLR 394
++WD+R
Sbjct: 553 RVWDIR 558
Score = 211 (79.3 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 68/254 (26%), Positives = 106/254 (41%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ F DS + + S + W + ++GH V ++ P
Sbjct: 358 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYS--- 414
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
AS + D + +LWS D+ PL GH V +KFHP+ +L T D + RL
Sbjct: 415 --LYFASGSHDRTARLWSFDRTYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTDKTVRLW 471
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
N GH V + F P+G++L + D +LWDL G GH
Sbjct: 472 SAQQGNSVRLFTGHRG-PVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN 530
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLR-----------TGRCIMFLEGHLKSVFSVDFS 373
+ ++F D S++A+ +D RVWD+R +G + G + +V SV F
Sbjct: 531 ITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQMSNVLSVQFM 590
Query: 374 PDGYHLATG-SEDN 386
L TG +++N
Sbjct: 591 ACNLLLVTGITQEN 604
Score = 198 (74.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 76/284 (26%), Positives = 119/284 (41%)
Query: 139 LTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLC-KLWTVPECELVQTFRGHDCNV 197
LT++ Y + ++ SPDS+ +A A + C KLW++ +L H +V
Sbjct: 274 LTTICFYAFY-NTEQLLNTAEISPDSKLLA-AGFDNSCIKLWSLRSKKLKS--EPHQVDV 329
Query: 198 GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRF 256
I C + D + T + L GH P +R SG
Sbjct: 330 SRIHL--------ACDILEEEDDEDD-----NAGTEMKILRGHCGPVYSTRFLADSSG-- 374
Query: 257 LGTCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ 311
L +C D S W L T +GH + V + P + + D + RLW ++
Sbjct: 375 LLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVWDLDISPYSLYFASGSHDRTARLWSFDR 433
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ GH V C+ F + + +ATG D R+W + G + GH V S+
Sbjct: 434 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 493
Query: 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
FSP+G +LA+ ED +K+WDL L K +L ++ +TSL
Sbjct: 494 FSPNGKYLASAGEDQRLKLWDLASGTLYK---ELRGHTDNITSL 534
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 269 (99.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 62/186 (33%), Positives = 93/186 (50%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT 270
L SC++D S++ W L T +GH + V + P + + D + W D
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVWDLDISPYSLYFASGSHDRTARLWSFDR 415
Query: 271 --PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
PL GH V +KFHP+ +L T D + RLW QG V GH PV +
Sbjct: 416 TYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSL 474
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+F +G +A+ G D ++WDL +G L GH ++ S+ FSPD +A+ S DN+V
Sbjct: 475 AFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSV 534
Query: 389 KIWDLR 394
++WD+R
Sbjct: 535 RVWDIR 540
Score = 206 (77.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 67/254 (26%), Positives = 104/254 (40%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ F DS + + S + W + ++GH V ++ P
Sbjct: 340 GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYS--- 396
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
AS + D + +LWS D+ PL GH V +KFHP+ +L T D + RL
Sbjct: 397 --LYFASGSHDRTARLWSFDRTYPLRIYAGHLA-DVDCVKFHPNSNYLATGSTDKTVRLW 453
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
N GH V + F P+G++L + D +LWDL G GH
Sbjct: 454 SAQQGNSVRLFTGHRG-PVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN 512
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC-----------IMFLEGHLKSVFSVDFS 373
+ ++F D ++A+ +D RVWD+R C + G + +V SV F
Sbjct: 513 ITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFM 572
Query: 374 PDGYHLATG-SEDN 386
L TG +++N
Sbjct: 573 ACNLLLVTGITQEN 586
Score = 198 (74.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 76/284 (26%), Positives = 119/284 (41%)
Query: 139 LTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLC-KLWTVPECELVQTFRGHDCNV 197
LT++ Y + ++ SPDS+ +A A + C KLW++ +L H +V
Sbjct: 256 LTTICFYAFY-NTEQLLNTAEISPDSKLLA-AGFDNSCIKLWSLRSKKLKS--EPHQVDV 311
Query: 198 GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRF 256
I C + D + T + L GH P +R SG
Sbjct: 312 SRIHL--------ACDILEEEDDEDD-----NAGTEMKILRGHCGPVYSTRFLADSSG-- 356
Query: 257 LGTCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ 311
L +C D S W L T +GH + V + P + + D + RLW ++
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHA-YPVWDLDISPYSLYFASGSHDRTARLWSFDR 415
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ GH V C+ F + + +ATG D R+W + G + GH V S+
Sbjct: 416 TYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLA 475
Query: 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
FSP+G +LA+ ED +K+WDL L K +L ++ +TSL
Sbjct: 476 FSPNGKYLASAGEDQRLKLWDLASGTLYK---ELRGHTDNITSL 516
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 274 (101.5 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 75/231 (32%), Positives = 113/231 (48%)
Query: 192 GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
GH V + F P P + + S A D +++LWS + L +GH + V +F
Sbjct: 416 GHSGPVYSATFSP-PGDFVLSSSA----DTTIRLWSTKLNANLVCYKGHN-YPVWDAQFS 469
Query: 252 PSGRFLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 306
P G + +C D + W +D PL + GH V +++HP+ ++ T D + RL
Sbjct: 470 PFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLS-DVDCVQWHPNCNYIATGSSDKTVRL 528
Query: 307 WDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKS 366
WD+ G+ V GH V ++ DG +A+G D +WDL T RCI L GH
Sbjct: 529 WDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSC 588
Query: 367 VFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLT 417
V+S+ +S +G LA+GS D VK+WD+ L + NS + SL T
Sbjct: 589 VWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRT 639
Score = 241 (89.9 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 62/184 (33%), Positives = 95/184 (51%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPL-ANL---EGHEPFRVSRIKFHPS 291
L GH V F P G F+ + D + RL T L ANL +GH + V +F P
Sbjct: 414 LLGHSG-PVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHN-YPVWDAQFSPF 471
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + +C D + R+W +++ Q + GH V C+ + + + +ATG D R+WD+
Sbjct: 472 GHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDV 531
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
+TG C+ GH V S+ SPDG ++A+G ED + +WDL R + T L+ ++
Sbjct: 532 QTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCI---TPLMGHNSC 588
Query: 412 VTSL 415
V SL
Sbjct: 589 VWSL 592
Score = 226 (84.6 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
Identities = 59/213 (27%), Positives = 105/213 (49%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVP-ECELVQTFRGHDCNVGAIEFH 203
Y +G + P+ +FSP V ++S +LW+ LV ++GH+ V +F
Sbjct: 411 YTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLV-CYKGHNYPVWDAQFS 469
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
P G ASC+ D + ++WS+D+ PL + GH V +++HP+ ++ T D
Sbjct: 470 PF---GHY--FASCSHDRTARIWSMDRIQPLRIMAGHLS-DVDCVQWHPNCNYIATGSSD 523
Query: 264 HSWRL-DTPLANLE----GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
+ RL D GH +S + P GR++ + D + +WDL+ + +
Sbjct: 524 KTVRLWDVQTGECVRIFIGHRSMVLS-LAMSPDGRYMASGDEDGTIMMWDLSTARCITPL 582
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
GH V+ +S+ G+GS++A+G D ++WD+
Sbjct: 583 MGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 130 (50.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 41/183 (22%), Positives = 81/183 (44%)
Query: 143 SIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEF 202
++ C + G P+ FSP + A+ S ++W++ + ++ GH +V +++
Sbjct: 452 NLVCYK-GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQW 510
Query: 203 HPLPSEGAVCS-LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC 261
HP C+ +A+ + D +V+LW + + GH +S + P GR++ +
Sbjct: 511 HPN------CNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLS-LAMSPDGRYMASGD 563
Query: 262 WDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL 316
D + W L T + L GH V + + G L + D + +LWD+ ++
Sbjct: 564 EDGTIMMWDLSTARCITPLMGHNSC-VWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLT 622
Query: 317 HQE 319
E
Sbjct: 623 KAE 625
Score = 37 (18.1 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 13 QNTVHYGSLEEQERKRLAANKDVDDDQEK 41
Q + +G LE+ RL + D EK
Sbjct: 224 QKEIQWGLLEDSLEDRLEKTGGLLSDSEK 252
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 271 (100.5 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 67/187 (35%), Positives = 98/187 (52%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD- 269
L S ++DG+V+LWSL T L +GH + V +F P G + + D W D
Sbjct: 556 LLSSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYFVSGGHDRVARLWATDH 614
Query: 270 -TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
PL GH V+ +FHP+ ++ T D + RLWD+ G V GH P++ +
Sbjct: 615 YQPLRIFAGHLA-DVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 673
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+F +G +ATG D +WD+ G + L+GH +V S+ FS DG LA+GS DN V
Sbjct: 674 TFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 733
Query: 389 KIWDLRK 395
++WD K
Sbjct: 734 RLWDAIK 740
Score = 235 (87.8 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 63/206 (30%), Positives = 97/206 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + P+ SFSPD ++ ++S G +LW++ + ++GH+ V +F P G
Sbjct: 539 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY---G 595
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
S D +LW+ D PL GH V+ +FHP+ ++ T D + RL
Sbjct: 596 YY--FVSGGHDRVARLWATDHYQPLRIFAGHLA-DVNCTRFHPNSNYVATGSADRTVRLW 652
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D N GH+ + + F P+GRFL T D LWD+ G V +GH
Sbjct: 653 DVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT 711
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWD 350
V + F DG ++A+G +D R+WD
Sbjct: 712 VCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 150 (57.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 37/119 (31%), Positives = 54/119 (45%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V F P +L + D + RLW L ++ +GH PV+ F G
Sbjct: 537 LYGHSG-PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG 595
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+GG D R+W + + GHL V F P+ ++ATGS D V++WD+
Sbjct: 596 YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 654
Score = 149 (57.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 45/175 (25%), Positives = 75/175 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ FSP + + + +LW + ++ F GH +V FHP +
Sbjct: 581 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY- 639
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+A+ + D +V+LW + + GH+ + + F P+GRFL T D W
Sbjct: 640 ----VATGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLW 694
Query: 267 RLDTPL--ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE 319
+ L L+GH V ++F G L + D++ RLWD + E L +
Sbjct: 695 DIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETD 748
Score = 147 (56.8 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 40/140 (28%), Positives = 63/140 (45%)
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+ D E+ GH PVY SF D + + + D R+W L+T C++ +GH
Sbjct: 524 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 583
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW---------CTQLLPNSIGVTSL 415
V+ FSP GY+ +G D ++W + L+ CT+ PNS V +
Sbjct: 584 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATG 643
Query: 416 LTDLYIDVLESLNPGIGNII 435
D + + + LN GN +
Sbjct: 644 SADRTVRLWDVLN---GNCV 660
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 271 (100.5 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 67/187 (35%), Positives = 98/187 (52%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD- 269
L S ++DG+V+LWSL T L +GH + V +F P G + + D W D
Sbjct: 558 LLSSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYFVSGGHDRVARLWATDH 616
Query: 270 -TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
PL GH V+ +FHP+ ++ T D + RLWD+ G V GH P++ +
Sbjct: 617 YQPLRIFAGHLA-DVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 675
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+F +G +ATG D +WD+ G + L+GH +V S+ FS DG LA+GS DN V
Sbjct: 676 TFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 735
Query: 389 KIWDLRK 395
++WD K
Sbjct: 736 RLWDAIK 742
Score = 235 (87.8 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 63/206 (30%), Positives = 97/206 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + P+ SFSPD ++ ++S G +LW++ + ++GH+ V +F P G
Sbjct: 541 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY---G 597
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
S D +LW+ D PL GH V+ +FHP+ ++ T D + RL
Sbjct: 598 YY--FVSGGHDRVARLWATDHYQPLRIFAGHLA-DVNCTRFHPNSNYVATGSADRTVRLW 654
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D N GH+ + + F P+GRFL T D LWD+ G V +GH
Sbjct: 655 DVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT 713
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWD 350
V + F DG ++A+G +D R+WD
Sbjct: 714 VCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 37/119 (31%), Positives = 54/119 (45%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V F P +L + D + RLW L ++ +GH PV+ F G
Sbjct: 539 LYGHSG-PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG 597
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+GG D R+W + + GHL V F P+ ++ATGS D V++WD+
Sbjct: 598 YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Score = 149 (57.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 45/175 (25%), Positives = 75/175 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ FSP + + + +LW + ++ F GH +V FHP +
Sbjct: 583 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY- 641
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+A+ + D +V+LW + + GH+ + + F P+GRFL T D W
Sbjct: 642 ----VATGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLW 696
Query: 267 RLDTPL--ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE 319
+ L L+GH V ++F G L + D++ RLWD + E L +
Sbjct: 697 DIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETD 750
Score = 147 (56.8 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 40/140 (28%), Positives = 63/140 (45%)
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+ D E+ GH PVY SF D + + + D R+W L+T C++ +GH
Sbjct: 526 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 585
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW---------CTQLLPNSIGVTSL 415
V+ FSP GY+ +G D ++W + L+ CT+ PNS V +
Sbjct: 586 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATG 645
Query: 416 LTDLYIDVLESLNPGIGNII 435
D + + + LN GN +
Sbjct: 646 SADRTVRLWDVLN---GNCV 662
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 271 (100.5 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 67/187 (35%), Positives = 98/187 (52%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD- 269
L S ++DG+V+LWSL T L +GH + V +F P G + + D W D
Sbjct: 558 LLSSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYFVSGGHDRVARLWATDH 616
Query: 270 -TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
PL GH V+ +FHP+ ++ T D + RLWD+ G V GH P++ +
Sbjct: 617 YQPLRIFAGHLA-DVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 675
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+F +G +ATG D +WD+ G + L+GH +V S+ FS DG LA+GS DN V
Sbjct: 676 TFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 735
Query: 389 KIWDLRK 395
++WD K
Sbjct: 736 RLWDAVK 742
Score = 235 (87.8 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 63/206 (30%), Positives = 97/206 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + P+ SFSPD ++ ++S G +LW++ + ++GH+ V +F P G
Sbjct: 541 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY---G 597
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
S D +LW+ D PL GH V+ +FHP+ ++ T D + RL
Sbjct: 598 YY--FVSGGHDRVARLWATDHYQPLRIFAGHLA-DVNCTRFHPNSNYVATGSADRTVRLW 654
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D N GH+ + + F P+GRFL T D LWD+ G V +GH
Sbjct: 655 DVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT 713
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWD 350
V + F DG ++A+G +D R+WD
Sbjct: 714 VCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 37/119 (31%), Positives = 54/119 (45%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V F P +L + D + RLW L ++ +GH PV+ F G
Sbjct: 539 LYGHSG-PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG 597
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+GG D R+W + + GHL V F P+ ++ATGS D V++WD+
Sbjct: 598 YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 656
Score = 147 (56.8 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 40/140 (28%), Positives = 63/140 (45%)
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+ D E+ GH PVY SF D + + + D R+W L+T C++ +GH
Sbjct: 526 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 585
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW---------CTQLLPNSIGVTSL 415
V+ FSP GY+ +G D ++W + L+ CT+ PNS V +
Sbjct: 586 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATG 645
Query: 416 LTDLYIDVLESLNPGIGNII 435
D + + + LN GN +
Sbjct: 646 SADRTVRLWDVLN---GNCV 662
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 271 (100.5 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 67/187 (35%), Positives = 98/187 (52%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD- 269
L S ++DG+V+LWSL T L +GH + V +F P G + + D W D
Sbjct: 559 LLSSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYFVSGGHDRVARLWATDH 617
Query: 270 -TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
PL GH V+ +FHP+ ++ T D + RLWD+ G V GH P++ +
Sbjct: 618 YQPLRIFAGHLA-DVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 676
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+F +G +ATG D +WD+ G + L+GH +V S+ FS DG LA+GS DN V
Sbjct: 677 TFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 736
Query: 389 KIWDLRK 395
++WD K
Sbjct: 737 RLWDAVK 743
Score = 235 (87.8 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 63/206 (30%), Positives = 97/206 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + P+ SFSPD ++ ++S G +LW++ + ++GH+ V +F P G
Sbjct: 542 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY---G 598
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
S D +LW+ D PL GH V+ +FHP+ ++ T D + RL
Sbjct: 599 YY--FVSGGHDRVARLWATDHYQPLRIFAGHLA-DVNCTRFHPNSNYVATGSADRTVRLW 655
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D N GH+ + + F P+GRFL T D LWD+ G V +GH
Sbjct: 656 DVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT 714
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWD 350
V + F DG ++A+G +D R+WD
Sbjct: 715 VCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 37/119 (31%), Positives = 54/119 (45%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V F P +L + D + RLW L ++ +GH PV+ F G
Sbjct: 540 LYGHSG-PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG 598
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+GG D R+W + + GHL V F P+ ++ATGS D V++WD+
Sbjct: 599 YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV 657
Score = 149 (57.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 45/175 (25%), Positives = 75/175 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ FSP + + + +LW + ++ F GH +V FHP +
Sbjct: 584 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY- 642
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+A+ + D +V+LW + + GH+ + + F P+GRFL T D W
Sbjct: 643 ----VATGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLW 697
Query: 267 RLDTPL--ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE 319
+ L L+GH V ++F G L + D++ RLWD + E L +
Sbjct: 698 DIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETD 751
Score = 147 (56.8 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 40/140 (28%), Positives = 63/140 (45%)
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+ D E+ GH PVY SF D + + + D R+W L+T C++ +GH
Sbjct: 527 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 586
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW---------CTQLLPNSIGVTSL 415
V+ FSP GY+ +G D ++W + L+ CT+ PNS V +
Sbjct: 587 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATG 646
Query: 416 LTDLYIDVLESLNPGIGNII 435
D + + + LN GN +
Sbjct: 647 SADRTVRLWDVLN---GNCV 663
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 257 (95.5 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 76/292 (26%), Positives = 138/292 (47%)
Query: 124 PEATRTARNQELQKHLTSL----SIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLW 179
P AT ++ + K S+ ++ + G T+ +S FSP+ + +A++S L K+W
Sbjct: 40 PGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIW 99
Query: 180 TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEG 239
+ + +T GH + + + S+ + L S + D ++K+W L L L+G
Sbjct: 100 GAYDGKFEKTISGHKLGISDVAWS---SDSRL--LVSGSDDKTLKVWELSTGKSLKTLKG 154
Query: 240 HEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGH-EPFRVSRIKFHPSGR 293
H + V F+P + + +D S W + T L L H +P VS + F+ G
Sbjct: 155 HSNY-VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP--VSAVHFNRDGS 211
Query: 294 FLGTCCWDHSWRLWDLNQGQ--EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
+ + +D R+WD GQ + L + + PV + F +G + LD ++WD
Sbjct: 212 LIVSSSYDGLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILAATLDNTLKLWDY 270
Query: 352 RTGRCIMFLEGHLKSVFSV--DFS-PDGYHLATGSEDNAVKIWDLRKRRLLK 400
G+C+ GH + + +FS G + +GSEDN V IW+L+ + +++
Sbjct: 271 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQ 322
Score = 251 (93.4 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 71/248 (28%), Positives = 112/248 (45%)
Query: 162 PDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221
P + + +S S L P L T GH V A++F P G LAS + D
Sbjct: 40 PGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSP---NGEW--LASSSADK 94
Query: 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT--PLANLE 276
+K+W + GH+ +S + + R L + D + W L T L L+
Sbjct: 95 LIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLK 153
Query: 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSV 336
GH + V F+P + + +D S R+WD+ G+ + H PV + F DGS+
Sbjct: 154 GHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSL 212
Query: 337 VATGGLDAFGRVWDLRTGRCIMFL-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
+ + D R+WD +G+C+ L + V V FSP+G ++ + DN +K+WD K
Sbjct: 213 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 272
Query: 396 RRLLKWCT 403
+ LK T
Sbjct: 273 GKCLKTYT 280
Score = 206 (77.6 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 63/248 (25%), Positives = 117/248 (47%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
IS ++S DS+ + + S K+W + + ++T +GH V F+P + +
Sbjct: 117 ISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSN-----LI 171
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP- 271
S + D SV++W + L L H +P VS + F+ G + + +D R+ DT
Sbjct: 172 VSGSFDESVRIWDVRTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTAS 229
Query: 272 ---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L L + VS +KF P+G+++ D++ +LWD ++G+ + GH YC+
Sbjct: 230 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 289
Query: 329 --SFQGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS-- 383
+F G + +G D +W+L++ + L+GH +V P +A+ +
Sbjct: 290 FANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALE 349
Query: 384 EDNAVKIW 391
D +K+W
Sbjct: 350 NDKTIKLW 357
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 270 (100.1 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 67/209 (32%), Positives = 107/209 (51%)
Query: 192 GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
GH V + F P + L S ++DG+++LWSL T L +GH + V +F
Sbjct: 497 GHSGPVYGVSFSPDRNY-----LLSSSEDGTIRLWSLQTFTCLVGYKGHN-YPVWDTQFS 550
Query: 252 PSGRFLGTCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 306
P G + + D W D PL GH V+ +FHP+ ++ T D + RL
Sbjct: 551 PFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLA-DVTCTRFHPNSNYVATGSSDRTVRL 609
Query: 307 WDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKS 366
WD+ G V GH P++ ++F +G +A+G D +WD+ G I L+GH +
Sbjct: 610 WDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGT 669
Query: 367 VFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
++++ FS DG +A+GS DN V++WD+ +
Sbjct: 670 IYALKFSRDGEIIASGSIDNTVRLWDVMR 698
Score = 241 (89.9 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 60/207 (28%), Positives = 99/207 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + P+ SFSPD ++ ++S G +LW++ + ++GH+ V +F P G
Sbjct: 497 GHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPF---G 553
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
S D +LW+ D PL GH V+ +FHP+ ++ T D + RL
Sbjct: 554 YY--FVSGGHDRVARLWATDHYQPLRIFAGHLA-DVTCTRFHPNSNYVATGSSDRTVRLW 610
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D N GH+ + + F P+G+FL + D LWD+ G + +GH
Sbjct: 611 DVLNGNCVRIFTGHKG-PIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGT 669
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDL 351
+Y + F DG ++A+G +D R+WD+
Sbjct: 670 IYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 151 (58.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 42/142 (29%), Positives = 67/142 (47%)
Query: 305 RLWDLNQGQE--VLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
R+ D E +LH GH PVY +SF D + + + D R+W L+T C++ +G
Sbjct: 482 RIMDEKTSSESKILH--GHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKG 539
Query: 363 HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK---------WCTQLLPNSIGVT 413
H V+ FSP GY+ +G D ++W + L+ CT+ PNS V
Sbjct: 540 HNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVA 599
Query: 414 SLLTDLYIDVLESLNPGIGNII 435
+ +D + + + LN GN +
Sbjct: 600 TGSSDRTVRLWDVLN---GNCV 618
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 264 (98.0 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 75/256 (29%), Positives = 117/256 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ SP+ + +ATASW LW + GH V +++F P G
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSP---HG 72
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LAS ++D +V+LW DK + + H V + F G+FL T D S W
Sbjct: 73 NL--LASASRDRTVRLWIPDKRGKFSEFKAHTA-PVRSVDFSADGQFLATASEDKSIKVW 129
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGK 323
+ L +L H + V KF P GR + +C D + ++WD Q V + + G
Sbjct: 130 SMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
+ + F G+ +A+ G D +VWD+R + + + H V + F P +L T S
Sbjct: 189 ANF-VDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTAS 247
Query: 384 EDNAVKIWDLRKRRLL 399
D +KI DL + RL+
Sbjct: 248 SDGTLKILDLLEGRLI 263
Score = 262 (97.3 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 71/248 (28%), Positives = 119/248 (47%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG ++ FSP +A+AS +LW + F+ H V +++F ++
Sbjct: 57 VGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFS---AD 113
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G LA+ ++D S+K+WS+ + L +L H + V KF P GR + +C D + ++
Sbjct: 114 GQF--LATASEDKSIKVWSMYRQRFLYSLYRHTHW-VRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 269 -DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
DT + N F + + F+PSG + + D + ++WD+ + + H + H
Sbjct: 171 WDTTNKQCVNNFSDSVGF-ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG 229
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V C+SF + + T D ++ DL GR I L+GH VF+V FS G A+G
Sbjct: 230 GVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGG 289
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 290 ADTQVLLW 297
Score = 211 (79.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 56/220 (25%), Positives = 97/220 (44%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH + +++ P G LA+ + D + LW+ GH+ V
Sbjct: 10 LERYFKGHKAAITSLDLSP---NGK--QLATASWDTFLMLWNFKPHARAYRYVGHKDV-V 63
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTP-----LANLEGHEPFRVSRIKFHPSGRFLGTCCW 300
+ ++F P G L + D + RL P + + H V + F G+FL T
Sbjct: 64 TSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA-PVRSVDFSADGQFLATASE 122
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D S ++W + + + + H V C F DG ++ + D ++WD +C+
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNF 182
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ VDF+P G +A+ D VK+WD+R +LL+
Sbjct: 183 SDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 222
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 51/175 (29%), Positives = 81/175 (46%)
Query: 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS 335
+GH+ ++ + P+G+ L T WD LW+ GH V + F G+
Sbjct: 15 KGHKA-AITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 336 VVATGGLDAFGRVW--DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
++A+ D R+W D R G+ F + H V SVDFS DG LAT SED ++K+W +
Sbjct: 74 LLASASRDRTVRLWIPDKR-GKFSEF-KAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 394 RKRRLL-------KW--CTQLLPNSIGVTSLLTDLYIDVLESLNPGIGNIISSAL 439
++R L W C + P+ + S D I + ++ N N S ++
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSV 186
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 245 (91.3 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 69/262 (26%), Positives = 125/262 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ +S FSP+ + +A++S L K+W + + +T GH + + + S+
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS---SDS 99
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ L S + D ++K+W + L L+GH + V F+P + + +D S W
Sbjct: 100 NL--LVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 267 RLDTP--LANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ--EVLHQEGH 321
+ T L L H +P VS + F+ G + + +D R+WD GQ + L + +
Sbjct: 157 DVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 214
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV--DFS-PDGYH 378
PV + F +G + LD ++WD G+C+ H + + +FS G
Sbjct: 215 -PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKW 273
Query: 379 LATGSEDNAVKIWDLRKRRLLK 400
+ +GSEDN V IW+L+ + +++
Sbjct: 274 IVSGSEDNLVYIWNLQTKEVVQ 295
Score = 231 (86.4 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 63/228 (27%), Positives = 104/228 (45%)
Query: 182 PECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
P L T GH V +++F P G LAS + D +K+W + GH+
Sbjct: 33 PNYTLKFTLAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHK 87
Query: 242 PFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLG 296
+S + + L + D + W + + L L+GH + V F+P +
Sbjct: 88 -LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIV 145
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ +D S R+WD+ G+ + H PV + F DGS++ + D R+WD +G+C
Sbjct: 146 SGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 357 IMFL-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
+ L + V V FSP+G ++ + DN +K+WD K + LK T
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 213 (80.0 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 66/248 (26%), Positives = 116/248 (46%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
IS ++S DS + +AS K+W V + ++T +GH V F+P + +
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-----LI 144
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP- 271
S + D SV++W + L L H +P VS + F+ G + + +D R+ DT
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 272 ---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L L + VS +KF P+G+++ D++ +LWD ++G+ + H YC+
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCI 262
Query: 329 --SFQGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS-- 383
+F G + +G D +W+L+T + L+GH V S P +A+ +
Sbjct: 263 FANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 384 EDNAVKIW 391
D +K+W
Sbjct: 323 NDKTIKLW 330
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 268 (99.4 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 66/187 (35%), Positives = 98/187 (52%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD- 269
L S ++DG+V+LWSL T L +GH + V +F P G + + D W D
Sbjct: 559 LLSSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYFVSGGHDRVARLWATDH 617
Query: 270 -TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
PL GH V+ ++HP+ ++ T D + RLWD+ G V GH P++ +
Sbjct: 618 YQPLRIFAGHLA-DVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 676
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+F +G +ATG D +WD+ G + L+GH +V S+ FS DG LA+GS DN V
Sbjct: 677 TFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 736
Query: 389 KIWDLRK 395
++WD K
Sbjct: 737 RLWDAVK 743
Score = 232 (86.7 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 62/206 (30%), Positives = 97/206 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + P+ SFSPD ++ ++S G +LW++ + ++GH+ V +F P G
Sbjct: 542 GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPY---G 598
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL- 268
S D +LW+ D PL GH V+ ++HP+ ++ T D + RL
Sbjct: 599 YY--FVSGGHDRVARLWATDHYQPLRIFAGHLA-DVNCTRYHPNSNYVATGSADRTVRLW 655
Query: 269 DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D N GH+ + + F P+GRFL T D LWD+ G V +GH
Sbjct: 656 DVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT 714
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWD 350
V + F DG ++A+G +D R+WD
Sbjct: 715 VCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 147 (56.8 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 36/119 (30%), Positives = 54/119 (45%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V F P +L + D + RLW L ++ +GH PV+ F G
Sbjct: 540 LYGHSG-PVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG 598
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+GG D R+W + + GHL V + P+ ++ATGS D V++WD+
Sbjct: 599 YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDV 657
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 40/140 (28%), Positives = 63/140 (45%)
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R+ D E+ GH PVY SF D + + + D R+W L+T C++ +GH
Sbjct: 527 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHN 586
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW---------CTQLLPNSIGVTSL 415
V+ FSP GY+ +G D ++W + L+ CT+ PNS V +
Sbjct: 587 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATG 646
Query: 416 LTDLYIDVLESLNPGIGNII 435
D + + + LN GN +
Sbjct: 647 SADRTVRLWDVLN---GNCV 663
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 44/175 (25%), Positives = 75/175 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ FSP + + + +LW + ++ F GH +V +HP +
Sbjct: 584 GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNY- 642
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+A+ + D +V+LW + + GH+ + + F P+GRFL T D W
Sbjct: 643 ----VATGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLW 697
Query: 267 RLDTPL--ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE 319
+ L L+GH V ++F G L + D++ RLWD + E L +
Sbjct: 698 DIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETD 751
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 256 (95.2 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 65/229 (28%), Positives = 112/229 (48%)
Query: 180 TVPEC--ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
T+P +L+ T GH ++ A++F P G L + + D +VK+W++ + L
Sbjct: 63 TIPGAGYKLISTIEGHTKSISAVKFSPC---GKF--LGTSSADKTVKIWNMSDLSCERTL 117
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLAN----LEGHEPFRVSRIKFHPSG 292
GH+ V+ + + + T D + ++ + P L+GH + V F+P
Sbjct: 118 TGHK-LGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNY-VFCCNFNPQS 175
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
+ + +D S R+WD+ G V H PV +SF DGS++ +G D R+WD
Sbjct: 176 SLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTA 235
Query: 353 TGRCIMFL-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
G+C+ L + V V FSP+G ++ + + DN +K+WD K + LK
Sbjct: 236 NGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLK 284
Score = 251 (93.4 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 72/265 (27%), Positives = 132/265 (49%)
Query: 138 HLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNV 197
+++ LS + G ++ ++S DS+ + TAS K++ VP ++ +T +GH V
Sbjct: 107 NMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYV 166
Query: 198 GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRF 256
F+P S + S + D SV++W + + L H +P VS + F+ G
Sbjct: 167 FCCNFNPQSS-----LVVSGSFDESVRIWDVRTGMCVKTLPAHSDP--VSAVSFNRDGSL 219
Query: 257 LGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ 311
+ + +D R+ DT + L E V+ +KF P+G+++ + D++ +LWD +
Sbjct: 220 ITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGK 279
Query: 312 GQEVLHQEGHGKPVYCM--SFQGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVF 368
G+ + +GH YC+ +F G + +G D VW+L+T + LEGH ++V
Sbjct: 280 GKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVI 339
Query: 369 SVDFSPDGYHLATGS--EDNAVKIW 391
+ D P +A+G+ DN ++IW
Sbjct: 340 ASDCHPMQNMIASGALEPDNTIRIW 364
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 265 (98.3 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 68/213 (31%), Positives = 100/213 (46%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
++T RGH V F S L SC++D +V+ W L T GH + V
Sbjct: 347 IKTLRGHSGPVYRTAFLTDAS-----GLLSCSEDSTVRYWDLKSFTNTVLYRGHA-YPVW 400
Query: 247 RIKFHPSGRFLGTCCWDHSWRLDT-----PLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301
+ P + T D + RL + PL GH V +KFHP+ ++ T D
Sbjct: 401 DVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLS-DVDCVKFHPNSNYIATGSTD 459
Query: 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
+ RLW QG V GH PV ++F +G +A+ G D ++WDL +G L
Sbjct: 460 KTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLR 519
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
GH ++ S+ FS D +A+ S DN V++WD+R
Sbjct: 520 GHTDTISSLSFSQDSSLVASASMDNTVRVWDIR 552
Score = 209 (78.6 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 58/210 (27%), Positives = 93/210 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + P+ +F D+ + + S + W + +RGH V ++ P
Sbjct: 352 GHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSP----- 406
Query: 210 AVCSL--ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-- 265
CSL ++ + D + +LWS + PL GH V +KFHP+ ++ T D +
Sbjct: 407 --CSLYFSTASHDRTARLWSFARTYPLRLYAGHLS-DVDCVKFHPNSNYIATGSTDKTVR 463
Query: 266 -W--RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322
W R + GH V + F P+G++L + D +LWDL G GH
Sbjct: 464 LWSTRQGASVRLFTGHRG-PVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHT 522
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
+ +SF D S+VA+ +D RVWD+R
Sbjct: 523 DTISSLSFSQDSSLVASASMDNTVRVWDIR 552
Score = 189 (71.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 51/172 (29%), Positives = 73/172 (42%)
Query: 234 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD--TPLANLEGHEPFRVSRIKF 288
+ L GH V R F L +C D + W L T GH + V +
Sbjct: 347 IKTLRGHSG-PVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHA-YPVWDVDV 404
Query: 289 HPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRV 348
P + T D + RLW + + GH V C+ F + + +ATG D R+
Sbjct: 405 SPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRL 464
Query: 349 WDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
W R G + GH V ++ FSP+G +LA+ ED +K+WDL L K
Sbjct: 465 WSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFK 516
Score = 149 (57.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 51/182 (28%), Positives = 73/182 (40%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA 273
LA+ + +VKLWSL A G VS+I+ + L D + +
Sbjct: 295 LAAGFDNSAVKLWSLRARKLKA---GPHKADVSKIRL--ACDVLEEEADDED-ASGSEIK 348
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
L GH V R F L +C D + R WDL + GH PV+ +
Sbjct: 349 TLRGHSG-PVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPC 407
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+T D R+W + GHL V V F P+ ++ATGS D V++W
Sbjct: 408 SLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWST 467
Query: 394 RK 395
R+
Sbjct: 468 RQ 469
Score = 147 (56.8 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 47/186 (25%), Positives = 84/186 (45%)
Query: 129 TARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ 188
T R +L K T+ +Y G P+ SP S + +TAS +LW+ ++
Sbjct: 377 TVRYWDL-KSFTNTVLYR---GHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLR 432
Query: 189 TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRI 248
+ GH +V ++FHP + +A+ + D +V+LWS + + GH V +
Sbjct: 433 LYAGHLSDVDCVKFHPNSNY-----IATGSTDKTVRLWSTRQGASVRLFTGHRG-PVLTL 486
Query: 249 KFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 303
F P+G++L + D W L + +L GH +S + F + + D++
Sbjct: 487 AFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTD-TISSLSFSQDSSLVASASMDNT 545
Query: 304 WRLWDL 309
R+WD+
Sbjct: 546 VRVWDI 551
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 243 (90.6 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 71/248 (28%), Positives = 115/248 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPSE 208
G ++ +FSP +A+ S ++W VP + T FR H V ++ F S+
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC---SD 114
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G + L + + D +VK+WS + L +L H + V KF P GR + + D + +L
Sbjct: 115 GQL--LVTASDDKTVKVWSTHRQRFLFSLTQHINW-VRCAKFSPDGRLIVSASDDKTVKL 171
Query: 269 --DTPLANLEG---HEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
T + H F V+ + FHPSG + D++ ++WD + V H + H
Sbjct: 172 WDKTSRECVHSYCEHGGF-VTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSA 230
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V +SF G+ + T D+ ++ DL GR + L GH +V FS G + A+G
Sbjct: 231 AVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 291 SDEQVMVW 298
Score = 237 (88.5 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 73/256 (28%), Positives = 115/256 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G ++ FS +++H+A+ S +W + F GH V + F P G
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP---SG 73
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LAS ++D +V++W + H V + F G+ L T D + W
Sbjct: 74 HL--LASGSRDKTVRIWVPNVKGESTVFRAHTA-TVRSVHFCSDGQLLVTASDDKTVKVW 130
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GHGK 323
L +L H + V KF P GR + + D + +LWD +E +H HG
Sbjct: 131 STHRQRFLFSLTQHINW-VRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGG 188
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V + F G+ +A G+D +VWD RT R + + H +V ++ F P G +L T S
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITAS 248
Query: 384 EDNAVKIWDLRKRRLL 399
D+ +KI DL + RLL
Sbjct: 249 SDSTLKILDLMEGRLL 264
Score = 208 (78.3 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 61/221 (27%), Positives = 101/221 (45%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH V ++F L ++ LAS + D ++ +W + + GH+ V
Sbjct: 11 LERHFKGHRDAVTCVDFS-LNTK----HLASGSMDSTLMIWHMKPQSRAYRFTGHKD-AV 64
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEP-FR-----VSRIKFHPSGRFLGTCC 299
+ + F PSG L + D + R+ P N++G FR V + F G+ L T
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVP--NVKGESTVFRAHTATVRSVHFCSDGQLLVTAS 122
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + ++W ++ + + H V C F DG ++ + D ++WD + C+
Sbjct: 123 DDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 182
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
H V VDF P G +A DN VK+WD R RL++
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQ 223
Score = 154 (59.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
+ +GH V+ + F + + L + D + +W + GH V C++F
Sbjct: 14 HFKGHRD-AVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 334 GSVVATGGLDAFGRVWDLRT-GRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
G ++A+G D R+W G +F H +V SV F DG L T S+D VK+W
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVF-RAHTATVRSVHFCSDGQLLVTASDDKTVKVWS 131
Query: 393 LRKRRLLKWCTQ 404
++R L TQ
Sbjct: 132 THRQRFLFSLTQ 143
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 265 (98.3 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 82/274 (29%), Positives = 129/274 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G R +S FSPD+ +A+ G K+W +L+ TF GH + I + P +G
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSP---DG 230
Query: 210 AVCSLASCAQDGSVKLWSL--DKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-- 265
A ++AS + D +++LW++ K P + GH + V I F P G L + +D +
Sbjct: 231 A--TIASGSDDKTIRLWNVLTGKAHPTPFI-GHHNY-VYAIAFSPKGNMLVSGSYDEAVF 286
Query: 266 -W--RLDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ---EVLHQ 318
W R + +L H +P VS I G + +C D R+WD + GQ ++H+
Sbjct: 287 LWDVRSARVMKSLPAHSDP--VSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHE 344
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH------LKSVF---- 368
+ PV + F +G V LD R+WD GRC+ +GH L F
Sbjct: 345 DN--PPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYG 402
Query: 369 -SVDFSPDGYHLA-TGSEDNAVKIWDLRKRRLLK 400
S+ GY A +GSED A+ WD+ +++L+
Sbjct: 403 QSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQ 436
Score = 234 (87.4 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 67/218 (30%), Positives = 104/218 (47%)
Query: 191 RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKF 250
RGH V A+ F P S +AS DG+VK+W+ + EGH +S I +
Sbjct: 173 RGHLRGVSAVRFSPDAS-----MIASGGADGAVKVWAASTGKLIYTFEGHLA-GISTISW 226
Query: 251 HPSGRFLGTCCWDHS---WRLDTPLAN---LEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304
P G + + D + W + T A+ GH + V I F P G L + +D +
Sbjct: 227 SPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNY-VYAIAFSPKGNMLVSGSYDEAV 285
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
LWD+ + + H PV + DG+++A+ D R+WD TG+C+ L H
Sbjct: 286 FLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLV-HE 344
Query: 365 KS--VFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ V SV FSP+G ++ + D+ V++WD + R LK
Sbjct: 345 DNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLK 382
Score = 167 (63.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 31/85 (36%), Positives = 53/85 (62%)
Query: 309 LNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVF 368
+N Q+ L + GH + V + F D S++A+GG D +VW TG+ I EGHL +
Sbjct: 164 VNYRQKFLLR-GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGIS 222
Query: 369 SVDFSPDGYHLATGSEDNAVKIWDL 393
++ +SPDG +A+GS+D +++W++
Sbjct: 223 TISWSPDGATIASGSDDKTIRLWNV 247
Score = 160 (61.4 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 49/173 (28%), Positives = 80/173 (46%)
Query: 237 LEGHEPFR-VSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHP 290
L GH R VS ++F P + + D + W T + EGH +S I + P
Sbjct: 172 LRGH--LRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLA-GISTISWSP 228
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQE---GHGKPVYCMSFQGDGSVVATGGLDAFGR 347
G + + D + RLW++ G+ H GH VY ++F G+++ +G D
Sbjct: 229 DGATIASGSDDKTIRLWNVLTGKA--HPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVF 286
Query: 348 VWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+WD+R+ R + L H V +D DG +A+ + D V+IWD + L+
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLR 339
Score = 150 (57.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 73/273 (26%), Positives = 113/273 (41%)
Query: 140 TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVG 198
T IY + G IS S+SPD +A+ S +LW V + T F GH V
Sbjct: 207 TGKLIYTFE-GHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVY 265
Query: 199 AIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSG-RF 256
AI F P +G + L S + D +V LW + + +L H +P + + +
Sbjct: 266 AIAFSP---KGNM--LVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIAS 320
Query: 257 LGTCCWDHSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE 314
T W T L L + VS +KF P+G+++ D RLWD +G+
Sbjct: 321 CATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRC 380
Query: 315 VLHQEGHGKP---------VYCMSFQG--DGSVVATGGLDAFGRV--WDLRTGRCIMFLE 361
+ +GH VY S G G A G + G + WD+ T + + +E
Sbjct: 381 LKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSED-GAILCWDVVTKKVLQRIE 439
Query: 362 GHLKSVFSVDF--SPDGYHLATGSEDNAVKIWD 392
H V VD + +G + + D V++W+
Sbjct: 440 AHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 37 (18.1 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 19 GSLEEQERKRLAAN 32
GS +QER+R++ N
Sbjct: 31 GSDHDQERRRVSLN 44
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 241 (89.9 bits), Expect = 8.4e-20, P = 8.4e-20
Identities = 69/256 (26%), Positives = 125/256 (48%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G IS +FS D++ + +AS KLW V L++T GH + F+P +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN-- 126
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
+ S + D +V++W + L L H +P V+ + F+ G + + +D R+
Sbjct: 127 ---MIVSGSFDETVRIWDVTTGKCLKVLPAHSDP--VTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 269 -DTPLAN-----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322
D+ + ++ P VS ++F P+G+F+ D++ RLW+++ + + GH
Sbjct: 182 WDSGTGHCVKTLIDDENP-PVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHV 240
Query: 323 KPVYCMS--FQ-GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379
YC+S F +G + +G D +W+L + + + LEGH ++V +V P +
Sbjct: 241 NAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLI 300
Query: 380 ATGSEDNAVKIWDLRK 395
A+GS D V+IW +K
Sbjct: 301 ASGSLDKTVRIWTQKK 316
Score = 236 (88.1 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 61/227 (26%), Positives = 112/227 (49%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDK-DTPLAN----LEGHEP 242
QT H+ V +++F S+G + LAS + D +++ ++++ + P+A GHE
Sbjct: 18 QTLTSHNRAVSSVKFS---SDGRL--LASASADKTIRTYTINTINDPIAEPVQEFTGHEN 72
Query: 243 FRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGT 297
+S + F RF+ + D + W ++T + L GH + + F+P + +
Sbjct: 73 -GISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC-VNFNPQSNMIVS 130
Query: 298 CCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI 357
+D + R+WD+ G+ + H PV + F DGS++ + D R+WD TG C+
Sbjct: 131 GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV 190
Query: 358 MFL-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
L + V V FSP+G + G+ DN +++W++ + LK T
Sbjct: 191 KTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYT 237
Score = 234 (87.4 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 68/263 (25%), Positives = 125/263 (47%)
Query: 153 RPISYCSFSPDSQHVATASWSGLCKLWTV-----PECELVQTFRGHDCNVGAIEFHPLPS 207
R +S FS D + +A+AS + +T+ P E VQ F GH+ + + F S
Sbjct: 25 RAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFS---S 81
Query: 208 EGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-- 265
+ + S + D ++KLW ++ + + L GH + + F+P + + +D +
Sbjct: 82 DARF--IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC-VNFNPQSNMIVSGSFDETVR 138
Query: 266 -WRLDTP--LANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EG 320
W + T L L H +P V+ + F+ G + + +D R+WD G V +
Sbjct: 139 IWDVTTGKCLKVLPAHSDP--VTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDD 196
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD--FS-PDGY 377
PV + F +G + G LD R+W++ + + + GH+ + + + FS +G
Sbjct: 197 ENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGK 256
Query: 378 HLATGSEDNAVKIWDLRKRRLLK 400
+ +GSEDN V +W+L ++LL+
Sbjct: 257 RIVSGSEDNCVHMWELNSKKLLQ 279
Score = 158 (60.7 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 48/215 (22%), Positives = 102/215 (47%)
Query: 143 SIYCSQVGDTRPISYC-SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIE 201
S+ + +G T ++C +F+P S + + S+ ++W V + ++ H V A++
Sbjct: 104 SLIKTLIGHTN-YAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVD 162
Query: 202 FHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC 261
F+ +G++ + S + DG ++W + L E VS ++F P+G+F+
Sbjct: 163 FN---RDGSL--IVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGT 217
Query: 262 WDHS---WRLDTP--LANLEGH--EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE 314
D++ W + + L GH + +S +G+ + + D+ +W+LN +
Sbjct: 218 LDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKL 277
Query: 315 VLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
+ EGH + V ++ +++A+G LD R+W
Sbjct: 278 LQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 263 (97.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 68/218 (31%), Positives = 109/218 (50%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
+Q H NV ++ S G + LA+ +D V +W++ K + +L GH V
Sbjct: 13 LQEIVAHSSNVSSLVLGK--SSGRL--LATGGEDCRVNIWAVSKPNCIMSLTGHTS-AVG 67
Query: 247 RIKFHPSGRFL--GTCCWD-HSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301
I+F+ S + G+ W L+ L L GH+ +S + FHP G +L + D
Sbjct: 68 CIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKA-SISSLDFHPMGEYLASGSVD 126
Query: 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
+ +LWD+ + V +GH + V C++F DG +A+ D+ ++WDL G+ I
Sbjct: 127 SNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFT 186
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
H +V V F P+ Y LA+GS D VK+WDL K ++
Sbjct: 187 SHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMI 224
Score = 235 (87.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 67/230 (29%), Positives = 107/230 (46%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+AT +W V + + + GH VG I+F+ SL+ GS++LW
Sbjct: 36 LATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLS-----GSLRLW 90
Query: 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPF 281
L+ L L GH+ +S + FHP G +L + D + W R + +GH
Sbjct: 91 DLEAAKILRTLMGHKA-SISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQ- 148
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
V + F P G++L + D + +LWDL G+ + H V + F + ++A+G
Sbjct: 149 AVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGS 208
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
D ++WDL I EG V SV F+PDG L +GSE N ++++
Sbjct: 209 ADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSE-NTLRVY 257
Score = 210 (79.0 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 57/215 (26%), Positives = 99/215 (46%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T + F+ + V S SG +LW + ++++T GH ++ +++FHP+
Sbjct: 58 SLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPM- 116
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
G LAS + D ++KLW + + + +GH V + F P G++L + D +
Sbjct: 117 --GEY--LASGSVDSNIKLWDVRRKGCVFRYKGHTQ-AVRCLAFSPDGKWLASASDDSTV 171
Query: 266 --WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
W L + H V+ ++FHP+ L + D + +LWDL + + EG
Sbjct: 172 KLWDLIAGKMITEFTSHTS-AVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGE 230
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
V + F DGS + +G + RV+ RC
Sbjct: 231 TGVVRSVLFNPDGSCLYSGSENTL-RVYGWEPDRC 264
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/192 (27%), Positives = 88/192 (45%)
Query: 139 LTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVG 198
L + I + +G IS F P +++A+ S KLW V V ++GH V
Sbjct: 92 LEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVR 151
Query: 199 AIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLG 258
+ F P +G LAS + D +VKLW L + H V+ ++FHP+ L
Sbjct: 152 CLAFSP---DGKW--LASASDDSTVKLWDLIAGKMITEFTSHTS-AVNVVQFHPNEYLLA 205
Query: 259 TCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL--WDLNQ 311
+ D + W L+ + + EG E V + F+P G L + +++ R+ W+ ++
Sbjct: 206 SGSADRTVKLWDLEKFNMIGSSEG-ETGVVRSVLFNPDGSCLYSGS-ENTLRVYGWEPDR 263
Query: 312 GQEVLHQEGHGK 323
+V+H G GK
Sbjct: 264 CFDVVHV-GWGK 274
Score = 119 (46.9 bits), Expect = 0.00085, P = 0.00085
Identities = 31/114 (27%), Positives = 55/114 (48%)
Query: 303 SWRLWDLNQGQEVLHQEGHGKPVYCMSF-QGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
SW+L QE++ H V + + G ++ATGG D +W + CIM L
Sbjct: 10 SWKL------QEIV---AHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLT 60
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
GH +V + F+ + GS ++++WDL ++L+ L+ + ++SL
Sbjct: 61 GHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILR---TLMGHKASISSL 111
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 240 (89.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 71/253 (28%), Positives = 115/253 (45%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVGAIEFH 203
YC VG + FSP VA+ S LW VP + T F+ H V ++ F
Sbjct: 56 YCL-VGHKDAVMCVQFSPSGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFS 113
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
S+G SL + + D ++K+W++ + L +L H + V +F P GR + + D
Sbjct: 114 ---SDGQ--SLVTASDDKTIKVWTVHRQKFLFSLSQHINW-VRCARFSPDGRLIASASDD 167
Query: 264 HSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
+ +L D + + H F + ++FHPSG + D + ++WD+ + + H
Sbjct: 168 KTVKLWDKTSRECIHSFCEHGGF-ANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHY 226
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
+ H V +SF G+ + T D+ ++ DL GR + L GH V FS G
Sbjct: 227 QVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDF 286
Query: 379 LATGSEDNAVKIW 391
A+G D V +W
Sbjct: 287 FASGGSDEQVMVW 299
Score = 220 (82.5 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 71/256 (27%), Positives = 113/256 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ FS + + +A+ S K+W++ GH V ++F P G
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSP---SG 74
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ +AS ++D +V LW + H V + F G+ L T D + W
Sbjct: 75 HL--VASGSRDKTVCLWVPSVKGESTVFKAHTA-TVRSVHFSSDGQSLVTASDDKTIKVW 131
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GHGK 323
+ L +L H + V +F P GR + + D + +LWD +E +H HG
Sbjct: 132 TVHRQKFLFSLSQHINW-VRCARFSPDGRLIASASDDKTVKLWD-KTSRECIHSFCEHGG 189
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
+ F G+ +A G D +VWD+R R + + H +V S+ F P G +L T S
Sbjct: 190 FANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITAS 249
Query: 384 EDNAVKIWDLRKRRLL 399
D+ +KI DL + RLL
Sbjct: 250 NDSTLKILDLLEGRLL 265
Score = 202 (76.2 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 62/223 (27%), Positives = 103/223 (46%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + FRGH + +++F L + LAS + D +K+WS+ L GH+ V
Sbjct: 12 LERHFRGHRDAITSVDFS-LNKK----QLASGSMDSCLKIWSMKPQMRAYCLVGHKD-AV 65
Query: 246 SRIKFHPSGRFLGT-------CCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTC 298
++F PSG + + C W S + ++ + + H V + F G+ L T
Sbjct: 66 MCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTV--FKAHTA-TVRSVHFSSDGQSLVTA 122
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI- 357
D + ++W +++ + + H V C F DG ++A+ D ++WD + CI
Sbjct: 123 SDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIH 182
Query: 358 MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
F E H V+F P G +A D VK+WD+R RLL+
Sbjct: 183 SFCE-HGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQ 224
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 262 (97.3 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 85/266 (31%), Positives = 121/266 (45%)
Query: 135 LQKHLTSLSIYCSQV-GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGH 193
LQ + ++L +Q G R + SFS DS+ +A+AS G K+W L T GH
Sbjct: 245 LQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGH 304
Query: 194 DCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPS 253
+ V ++ F + + LAS + DG+VK+W T L+GH V + F
Sbjct: 305 NEWVKSVVFS---HDSRL--LASASDDGTVKIWDTATGTLQRMLKGHND-SVRSVVFSHD 358
Query: 254 GRFLGTCCWDHS---WRLDTPLAN--LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWD 308
R + + D + W T L E HE V + F R L + + ++WD
Sbjct: 359 SRLIASGSNDRTVRIWETTTGLLRHTFEDHED-SVMAVSFAHDSRRLASASDGGNVKIWD 417
Query: 309 LNQG--QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKS 366
G Q VL EGH V +SF D ++A+ D ++W TG LEGH
Sbjct: 418 TRTGSLQNVL--EGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDW 475
Query: 367 VFSVDFSPDGYHLATGSEDNAVKIWD 392
V SV FS D +A+ S+D VKIWD
Sbjct: 476 VRSVVFSHDSRLIASASDDMTVKIWD 501
Score = 251 (93.4 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 77/239 (32%), Positives = 110/239 (46%)
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEF-HPLPSEGAVCSLASCA 218
FS DS+ +A+ S ++W L TF H+ +V A+ F H S LAS +
Sbjct: 355 FSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHD--SR----RLASAS 408
Query: 219 QDGSVKLWSLDKDTPLAN-LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLAN 274
G+VK+W + L N LEGH+ V+ + F P R L + D + W T
Sbjct: 409 DGGNVKIWDT-RTGSLQNVLEGHDDC-VNSVSFSPDSRLLASASDDRTVKIWHAATGSLQ 466
Query: 275 --LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
LEGH + V + F R + + D + ++WD + E H V + F
Sbjct: 467 RTLEGHNDW-VRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSH 525
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
D ++A+ D ++WD TG LEGH V SV FSPD LA+ S+D VKIW
Sbjct: 526 DSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 247 (92.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 72/240 (30%), Positives = 111/240 (46%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
SF+ DS+ +A+AS G K+W L GHD V ++ F P + + LAS +
Sbjct: 396 SFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSP---DSRL--LASAS 450
Query: 219 QDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DT---PLAN 274
D +VK+W + LEGH + V + F R + + D + ++ DT PL N
Sbjct: 451 DDRTVKIWHAATGSLQRTLEGHNDW-VRSVVFSHDSRLIASASDDMTVKIWDTATVPLQN 509
Query: 275 -LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
LE H+ + V + F R L + D + ++WD G EGH V +SF D
Sbjct: 510 NLESHDNW-VRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPD 568
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
++A+ D ++W TG +G + S+ FS LA+ +D VKIWD+
Sbjct: 569 SRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDM 628
Score = 226 (84.6 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 73/238 (30%), Positives = 107/238 (44%)
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ 219
FS DS+ +A+AS G K+W L + +GH+ +V ++ F + + +AS +
Sbjct: 313 FSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS---HDSRL--IASGSN 367
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKF-HPSGRFLGTCCWDHS--WRLDT-PLAN- 274
D +V++W E HE V + F H S R + W T L N
Sbjct: 368 DRTVRIWETTTGLLRHTFEDHED-SVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNV 426
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
LEGH+ V+ + F P R L + D + ++W G EGH V + F D
Sbjct: 427 LEGHDDC-VNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDS 485
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
++A+ D ++WD T LE H V SV FS D LA+ S+D VKIWD
Sbjct: 486 RLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWD 543
Score = 188 (71.2 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 52/165 (31%), Positives = 76/165 (46%)
Query: 235 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP---LAN-LEGHEPFRVSRIKFH 289
A +GH+ V + F R L + D + ++ DT L N LEGH + V + F
Sbjct: 257 AQFKGHDR-AVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEW-VKSVVFS 314
Query: 290 PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
R L + D + ++WD G +GH V + F D ++A+G D R+W
Sbjct: 315 HDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIW 374
Query: 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ TG E H SV +V F+ D LA+ S+ VKIWD R
Sbjct: 375 ETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTR 419
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 233 (87.1 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 63/243 (25%), Positives = 114/243 (46%)
Query: 164 SQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221
S+ + T S L K+W + + EL T GH V ++ + GA+ AS + D
Sbjct: 32 SETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVN---ISQNGAIA--ASSSLDA 86
Query: 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-------PLAN 274
++LW L+ + +++ P + F P +++ T H +++ +
Sbjct: 87 HIRLWDLETGKQIKSMDAG-PVDAWTVAFSPDSKYIAT--GSHLGKVNIFGVESGKKEHS 143
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGD 333
L+ F +S I + P G++L + D ++D+ G+ +LH EGH P+ ++F D
Sbjct: 144 LDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPD 201
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
++ T D + +++D++ L GH V SV FSPD H + S D ++K+WD
Sbjct: 202 SQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDT 261
Query: 394 RKR 396
R
Sbjct: 262 SSR 264
Score = 183 (69.5 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 50/186 (26%), Positives = 90/186 (48%)
Query: 220 DGSVKLWSL-DKDTPLA-NLEGHEPFRVSRIKFHPSGRFLGTCCWD-HS--WRLDT--PL 272
D VK+W D+ L LEGH+ VS + +G + D H W L+T +
Sbjct: 41 DDLVKVWKWSDEKLELQWTLEGHQLGVVS-VNISQNGAIAASSSLDAHIRLWDLETGKQI 99
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
+++ P + F P +++ T ++ + G++ + GK + +++
Sbjct: 100 KSMDAG-PVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSP 158
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
DG +A+G +D ++D+ TG+ + LEGH + S+ FSPD L T S+D +KI+D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 393 LRKRRL 398
++ L
Sbjct: 219 VQHANL 224
Score = 159 (61.0 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 57/238 (23%), Positives = 106/238 (44%)
Query: 164 SQHVATASWSGL---CKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
SQ+ A A+ S L +LW + + +++ + + F P S+ +A+ +
Sbjct: 73 SQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSP-DSK----YIATGSHL 127
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTP--LANL 275
G V ++ ++ +L+ F +S I + P G++L + D + + + T L L
Sbjct: 128 GKVNIFGVESGKKEHSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTL 186
Query: 276 EGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
EGH P R + F P + L T D +++D+ GHG V ++F D
Sbjct: 187 EGHAMPIR--SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDD 244
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
+ + D +VWD + C+ H V+SV ++P G + + +D A+ I+D
Sbjct: 245 THFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
LEGH+ VS + +G + D RLWDL G+++ + + ++F D
Sbjct: 60 LEGHQLGVVS-VNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDS 118
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ATG ++ + +G+ L+ K + S+ +SPDG +LA+G+ D + I+D+
Sbjct: 119 KYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 395 KRRLL 399
+LL
Sbjct: 179 TGKLL 183
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 52/198 (26%), Positives = 86/198 (43%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSPDS+++AT S G ++ V + + + +I + P +G LAS A
Sbjct: 113 AFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSP---DGKY--LASGA 167
Query: 219 QDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL- 275
DG + ++ + L LEGH P R + F P + L T D ++ D ANL
Sbjct: 168 IDGIINIFDIATGKLLHTLEGHAMPIR--SLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 276 ---EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
GH + +S + F P + D S ++WD + V H V+ + +
Sbjct: 226 GTLSGHGSWVLS-VAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNP 284
Query: 333 DGSVVATGGLDAFGRVWD 350
GS + + G D ++D
Sbjct: 285 TGSKIVSAGDDRAIHIYD 302
Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 32/105 (30%), Positives = 50/105 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G PI +FSPDSQ + TAS G K++ V L T GH V ++ F P +
Sbjct: 188 GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTH- 246
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG 254
S + D S+K+W + + H+ +V +K++P+G
Sbjct: 247 ----FVSSSSDKSIKVWDTSSRSCVNTFFDHQD-QVWSVKYNPTG 286
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 255 (94.8 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 63/187 (33%), Positives = 92/187 (49%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP 271
++ SC ++ S + D L N+ VS I HP +L +C D W++ P
Sbjct: 335 NVTSCTENVSAAKF----DYKLNNIFRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLP 390
Query: 272 LANL----EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
N+ GH + +S FHPSG L T D + +LWDLN+G+ L EGH V+
Sbjct: 391 QGNVLLTGSGHTDW-LSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWS 449
Query: 328 MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
++ G VA+ LD ++WD+ + RC L GH SV S++F P L T S D
Sbjct: 450 CTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKT 509
Query: 388 VKIWDLR 394
+ +WD R
Sbjct: 510 LSVWDAR 516
Score = 234 (87.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 67/216 (31%), Positives = 96/216 (44%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
+L FR H+ V I HP L SC++D K+ L + L GH +
Sbjct: 351 KLNNIFRLHELPVSCIVMHPCRDY-----LISCSEDRLWKMVGLPQGNVLLTGSGHTDW- 404
Query: 245 VSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCC 299
+S FHPSG L T D + W L+ LEGH V +H G F+ +
Sbjct: 405 LSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHN-HAVWSCTWHSCGDFVASAS 463
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + ++WD+N + GH V + F +++ T D VWD RTG+C
Sbjct: 464 LDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQS 523
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
L GH+ SV F+P G+ +A+ K+WD RK
Sbjct: 524 LYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRK 559
Score = 203 (76.5 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 69/247 (27%), Positives = 109/247 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F P +AT+S KLW + + E T GH+ V + +H S G
Sbjct: 400 GHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWH---SCG 456
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+AS + D + K+W ++ + L GH V+ I+F P L T D + W
Sbjct: 457 DF--VASASLDMTSKIWDVNSERCRYTLYGHTD-SVNSIEFFPFSNILLTASADKTLSVW 513
Query: 267 RLDTPLA--NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
T +L GH V+ F P G + +C +LWD + ++ +
Sbjct: 514 DARTGKCEQSLYGHM-HSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSS 572
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
++F G V+A + + DL++G+ I L GH V SV FS G +L +G
Sbjct: 573 GNEVNFDQSGRVLAQASANGIIHLLDLKSGQ-IHKLVGHESEVHSVVFSHLGENLYSGGS 631
Query: 385 DNAVKIW 391
D +++W
Sbjct: 632 DGTIRLW 638
Score = 189 (71.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 65/252 (25%), Positives = 109/252 (43%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P+S P ++ + S L K+ +P+ ++ T GH + FHP S+
Sbjct: 362 PVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSK----- 416
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT 270
LA+ + D ++KLW L+K LEGH V +H G F+ + D + W +++
Sbjct: 417 LATSSGDSTIKLWDLNKGECTLTLEGHN-HAVWSCTWHSCGDFVASASLDMTSKIWDVNS 475
Query: 271 PLAN--LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
L GH V+ I+F P L T D + +WD G+ GH V
Sbjct: 476 ERCRYTLYGHTD-SVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDA 534
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+F G ++A+ ++WD R I+ ++ S V+F G LA S + +
Sbjct: 535 TFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGII 594
Query: 389 KIWDLRKRRLLK 400
+ DL+ ++ K
Sbjct: 595 HLLDLKSGQIHK 606
Score = 181 (68.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 46/141 (32%), Positives = 68/141 (48%)
Query: 259 TCCWDH--SWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL 316
T C ++ + + D L N+ VS I HP +L +C D W++ L QG +L
Sbjct: 337 TSCTENVSAAKFDYKLNNIFRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLL 396
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG 376
GH + F GS +AT D+ ++WDL G C + LEGH +V+S + G
Sbjct: 397 TGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCG 456
Query: 377 YHLATGSEDNAVKIWDLRKRR 397
+A+ S D KIWD+ R
Sbjct: 457 DFVASASLDMTSKIWDVNSER 477
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 254 (94.5 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 76/270 (28%), Positives = 120/270 (44%)
Query: 138 HLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ--TFRGHDC 195
H T ++ C+ D + + S H+ +++ +G L + E +Q + GH
Sbjct: 346 HNTLSAVNCAAFSDDASMFALGCADSSIHLYSSTNNGPQPL-VGSQNEPLQKSSLIGHTR 404
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
V + P + SC++DG +LWS D + + GH + ++F P G
Sbjct: 405 PVFGVSISPQKE-----FILSCSEDGFTRLWSKDTKSTIVKYAGHNA-PIWDVQFSPFGY 458
Query: 256 FLGTCCWDHSWRL-DT----PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN 310
+ T D + RL D PL GH+ V + FHP+ +L T DH+ R+WD+
Sbjct: 459 YFATASHDQTARLWDVEHAAPLRVFVGHQN-DVDCVSFHPNAAYLATGSSDHTTRMWDVR 517
Query: 311 QGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG-RCIMFLEGHLKSVFS 369
G V H PV + DG +A+ +VWDLR+ + + F++ H V+S
Sbjct: 518 TGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVK-HSSIVYS 576
Query: 370 VDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
+ FS D L +G D V WDL R L
Sbjct: 577 LSFSYDNKILVSGGADTDVNFWDLTYRNNL 606
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 46/162 (28%), Positives = 74/162 (45%)
Query: 236 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPL--ANLEGHEPFRVSRIKFHP 290
+L GH ++R+ FHP + + D + W +T +L+GH V + F
Sbjct: 103 SLTGHRA-SITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTD-SVQDVAFDA 160
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
G+ L +C D S +LWD Q E + GH V ++F G V + D ++W
Sbjct: 161 QGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMW 220
Query: 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++ TG C+ GH + V V +G AT S D +++W
Sbjct: 221 EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW 262
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 46/190 (24%), Positives = 87/190 (45%)
Query: 192 GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
GH ++ + FHP+ + S ++D ++++W + +L+GH V + F
Sbjct: 106 GHRASITRVIFHPI-----FALMVSASEDATIRIWDFETGEYERSLKGHTD-SVQDVAFD 159
Query: 252 PSGRFLGTCCWDHS---WRLDTP---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR 305
G+ L +C D S W + + GH+ VS + F P+G ++ + D + +
Sbjct: 160 AQGKLLASCSADLSIKLWDFQQSYECIKTMHGHD-HNVSSVAFVPAGDYVLSASRDRTIK 218
Query: 306 LWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365
+W++ G V GH + V + +GS+ AT D RVW + C + L H
Sbjct: 219 MWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEH 278
Query: 366 SVFSVDFSPD 375
+V + ++P+
Sbjct: 279 TVECIAWAPE 288
Score = 167 (63.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 35/121 (28%), Positives = 62/121 (51%)
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
+L GH ++R+ FHP + + D + R+WD G+ +GH V ++F
Sbjct: 103 SLTGHRA-SITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQ 161
Query: 334 GSVVATGGLDAFGRVWDLRTG-RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
G ++A+ D ++WD + CI + GH +V SV F P G ++ + S D +K+W+
Sbjct: 162 GKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWE 221
Query: 393 L 393
+
Sbjct: 222 V 222
Score = 163 (62.4 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 37/108 (34%), Positives = 54/108 (50%)
Query: 287 KFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFG 346
K H G FL + D + R+WD++ G +L GH V ++F G + + D
Sbjct: 304 KGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTI 363
Query: 347 RVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
RVWDLR RC+ L H S+DF ++ +GS D VK+W+ R
Sbjct: 364 RVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 154 (59.3 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 48/198 (24%), Positives = 86/198 (43%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G I+ F P + +AS ++W E ++ +GH +V + F
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFD--- 159
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
++G + LASC+ D S+KLW + + + GH+ VS + F P+G ++ + D +
Sbjct: 160 AQGKL--LASCSADLSIKLWDFQQSYECIKTMHGHD-HNVSSVAFVPAGDYVLSASRDRT 216
Query: 266 ---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W + T + GH + V ++ H G TC D + R+W N +
Sbjct: 217 IKMWEVATGYCVKTYTGHREW-VRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRD 275
Query: 321 HGKPVYCMSFQGDGSVVA 338
H V C+++ + + A
Sbjct: 276 HEHTVECIAWAPEAAASA 293
Score = 145 (56.1 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G +A+G D R+WD+ G C++ L GH V + F P G +L + S+D +++WDL
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Query: 394 RKRRLLK 400
R +R +K
Sbjct: 369 RNKRCMK 375
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 254 (94.5 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 66/216 (30%), Positives = 103/216 (47%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
E+ ++ GH V F P + L SC++D +++LWSL + + GH +
Sbjct: 441 EVTRSLMGHTGPVYRCAFAP-----EMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHV-YP 494
Query: 245 VSRIKFHPSGRFLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCC 299
V ++F P G + +C +D + W D+ L GH V ++FHP+ ++ T
Sbjct: 495 VWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLS-DVDCVQFHPNSNYVATGS 553
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + RLWD GQ V GH V ++F G +A+G +D +WDL G +
Sbjct: 554 SDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTT 613
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
L H +V ++ FS DG LA DN + +WD K
Sbjct: 614 LLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHK 649
Score = 227 (85.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 81/297 (27%), Positives = 132/297 (44%)
Query: 125 EATRTARNQ-ELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE 183
+A R A + L K +++ + + + ++ S DS +A ++W++
Sbjct: 349 KALREASKRLALSKDQLPSAVFYTVLNSHQGVTCAEISDDSTMLACGFGDSSVRIWSLTP 408
Query: 184 CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPF 243
+L +T + D L E A D +V++ +L GH
Sbjct: 409 AKL-RTLKDAD------SLRELDKESA---------DINVRMLDDRSGEVTRSLMGHTG- 451
Query: 244 RVSRIKFHPSGRFLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTC 298
V R F P L +C D + W L T + GH + V ++F P G + +C
Sbjct: 452 PVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHV-YPVWDVRFAPHGYYFVSC 510
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
+D + RLW + Q + GH V C+ F + + VATG D R+WD TG+ +
Sbjct: 511 SYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVR 570
Query: 359 FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
+ GH SV S+ FS G +LA+GS D+ + IWDL L+ T LL ++ VT++
Sbjct: 571 LMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLV---TTLLRHTSTVTTI 624
Score = 142 (55.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 43/170 (25%), Positives = 74/170 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ F+P + + S+ +LW + ++ F GH +V ++FHP +
Sbjct: 490 GHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNY- 548
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+A+ + D +V+LW + + GH+ VS + F GR+L + DH+ W
Sbjct: 549 ----VATGSSDRTVRLWDNMTGQSVRLMTGHKG-SVSSLAFSACGRYLASGSVDHNIIIW 603
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE 314
L + L H V+ I F G L D++ LWD ++ E
Sbjct: 604 DLSNGSLVTTLLRHTS-TVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTE 652
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 252 (93.8 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 79/257 (30%), Positives = 118/257 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
GD S C FSPD ++AT + K+W + ++ TF GH+ ++ ++++ S+G
Sbjct: 326 GDLYIRSVC-FSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYS---SDG 381
Query: 210 AVCSLASCAQDGSVKLWSLDKDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 266
+ S + D K+W ++K L N E V+ + P GR + D+
Sbjct: 382 RF--IVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIV 439
Query: 267 RL-DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-- 319
RL D L EGH V + F P G+ L + D S +LWDL+ +
Sbjct: 440 RLWDAQTGYFLERYEGHLD-SVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRAT 498
Query: 320 --GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP-DG 376
GH V ++F DGS + +G D + WD R G M L+GH SV SV SP +
Sbjct: 499 FNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNN 558
Query: 377 YH--LATGSEDNAVKIW 391
H ATGS D ++W
Sbjct: 559 SHGVFATGSGDFRSRLW 575
Score = 243 (90.6 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 76/253 (30%), Positives = 118/253 (46%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTF-----RGHDCNVGAIEFHPLPSEGAVCS 213
+FS D +++AT + +++ V + V F + D + ++ F P +G
Sbjct: 288 NFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSP---DGNY-- 341
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT 270
LA+ A+D +VK+W + GHE + + + GRF+ + D W ++
Sbjct: 342 LATGAEDKTVKVWDIHTKKIQHTFYGHE-LDIYSLDYSSDGRFIVSGSGDKKAKIWDIEK 400
Query: 271 -----PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
L N E V+ + P GR + D+ RLWD G + EGH V
Sbjct: 401 GKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSV 460
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDL---RT-GRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
Y ++F DG +A+G LD ++WDL R+ RC GH V SV FSPDG L +
Sbjct: 461 YSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLIS 520
Query: 382 GSEDNAVKIWDLR 394
GS+D +V+ WD R
Sbjct: 521 GSKDRSVQFWDPR 533
Score = 230 (86.0 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 57/167 (34%), Positives = 85/167 (50%)
Query: 245 VSRIKFHPSGRFLGTCCWDHS---WRLDTPLAN--LEGHEPFRVSRIKFHPSGRFLGTCC 299
+ + F P G +L T D + W + T GHE + + + GRF+ +
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHE-LDIYSLDYSSDGRFIVSGS 388
Query: 300 WDHSWRLWDLNQGQEVL---HQE-GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
D ++WD+ +G+ ++E G V ++ DG +VA G LD R+WD +TG
Sbjct: 389 GDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGY 448
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402
+ EGHL SV+SV FSPDG LA+GS D ++K+WDL R C
Sbjct: 449 FLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRC 495
Score = 159 (61.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 310 NQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI-MFLEGHLKS-- 366
N ++LH H V C++F DG +ATG + +++D+ TG+ + F++ K
Sbjct: 269 NLNIDLLHNLQHNSVVCCVNFSNDGKYLATG-CNRSAQIYDVDTGKKVHAFVDESEKDGD 327
Query: 367 --VFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ SV FSPDG +LATG+ED VK+WD+ +++
Sbjct: 328 LYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKI 361
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 53/192 (27%), Positives = 87/192 (45%)
Query: 128 RTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELV 187
+ A+ +++K + ++ +VG ++ + SPD + VA S + +LW +
Sbjct: 391 KKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFL 450
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD----KDTPLANLEGHEPF 243
+ + GH +V ++ F P +G SLAS + D S+KLW L + A GH+ F
Sbjct: 451 ERYEGHLDSVYSVAFSP---DGK--SLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDF 505
Query: 244 RVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPSGRFLG-- 296
+S + F P G +L + D S W R T L+GH+ +S + P G
Sbjct: 506 VLS-VAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVIS-VALSPKNNSHGVF 563
Query: 297 -TCCWDHSWRLW 307
T D RLW
Sbjct: 564 ATGSGDFRSRLW 575
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 250 (93.1 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 68/234 (29%), Positives = 117/234 (50%)
Query: 193 HDCNV-GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
H ++ G + PS+ + + D +V ++ + LA L+GH +V+ + FH
Sbjct: 217 HSASIPGILALDLCPSD--TNKILTGGADKNVVVFDKSSEQILATLKGHTK-KVTSVVFH 273
Query: 252 PSGRFLGTCCWDHSWRL-DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 306
PS + + D + R+ P A+ + HE V+ + H +G +L + D W
Sbjct: 274 PSQELVFSASPDATIRIWSVPNASCVQVVRAHES-AVTGLSLHATGDYLLSSSDDQYWAF 332
Query: 307 WDLNQGQEV--LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
D+ G+ + + E G + C F DG + TG +D+ ++WDL+ + GH
Sbjct: 333 SDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTD 418
+ S+ FS +GY+LAT ++D++VK+WDLRK + K T L N+ V SL+ D
Sbjct: 393 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK--TLQLDNNFEVKSLIFD 444
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 64/261 (24%), Positives = 105/261 (40%)
Query: 140 TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGA 199
+S I + G T+ ++ F P + V +AS ++W+VP VQ R H+ V
Sbjct: 252 SSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTG 311
Query: 200 IEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP-FRVSRIKFHPSGRFLG 258
+ H + G L S + D + L + ++ +FHP G G
Sbjct: 312 LSLH---ATGDY--LLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFG 366
Query: 259 TCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ 313
T D W L T +AN GH ++ I F +G +L T D S +LWDL + +
Sbjct: 367 TGTMDSQIKIWDLKERTNVANFPGHSG-PITSIAFSENGYYLATAADDSSVKLWDLRKLK 425
Query: 314 EVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372
Q + V + F G+ +A GG D +++ + I+ H V F
Sbjct: 426 NFKTLQLDNNFEVKSLIFDQSGTYLALGGTDV--QIYICKQWTEILHFTEHSGLTTGVAF 483
Query: 373 SPDGYHLATGSEDNAVKIWDL 393
+A+ D ++K + L
Sbjct: 484 GHHAKFIASTGMDRSLKFYSL 504
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 250 (93.1 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 68/234 (29%), Positives = 117/234 (50%)
Query: 193 HDCNV-GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
H ++ G + PS+ + + D +V ++ + LA L+GH +V+ + FH
Sbjct: 217 HSASIPGILALDLCPSD--TNKILTGGADKNVVVFDKSSEQILATLKGHTK-KVTSVVFH 273
Query: 252 PSGRFLGTCCWDHSWRL-DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 306
PS + + D + R+ P A+ + HE V+ + H +G +L + D W
Sbjct: 274 PSQELVFSASPDATIRIWSVPNASCVQVVRAHES-AVTGLSLHATGDYLLSSSDDQYWAF 332
Query: 307 WDLNQGQEV--LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
D+ G+ + + E G + C F DG + TG +D+ ++WDL+ + GH
Sbjct: 333 SDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTD 418
+ S+ FS +GY+LAT ++D++VK+WDLRK + K T L N+ V SL+ D
Sbjct: 393 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK--TLQLDNNFEVKSLIFD 444
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 64/261 (24%), Positives = 105/261 (40%)
Query: 140 TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGA 199
+S I + G T+ ++ F P + V +AS ++W+VP VQ R H+ V
Sbjct: 252 SSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTG 311
Query: 200 IEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP-FRVSRIKFHPSGRFLG 258
+ H + G L S + D + L + ++ +FHP G G
Sbjct: 312 LSLH---ATGDY--LLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFG 366
Query: 259 TCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ 313
T D W L T +AN GH ++ I F +G +L T D S +LWDL + +
Sbjct: 367 TGTMDSQIKIWDLKERTNVANFPGHSG-PITSIAFSENGYYLATAADDSSVKLWDLRKLK 425
Query: 314 EVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372
Q + V + F G+ +A GG D +++ + I+ H V F
Sbjct: 426 NFKTLQLDNNFEVKSLIFDQSGTYLALGGTDV--QIYICKQWTEILHFTEHSGVTTGVAF 483
Query: 373 SPDGYHLATGSEDNAVKIWDL 393
+A+ D ++K + L
Sbjct: 484 GHHAKFIASTGMDRSLKFYSL 504
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 244 (91.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 64/225 (28%), Positives = 110/225 (48%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
+L+ T GH ++ + +F P G L + + D +VK+W++D L GH+
Sbjct: 78 KLMCTLEGHTKSISSAKFSPC---GKY--LGTSSADKTVKIWNMDHMICERTLTGHK-LG 131
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRLDTPLAN-----LEGHEPFRVSRIKFHPSGRFLGTCC 299
V+ I + R + + D + ++ + + L+GH + V F+P + +
Sbjct: 132 VNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNY-VFCCNFNPQSSLVVSGS 190
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
+D S R+WD+ G + H PV +SF DGS++A+G D R+WD G+CI
Sbjct: 191 FDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 360 L-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
L + V V FSP+G ++ + D+ +K+WD K + LK T
Sbjct: 251 LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT 295
Score = 237 (88.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 69/271 (25%), Positives = 125/271 (46%)
Query: 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203
+ C+ G T+ IS FSP +++ T+S K+W + +T GH V I +
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAW- 137
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
S + C + S + D ++K++ + L+GH + V F+P + + +D
Sbjct: 138 ---SSDSRC-VVSASDDKTLKIFEIVTSRMTKTLKGHNNY-VFCCNFNPQSSLVVSGSFD 192
Query: 264 HS---WRLDTPLA--NLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH 317
S W + T + L H +P VS + F+ G + + +D R+WD GQ +
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDP--VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 318 Q-EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV--DFS- 373
+ PV + F +G + LD+ ++WD G+ + GH S + + +FS
Sbjct: 251 LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSV 310
Query: 374 PDGYHLATGSEDNAVKIWDLRKRRLLKWCTQ 404
G + +GSED + IW+L+ R +++ C +
Sbjct: 311 TGGKWIISGSEDCKIYIWNLQTREIVQ-CLE 340
Score = 225 (84.3 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 66/244 (27%), Positives = 118/244 (48%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
++S DS+ V +AS K++ + + +T +GH+ V F+P S + S +
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS-----LVVSGS 190
Query: 219 QDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----L 272
D SV++W + + L H +P VS + F+ G + + +D R+ DT +
Sbjct: 191 FDESVRIWDVKTGMCIKTLPAHSDP--VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM--SF 330
L E V+ +KF P+G+++ D + +LWD ++G+ + GH YC+ +F
Sbjct: 249 KTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANF 308
Query: 331 QGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS--EDNA 387
G + +G D +W+L+T + LEGH + V + D P +A+G+ DN
Sbjct: 309 SVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNK 368
Query: 388 VKIW 391
+ IW
Sbjct: 369 IHIW 372
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 244 (91.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 64/225 (28%), Positives = 110/225 (48%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
+L+ T GH ++ + +F P G L + + D +VK+W++D L GH+
Sbjct: 78 KLMCTLEGHTKSISSAKFSPC---GKY--LGTSSADKTVKIWNMDHMICERTLTGHK-LG 131
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRLDTPLAN-----LEGHEPFRVSRIKFHPSGRFLGTCC 299
V+ I + R + + D + ++ + + L+GH + V F+P + +
Sbjct: 132 VNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNY-VFCCNFNPQSSLVVSGS 190
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
+D S R+WD+ G + H PV +SF DGS++A+G D R+WD G+CI
Sbjct: 191 FDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 360 L-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
L + V V FSP+G ++ + D+ +K+WD K + LK T
Sbjct: 251 LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT 295
Score = 237 (88.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 69/271 (25%), Positives = 125/271 (46%)
Query: 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203
+ C+ G T+ IS FSP +++ T+S K+W + +T GH V I +
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAW- 137
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
S + C + S + D ++K++ + L+GH + V F+P + + +D
Sbjct: 138 ---SSDSRC-VVSASDDKTLKIFEIVTSRMTKTLKGHNNY-VFCCNFNPQSSLVVSGSFD 192
Query: 264 HS---WRLDTPLA--NLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH 317
S W + T + L H +P VS + F+ G + + +D R+WD GQ +
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDP--VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKT 250
Query: 318 Q-EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV--DFS- 373
+ PV + F +G + LD+ ++WD G+ + GH S + + +FS
Sbjct: 251 LVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSV 310
Query: 374 PDGYHLATGSEDNAVKIWDLRKRRLLKWCTQ 404
G + +GSED + IW+L+ R +++ C +
Sbjct: 311 TGGKWIISGSEDCKIYIWNLQTREIVQ-CLE 340
Score = 225 (84.3 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 66/244 (27%), Positives = 118/244 (48%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
++S DS+ V +AS K++ + + +T +GH+ V F+P S + S +
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS-----LVVSGS 190
Query: 219 QDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----L 272
D SV++W + + L H +P VS + F+ G + + +D R+ DT +
Sbjct: 191 FDESVRIWDVKTGMCIKTLPAHSDP--VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM--SF 330
L E V+ +KF P+G+++ D + +LWD ++G+ + GH YC+ +F
Sbjct: 249 KTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANF 308
Query: 331 QGDGSV-VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS--EDNA 387
G + +G D +W+L+T + LEGH + V + D P +A+G+ DN
Sbjct: 309 SVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNK 368
Query: 388 VKIW 391
+ IW
Sbjct: 369 IHIW 372
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 249 (92.7 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 68/234 (29%), Positives = 117/234 (50%)
Query: 193 HDCNV-GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
H ++ G + PS+ + + D +V ++ + LA L+GH +V+ + FH
Sbjct: 218 HSASIPGILALDLCPSD--TNKILTGGADKNVIVFDKSSEQILATLKGHSK-KVTSVVFH 274
Query: 252 PSGRFLGTCCWDHSWRL-DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 306
PS + + D + R+ P A+ + HE V+ + H +G +L + D W
Sbjct: 275 PSQDLVFSASPDATIRIWSVPNASCVQVVRAHEG-SVTGLSLHATGDYLLSSSDDQYWAF 333
Query: 307 WDLNQGQEV--LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
D+ G+ + + E G + C F DG + TG +D+ ++WDL+ + GH
Sbjct: 334 SDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS 393
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTD 418
+ S+ FS +GY+LAT ++D++VK+WDLRK + K T L N+ V SL+ D
Sbjct: 394 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK--TLQLDNNFEVKSLIFD 445
Score = 167 (63.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 63/261 (24%), Positives = 105/261 (40%)
Query: 140 TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGA 199
+S I + G ++ ++ F P V +AS ++W+VP VQ R H+ +V
Sbjct: 253 SSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTG 312
Query: 200 IEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP-FRVSRIKFHPSGRFLG 258
+ H + G L S + D + L + ++ +FHP G G
Sbjct: 313 LSLH---ATGDY--LLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFG 367
Query: 259 TCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ 313
T D W L T +AN GH ++ I F +G +L T D S +LWDL + +
Sbjct: 368 TGTMDSQIKIWDLKERTNVANFPGHSG-PITSIAFSENGYYLATAADDSSVKLWDLRKLK 426
Query: 314 EVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372
Q + V + F G+ +A GG D +++ + I+ H V F
Sbjct: 427 NFKTLQLDNNFEVKSLIFDQSGTYLALGGTDV--QIYICKQWTEILHFTEHSGLTTGVAF 484
Query: 373 SPDGYHLATGSEDNAVKIWDL 393
+A+ D ++K + L
Sbjct: 485 GHHAKFIASTGMDRSLKFYSL 505
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 249 (92.7 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 64/206 (31%), Positives = 107/206 (51%)
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLAN---- 274
D +V ++ + LA L+GH +V+ + FHPS + + D + R+ P A+
Sbjct: 252 DKNVVVFDKSSEQILATLKGHTK-KVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQV 310
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV--LHQEGHGKPVYCMSFQG 332
+ HE V+ + H +G +L + D W D+ G+ + + E G + C F
Sbjct: 311 VRAHES-AVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP 369
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
DG + TG +D+ ++WDL+ + GH + S+ FS +GY+LAT ++D++VK+WD
Sbjct: 370 DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD 429
Query: 393 LRKRRLLKWCTQLLPNSIGVTSLLTD 418
LRK + K T L N+ V SL+ D
Sbjct: 430 LRKLKNFK--TLQLDNNFEVKSLIFD 453
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 64/261 (24%), Positives = 105/261 (40%)
Query: 140 TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGA 199
+S I + G T+ ++ F P + V +AS ++W+VP VQ R H+ V
Sbjct: 261 SSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQVVRAHESAVTG 320
Query: 200 IEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP-FRVSRIKFHPSGRFLG 258
+ H + G L S + D + L + ++ +FHP G G
Sbjct: 321 LSLH---ATGDY--LLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFG 375
Query: 259 TCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ 313
T D W L T +AN GH ++ I F +G +L T D S +LWDL + +
Sbjct: 376 TGTMDSQIKIWDLKERTNVANFPGHSG-PITSIAFSENGYYLATAADDSSVKLWDLRKLK 434
Query: 314 EVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372
Q + V + F G+ +A GG D +++ + I+ H V F
Sbjct: 435 NFKTLQLDNNFEVKSLIFDQSGTYLALGGTDV--QIYICKQWTEILHFTEHSGLTTGVAF 492
Query: 373 SPDGYHLATGSEDNAVKIWDL 393
+A+ D ++K + L
Sbjct: 493 GHHAKFIASTGMDRSLKFYSL 513
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 250 (93.1 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 61/201 (30%), Positives = 96/201 (47%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWD-HSWRLDTP 271
LA+ D V LWS++K + +L GH P R+ G+ W L+
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 272 --LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L L GH+ + + FHP G F+ + D + +LWD+ + V GH + V C+
Sbjct: 96 KILRTLMGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
F DG +A+ D ++WDL G+ + GH V V+F P+ Y LA+GS D ++
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 390 IWDLRKRRLLKWCTQLLPNSI 410
WDL K +++ C + P +
Sbjct: 215 FWDLEKFQVVS-CIEGEPGPV 234
Score = 206 (77.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 53/185 (28%), Positives = 89/185 (48%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T P+ + + + S SG ++W + ++++T GH N+ +++FHP
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY- 116
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
G +AS +QD ++KLW + + + GH V ++F P G++L + DH+
Sbjct: 117 --GEF--VASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDGKWLASAADDHTV 171
Query: 266 --WRLDTP--LANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W L ++ GH P V ++FHP+ L + D + R WDL + Q V EG
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
Query: 321 HGKPV 325
PV
Sbjct: 230 EPGPV 234
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
SGR L T D LW +N+ ++ GH PV + ++ G RVWD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
L + + L GH ++ S+DF P G +A+GS+D +K+WD+R++
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Score = 129 (50.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 55/210 (26%), Positives = 86/210 (40%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEEYSXXXXXXXXXXXXXHLHIPEATRTARNQELQKHL 139
++T + ++NL + +P C+ L+ PE A +Q +
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMS------LTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 140 TSLS---IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN 196
L I + +G I F P + VA+ S KLW + V +RGH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGR 255
V + F P +G LAS A D +VKLW L ++ GH P V ++FHP+
Sbjct: 150 VRCLRFSP---DGKW--LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEY 202
Query: 256 FLGTCCWDHS---WRLDT--PLANLEGHEP 280
L + D + W L+ ++ +EG EP
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEG-EP 231
Score = 118 (46.6 bits), Expect = 0.00087, P = 0.00087
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 331 QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKI 390
+ G ++ATGG D +W + CIM L GH V SV + + GS+ ++++
Sbjct: 30 KASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 391 WDLRKRRLLK 400
WDL ++L+
Sbjct: 90 WDLEAAKILR 99
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 248 (92.4 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 68/234 (29%), Positives = 117/234 (50%)
Query: 193 HDCNV-GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
H ++ G + PS+ + + D +V ++ + LA L+GH +V+ + FH
Sbjct: 217 HSASIPGILALDLCPSD--TNKILTGGADKNVVVFDKSSEQILATLKGHTK-KVTSVVFH 273
Query: 252 PSGRFLGTCCWDHSWRL-DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 306
PS + + D + R+ P A+ + HE V+ + H +G +L + D W
Sbjct: 274 PSQDLVFSASPDATIRIWSVPNASCVQVVRAHES-AVTGLSLHATGDYLLSSSDDQYWAF 332
Query: 307 WDLNQGQEV--LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
D+ G+ + + E G + C F DG + TG +D+ ++WDL+ + GH
Sbjct: 333 SDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTD 418
+ S+ FS +GY+LAT ++D++VK+WDLRK + K T L N+ V SL+ D
Sbjct: 393 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK--TLQLDNNFEVKSLIFD 444
Score = 169 (64.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 64/261 (24%), Positives = 104/261 (39%)
Query: 140 TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGA 199
+S I + G T+ ++ F P V +AS ++W+VP VQ R H+ V
Sbjct: 252 SSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTG 311
Query: 200 IEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP-FRVSRIKFHPSGRFLG 258
+ H + G L S + D + L + ++ +FHP G G
Sbjct: 312 LSLH---ATGDY--LLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFG 366
Query: 259 TCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ 313
T D W L T +AN GH ++ I F +G +L T D S +LWDL + +
Sbjct: 367 TGTMDSQIKIWDLKERTNVANFPGHSG-PITSIAFSENGYYLATAADDSSVKLWDLRKLK 425
Query: 314 EVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372
Q + V + F G+ +A GG D +++ + I+ H V F
Sbjct: 426 NFKTLQLDNNFEVKSLIFDQSGTYLALGGTDV--QIYICKQWTEILHFTEHSGLTTGVAF 483
Query: 373 SPDGYHLATGSEDNAVKIWDL 393
+A+ D ++K + L
Sbjct: 484 GHHAKFIASTGMDRSLKFYSL 504
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 241 (89.9 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 69/255 (27%), Positives = 118/255 (46%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTV-PECELVQTFRGHDCNVGAI-EFHPLPSEGAVCSLA 215
C F P+ +A+A + L LW V +C+ T +GH GA+ E H ++G++ L
Sbjct: 72 CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHS---GAVMELH-YNTDGSM--LF 125
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPL 272
S + D +V +W + + L+GH F S + + T D + W +
Sbjct: 126 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 185
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
A ++V + F+ + + + D+ ++WDL Q + GH V +S
Sbjct: 186 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 245
Query: 333 DGSVVATGGLDAFGRVWDLRT----GRCIMFLEGHL----KSVFSVDFSPDGYHLATGSE 384
+GS + + +D RVWD+R RC+ +G++ K++ +SPDG +A GS
Sbjct: 246 EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 305
Query: 385 DNAVKIWDLRKRRLL 399
D V +WD RR+L
Sbjct: 306 DRFVYVWDTTSRRIL 320
Score = 205 (77.2 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 61/239 (25%), Positives = 108/239 (45%)
Query: 182 PECELVQT----FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP-LAN 236
P C +Q GH+ V +FHP G+ +LAS D + LW++ D A
Sbjct: 50 PRCSSLQAPIMLLSGHEGEVYCCKFHP---NGS--TLASAGFDRLILLWNVYGDCDNYAT 104
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L+GH V + ++ G L + D + W +T + L+GH F S
Sbjct: 105 LKGHSG-AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
+ + T D + +LWD+ + + + + V ++F + +GG+D +VWDL
Sbjct: 164 PQLVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 222
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
R + + GH SV + S +G +L + + DN V++WD+R + C ++ ++
Sbjct: 223 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 281
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 58/263 (22%), Positives = 110/263 (41%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
Y + G + + ++ D + +AS +W E V+ +GH V +
Sbjct: 102 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC---- 157
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
P+ + + + DG+VKLW + K + + ++V + F+ + + + D+
Sbjct: 158 YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN--TYQVLAVTFNDTSDQIISGGIDN 215
Query: 265 S---WRL-DTPLA-NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN------QGQ 313
W L L + GH V+ + G +L + D++ R+WD+ +
Sbjct: 216 DIKVWDLRQNKLTYTMRGHAD-SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 274
Query: 314 EVLHQEGHG--KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
++ H K + S+ DGS +A G D F VWD + R + L GH S+ V
Sbjct: 275 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 334
Query: 372 FSPDGYHLATGSEDNAVKIWDLR 394
F PD + + S D + + +++
Sbjct: 335 FHPDEPIIISASSDKRLYMGEIQ 357
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 241 (89.9 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 69/255 (27%), Positives = 118/255 (46%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTV-PECELVQTFRGHDCNVGAI-EFHPLPSEGAVCSLA 215
C F P+ +A+A + L LW V +C+ T +GH GA+ E H ++G++ L
Sbjct: 73 CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHS---GAVMELH-YNTDGSM--LF 126
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPL 272
S + D +V +W + + L+GH F S + + T D + W +
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
A ++V + F+ + + + D+ ++WDL Q + GH V +S
Sbjct: 187 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 333 DGSVVATGGLDAFGRVWDLRT----GRCIMFLEGHL----KSVFSVDFSPDGYHLATGSE 384
+GS + + +D RVWD+R RC+ +G++ K++ +SPDG +A GS
Sbjct: 247 EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 385 DNAVKIWDLRKRRLL 399
D V +WD RR+L
Sbjct: 307 DRFVYVWDTTSRRIL 321
Score = 205 (77.2 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 61/239 (25%), Positives = 108/239 (45%)
Query: 182 PECELVQT----FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP-LAN 236
P C +Q GH+ V +FHP G+ +LAS D + LW++ D A
Sbjct: 51 PRCSSLQAPIMLLSGHEGEVYCCKFHP---NGS--TLASAGFDRLILLWNVYGDCDNYAT 105
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L+GH V + ++ G L + D + W +T + L+GH F S
Sbjct: 106 LKGHSG-AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
+ + T D + +LWD+ + + + + V ++F + +GG+D +VWDL
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
R + + GH SV + S +G +L + + DN V++WD+R + C ++ ++
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 58/263 (22%), Positives = 110/263 (41%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
Y + G + + ++ D + +AS +W E V+ +GH V +
Sbjct: 103 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC---- 158
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
P+ + + + DG+VKLW + K + + ++V + F+ + + + D+
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN--TYQVLAVTFNDTSDQIISGGIDN 216
Query: 265 S---WRL-DTPLA-NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN------QGQ 313
W L L + GH V+ + G +L + D++ R+WD+ +
Sbjct: 217 DIKVWDLRQNKLTYTMRGHAD-SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 314 EVLHQEGHG--KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
++ H K + S+ DGS +A G D F VWD + R + L GH S+ V
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 335
Query: 372 FSPDGYHLATGSEDNAVKIWDLR 394
F PD + + S D + + +++
Sbjct: 336 FHPDEPIILSASSDKRLYMGEIQ 358
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 241 (89.9 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 69/255 (27%), Positives = 118/255 (46%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTV-PECELVQTFRGHDCNVGAI-EFHPLPSEGAVCSLA 215
C F P+ +A+A + L LW V +C+ T +GH GA+ E H ++G++ L
Sbjct: 73 CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHS---GAVMELH-YNTDGSM--LF 126
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPL 272
S + D +V +W + + L+GH F S + + T D + W +
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
A ++V + F+ + + + D+ ++WDL Q + GH V +S
Sbjct: 187 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 333 DGSVVATGGLDAFGRVWDLRT----GRCIMFLEGHL----KSVFSVDFSPDGYHLATGSE 384
+GS + + +D RVWD+R RC+ +G++ K++ +SPDG +A GS
Sbjct: 247 EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 385 DNAVKIWDLRKRRLL 399
D V +WD RR+L
Sbjct: 307 DRFVYVWDTTSRRIL 321
Score = 205 (77.2 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 61/239 (25%), Positives = 108/239 (45%)
Query: 182 PECELVQT----FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP-LAN 236
P C +Q GH+ V +FHP G+ +LAS D + LW++ D A
Sbjct: 51 PRCSSLQAPIMLLSGHEGEVYCCKFHP---NGS--TLASAGFDRLILLWNVYGDCDNYAT 105
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L+GH V + ++ G L + D + W +T + L+GH F S
Sbjct: 106 LKGHSG-AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
+ + T D + +LWD+ + + + + V ++F + +GG+D +VWDL
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
R + + GH SV + S +G +L + + DN V++WD+R + C ++ ++
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 58/263 (22%), Positives = 110/263 (41%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
Y + G + + ++ D + +AS +W E V+ +GH V +
Sbjct: 103 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC---- 158
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
P+ + + + DG+VKLW + K + + ++V + F+ + + + D+
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN--TYQVLAVTFNDTSDQIISGGIDN 216
Query: 265 S---WRL-DTPLA-NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN------QGQ 313
W L L + GH V+ + G +L + D++ R+WD+ +
Sbjct: 217 DIKVWDLRQNKLTYTMRGHAD-SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 314 EVLHQEGHG--KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
++ H K + S+ DGS +A G D F VWD + R + L GH S+ V
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 335
Query: 372 FSPDGYHLATGSEDNAVKIWDLR 394
F PD + + S D + + +++
Sbjct: 336 FHPDEPIILSASSDKRLYMGEIQ 358
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 241 (89.9 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 69/255 (27%), Positives = 118/255 (46%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTV-PECELVQTFRGHDCNVGAI-EFHPLPSEGAVCSLA 215
C F P+ +A+A + L LW V +C+ T +GH GA+ E H ++G++ L
Sbjct: 73 CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHS---GAVMELH-YNTDGSM--LF 126
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPL 272
S + D +V +W + + L+GH F S + + T D + W +
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
A ++V + F+ + + + D+ ++WDL Q + GH V +S
Sbjct: 187 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 333 DGSVVATGGLDAFGRVWDLRT----GRCIMFLEGHL----KSVFSVDFSPDGYHLATGSE 384
+GS + + +D RVWD+R RC+ +G++ K++ +SPDG +A GS
Sbjct: 247 EGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 385 DNAVKIWDLRKRRLL 399
D V +WD RR+L
Sbjct: 307 DRFVYVWDTTSRRIL 321
Score = 205 (77.2 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 61/239 (25%), Positives = 108/239 (45%)
Query: 182 PECELVQT----FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP-LAN 236
P C +Q GH+ V +FHP G+ +LAS D + LW++ D A
Sbjct: 51 PRCSSLQAPIMLLSGHEGEVYCCKFHP---NGS--TLASAGFDRLILLWNVYGDCDNYAT 105
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L+GH V + ++ G L + D + W +T + L+GH F S
Sbjct: 106 LKGHSG-AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
+ + T D + +LWD+ + + + + V ++F + +GG+D +VWDL
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
R + + GH SV + S +G +L + + DN V++WD+R + C ++ ++
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNV 282
Score = 155 (59.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 59/263 (22%), Positives = 110/263 (41%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
Y + G + + ++ D + +AS +W E V+ +GH V +
Sbjct: 103 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC---- 158
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
P+ + + + DG+VKLW + K + + ++V + F+ + + + D+
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN--TYQVLAVTFNDTSDQIISGGIDN 216
Query: 265 S---WRL-DTPLA-NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ--GQE--- 314
W L L + GH V+ + G +L + D++ R+WD+ +E
Sbjct: 217 DIKVWDLRQNKLTYTMRGHAD-SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 315 -VLHQEGHG--KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ H K + S+ DGS +A G D F VWD + R + L GH S+ V
Sbjct: 276 RIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 335
Query: 372 FSPDGYHLATGSEDNAVKIWDLR 394
F PD + + S D + + +++
Sbjct: 336 FHPDEPIILSASSDKRLYMGEIQ 358
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 250 (93.1 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 61/201 (30%), Positives = 96/201 (47%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWD-HSWRLDTP 271
LA+ D V LWS++K + +L GH P R+ G+ W L+
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 272 --LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L L GH+ + + FHP G F+ + D + +LWD+ + V GH + V C+
Sbjct: 96 KILRTLMGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
F DG +A+ D ++WDL G+ + GH V V+F P+ Y LA+GS D ++
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 390 IWDLRKRRLLKWCTQLLPNSI 410
WDL K +++ C + P +
Sbjct: 215 FWDLEKFQVVS-CIEGEPGPV 234
Score = 247 (92.0 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 65/221 (29%), Positives = 107/221 (48%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
LW++ + + + GH V ++ + P E V +Q GS+++W L+ L L
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNT-PEELIVAG----SQSGSIRVWDLEAAKILRTL 101
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPSG 292
GH+ + + FHP G F+ + D + W R + GH V ++F P G
Sbjct: 102 MGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDG 159
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
++L + DH+ +LWDL G+ + GH PV + F + ++A+G D R WDL
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA-VKIWD 392
+ + +EG V SV F+PDG L +G +D+ V W+
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 62/216 (28%), Positives = 103/216 (47%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T P+ + + + S SG ++W + ++++T GH N+ +++FHP
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY- 116
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
G +AS +QD ++KLW + + + GH V ++F P G++L + DH+
Sbjct: 117 --GEF--VASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDGKWLASAADDHTV 171
Query: 266 --WRLDTP--LANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W L ++ GH P V ++FHP+ L + D + R WDL + Q V EG
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
PV + F DG + +G D+ RV+ RC
Sbjct: 230 EPGPVRSVLFNPDGCCLYSGCQDSL-RVYGWEPERC 264
Score = 177 (67.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
SGR L T D LW +N+ ++ GH PV + ++ G RVWD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
L + + L GH ++ S+DF P G +A+GS+D +K+WD+R++
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Score = 155 (59.6 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 64/237 (27%), Positives = 100/237 (42%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEEYSXXXXXXXXXXXXXHLHIPEATRTARNQELQKHL 139
++T + ++NL + +P C+ L+ PE A +Q +
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMS------LTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 140 TSLS---IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN 196
L I + +G I F P + VA+ S KLW + V +RGH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGR 255
V + F P +G LAS A D +VKLW L ++ GH P V ++FHP+
Sbjct: 150 VRCLRFSP---DGKW--LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEY 202
Query: 256 FLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
L + D + W L+ ++ +EG EP V + F+P G L + C D S R++
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEG-EPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 250 (93.1 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 61/201 (30%), Positives = 96/201 (47%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWD-HSWRLDTP 271
LA+ D V LWS++K + +L GH P R+ G+ W L+
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 272 --LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L L GH+ + + FHP G F+ + D + +LWD+ + V GH + V C+
Sbjct: 96 KILRTLMGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
F DG +A+ D ++WDL G+ + GH V V+F P+ Y LA+GS D ++
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 390 IWDLRKRRLLKWCTQLLPNSI 410
WDL K +++ C + P +
Sbjct: 215 FWDLEKFQVVS-CIEGEPGPV 234
Score = 247 (92.0 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 65/221 (29%), Positives = 107/221 (48%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
LW++ + + + GH V ++ + P E V +Q GS+++W L+ L L
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNT-PEELIVAG----SQSGSIRVWDLEAAKILRTL 101
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPSG 292
GH+ + + FHP G F+ + D + W R + GH V ++F P G
Sbjct: 102 MGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDG 159
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
++L + DH+ +LWDL G+ + GH PV + F + ++A+G D R WDL
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA-VKIWD 392
+ + +EG V SV F+PDG L +G +D+ V W+
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 62/216 (28%), Positives = 103/216 (47%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T P+ + + + S SG ++W + ++++T GH N+ +++FHP
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY- 116
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
G +AS +QD ++KLW + + + GH V ++F P G++L + DH+
Sbjct: 117 --GEF--VASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDGKWLASAADDHTV 171
Query: 266 --WRLDTP--LANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W L ++ GH P V ++FHP+ L + D + R WDL + Q V EG
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
PV + F DG + +G D+ RV+ RC
Sbjct: 230 EPGPVRSVLFNPDGCCLYSGCQDSL-RVYGWEPERC 264
Score = 177 (67.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
SGR L T D LW +N+ ++ GH PV + ++ G RVWD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
L + + L GH ++ S+DF P G +A+GS+D +K+WD+R++
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Score = 155 (59.6 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 64/237 (27%), Positives = 100/237 (42%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEEYSXXXXXXXXXXXXXHLHIPEATRTARNQELQKHL 139
++T + ++NL + +P C+ L+ PE A +Q +
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMS------LTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 140 TSLS---IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN 196
L I + +G I F P + VA+ S KLW + V +RGH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGR 255
V + F P +G LAS A D +VKLW L ++ GH P V ++FHP+
Sbjct: 150 VRCLRFSP---DGKW--LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEY 202
Query: 256 FLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
L + D + W L+ ++ +EG EP V + F+P G L + C D S R++
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEG-EPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 250 (93.1 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 61/201 (30%), Positives = 96/201 (47%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWD-HSWRLDTP 271
LA+ D V LWS++K + +L GH P R+ G+ W L+
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 272 --LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L L GH+ + + FHP G F+ + D + +LWD+ + V GH + V C+
Sbjct: 96 KILRTLMGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
F DG +A+ D ++WDL G+ + GH V V+F P+ Y LA+GS D ++
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 390 IWDLRKRRLLKWCTQLLPNSI 410
WDL K +++ C + P +
Sbjct: 215 FWDLEKFQVVS-CIEGEPGPV 234
Score = 247 (92.0 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 65/221 (29%), Positives = 107/221 (48%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
LW++ + + + GH V ++ + P E V +Q GS+++W L+ L L
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNT-PEELIVAG----SQSGSIRVWDLEAAKILRTL 101
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPSG 292
GH+ + + FHP G F+ + D + W R + GH V ++F P G
Sbjct: 102 MGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDG 159
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
++L + DH+ +LWDL G+ + GH PV + F + ++A+G D R WDL
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA-VKIWD 392
+ + +EG V SV F+PDG L +G +D+ V W+
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 62/216 (28%), Positives = 103/216 (47%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T P+ + + + S SG ++W + ++++T GH N+ +++FHP
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY- 116
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
G +AS +QD ++KLW + + + GH V ++F P G++L + DH+
Sbjct: 117 --GEF--VASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDGKWLASAADDHTV 171
Query: 266 --WRLDTP--LANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W L ++ GH P V ++FHP+ L + D + R WDL + Q V EG
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
PV + F DG + +G D+ RV+ RC
Sbjct: 230 EPGPVRSVLFNPDGCCLYSGCQDSL-RVYGWEPERC 264
Score = 177 (67.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
SGR L T D LW +N+ ++ GH PV + ++ G RVWD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
L + + L GH ++ S+DF P G +A+GS+D +K+WD+R++
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Score = 155 (59.6 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 64/237 (27%), Positives = 100/237 (42%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEEYSXXXXXXXXXXXXXHLHIPEATRTARNQELQKHL 139
++T + ++NL + +P C+ L+ PE A +Q +
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMS------LTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 140 TSLS---IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN 196
L I + +G I F P + VA+ S KLW + V +RGH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGR 255
V + F P +G LAS A D +VKLW L ++ GH P V ++FHP+
Sbjct: 150 VRCLRFSP---DGKW--LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEY 202
Query: 256 FLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
L + D + W L+ ++ +EG EP V + F+P G L + C D S R++
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEG-EPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 250 (93.1 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 61/201 (30%), Positives = 96/201 (47%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWD-HSWRLDTP 271
LA+ D V LWS++K + +L GH P R+ G+ W L+
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 272 --LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L L GH+ + + FHP G F+ + D + +LWD+ + V GH + V C+
Sbjct: 96 KILRTLMGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
F DG +A+ D ++WDL G+ + GH V V+F P+ Y LA+GS D ++
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 390 IWDLRKRRLLKWCTQLLPNSI 410
WDL K +++ C + P +
Sbjct: 215 FWDLEKFQVVS-CIEGEPGPV 234
Score = 247 (92.0 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 65/221 (29%), Positives = 107/221 (48%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
LW++ + + + GH V ++ + P E V +Q GS+++W L+ L L
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNT-PEELIVAG----SQSGSIRVWDLEAAKILRTL 101
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPSG 292
GH+ + + FHP G F+ + D + W R + GH V ++F P G
Sbjct: 102 MGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDG 159
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
++L + DH+ +LWDL G+ + GH PV + F + ++A+G D R WDL
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA-VKIWD 392
+ + +EG V SV F+PDG L +G +D+ V W+
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 62/216 (28%), Positives = 103/216 (47%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T P+ + + + S SG ++W + ++++T GH N+ +++FHP
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY- 116
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
G +AS +QD ++KLW + + + GH V ++F P G++L + DH+
Sbjct: 117 --GEF--VASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDGKWLASAADDHTV 171
Query: 266 --WRLDTP--LANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W L ++ GH P V ++FHP+ L + D + R WDL + Q V EG
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
PV + F DG + +G D+ RV+ RC
Sbjct: 230 EPGPVRSVLFNPDGCCLYSGCQDSL-RVYGWEPERC 264
Score = 177 (67.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
SGR L T D LW +N+ ++ GH PV + ++ G RVWD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
L + + L GH ++ S+DF P G +A+GS+D +K+WD+R++
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Score = 155 (59.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 64/237 (27%), Positives = 100/237 (42%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEEYSXXXXXXXXXXXXXHLHIPEATRTARNQELQKHL 139
++T + ++NL + +P C+ L+ PE A +Q +
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMS------LTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 140 TSLS---IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN 196
L I + +G I F P + VA+ S KLW + V +RGH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGR 255
V + F P +G LAS A D +VKLW L ++ GH P V ++FHP+
Sbjct: 150 VRCLRFSP---DGKW--LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEY 202
Query: 256 FLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
L + D + W L+ ++ +EG EP V + F+P G L + C D S R++
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEG-EPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 250 (93.1 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 61/201 (30%), Positives = 96/201 (47%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWD-HSWRLDTP 271
LA+ D V LWS++K + +L GH P R+ G+ W L+
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 272 --LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L L GH+ + + FHP G F+ + D + +LWD+ + V GH + V C+
Sbjct: 96 KILRTLMGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
F DG +A+ D ++WDL G+ + GH V V+F P+ Y LA+GS D ++
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIR 214
Query: 390 IWDLRKRRLLKWCTQLLPNSI 410
WDL K +++ C + P +
Sbjct: 215 FWDLEKFQVVS-CIEGEPGPV 234
Score = 246 (91.7 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 64/221 (28%), Positives = 107/221 (48%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
LW++ + + + GH V ++ + P E V +Q GS+++W L+ L L
Sbjct: 47 LWSINKPNCIMSLTGHTSPVESVRLNT-PEELIVAG----SQSGSIRVWDLEAAKILRTL 101
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPSG 292
GH+ + + FHP G F+ + D + W R + GH V ++F P G
Sbjct: 102 MGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDG 159
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
++L + DH+ +LWDL G+ + GH PV + F + ++A+G D R WDL
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA-VKIWD 392
+ + +EG V S+ F+PDG L +G +D+ V W+
Sbjct: 220 KFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWE 260
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 62/216 (28%), Positives = 103/216 (47%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T P+ + + + S SG ++W + ++++T GH N+ +++FHP
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY- 116
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
G +AS +QD ++KLW + + + GH V ++F P G++L + DH+
Sbjct: 117 --GEF--VASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDGKWLASAADDHTV 171
Query: 266 --WRLDTP--LANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W L ++ GH P V ++FHP+ L + D + R WDL + Q V EG
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
PV + F DG + +G D+ RV+ RC
Sbjct: 230 EPGPVRSILFNPDGCCLYSGCQDSL-RVYGWEPERC 264
Score = 177 (67.4 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
SGR L T D LW +N+ ++ GH PV + ++ G RVWD
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
L + + L GH ++ S+DF P G +A+GS+D +K+WD+R++
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Score = 156 (60.0 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 65/237 (27%), Positives = 100/237 (42%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEEYSXXXXXXXXXXXXXHLHIPEATRTARNQELQKHL 139
++T + ++NL + +P C+ L+ PE A +Q +
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMS------LTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 140 TSLS---IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN 196
L I + +G I F P + VA+ S KLW + V +RGH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGR 255
V + F P +G LAS A D +VKLW L ++ GH P V ++FHP+
Sbjct: 150 VRCLRFSP---DGKW--LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEY 202
Query: 256 FLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
L + D + W L+ ++ +EG EP V I F+P G L + C D S R++
Sbjct: 203 LLASGSSDRTIRFWDLEKFQVVSCIEG-EPGPVRSILFNPDGCCLYSGCQD-SLRVY 257
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 244 (91.0 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 71/248 (28%), Positives = 115/248 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPSE 208
G ++ +FSP +A+ S ++W VP + T FR H V ++ F S+
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC---SD 114
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G SL + + D +VK+WS + L +L H + V KF P GR + + D + +L
Sbjct: 115 GQ--SLVTASDDKTVKVWSTHRQRFLFSLTQHINW-VRCAKFSPDGRLIVSASDDKTVKL 171
Query: 269 --DTPLANLEG---HEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
T + H F V+ + FHPSG + D++ ++WD + + H + H
Sbjct: 172 WDKTSRECIHSYCEHGGF-VTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSA 230
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V +SF G+ + T D+ ++ DL GR + L GH +V FS G + A+G
Sbjct: 231 AVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 291 SDEQVMVW 298
Score = 235 (87.8 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 73/256 (28%), Positives = 115/256 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G ++ FS +++H+A+ S +W + F GH V + F P G
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP---SG 73
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LAS ++D +V++W + H V + F G+ L T D + W
Sbjct: 74 HL--LASGSRDKTVRIWVPNVKGESTVFRAHTA-TVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GHGK 323
L +L H + V KF P GR + + D + +LWD +E +H HG
Sbjct: 131 STHRQRFLFSLTQHINW-VRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECIHSYCEHGG 188
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V + F G+ +A G+D +VWD RT R + + H +V ++ F P G +L T S
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITAS 248
Query: 384 EDNAVKIWDLRKRRLL 399
D+ +KI DL + RLL
Sbjct: 249 SDSTLKILDLMEGRLL 264
Score = 210 (79.0 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 63/221 (28%), Positives = 101/221 (45%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH V ++F L ++ LAS + D ++ +W + + GH+ V
Sbjct: 11 LERHFKGHRDAVTCVDFS-LNTK----HLASGSMDSTLMIWHMKPQSRAYRFTGHKD-AV 64
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEP-FR-----VSRIKFHPSGRFLGTCC 299
+ + F PSG L + D + R+ P N++G FR V + F G+ L T
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVP--NVKGESTVFRAHTATVRSVHFCSDGQSLVTAS 122
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + ++W ++ + + H V C F DG ++ + D ++WD + CI
Sbjct: 123 DDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHS 182
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
H V VDF P G +A DN VK+WD R RLL+
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQ 223
Score = 156 (60.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
+ +GH V+ + F + + L + D + +W + GH V C++F
Sbjct: 14 HFKGHRD-AVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 334 GSVVATGGLDAFGRVWDLRT-GRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
G ++A+G D R+W G +F H +V SV F DG L T S+D VK+W
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVF-RAHTATVRSVHFCSDGQSLVTASDDKTVKVWS 131
Query: 393 LRKRRLLKWCTQ 404
++R L TQ
Sbjct: 132 THRQRFLFSLTQ 143
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 244 (91.0 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 69/248 (27%), Positives = 116/248 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPSE 208
G ++ +FSP +A+ S ++W +P + T FR H V ++ F S+
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFC---SD 114
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G SL + + D +VK+WS + L +L H + V +F P GR + + D + +L
Sbjct: 115 GQ--SLVTASDDKTVKVWSTHRQKFLFSLSQHINW-VRCARFSPDGRLIVSASDDKTVKL 171
Query: 269 --DTPLANLEG---HEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
T + H F V+ + FHPSG + D++ ++WD+ + + H + H
Sbjct: 172 WDKTSRECVHSYCEHGGF-VTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSA 230
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V +SF G+ + T D+ ++ DL GR + L GH +V FS G + A+G
Sbjct: 231 AVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 291 SDEQVMVW 298
Score = 220 (82.5 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 71/256 (27%), Positives = 114/256 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ FS +++ +A+ S +W + F GH V + F P G
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSP---SG 73
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LAS ++D +V++W + H V + F G+ L T D + W
Sbjct: 74 HL--LASGSRDKTVRIWIPNVKGESTVFRAHTA-TVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GHGK 323
L +L H + V +F P GR + + D + +LWD +E +H HG
Sbjct: 131 STHRQKFLFSLSQHINW-VRCARFSPDGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGG 188
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V + F G+ +A +D +VWD+RT R + + H +V ++ F P G +L T S
Sbjct: 189 FVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTAS 248
Query: 384 EDNAVKIWDLRKRRLL 399
D+ +KI DL + RLL
Sbjct: 249 SDSTLKILDLMEGRLL 264
Score = 212 (79.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 62/221 (28%), Positives = 103/221 (46%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH + +++F L ++ LAS + D + +W + + GH+ V
Sbjct: 11 LERHFKGHRDAITSVDFS-LNTK----QLASGSMDSCLMVWHMKPQSRAYRFAGHKD-AV 64
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEP-FR-----VSRIKFHPSGRFLGTCC 299
+ + F PSG L + D + R+ P N++G FR V + F G+ L T
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWIP--NVKGESTVFRAHTATVRSVHFCSDGQSLVTAS 122
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + ++W ++ + + H V C F DG ++ + D ++WD + C+
Sbjct: 123 DDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHS 182
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
H V VDF P G +A S DN VK+WD+R RLL+
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQ 223
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 241 (89.9 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 69/248 (27%), Positives = 115/248 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPSE 208
G ++ +FSP +A+ S ++W VP + T FR H V ++ F S+
Sbjct: 90 GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFC---SD 145
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G S + + D ++K+WS + L +L H + V KF P GR + + D + +L
Sbjct: 146 GQ--SFVTASDDKTIKVWSTHRQKFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKL 202
Query: 269 --DTPLANLEG---HEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
T + H F V+ + FHPSG + D++ ++WD+ + + H + H
Sbjct: 203 WDKTSRECVHSYCEHGGF-VTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSA 261
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V +SF G+ + T D+ ++ DL GR + L GH +V FS G + A+G
Sbjct: 262 AVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 321
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 322 SDEQVMVW 329
Score = 222 (83.2 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 72/256 (28%), Positives = 113/256 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G ++ FS + + +A+ S +W + F GH V + F P G
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP---SG 104
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LAS ++D +V++W + H V + F G+ T D + W
Sbjct: 105 HL--LASGSRDKTVRIWVPNIKGESTVFRAHTA-TVRSVHFCSDGQSFVTASDDKTIKVW 161
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GHGK 323
L +L H + V KF P GR + + D + +LWD +E +H HG
Sbjct: 162 STHRQKFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGG 219
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V + F G+ VA G+D +VWD+RT R + + H +V ++ F P G +L T S
Sbjct: 220 FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTAS 279
Query: 384 EDNAVKIWDLRKRRLL 399
D+ +KI DL + RLL
Sbjct: 280 SDSTLKILDLMEGRLL 295
Score = 203 (76.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 60/221 (27%), Positives = 98/221 (44%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH V ++F + LAS + D + +W + + GH+ V
Sbjct: 42 LERHFKGHRDAVTCVDF-----SFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKD-AV 95
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEP-FR-----VSRIKFHPSGRFLGTCC 299
+ + F PSG L + D + R+ P N++G FR V + F G+ T
Sbjct: 96 TCVNFSPSGHLLASGSRDKTVRIWVP--NIKGESTVFRAHTATVRSVHFCSDGQSFVTAS 153
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + ++W ++ + + H V C F DG ++ + D ++WD + C+
Sbjct: 154 DDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 213
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
H V VDF P G +A DN VK+WD+R RLL+
Sbjct: 214 YCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQ 254
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 240 (89.5 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 69/255 (27%), Positives = 118/255 (46%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTV-PECELVQTFRGHDCNVGAI-EFHPLPSEGAVCSLA 215
C F P+ +A+A + L LW V +C+ T +GH GA+ E H ++G++ L
Sbjct: 73 CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHS---GAVMELH-YNTDGSM--LF 126
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPL 272
S + D +V +W + + L+GH F S + + T D + W +
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
A ++V + F+ + + + D+ ++WDL Q + GH V +S
Sbjct: 187 AVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 333 DGSVVATGGLDAFGRVWDLRT----GRCIMFLEGHL----KSVFSVDFSPDGYHLATGSE 384
+GS + + +D RVWD+R RC+ +G++ K++ +SPDG +A GS
Sbjct: 247 EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 385 DNAVKIWDLRKRRLL 399
D V +WD RR+L
Sbjct: 307 DRFVYVWDTTSRRVL 321
Score = 204 (76.9 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 62/239 (25%), Positives = 108/239 (45%)
Query: 182 PECELVQT----FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP-LAN 236
P C +Q GH+ V +FHP G+ +LAS D + LW++ D A
Sbjct: 51 PRCSSLQAPIMLLSGHEGEVYCCKFHP---NGS--TLASAGFDRLILLWNVYGDCDNYAT 105
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L+GH V + ++ G L + D + W +T + L+GH F S
Sbjct: 106 LKGHSG-AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
+ + T D + +LWD+ + V + + V ++F + +GG+D +VWDL
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
R + + GH SV + S +G +L + + DN V++WD+R + C ++ ++
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
Score = 155 (59.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 58/263 (22%), Positives = 110/263 (41%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
Y + G + + ++ D + +AS +W E V+ +GH V +
Sbjct: 103 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC---- 158
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
P+ + + + DG+VKLW + K + + ++V + F+ + + + D+
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN--TYQVLAVTFNDTSDQIISGGIDN 216
Query: 265 S---WRL-DTPLA-NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN------QGQ 313
W L L + GH V+ + G +L + D++ R+WD+ +
Sbjct: 217 DIKVWDLRQNKLTYTMRGHAD-SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 275
Query: 314 EVLHQEGHG--KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
++ H K + S+ DGS +A G D F VWD + R + L GH S+ V
Sbjct: 276 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVA 335
Query: 372 FSPDGYHLATGSEDNAVKIWDLR 394
F PD + + S D + + +++
Sbjct: 336 FHPDEPIILSASSDKRLYMGEIQ 358
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 243 (90.6 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 70/248 (28%), Positives = 115/248 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPSE 208
G ++ +FSP +A+ S ++W VP + T FR H V ++ F S+
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC---SD 114
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G S + + D +VK+WS + L +L H + V KF P GR + + D + +L
Sbjct: 115 GQ--SFVTASDDKTVKVWSTHRQKFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKL 171
Query: 269 --DTPLANLEG---HEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
T + H F V+ + FHPSG + D++ ++WD+ + + H + H
Sbjct: 172 WDKTSRECVHSYCEHGGF-VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSA 230
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V +SF G+ + T D+ ++ DL GR + L GH +V FS G + A+G
Sbjct: 231 AVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 291 SDEQVMVW 298
Score = 224 (83.9 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 71/256 (27%), Positives = 114/256 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G ++ FS +++ +A+ S +W + F GH V + F P G
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP---SG 73
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LAS ++D +V++W + H V + F G+ T D + W
Sbjct: 74 HL--LASGSRDKTVRIWVPNVKGESTVFRAHTA-TVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GHGK 323
L +L H + V KF P GR + + D + +LWD +E +H HG
Sbjct: 131 STHRQKFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGG 188
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V + F G+ +A G+D +VWD+RT R + + H +V ++ F P G +L T S
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTAS 248
Query: 384 EDNAVKIWDLRKRRLL 399
D+ +KI DL + RLL
Sbjct: 249 SDSTLKILDLMEGRLL 264
Score = 211 (79.3 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 62/221 (28%), Positives = 101/221 (45%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH V +++F L ++ LAS + D + +W + T GH+ V
Sbjct: 11 LERHFKGHRDAVTSVDFS-LNTK----QLASGSMDSCLMVWHMKPQTRAYRFAGHKD-AV 64
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEP-FR-----VSRIKFHPSGRFLGTCC 299
+ + F PSG L + D + R+ P N++G FR V + F G+ T
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVP--NVKGESTVFRAHTATVRSVHFCSDGQSFVTAS 122
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + ++W ++ + + H V C F DG ++ + D ++WD + C+
Sbjct: 123 DDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS 182
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
H V VDF P G +A DN VK+WD+R RLL+
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 223
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 238 (88.8 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 68/255 (26%), Positives = 119/255 (46%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTV-PECELVQTFRGHDCNVGAI-EFHPLPSEGAVCSLA 215
C F P+ +A++ + L +W V +CE T +GH GA+ E H ++G++ L
Sbjct: 62 CKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHS---GAVMELH-YNTDGSL--LF 115
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPL 272
S + D +V +W + + L+GH F S + T D + W +
Sbjct: 116 SASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKA 175
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
+ ++V + F+ + + + D+ ++WDL Q + + +GHG V +S
Sbjct: 176 SVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSA 235
Query: 333 DGSVVATGGLDAFGRVWDLRT----GRCIMFLEGHL----KSVFSVDFSPDGYHLATGSE 384
DGS + + +D RVWD+R RC+ +G++ K++ +S DG +A GS
Sbjct: 236 DGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSA 295
Query: 385 DNAVKIWDLRKRRLL 399
D V IWD RR++
Sbjct: 296 DRFVYIWDTTTRRIV 310
Score = 222 (83.2 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 63/230 (27%), Positives = 107/230 (46%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRV 245
+ GH+ V +FHP GA +LAS D + +W++ D A L+GH V
Sbjct: 49 IMLLSGHEGEVYCCKFHP---NGA--TLASSGYDRLILMWNVYGDCENYATLKGHSG-AV 102
Query: 246 SRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCW 300
+ ++ G L + D + W +T + L+GH F S + T
Sbjct: 103 MELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSD 162
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D + +LWD+ + V H + V ++F + +GG+D +VWDLR + I +
Sbjct: 163 DGTVKLWDIRKKASV-HTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSM 221
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
+GH SV + S DG +L + S DN+V++WD+R + C ++ ++
Sbjct: 222 QGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNV 271
Score = 168 (64.2 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 60/263 (22%), Positives = 113/263 (42%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
Y + G + + ++ D + +AS +W E V+ +GH V +
Sbjct: 92 YATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSC---- 147
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
P+ + + DG+VKLW + K + + ++V + F+ + + + D+
Sbjct: 148 FPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQN--TYQVLSVTFNDTSDQIISGGIDN 205
Query: 265 S---W--RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN------QGQ 313
W R + + +++GH V+ + G +L + D+S R+WD+ +
Sbjct: 206 DIKVWDLRQNKLIYSMQGHGD-SVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCV 264
Query: 314 EVLHQEGHG--KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
++ H K + S+ DGS +A G D F +WD T R + L GH SV V
Sbjct: 265 KIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVA 324
Query: 372 FSPDGYHLATGSEDNAVKIWDLR 394
F P+ + +GS D + I +++
Sbjct: 325 FHPEEPIVLSGSSDKRLYIGEIQ 347
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 236 (88.1 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 68/263 (25%), Positives = 123/263 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + IS FSPD + +A+AS K+W + + +T GH + I +
Sbjct: 44 GHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQ--DSK 101
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+CS + D ++K+W ++ + L+GH+ + V + F+P + + +D + W
Sbjct: 102 LICS---ASDDKTIKIWDVESGKMVKTLKGHKEY-VFGVSFNPQSNLIVSGSFDENVRIW 157
Query: 267 RLDTPLAN--LEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ--EVLHQEGH 321
++T + H +P V+ + F+ G + + +D + R+WD GQ + E
Sbjct: 158 DVNTGECTKMISAHSDP--VTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTED- 214
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR-CIMFLEGHLKSVFSV--DFSPD-GY 377
GK V + F +G V G LD R+W + C+ GH + + FS G
Sbjct: 215 GKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGK 274
Query: 378 HLATGSEDNAVKIWDLRKRRLLK 400
+ TGSEDN + I++L+ R +++
Sbjct: 275 WIVTGSEDNLIYIYNLQTREIVQ 297
Score = 233 (87.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 62/229 (27%), Positives = 112/229 (48%)
Query: 182 PECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
P L T +GH ++ +++F P +G LAS + D ++K+W LEGH+
Sbjct: 34 PNYILKYTLKGHLKSISSVKFSP---DGKW--LASASADKTIKIWGAYDGKFERTLEGHK 88
Query: 242 PFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLG 296
+S I + + + + D + W +++ + L+GH+ + V + F+P +
Sbjct: 89 E-GISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEY-VFGVSFNPQSNLIV 146
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ +D + R+WD+N G+ H PV + F DG++V +G D R+WD TG+
Sbjct: 147 SGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQL 206
Query: 357 IMFLEGHL-KSVFSVDFSPDGYHLATGSEDNAVKIWDLRK-RRLLKWCT 403
+ + K V V FSP+G + G+ DN +++W ++ LK T
Sbjct: 207 LNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYT 255
Score = 220 (82.5 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 71/254 (27%), Positives = 124/254 (48%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G IS ++S DS+ + +AS K+W V ++V+T +GH V + F+P +
Sbjct: 86 GHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSN-- 143
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
+ S + D +V++W ++ + H +P V+ + F+ G + + +D + R+
Sbjct: 144 ---LIVSGSFDENVRIWDVNTGECTKMISAHSDP--VTGVHFNRDGTLVVSGSYDGTVRI 198
Query: 269 -DTP---LANLEGHEPFR-VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHG 322
DT L N E + VS +KF P+G+F+ D++ RLW N ++ L GH
Sbjct: 199 WDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHK 258
Query: 323 KPVYCM--SFQGD-GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379
YC+ +F G + TG D +++L+T + L GH V +V P +
Sbjct: 259 NEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENII 318
Query: 380 ATGS--EDNAVKIW 391
A+G+ +D +VKIW
Sbjct: 319 ASGALEKDRSVKIW 332
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 245 (91.3 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 67/234 (28%), Positives = 116/234 (49%)
Query: 193 HDCNV-GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
H ++ G + PS+ + + D +V ++ + LA L+GH +V+ + FH
Sbjct: 217 HSASIPGILALDLCPSD--TNKILTGGADKNVVVFDKSTEQILATLKGHTK-KVTSVVFH 273
Query: 252 PSGRFLGTCCWDHSWRL-DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 306
PS + + D + R+ P + + HE V+ + H +G +L + D W
Sbjct: 274 PSQELVFSASPDATIRIWSVPNTSCVQVVRAHES-AVTGLSLHATGDYLLSSSDDQYWAF 332
Query: 307 WDLNQGQEV--LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
D+ G+ + + E G + C F DG + TG +D+ ++WDL+ + GH
Sbjct: 333 SDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTD 418
+ S+ FS +GY+LAT ++D++VK+WDLRK + K T L N+ V SL+ D
Sbjct: 393 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK--TLQLDNNFEVKSLIFD 444
Score = 194 (73.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
+++ T +GH V ++ FHP S+ V S + D ++++WS+ + + + HE
Sbjct: 255 QILATLKGHTKKVTSVVFHP--SQELVFS---ASPDATIRIWSVPNTSCVQVVRAHES-A 308
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL-----EGHEPFRVSRIKFHPSGRFLGTC 298
V+ + H +G +L + D W D + + ++ +FHP G GT
Sbjct: 309 VTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTG 368
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
D ++WDL + V + GH P+ ++F +G +AT D+ ++WDLR +
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 359 FLE-GHLKSVFSVDFSPDGYHLATGSEDNAVKI 390
L+ + V S+ F G +LA G D + I
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYI 461
Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 62/251 (24%), Positives = 101/251 (40%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ ++ F P + V +AS ++W+VP VQ R H+ V + H + G
Sbjct: 262 GHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLH---ATG 318
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP-FRVSRIKFHPSGRFLGTCCWDHS--- 265
L S + D + L + ++ +FHP G GT D
Sbjct: 319 DY--LLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKI 376
Query: 266 WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHG 322
W L T +AN GH ++ I F +G +L T D S +LWDL + + Q +
Sbjct: 377 WDLKERTNVANFPGHSG-PITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
V + F G+ +A GG D +++ + I+ H V F +A+
Sbjct: 436 FEVKSLIFDQSGTYLALGGTDV--QIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIAST 493
Query: 383 SEDNAVKIWDL 393
D ++K + L
Sbjct: 494 GMDRSLKFYSL 504
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 245 (91.3 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 67/234 (28%), Positives = 116/234 (49%)
Query: 193 HDCNV-GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
H ++ G + PS+ + + D +V ++ + LA L+GH +V+ + FH
Sbjct: 217 HSASIPGILALDLCPSD--TNKILTGGADKNVVVFDKSTEQILATLKGHTK-KVTSVVFH 273
Query: 252 PSGRFLGTCCWDHSWRL-DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 306
PS + + D + R+ P + + HE V+ + H +G +L + D W
Sbjct: 274 PSQELVFSASPDATIRIWSVPNTSCVQVVRAHES-AVTGLSLHATGDYLLSSSDDQYWAF 332
Query: 307 WDLNQGQEV--LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
D+ G+ + + E G + C F DG + TG +D+ ++WDL+ + GH
Sbjct: 333 SDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTD 418
+ S+ FS +GY+LAT ++D++VK+WDLRK + K T L N+ V SL+ D
Sbjct: 393 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK--TLQLDNNFEVKSLIFD 444
Score = 194 (73.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
+++ T +GH V ++ FHP S+ V S + D ++++WS+ + + + HE
Sbjct: 255 QILATLKGHTKKVTSVVFHP--SQELVFS---ASPDATIRIWSVPNTSCVQVVRAHES-A 308
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL-----EGHEPFRVSRIKFHPSGRFLGTC 298
V+ + H +G +L + D W D + + ++ +FHP G GT
Sbjct: 309 VTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTG 368
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
D ++WDL + V + GH P+ ++F +G +AT D+ ++WDLR +
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 359 FLE-GHLKSVFSVDFSPDGYHLATGSEDNAVKI 390
L+ + V S+ F G +LA G D + I
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYI 461
Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 62/251 (24%), Positives = 101/251 (40%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ ++ F P + V +AS ++W+VP VQ R H+ V + H + G
Sbjct: 262 GHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLH---ATG 318
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP-FRVSRIKFHPSGRFLGTCCWDHS--- 265
L S + D + L + ++ +FHP G GT D
Sbjct: 319 DY--LLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKI 376
Query: 266 WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHG 322
W L T +AN GH ++ I F +G +L T D S +LWDL + + Q +
Sbjct: 377 WDLKERTNVANFPGHSG-PITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
V + F G+ +A GG D +++ + I+ H V F +A+
Sbjct: 436 FEVKSLIFDQSGTYLALGGTDV--QIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIAST 493
Query: 383 SEDNAVKIWDL 393
D ++K + L
Sbjct: 494 GMDRSLKFYSL 504
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 245 (91.3 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 67/234 (28%), Positives = 116/234 (49%)
Query: 193 HDCNV-GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
H ++ G + PS+ + + D +V ++ + LA L+GH +V+ + FH
Sbjct: 217 HSASIPGILALDLCPSD--TNKILTGGADKNVVVFDKSTEQILATLKGHTK-KVTSVVFH 273
Query: 252 PSGRFLGTCCWDHSWRL-DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 306
PS + + D + R+ P + + HE V+ + H +G +L + D W
Sbjct: 274 PSQELVFSASPDATIRIWSVPNTSCVQVVRAHES-AVTGLSLHATGDYLLSSSDDQYWAF 332
Query: 307 WDLNQGQEV--LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
D+ G+ + + E G + C F DG + TG +D+ ++WDL+ + GH
Sbjct: 333 SDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTD 418
+ S+ FS +GY+LAT ++D++VK+WDLRK + K T L N+ V SL+ D
Sbjct: 393 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK--TLQLDNNFEVKSLIFD 444
Score = 194 (73.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
+++ T +GH V ++ FHP S+ V S + D ++++WS+ + + + HE
Sbjct: 255 QILATLKGHTKKVTSVVFHP--SQELVFS---ASPDATIRIWSVPNTSCVQVVRAHES-A 308
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL-----EGHEPFRVSRIKFHPSGRFLGTC 298
V+ + H +G +L + D W D + + ++ +FHP G GT
Sbjct: 309 VTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTG 368
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
D ++WDL + V + GH P+ ++F +G +AT D+ ++WDLR +
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 359 FLE-GHLKSVFSVDFSPDGYHLATGSEDNAVKI 390
L+ + V S+ F G +LA G D + I
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYI 461
Score = 168 (64.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 62/251 (24%), Positives = 101/251 (40%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ ++ F P + V +AS ++W+VP VQ R H+ V + H + G
Sbjct: 262 GHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLH---ATG 318
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP-FRVSRIKFHPSGRFLGTCCWDHS--- 265
L S + D + L + ++ +FHP G GT D
Sbjct: 319 DY--LLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKI 376
Query: 266 WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHG 322
W L T +AN GH ++ I F +G +L T D S +LWDL + + Q +
Sbjct: 377 WDLKERTNVANFPGHSG-PITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
V + F G+ +A GG D +++ + I+ H V F +A+
Sbjct: 436 FEVKSLIFDQSGTYLALGGTDV--QIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIAST 493
Query: 383 SEDNAVKIWDL 393
D ++K + L
Sbjct: 494 GMDRSLKFYSL 504
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 246 (91.7 bits), Expect = 5.7e-18, P = 5.7e-18
Identities = 82/260 (31%), Positives = 116/260 (44%)
Query: 146 CSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203
C Q G + S+S DS+ +A+AS K+W L T GH V ++ F
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIF- 346
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
S + L + A D +VK+W + LEGH + S I H S + L + D
Sbjct: 347 ---SHDS--RLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS-QLLASASDD 400
Query: 264 HSWRL-DTPLANL----EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
+ ++ DT +L EGH + S I H S + L + D + ++WD G
Sbjct: 401 STVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS-QLLASASDDSTVKIWDTGTGSLQHTL 459
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
EGH V + F D ++A+ D R+WD G LEGH V SV FS D
Sbjct: 460 EGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRL 519
Query: 379 LATGSEDNAVKIWDLRKRRL 398
LA+ S D V+IWD+ R L
Sbjct: 520 LASASNDQTVRIWDIEARSL 539
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 224 (83.9 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 64/245 (26%), Positives = 114/245 (46%)
Query: 163 DSQHVATASWSGLCKLWTVPE--CELVQTFRGHDCNVGAIEF-HPLPSEGAVCSLASCAQ 219
+S+ V T S L K+W + +L + GH V +++ H LP AS +
Sbjct: 31 NSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISHTLPIA------ASSSL 84
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-------PL 272
D ++LW LD + +++ P + F P ++L T H +++
Sbjct: 85 DAHIRLWDLDNGKQIKSIDAG-PVDAWTLAFSPDSQYLAT--GTHVGKVNIFGVESGKKE 141
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQ 331
+L+ F +S I + P G++L + D ++D+ G+ +LH EGH P+ ++F
Sbjct: 142 YSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFS 199
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
D ++ T D + +++D++ L GH V +V F PD H + S D +VK+W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 392 DLRKR 396
D+ R
Sbjct: 260 DVGTR 264
Score = 177 (67.4 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 53/214 (24%), Positives = 99/214 (46%)
Query: 191 RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS-LDKDTPLA-NLEGHEPFRVSRI 248
+ HD + ++ + E + ++ + + D VK+W D+ L +LEGH+ VS
Sbjct: 13 QAHDDAIWSVAWGTNKKENSE-TVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVD 71
Query: 249 KFH--PSGRFLGTCCWDHSWRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304
H P W LD + +++ P + F P ++L T
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAG-PVDAWTLAFSPDSQYLATGTHVGKV 130
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
++ + G++ + GK + +++ DG +A+G +D ++D+ TG+ + LEGH
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ S+ FSPD L T S+D +KI+D++ L
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/133 (27%), Positives = 67/133 (50%)
Query: 267 RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVY 326
RLD + LEGH+ VS + + + D RLWDL+ G+++ + +
Sbjct: 53 RLDLQWS-LEGHQLGVVS-VDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAW 110
Query: 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
++F D +ATG ++ + +G+ L+ K + S+ +SPDG +LA+G+ D
Sbjct: 111 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 387 AVKIWDLRKRRLL 399
+ I+D+ +LL
Sbjct: 171 IINIFDIATGKLL 183
Score = 135 (52.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 50/231 (21%), Positives = 99/231 (42%)
Query: 168 ATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227
A++S +LW + + +++ + + F P S+ LA+ G V ++
Sbjct: 80 ASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSP-DSQ----YLATGTHVGKVNIFG 134
Query: 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTP--LANLEGHE-PF 281
++ +L+ F +S I + P G++L + D + + + T L LEGH P
Sbjct: 135 VESGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
R + F P + L T D +++D+ GH V ++F D + +
Sbjct: 194 R--SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS 251
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
D +VWD+ T C+ H V+ V ++ +G + + +D + ++D
Sbjct: 252 SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 54/198 (27%), Positives = 87/198 (43%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSPDSQ++AT + G ++ V + + + +I + P +G LAS A
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP---DGKY--LASGA 167
Query: 219 QDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL- 275
DG + ++ + L LEGH P R + F P + L T D ++ D ANL
Sbjct: 168 IDGIINIFDIATGKLLHTLEGHAMPIR--SLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 276 ---EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
GH + V + F P + D S ++WD+ V H V+ + + G
Sbjct: 226 GTLSGHASW-VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG 284
Query: 333 DGSVVATGGLDAFGRVWD 350
+GS + + G D V+D
Sbjct: 285 NGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 239 (89.2 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 71/250 (28%), Positives = 116/250 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPSE 208
G ++ +FSP +A+ S ++W VP + T FR H V ++ F S+
Sbjct: 21 GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC---SD 76
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC------- 261
G S + + D +VK+W+ + L +L H + V KF P GR + +
Sbjct: 77 GQ--SFVTASDDKTVKVWATHRQKFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKL 133
Query: 262 WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
WD S R + + E H F V+ + FHPSG + D++ ++WD+ + + H + H
Sbjct: 134 WDKSSR-ECVHSYCE-HGGF-VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 190
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
V +SF G+ + T D+ ++ DL GR + L GH +V FS G + A+
Sbjct: 191 SAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 250
Query: 382 GSEDNAVKIW 391
G D V +W
Sbjct: 251 GGSDEQVMVW 260
Score = 206 (77.6 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 66/228 (28%), Positives = 101/228 (44%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
+W + F GH V + F P G + LAS ++D +V++W +
Sbjct: 7 VWHMKPQSRAYRFTGHKDAVTCVNFSP---SGHL--LASGSRDKTVRIWVPNVKGESTVF 61
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSG 292
H V + F G+ T D + W L +L H + V KF P G
Sbjct: 62 RAHTA-TVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINW-VRCAKFSPDG 119
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQE-GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
R + + D + +LWD +E +H HG V + F G+ +A G+D +VWD+
Sbjct: 120 RLIVSASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 178
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
RT R + + H +V + F P G +L T S D+ +KI DL + RLL
Sbjct: 179 RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLL 226
Score = 186 (70.5 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 51/187 (27%), Positives = 83/187 (44%)
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHE 279
D + +W + + GH+ V+ + F PSG L + D + R+ P N++G
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKD-AVTCVNFSPSGHLLASGSRDKTVRIWVP--NVKGES 58
Query: 280 P-FR-----VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
FR V + F G+ T D + ++W ++ + + H V C F D
Sbjct: 59 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPD 118
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G ++ + D ++WD + C+ H V VDF P G +A DN VK+WD+
Sbjct: 119 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 178
Query: 394 RKRRLLK 400
R RLL+
Sbjct: 179 RTHRLLQ 185
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 246 (91.7 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 79/261 (30%), Positives = 123/261 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
GD S C FSPD +++AT + ++W + + F GH+ ++ +++F +G
Sbjct: 345 GDLYIRSVC-FSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDF---ARDG 400
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
++AS + D +V+LW ++ T L + V+ + P +++ D S W
Sbjct: 401 R--TIASGSGDRTVRLWDIENGTALTVFTIEDG--VTTVAISPDTKYVAAGSLDKSVRVW 456
Query: 267 RLDT--PLANLEGHEPFR--VSRIKFHPSGRFLGTCCWDHSWRLWDL--------NQGQE 314
L P+ LEG + + V + F P+GR L T D + +LW+L NQG +
Sbjct: 457 DLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSK 516
Query: 315 ----VLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV 370
V EGH V ++ D V +G D + WD RTG + L+GH SV SV
Sbjct: 517 GGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISV 576
Query: 371 DFSPDGYHLATGSEDNAVKIW 391
SP G ATGS D +IW
Sbjct: 577 APSPTGGFFATGSGDMRARIW 597
Score = 198 (74.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 55/162 (33%), Positives = 78/162 (48%)
Query: 245 VSRIKFHPSGRFLGTCCWDHS---WRLDTPLANLE--GHEPFRVSRIKFHPSGRFLGTCC 299
+ + F P G++L T D W + T ++ GHE + + F GR + +
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQ-DIYSLDFARDGRTIASGS 407
Query: 300 WDHSWRLWDLNQGQEV-LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
D + RLWD+ G + + G V ++ D VA G LD RVWDL G +
Sbjct: 408 GDRTVRLWDIENGTALTVFTIEDG--VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVE 465
Query: 359 FLEG---HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
LEG H SV+SV FSP+G L TGS D +K+W+L R
Sbjct: 466 RLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPR 507
Score = 182 (69.1 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 44/132 (33%), Positives = 74/132 (56%)
Query: 268 LDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV-LHQEGHGKP-- 324
LD L + HE V ++F G+++ T C + S +++D+N G++V + Q+ +
Sbjct: 288 LDVDLVHTLQHESV-VCCVRFSADGKYVATGC-NRSAQIFDVNTGEKVCVLQDDNADTTG 345
Query: 325 -VYCMS--FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+Y S F DG +ATG D RVWD+ T + GH + ++S+DF+ DG +A+
Sbjct: 346 DLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIAS 405
Query: 382 GSEDNAVKIWDL 393
GS D V++WD+
Sbjct: 406 GSGDRTVRLWDI 417
Score = 176 (67.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 46/172 (26%), Positives = 75/172 (43%)
Query: 231 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA---------NLEGHEPF 281
D L + HE V ++F G+++ T C + D N +
Sbjct: 289 DVDLVHTLQHESV-VCCVRFSADGKYVATGCNRSAQIFDVNTGEKVCVLQDDNADTTGDL 347
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
+ + F P G++L T D R+WD+ + GH + +Y + F DG +A+G
Sbjct: 348 YIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGS 407
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
D R+WD+ G + V +V SPD ++A GS D +V++WDL
Sbjct: 408 GDRTVRLWDIENGTALTVFTIE-DGVTTVAISPDTKYVAAGSLDKSVRVWDL 458
Score = 175 (66.7 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 43/127 (33%), Positives = 62/127 (48%)
Query: 283 VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG---HGKPVYCMSFQGDGSVVAT 339
V+ + P +++ D S R+WDL QG V EG H VY ++F +G + T
Sbjct: 432 VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVT 491
Query: 340 GGLDAFGRVWDLRT------------GRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
G LD ++W+L T GRC+ EGH V SV +PD + +GS+D
Sbjct: 492 GSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRG 551
Query: 388 VKIWDLR 394
V+ WD R
Sbjct: 552 VQFWDPR 558
Score = 162 (62.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 60/230 (26%), Positives = 93/230 (40%)
Query: 139 LTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVG 198
+T+ +I G + I F+ D + +A+ S +LW + + F D V
Sbjct: 375 ITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIED-GVT 433
Query: 199 AIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR--VSRIKFHPSGRF 256
+ P A SL D SV++W L + P+ LEG + + V + F P+GR
Sbjct: 434 TVAISPDTKYVAAGSL-----DKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRD 488
Query: 257 LGTCCWDHS---WRLDTPLANL--------------EGHEPFRVSRIKFHPSGRFLGTCC 299
L T D + W L TP N+ EGH F +S + P +++ +
Sbjct: 489 LVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLS-VALTPDNQWVMSGS 547
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
D + WD G L +GH V ++ G ATG D R+W
Sbjct: 548 KDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 33/92 (35%), Positives = 52/92 (56%)
Query: 314 EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE-------GHLKS 366
+++H H V C+ F DG VATG + +++D+ TG + L+ G L
Sbjct: 291 DLVHTLQHESVVCCVRFSADGKYVATG-CNRSAQIFDVNTGEKVCVLQDDNADTTGDLY- 348
Query: 367 VFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ SV FSPDG +LATG+ED +++WD+ R +
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTI 380
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 241 (89.9 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 69/255 (27%), Positives = 118/255 (46%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTV-PECELVQTFRGHDCNVGAI-EFHPLPSEGAVCSLA 215
C F P+ +A+A + L LW V +C+ T +GH GA+ E H ++G++ L
Sbjct: 72 CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHS---GAVMELH-YNTDGSM--LF 125
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPL 272
S + D +V +W + + L+GH F S + + T D + W +
Sbjct: 126 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 185
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
A ++V + F+ + + + D+ ++WDL Q + GH V +S
Sbjct: 186 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 245
Query: 333 DGSVVATGGLDAFGRVWDLRT----GRCIMFLEGHL----KSVFSVDFSPDGYHLATGSE 384
+GS + + +D RVWD+R RC+ +G++ K++ +SPDG +A GS
Sbjct: 246 EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 305
Query: 385 DNAVKIWDLRKRRLL 399
D V +WD RR+L
Sbjct: 306 DRFVYVWDTTSRRIL 320
Score = 205 (77.2 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 61/239 (25%), Positives = 108/239 (45%)
Query: 182 PECELVQT----FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP-LAN 236
P C +Q GH+ V +FHP G+ +LAS D + LW++ D A
Sbjct: 50 PRCSSLQAPIMLLSGHEGEVYCCKFHP---NGS--TLASAGFDRLILLWNVYGDCDNYAT 104
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L+GH V + ++ G L + D + W +T + L+GH F S
Sbjct: 105 LKGHSG-AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
+ + T D + +LWD+ + + + + V ++F + +GG+D +VWDL
Sbjct: 164 PQLVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 222
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
R + + GH SV + S +G +L + + DN V++WD+R + C ++ ++
Sbjct: 223 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 281
Score = 154 (59.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 58/251 (23%), Positives = 104/251 (41%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
Y + G + + ++ D + +AS +W E V+ +GH V +
Sbjct: 102 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC---- 157
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
P+ + + + DG+VKLW + K + + ++V + F+ + + + D+
Sbjct: 158 YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQN--TYQVLAVTFNDTSDQIISGGIDN 215
Query: 265 S---WRL-DTPLA-NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN------QGQ 313
W L L + GH V+ + G +L + D++ R+WD+ +
Sbjct: 216 DIKVWDLRQNKLTYTMRGHAD-SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 274
Query: 314 EVLHQEGHG--KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
++ H K + S+ DGS +A G D F VWD + R + L GH S+ V
Sbjct: 275 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVA 334
Query: 372 FSPDGYHLATG 382
F PD + TG
Sbjct: 335 FHPDEPIIETG 345
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 239 (89.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 71/250 (28%), Positives = 116/250 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPSE 208
G ++ +FSP +A+ S ++W VP + T FR H V ++ F S+
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC---SD 114
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC------- 261
G S + + D +VK+W+ + L +L H + V KF P GR + +
Sbjct: 115 GQ--SFVTASDDKTVKVWATHRQKFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKL 171
Query: 262 WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
WD S R + + E H F V+ + FHPSG + D++ ++WD+ + + H + H
Sbjct: 172 WDKSSR-ECVHSYCE-HGGF-VTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 228
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
V +SF G+ + T D+ ++ DL GR + L GH +V FS G + A+
Sbjct: 229 SAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 382 GSEDNAVKIW 391
G D V +W
Sbjct: 289 GGSDEQVMVW 298
Score = 224 (83.9 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 71/256 (27%), Positives = 113/256 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G ++ FS +++ +A+ S +W + F GH V + F P G
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP---SG 73
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LAS ++D +V++W + H V + F G+ T D + W
Sbjct: 74 HL--LASGSRDKTVRIWVPNVKGESTVFRAHTA-TVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GHGK 323
L +L H + V KF P GR + + D + +LWD +E +H HG
Sbjct: 131 ATHRQKFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKLWD-KSSRECVHSYCEHGG 188
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V + F G+ +A G+D +VWD+RT R + + H +V + F P G +L T S
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITAS 248
Query: 384 EDNAVKIWDLRKRRLL 399
D+ +KI DL + RLL
Sbjct: 249 SDSTLKILDLMEGRLL 264
Score = 202 (76.2 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 60/221 (27%), Positives = 98/221 (44%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH V ++F + LAS + D + +W + + GH+ V
Sbjct: 11 LERHFKGHRDAVTCVDFSINTKQ-----LASGSMDSCLMVWHMKPQSRAYRFTGHKD-AV 64
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEP-FR-----VSRIKFHPSGRFLGTCC 299
+ + F PSG L + D + R+ P N++G FR V + F G+ T
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWVP--NVKGESTVFRAHTATVRSVHFCSDGQSFVTAS 122
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + ++W ++ + + H V C F DG ++ + D ++WD + C+
Sbjct: 123 DDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHS 182
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
H V VDF P G +A DN VK+WD+R RLL+
Sbjct: 183 YCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 223
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 242 (90.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 43/121 (35%), Positives = 69/121 (57%)
Query: 271 PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSF 330
P+A + GH+ +V+ + F P G + + WD++ +LW+ G+ + GH PVY SF
Sbjct: 405 PIARMIGHQK-QVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSF 463
Query: 331 QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKI 390
D ++ T D +VW++RTG+ L GH V+ VD+SPDG + +G D AV++
Sbjct: 464 SADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRL 523
Query: 391 W 391
W
Sbjct: 524 W 524
Score = 200 (75.5 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 64/238 (26%), Positives = 108/238 (45%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+ +AS ++WTV GH +V + + G V + + D +VK+W
Sbjct: 259 LVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYT---ASHDKTVKVW 315
Query: 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFL-GTCCWDHSWRLDTPLANLEGHEPFRVSR 285
K T L +L+ H + V+ + S F+ T +DH+ + R +
Sbjct: 316 DAVKGTLLHDLKSHAHW-VNHLAL--STDFVCRTGFFDHTKTVPATAEEKTAKAKERYEK 372
Query: 286 IKFHPSGRF---LGTCCWDHSWRLWD-LNQGQE-VLHQEGHGKPVYCMSFQGDGSVVATG 340
G+ L + D + L+D LN G + + GH K V ++F DGS++A+
Sbjct: 373 AA-RVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASA 431
Query: 341 GLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
G D ++W+ R G+ I L GH+ V+ FS D L T S+D +K+W++R +L
Sbjct: 432 GWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKL 489
Score = 166 (63.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 237 LEGH-EPFRVSRIKFHPSGRFLGTCCWDHSWRL-D----TPLANLEGHEPFRVSRIKFHP 290
+ GH EP ++ S R L T D++ R+ D TP L+GH + V + + P
Sbjct: 148 IPGHGEPILCAQFSPASSAR-LATGSGDNTARIWDAETGTPKHTLKGHAGW-VLGVSWSP 205
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQG-----DGSV-VATGGLD 343
G L TC D + R+WD G++V + +GH K V ++++ DG+ + + D
Sbjct: 206 DGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKD 265
Query: 344 AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP-DGYHLA-TGSEDNAVKIWDLRKRRLL 399
R+W + TGR L GH SV V + +G + T S D VK+WD K LL
Sbjct: 266 FTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLL 323
Score = 146 (56.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 59/215 (27%), Positives = 92/215 (42%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L GH + +F P S LA+ + D + ++W + TP L+GH + V
Sbjct: 144 LAHRIPGHGEPILCAQFSPASS----ARLATGSGDNTARIWDAETGTPKHTLKGHAGW-V 198
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTPL------ANLEGHEPFRVSRIKFHPSGRFL-GT- 297
+ + P G L TC D + R+ P + L+GH + V I + P + GT
Sbjct: 199 LGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKW-VQGIAWEPLHLWRDGTP 257
Query: 298 ----CCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSF-QGDGS-VVATGGLDAFGRVWDL 351
D + R+W +N G+ GH V C+ + G+G+ VV T D +VWD
Sbjct: 258 RLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDA 317
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
G + L+ H V + S D + TG D+
Sbjct: 318 VKGTLLHDLKSHAHWVNHLALSTD-FVCRTGFFDH 351
Score = 139 (54.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 32/120 (26%), Positives = 61/120 (50%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
+G + +++ +FSPD +A+A W KLW + + + T RGH V F ++
Sbjct: 410 IGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFS---AD 466
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
+ L + ++D ++K+W++ +L GHE V + + P G+ +G+ D + RL
Sbjct: 467 SRL--LVTASKDTTLKVWNVRTGKLATDLPGHED-EVYGVDWSPDGQRVGSGGRDKAVRL 523
Score = 102 (41.0 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 55/211 (26%), Positives = 90/211 (42%)
Query: 150 GDTRPISYCSFSP-DSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
G PI FSP S +AT S ++W T +GH V + + P +
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSP---D 206
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLAN-LEGHEPFRVSRIKFHPSGRFL-GT-----CC 261
G LA+C+ D +V++W + + + L+GH + V I + P + GT
Sbjct: 207 GT--RLATCSMDKTVRIWDPETGKQVGSELKGHAKW-VQGIAWEPLHLWRDGTPRLVSAS 263
Query: 262 WDHS---WRLDTPLAN--LEGHEPFRVSRIKFHPSGRFLG---TCCWDHSWRLWDLNQGQ 313
D + W ++T L GH+ VS +++ +G G T D + ++WD +G
Sbjct: 264 KDFTARIWTVNTGRTEHVLSGHKG-SVSCVRWG-AGNGTGVVYTASHDKTVKVWDAVKGT 321
Query: 314 EVLHQ-EGHGKPVYCMSFQGDGSVVATGGLD 343
+LH + H V ++ D V TG D
Sbjct: 322 -LLHDLKSHAHWVNHLALSTD-FVCRTGFFD 350
Score = 89 (36.4 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
GH K V V FSPDG +A+ DNA K+W+ R + +
Sbjct: 411 GHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFI 448
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 63/245 (25%), Positives = 114/245 (46%)
Query: 163 DSQHVATASWSGLCKLWTVPE--CELVQTFRGHDCNVGAIEF-HPLPSEGAVCSLASCAQ 219
+S+ V T S L K+W + +L + GH V +++ H LP AS +
Sbjct: 31 NSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIA------ASSSL 84
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-------PL 272
D ++LW L+ + +++ P + F P ++L T H +++
Sbjct: 85 DAHIRLWDLENGKQIKSIDAG-PVDAWTLAFSPDSQYLAT--GTHVGKVNIFGVESGKKE 141
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQ 331
+L+ F +S I + P G++L + D ++D+ G+ +LH EGH P+ ++F
Sbjct: 142 YSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFS 199
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
D ++ T D + +++D++ L GH V +V F PD H + S D +VK+W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 392 DLRKR 396
D+ R
Sbjct: 260 DVGTR 264
Score = 172 (65.6 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 52/214 (24%), Positives = 99/214 (46%)
Query: 191 RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL-DKDTPLA-NLEGHEPFRVSRI 248
+ HD + ++ + E + ++ + + D VK+W D+ L +LEGH+ VS
Sbjct: 13 QAHDDAIWSVAWGTNKKENSE-TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVD 71
Query: 249 KFH--PSGRFLGTCCWDHSWRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304
H P W L+ + +++ P + F P ++L T
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAG-PVDAWTLAFSPDSQYLATGTHVGKV 130
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
++ + G++ + GK + +++ DG +A+G +D ++D+ TG+ + LEGH
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ S+ FSPD L T S+D +KI+D++ L
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 37/133 (27%), Positives = 66/133 (49%)
Query: 267 RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVY 326
RLD + LEGH+ VS + + + D RLWDL G+++ + +
Sbjct: 53 RLDLQWS-LEGHQLGVVS-VDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW 110
Query: 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
++F D +ATG ++ + +G+ L+ K + S+ +SPDG +LA+G+ D
Sbjct: 111 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 387 AVKIWDLRKRRLL 399
+ I+D+ +LL
Sbjct: 171 IINIFDIATGKLL 183
Score = 123 (48.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 52/189 (27%), Positives = 84/189 (44%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSPDSQ++AT + G ++ V + + + +I + P +G LAS A
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP---DGKY--LASGA 167
Query: 219 QDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL- 275
DG + ++ + L LEGH P R + F P + L T D ++ D ANL
Sbjct: 168 IDGIINIFDIATGKLLHTLEGHAMPIR--SLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 276 ---EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
GH + V + F P + D S ++WD+ V H V+ + + G
Sbjct: 226 GTLSGHASW-VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG 284
Query: 333 DGS-VVATG 340
+GS +V+ G
Sbjct: 285 NGSKIVSVG 293
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 48/215 (22%), Positives = 91/215 (42%)
Query: 168 ATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227
A++S +LW + + +++ + + F P S+ LA+ G V ++
Sbjct: 80 ASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP-DSQ----YLATGTHVGKVNIFG 134
Query: 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTP--LANLEGHE-PF 281
++ +L+ F +S I + P G++L + D + + + T L LEGH P
Sbjct: 135 VESGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
R + F P + L T D +++D+ GH V ++F D + +
Sbjct: 194 R--SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS 251
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG 376
D +VWD+ T C+ H V+ V ++ +G
Sbjct: 252 SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNG 286
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 223 (83.6 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 63/241 (26%), Positives = 114/241 (47%)
Query: 164 SQHVATASWSGLCKLWTVPE--CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221
S+ V + S L K+W + EL T GH V +++ P G + +AS + D
Sbjct: 32 SELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSP---SGNI--MASSSLDA 86
Query: 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTPLA--NLE 276
++LW L+ + ++ P + F P + L T + + ++T +L+
Sbjct: 87 HIRLWDLESGKQIRAIDAG-PVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLD 145
Query: 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGS 335
F +S I + P G++L + D ++D+ G+ +LH EGH P+ ++F D
Sbjct: 146 TRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDSQ 203
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
++ T D + ++++++ L GH V +V FSPD H + S D +VK+WD+
Sbjct: 204 LLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSA 263
Query: 396 R 396
R
Sbjct: 264 R 264
Score = 184 (69.8 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 51/186 (27%), Positives = 91/186 (48%)
Query: 220 DGSVKLWSL-DKDTPL-ANLEGHEPFRVSRIKFHPSGRFLGTCCWD-HS--WRLDT--PL 272
D VK+W D+ L + LEGH+ VS + PSG + + D H W L++ +
Sbjct: 41 DDLVKVWKWSDERLELQSTLEGHQLGVVS-VDVSPSGNIMASSSLDAHIRLWDLESGKQI 99
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
++ P + F P + L T ++ + G++ + GK + +++
Sbjct: 100 RAIDAG-PVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP 158
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
DG +A+G +D ++D+ TG+ + LEGH + S+ FSPD L T S+D +KI++
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYE 218
Query: 393 LRKRRL 398
++ L
Sbjct: 219 VQHASL 224
Score = 162 (62.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 41/138 (29%), Positives = 70/138 (50%)
Query: 262 WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
W RL+ + LEGH+ VS + PSG + + D RLWDL G+++ +
Sbjct: 49 WSDE-RLELQ-STLEGHQLGVVS-VDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAG 105
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ ++F D +ATG ++ + TG+ L+ K + S+ +SPDG +LA+
Sbjct: 106 PVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 382 GSEDNAVKIWDLRKRRLL 399
G+ D + I+D+ +LL
Sbjct: 166 GAIDGIINIFDIATGKLL 183
Score = 153 (58.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 53/239 (22%), Positives = 107/239 (44%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
SP +A++S +LW + + ++ + ++ F P S+ LA+ +
Sbjct: 73 SPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSP-DSQ----HLATGSHV 127
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTP--LANL 275
G V ++ ++ +L+ F +S I + P G++L + D + + + T L L
Sbjct: 128 GKVNIFGVETGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTL 186
Query: 276 EGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
EGH P R + F P + L T D +++++ GHG V ++F D
Sbjct: 187 EGHAMPIR--SLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDD 244
Query: 335 SVVATGGLDAFGRVWDLRTGRCI-MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
+ + D +VWD+ C+ FL+ H V+ V ++ +G + + ++D + ++D
Sbjct: 245 THFVSSSSDKSVKVWDVSARTCVHTFLD-HQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 56/209 (26%), Positives = 90/209 (43%)
Query: 151 DTRPISYCS--FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
D P+ S FSPDSQH+AT S G ++ V + + + +I + P +
Sbjct: 103 DAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP---D 159
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWR 267
G LAS A DG + ++ + L LEGH P R + F P + L T D +
Sbjct: 160 GKY--LASGAIDGIINIFDIATGKLLHTLEGHAMPIR--SLTFSPDSQLLVTASDDGYIK 215
Query: 268 L----DTPLA-NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GH 321
+ LA L GH + V + F P + D S ++WD++ + +H H
Sbjct: 216 IYEVQHASLAATLSGHGSW-VLNVAFSPDDTHFVSSSSDKSVKVWDVS-ARTCVHTFLDH 273
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
V+ + + +GS + + D V+D
Sbjct: 274 QDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G PI +FSPDSQ + TAS G K++ V L T GH V + F P +
Sbjct: 188 GHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTH- 246
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG 254
S + D SVK+W + T + H+ +V +K++ +G
Sbjct: 247 ----FVSSSSDKSVKVWDVSARTCVHTFLDHQD-QVWGVKYNKNG 286
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 241 (89.9 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 71/265 (26%), Positives = 122/265 (46%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ D +AT S+ G ++WT + L T H + A++++ +
Sbjct: 231 VPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWN---KK 286
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 287 GNY--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQNNTTF-ASCSTDMCIHV 342
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
RL D P+ +GH V+ IK+ PSG L +C D + ++W + Q V + H K
Sbjct: 343 CRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSK 401
Query: 324 PVYCMSFQ--GDGS-------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374
+Y + + G G+ ++A+ D+ R+WD+ G CI L H + V+SV FSP
Sbjct: 402 EIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSP 461
Query: 375 DGYHLATGSEDNAVKIWDLRKRRLL 399
DG +LA+GS D V IW+ + L+
Sbjct: 462 DGKYLASGSFDKCVHIWNTQSGTLV 486
Score = 212 (79.7 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 56/197 (28%), Positives = 97/197 (49%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L D P+ +GH V+ IK+ PSG L +C D + W +
Sbjct: 330 TFASCSTDMCIHVCRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMK 388
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
DT + +L+ H + IK+ P+G L + +D + RLWD+++G +
Sbjct: 389 QDTCVHDLQAHSK-EIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTL 447
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
H +PVY ++F DG +A+G D +W+ ++G + G +F V ++ G
Sbjct: 448 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYRG-TGGIFEVCWNARGDK 506
Query: 379 LATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 507 VGASASDGSVCVLDLRK 523
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 51/245 (20%), Positives = 110/245 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE------CELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R GHD
Sbjct: 176 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPSNK 235
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ S+G + LA+ + DG ++W+ +D LA+ G + +K++ G
Sbjct: 236 DVTSLDWN---SDGTL--LATGSYDGFARIWT--EDGNLASTLGQHKGPIFALKWNKKGN 288
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
++ + D + + D + PF + + + + F +C D + L
Sbjct: 289 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGC 347
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ V +GH V + + G ++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 348 DRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIK 407
Query: 372 FSPDG 376
+SP G
Sbjct: 408 WSPTG 412
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG------QEVL-H---QEGHGKP 324
L GHE V ++P L + D + R+W+LN+ Q VL H + GH P
Sbjct: 174 LRGHES-EVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVP 232
Query: 325 ----VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
V + + DG+++ATG D F R+W G L H +F++ ++ G ++
Sbjct: 233 SNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYIL 291
Query: 381 TGSEDNAVKIWD 392
+ D IWD
Sbjct: 292 SAGVDKTTIIWD 303
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 240 (89.5 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 70/265 (26%), Positives = 120/265 (45%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ D +AT S+ G ++WT + L T H + A++++ +
Sbjct: 235 VPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWN---KK 290
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 291 GNY--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQNNTTF-ASCSTDMCIHV 346
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
RL D P+ +GH V+ IK+ PSG L +C D + ++W + Q V + H K
Sbjct: 347 CRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSK 405
Query: 324 PVYCMSFQGDGS---------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374
+Y + + G ++A+ D+ R+WD+ G CI L H + V+SV FSP
Sbjct: 406 EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP 465
Query: 375 DGYHLATGSEDNAVKIWDLRKRRLL 399
DG +LA+GS D V IW+ + L+
Sbjct: 466 DGKYLASGSFDKCVHIWNTQSGSLV 490
Score = 206 (77.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 55/197 (27%), Positives = 95/197 (48%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L D P+ +GH V+ IK+ PSG L +C D + W +
Sbjct: 334 TFASCSTDMCIHVCRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMK 392
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
D + +L+ H + IK+ P+G L + +D + RLWD+ +G +
Sbjct: 393 QDACVHDLQAHSK-EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTL 451
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
H +PVY ++F DG +A+G D +W+ ++G + G +F V ++ G
Sbjct: 452 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDK 510
Query: 379 LATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 511 VGASASDGSVCVLDLRK 527
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 51/245 (20%), Positives = 110/245 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE------CELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R GHD
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 239
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ S+G + LA+ + DG ++W+ +D LA+ G + +K++ G
Sbjct: 240 DVTSLDWN---SDGTL--LATGSYDGFARIWT--EDGNLASTLGQHKGPIFALKWNKKGN 292
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
++ + D + + D + PF + + + + F +C D + L
Sbjct: 293 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGC 351
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ V +GH V + + G ++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 352 DRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIK 411
Query: 372 FSPDG 376
+SP G
Sbjct: 412 WSPTG 416
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG------QEVL-H---QEGHGKP 324
L GHE V ++P L + D + R+W+LN+ Q VL H + GH P
Sbjct: 178 LRGHES-EVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 236
Query: 325 ----VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
V + + DG+++ATG D F R+W G L H +F++ ++ G ++
Sbjct: 237 SNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYIL 295
Query: 381 TGSEDNAVKIWD 392
+ D IWD
Sbjct: 296 SAGVDKTTIIWD 307
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 240 (89.5 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 70/265 (26%), Positives = 120/265 (45%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ D +AT S+ G ++WT + L T H + A++++ +
Sbjct: 235 VPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWN---KK 290
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 291 GNY--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQNNTTF-ASCSTDMCIHV 346
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
RL D P+ +GH V+ IK+ PSG L +C D + ++W + Q V + H K
Sbjct: 347 CRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSK 405
Query: 324 PVYCMSFQGDGS---------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374
+Y + + G ++A+ D+ R+WD+ G CI L H + V+SV FSP
Sbjct: 406 EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP 465
Query: 375 DGYHLATGSEDNAVKIWDLRKRRLL 399
DG +LA+GS D V IW+ + L+
Sbjct: 466 DGKYLASGSFDKCVHIWNTQSGSLV 490
Score = 206 (77.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 55/197 (27%), Positives = 95/197 (48%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L D P+ +GH V+ IK+ PSG L +C D + W +
Sbjct: 334 TFASCSTDMCIHVCRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMK 392
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
D + +L+ H + IK+ P+G L + +D + RLWD+ +G +
Sbjct: 393 QDACVHDLQAHSK-EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTL 451
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
H +PVY ++F DG +A+G D +W+ ++G + G +F V ++ G
Sbjct: 452 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGDK 510
Query: 379 LATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 511 VGASASDGSVCVLDLRK 527
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 51/245 (20%), Positives = 110/245 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE------CELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R GHD
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 239
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ S+G + LA+ + DG ++W+ +D LA+ G + +K++ G
Sbjct: 240 DVTSLDWN---SDGTL--LATGSYDGFARIWT--EDGNLASTLGQHKGPIFALKWNKKGN 292
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
++ + D + + D + PF + + + + F +C D + L
Sbjct: 293 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGC 351
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ V +GH V + + G ++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 352 DRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIK 411
Query: 372 FSPDG 376
+SP G
Sbjct: 412 WSPTG 416
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG------QEVL-H---QEGHGKP 324
L GHE V ++P L + D + R+W+LN+ Q VL H + GH P
Sbjct: 178 LRGHES-EVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 236
Query: 325 ----VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
V + + DG+++ATG D F R+W G L H +F++ ++ G ++
Sbjct: 237 SNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYIL 295
Query: 381 TGSEDNAVKIWD 392
+ D IWD
Sbjct: 296 SAGVDKTTIIWD 307
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 237 (88.5 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 71/248 (28%), Positives = 114/248 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPSE 208
G ++ FSP + +A++S +LW VP + FR H +V ++ F ++
Sbjct: 58 GHKDAVTCVQFSPSAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFS---AD 113
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
G SL + + D S+KLWS+ + + L H + V +F P G+ + + D + +L
Sbjct: 114 GQ--SLLTASDDQSIKLWSVHRQKIICTLREHNNW-VRCARFSPDGQLMVSVSDDRTVKL 170
Query: 269 -DTPLANLEGH---EPFRVSR-IKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
D L H EP S + FHPS + T D++ R+WD+ + H + H
Sbjct: 171 WDASSRQLI-HTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSA 229
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
V +SF G+ + T D+ ++ DL GR + L GH S V FS G A+
Sbjct: 230 AVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAG 289
Query: 384 EDNAVKIW 391
D V +W
Sbjct: 290 SDQQVMVW 297
Score = 228 (85.3 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 74/259 (28%), Positives = 116/259 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ FSP + +A+ S +W + F GH V ++F P
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSP----- 70
Query: 210 AVCSLASCAQDGSVKLW--SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-- 265
+ LAS ++D +V+LW S+ ++ L H V + F G+ L T D S
Sbjct: 71 SAHLLASSSRDKTVRLWVPSVKGESVL--FRAHTG-SVRSVCFSADGQSLLTASDDQSIK 127
Query: 266 -WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ--EG 320
W + + L H + V +F P G+ + + D + +LWD + Q ++H E
Sbjct: 128 LWSVHRQKIICTLREHNNW-VRCARFSPDGQLMVSVSDDRTVKLWDASSRQ-LIHTFCEP 185
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
G Y + F + +AT D RVWD+RT + + H +V ++ F P G HL
Sbjct: 186 GGYSSY-VDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLL 244
Query: 381 TGSEDNAVKIWDLRKRRLL 399
T S D+ +KI DL + RLL
Sbjct: 245 TASSDSTLKILDLLEGRLL 263
Score = 212 (79.7 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 63/222 (28%), Positives = 106/222 (47%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
L + F+GH + +++F P + +AS + D SV +W++ + GH+ V
Sbjct: 10 LERNFKGHRDAITSLDFSPSGKQ-----IASGSVDASVMVWNMKPQSRAYRFTGHKD-AV 63
Query: 246 SRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEP-FR-----VSRIKFHPSGRFLGTCC 299
+ ++F PS L + D + RL P +++G FR V + F G+ L T
Sbjct: 64 TCVQFSPSAHLLASSSRDKTVRLWVP--SVKGESVLFRAHTGSVRSVCFSADGQSLLTAS 121
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI-M 358
D S +LW +++ + + H V C F DG ++ + D ++WD + + I
Sbjct: 122 DDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHT 181
Query: 359 FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
F E S + VDF P +AT S DN V++WD+R LL+
Sbjct: 182 FCEPGGYSSY-VDFHPSSTCIATASSDNTVRVWDIRTHTLLQ 222
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 235 (87.8 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 57/219 (26%), Positives = 110/219 (50%)
Query: 189 TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR-VSR 247
T GH+ +V + P +A+ + DG++K+WS L GH +R +S+
Sbjct: 49 TLFGHEKSVTCVSVSPNKRW-----IATSSSDGTIKIWSALTFRLECTLFGH--YRGISQ 101
Query: 248 IKFHPSGRFLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 302
+K+ ++L + D + W + + L+GH + VS I F+P G L + WD
Sbjct: 102 VKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNY-VSSIDFNPLGTLLVSGSWDE 160
Query: 303 SWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
+ R+W+L G + H +P+ +S DG++ AT D R+WD+ +G+C+ L
Sbjct: 161 TVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVE 220
Query: 363 HLKSVFS-VDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ S + F+ + +L + ++ +++WD R+ R+++
Sbjct: 221 PINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVR 259
Score = 231 (86.4 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 69/250 (27%), Positives = 118/250 (47%)
Query: 131 RNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTF 190
RN E H + S YC+ G + ++ S SP+ + +AT+S G K+W+ L T
Sbjct: 36 RNYE--SH-SGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTL 92
Query: 191 RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKF 250
GH + +++ + G+ LAS + D ++++W +K + L+GH + VS I F
Sbjct: 93 FGHYRGISQVKW----ATGSKY-LASASDDKTIRIWDFEKRCSVRCLKGHTNY-VSSIDF 146
Query: 251 HPSGRFLGTCCWDHS---WRLD--TPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWDHSW 304
+P G L + WD + W L T L L H EP +S + G T +D
Sbjct: 147 NPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPI-IS-VSISADGTLCATASYDGMA 204
Query: 305 RLWDLNQGQ--EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
R+WD+ GQ + L E P+ + F + + L++ R+WD R R + +
Sbjct: 205 RIWDVLSGQCLKTL-VEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDS 263
Query: 363 HLKSVFSVDF 372
H+ + +S+ +
Sbjct: 264 HVNTRYSMSW 273
Score = 200 (75.5 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 54/185 (29%), Positives = 95/185 (51%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA-NLE----GHEPFR-VSRIKFHP 290
L GHE V+ + P+ R++ T D + ++ + L LE GH +R +S++K+
Sbjct: 50 LFGHEK-SVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGH--YRGISQVKWAT 106
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
++L + D + R+WD + V +GH V + F G+++ +G D R+W+
Sbjct: 107 GSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWN 166
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
L+ G C+ L H + + SV S DG AT S D +IWD+ + LK T + P ++
Sbjct: 167 LQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLK--TLVEPINV 224
Query: 411 GVTSL 415
+++L
Sbjct: 225 PLSNL 229
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 238 (88.8 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 66/242 (27%), Positives = 109/242 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T PI+ C + ++S+ ++W + + + +GH V + L +E
Sbjct: 267 GHTAPIT-CVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLS---LSTEH 322
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ S A D K +S ++ E + S + + L WD +
Sbjct: 323 VLRSGAYDHTDFKPKSFSDERRKAKERYEAC--LKQSGERLVSASDDLQLILWDPQ-KST 379
Query: 270 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
P+ + GH+ V+ F P GR + T +D S RLWD G+ + GH VY +
Sbjct: 380 KPITKMHGHQKV-VNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCA 438
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
+ D ++ + D +VWD+R+ + L GH VF+VD+SPDG +A+G D AV+
Sbjct: 439 WSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVR 498
Query: 390 IW 391
IW
Sbjct: 499 IW 500
Score = 207 (77.9 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 69/265 (26%), Positives = 115/265 (43%)
Query: 147 SQVGD-----TRPI-SYC----SFSPDSQHVATASWS--GLCKLWTVPECELVQTFRGHD 194
S +GD T+PI + C +PDS AS S ++W V L+ T GH
Sbjct: 210 SPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHT 269
Query: 195 CNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG 254
+ + + G + S + D ++++W L L+GH RV+ +
Sbjct: 270 APITCVRW------GGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAA-RVNHLSLSTE- 321
Query: 255 RFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE 314
L + +DH+ ++ R SG L + D LWD + +
Sbjct: 322 HVLRSGAYDHTDFKPKSFSDERRKAKERYEAC-LKQSGERLVSASDDLQLILWDPQKSTK 380
Query: 315 -VLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFS 373
+ GH K V SF DG +AT D+ R+WD +TG+ + L GH+ +V+ +S
Sbjct: 381 PITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWS 440
Query: 374 PDGYHLATGSEDNAVKIWDLRKRRL 398
D L + S+D +K+WD+R +++
Sbjct: 441 TDSRLLVSSSQDTTLKVWDVRSKKM 465
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 47/136 (34%), Positives = 73/136 (53%)
Query: 273 ANLEGHEPFRVSRIKFHPS-GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ 331
A++ GH+ +S +F PS L T D + RLWD + + +GH V C+++
Sbjct: 128 ASMNGHDGTIISA-QFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWA 186
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIM-FLEGHLKSVFSV-----DFSPDG--YHLATGS 383
D S++ATG +D R WD + G I L H K + ++ +PD Y LA+GS
Sbjct: 187 PDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGS 246
Query: 384 EDNAVKIWDLRKRRLL 399
+DN V+IW+++ R LL
Sbjct: 247 KDNTVRIWNVKLRTLL 262
Score = 173 (66.0 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 52/210 (24%), Positives = 100/210 (47%)
Query: 189 TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRI 248
+ GHD + + +F P S L + + D + +LW D TP+A ++GH + VS +
Sbjct: 129 SMNGHDGTIISAQFSPSTSS----RLVTGSGDFTARLWDCDTQTPIATMKGHTNW-VSCV 183
Query: 249 KFHPSGRFLGTCCWDHS---W--RLDTPLAN-LEGH-EPFRV---SRIKFHP-SGRFL-G 296
+ P + T D++ W + +P+ + L H +P + P SG +L
Sbjct: 184 AWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLA 243
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ D++ R+W++ + GH P+ C+ + G + ++ D R+WD + G+C
Sbjct: 244 SGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSS-YDKTIRIWDAKDGKC 302
Query: 357 IMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
+ L+GH V + S + + L +G+ D+
Sbjct: 303 LHILKGHAARVNHLSLSTE-HVLRSGAYDH 331
Score = 172 (65.6 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 67/262 (25%), Positives = 120/262 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELV-QTFRGHDCNVGAIEFHPL--- 205
G T +S +++PD+ +AT S + W + + R H + A+ + PL
Sbjct: 175 GHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLA 234
Query: 206 PSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
P G LAS ++D +V++W++ T L L GH ++ +++ ++ + +D +
Sbjct: 235 PDSGPYL-LASGSKDNTVRIWNVKLRTLLFTLSGHTA-PITCVRWGGQN-WIYSSSYDKT 291
Query: 266 WRL-DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
R+ D L L+GH RV+ + L + +DH+ D + +
Sbjct: 292 IRIWDAKDGKCLHILKGHAA-RVNHLSLSTE-HVLRSGAYDHT----DFKP-KSFSDERR 344
Query: 321 HGKPVY--CMSFQGDGSVVATGGLDAFGRVWD-LRTGRCIMFLEGHLKSVFSVDFSPDGY 377
K Y C+ G+ V A+ L +WD ++ + I + GH K V FSPDG
Sbjct: 345 KAKERYEACLKQSGERLVSASDDLQLI--LWDPQKSTKPITKMHGHQKVVNHASFSPDGR 402
Query: 378 HLATGSEDNAVKIWDLRKRRLL 399
+AT S D++V++WD + + L
Sbjct: 403 CIATASFDSSVRLWDGKTGKFL 424
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 238 (88.8 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 69/265 (26%), Positives = 120/265 (45%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ D +AT S+ G ++WT + L T H + A++++ +
Sbjct: 236 VPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWN---KK 291
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 292 GNY--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQNNTTF-ASCSTDMCIHV 347
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
RL D P+ +GH V+ IK+ PSG L +C D + ++W + Q V + H K
Sbjct: 348 CRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSK 406
Query: 324 PVYCMSFQGDGS---------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374
+Y + + G ++A+ D+ R+WD+ G C+ L H + V+SV FSP
Sbjct: 407 EIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSP 466
Query: 375 DGYHLATGSEDNAVKIWDLRKRRLL 399
DG +LA+GS D V IW+ + L+
Sbjct: 467 DGKYLASGSFDKCVHIWNTQSGSLV 491
Score = 211 (79.3 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 58/198 (29%), Positives = 97/198 (48%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L D P+ +GH V+ IK+ PSG L +C D + W +
Sbjct: 335 TFASCSTDMCIHVCRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMK 393
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
DT + +L+ H + IK+ P+G L + +D + RLWD+ +G LH
Sbjct: 394 QDTCVHDLQAHSK-EIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGV-CLHT 451
Query: 319 -EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY 377
H +PVY ++F DG +A+G D +W+ ++G + G +F V ++ G
Sbjct: 452 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-TGGIFEVCWNARGD 510
Query: 378 HLATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 511 KVGASASDGSVCVLDLRK 528
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 53/259 (20%), Positives = 118/259 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE------CELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R GHD
Sbjct: 181 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 240
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ S+G + LA+ + DG ++W+ +D LA+ G + +K++ G
Sbjct: 241 DVTSLDWN---SDGTL--LATGSYDGFARIWT--EDGNLASTLGQHKGPIFALKWNKKGN 293
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
++ + D + + D + PF + + + + F +C D + L
Sbjct: 294 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGC 352
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ V +GH V + + G ++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 353 DRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIK 412
Query: 372 FSPDGYHLATGSEDNAVKI 390
+SP G AT + ++++ +
Sbjct: 413 WSPTGP--ATSNPNSSIML 429
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG------QEVL-H---QEGHGKP 324
L GHE V ++P L + D + R+W+LN+ Q VL H + GH P
Sbjct: 179 LRGHES-EVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 237
Query: 325 ----VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
V + + DG+++ATG D F R+W G L H +F++ ++ G ++
Sbjct: 238 SNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYIL 296
Query: 381 TGSEDNAVKIWD 392
+ D IWD
Sbjct: 297 SAGVDKTTIIWD 308
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 229 (85.7 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 67/219 (30%), Positives = 106/219 (48%)
Query: 200 IEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP---LANLEGHEPFRVSRIKFHPSGRF 256
+ +HP G + LA+CA D +++WS D + + +LEGHE V R+ + P GRF
Sbjct: 30 LAWHP---NGEI--LATCANDKYIQIWSKDTNGKWGLVQSLEGHEK-TVRRVAWSPCGRF 83
Query: 257 LGTCCWDHS---WR-----LD-TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 304
L +D S W L+ T +++LEGH + V + + +G L TC D S W
Sbjct: 84 LAGASFDASTSIWEKSKDELEFTHVSSLEGHT-YEVKSVAWDSTGTLLATCSRDKSIWIW 142
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG--RCIMFLEG 362
++ D N + + GHG+ + C+ + + ++A+ D + W G CI L G
Sbjct: 143 QMEDDNDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTG 202
Query: 363 HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW 401
H S++ + F+ DG L + ED V W K KW
Sbjct: 203 HESSIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENE-KW 240
Score = 180 (68.4 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 61/256 (23%), Positives = 118/256 (46%)
Query: 159 SFSPDSQHVATASWSGLCKLW---TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLA 215
++ P+ + +AT + ++W T + LVQ+ GH+ V + + P G LA
Sbjct: 31 AWHPNGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPC---GRF--LA 85
Query: 216 SCAQDGSVKLWSLDKD----TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL 268
+ D S +W KD T +++LEGH + V + + +G L TC D S W++
Sbjct: 86 GASFDASTSIWEKSKDELEFTHVSSLEGHT-YEVKSVAWDSTGTLLATCSRDKSIWIWQM 144
Query: 269 DTP-----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW-DLNQGQEVLHQ-EGH 321
+ L+ GH + + +HP+ L + +D + + W D++ E ++ GH
Sbjct: 145 EDDNDFECLSINSGHGQ-DIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGH 203
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVW--DLRTGRCI---MFLEGHLKSVFSVDFSPDG 376
++ ++F DG + + G D W D + I F + + ++S+D+S
Sbjct: 204 ESSIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSLT 263
Query: 377 YHLATGSEDNAVKIWD 392
+ TGS D+++ ++
Sbjct: 264 NTIVTGSADDSIIFYE 279
Score = 178 (67.7 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 49/172 (28%), Positives = 83/172 (48%)
Query: 236 NLEGHEPF-RVSRIKFHPSGRFLGTCCWD---HSWRLDTP-----LANLEGHEPFRVSRI 286
+++ P+ +V + +HP+G L TC D W DT + +LEGHE V R+
Sbjct: 17 SMQKEAPYDKVWNLAWHPNGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEK-TVRRV 75
Query: 287 KFHPSGRFLGTCCWDHSWRLWDLNQGQ-EVLHQ---EGHGKPVYCMSFQGDGSVVATGGL 342
+ P GRFL +D S +W+ ++ + E H EGH V +++ G+++AT
Sbjct: 76 AWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSR 135
Query: 343 DAFGRVWDLRTGR---CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
D +W + C+ GH + + V + P+ LA+ S D+ +K W
Sbjct: 136 DKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKFW 187
Score = 135 (52.6 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 40/129 (31%), Positives = 62/129 (48%)
Query: 274 NLEGHEPF-RVSRIKFHPSGRFLGTCCWDHSWRLW--DLNQGQEVLHQ--EGHGKPVYCM 328
+++ P+ +V + +HP+G L TC D ++W D N G+ L Q EGH K V +
Sbjct: 17 SMQKEAPYDKVWNLAWHPNGEILATCANDKYIQIWSKDTN-GKWGLVQSLEGHEKTVRRV 75
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRC----IMFLEGHLKSVFSVDFSPDGYHLATGSE 384
++ G +A DA +W+ + LEGH V SV + G LAT S
Sbjct: 76 AWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSR 135
Query: 385 DNAVKIWDL 393
D ++ IW +
Sbjct: 136 DKSIWIWQM 144
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 47/213 (22%), Positives = 92/213 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECEL----VQTFRGHDCNVGAIEFHPL 205
G + + ++SP + +A AS+ +W + EL V + GH V ++ +
Sbjct: 67 GHEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWD-- 124
Query: 206 PSEGAVCSLASCAQDGSVKLWSLDKDTPLANLE---GHEPFRVSRIKFHPSGRFLGTCCW 262
S G + LA+C++D S+ +W ++ D L GH + + +HP+ L + +
Sbjct: 125 -STGTL--LATCSRDKSIWIWQMEDDNDFECLSINSGHGQ-DIKCVLWHPNEELLASSSY 180
Query: 263 DHS---WR-LDTP---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE- 314
D + W+ +D + L GHE + + F+ G L +C D W ++ E
Sbjct: 181 DDTIKFWKDIDGDWECINTLTGHES-SIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENEK 239
Query: 315 ----VLHQEGHGKPVYCMSFQGDGSVVATGGLD 343
+ + +P+Y + + + + TG D
Sbjct: 240 WINIFKFKNENSRPIYSIDWSSLTNTIVTGSAD 272
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 240 (89.5 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 71/285 (24%), Positives = 129/285 (45%)
Query: 129 TARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ 188
T NQ + +H ++V + ++ ++ D +AT S+ G ++W + L
Sbjct: 389 TNSNQLVLRHCIQKG--GAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKT-DGRLAS 445
Query: 189 TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRI 248
T H + A++++ + + S D + +W H + +
Sbjct: 446 TLGQHKGPIFALKWNKCGNY-----ILSAGVDKTTIIWDASTGQCTQQFAFHSAPALD-V 499
Query: 249 KFHPSGRFLGTCCWD---HSWRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 303
+ + F +C D H RL + P+ +GH V+ IK+ P G+ L +C D +
Sbjct: 500 DWQTNQAF-ASCSTDQRIHVCRLGVNEPIKTFKGHTN-EVNAIKWCPQGQLLASCSDDMT 557
Query: 304 WRLWDLNQGQEVLHQEGHGKPVYCMSFQ--GDGS-------VVATGGLDAFGRVWDLRTG 354
++W +N+ + + H K +Y + + G G+ ++A+ D+ R+WD+ G
Sbjct: 558 LKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERG 617
Query: 355 RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
CI L H + V+SV FSPDG HLA+GS D V IW + +L+
Sbjct: 618 SCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLV 662
Score = 205 (77.2 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 64/264 (24%), Positives = 119/264 (45%)
Query: 147 SQVGDTR-PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPL 205
S +G + PI ++ ++ +A +W + Q F H + A++
Sbjct: 445 STLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFH--SAPALDVDWQ 502
Query: 206 PSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
++ + ASC+ D + + L + P+ +GH V+ IK+ P G+ L +C D +
Sbjct: 503 TNQ----AFASCSTDQRIHVCRLGVNEPIKTFKGHTN-EVNAIKWCPQGQLLASCSDDMT 557
Query: 266 ---WRL--DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQ 311
W + D +L+ H + IK+ P+G L + +D + RLWD+ +
Sbjct: 558 LKIWSMNRDRCCHDLQAHSK-EIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVER 616
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
G + H +PVY ++F DG +A+G D +W +TG+ + +G +F V
Sbjct: 617 GSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKG-TGGIFEVC 675
Query: 372 FSPDGYHLATGSEDNAVKIWDLRK 395
++ G + + D +V + DLRK
Sbjct: 676 WNSKGTKVGASASDGSVFVLDLRK 699
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 233 (87.1 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 68/255 (26%), Positives = 117/255 (45%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTV-PECELVQTFRGHDCNVGAI-EFHPLPSEGAVCSLA 215
C F P +A+A + L LW V +C+ T +GH GA+ E H ++G++ L
Sbjct: 99 CKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHS---GAVMELH-YNTDGSM--LF 152
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPL 272
S + D +V +W + + L+GH F S + + T D + W +
Sbjct: 153 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 212
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
A ++V + F+ + + + D+ ++WDL Q + GH V +S
Sbjct: 213 AVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 272
Query: 333 DGSVVATGGLDAFGRVWDLRT----GRCIMFLEGHL----KSVFSVDFSPDGYHLATGSE 384
+GS + + +D R+WD+R RC+ +G++ K++ +SPDG +A GS
Sbjct: 273 EGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSA 332
Query: 385 DNAVKIWDLRKRRLL 399
D V +WD RR+L
Sbjct: 333 DRFVYVWDTTSRRIL 347
Score = 202 (76.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 62/239 (25%), Positives = 107/239 (44%)
Query: 182 PECELVQT----FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP-LAN 236
P C +Q GH+ V +FHP + +LAS D + LW++ D A
Sbjct: 77 PRCSSLQAPIMLLSGHEGEVYCCKFHPWGN-----TLASAGFDRLILLWNVYGDCDNYAT 131
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L+GH V + ++ G L + D + W +T + L+GH F S
Sbjct: 132 LKGHSG-AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 190
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
+ + T D + +LWD+ + V + + V ++F + +GG+D +VWDL
Sbjct: 191 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDL 249
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
R + + GH SV + S +G +L + + DN V+IWD+R + C ++ ++
Sbjct: 250 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNV 308
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 57/263 (21%), Positives = 110/263 (41%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
Y + G + + ++ D + +AS +W E V+ +GH V +
Sbjct: 129 YATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC---- 184
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
P+ + + + DG+VKLW + K + + ++V + F+ + + + D+
Sbjct: 185 YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQN--TYQVLAVTFNDTSDQIISGGIDN 242
Query: 265 S---WRL-DTPLA-NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN------QGQ 313
W L L + GH V+ + G +L + D++ R+WD+ +
Sbjct: 243 DIKVWDLRQNKLTYTMRGHAD-SVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCV 301
Query: 314 EVLHQEGHG--KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
++ H K + S+ DGS +A G D F VWD + R + L GH SV +
Sbjct: 302 KIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELA 361
Query: 372 FSPDGYHLATGSEDNAVKIWDLR 394
F P+ + + S D + + +++
Sbjct: 362 FHPEEPIILSASSDKRLYMGEIQ 384
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 231 (86.4 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 65/204 (31%), Positives = 93/204 (45%)
Query: 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAV 211
T +S C + Q + T S C LW V +L+Q+F GH +V AI+ P +
Sbjct: 158 TSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTF 217
Query: 212 CSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP 271
S SC D +W + + + EGH+ V+ +KFHP G + T D S RL
Sbjct: 218 VS-GSC--DRMAFIWDMRSGHVVQSFEGHQS-DVNSVKFHPCGDAIATGSDDSSCRLYDM 273
Query: 272 LANLE----GHEP--FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
A+ E E F V+ + F SGR L D++ LWD + + V GH V
Sbjct: 274 RADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKV 333
Query: 326 YCMSFQGDGSVVATGGLDAFGRVW 349
C+ DG+ ++TG D RVW
Sbjct: 334 SCVQVSPDGTALSTGSWDYTIRVW 357
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 56/183 (30%), Positives = 82/183 (44%)
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPS--GR-FL-GTC-----CWDHSWRLDT 270
D + LW ++ L + GH V I P+ G F+ G+C WD R
Sbjct: 179 DSTCALWDVESGQLLQSFHGHSG-DVMAIDLAPNETGNTFVSGSCDRMAFIWD--MRSGH 235
Query: 271 PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV--LHQEGHGKPVYCM 328
+ + EGH+ V+ +KFHP G + T D S RL+D+ +EV +E V +
Sbjct: 236 VVQSFEGHQS-DVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSV 294
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F G ++ G D +WD + L GH V V SPDG L+TGS D +
Sbjct: 295 DFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTGSWDYTI 354
Query: 389 KIW 391
++W
Sbjct: 355 RVW 357
Score = 164 (62.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 33/99 (33%), Positives = 52/99 (52%)
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD--GSVVATGGLDAFGRVWDLRTGRCIM 358
D + LWD+ GQ + GH V + + G+ +G D +WD+R+G +
Sbjct: 179 DSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQ 238
Query: 359 FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
EGH V SV F P G +ATGS+D++ +++D+R R
Sbjct: 239 SFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADR 277
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 50/148 (33%), Positives = 67/148 (45%)
Query: 259 TCC-WD-HSWRLDTPLANLEGHEPFRVSRIKFHPS--GR-FLGTCCWDHSWRLWDLNQGQ 313
TC WD S +L L + GH V I P+ G F+ C D +WD+ G
Sbjct: 181 TCALWDVESGQL---LQSFHGHSG-DVMAIDLAPNETGNTFVSGSC-DRMAFIWDMRSGH 235
Query: 314 EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR--CIMFLEGHLKSVFSVD 371
V EGH V + F G +ATG D+ R++D+R R + E + V SVD
Sbjct: 236 VVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVD 295
Query: 372 FSPDGYHLATGSEDNAVKIWD-LRKRRL 398
FS G L G D V +WD L+ R+
Sbjct: 296 FSVSGRLLFAGYNDYTVNLWDTLKSERV 323
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 28/119 (23%), Positives = 56/119 (47%)
Query: 288 FHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE---G-HGKPVYCMSFQGDGSVVATGGLD 343
+ PSG F+ D+ ++ + +E+ ++ G H + C + + TG D
Sbjct: 120 YAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGD 179
Query: 344 AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD--GYHLATGSEDNAVKIWDLRKRRLLK 400
+ +WD+ +G+ + GH V ++D +P+ G +GS D IWD+R +++
Sbjct: 180 STCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQ 238
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 216 (81.1 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 55/176 (31%), Positives = 83/176 (47%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWD-HSWRLDTP 271
LA+ D V LWS++K + +L GH P R+ G+ W L+
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 272 --LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L L GH+ + + FHP G F+ + D + +LWD+ + V GH + V C+
Sbjct: 96 KILRTLMGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
F DG +A+ D ++WDL G+ + GH V V+F P+ Y LA+GS D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 188 (71.2 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 253 SGRFLGTC---CWDHSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
SGR L T C + W ++ P + +L GH V ++ + + S R+W
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS-PVESVRLNTPEELIVAGSQSGSIRVW 90
Query: 308 DLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSV 367
DL + + GH + + F G VA+G D ++WD+R C+ GH ++V
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV 150
Query: 368 FSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
+ FSPDG LA+ ++D+ VK+WDL +++
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182
Score = 168 (64.2 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 42/157 (26%), Positives = 76/157 (48%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T P+ + + + S SG ++W + ++++T GH N+ +++FHP
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY- 116
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
G +AS +QD ++KLW + + + GH V ++F P G++L + DH+
Sbjct: 117 --GEF--VASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDGKWLASAADDHTV 171
Query: 266 --WRLDTP--LANLEGHE-PFRVSRIKFHPSGRFLGT 297
W L ++ GH P V ++FHP+ L +
Sbjct: 172 KLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEYLLAS 206
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/184 (26%), Positives = 74/184 (40%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEEYSXXXXXXXXXXXXXHLHIPEATRTARNQELQKHL 139
++T + ++NL + +P C+ L+ PE A +Q +
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMS------LTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 140 TSLS---IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN 196
L I + +G I F P + VA+ S KLW + V +RGH
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 149
Query: 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGR 255
V + F P +G LAS A D +VKLW L ++ GH P V ++FHP+
Sbjct: 150 VRCLRFSP---DGKW--LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNV--VEFHPNEY 202
Query: 256 FLGT 259
L +
Sbjct: 203 LLAS 206
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 331 QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKI 390
+ G ++ATGG D +W + CIM L GH V SV + + GS+ ++++
Sbjct: 30 KASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRV 89
Query: 391 WDLRKRRLLK 400
WDL ++L+
Sbjct: 90 WDLEAAKILR 99
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 236 (88.1 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 68/265 (25%), Positives = 122/265 (46%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ + +AT S+ G ++WT + L T H + A++++ +
Sbjct: 222 VPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWN---KK 277
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 278 GNF--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQSNNTF-ASCSTDMCIHV 333
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
+L D P+ +GH V+ IK+ P+G L +C D + ++W + Q V + H K
Sbjct: 334 CKLGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNK 392
Query: 324 PVYCMSFQ--GDGS-------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374
+Y + + G G+ ++A+ D+ R+WD+ G CI L H + V+SV FSP
Sbjct: 393 EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP 452
Query: 375 DGYHLATGSEDNAVKIWDLRKRRLL 399
DG +LA+GS D V IW+ + L+
Sbjct: 453 DGRYLASGSFDKCVHIWNTQTGALV 477
Score = 213 (80.0 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 55/197 (27%), Positives = 97/197 (49%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L +D P+ +GH V+ IK+ P+G L +C D + W +
Sbjct: 321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKIWSMK 379
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
D + +L+ H + IK+ P+G L + +D + RLWD+++G +
Sbjct: 380 QDNCVHDLQAHNK-EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
H +PVY ++F DG +A+G D +W+ +TG + G +F V ++ G
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDK 497
Query: 379 LATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 498 VGASASDGSVCVLDLRK 514
Score = 146 (56.5 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 53/245 (21%), Positives = 111/245 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE------CELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R G D
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ SEG + LA+ + DG ++W+ KD LA+ G + +K++ G
Sbjct: 227 DVTSLDWN---SEGTL--LATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGN 279
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
F+ + D + + D + PF + + + + F +C D + L Q
Sbjct: 280 FILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQ 338
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ + +GH V + + G+++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIK 398
Query: 372 FSPDG 376
+SP G
Sbjct: 399 WSPTG 403
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 236 (88.1 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 68/265 (25%), Positives = 122/265 (46%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ + +AT S+ G ++WT + L T H + A++++ +
Sbjct: 222 VPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWN---KK 277
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 278 GNF--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQSNNTF-ASCSTDMCIHV 333
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
+L D P+ +GH V+ IK+ P+G L +C D + ++W + Q V + H K
Sbjct: 334 CKLGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNK 392
Query: 324 PVYCMSFQ--GDGS-------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374
+Y + + G G+ ++A+ D+ R+WD+ G CI L H + V+SV FSP
Sbjct: 393 EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP 452
Query: 375 DGYHLATGSEDNAVKIWDLRKRRLL 399
DG +LA+GS D V IW+ + L+
Sbjct: 453 DGRYLASGSFDKCVHIWNTQTGALV 477
Score = 213 (80.0 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 55/197 (27%), Positives = 97/197 (49%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L +D P+ +GH V+ IK+ P+G L +C D + W +
Sbjct: 321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKIWSMK 379
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
D + +L+ H + IK+ P+G L + +D + RLWD+++G +
Sbjct: 380 QDNCVHDLQAHNK-EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
H +PVY ++F DG +A+G D +W+ +TG + G +F V ++ G
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDK 497
Query: 379 LATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 498 VGASASDGSVCVLDLRK 514
Score = 146 (56.5 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 53/245 (21%), Positives = 111/245 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE------CELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R G D
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ SEG + LA+ + DG ++W+ KD LA+ G + +K++ G
Sbjct: 227 DVTSLDWN---SEGTL--LATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGN 279
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
F+ + D + + D + PF + + + + F +C D + L Q
Sbjct: 280 FILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQ 338
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ + +GH V + + G+++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIK 398
Query: 372 FSPDG 376
+SP G
Sbjct: 399 WSPTG 403
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 236 (88.1 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 68/265 (25%), Positives = 122/265 (46%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ + +AT S+ G ++WT + L T H + A++++ +
Sbjct: 222 VPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWN---KK 277
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 278 GNF--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQSNNTF-ASCSTDMCIHV 333
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
+L D P+ +GH V+ IK+ P+G L +C D + ++W + Q V + H K
Sbjct: 334 CKLGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNK 392
Query: 324 PVYCMSFQ--GDGS-------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374
+Y + + G G+ ++A+ D+ R+WD+ G CI L H + V+SV FSP
Sbjct: 393 EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP 452
Query: 375 DGYHLATGSEDNAVKIWDLRKRRLL 399
DG +LA+GS D V IW+ + L+
Sbjct: 453 DGRYLASGSFDKCVHIWNTQTGALV 477
Score = 213 (80.0 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 55/197 (27%), Positives = 97/197 (49%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L +D P+ +GH V+ IK+ P+G L +C D + W +
Sbjct: 321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKIWSMK 379
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
D + +L+ H + IK+ P+G L + +D + RLWD+++G +
Sbjct: 380 QDNCVHDLQAHNK-EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
H +PVY ++F DG +A+G D +W+ +TG + G +F V ++ G
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDK 497
Query: 379 LATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 498 VGASASDGSVCVLDLRK 514
Score = 146 (56.5 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 53/245 (21%), Positives = 111/245 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE------CELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R G D
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNK 226
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ SEG + LA+ + DG ++W+ KD LA+ G + +K++ G
Sbjct: 227 DVTSLDWN---SEGTL--LATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGN 279
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
F+ + D + + D + PF + + + + F +C D + L Q
Sbjct: 280 FILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQ 338
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ + +GH V + + G+++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIK 398
Query: 372 FSPDG 376
+SP G
Sbjct: 399 WSPTG 403
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 236 (88.1 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 68/265 (25%), Positives = 122/265 (46%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ + +AT S+ G ++WT + L T H + A++++ +
Sbjct: 222 VPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWN---KK 277
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 278 GNF--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQSNNTF-ASCSTDMCIHV 333
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
+L D P+ +GH V+ IK+ P+G L +C D + ++W + Q V + H K
Sbjct: 334 CKLGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNK 392
Query: 324 PVYCMSFQ--GDGS-------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374
+Y + + G G+ ++A+ D+ R+WD+ G CI L H + V+SV FSP
Sbjct: 393 EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP 452
Query: 375 DGYHLATGSEDNAVKIWDLRKRRLL 399
DG +LA+GS D V IW+ + L+
Sbjct: 453 DGRYLASGSFDKCVHIWNTQTGALV 477
Score = 213 (80.0 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 55/197 (27%), Positives = 97/197 (49%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L +D P+ +GH V+ IK+ P+G L +C D + W +
Sbjct: 321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKIWSMK 379
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
D + +L+ H + IK+ P+G L + +D + RLWD+++G +
Sbjct: 380 QDNCVHDLQAHNK-EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
H +PVY ++F DG +A+G D +W+ +TG + G +F V ++ G
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDK 497
Query: 379 LATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 498 VGASASDGSVCVLDLRK 514
Score = 146 (56.5 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 53/245 (21%), Positives = 111/245 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE------CELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R G D
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNK 226
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ SEG + LA+ + DG ++W+ KD LA+ G + +K++ G
Sbjct: 227 DVTSLDWN---SEGTL--LATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGN 279
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
F+ + D + + D + PF + + + + F +C D + L Q
Sbjct: 280 FILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQ 338
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ + +GH V + + G+++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIK 398
Query: 372 FSPDG 376
+SP G
Sbjct: 399 WSPTG 403
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 221 (82.9 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 62/241 (25%), Positives = 114/241 (47%)
Query: 164 SQHVATASWSGLCKLWTVPE--CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221
S+ V + S L K+W + E+ GH V +++ P G + +AS + D
Sbjct: 32 SELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSP---SGNI--MASSSLDA 86
Query: 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTPLA--NLE 276
++LW L+ + +++ P + F P + L T + + ++T +L+
Sbjct: 87 HIRLWDLESGKQIRSIDAG-PVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLD 145
Query: 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGS 335
F +S I + P G++L + D ++D+ G+ +LH EGH P+ ++F D
Sbjct: 146 TRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSTDSQ 203
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
++ T D + +++D++ L GH V +V FSPD H + S D +VK+WD+
Sbjct: 204 LLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSA 263
Query: 396 R 396
R
Sbjct: 264 R 264
Score = 177 (67.4 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 50/186 (26%), Positives = 90/186 (48%)
Query: 220 DGSVKLWSL-DKDTPLA-NLEGHEPFRVSRIKFHPSGRFLGTCCWD-HS--WRLDT--PL 272
D VK+W D+ + LEGH+ VS + PSG + + D H W L++ +
Sbjct: 41 DDLVKVWKWSDERLEMQWALEGHQLGVVS-VDVSPSGNIMASSSLDAHIRLWDLESGKQI 99
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
+++ P + F P + L T ++ + G++ + GK + +++
Sbjct: 100 RSIDAG-PVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP 158
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
DG +A+G +D ++D+ TG+ + LEGH + S+ FS D L T S+D +KI+D
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYD 218
Query: 393 LRKRRL 398
++ L
Sbjct: 219 VQHASL 224
Score = 164 (62.8 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/138 (30%), Positives = 70/138 (50%)
Query: 262 WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
W RL+ A LEGH+ VS + PSG + + D RLWDL G+++ +
Sbjct: 49 WSDE-RLEMQWA-LEGHQLGVVS-VDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAG 105
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ ++F D +ATG ++ + TG+ L+ K + S+ +SPDG +LA+
Sbjct: 106 PVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 382 GSEDNAVKIWDLRKRRLL 399
G+ D + I+D+ +LL
Sbjct: 166 GAIDGIINIFDIATGKLL 183
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 53/239 (22%), Positives = 106/239 (44%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
SP +A++S +LW + + +++ + ++ F P S+ LA+ +
Sbjct: 73 SPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSP-DSQ----HLATGSHV 127
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTP--LANL 275
G V ++ ++ +L+ F +S I + P G++L + D + + + T L L
Sbjct: 128 GKVNIFGVETGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTL 186
Query: 276 EGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
EGH P R + F + L T D +++D+ GHG V ++F D
Sbjct: 187 EGHAMPIR--SLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDD 244
Query: 335 SVVATGGLDAFGRVWDLRTGRCI-MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
+ + D +VWD+ C+ FL+ H V+ V ++ +G + + +D + ++D
Sbjct: 245 AHFVSSSSDKSVKVWDVSARTCVHTFLD-HQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 56/209 (26%), Positives = 90/209 (43%)
Query: 151 DTRPISYCS--FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
D P+ S FSPDSQH+AT S G ++ V + + + +I + P +
Sbjct: 103 DAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP---D 159
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWR 267
G LAS A DG + ++ + L LEGH P R + F + L T D +
Sbjct: 160 GKY--LASGAIDGIINIFDIATGKLLHTLEGHAMPIR--SLTFSTDSQLLVTASDDGYIK 215
Query: 268 L-DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GH 321
+ D A L GH + V + F P + D S ++WD++ + +H H
Sbjct: 216 IYDVQHASLAATLSGHGSW-VLNVAFSPDDAHFVSSSSDKSVKVWDVS-ARTCVHTFLDH 273
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
V+ + + +GS + + G D V+D
Sbjct: 274 QDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 221 (82.9 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 63/245 (25%), Positives = 114/245 (46%)
Query: 163 DSQHVATASWSGLCKLWTVPE--CELVQTFRGHDCNVGAIEF-HPLPSEGAVCSLASCAQ 219
+S+ V T S L K+W + +L + GH V +++ H LP AS +
Sbjct: 31 NSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIA------ASSSL 84
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-------PL 272
D ++LW L+ + +++ P + F P ++L T H +++
Sbjct: 85 DAHIRLWDLENGKQIKSIDAG-PVDAWTLAFSPDSQYLAT--GTHVGKVNIFGVESGKKE 141
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQ 331
+L+ F +S I + P G++L + D ++D+ G+ +LH EGH P+ ++F
Sbjct: 142 YSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFS 199
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
D ++ T D + +++D++ L GH V +V F PD H + S D +VK+W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 392 DLRKR 396
D+ R
Sbjct: 260 DVGTR 264
Score = 172 (65.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 52/214 (24%), Positives = 99/214 (46%)
Query: 191 RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL-DKDTPLA-NLEGHEPFRVSRI 248
+ HD + ++ + E + ++ + + D VK+W D+ L +LEGH+ VS
Sbjct: 13 QAHDDAIWSVAWGTNKKENSE-TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVD 71
Query: 249 KFH--PSGRFLGTCCWDHSWRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304
H P W L+ + +++ P + F P ++L T
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAG-PVDAWTLAFSPDSQYLATGTHVGKV 130
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
++ + G++ + GK + +++ DG +A+G +D ++D+ TG+ + LEGH
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ S+ FSPD L T S+D +KI+D++ L
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 51/231 (22%), Positives = 99/231 (42%)
Query: 168 ATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227
A++S +LW + + +++ + + F P S+ LA+ G V ++
Sbjct: 80 ASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP-DSQ----YLATGTHVGKVNIFG 134
Query: 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTP--LANLEGHE-PF 281
++ +L+ F +S I + P G++L + D + + + T L LEGH P
Sbjct: 135 VESGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
R + F P + L T D +++D+ GH V ++F D + +
Sbjct: 194 R--SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS 251
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
D +VWD+ T C+ H V+ V ++ +G + + +D + I+D
Sbjct: 252 SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 135 (52.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 37/133 (27%), Positives = 66/133 (49%)
Query: 267 RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVY 326
RLD + LEGH+ VS + + + D RLWDL G+++ + +
Sbjct: 53 RLDLQWS-LEGHQLGVVS-VDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW 110
Query: 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
++F D +ATG ++ + +G+ L+ K + S+ +SPDG +LA+G+ D
Sbjct: 111 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 387 AVKIWDLRKRRLL 399
+ I+D+ +LL
Sbjct: 171 IINIFDIATGKLL 183
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 53/198 (26%), Positives = 87/198 (43%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSPDSQ++AT + G ++ V + + + +I + P +G LAS A
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP---DGKY--LASGA 167
Query: 219 QDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL- 275
DG + ++ + L LEGH P R + F P + L T D ++ D ANL
Sbjct: 168 IDGIINIFDIATGKLLHTLEGHAMPIR--SLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 276 ---EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
GH + V + F P + D S ++WD+ V H V+ + + G
Sbjct: 226 GTLSGHASW-VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG 284
Query: 333 DGSVVATGGLDAFGRVWD 350
+GS + + G D ++D
Sbjct: 285 NGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 221 (82.9 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 63/245 (25%), Positives = 114/245 (46%)
Query: 163 DSQHVATASWSGLCKLWTVPE--CELVQTFRGHDCNVGAIEF-HPLPSEGAVCSLASCAQ 219
+S+ V T S L K+W + +L + GH V +++ H LP AS +
Sbjct: 31 NSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLPIA------ASSSL 84
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-------PL 272
D ++LW L+ + +++ P + F P ++L T H +++
Sbjct: 85 DAHIRLWDLENGKQIKSIDAG-PVDAWTLAFSPDSQYLAT--GTHVGKVNIFGVESGKKE 141
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQ 331
+L+ F +S I + P G++L + D ++D+ G+ +LH EGH P+ ++F
Sbjct: 142 YSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFS 199
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
D ++ T D + +++D++ L GH V +V F PD H + S D +VK+W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 392 DLRKR 396
D+ R
Sbjct: 260 DVGTR 264
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 52/214 (24%), Positives = 99/214 (46%)
Query: 191 RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL-DKDTPLA-NLEGHEPFRVSRI 248
+ HD + ++ + E + ++ + + D VK+W D+ L +LEGH+ VS
Sbjct: 13 QAHDDAIWSVAWGSNKKENSE-TVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVD 71
Query: 249 KFH--PSGRFLGTCCWDHSWRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304
H P W L+ + +++ P + F P ++L T
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAG-PVDAWTLAFSPDSQYLATGTHVGKV 130
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
++ + G++ + GK + +++ DG +A+G +D ++D+ TG+ + LEGH
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ S+ FSPD L T S+D +KI+D++ L
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 51/231 (22%), Positives = 99/231 (42%)
Query: 168 ATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227
A++S +LW + + +++ + + F P S+ LA+ G V ++
Sbjct: 80 ASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP-DSQ----YLATGTHVGKVNIFG 134
Query: 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTP--LANLEGHE-PF 281
++ +L+ F +S I + P G++L + D + + + T L LEGH P
Sbjct: 135 VESGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
R + F P + L T D +++D+ GH V ++F D + +
Sbjct: 194 R--SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS 251
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
D +VWD+ T C+ H V+ V ++ +G + + +D + I+D
Sbjct: 252 SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 133 (51.9 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 34/126 (26%), Positives = 63/126 (50%)
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
+LEGH+ VS + + + D RLWDL G+++ + + ++F D
Sbjct: 59 SLEGHQLGVVS-VDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPD 117
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+ATG ++ + +G+ L+ K + S+ +SPDG +LA+G+ D + I+D+
Sbjct: 118 SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 394 RKRRLL 399
+LL
Sbjct: 178 ATGKLL 183
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 53/198 (26%), Positives = 87/198 (43%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSPDSQ++AT + G ++ V + + + +I + P +G LAS A
Sbjct: 113 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP---DGKY--LASGA 167
Query: 219 QDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL- 275
DG + ++ + L LEGH P R + F P + L T D ++ D ANL
Sbjct: 168 IDGIINIFDIATGKLLHTLEGHAMPIR--SLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 276 ---EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
GH + V + F P + D S ++WD+ V H V+ + + G
Sbjct: 226 GTLSGHASW-VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG 284
Query: 333 DGSVVATGGLDAFGRVWD 350
+GS + + G D ++D
Sbjct: 285 NGSKIVSVGDDQEIHIYD 302
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 232 (86.7 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 79/247 (31%), Positives = 108/247 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + S +FS DS+ + T S +LW +L +TF GH G + + S+G
Sbjct: 772 GHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGH---TGTVLSVAISSDG 828
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S + + +VKLW L L F S + F P R + D W
Sbjct: 829 R--QIVSGSIE-AVKLWDAATGDLLKTLASG--FAGS-VAFSPDSRQIAAGFKDGKIFIW 882
Query: 267 -RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
T LE H P + I F P + L TC D + + WD+ G V GH K V
Sbjct: 883 DAAGTLQKTLERH-PGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGG-VQEAVGHSKHV 940
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
M DG V+A+G D ++WD TG L GHL +V V FS D + + S +
Sbjct: 941 TTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE 1000
Query: 386 NAVKIWD 392
AVKIWD
Sbjct: 1001 -AVKIWD 1006
Score = 201 (75.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 69/257 (26%), Positives = 113/257 (43%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG T + + S D + + + S + KLW +L++T G++ F P +
Sbjct: 813 VGHTGTVLSVAISSDGRQIVSGSIEAV-KLWDAATGDLLKTLASGFA--GSVAFSPDSRQ 869
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW-R 267
+A+ +DG + +W T LE H P + I F P + L TC D + R
Sbjct: 870 -----IAAGFKDGKIFIWDA-AGTLQKTLERH-PGAIMSIAFSPDVKQLVTCSTDSTIKR 922
Query: 268 LDTPLANLE---GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
D + ++ GH V+ + P G+ + + D + +LWD G GH
Sbjct: 923 WDITIGGVQEAVGHSK-HVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDT 981
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFS-VDFSPDGYHLATGS 383
V + F D + + +A ++WD TG+ E VF+ V SPDG H+A+G
Sbjct: 982 VEKVVFSLDNRQIVSCSSEAV-KIWDAATGKVQNSFESD--DVFTIVAVSPDGKHIASGH 1038
Query: 384 EDNAVKIWDLRKRRLLK 400
+ +K+WD+ LLK
Sbjct: 1039 CNGRIKLWDMATGSLLK 1055
Score = 141 (54.7 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 65/253 (25%), Positives = 98/253 (38%)
Query: 159 SFSPDSQHVATASWS--GLC-KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLA 215
+FS D + +A WS C L+ +L + +GH + F S V
Sbjct: 736 AFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSS-DSRQLVTGSV 794
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL--GTCCWDHSWRLDTP-- 271
C +V+LW+ GH +S + GR + G+ W T
Sbjct: 795 DC----TVRLWNTTTGDLEKTFVGHTGTVLS-VAISSDGRQIVSGSIEAVKLWDAATGDL 849
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDL-NQGQEVLHQEGHGKPVYCMSF 330
L L F S + F P R + D +WD Q+ L E H + ++F
Sbjct: 850 LKTLASG--FAGS-VAFSPDSRQIAAGFKDGKIFIWDAAGTLQKTL--ERHPGAIMSIAF 904
Query: 331 QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKI 390
D + T D+ + WD+ G + GH K V ++ SPDG +A+GS D +K+
Sbjct: 905 SPDVKQLVTCSTDSTIKRWDITIGG-VQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKL 963
Query: 391 WDLRKRRLLKWCT 403
WD L K T
Sbjct: 964 WDAATGDLQKTLT 976
Score = 135 (52.6 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 50/216 (23%), Positives = 94/216 (43%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSPDS+ +A G +W L +T H + +I F P V L +C+
Sbjct: 862 AFSPDSRQIAAGFKDGKIFIWDAAGT-LQKTLERHPGAIMSIAFSP-----DVKQLVTCS 915
Query: 219 QDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLANLE- 276
D ++K W + + GH V+ + P G+ + + D + +L D +L+
Sbjct: 916 TDSTIKRWDITIGG-VQEAVGHSK-HVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQK 973
Query: 277 ---GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM-SFQG 332
GH V ++ F R + +C + ++WD G+ + V+ + +
Sbjct: 974 TLTGHLD-TVEKVVFSLDNRQIVSCS-SEAVKIWDAATGK--VQNSFESDDVFTIVAVSP 1029
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVF 368
DG +A+G + ++WD+ TG + + G+ +S F
Sbjct: 1030 DGKHIASGHCNGRIKLWDMATGSLLKTMAGY-RSKF 1064
Score = 87 (35.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIG 411
G+ +FSV FS DG H+A S D +++W + K LK ++ L ++G
Sbjct: 1138 GYPNWIFSVAFSSDGQHIAAASADKTIRVWSIEKS--LK-ASKYLGRAVG 1184
Score = 58 (25.5 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 372 FSPDGYHLATGSEDNAVKIWD 392
FSPD + + S D A+K+WD
Sbjct: 1091 FSPDAKLILSTSTDRAIKLWD 1111
Score = 38 (18.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 367 VFSVDFSPDGYHLAT 381
V+ V FSP +LAT
Sbjct: 1202 VYDVIFSPGNQYLAT 1216
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 237 (88.5 bits), Expect = 7.1e-17, P = 7.1e-17
Identities = 59/169 (34%), Positives = 83/169 (49%)
Query: 231 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR-LDTPLANLE----GHEPFRVSR 285
D L N+ VS + P L +C D W+ L P N+ GH + +S
Sbjct: 341 DYKLKNIFRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDW-LSD 399
Query: 286 IKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAF 345
FHPSG L T D + +LWDL +G +L EGH + V+ ++ G+ VA+ LD
Sbjct: 400 CCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKT 459
Query: 346 GRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++WD+ + RC L GH SV S++F P L T S D + IWD R
Sbjct: 460 SKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDAR 508
Score = 209 (78.6 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 70/258 (27%), Positives = 113/258 (43%)
Query: 139 LTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVG 198
L ++ + G T +S C F P +AT+S KLW + + + + TF GH V
Sbjct: 381 LPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVW 440
Query: 199 AIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLG 258
+ +H S G +AS + D + K+W ++ + L GH V+ I+F P L
Sbjct: 441 SCTWH---SCGNF--VASSSLDKTSKIWDVNSERCRCTLYGHTD-SVNSIEFFPFSNTLL 494
Query: 259 TCCWDHS---WRLDTPLA--NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ 313
T D + W T + +L GH ++ F P G + +C +LWD +
Sbjct: 495 TSSADKTLSIWDARTGICEQSLYGHM-HSINDAIFDPRGHMIASCDACGVTKLWDFRKLL 553
Query: 314 EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFS 373
++ + P ++F G V+A + + DL++G I L GH +V FS
Sbjct: 554 PIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLLDLKSGE-IHKLMGHENEAHTVVFS 612
Query: 374 PDGYHLATGSEDNAVKIW 391
DG L +G D V+ W
Sbjct: 613 HDGEILFSGGSDGTVRTW 630
Score = 208 (78.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 63/216 (29%), Positives = 90/216 (41%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
+L FR H+ V + P L SC +D K+ L K L GH +
Sbjct: 343 KLKNIFRLHELPVSCVSMQPHKD-----ILVSCGEDRLWKVLGLPKCNVLLTGFGHTDW- 396
Query: 245 VSRIKFHPSGRFLGTCCWDHS---WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCC 299
+S FHPSG L T D + W L + EGH V +H G F+ +
Sbjct: 397 LSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSR-AVWSCTWHSCGNFVASSS 455
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + ++WD+N + GH V + F + + T D +WD RTG C
Sbjct: 456 LDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQS 515
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
L GH+ S+ F P G+ +A+ K+WD RK
Sbjct: 516 LYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRK 551
Score = 175 (66.7 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 67/256 (26%), Positives = 110/256 (42%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P+S S P + + L K+ +P+C ++ T GH + FHP +
Sbjct: 354 PVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDK----- 408
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT 270
LA+ + D +VKLW L K + EGH V +H G F+ + D + W +++
Sbjct: 409 LATSSGDTTVKLWDLCKGDCILTFEGHSR-AVWSCTWHSCGNFVASSSLDKTSKIWDVNS 467
Query: 271 PLAN--LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG--QEVLHQEGHGKPVY 326
L GH V+ I+F P L T D + +WD G ++ L+ GH +
Sbjct: 468 ERCRCTLYGHTD-SVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLY--GHMHSIN 524
Query: 327 CMSFQGDGSVVATGGLDAFG--RVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
F G ++A+ DA G ++WD R I+ ++ V+F G LA S
Sbjct: 525 DAIFDPRGHMIAS--CDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGRVLAQASG 582
Query: 385 DNAVKIWDLRKRRLLK 400
+ + + DL+ + K
Sbjct: 583 NGVIHLLDLKSGEIHK 598
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 44/149 (29%), Positives = 67/149 (44%)
Query: 267 RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVY 326
+ D L N+ VS + P L +C D W++ L + +L GH +
Sbjct: 339 KFDYKLKNIFRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLS 398
Query: 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
F G +AT D ++WDL G CI+ EGH ++V+S + G +A+ S D
Sbjct: 399 DCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDK 458
Query: 387 AVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
KIWD+ R CT L ++ V S+
Sbjct: 459 TSKIWDVNSERCR--CT-LYGHTDSVNSI 484
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 235 (87.8 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 69/265 (26%), Positives = 119/265 (44%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ D +AT S+ G ++WT L T H + A++++ +
Sbjct: 228 VPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWN---KK 283
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 284 GNY--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQNNTTF-ASCSTDMCIHV 339
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
RL D P+ +GH V+ IK+ PSG L +C D + ++W + Q V + + H K
Sbjct: 340 CRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRK 398
Query: 324 PVYCMSFQGDGS---------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374
+Y + + G ++A+ D+ R+WD+ G C L H + V+SV FSP
Sbjct: 399 EIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSP 458
Query: 375 DGYHLATGSEDNAVKIWDLRKRRLL 399
DG +LA+GS D V IW+ + L+
Sbjct: 459 DGKYLASGSFDKCVHIWNTQSGSLV 483
Score = 218 (81.8 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 57/197 (28%), Positives = 95/197 (48%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L D P+ +GH V+ IK+ PSG L +C D + W +
Sbjct: 327 TFASCSTDMCIHVCRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMK 385
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
D + NL+ H + IK+ P+G L + +D + RLWD+ QG
Sbjct: 386 QDACVHNLQAHRK-EIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTL 444
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
H +PVY ++F DG +A+G D +W+ ++G + +G +F V ++ G
Sbjct: 445 RKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQG-TGGIFEVCWNAQGDK 503
Query: 379 LATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 504 VGASASDGSVCVLDLRK 520
Score = 126 (49.4 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG------QEVL-H---QEGHGKP 324
L GHE V ++P L + D + R+W+LN+ Q VL H + GH P
Sbjct: 171 LRGHES-EVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVP 229
Query: 325 ----VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
V + + DG+++ATG D F R+W G L H +F++ ++ G ++
Sbjct: 230 SNKDVTSLDWNSDGTLLATGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYIL 288
Query: 381 TGSEDNAVKIWD 392
+ D IWD
Sbjct: 289 SAGVDKTTIIWD 300
Score = 126 (49.4 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 50/245 (20%), Positives = 110/245 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE------CELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R GHD
Sbjct: 173 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVPSNK 232
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ S+G + LA+ + DG ++W+ ++ LA+ G + +K++ G
Sbjct: 233 DVTSLDWN---SDGTL--LATGSYDGFARIWT--ENGNLASTLGQHKGPIFALKWNKKGN 285
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
++ + D + + D + PF + + + + F +C D + L
Sbjct: 286 YILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGC 344
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ V +GH V + + G ++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 345 DRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIK 404
Query: 372 FSPDG 376
+SP G
Sbjct: 405 WSPTG 409
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 234 (87.4 bits), Expect = 9.6e-17, P = 9.6e-17
Identities = 68/266 (25%), Positives = 119/266 (44%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ + +AT S+ G ++WT + L T H + A++++ +
Sbjct: 218 VPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWN---KK 273
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 274 GNF--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQSNNTF-ASCSTDMCIHV 329
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
+L + P+ +GH V+ IK+ P+G L +C D + +LW + Q V + H K
Sbjct: 330 CKLGQERPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSK 388
Query: 324 PVYCMSFQ--GDGS--------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFS 373
+Y + + G G+ + + D+ R+WD G CI L H + V+SV FS
Sbjct: 389 EIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFS 448
Query: 374 PDGYHLATGSEDNAVKIWDLRKRRLL 399
PDG HLA+GS D V IW+ + L+
Sbjct: 449 PDGRHLASGSFDKCVHIWNTQSGALV 474
Score = 200 (75.5 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 53/198 (26%), Positives = 95/198 (47%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L ++ P+ +GH V+ IK+ P+G L +C D + W +
Sbjct: 317 TFASCSTDMCIHVCKLGQERPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKLWSMK 375
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSG----------RFLGTCCWDHSWRLWDLNQGQEVLH 317
DT + +L+ H + IK+ P+G + +D + RLWD +G +
Sbjct: 376 QDTCVHDLQAHSK-EIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHT 434
Query: 318 QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY 377
H +PVY ++F DG +A+G D +W+ ++G + G +F V ++ G
Sbjct: 435 LTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSGALVNSYRG-TGGIFEVCWNSTGD 493
Query: 378 HLATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 494 KVGASASDGSVCVLDLRK 511
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 53/245 (21%), Positives = 111/245 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC------ELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R G D
Sbjct: 163 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVPSNK 222
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ SEG + LA+ + DG ++W+ KD LA+ G + +K++ G
Sbjct: 223 DVTSLDWN---SEGTL--LATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGN 275
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
F+ + D + + D + PF + + + + F +C D + L Q
Sbjct: 276 FILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQ 334
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ + +GH V + + G+++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 335 ERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIK 394
Query: 372 FSPDG 376
+SP G
Sbjct: 395 WSPTG 399
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 220 (82.5 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 63/241 (26%), Positives = 111/241 (46%)
Query: 167 VATASWSGLCKLWTVPE--CELVQTFRGHDCNVGAIEF-HPLPSEGAVCSLASCAQDGSV 223
V T S L K+W + EL + GH V +++ H LP AS + D +
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIA------ASSSLDAHI 88
Query: 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-------PLANLE 276
+LW L+ + +++ P + F P ++L T H +++ +L+
Sbjct: 89 RLWDLENGKQMKSIDAG-PVDAWTLAFSPDSQYLAT--GTHMGKVNIFGVESGKKEYSLD 145
Query: 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGS 335
F +S I + P G++L + D ++D+ G+ +LH EGH P+ ++F D
Sbjct: 146 TRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDSQ 203
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
++ T D + +++D++ L GH V +V F PD H + S D +VK+WD+
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Query: 396 R 396
R
Sbjct: 264 R 264
Score = 174 (66.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 52/214 (24%), Positives = 99/214 (46%)
Query: 191 RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL-DKDTPLA-NLEGHEPFRVSRI 248
+ HD + ++ + E + ++ + + D VK+W D+ L +LEGH+ VS
Sbjct: 13 QAHDDAIWSVAWETNKKEN-IETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVD 71
Query: 249 KFH--PSGRFLGTCCWDHSWRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304
H P W L+ + +++ P + F P ++L T
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAG-PVDAWTLAFSPDSQYLATGTHMGKV 130
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
++ + G++ + GK + +++ DG +A+G +D ++D+ TG+ + LEGH
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ S+ FSPD L T S+D +KI+D++ L
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Score = 134 (52.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 51/231 (22%), Positives = 99/231 (42%)
Query: 168 ATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227
A++S +LW + + +++ + + F P S+ LA+ G V ++
Sbjct: 80 ASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSP-DSQ----YLATGTHMGKVNIFG 134
Query: 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTP--LANLEGHE-PF 281
++ +L+ F +S I + P G++L + D + + + T L LEGH P
Sbjct: 135 VESGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
R + F P + L T D +++D+ GH V ++F D + +
Sbjct: 194 R--SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS 251
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
D +VWD+ T CI H V+ V ++ +G + + +D + ++D
Sbjct: 252 SDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 34/126 (26%), Positives = 63/126 (50%)
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
+LEGH+ VS + + + D RLWDL G+++ + + ++F D
Sbjct: 59 SLEGHQLGVVS-VDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPD 117
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+ATG ++ + +G+ L+ K + S+ +SPDG +LA+G+ D + I+D+
Sbjct: 118 SQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 394 RKRRLL 399
+LL
Sbjct: 178 ATGKLL 183
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 54/199 (27%), Positives = 89/199 (44%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSPDSQ++AT + G ++ V + + + +I + P +G LAS A
Sbjct: 113 AFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSP---DGKY--LASGA 167
Query: 219 QDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL- 275
DG + ++ + L LEGH P R + F P + L T D ++ D ANL
Sbjct: 168 IDGIINIFDIATGKLLHTLEGHAMPIR--SLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 276 ---EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GHGKPVYCMSFQ 331
GH + V + F P + D S ++WD+ + +H H V+ + +
Sbjct: 226 GTLSGHASW-VLNVAFCPDDTHFVSSSSDKSVKVWDVGT-RTCIHTFFDHQDQVWGVKYN 283
Query: 332 GDGSVVATGGLDAFGRVWD 350
G+GS + + G D V+D
Sbjct: 284 GNGSKIVSVGDDQEIHVYD 302
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 237 (88.5 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 62/218 (28%), Positives = 98/218 (44%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
+Q F H V ++ S L + +D V LW++ K + +L GH +
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSR----VLVTGGEDHKVNLWAIGKPNAILSLYGHSS-GID 63
Query: 247 RIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301
+ F S + + W L+ + L GH +S + FHP G F + D
Sbjct: 64 SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS-VDFHPFGEFFASGSLD 122
Query: 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
+ ++WD+ + + +GH + V + F DG V +GG D +VWDL G+ + +
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK 182
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
H + S+DF P + LATGS D VK WDL L+
Sbjct: 183 SHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELI 220
Score = 195 (73.7 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 68/272 (25%), Positives = 121/272 (44%)
Query: 129 TARNQELQKHLT-SLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELV 187
T R +LQ+ + S ++ C ++G S+ + T LW + + +
Sbjct: 3 TKRAYKLQEFVAHSAAVNCLKIG----------RKSSRVLVTGGEDHKVNLWAIGKPNAI 52
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+ GH + ++ F SE V A+ A G++KLW L++ + L GH +S
Sbjct: 53 LSLYGHSSGIDSVTFDA--SEVLV---AAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS- 106
Query: 248 IKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 302
+ FHP G F + D + W R + +GH V+ ++F P GR++ + D+
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR-GVNVLRFTPDGRWVVSGGEDN 165
Query: 303 SWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
++WDL G+ + + H + + F ++ATG D + WDL T I
Sbjct: 166 IVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGP 225
Query: 363 HLKSVFSVDFSPDGYHLATGSEDNAVKI--WD 392
V + F+PDG + G +++ +KI W+
Sbjct: 226 ETAGVRCLSFNPDGKTVLCGLQES-LKIFSWE 256
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 237 (88.5 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 62/218 (28%), Positives = 98/218 (44%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
+Q F H V ++ S L + +D V LW++ K + +L GH +
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSR----VLVTGGEDHKVNLWAIGKPNAILSLYGHSS-GID 63
Query: 247 RIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWD 301
+ F S + + W L+ + L GH VS + FHP G F + D
Sbjct: 64 SVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVS-VNFHPFGEFFASGSLD 122
Query: 302 HSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
+ ++WD+ + + +GH + V + F DG + +GG D +VWDL G+ + +
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFK 182
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
H + S+DF P + LATGS D VK WDL L+
Sbjct: 183 SHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELI 220
Score = 211 (79.3 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 72/273 (26%), Positives = 125/273 (45%)
Query: 129 TARNQELQKHLT-SLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELV 187
T R +LQ+ + S ++ C ++G S+ + T LW + + +
Sbjct: 3 TKRAYKLQEFVAHSAAVNCLKIG----------RKSSRVLVTGGEDHKVNLWAIGKPNAI 52
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+ GH + ++ F SEG V A+ A G++KLW L++ + L GH VS
Sbjct: 53 LSLYGHSSGIDSVTFDA--SEGLV---AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVS- 106
Query: 248 IKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 302
+ FHP G F + D + W R + +GH V+ ++F P GR++ + D+
Sbjct: 107 VNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR-GVNVLRFTPDGRWIVSGGEDN 165
Query: 303 SWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
++WDL G+ +LH+ + H + + F ++ATG D + WDL T I
Sbjct: 166 VVKVWDLTAGK-LLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGG 224
Query: 362 GHLKSVFSVDFSPDGYHLATGSEDNAVKI--WD 392
V + F+PDG + G +++ +KI W+
Sbjct: 225 TETTGVRCLTFNPDGKSVLCGLQES-LKIFSWE 256
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 233 (87.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 68/265 (25%), Positives = 122/265 (46%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ + +AT S+ G ++WT + L T H + A++++ +
Sbjct: 222 VPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWN---KK 277
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 278 GNF--ILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALD-VDWQSNNTF-ASCSTDMCIHV 333
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
+L D P+ +GH V+ IK+ P+G L +C D + ++W + Q V + H K
Sbjct: 334 CKLGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNK 392
Query: 324 PVYCMSFQ--GDGS-------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374
+Y + + G G+ ++A+ D+ R+WD+ G CI L H + V+SV FSP
Sbjct: 393 EIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP 452
Query: 375 DGYHLATGSEDNAVKIWDLRKRRLL 399
DG +LA+GS D V IW+ + L+
Sbjct: 453 DGRYLASGSFDKCVHIWNTQTGALV 477
Score = 213 (80.0 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 55/197 (27%), Positives = 97/197 (49%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L +D P+ +GH V+ IK+ P+G L +C D + W +
Sbjct: 321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKIWSMK 379
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
D + +L+ H + IK+ P+G L + +D + RLWD+++G +
Sbjct: 380 QDNCVHDLQAHNK-EIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
H +PVY ++F DG +A+G D +W+ +TG + G +F V ++ G
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDK 497
Query: 379 LATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 498 VGASASDGSVCVLDLRK 514
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 53/245 (21%), Positives = 111/245 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE------CELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R G D
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ SEG + LA+ + DG ++W+ KD LA+ G + +K++ G
Sbjct: 227 DVTSLDWN---SEGTL--LATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGN 279
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
F+ + D + + D + PF + + + + F +C D + L Q
Sbjct: 280 FILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQ 338
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ + +GH V + + G+++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIK 398
Query: 372 FSPDG 376
+SP G
Sbjct: 399 WSPTG 403
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 232 (86.7 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 69/250 (27%), Positives = 121/250 (48%)
Query: 143 SIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEF 202
SI C G T ++ + D + T S K+W + +L++ +GH + ++
Sbjct: 233 SIICLS-GHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLA- 289
Query: 203 HPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTC-C 261
L +E L + A D + + + +++ A LE + + + SG T
Sbjct: 290 --LSTEYV---LRTGAFDHTGRQYPPNEEKQKA-LERYNKTKGDSPERLVSGSDDFTMFL 343
Query: 262 WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
W+ S P L GH+ V+ + F P G+++ + +D S RLW+ GQ V GH
Sbjct: 344 WEPSVSKQ-PKKRLTGHQQL-VNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGH 401
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
PVY +S+ D ++ +G D+ ++W++RT + L GH VF+VD+SPDG + +
Sbjct: 402 VGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVS 461
Query: 382 GSEDNAVKIW 391
G +D +K+W
Sbjct: 462 GGKDRVLKLW 471
Score = 205 (77.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 65/211 (30%), Positives = 105/211 (49%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
QT GH V + F P +G LAS + D +V+LW L +TPL +GH+ + V
Sbjct: 103 QTIAGHAEAVLCVSFSP---DGK--QLASGSGDTTVRLWDLYTETPLFTCKGHKNW-VLT 156
Query: 248 IKFHPSGRFL--GT-----CCWDHSWRLDTPLANLEGHEPF--RVSRIKFH---PSGRFL 295
+ + P G+ L G+ CCW+ + + + L GH+ + +S H P RF+
Sbjct: 157 VAWSPDGKHLVSGSKSGEICCWNPK-KGELEGSPLTGHKKWITGISWEPVHLSSPCRRFV 215
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D R+WD+ + ++ GH V C+ + GDG ++ TG D ++W+ G+
Sbjct: 216 -TSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGK 273
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
I L+GH + S+ S + Y L TG+ D+
Sbjct: 274 LIRELKGHGHWINSLALSTE-YVLRTGAFDH 303
Score = 182 (69.1 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 59/240 (24%), Positives = 114/240 (47%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
SP + V T+S G ++W + + + GH V +++ +G + + +QD
Sbjct: 209 SPCRRFV-TSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWG---GDGIIYT---GSQD 261
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEP 280
++K+W + + L+GH + ++ + L T +DH+ R P N E +
Sbjct: 262 CTIKMWETTQGKLIRELKGHGHW-INSLALSTE-YVLRTGAFDHTGRQYPP--NEEKQKA 317
Query: 281 F-RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVA 338
R ++ K R + D + LW+ + ++ + GH + V + F DG +A
Sbjct: 318 LERYNKTKGDSPERLVSGSD-DFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIA 376
Query: 339 TGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ D R+W+ TG+ + GH+ V+ V +S D L +GS+D+ +KIW++R ++L
Sbjct: 377 SASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKL 436
Score = 157 (60.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 33/95 (34%), Positives = 53/95 (55%)
Query: 304 WRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH 363
+R+ +N+ + + GH + V C+SF DG +A+G D R+WDL T + +GH
Sbjct: 93 FRIRPVNRCSQTI--AGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGH 150
Query: 364 LKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
V +V +SPDG HL +GS+ + W+ +K L
Sbjct: 151 KNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGEL 185
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 60/242 (24%), Positives = 105/242 (43%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQT-FRGHDCNVGAIEFHPLPSEGAVCSLASC 217
++SPD +H+ + S SG W + EL + GH + I + P+ +
Sbjct: 158 AWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTS 217
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTC-CWDHSWRLDTP--LA 273
++DG ++W + + L GH V+ +K+ G + G+ C W +
Sbjct: 218 SKDGDARIWDITLKKSIICLSGHT-LAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIR 276
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG-QEVLHQEGHGKPVYCMSFQG 332
L+GH + ++ + L T +DH+ R + N+ Q+ L E + K +G
Sbjct: 277 ELKGHGHW-INSLALSTE-YVLRTGAFDHTGRQYPPNEEKQKAL--ERYNKT------KG 326
Query: 333 DGSVVATGGLDAFGR-VWDLRTGRCIMF-LEGHLKSVFSVDFSPDGYHLATGSEDNAVKI 390
D G D F +W+ + L GH + V V FSPDG +A+ S D +V++
Sbjct: 327 DSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRL 386
Query: 391 WD 392
W+
Sbjct: 387 WN 388
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/175 (26%), Positives = 81/175 (46%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPS 291
+ GH V + F P G+ L + D + RL +TPL +GH+ + V + + P
Sbjct: 105 IAGHAE-AVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNW-VLTVAWSPD 162
Query: 292 GRFLGTCCWDHSWRLWDLNQGQ-EVLHQEGHGKPVYCMSFQ-----GDGSVVATGGLDAF 345
G+ L + W+ +G+ E GH K + +S++ T D
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGD 222
Query: 346 GRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
R+WD+ + I+ L GH +V V + DG + TGS+D +K+W+ + +L++
Sbjct: 223 ARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIR 276
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 230 (86.0 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 71/255 (27%), Positives = 118/255 (46%)
Query: 146 CSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHD--CNVGAIE 201
C ++ G T+ ++ + D + +AS K+W + L +T +GH N A+
Sbjct: 189 CERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 247
Query: 202 FHPLPSEGAV--CSLASCAQDGSVKLWSLDKDTPLA--NL-EGHEPFRVSRIKFHPSGRF 256
GA + AQD L L KD L NL G P R+ S F
Sbjct: 248 TDYALRTGAFEPAEASINAQDLQGSLQEL-KDRALRRYNLVRGQGPERL----VSGSDDF 302
Query: 257 LGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL 316
W + PLA + GH+ ++++ F P R + + +D S +LWD G+ +
Sbjct: 303 T-LFMWSPA-EDKKPLARMTGHQAL-INQVLFSPDSRIIASASFDKSIKLWDGRTGKYLA 359
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG 376
GH VY +++ D ++ +G D+ +VWD++ + L GH V++VD+SPDG
Sbjct: 360 SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDG 419
Query: 377 YHLATGSEDNAVKIW 391
+A+G +D ++IW
Sbjct: 420 QRVASGGKDKCLRIW 434
Score = 188 (71.2 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 58/245 (23%), Positives = 113/245 (46%)
Query: 161 SPDSQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+P+ +++A++S G ++W T CE + T GH +V + + +G L S +
Sbjct: 164 NPECRYMASSSKDGSVRVWDTTAGRCERILT--GHTQSVTCLRWG---GDGL---LYSAS 215
Query: 219 QDGSVKLWSLDKDTPLANLEGH----EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN 274
QD ++K+W L+GH +S +G F ++ L L
Sbjct: 216 QDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQE 275
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL-HQEGHGKPVYCMSFQGD 333
L+ R + ++ R + D + +W + ++ L GH + + F D
Sbjct: 276 LKDRALRRYNLVRGQGPERLVSGSD-DFTLFMWSPAEDKKPLARMTGHQALINQVLFSPD 334
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
++A+ D ++WD RTG+ + L GH+ +V+ + +S D L +GS D+ +K+WD+
Sbjct: 335 SRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 394
Query: 394 RKRRL 398
+ ++L
Sbjct: 395 KAQKL 399
Score = 163 (62.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 63/218 (28%), Positives = 95/218 (43%)
Query: 181 VPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
V C + GH V ++ F P G LAS + D +V+ W L +TP +GH
Sbjct: 54 VTRC--TSSLEGHSEAVISVAFSPT---GKY--LASGSGDTTVRFWDLSTETPHFTCQGH 106
Query: 241 EPFRVSRIKFHPSGRFLGTCC-------WDHSWRLDTPLANLEGHEPF--RVSRIKFH-- 289
+ +S I + P G+ L + C WD S L GH + +S H
Sbjct: 107 RHWVLS-ISWSPDGKTLASGCKNGQILLWDPSTGKQVGRV-LAGHSKWITGLSWEPLHAN 164
Query: 290 PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
P R++ + D S R+WD G+ GH + V C+ + GDG ++ + D +VW
Sbjct: 165 PECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 223
Query: 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
G L+GH V ++ S D Y L TG+ + A
Sbjct: 224 RAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPA 260
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
++LEGH +S + F P+G++L + D + R WDL+ +GH V +S+
Sbjct: 59 SSLEGHSEAVIS-VAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSP 117
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCI-MFLEGHLKSVFSVDF-----SPDGYHLATGSEDN 386
DG +A+G + +WD TG+ + L GH K + + + +P+ ++A+ S+D
Sbjct: 118 DGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDG 177
Query: 387 AVKIWDL---RKRRLLKWCTQ 404
+V++WD R R+L TQ
Sbjct: 178 SVRVWDTTAGRCERILTGHTQ 198
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 62/250 (24%), Positives = 108/250 (43%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELV-QTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
S+SPD + +A+ +G LW + V + GH + + + PL + +AS
Sbjct: 114 SWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASS 173
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL-DTPLA 273
++DGSV++W L GH V+ +++ G L + D + WR D L
Sbjct: 174 SKDGSVRVWDTTAGRCERILTGHTQ-SVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLC 231
Query: 274 N-LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSF-Q 331
L+GH + V+ + + L T ++ + + Q L QE + + + +
Sbjct: 232 RTLQGHGHW-VNTMALS-TDYALRTGAFEPAEASINAQDLQGSL-QELKDRALRRYNLVR 288
Query: 332 GDGSVVATGGLDAFGR-VWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
G G G D F +W + + + GH + V FSPD +A+ S D ++K
Sbjct: 289 GQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIK 348
Query: 390 IWDLRKRRLL 399
+WD R + L
Sbjct: 349 LWDGRTGKYL 358
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 228 (85.3 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 69/235 (29%), Positives = 106/235 (45%)
Query: 179 WTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLE 238
W +P Q GH + + FHPL + +ASC++D ++K+W + L+
Sbjct: 92 W-IPRPPETQKLTGHRLPITRVIFHPLWT-----IMASCSEDATIKVWDYETGQLERTLK 145
Query: 239 GHEPFRVSRIKFHPSGRFLGTCC-------WDHSWRLDTPLANLEGHEPFRVSRIKFHPS 291
GH V+ I +G+ L +C WD D L +L+GHE VS + F P+
Sbjct: 146 GHTD-AVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDC-LKSLKGHE-HTVSSVTFLPT 202
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G F+ + DH+ + WD++ G V GH V + DG++ A+ LD VW
Sbjct: 203 GDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSF 262
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPD-GYHLATGS--EDNAVKIW--DLRKRRLLKW 401
T + L H +V V+++PD Y TG E N+ I R R + W
Sbjct: 263 ATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAW 317
Score = 208 (78.3 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 69/272 (25%), Positives = 115/272 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G PI+ F P +A+ S K+W +L +T +GH V I +
Sbjct: 104 GHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAI-----DA 158
Query: 210 AVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
A L SC+ D S+KLW + L +L+GHE VS + F P+G F+ + DH+
Sbjct: 159 AGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHE-HTVSSVTFLPTGDFVLSASRDHTIKQ 217
Query: 266 WRLDTPLA--NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
W + T GH + V I+ G + D + +W L H
Sbjct: 218 WDISTGYCVYTFRGHNDW-VRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEH 276
Query: 324 PVYCMSF------------QGDGS---VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVF 368
V C+ + Q +G+ ++ +G D + W++ TG + L H V
Sbjct: 277 AVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVR 336
Query: 369 SVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ F P G +L + ++D +++W+L +R +K
Sbjct: 337 GLAFHPKGKYLISVADDKTLRVWELSAQRCMK 368
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 60/223 (26%), Positives = 95/223 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G +S +F P V +AS K W + V TFRGH+ V I + ++G
Sbjct: 189 GHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIR---ISNDG 245
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHP---------------SG 254
+ AS + D +V +WS + L HE V +++ P S
Sbjct: 246 TL--FASASLDQTVTVWSFATKSAKLVLRDHE-HAVECVEWAPDTAYTNVTGQQPEGNST 302
Query: 255 RFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDL 309
L + D S W ++T L L HE + V + FHP G++L + D + R+W+L
Sbjct: 303 HILFSGSRDRSIKAWNINTGDVLFTLLAHENW-VRGLAFHPKGKYLISVADDKTLRVWEL 361
Query: 310 NQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
+ + + E H V ++F V TG +D +VW+ R
Sbjct: 362 SAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 36/129 (27%), Positives = 54/129 (41%)
Query: 266 WRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
W DT N+ G +P S R D S + W++N G + H V
Sbjct: 283 WAPDTAYTNVTGQQPEGNSTHILFSGSR-------DRSIKAWNINTGDVLFTLLAHENWV 335
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
++F G + + D RVW+L RC+ +E H V +V F + TGS D
Sbjct: 336 RGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVD 395
Query: 386 NAVKIWDLR 394
+ K+W+ R
Sbjct: 396 MSCKVWECR 404
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 235 (87.8 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 72/237 (30%), Positives = 107/237 (45%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
+Q F H NV + S L + D V LWS+ K T +L GH V
Sbjct: 8 LQEFVAHSGNVNCLSIGKKTSR----LLLTGGDDYKVNLWSIGKTTSPMSLCGHTS-PVD 62
Query: 247 RIKFHP------SGRFLGTC-CWDHSWRLDTPLAN-LEGHEPFRVSRIKFHPSGRFLGTC 298
+ F+ +G G WD ++ + GH S ++FHP G FL +
Sbjct: 63 SVAFNSEEVLVLAGASSGVIKLWDLE---ESKMVRAFTGHRS-NCSAVEFHPFGEFLASG 118
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
D + R+WD + + +GH + + + F DG V +GGLD +VWDL G+ +
Sbjct: 119 SSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLH 178
Query: 359 FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
+ H + S+DF P + LATGS D VK WDL L+ T+ P + GV ++
Sbjct: 179 EFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIG-TTR--PEATGVRAI 232
Score = 220 (82.5 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 67/222 (30%), Positives = 106/222 (47%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
LW++ + + GH V ++ F+ SE V LA A G +KLW L++ +
Sbjct: 42 LWSIGKTTSPMSLCGHTSPVDSVAFN---SE-EVLVLAG-ASSGVIKLWDLEESKMVRAF 96
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSG 292
GH S ++FHP G FL + D + R+ DT + +GH +S I+F P G
Sbjct: 97 TGHRS-NCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTR-GISTIEFSPDG 154
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
R++ + D+ ++WDL G+ +LH+ + H P+ + F ++ATG D + WDL
Sbjct: 155 RWVVSGGLDNVVKVWDLTAGK-LLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA-VKIWD 392
T I V ++ F PDG L G +D V W+
Sbjct: 214 ETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWE 255
Score = 200 (75.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 61/203 (30%), Positives = 94/203 (46%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T P+ +F+ + V + SG+ KLW + E ++V+ F GH N A+EFHP
Sbjct: 53 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF- 111
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
G LAS + D ++++W K + +GH +S I+F P GR++ + D+
Sbjct: 112 --GEF--LASGSSDTNLRVWDTRKKGCIQTYKGHTR-GISTIEFSPDGRWVVSGGLDNVV 166
Query: 266 --WRLDTP--LANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W L L + HE P R + FHP L T D + + WDL + +
Sbjct: 167 KVWDLTAGKLLHEFKCHEGPIR--SLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRP 224
Query: 321 HGKPVYCMSFQGDGSVVATGGLD 343
V ++F DG + G LD
Sbjct: 225 EATGVRAIAFHPDGQTLFCG-LD 246
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 223 (83.6 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 69/256 (26%), Positives = 114/256 (44%)
Query: 160 FSPDSQHVATASWSGLCKLWTVP-ECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
F+P +A+ S LW V +C+ +GH + ++ H S+G+ + S +
Sbjct: 61 FNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAI--LDLH-WTSDGS--QIVSAS 115
Query: 219 QDGSVKLWSLDKDTPLANLEGHEPFRVS--RIKFHP----SGRFLGTC-CWDHSWRLDTP 271
D +V+ W ++ + + H F S + P SG GT WD R
Sbjct: 116 PDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQR--GA 173
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ 331
+ + ++++ + F + + T D+ ++WDL +G+ + EGH + MS
Sbjct: 174 IQTFP--DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLS 231
Query: 332 GDGSVVATGGLDAFGRVWDLRT----GRCIMFLEGHL----KSVFSVDFSPDGYHLATGS 383
DGS + T G+D VWD+R RC+ EGH K++ +SPDG + GS
Sbjct: 232 PDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGS 291
Query: 384 EDNAVKIWDLRKRRLL 399
D V IWD RR +
Sbjct: 292 SDRMVHIWDTTSRRTI 307
Score = 179 (68.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 57/215 (26%), Positives = 96/215 (44%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRV 245
+ GH V ++F+P G + +AS + D + LW + D L+GH+ +
Sbjct: 46 IMLLSGHPSAVYTMKFNPA---GTL--IASGSHDREIFLWRVHGDCKNFMVLKGHKN-AI 99
Query: 246 SRIKFHPSGRFLGTCCWD---HSWRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCW 300
+ + G + + D +W ++T + + H F S + +
Sbjct: 100 LDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSD 159
Query: 301 DHSWRLWDLNQGQEVLHQEGHGK-PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + +LWD+ Q + Q K + +SF + TGG+D +VWDLR G M
Sbjct: 160 DGTAKLWDMRQRGAI--QTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMT 217
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
LEGH ++ + SPDG +L T DN + +WD+R
Sbjct: 218 LEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMR 252
Score = 142 (55.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 54/247 (21%), Positives = 101/247 (40%)
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ 219
++ D + +AS + W V + ++ H V + P+ + S +
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSC----CPTRRGPPLIISGSD 159
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLAN-- 274
DG+ KLW + + + + ++++ + F + + T D+ W L A
Sbjct: 160 DGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMT 217
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDL------NQGQEVL--HQEGHGKPVY 326
LEGH+ ++ + P G +L T D+ +WD+ N+ ++ HQ K +
Sbjct: 218 LEGHQD-TITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
S+ DG+ V G D +WD + R I L GH SV F P + + S D
Sbjct: 277 KCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDK 336
Query: 387 AVKIWDL 393
+ + ++
Sbjct: 337 NIYLGEI 343
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC--IMFLEGHLKSVFSVDFSPDGY 377
GH VY M F G+++A+G D +W + G C M L+GH ++ + ++ DG
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKGHKNAILDLHWTSDGS 109
Query: 378 HLATGSEDNAVKIWDLRKRRLLK 400
+ + S D V+ WD+ + +K
Sbjct: 110 QIVSASPDKTVRAWDVETGKQIK 132
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 230 (86.0 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 68/266 (25%), Positives = 121/266 (45%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ + +AT S+ G ++WT + L T H + A++++ +
Sbjct: 285 VPSNKDVTSLDWNTNGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWN---RK 340
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 341 GNY--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQNNTTF-ASCSTDMCIHV 396
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHG 322
RL D P+ +GH V+ IK+ PSG L +C D + ++W + Q + +H + H
Sbjct: 397 CRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMKQ-EVCIHDLQAHN 454
Query: 323 KPVYCMSFQGDGS---------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFS 373
K +Y + + G ++A+ D+ R+WD+ G C L H + V+SV FS
Sbjct: 455 KEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFS 514
Query: 374 PDGYHLATGSEDNAVKIWDLRKRRLL 399
PDG +LA+GS D V IW+ + L+
Sbjct: 515 PDGKYLASGSFDKCVHIWNTQSGNLV 540
Score = 202 (76.2 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 54/197 (27%), Positives = 94/197 (47%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L D P+ +GH V+ IK+ PSG L +C D + W +
Sbjct: 384 TFASCSTDMCIHVCRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMK 442
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
+ + +L+ H + IK+ P+G L + +D + RLWD+ +G
Sbjct: 443 QEVCIHDLQAHNK-EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTL 501
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
H +PVY ++F DG +A+G D +W+ ++G + G +F V ++ G
Sbjct: 502 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRG-TGGIFEVCWNARGDK 560
Query: 379 LATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 561 VGASASDGSVCVLDLRK 577
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 51/243 (20%), Positives = 101/243 (41%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE---LVQTFRGHDCNVGAIEFHPLP 206
G + C+++P S +A+ S ++W + E Q H G H +P
Sbjct: 230 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGG---HDVP 286
Query: 207 SEGAVCSL---------ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL 257
S V SL A+ + DG ++W+ +D LA+ G + +K++ G ++
Sbjct: 287 SNKDVTSLDWNTNGTLLATGSYDGFARIWT--EDGNLASTLGQHKGPIFALKWNRKGNYI 344
Query: 258 GTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQGQ 313
+ D + + D + PF + + + + F +C D + L +
Sbjct: 345 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCSTDMCIHVCRLGCDR 403
Query: 314 EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFS 373
V +GH V + + G ++A+ D ++W ++ CI L+ H K ++++ +S
Sbjct: 404 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWS 463
Query: 374 PDG 376
P G
Sbjct: 464 PTG 466
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 231 (86.4 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 62/213 (29%), Positives = 97/213 (45%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRV 245
+Q H NV ++ S G + LA+ D V +WS++K + +L GH P
Sbjct: 13 LQEIVAHSSNVSSLVLGK--STGRL--LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIES 68
Query: 246 SRIKFHPSGRFLGTCCWD-HSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 302
+I G+ W L+ L L GH+ + + FHP G F+ + D
Sbjct: 69 LQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKA-NICSLDFHPYGSFVASGSLDT 127
Query: 303 SWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
+LWD+ + + + H + V C+ F DG +A+ D ++WDL G+ + G
Sbjct: 128 DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 187
Query: 363 HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
H V V+F P Y LA+GS D ++ WDL K
Sbjct: 188 HSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEK 220
Score = 227 (85.0 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 63/216 (29%), Positives = 98/216 (45%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T PI S + + S SG ++W + ++++T GH N+ +++FHP
Sbjct: 58 SLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG 117
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
S +AS + D +KLW + + + + H V ++F P G++L + DH+
Sbjct: 118 S-----FVASGSLDTDIKLWDVRRKGCIFKYKSHTQ-AVRCLRFSPDGKWLASAADDHTV 171
Query: 266 --WRLDTPLANLE--GHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W L E GH P V ++FHPS L + D + R WDL + V E
Sbjct: 172 KLWDLTAGKVMFEFTGHSGPVNV--VEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEE 229
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
PV C+ F DG + G D+ RV+ RC
Sbjct: 230 EATPVRCILFNPDGCCLYGGFQDSL-RVYGWEPERC 264
Score = 215 (80.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 60/221 (27%), Positives = 102/221 (46%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
+W+V + V + GH + +++ E + +A +Q GS+++W L+ L L
Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISA--KEELI--VAG-SQSGSIRVWDLEAAKILRTL 101
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPSG 292
GH+ + + FHP G F+ + D W R + + H V ++F P G
Sbjct: 102 LGHKA-NICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQ-AVRCLRFSPDG 159
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
++L + DH+ +LWDL G+ + GH PV + F ++A+G D R WDL
Sbjct: 160 KWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLE 219
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA-VKIWD 392
+ +E V + F+PDG L G +D+ V W+
Sbjct: 220 KFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWE 260
Score = 183 (69.5 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 45/152 (29%), Positives = 76/152 (50%)
Query: 253 SGRFLGTC---CWDHSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
+GR L T C + W ++ P + +L GH + ++ + S R+W
Sbjct: 32 TGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTT-PIESLQISAKEELIVAGSQSGSIRVW 90
Query: 308 DLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSV 367
DL + + GH + + F GS VA+G LD ++WD+R CI + H ++V
Sbjct: 91 DLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAV 150
Query: 368 FSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
+ FSPDG LA+ ++D+ VK+WDL +++
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKVM 182
Score = 120 (47.3 bits), Expect = 0.00062, P = 0.00062
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G ++ATGG D VW + C+M L GH + S+ S + GS+ ++++WDL
Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 394 RKRRLLKWCTQLLPNSIGVTSL 415
++L+ LL + + SL
Sbjct: 93 EAAKILR---TLLGHKANICSL 111
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 217 (81.4 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 62/241 (25%), Positives = 114/241 (47%)
Query: 164 SQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221
S+ V + S L K+W + +L T GH V +++ + G++ AS + D
Sbjct: 32 SETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVD---ISHTGSIA--ASSSLDA 86
Query: 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTPLA--NLE 276
++LW L+ + +++ P + F P +FL T + + ++T +L+
Sbjct: 87 HIRLWDLETGKQIKSIDAG-PVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLD 145
Query: 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGS 335
F +S I + P G++L + D ++D+ G+ +LH EGH P+ ++F D
Sbjct: 146 TRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDSQ 203
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
++ T D + +++D++ L GH V +V F PD H + S D +VK+WD
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGT 263
Query: 396 R 396
R
Sbjct: 264 R 264
Score = 193 (73.0 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 56/215 (26%), Positives = 104/215 (48%)
Query: 191 RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL-DKDTPLA-NLEGHEPFRVSRI 248
+ HD + ++ + +G+ ++ S + D VK+W D+ L LEGH+ VS +
Sbjct: 13 QAHDDAIWSVAWGKNKKDGSE-TVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVS-V 70
Query: 249 KFHPSGRFLGTCCWD-HS--WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 303
+G + D H W L+T + +++ P + F P +FL T
Sbjct: 71 DISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAG-PVDAWSLAFSPDSQFLATGSHVGK 129
Query: 304 WRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH 363
++ + G++ + GK + +++ DG +A+G +D ++D+ TG+ + LEGH
Sbjct: 130 VNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 364 LKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ S+ FSPD L T S+D +KI+D++ L
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Score = 149 (57.5 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 39/138 (28%), Positives = 68/138 (49%)
Query: 262 WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
W+ +LD LEGH+ VS + +G + D RLWDL G+++ +
Sbjct: 49 WNDE-KLDLQWT-LEGHQLGVVS-VDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAG 105
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ ++F D +ATG ++ + TG+ L+ K + S+ +SPDG +LA+
Sbjct: 106 PVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 382 GSEDNAVKIWDLRKRRLL 399
G+ D + I+D+ +LL
Sbjct: 166 GAIDGIINIFDIATGKLL 183
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 52/231 (22%), Positives = 100/231 (43%)
Query: 168 ATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227
A++S +LW + + +++ + ++ F P S+ LA+ + G V ++
Sbjct: 80 ASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSP-DSQ----FLATGSHVGKVNIFG 134
Query: 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTP--LANLEGHE-PF 281
++ +L+ F +S I + P G++L + D + + + T L LEGH P
Sbjct: 135 VETGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
R + F P + L T D +++D+ GHG V ++F D + +
Sbjct: 194 R--SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSS 251
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
D +VWD T C+ H V+ V ++ G + + +D + I+D
Sbjct: 252 SDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 57/208 (27%), Positives = 87/208 (41%)
Query: 151 DTRPISYCS--FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
D P+ S FSPDSQ +AT S G ++ V + + + +I + P +
Sbjct: 103 DAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP---D 159
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWR 267
G LAS A DG + ++ + L LEGH P R + F P + L T D +
Sbjct: 160 GKY--LASGAIDGIINIFDIATGKLLHTLEGHAMPIR--SLTFSPDSQLLVTASDDGYIK 215
Query: 268 L-DTPLANL----EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322
+ D ANL GH + V + F P + D S ++WD V H
Sbjct: 216 IYDVQHANLAGTLSGHGSW-VLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQ 274
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWD 350
V+ + + G GS + + G D ++D
Sbjct: 275 DQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 34/105 (32%), Positives = 48/105 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G PI +FSPDSQ + TAS G K++ V L T GH V + F P +
Sbjct: 188 GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTH- 246
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG 254
S + D SVK+W T + H+ +V +K++ SG
Sbjct: 247 ----FVSSSSDKSVKVWDAGTRTCVHTFFDHQD-QVWGVKYNGSG 286
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 217 (81.4 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 62/241 (25%), Positives = 114/241 (47%)
Query: 164 SQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221
S+ V + S L K+W + +L T GH V +++ + G++ AS + D
Sbjct: 32 SETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVD---ISHTGSIA--ASSSLDA 86
Query: 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTPLA--NLE 276
++LW L+ + +++ P + F P +FL T + + ++T +L+
Sbjct: 87 HIRLWDLETGKQIKSIDAG-PVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLD 145
Query: 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGS 335
F +S I + P G++L + D ++D+ G+ +LH EGH P+ ++F D
Sbjct: 146 TRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDSQ 203
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
++ T D + +++D++ L GH V +V F PD H + S D +VK+WD
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGT 263
Query: 396 R 396
R
Sbjct: 264 R 264
Score = 191 (72.3 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 56/215 (26%), Positives = 103/215 (47%)
Query: 191 RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL-DKDTPLA-NLEGHEPFRVSRI 248
+ HD + ++ + G+ ++ S + D VK+W D+ L LEGH+ VS +
Sbjct: 13 QAHDDAIWSVAWGKNKKNGSE-TVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVS-V 70
Query: 249 KFHPSGRFLGTCCWD-HS--WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 303
+G + D H W L+T + +++ P + F P +FL T
Sbjct: 71 DISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAG-PVDAWSLAFSPDSQFLATGSHVGK 129
Query: 304 WRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH 363
++ + G++ + GK + +++ DG +A+G +D ++D+ TG+ + LEGH
Sbjct: 130 VNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 364 LKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ S+ FSPD L T S+D +KI+D++ L
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Score = 149 (57.5 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 39/138 (28%), Positives = 68/138 (49%)
Query: 262 WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
W+ +LD LEGH+ VS + +G + D RLWDL G+++ +
Sbjct: 49 WNDE-KLDLQWT-LEGHQLGVVS-VDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAG 105
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ ++F D +ATG ++ + TG+ L+ K + S+ +SPDG +LA+
Sbjct: 106 PVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLAS 165
Query: 382 GSEDNAVKIWDLRKRRLL 399
G+ D + I+D+ +LL
Sbjct: 166 GAIDGIINIFDIATGKLL 183
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 52/231 (22%), Positives = 100/231 (43%)
Query: 168 ATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227
A++S +LW + + +++ + ++ F P S+ LA+ + G V ++
Sbjct: 80 ASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSP-DSQ----FLATGSHVGKVNIFG 134
Query: 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTP--LANLEGHE-PF 281
++ +L+ F +S I + P G++L + D + + + T L LEGH P
Sbjct: 135 VETGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
R + F P + L T D +++D+ GHG V ++F D + +
Sbjct: 194 R--SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSS 251
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
D +VWD T C+ H V+ V ++ G + + +D + I+D
Sbjct: 252 SDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 57/208 (27%), Positives = 87/208 (41%)
Query: 151 DTRPISYCS--FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
D P+ S FSPDSQ +AT S G ++ V + + + +I + P +
Sbjct: 103 DAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSP---D 159
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWR 267
G LAS A DG + ++ + L LEGH P R + F P + L T D +
Sbjct: 160 GKY--LASGAIDGIINIFDIATGKLLHTLEGHAMPIR--SLTFSPDSQLLVTASDDGYIK 215
Query: 268 L-DTPLANL----EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322
+ D ANL GH + V + F P + D S ++WD V H
Sbjct: 216 IYDVQHANLAGTLSGHGSW-VLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQ 274
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWD 350
V+ + + G GS + + G D ++D
Sbjct: 275 DQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 114 (45.2 bits), Expect = 0.00084, P = 0.00084
Identities = 34/105 (32%), Positives = 48/105 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G PI +FSPDSQ + TAS G K++ V L T GH V + F P +
Sbjct: 188 GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTH- 246
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG 254
S + D SVK+W T + H+ +V +K++ SG
Sbjct: 247 ----FVSSSSDKSVKVWDAGTRTCVHTFFDHQD-QVWGVKYNGSG 286
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 230 (86.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 65/221 (29%), Positives = 109/221 (49%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WR-LD 269
L + + D ++K+W +DK + L GH V + GR++ + D + W +D
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTG-GVWTSQISQCGRYIVSGSTDRTVKVWSTVD 327
Query: 270 TPLAN-LEGHEPFRVSRIK-FHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
L + L+GH S ++ +G L T D + R+WD+ G+ + GH V C
Sbjct: 328 GSLLHTLQGH----TSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRC 383
Query: 328 MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
+ F DG+ V +GG D ++W+ TGRCI L GH V+S+ F + + +GS D +
Sbjct: 384 VQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTS 441
Query: 388 VKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLN 428
+++WD + + C LL +TS + L ++L S N
Sbjct: 442 IRVWDFTRPEGQE-CVALLQGHTSLTSGM-QLRGNILVSCN 480
Score = 215 (80.7 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 68/261 (26%), Positives = 121/261 (46%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG T + S +++ + S K+W+ + L+ T +GH V +
Sbjct: 293 VGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM-----A 347
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHP----SGRFLGTC-CWD 263
G++ L + ++D ++++W ++ LA L GH V ++F SG + T W+
Sbjct: 348 GSI--LVTGSRDTTLRVWDVESGRHLATLHGHHA-AVRCVQFDGTTVVSGGYDFTVKIWN 404
Query: 264 -HSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN--QGQE-VLHQE 319
H+ R + L GH RV + F + + D S R+WD +GQE V +
Sbjct: 405 AHTGRC---IRTLTGHNN-RVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 460
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379
GH M +G+ ++ + D+ RVWD+ G C+ L GH ++ S+ + +
Sbjct: 461 GHTSLTSGMQLRGN--ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNM-V 517
Query: 380 ATGSEDNAVKIWDLRKRRLLK 400
AT S+D VK+WD+ + L++
Sbjct: 518 ATSSDDGTVKLWDIERGALIR 538
Score = 194 (73.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 77/303 (25%), Positives = 136/303 (44%)
Query: 125 EATRTARNQELQKHLTSLSIYCSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVP 182
+ +R R +++K+ + I S V G + C D V T S K+W +
Sbjct: 226 DKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLV-TGSDDNTLKVWCID 284
Query: 183 ECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP 242
+ E++ T GH G + + G + S + D +VK+WS + L L+GH
Sbjct: 285 KGEVMYTLVGH---TGGVWTSQISQCGRY--IVSGSTDRTVKVWSTVDGSLLHTLQGH-- 337
Query: 243 FRVSRIK-FHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLG 296
S ++ +G L T D + W +++ LA L GH V ++F G +
Sbjct: 338 --TSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHA-AVRCVQF--DGTTVV 392
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT--G 354
+ +D + ++W+ + G+ + GH VY + F+ + S+V +G LD RVWD G
Sbjct: 393 SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEG 452
Query: 355 R-CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLP-NSIGV 412
+ C+ L+GH + G L + + D+ V++WD+ + C +L + +
Sbjct: 453 QECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGT----CVHMLSGHRSAI 506
Query: 413 TSL 415
TSL
Sbjct: 507 TSL 509
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 230 (86.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 65/221 (29%), Positives = 109/221 (49%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WR-LD 269
L + + D ++K+W +DK + L GH V + GR++ + D + W +D
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTG-GVWTSQISQCGRYIVSGSTDRTVKVWSTVD 327
Query: 270 TPLAN-LEGHEPFRVSRIK-FHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
L + L+GH S ++ +G L T D + R+WD+ G+ + GH V C
Sbjct: 328 GSLLHTLQGH----TSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRC 383
Query: 328 MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
+ F DG+ V +GG D ++W+ TGRCI L GH V+S+ F + + +GS D +
Sbjct: 384 VQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTS 441
Query: 388 VKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYIDVLESLN 428
+++WD + + C LL +TS + L ++L S N
Sbjct: 442 IRVWDFTRPEGQE-CVALLQGHTSLTSGM-QLRGNILVSCN 480
Score = 215 (80.7 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 68/261 (26%), Positives = 121/261 (46%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG T + S +++ + S K+W+ + L+ T +GH V +
Sbjct: 293 VGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAM-----A 347
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHP----SGRFLGTC-CWD 263
G++ L + ++D ++++W ++ LA L GH V ++F SG + T W+
Sbjct: 348 GSI--LVTGSRDTTLRVWDVESGRHLATLHGHHA-AVRCVQFDGTTVVSGGYDFTVKIWN 404
Query: 264 -HSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN--QGQE-VLHQE 319
H+ R + L GH RV + F + + D S R+WD +GQE V +
Sbjct: 405 AHTGRC---IRTLTGHNN-RVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 460
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379
GH M +G+ ++ + D+ RVWD+ G C+ L GH ++ S+ + +
Sbjct: 461 GHTSLTSGMQLRGN--ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNM-V 517
Query: 380 ATGSEDNAVKIWDLRKRRLLK 400
AT S+D VK+WD+ + L++
Sbjct: 518 ATSSDDGTVKLWDIERGALIR 538
Score = 194 (73.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 77/303 (25%), Positives = 136/303 (44%)
Query: 125 EATRTARNQELQKHLTSLSIYCSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVP 182
+ +R R +++K+ + I S V G + C D V T S K+W +
Sbjct: 226 DKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLV-TGSDDNTLKVWCID 284
Query: 183 ECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP 242
+ E++ T GH G + + G + S + D +VK+WS + L L+GH
Sbjct: 285 KGEVMYTLVGH---TGGVWTSQISQCGRY--IVSGSTDRTVKVWSTVDGSLLHTLQGH-- 337
Query: 243 FRVSRIK-FHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLG 296
S ++ +G L T D + W +++ LA L GH V ++F G +
Sbjct: 338 --TSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHA-AVRCVQF--DGTTVV 392
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT--G 354
+ +D + ++W+ + G+ + GH VY + F+ + S+V +G LD RVWD G
Sbjct: 393 SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEG 452
Query: 355 R-CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLP-NSIGV 412
+ C+ L+GH + G L + + D+ V++WD+ + C +L + +
Sbjct: 453 QECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGT----CVHMLSGHRSAI 506
Query: 413 TSL 415
TSL
Sbjct: 507 TSL 509
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 219 (82.2 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 76/271 (28%), Positives = 119/271 (43%)
Query: 134 ELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGH 193
+L +HL ++ C Q G R + F+ D ++ T KLW+V L++T+ GH
Sbjct: 12 QLPQHLWR-TVDCQQ-GAVRAVR---FNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGH 66
Query: 194 DCNVGAIEFHPLPSEGAV--CSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
V L ++G+ L SC+ D +V LW + L GH +V+ ++F+
Sbjct: 67 GYEV-------LDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAG-KVNCVQFN 118
Query: 252 P------SGRFLGTC-CWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304
SG GT CWD R P+ L+ + +S +K G+ D
Sbjct: 119 EEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQD-GISSLKVSEHELLTGSV--DGRV 175
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R +DL GQ L + G P+ C+ F DG + LD+ R+ D TG + GH+
Sbjct: 176 RRYDLRMGQ--LQVDYIGSPITCVCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHV 233
Query: 365 KSVFSVD--FSPDGYHLATGSEDNAVKIWDL 393
+ +D + H+ + SED V WDL
Sbjct: 234 NKGYKLDCCLTDKDTHVLSCSEDGHVYYWDL 264
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 42/134 (31%), Positives = 66/134 (49%)
Query: 283 VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGL 342
V ++F+ G +L TC D S +LW +++G + GHG V D S + +
Sbjct: 28 VRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDNSQLCSCSS 87
Query: 343 DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWC 402
D +WD+ +G+ L GH V V F+ + + +GS D V+ WD R RR+
Sbjct: 88 DKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEP-- 145
Query: 403 TQLLPNSI-GVTSL 415
Q+L S G++SL
Sbjct: 146 IQILDESQDGISSL 159
Score = 160 (61.4 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 49/161 (30%), Positives = 72/161 (44%)
Query: 245 VSRIKFHPSGRFLGTCCWDHS---WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCC 299
V ++F+ G +L TC D S W + T L GH + V L +C
Sbjct: 28 VRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHG-YEVLDADGSYDNSQLCSCS 86
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC--I 357
D + LWD+ GQ GH V C+ F + +V+ +G +D R WD R+ R I
Sbjct: 87 SDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPI 146
Query: 358 MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
L+ + S+ S + L TGS D V+ +DLR +L
Sbjct: 147 QILDESQDGISSLKVSE--HELLTGSVDGRVRRYDLRMGQL 185
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 229 (85.7 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 68/266 (25%), Positives = 121/266 (45%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ + +AT S+ G ++WT + L T H + A++++ +
Sbjct: 277 VPSNKDVTSLDWNTNGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWN---RK 332
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 333 GNY--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQNNMTF-ASCSTDMCIHV 388
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHG 322
RL D P+ +GH V+ IK+ PSG L +C D + ++W + Q + +H + H
Sbjct: 389 CRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMKQ-EVCIHDLQAHN 446
Query: 323 KPVYCMSFQGDGS---------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFS 373
K +Y + + G ++A+ D+ R+WD+ G C L H + V+SV FS
Sbjct: 447 KEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFS 506
Query: 374 PDGYHLATGSEDNAVKIWDLRKRRLL 399
PDG +LA+GS D V IW+ + L+
Sbjct: 507 PDGRYLASGSFDKCVHIWNTQSGNLV 532
Score = 201 (75.8 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 54/197 (27%), Positives = 94/197 (47%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L D P+ +GH V+ IK+ PSG L +C D + W +
Sbjct: 376 TFASCSTDMCIHVCRLGCDRPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMK 434
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
+ + +L+ H + IK+ P+G L + +D + RLWD+ +G
Sbjct: 435 QEVCIHDLQAHNK-EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTL 493
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
H +PVY ++F DG +A+G D +W+ ++G + G +F V ++ G
Sbjct: 494 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQSGNLVHSYRG-TGGIFEVCWNARGDK 552
Query: 379 LATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 553 VGASASDGSVCVLDLRK 569
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 51/243 (20%), Positives = 101/243 (41%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE---LVQTFRGHDCNVGAIEFHPLP 206
G + C+++P S +A+ S ++W + E Q H G H +P
Sbjct: 222 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGG---HDVP 278
Query: 207 SEGAVCSL---------ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL 257
S V SL A+ + DG ++W+ +D LA+ G + +K++ G ++
Sbjct: 279 SNKDVTSLDWNTNGTLLATGSYDGFARIWT--EDGNLASTLGQHKGPIFALKWNRKGNYI 336
Query: 258 GTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQGQ 313
+ D + + D + PF + + + + F +C D + L +
Sbjct: 337 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF-ASCSTDMCIHVCRLGCDR 395
Query: 314 EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFS 373
V +GH V + + G ++A+ D ++W ++ CI L+ H K ++++ +S
Sbjct: 396 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWS 455
Query: 374 PDG 376
P G
Sbjct: 456 PTG 458
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 227 (85.0 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 57/189 (30%), Positives = 93/189 (49%)
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG-RFLGTCCWDHS--WRL--DTPLAN 274
D +V L+ +K+ + +GH +++ + HP + H W + A
Sbjct: 230 DKTVVLYDYEKEQVMQTFKGHNK-KINAVVLHPDNITAISASADSHIRVWSATDSSSKAI 288
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ---EVLHQEGHGKPVYCMSFQ 331
++ H+ V+ I + SG ++ + D W D+ G+ +V + G V+ + F
Sbjct: 289 IDVHQA-PVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFH 347
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
DG + TG DA ++WDL+ GH +V S+ FS +GY+LATGSED VK+W
Sbjct: 348 PDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLW 407
Query: 392 DLRKRRLLK 400
DLRK + LK
Sbjct: 408 DLRKLKNLK 416
Score = 185 (70.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 54/208 (25%), Positives = 95/208 (45%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
+++QTF+GH+ + A+ HP + ++++ A D +++WS + A ++ H+
Sbjct: 242 QVMQTFKGHNKKINAVVLHP----DNITAISASA-DSHIRVWSATDSSSKAIIDVHQA-P 295
Query: 245 VSRIKFHPSGRFLGTCCWDHSW-----RLDTPLA--NLEGHEPFRVSRIKFHPSGRFLGT 297
V+ I + SG ++ + D W R L ++E V I+FHP G GT
Sbjct: 296 VTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGT 355
Query: 298 CCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI 357
D ++WDL GH V ++F +G +ATG D ++WDLR + +
Sbjct: 356 GAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNL 415
Query: 358 M-FLEGHLKSVFSVDFSPDGYHLATGSE 384
F + + S+ F G L G +
Sbjct: 416 KTFANEEKQPINSLSFDMTGTFLGIGGQ 443
Score = 130 (50.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 49/177 (27%), Positives = 75/177 (42%)
Query: 137 KHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN 196
K L +S+ + G + F PD T + + K+W + + F GH
Sbjct: 326 KSLCKVSV---EPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAA 382
Query: 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF 256
V +I F SE LA+ ++DG VKLW L K L E ++ + F +G F
Sbjct: 383 VRSIAF----SENGYY-LATGSEDGEVKLWDLRKLKNLKTFANEEKQPINSLSFDMTGTF 437
Query: 257 LGTCCWD----H--SWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
LG H SW + + +L H V+ ++F + R L TC D S R++
Sbjct: 438 LGIGGQKVQVLHVKSW---SEVVSLSDHSG-PVTGVRFGENARSLVTCSLDKSLRVF 490
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 216 (81.1 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 63/241 (26%), Positives = 110/241 (45%)
Query: 167 VATASWSGLCKLWTVPE--CELVQTFRGHDCNVGAIEF-HPLPSEGAVCSLASCAQDGSV 223
V T S L K+W + EL + GH V +++ H LP AS + D +
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIA------ASSSLDAHI 88
Query: 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT-------PLANLE 276
+LW L+ + +++ P + F P + L T H +++ +L+
Sbjct: 89 RLWDLENGKQMKSIDAG-PVDAWTLAFSPDSQHLAT--GTHMGKVNIFGVESGKKEYSLD 145
Query: 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGS 335
F +S I + P G++L + D ++D+ G+ +LH EGH P+ ++F D
Sbjct: 146 TRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDSQ 203
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
++ T D + +++D++ L GH V +V F PD H + S D +VK+WD+
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Query: 396 R 396
R
Sbjct: 264 R 264
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 52/214 (24%), Positives = 98/214 (45%)
Query: 191 RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL-DKDTPLA-NLEGHEPFRVSRI 248
+ HD + ++ + E + ++ + + D VK+W D+ L +LEGH+ VS
Sbjct: 13 QAHDDAIWSVAWETNKKEN-IETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVD 71
Query: 249 KFH--PSGRFLGTCCWDHSWRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304
H P W L+ + +++ P + F P + L T
Sbjct: 72 ISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAG-PVDAWTLAFSPDSQHLATGTHMGKV 130
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
++ + G++ + GK + +++ DG +A+G +D ++D+ TG+ + LEGH
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ S+ FSPD L T S+D +KI+D++ L
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 55/199 (27%), Positives = 89/199 (44%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSPDSQH+AT + G ++ V + + + +I + P +G LAS A
Sbjct: 113 AFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSP---DGKY--LASGA 167
Query: 219 QDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL- 275
DG + ++ + L LEGH P R + F P + L T D ++ D ANL
Sbjct: 168 IDGIINIFDIATGKLLHTLEGHAMPIR--SLTFSPDSQLLVTASDDGYIKIYDVQHANLA 225
Query: 276 ---EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE-GHGKPVYCMSFQ 331
GH + V + F P + D S ++WD+ + +H H V+ + +
Sbjct: 226 GTLSGHASW-VLNVAFCPDDTHFVSSSSDKSVKVWDVGT-RTCIHTFFDHQDQVWGVKYN 283
Query: 332 GDGSVVATGGLDAFGRVWD 350
G+GS + + G D V+D
Sbjct: 284 GNGSKIVSVGDDQEIHVYD 302
Score = 135 (52.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 51/231 (22%), Positives = 99/231 (42%)
Query: 168 ATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS 227
A++S +LW + + +++ + + F P S+ LA+ G V ++
Sbjct: 80 ASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSP-DSQ----HLATGTHMGKVNIFG 134
Query: 228 LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLDTP--LANLEGHE-PF 281
++ +L+ F +S I + P G++L + D + + + T L LEGH P
Sbjct: 135 VESGKKEYSLDTRGKFILS-IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
R + F P + L T D +++D+ GH V ++F D + +
Sbjct: 194 R--SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS 251
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
D +VWD+ T CI H V+ V ++ +G + + +D + ++D
Sbjct: 252 SDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/126 (26%), Positives = 63/126 (50%)
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
+LEGH+ VS + + + D RLWDL G+++ + + ++F D
Sbjct: 59 SLEGHQLGVVS-VDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPD 117
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+ATG ++ + +G+ L+ K + S+ +SPDG +LA+G+ D + I+D+
Sbjct: 118 SQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 394 RKRRLL 399
+LL
Sbjct: 178 ATGKLL 183
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 226 (84.6 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 69/255 (27%), Positives = 119/255 (46%)
Query: 146 CSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHD--CNVGAIE 201
C ++ G T+ ++ + D + +AS K+W + L +T +GH N A+
Sbjct: 238 CERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 296
Query: 202 FHPLPSEGAV--CSLASCAQD--GSVKLWSLDKDTPLANL-EGHEPFRVSRIKFHPSGRF 256
GA AQD GS+K ++ + NL G P R+ S F
Sbjct: 297 TDYALRTGAFEPAEATVNAQDLQGSLKELK-ERASSRYNLVRGQGPERL----VSGSDDF 351
Query: 257 LGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL 316
W + PLA + GH+ ++++ F P R + + +D S +LWD G+ +
Sbjct: 352 T-LFLWSPA-EDKKPLARMTGHQAL-INQVLFSPDSRIVASASFDKSIKLWDGRTGKYLA 408
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG 376
GH VY +++ D ++ +G D+ +VWD++ + L GH V++VD+SPDG
Sbjct: 409 SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDG 468
Query: 377 YHLATGSEDNAVKIW 391
+A+G +D ++IW
Sbjct: 469 QRVASGGKDKCLRIW 483
Score = 197 (74.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 61/245 (24%), Positives = 113/245 (46%)
Query: 161 SPDSQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+P+ ++VA++S G ++W T CE + T GH +V + + +G L S +
Sbjct: 213 NPECRYVASSSKDGSVRVWDTTAGRCERILT--GHTQSVTCLRWG---GDGL---LYSAS 264
Query: 219 QDGSVKLWSLDKDTPLANLEGH----EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN 274
QD ++K+W L+GH +S +G F ++ L L
Sbjct: 265 QDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKE 324
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL-HQEGHGKPVYCMSFQGD 333
L+ R + ++ R + D + LW + ++ L GH + + F D
Sbjct: 325 LKERASSRYNLVRGQGPERLVSGSD-DFTLFLWSPAEDKKPLARMTGHQALINQVLFSPD 383
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+VA+ D ++WD RTG+ + L GH+ +V+ + +S D L +GS D+ +K+WD+
Sbjct: 384 SRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
Query: 394 RKRRL 398
+ ++L
Sbjct: 444 KAQKL 448
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 62/218 (28%), Positives = 95/218 (43%)
Query: 181 VPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
V C + GH V ++ F P G LAS + D +V+ W L +TP +GH
Sbjct: 103 VTRC--TSSLEGHSEAVISVAFSPT---GKY--LASGSGDTTVRFWDLSTETPHFTCKGH 155
Query: 241 EPFRVSRIKFHPSGRFLGTCC-------WDHSWRLDTPLANLEGHEPFRVSR----IKFH 289
+ +S I + P G+ L + C WD S L L GH + + +
Sbjct: 156 RHWVLS-ISWSPDGKKLASGCKNGQVLLWDPSTGLQVG-RTLTGHSKWITGLSWEPLHMN 213
Query: 290 PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
P R++ + D S R+WD G+ GH + V C+ + GDG ++ + D +VW
Sbjct: 214 PECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 272
Query: 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
G L+GH V ++ S D Y L TG+ + A
Sbjct: 273 RAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPA 309
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 42/141 (29%), Positives = 73/141 (51%)
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
++LEGH +S + F P+G++L + D + R WDL+ +GH V +S+
Sbjct: 108 SSLEGHSEAVIS-VAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSP 166
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCI-MFLEGHLKSVFSVDF-----SPDGYHLATGSEDN 386
DG +A+G + +WD TG + L GH K + + + +P+ ++A+ S+D
Sbjct: 167 DGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDG 226
Query: 387 AVKIWDL---RKRRLLKWCTQ 404
+V++WD R R+L TQ
Sbjct: 227 SVRVWDTTAGRCERILTGHTQ 247
Score = 135 (52.6 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 35/95 (36%), Positives = 48/95 (50%)
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
EGH + V ++F G +A+G D R WDL T +GH V S+ +SPDG
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKK 170
Query: 379 LATGSEDNAVKIWD----LRKRRLL----KWCTQL 405
LA+G ++ V +WD L+ R L KW T L
Sbjct: 171 LASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGL 205
Score = 127 (49.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 62/252 (24%), Positives = 108/252 (42%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPE-CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
S+SPD + +A+ +G LW ++ +T GH + + + PL +AS
Sbjct: 163 SWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASS 222
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL-DTPLA 273
++DGSV++W L GH V+ +++ G L + D + WR D L
Sbjct: 223 SKDGSVRVWDTTAGRCERILTGHTQ-SVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLC 280
Query: 274 N-LEGHEPFRVSRIKFHPSGRFLGTCCWDHSW---RLWDLNQGQEVLHQEGHGKPVYCMS 329
L+GH + V+ + + L T ++ + DL + L + + Y +
Sbjct: 281 RTLQGHGHW-VNTMALS-TDYALRTGAFEPAEATVNAQDLQGSLKELKERASSR--YNL- 335
Query: 330 FQGDGSVVATGGLDAFGR-VWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
+G G G D F +W + + + GH + V FSPD +A+ S D +
Sbjct: 336 VRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKS 395
Query: 388 VKIWDLRKRRLL 399
+K+WD R + L
Sbjct: 396 IKLWDGRTGKYL 407
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 226 (84.6 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 69/255 (27%), Positives = 119/255 (46%)
Query: 146 CSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHD--CNVGAIE 201
C ++ G T+ ++ + D + +AS K+W + L +T +GH N A+
Sbjct: 240 CERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 298
Query: 202 FHPLPSEGAV--CSLASCAQD--GSVKLWSLDKDTPLANL-EGHEPFRVSRIKFHPSGRF 256
GA AQD GS+K ++ + NL G P R+ S F
Sbjct: 299 TDYALRTGAFEPAEATVNAQDLQGSLKELK-ERASSRYNLVRGQGPERL----VSGSDDF 353
Query: 257 LGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL 316
W + PLA + GH+ ++++ F P R + + +D S +LWD G+ +
Sbjct: 354 T-LFLWSPA-EDKKPLARMTGHQAL-INQVLFSPDSRIVASASFDKSIKLWDGRTGKYLA 410
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG 376
GH VY +++ D ++ +G D+ +VWD++ + L GH V++VD+SPDG
Sbjct: 411 SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDG 470
Query: 377 YHLATGSEDNAVKIW 391
+A+G +D ++IW
Sbjct: 471 QRVASGGKDKCLRIW 485
Score = 197 (74.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 61/245 (24%), Positives = 113/245 (46%)
Query: 161 SPDSQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+P+ ++VA++S G ++W T CE + T GH +V + + +G L S +
Sbjct: 215 NPECRYVASSSKDGSVRVWDTTAGRCERILT--GHTQSVTCLRWG---GDGL---LYSAS 266
Query: 219 QDGSVKLWSLDKDTPLANLEGH----EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN 274
QD ++K+W L+GH +S +G F ++ L L
Sbjct: 267 QDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKE 326
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL-HQEGHGKPVYCMSFQGD 333
L+ R + ++ R + D + LW + ++ L GH + + F D
Sbjct: 327 LKERASSRYNLVRGQGPERLVSGSD-DFTLFLWSPAEDKKPLARMTGHQALINQVLFSPD 385
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+VA+ D ++WD RTG+ + L GH+ +V+ + +S D L +GS D+ +K+WD+
Sbjct: 386 SRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 445
Query: 394 RKRRL 398
+ ++L
Sbjct: 446 KAQKL 450
Score = 162 (62.1 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 61/218 (27%), Positives = 94/218 (43%)
Query: 181 VPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
V C + GH V ++ F P G LAS + D +V+ W L +TP +GH
Sbjct: 105 VTRC--TSSLEGHSEAVISVAFSPT---GKY--LASGSGDTTVRFWDLSTETPHFTCKGH 157
Query: 241 EPFRVSRIKFHPSGRFLGTCC-------WDHSWRLDTPLANLEGHEPFRVSR----IKFH 289
+ +S I + P G+ L + C WD S L GH + + +
Sbjct: 158 RHWVLS-ISWSPDGKKLASGCKNGQILLWDPSTGTQVG-RTLTGHSKWITGLSWEPLHMN 215
Query: 290 PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
P R++ + D S R+WD G+ GH + V C+ + GDG ++ + D +VW
Sbjct: 216 PECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 274
Query: 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
G L+GH V ++ S D Y L TG+ + A
Sbjct: 275 RAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPA 311
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 42/141 (29%), Positives = 73/141 (51%)
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
++LEGH +S + F P+G++L + D + R WDL+ +GH V +S+
Sbjct: 110 SSLEGHSEAVIS-VAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSP 168
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCI-MFLEGHLKSVFSVDF-----SPDGYHLATGSEDN 386
DG +A+G + +WD TG + L GH K + + + +P+ ++A+ S+D
Sbjct: 169 DGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDG 228
Query: 387 AVKIWDL---RKRRLLKWCTQ 404
+V++WD R R+L TQ
Sbjct: 229 SVRVWDTTAGRCERILTGHTQ 249
Score = 127 (49.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 62/252 (24%), Positives = 108/252 (42%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPE-CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
S+SPD + +A+ +G LW ++ +T GH + + + PL +AS
Sbjct: 165 SWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASS 224
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL-DTPLA 273
++DGSV++W L GH V+ +++ G L + D + WR D L
Sbjct: 225 SKDGSVRVWDTTAGRCERILTGHTQ-SVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLC 282
Query: 274 N-LEGHEPFRVSRIKFHPSGRFLGTCCWDHSW---RLWDLNQGQEVLHQEGHGKPVYCMS 329
L+GH + V+ + + L T ++ + DL + L + + Y +
Sbjct: 283 RTLQGHGHW-VNTMALS-TDYALRTGAFEPAEATVNAQDLQGSLKELKERASSR--YNL- 337
Query: 330 FQGDGSVVATGGLDAFGR-VWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
+G G G D F +W + + + GH + V FSPD +A+ S D +
Sbjct: 338 VRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKS 397
Query: 388 VKIWDLRKRRLL 399
+K+WD R + L
Sbjct: 398 IKLWDGRTGKYL 409
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 226 (84.6 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 60/206 (29%), Positives = 106/206 (51%)
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN----- 274
D +V ++ ++ +A L+GH +VS + +HP+ + + D + R+ +
Sbjct: 244 DKNVVVFDRREEQIVATLKGHTK-KVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQV 302
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV--LHQEGHGKPVYCMSFQG 332
+ HE V+ + H +G +L + D W D+ G+ + + E G + C F
Sbjct: 303 VRAHES-AVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHP 361
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
DG + TG D+ ++WDL+ + GH V ++ FS +GY+LATG++D+++K+WD
Sbjct: 362 DGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWD 421
Query: 393 LRKRRLLKWCTQLLPNSIGVTSLLTD 418
LRK + K T L N+ V SL+ D
Sbjct: 422 LRKLKNFKTIT--LDNNYEVKSLVFD 445
Score = 207 (77.9 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 69/279 (24%), Positives = 125/279 (44%)
Query: 123 IPEATRTARNQELQKHL---TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLW 179
+PE R ++L K+ + ++ + V + C D+ V T ++
Sbjct: 195 VPE--ELVRAEDLSKYRQVGSHAGLHSASVPGILSLDLCP--TDTNKVLTGGADKNVVVF 250
Query: 180 TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEG 239
E ++V T +GH V ++ +HP ++ V S +S D ++++WS+ + +
Sbjct: 251 DRREEQIVATLKGHTKKVSSVIYHP--AQAVVFSASS---DSTIRVWSVTGGNCVQVVRA 305
Query: 240 HEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLANL-----EGHEPFRVSRIKFHPSGR 293
HE V+ + H +G +L + D W D + + ++ +FHP G
Sbjct: 306 HES-AVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGL 364
Query: 294 FLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT 353
GT D ++WDL + V + GH PV ++F +G +ATG D+ ++WDLR
Sbjct: 365 IFGTGTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWDLRK 424
Query: 354 GRCI--MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKI 390
+ + L+ + + V S+ F G +LA G D V I
Sbjct: 425 LKNFKTITLDNNYE-VKSLVFDQSGTYLAVGGSDIRVYI 462
Score = 160 (61.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 64/252 (25%), Positives = 104/252 (41%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ +S + P V +AS ++W+V VQ R H+ V + H + G
Sbjct: 263 GHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLH---ATG 319
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP-FRVSRIKFHPSGRFLGTCCWDHS--- 265
L S ++D + L + ++ +FHP G GT D
Sbjct: 320 DY--LLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIKI 377
Query: 266 WRLD--TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ--EVLHQEGH 321
W L T +AN GH V+ I F +G +L T D S +LWDL + + + + + +
Sbjct: 378 WDLKERTNVANFPGHSG-PVTAIAFSENGYYLATGAQDSSLKLWDLRKLKNFKTITLDNN 436
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ V + F G+ +A GG D RV+ + ++ H V V F LA+
Sbjct: 437 YE-VKSLVFDQSGTYLAVGGSDI--RVYICKQWSEVLNFSDHSGLVTGVAFGEHAQFLAS 493
Query: 382 GSEDNAVKIWDL 393
D ++K + L
Sbjct: 494 TGMDRSLKFYSL 505
>CGD|CAL0002120 [details] [associations]
symbol:orf19.3862 species:5476 "Candida albicans" [GO:0010008
"endosome membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA] [GO:0031932
"TORC2 complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031234 "extrinsic to internal side of plasma membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0001558 "regulation
of cell growth" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0031929 "TOR signaling cascade" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IEA] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IEA] [GO:0030950
"establishment or maintenance of actin cytoskeleton polarity"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0030295 "protein kinase activator activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0002120 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000125
EMBL:AACQ01000124 KO:K08266 HOGENOM:HOG000208395 RefSeq:XP_441049.1
RefSeq:XP_713529.1 ProteinModelPortal:Q59V90 STRING:Q59V90
GeneID:3644824 GeneID:6335359 KEGG:cal:CaO19.11343
KEGG:cal:CaO19.3862 Uniprot:Q59V90
Length = 328
Score = 218 (81.8 bits), Expect = 9.1e-16, P = 9.1e-16
Identities = 57/233 (24%), Positives = 102/233 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G ++ F D++ + T+S G K+W V + + ++ H C V + HP ++G
Sbjct: 98 GHKNNVTSLQFQADNKWMVTSSEDGTVKVWDVRSPSVQRNYK-HQCPVNEVVIHP--NQG 154
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL------GTC-CW 262
L SC QDG++++W L +++ +L + ++ + G L G C W
Sbjct: 155 ---ELISCDQDGNIRVWDLGENSCTHHLIPEDDVPINSLSVASDGSMLVAGNNKGNCYVW 211
Query: 263 DHSWRLD----TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV-LH 317
+ D TP+ H + ++R+ + L TC DH+ R+W Q +
Sbjct: 212 KMQNQRDATVLTPVTKFRSHSKY-ITRVLLSTDMKHLATCSADHTARIWSTEQNFNLETT 270
Query: 318 QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV 370
+GH + V+ +F D + + T D + R+WDL + GH K V
Sbjct: 271 LQGHQRWVWDCAFSADSAYLVTACSDHYVRLWDLSNSETVRQYNGHHKGAVCV 323
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 54/222 (24%), Positives = 94/222 (42%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
V TF GH NV +++F ++ V S ++DG+VK+W + + N + P V+
Sbjct: 93 VMTFEGHKNNVTSLQFQA-DNKWMVTS----SEDGTVKVWDVRSPSVQRNYKHQCP--VN 145
Query: 247 RIKFHPSGRFLGTCCWDHS---WRL--DTPLANLEGHEPFRVSRIKFHPSGRFL------ 295
+ HP+ L +C D + W L ++ +L + ++ + G L
Sbjct: 146 EVVIHPNQGELISCDQDGNIRVWDLGENSCTHHLIPEDDVPINSLSVASDGSMLVAGNNK 205
Query: 296 GTCCWDHSWRLWDLNQGQ---EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
G C + W++ + V H K + + D +AT D R+W
Sbjct: 206 GNC---YVWKMQNQRDATVLTPVTKFRSHSKYITRVLLSTDMKHLATCSADHTARIWSTE 262
Query: 353 TGRCI-MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+ L+GH + V+ FS D +L T D+ V++WDL
Sbjct: 263 QNFNLETTLQGHQRWVWDCAFSADSAYLVTACSDHYVRLWDL 304
Score = 136 (52.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 45/188 (23%), Positives = 80/188 (42%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P++ P+ + + G ++W + E D +V I + S+G++
Sbjct: 143 PVNEVVIHPNQGELISCDQDGNIRVWDLGENSCTHHLIPED-DV-PINSLSVASDGSM-- 198
Query: 214 LASCAQDGSVKLWSLD--KD----TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR 267
L + G+ +W + +D TP+ H + ++R+ + L TC DH+ R
Sbjct: 199 LVAGNNKGNCYVWKMQNQRDATVLTPVTKFRSHSKY-ITRVLLSTDMKHLATCSADHTAR 257
Query: 268 LDTPLAN------LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
+ + N L+GH+ + V F +L T C DH RLWDL+ + V GH
Sbjct: 258 IWSTEQNFNLETTLQGHQRW-VWDCAFSADSAYLVTACSDHYVRLWDLSNSETVRQYNGH 316
Query: 322 GKPVYCMS 329
K C++
Sbjct: 317 HKGAVCVA 324
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 225 (84.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 67/264 (25%), Positives = 116/264 (43%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ D +A S+ G ++WT L T H + A++++ +
Sbjct: 232 VPSNKDVTSLDWNSDGTLLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWN---KK 287
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL--GTCCWDHSW 266
G + S D + +W H + + + + F GT H
Sbjct: 288 GNY--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQNNTTFASCGTDMCIHVC 344
Query: 267 RL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
RL D P+ +GH V+ IK+ PSG L +C D + ++W + Q V + H K
Sbjct: 345 RLGCDLPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKE 403
Query: 325 VYCMSFQGDGS---------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD 375
+Y + + G ++A+ D+ R+WD+ G C L H + V+S+ FSPD
Sbjct: 404 IYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPD 463
Query: 376 GYHLATGSEDNAVKIWDLRKRRLL 399
G +LA+GS D V IW+ + L+
Sbjct: 464 GKYLASGSFDKCVHIWNTQSGSLV 487
Score = 208 (78.3 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 56/197 (28%), Positives = 94/197 (47%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC D + + L D P+ +GH V+ IK+ PSG L +C D + W +
Sbjct: 331 TFASCGTDMCIHVCRLGCDLPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMK 389
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQGQEVLHQ 318
D + +L+ H + IK+ P+G L + +D + RLWD+ QG
Sbjct: 390 QDACVHDLQAHSK-EIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTL 448
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
H +PVY ++F DG +A+G D +W+ ++G + +G +F V ++ G
Sbjct: 449 TKHQEPVYSIAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQG-TGGIFEVCWNARGDK 507
Query: 379 LATGSEDNAVKIWDLRK 395
+ + D +V + DLRK
Sbjct: 508 VGASASDGSVCVLDLRK 524
Score = 120 (47.3 bits), Expect = 0.00045, P = 0.00045
Identities = 51/257 (19%), Positives = 108/257 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE---LVQTFRGHDCNVGAIEFHPLP 206
G + C+++P S +A+ S ++W + E Q H G +H +P
Sbjct: 177 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG---WHDVP 233
Query: 207 SEGAVCSL---------ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL 257
S V SL A + DG ++W+ ++ LA+ G + +K++ G ++
Sbjct: 234 SNKDVTSLDWNSDGTLLAMGSYDGFARIWT--ENGNLASTLGQHKGPIFALKWNKKGNYI 291
Query: 258 GTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQGQ 313
+ D + + D + PF + + + + F +C D + L
Sbjct: 292 LSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTF-ASCGTDMCIHVCRLGCDL 350
Query: 314 EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFS 373
V +GH V + + G ++A+ D ++W ++ C+ L+ H K ++++ +S
Sbjct: 351 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWS 410
Query: 374 PDGYHLATGSEDNAVKI 390
P G AT + ++++ +
Sbjct: 411 PTGP--ATSNPNSSIML 425
Score = 119 (46.9 bits), Expect = 0.00058, P = 0.00058
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG------QEVL-H--QEG-HGKP 324
L GHE V ++P L + D + R+W+LN+ Q VL H +EG H P
Sbjct: 175 LRGHES-EVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWHDVP 233
Query: 325 ----VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
V + + DG+++A G D F R+W G L H +F++ ++ G ++
Sbjct: 234 SNKDVTSLDWNSDGTLLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYIL 292
Query: 381 TGSEDNAVKIWD 392
+ D IWD
Sbjct: 293 SAGVDKTTIIWD 304
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 224 (83.9 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 69/255 (27%), Positives = 118/255 (46%)
Query: 146 CSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHD--CNVGAIE 201
C ++ G T+ ++ + D + +AS K+W + L +T +GH N A+
Sbjct: 238 CERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 296
Query: 202 FHPLPSEGAV--CSLASCAQDGSVKLWSLDKDTPLA--NL-EGHEPFRVSRIKFHPSGRF 256
GA + QD L L K+ L+ NL G P R+ S F
Sbjct: 297 TDYALRTGAFEPAEASVNPQDLQGSLQEL-KERALSRYNLVRGQGPERL----VSGSDDF 351
Query: 257 LGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL 316
W + PL + GH+ ++++ F P R + + +D S +LWD G+ +
Sbjct: 352 T-LFLWSPA-EDKKPLTRMTGHQAL-INQVLFSPDSRIVASASFDKSIKLWDGRTGKYLA 408
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG 376
GH VY +++ D ++ +G D+ +VWD++ + M L GH V++VD+SPDG
Sbjct: 409 SLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDG 468
Query: 377 YHLATGSEDNAVKIW 391
+A+G +D ++IW
Sbjct: 469 QRVASGGKDKCLRIW 483
Score = 193 (73.0 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 61/245 (24%), Positives = 112/245 (45%)
Query: 161 SPDSQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+P+ ++VA++S G ++W T CE + T GH +V + + +G L S +
Sbjct: 213 NPECRYVASSSKDGSVRIWDTTAGRCERILT--GHTQSVTCLRWG---GDGL---LYSAS 264
Query: 219 QDGSVKLWSLDKDTPLANLEGH----EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN 274
QD ++K+W L+GH +S +G F + L L
Sbjct: 265 QDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQE 324
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL-HQEGHGKPVYCMSFQGD 333
L+ R + ++ R + D + LW + ++ L GH + + F D
Sbjct: 325 LKERALSRYNLVRGQGPERLVSGSD-DFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPD 383
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+VA+ D ++WD RTG+ + L GH+ +V+ + +S D L +GS D+ +K+WD+
Sbjct: 384 SRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
Query: 394 RKRRL 398
+ ++L
Sbjct: 444 KAQKL 448
Score = 165 (63.1 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 64/218 (29%), Positives = 95/218 (43%)
Query: 181 VPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
V C + GH V ++ F P G LAS + D +V+ W L +TP +GH
Sbjct: 103 VTRC--TSSLEGHSEAVISVAFSPT---GKY--LASGSGDTTVRFWDLSTETPHFTCKGH 155
Query: 241 EPFRVSRIKFHPSGRFLGTCC-------WDHSWRLDTPLANLEGHEPF--RVSRIKFH-- 289
+ +S I + P GR L + C WD S L GH + +S H
Sbjct: 156 RHWVLS-ISWSPDGRKLASGCKNGQILLWDPSTGKQVG-RTLAGHSKWITGLSWEPLHAN 213
Query: 290 PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
P R++ + D S R+WD G+ GH + V C+ + GDG ++ + D +VW
Sbjct: 214 PECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 272
Query: 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
G L+GH V ++ S D Y L TG+ + A
Sbjct: 273 RAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPA 309
Score = 153 (58.9 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 43/141 (30%), Positives = 74/141 (52%)
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
++LEGH +S + F P+G++L + D + R WDL+ +GH V +S+
Sbjct: 108 SSLEGHSEAVIS-VAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSP 166
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCI-MFLEGHLKSVFSVDF-----SPDGYHLATGSEDN 386
DG +A+G + +WD TG+ + L GH K + + + +P+ ++A+ S+D
Sbjct: 167 DGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDG 226
Query: 387 AVKIWDL---RKRRLLKWCTQ 404
+V+IWD R R+L TQ
Sbjct: 227 SVRIWDTTAGRCERILTGHTQ 247
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 64/252 (25%), Positives = 109/252 (43%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELV-QTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
S+SPD + +A+ +G LW + V +T GH + + + PL + +AS
Sbjct: 163 SWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASS 222
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL-DTPLA 273
++DGSV++W L GH V+ +++ G L + D + WR D L
Sbjct: 223 SKDGSVRIWDTTAGRCERILTGHTQ-SVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLC 280
Query: 274 N-LEGHEPFRVSRIKFHPSGRFLGTCCWDH---SWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L+GH + V+ + + L T ++ S DL + L + + Y +
Sbjct: 281 RTLQGHGHW-VNTMALS-TDYALRTGAFEPAEASVNPQDLQGSLQELKERALSR--YNL- 335
Query: 330 FQGDGSVVATGGLDAFGR-VWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
+G G G D F +W + + + GH + V FSPD +A+ S D +
Sbjct: 336 VRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKS 395
Query: 388 VKIWDLRKRRLL 399
+K+WD R + L
Sbjct: 396 IKLWDGRTGKYL 407
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 218 (81.8 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 72/266 (27%), Positives = 121/266 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE-CELVQTFRGHDCNVGAI-EFHPLPS 207
G I F P+ + + ++ + +W V E CE V GH GA+ E H P
Sbjct: 53 GHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHS---GAVMEAHFTP- 108
Query: 208 EGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW--DHS 265
+G+ + +C+ D ++ W + +GH F V+ ++ G+ L C D +
Sbjct: 109 DGS--HIFTCSTDKTLAFWDIATGQRQRRFKGHGNF-VNSVQGSRRGQQL-LCSGSDDRT 164
Query: 266 WRLDTPLANLEGH---EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGH 321
++ H PF+V+ + F +G + + D+ ++WD+ + Q VLH GH
Sbjct: 165 IKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRK-QAVLHHLRGH 223
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT---G-RCIMFLEGHL----KSVFSVDFS 373
+ MS +G + T +D RVWD+R G RC+ +GH K++ +S
Sbjct: 224 SDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWS 283
Query: 374 PDGYHLATGSEDNAVKIWDLRKRRLL 399
P + +GS D V IWD+ RR+L
Sbjct: 284 PGSDKITSGSADRHVYIWDVNTRRIL 309
Score = 208 (78.3 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 64/257 (24%), Positives = 112/257 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + + F+PD H+ T S W + + + F+GH V +++ S
Sbjct: 96 GHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQ----GSRR 151
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
L S + D ++K+W K LE PF+V+ + F +G + + D+ W
Sbjct: 152 GQQLLCSGSDDRTIKIWDARKKHAAHTLES--PFQVTAVCFGDTGEQVISGGIDNEVKIW 209
Query: 267 --RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ---GQEVL----- 316
R L +L GH ++ + P G F+ T D++ R+WD+ G+ +
Sbjct: 210 DIRKQAVLHHLRGHSD-TITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQG 268
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG 376
HQ K + ++ + +G D +WD+ T R + L GH SV +VDFSP
Sbjct: 269 HQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKE 328
Query: 377 YHLATGSEDNAVKIWDL 393
+ +GS D + + ++
Sbjct: 329 PLILSGSSDKTLYLGEI 345
Score = 200 (75.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 56/176 (31%), Positives = 81/176 (46%)
Query: 233 PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLAN---LEGHEPFRVSRI 286
P+ LEGHE + +FHP G L + +D W++ N + GH V
Sbjct: 47 PIMQLEGHEG-EIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSG-AVMEA 104
Query: 287 KFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD--GS-VVATGGLD 343
F P G + TC D + WD+ GQ +GHG + S QG G ++ +G D
Sbjct: 105 HFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGN--FVNSVQGSRRGQQLLCSGSDD 162
Query: 344 AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
++WD R LE + V +V F G + +G DN VKIWD+RK+ +L
Sbjct: 163 RTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVL 217
Score = 200 (75.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 57/216 (26%), Positives = 97/216 (44%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP-LANLEGHEPFRV 245
+ GH+ + EFHP EG + L S D + +W + +D + + GH V
Sbjct: 48 IMQLEGHEGEIFTAEFHP---EGEL--LLSSGFDRQIYIWQVYEDCENVMAMSGHSG-AV 101
Query: 246 SRIKFHPSGRFLGTCCWDHS---WRLDTPLAN--LEGHEPFRVSRIKFHPSGRFLGTCCW 300
F P G + TC D + W + T +GH F V+ ++ G+ L C
Sbjct: 102 MEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNF-VNSVQGSRRGQQL-LCSG 159
Query: 301 --DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
D + ++WD + + H V + F G V +GG+D ++WD+R +
Sbjct: 160 SDDRTIKIWDARK-KHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLH 218
Query: 359 FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
L GH ++ + SP+G + T + DN +++WD+R
Sbjct: 219 HLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVR 254
Score = 182 (69.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 46/131 (35%), Positives = 63/131 (48%)
Query: 268 LDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE-VLHQEGHGKPVY 326
L P+ LEGHE + +FHP G L + +D +W + + E V+ GH V
Sbjct: 44 LQAPIMQLEGHEG-EIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVM 102
Query: 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL-ATGSED 385
F DGS + T D WD+ TG+ +GH V SV S G L +GS+D
Sbjct: 103 EAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDD 162
Query: 386 NAVKIWDLRKR 396
+KIWD RK+
Sbjct: 163 RTIKIWDARKK 173
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 221 (82.9 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 64/250 (25%), Positives = 111/250 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G ++PI+ SP+ + +A+AS G ++W + T GH V + + P G
Sbjct: 178 GHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLAWSP--DSG 235
Query: 210 AVCSLASCAQDGSVKLWSLDKDTP---LANLEGHEPFRVSRIKFHPSGRFLGTC---CWD 263
+LA+ + D +++LW P + +G + R + H R G
Sbjct: 236 ---TLATGSDDKAIRLWDRITAEPAHAVGTQDGDDD--AERGRTHGGTRISGASGIGVGG 290
Query: 264 HSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
L GH + V + F P G L + +D + LWD+ G+ + H
Sbjct: 291 GGGPARGTRRPLLGHHNY-VYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSD 349
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL-EGHLKSVFSVDFSPDGYHLATG 382
PV + F DG++V + D R+WD TG+C+ L +V +V FSP+G ++
Sbjct: 350 PVSGIDFCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAF 409
Query: 383 SEDNAVKIWD 392
+ D+ +++WD
Sbjct: 410 NLDSCIRLWD 419
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 316 LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD 375
L GH +P+ + +G +A+ D R+WD TG I L GH+ V + +SPD
Sbjct: 174 LELRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLAWSPD 233
Query: 376 GYHLATGSEDNAVKIWD 392
LATGS+D A+++WD
Sbjct: 234 SGTLATGSDDKAIRLWD 250
Score = 147 (56.8 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379
GH VYC++F G+++A+G D +WD+R GR + L H V +DF DG +
Sbjct: 304 GHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRDGTLV 363
Query: 380 ATGSEDNAVKIWDLRKRRLLK 400
+ S D ++IWD + L+
Sbjct: 364 VSCSTDGLIRIWDTATGQCLR 384
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 51/174 (29%), Positives = 80/174 (45%)
Query: 237 LEGH-EPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHP 290
L GH +P +++++ P+GR++ + D + W +T + L GH VS + + P
Sbjct: 176 LRGHSQP--IAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMA-GVSCLAWSP 232
Query: 291 SGRFLGTCCWDHSWRLWD---LNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGR 347
L T D + RLWD V Q+G + G + G+ G
Sbjct: 233 DSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRT-HGGTRISGASGIGVGGG 291
Query: 348 VWDLR-TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
R T R ++ GH V+ + FSP G LA+GS D AV +WD+R RL++
Sbjct: 292 GGPARGTRRPLL---GHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMR 342
Score = 53 (23.7 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLW---TVPECELVQTFRGHD 194
VG +S ++SPDS +AT S +LW T V T G D
Sbjct: 219 VGHMAGVSCLAWSPDSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGDD 267
Score = 47 (21.6 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 6/22 (27%), Positives = 16/22 (72%)
Query: 379 LATGSEDNAVKIWDLRKRRLLK 400
+A+ SED + +WD++ + +++
Sbjct: 489 VASASEDGHIVLWDVKSKEVVQ 510
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 223 (83.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 68/268 (25%), Positives = 122/268 (45%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ + +AT S+ G ++WT + L T H + A++++ +
Sbjct: 222 VPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWN---KK 277
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 278 GNF--ILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQSNNTF-ASCSTDMCIHV 333
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
+L D P+ +GH V+ IK+ P+G L +C D + ++W + Q V + H K
Sbjct: 334 CKLGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNK 392
Query: 324 PVYCMSFQ--GDGS-------VVAT---GGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+Y + + G G+ ++A+ D+ R+WD+ G CI L H + V+SV
Sbjct: 393 EIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVA 452
Query: 372 FSPDGYHLATGSEDNAVKIWDLRKRRLL 399
FSPDG +LA+GS D V IW+ + L+
Sbjct: 453 FSPDGRYLASGSFDKCVHIWNTQTGALV 480
Score = 206 (77.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 55/200 (27%), Positives = 98/200 (49%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL- 268
+ ASC+ D + + L +D P+ +GH V+ IK+ P+G L +C D + W +
Sbjct: 321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTN-EVNAIKWDPTGNLLASCSDDMTLKIWSMK 379
Query: 269 -DTPLANLEGHEPFRVSRIKFHPSG------------RFLGTCCWDHSWRLWDLNQGQEV 315
D+ + +L+ H + IK+ P+G L + +D + RLWD+++G +
Sbjct: 380 QDSCVHDLQAHNK-EIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICI 438
Query: 316 LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD 375
H +PVY ++F DG +A+G D +W+ +TG + G +F V ++
Sbjct: 439 HTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAA 497
Query: 376 GYHLATGSEDNAVKIWDLRK 395
G + + D +V + DLRK
Sbjct: 498 GDKVGASASDGSVCVLDLRK 517
Score = 145 (56.1 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 53/245 (21%), Positives = 111/245 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE------CELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R G D
Sbjct: 167 GHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNK 226
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ SEG + LA+ + DG ++W+ KD LA+ G + +K++ G
Sbjct: 227 DVTSLDWN---SEGTL--LATGSYDGFARIWT--KDGNLASTLGQHKGPIFALKWNKKGN 279
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
F+ + D + + D + PF + + + + F +C D + L Q
Sbjct: 280 FILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQ 338
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ + +GH V + + G+++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 339 DRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIK 398
Query: 372 FSPDG 376
+SP G
Sbjct: 399 WSPTG 403
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 148 (57.2 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 32/102 (31%), Positives = 55/102 (53%)
Query: 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVC 212
+ I+ + +P+ + +AT S KLW +P C+L+ TF GH + ++F P+
Sbjct: 480 KDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQV---- 535
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG 254
LA+ + DG++KLW+L + L EGH+ V ++ F G
Sbjct: 536 -LATASADGTIKLWALQDFSCLKTFEGHDA-SVLKVAFVSRG 575
Score = 147 (56.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 283 VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGL 342
++ + P+ + L T D + +LW L + Q + GH + ++C+ F V+AT
Sbjct: 482 INSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASA 541
Query: 343 DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
D ++W L+ C+ EGH SV V F G L + D +K+W ++ ++
Sbjct: 542 DGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVR 599
Score = 143 (55.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 34/114 (29%), Positives = 55/114 (48%)
Query: 283 VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS--VVATG 340
V+ + F P+ L T D + R+WD+ + H G V+ ++F D + ++ +
Sbjct: 112 VATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSS 171
Query: 341 GLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
D RVW L+ C+ L H +V S+ FS DG+ + + D IWDLR
Sbjct: 172 AADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLR 225
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G R + FSP Q +ATAS G KLW + + ++TF GHD +V + F S G
Sbjct: 519 GHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAF---VSRG 575
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
L S DG +KLW++ + + L+ HE
Sbjct: 576 T--QLLSSGSDGLLKLWTIKNNECVRTLDAHE 605
Score = 130 (50.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 34/103 (33%), Positives = 49/103 (47%)
Query: 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAV 211
T P++ +F P S +AT G ++W V C FRG V + FHP P+
Sbjct: 109 TAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPAR--- 165
Query: 212 CSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG 254
L S A D S+++WSL + + LA L H V+ + F G
Sbjct: 166 LLLFSSAADTSIRVWSLQERSCLAVLTAHYS-AVTSLTFSADG 207
Score = 129 (50.5 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 36/152 (23%), Positives = 65/152 (42%)
Query: 245 VSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCC 299
++ + P+ + L T D + W L L GH + ++F P + L T
Sbjct: 482 INSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRR-GLWCVQFSPMDQVLATAS 540
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + +LW L + EGH V ++F G+ + + G D ++W ++ C+
Sbjct: 541 ADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRT 600
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
L+ H V+ + S TG+ D+ V +W
Sbjct: 601 LDAHEDKVWGLHCSRLDDRALTGASDSRVVLW 632
Score = 122 (48.0 bits), Expect = 0.00048, P = 0.00048
Identities = 50/185 (27%), Positives = 77/185 (41%)
Query: 241 EPF-RVSRIKFHPSGRFLGTCCWDHSWRLDTP----LANLEGHEPFRVSRIKFHPSGRFL 295
EPF + +++ +G+ L C LD L +LE + ++ P + L
Sbjct: 22 EPFYKGGKVQLDQTGQHLFCVCGTRVNILDVASGAVLRSLEQEDQEDITAFDLSPDDKVL 81
Query: 296 GTCCWDHSWRLWDLNQGQEV-LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
T W +G L + H PV M+F +++ATGG D RVWD+
Sbjct: 82 VTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDVV-- 139
Query: 355 RCI--MFLEGHLKSVFSVDFSPDGYHLA--TGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
RC G V V F PD L + + D ++++W L++R L L +
Sbjct: 140 RCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCL---AVLTAHYS 196
Query: 411 GVTSL 415
VTSL
Sbjct: 197 AVTSL 201
Score = 113 (44.8 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 318 QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY 377
Q H K + ++ + ++ATG D ++W L + + GH + ++ V FSP
Sbjct: 475 QHCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQ 534
Query: 378 HLATGSEDNAVKIWDLRKRRLLK 400
LAT S D +K+W L+ LK
Sbjct: 535 VLATASADGTIKLWALQDFSCLK 557
Score = 99 (39.9 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 29/109 (26%), Positives = 49/109 (44%)
Query: 289 HPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG--DGSVVATGGLDAFG 346
H +G L DH+ L+D + G+ + V + F G D VV
Sbjct: 302 HAAGLLLSVTA-DHNLLLYDARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCL- 359
Query: 347 RVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
+V+DL+T C L GH V ++D G A+ ++D ++++W + K
Sbjct: 360 KVFDLQTSAC-QILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNK 407
Score = 82 (33.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 130 ARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT 189
AR+ L+K Y +V D R + P+ HV AS S K++ + + Q
Sbjct: 321 ARSLRLRKQFAG---YSEEVLDVRFLG-----PEDSHVVVASNSPCLKVFDL-QTSACQI 371
Query: 190 FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLA 235
GH V A++ +G + ASCA+D S+++W ++K +A
Sbjct: 372 LHGHTDIVLALDVF---RKGRL--FASCAKDQSIRVWRMNKSGEVA 412
Score = 73 (30.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 25/82 (30%), Positives = 35/82 (42%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL---HQEGHGKPV--YCMS 329
L GH ++ F GR +C D S R+W +N+ EV GH V C S
Sbjct: 372 LHGHTDIVLALDVFR-KGRLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCS 430
Query: 330 FQGDGSVVATGGLDAFGRVWDL 351
+ +V TG D ++W L
Sbjct: 431 RLKETFLV-TGSQDCTVKLWPL 451
Score = 48 (22.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 192 GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
GH +VG I L L + +QD +VKLW L + L+ GHE
Sbjct: 419 GHTHSVGTICCSRLKET----FLVTGSQDCTVKLWPLP-EALLSKGTGHE 463
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 148 (57.2 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 32/102 (31%), Positives = 55/102 (53%)
Query: 153 RPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVC 212
+ I+ + +P+ + +AT S KLW +P C+L+ TF GH + ++F P+
Sbjct: 480 KDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQV---- 535
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG 254
LA+ + DG++KLW+L + L EGH+ V ++ F G
Sbjct: 536 -LATASADGTIKLWALQDFSCLKTFEGHDA-SVLKVAFVSRG 575
Score = 147 (56.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 283 VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGL 342
++ + P+ + L T D + +LW L + Q + GH + ++C+ F V+AT
Sbjct: 482 INSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASA 541
Query: 343 DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
D ++W L+ C+ EGH SV V F G L + D +K+W ++ ++
Sbjct: 542 DGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVR 599
Score = 143 (55.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 34/114 (29%), Positives = 55/114 (48%)
Query: 283 VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS--VVATG 340
V+ + F P+ L T D + R+WD+ + H G V+ ++F D + ++ +
Sbjct: 112 VATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSS 171
Query: 341 GLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
D RVW L+ C+ L H +V S+ FS DG+ + + D IWDLR
Sbjct: 172 AADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLR 225
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G R + FSP Q +ATAS G KLW + + ++TF GHD +V + F S G
Sbjct: 519 GHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAF---VSRG 575
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
L S DG +KLW++ + + L+ HE
Sbjct: 576 T--QLLSSGSDGLLKLWTIKNNECVRTLDAHE 605
Score = 130 (50.8 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 34/103 (33%), Positives = 49/103 (47%)
Query: 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAV 211
T P++ +F P S +AT G ++W V C FRG V + FHP P+
Sbjct: 109 TAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPAR--- 165
Query: 212 CSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSG 254
L S A D S+++WSL + + LA L H V+ + F G
Sbjct: 166 LLLFSSAADTSIRVWSLQERSCLAVLTAHYS-AVTSLTFSADG 207
Score = 129 (50.5 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 36/152 (23%), Positives = 65/152 (42%)
Query: 245 VSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCC 299
++ + P+ + L T D + W L L GH + ++F P + L T
Sbjct: 482 INSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRR-GLWCVQFSPMDQVLATAS 540
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + +LW L + EGH V ++F G+ + + G D ++W ++ C+
Sbjct: 541 ADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRT 600
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
L+ H V+ + S TG+ D+ V +W
Sbjct: 601 LDAHEDKVWGLHCSRLDDRALTGASDSRVVLW 632
Score = 122 (48.0 bits), Expect = 0.00048, P = 0.00048
Identities = 50/185 (27%), Positives = 77/185 (41%)
Query: 241 EPF-RVSRIKFHPSGRFLGTCCWDHSWRLDTP----LANLEGHEPFRVSRIKFHPSGRFL 295
EPF + +++ +G+ L C LD L +LE + ++ P + L
Sbjct: 22 EPFYKGGKVQLDQTGQHLFCVCGTRVNILDVASGAVLRSLEQEDQEDITAFDLSPDDKVL 81
Query: 296 GTCCWDHSWRLWDLNQGQEV-LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
T W +G L + H PV M+F +++ATGG D RVWD+
Sbjct: 82 VTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDVV-- 139
Query: 355 RCI--MFLEGHLKSVFSVDFSPDGYHLA--TGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
RC G V V F PD L + + D ++++W L++R L L +
Sbjct: 140 RCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCL---AVLTAHYS 196
Query: 411 GVTSL 415
VTSL
Sbjct: 197 AVTSL 201
Score = 113 (44.8 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 318 QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY 377
Q H K + ++ + ++ATG D ++W L + + GH + ++ V FSP
Sbjct: 475 QRCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQ 534
Query: 378 HLATGSEDNAVKIWDLRKRRLLK 400
LAT S D +K+W L+ LK
Sbjct: 535 VLATASADGTIKLWALQDFSCLK 557
Score = 100 (40.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 29/109 (26%), Positives = 50/109 (45%)
Query: 289 HPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG--DGSVVATGGLDAFG 346
H +G L DH+ L+D + + G+ + V + F G D VV
Sbjct: 302 HAAGLLLSVTA-DHNLLLYDAHSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCL- 359
Query: 347 RVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
+V+DL+T C L GH V ++D G A+ ++D ++++W + K
Sbjct: 360 KVFDLQTSAC-QILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNK 407
Score = 77 (32.2 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 162 PDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221
P+ HV AS S K++ + + Q GH V A++ +G + ASCA+D
Sbjct: 345 PEDSHVVVASNSPCLKVFDL-QTSACQILHGHTDIVLALDVF---RKGRL--FASCAKDQ 398
Query: 222 SVKLWSLDKDTPLA 235
S+++W ++K +A
Sbjct: 399 SIRVWRMNKSGEVA 412
Score = 73 (30.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 25/82 (30%), Positives = 35/82 (42%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL---HQEGHGKPV--YCMS 329
L GH ++ F GR +C D S R+W +N+ EV GH V C S
Sbjct: 372 LHGHTDIVLALDVFR-KGRLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCS 430
Query: 330 FQGDGSVVATGGLDAFGRVWDL 351
+ +V TG D ++W L
Sbjct: 431 RLKETFLV-TGSQDCTVKLWPL 451
Score = 48 (22.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 192 GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
GH +VG I L L + +QD +VKLW L + L+ GHE
Sbjct: 419 GHTHSVGTICCSRLKET----FLVTGSQDCTVKLWPLP-EALLSKGTGHE 463
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 222 (83.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 66/252 (26%), Positives = 116/252 (46%)
Query: 146 CSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHD--CNVGAIE 201
C ++ G T+ ++ + D + +AS K+W + L +T +GH N A+
Sbjct: 238 CERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS 296
Query: 202 FHPLPSEGAV--CSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGT 259
GA + AQD L L K+ L+ + R+ S F
Sbjct: 297 TDYALRTGAFEPAEASVNAQDLRGSLQEL-KERALSRYNLVRGRGLERL-VSGSDDFT-L 353
Query: 260 CCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE 319
W + PLA + GH+ ++++ F P R + + +D S +LWD G+ +
Sbjct: 354 FLWSPA-EDKKPLARMTGHQAL-INQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLR 411
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379
GH VY +++ D ++ +G D+ +VWD++ + L GH V++VD+SPDG +
Sbjct: 412 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRV 471
Query: 380 ATGSEDNAVKIW 391
A+G +D ++IW
Sbjct: 472 ASGGKDKCLRIW 483
Score = 190 (71.9 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 60/245 (24%), Positives = 113/245 (46%)
Query: 161 SPDSQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+P+ ++VA++S G ++W T CE + T GH +V + + +G L S +
Sbjct: 213 NPECRYVASSSKDGSVRVWDTTAGRCERILT--GHTQSVTCLRWG---GDGL---LYSAS 264
Query: 219 QDGSVKLWSLDKDTPLANLEGH----EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN 274
QD ++K+W L+GH +S +G F ++ L L
Sbjct: 265 QDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQE 324
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL-HQEGHGKPVYCMSFQGD 333
L+ R + ++ R + D + LW + ++ L GH + + F D
Sbjct: 325 LKERALSRYNLVRGRGLERLVSGSD-DFTLFLWSPAEDKKPLARMTGHQALINQVLFSPD 383
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
++A+ D ++WD RTG+ + L GH+ +V+ + +S D L +GS D+ +K+WD+
Sbjct: 384 SRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 443
Query: 394 RKRRL 398
+ ++L
Sbjct: 444 KAQKL 448
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 68/228 (29%), Positives = 100/228 (43%)
Query: 181 VPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
V C + GH V ++ F P G LAS + D +V+ W L +TP +GH
Sbjct: 103 VTRC--TSSLEGHSEAVISVAFSPT---GKY--LASGSGDTTVRFWDLSTETPHFTCQGH 155
Query: 241 EPFRVSRIKFHPSGRFLGTCC-------WDHSWRLDTPLANLEGHEPF--RVSRIKFH-- 289
+ +S I + P G+ L + C WD S A L GH + +S H
Sbjct: 156 RHWVLS-ISWSPDGKKLASGCKNGQILLWDPSTGKQVGRA-LAGHSKWITALSWEPLHAN 213
Query: 290 PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
P R++ + D S R+WD G+ GH + V C+ + GDG ++ + D +VW
Sbjct: 214 PECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVW 272
Query: 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA---VKIWDLR 394
G L+GH V ++ S D Y L TG+ + A V DLR
Sbjct: 273 RAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQDLR 319
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 42/141 (29%), Positives = 75/141 (53%)
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
++LEGH +S + F P+G++L + D + R WDL+ +GH V +S+
Sbjct: 108 SSLEGHSEAVIS-VAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSP 166
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCI-MFLEGHLKSVFSVDF-----SPDGYHLATGSEDN 386
DG +A+G + +WD TG+ + L GH K + ++ + +P+ ++A+ S+D
Sbjct: 167 DGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDG 226
Query: 387 AVKIWDL---RKRRLLKWCTQ 404
+V++WD R R+L TQ
Sbjct: 227 SVRVWDTTAGRCERILTGHTQ 247
Score = 129 (50.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 64/252 (25%), Positives = 109/252 (43%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELV-QTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
S+SPD + +A+ +G LW + V + GH + A+ + PL + +AS
Sbjct: 163 SWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASS 222
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL-DTPLA 273
++DGSV++W L GH V+ +++ G L + D + WR D L
Sbjct: 223 SKDGSVRVWDTTAGRCERILTGHTQ-SVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLC 280
Query: 274 N-LEGHEPFRVSRIKFHPSGRFLGTCCWDH---SWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L+GH + V+ + + L T ++ S DL + L + + Y +
Sbjct: 281 RTLQGHGHW-VNTMALS-TDYALRTGAFEPAEASVNAQDLRGSLQELKERALSR--YNL- 335
Query: 330 FQGDGSVVATGGLDAFGR-VWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
+G G G D F +W + + + GH + V FSPD +A+ S D +
Sbjct: 336 VRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKS 395
Query: 388 VKIWDLRKRRLL 399
+K+WD R + L
Sbjct: 396 IKLWDGRTGKYL 407
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 224 (83.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 61/184 (33%), Positives = 92/184 (50%)
Query: 219 QDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLAN- 274
Q G KL++L +++P + V I F P G++L T D W L T
Sbjct: 342 QTGK-KLFTLHEESP----DPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRY 396
Query: 275 -LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
GHE + + F +GRF+ + D + RLWD+ GQ +L E V ++ +
Sbjct: 397 VFSGHEQ-DIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTAIAISPN 454
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+A G LD RVW + +G + LEGH +SV+S+ FSPD L +GS D +K+W+L
Sbjct: 455 DQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWEL 513
Query: 394 RKRR 397
+ R
Sbjct: 514 QATR 517
Score = 219 (82.2 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 68/251 (27%), Positives = 113/251 (45%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+FSPD +++ T + KLW + ++ F GH+ ++ +++F G + S +
Sbjct: 367 AFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFS---HNGRF--IVSGS 421
Query: 219 QDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD-TPLAN 274
D + +LW ++ + LE V+ I P+ +F+ D W + T +
Sbjct: 422 GDRTARLWDVETGQCILKLEIENG--VTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVER 479
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ----GQEVLHQEGHGKPVYC--- 327
LEGH+ V I F P L + D + ++W+L G + EG K Y
Sbjct: 480 LEGHKE-SVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHT 538
Query: 328 -----MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
++ D +G D + WDL+TG+ + +GH SV SV FSPDG A+G
Sbjct: 539 DFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASG 598
Query: 383 SEDNAVKIWDL 393
S D +IW +
Sbjct: 599 SGDLRARIWSI 609
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 72/249 (28%), Positives = 111/249 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
KL+T+ E E R D V I F P +G L + +D +KLW L
Sbjct: 346 KLFTLHE-ESPDPSR--DLYVRTIAFSP---DGKY--LVTGTEDRQIKLWDLSTQKVRYV 397
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLANLEGHEPFRVSRIKFHPSGR 293
GHE + + F +GRF+ + D + W ++T L+ V+ I P+ +
Sbjct: 398 FSGHEQ-DIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQ 456
Query: 294 FLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT 353
F+ D R+W ++ G V EGH + VY ++F D S++ +G LD +VW+L+
Sbjct: 457 FIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQA 515
Query: 354 GR------------CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW 401
R C GH V SV SPD +GS+D +++ WDL+ +
Sbjct: 516 TRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLT 575
Query: 402 CTQLLPNSI 410
C Q NS+
Sbjct: 576 C-QGHKNSV 583
Score = 198 (74.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 52/162 (32%), Positives = 82/162 (50%)
Query: 242 PFRVSRIKFHPSGRFLGTCCWDHSWRLDTP----LANL--EGHEPFR---VSRIKFHPSG 292
P V +KF +G++L T C + D L L E +P R V I F P G
Sbjct: 313 PSVVCCVKFSNNGKYLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDG 372
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
++L T D +LWDL+ Q+V + GH + +Y + F +G + +G D R+WD+
Sbjct: 373 KYLVTGTEDRQIKLWDLST-QKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDV 431
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
TG+CI+ LE V ++ SP+ +A GS D +++W +
Sbjct: 432 ETGQCILKLEIE-NGVTAIAISPNDQFIAVGSLDQIIRVWSV 472
Score = 137 (53.3 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 59/219 (26%), Positives = 86/219 (39%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G + I FS + + + + S +LW V + + + V AI P
Sbjct: 400 GHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIEN-GVTAIAISPNDQFI 458
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
AV SL D +++WS+ T + LEGH+ V I F P L + D + W
Sbjct: 459 AVGSL-----DQIIRVWSVS-GTLVERLEGHKE-SVYSIAFSPDSSILLSGSLDKTIKVW 511
Query: 267 RLDT----------P----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG 312
L P A GH F +S + P R+ + D S + WDL G
Sbjct: 512 ELQATRSVGLSAIKPEGICKATYTGHTDFVLS-VAVSPDSRWGLSGSKDRSMQFWDLQTG 570
Query: 313 QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
Q L +GH V + F DG A+G D R+W +
Sbjct: 571 QSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
Score = 132 (51.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 32/100 (32%), Positives = 55/100 (55%)
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
R++++N ++H H V C+ F +G +ATG A V+D++TG+ + L
Sbjct: 300 RVFNIN----LVHTLEHPSVVCCVKFSNNGKYLATGCNQA-ANVFDVQTGKKLFTLHEES 354
Query: 365 KS------VFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
V ++ FSPDG +L TG+ED +K+WDL +++
Sbjct: 355 PDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKV 394
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 216 (81.1 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 72/242 (29%), Positives = 110/242 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + S L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG-YDSR----LLVSASQDGKLIIW----DSYTTNKMHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG ++ D+ + L T N L GH + +S +F G+ +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGY-LSCCRFLDDGQII 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ GH V +S D +G DA ++WD+R G
Sbjct: 159 -TSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK-RRLLKWCTQLLPNSI-GVT 413
C GH+ + +V F P GY ATGS+D +++DLR + LL + N I G+T
Sbjct: 218 CRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLYSHD---NIICGIT 274
Query: 414 SL 415
S+
Sbjct: 275 SV 276
Score = 197 (74.4 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 61/207 (29%), Positives = 89/207 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D Q + T+S C LW + + TF GH +V ++ P
Sbjct: 141 GHTGYLSCCRFLDDGQ-IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSP----- 194
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ + S A D S KLW + + GH ++ + F PSG T D + RL
Sbjct: 195 DLKTFVSGACDASSKLWDIRDGMCRQSFTGHIS-DINAVSFFPSGYAFATGSDDATCRLF 253
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD +G GH
Sbjct: 254 DLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRAGVLAGHDN 313
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F R+W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 159 (61.0 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 61/246 (24%), Positives = 105/246 (42%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFRGHDCNVGAIEFHPLPSEGAVCSLAS 216
C+++P +VA +C ++ + E V+ R + G + +G + + +
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG 162
Query: 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS--WRLDTPLA 273
D + LW ++ GH V + P + F+ C S W + +
Sbjct: 163 ---DTTCALWDIETGQQTTTFTGHSG-DVMSLSLSPDLKTFVSGACDASSKLWDIRDGMC 218
Query: 274 --NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC---- 327
+ GH ++ + F PSG T D + RL+DL QE+L H + C
Sbjct: 219 RQSFTGHIS-DINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLYS-HDN-IICGITS 275
Query: 328 MSFQGDGSVVATGGLDAFGRVWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
++F G ++ G D VWD L+ GR + L GH V + + DG +ATGS D+
Sbjct: 276 VAFSKSGRLLLAGYDDFNCSVWDALKGGRAGV-LAGHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 387 AVKIWD 392
++IW+
Sbjct: 335 FLRIWN 340
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 53/195 (27%), Positives = 87/195 (44%)
Query: 211 VCSLASC-AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+CS+ + ++G+V++ ++ P GH + +S +F G+ + T D + W
Sbjct: 120 ICSIYNLKTREGNVRV---SRELP-----GHTGY-LSCCRFLDDGQII-TSSGDTTCALW 169
Query: 267 RLDT--PLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
++T GH V + P + F+ C D S +LWD+ G GH
Sbjct: 170 DIETGQQTTTFTGHSG-DVMSLSLSPDLKTFVSGAC-DASSKLWDIRDGMCRQSFTGHIS 227
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH---LKSVFSVDFSPDGYHLA 380
+ +SF G ATG DA R++DLR + ++ L H + + SV FS G L
Sbjct: 228 DINAVSFFPSGYAFATGSDDATCRLFDLRADQELL-LYSHDNIICGITSVAFSKSGRLLL 286
Query: 381 TGSEDNAVKIWDLRK 395
G +D +WD K
Sbjct: 287 AGYDDFNCSVWDALK 301
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 216 (81.1 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 72/242 (29%), Positives = 110/242 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + S L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG-YDSR----LLVSASQDGKLIIW----DSYTTNKMHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG ++ D+ + L T N L GH + +S +F G+ +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGY-LSCCRFLDDGQII 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ GH V +S D +G DA ++WD+R G
Sbjct: 159 -TSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK-RRLLKWCTQLLPNSI-GVT 413
C GH+ + +V F P GY ATGS+D +++DLR + LL + N I G+T
Sbjct: 218 CRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLYSHD---NIICGIT 274
Query: 414 SL 415
S+
Sbjct: 275 SV 276
Score = 195 (73.7 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 61/207 (29%), Positives = 89/207 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D Q + T+S C LW + + TF GH +V ++ P
Sbjct: 141 GHTGYLSCCRFLDDGQ-IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSP----- 194
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ + S A D S KLW + + GH ++ + F PSG T D + RL
Sbjct: 195 DLKTFVSGACDASSKLWDIRDGMCRQSFTGHIS-DINAVSFFPSGYAFATGSDDATCRLF 253
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD +G GH
Sbjct: 254 DLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGVLAGHDN 313
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F R+W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 61/246 (24%), Positives = 105/246 (42%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFRGHDCNVGAIEFHPLPSEGAVCSLAS 216
C+++P +VA +C ++ + E V+ R + G + +G + + +
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG 162
Query: 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS--WRLDTPLA 273
D + LW ++ GH V + P + F+ C S W + +
Sbjct: 163 ---DTTCALWDIETGQQTTTFTGHSG-DVMSLSLSPDLKTFVSGACDASSKLWDIRDGMC 218
Query: 274 --NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC---- 327
+ GH ++ + F PSG T D + RL+DL QE+L H + C
Sbjct: 219 RQSFTGHIS-DINAVSFFPSGYAFATGSDDATCRLFDLRADQELLLYS-HDN-IICGITS 275
Query: 328 MSFQGDGSVVATGGLDAFGRVWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
++F G ++ G D VWD L+ GR + L GH V + + DG +ATGS D+
Sbjct: 276 VAFSKSGRLLLAGYDDFNCSVWDALKGGRSGV-LAGHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 387 AVKIWD 392
++IW+
Sbjct: 335 FLRIWN 340
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 53/195 (27%), Positives = 87/195 (44%)
Query: 211 VCSLASC-AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+CS+ + ++G+V++ ++ P GH + +S +F G+ + T D + W
Sbjct: 120 ICSIYNLKTREGNVRV---SRELP-----GHTGY-LSCCRFLDDGQII-TSSGDTTCALW 169
Query: 267 RLDT--PLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
++T GH V + P + F+ C D S +LWD+ G GH
Sbjct: 170 DIETGQQTTTFTGHSG-DVMSLSLSPDLKTFVSGAC-DASSKLWDIRDGMCRQSFTGHIS 227
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH---LKSVFSVDFSPDGYHLA 380
+ +SF G ATG DA R++DLR + ++ L H + + SV FS G L
Sbjct: 228 DINAVSFFPSGYAFATGSDDATCRLFDLRADQELL-LYSHDNIICGITSVAFSKSGRLLL 286
Query: 381 TGSEDNAVKIWDLRK 395
G +D +WD K
Sbjct: 287 AGYDDFNCSVWDALK 301
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 215 (80.7 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 68/263 (25%), Positives = 118/263 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T IS FS D +A+AS LW+ L+ + GH + + +
Sbjct: 41 GHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS--DSH 98
Query: 210 AVCSLASCAQDGSVKLWSLDKDTP---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
CS AS D ++++W D +P L L GH F V + F+P + + +D +
Sbjct: 99 YTCS-AS--DDCTLRIW--DARSPYECLKVLRGHTNF-VFCVNFNPPSNLIVSGSFDETI 152
Query: 266 --WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
W + T + ++ H +S + F+ G + + D S ++WD +G +
Sbjct: 153 RIWEVKTGKCVRMIKAHS-MPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDD 211
Query: 322 GKPVYCMS-FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD--FS-PDGY 377
P + F +G + LD+ ++ + TG+ + GH VF + FS +G
Sbjct: 212 KSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGK 271
Query: 378 HLATGSEDNAVKIWDLRKRRLLK 400
++ +GSEDN V +WDL+ R +L+
Sbjct: 272 YIVSGSEDNCVYLWDLQARNILQ 294
Score = 210 (79.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 51/194 (26%), Positives = 91/194 (46%)
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD 269
S + G+V ++ + L LEGH +S +KF G L + D + W
Sbjct: 17 STGNAGTSGNVPIYKPYRH--LKTLEGHTA-AISCVKFSNDGNLLASASVDKTMILWSAT 73
Query: 270 --TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVY 326
+ + EGH +S + + + + D + R+WD E L GH V+
Sbjct: 74 NYSLIHRYEGHSS-GISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVF 132
Query: 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
C++F +++ +G D R+W+++TG+C+ ++ H + SV F+ DG + + S D
Sbjct: 133 CVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDG 192
Query: 387 AVKIWDLRKRRLLK 400
+ KIWD ++ LK
Sbjct: 193 SCKIWDAKEGTCLK 206
Score = 198 (74.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 66/265 (24%), Positives = 119/265 (44%)
Query: 140 TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE-CELVQTFRGHDCNVG 198
T+ S+ G + IS ++S DS + +AS ++W E ++ RGH V
Sbjct: 73 TNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVF 132
Query: 199 AIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL- 257
+ F+P PS + S + D ++++W + + ++ H +S + F+ G +
Sbjct: 133 CVNFNP-PSN----LIVSGSFDETIRIWEVKTGKCVRMIKAHS-MPISSVHFNRDGSLIV 186
Query: 258 -----GTC-CWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ 311
G+C WD + T L L + VS KF P+G+F+ D + +L +
Sbjct: 187 SASHDGSCKIWDA--KEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYAT 244
Query: 312 GQEVLHQEGHGKPVYCMS--FQ-GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVF 368
G+ + GH V+C++ F +G + +G D +WDL+ + LEGH +V
Sbjct: 245 GKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVI 304
Query: 369 SVDFSPDGYHLATGSE--DNAVKIW 391
SV P +++ D ++IW
Sbjct: 305 SVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 194 (73.4 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 55/223 (24%), Positives = 103/223 (46%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
++T GH + ++F ++G + LAS + D ++ LWS + + EGH +S
Sbjct: 36 LKTLEGHTAAISCVKFS---NDGNL--LASASVDKTMILWSATNYSLIHRYEGHSS-GIS 89
Query: 247 RIKFHPSGRFLGTC-----CWDHSWRLDTP---LANLEGHEPFRVSRIKFHPSGRFLGTC 298
+ + + TC C W +P L L GH F V + F+P + +
Sbjct: 90 DLAWSSDSHY--TCSASDDCTLRIWDARSPYECLKVLRGHTNF-VFCVNFNPPSNLIVSG 146
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
+D + R+W++ G+ V + H P+ + F DGS++ + D ++WD + G C+
Sbjct: 147 SFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLK 206
Query: 359 FL-EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
L + +V FSP+G + + D+ +K+ + + LK
Sbjct: 207 TLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLK 249
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 221 (82.9 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 68/265 (25%), Positives = 117/265 (44%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
V + ++ ++ D +A S+ G ++WT L T H + A++++ +
Sbjct: 232 VPSNKDVTSLDWNSDGTLLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWN---KK 287
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HS 265
G + S D + +W H + + + + F +C D H
Sbjct: 288 GNY--VLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD-VDWQNNMTF-ASCSTDMCIHV 343
Query: 266 WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
RL D P+ +GH V+ IK+ PSG L +C D + ++W + Q V + H K
Sbjct: 344 CRLGCDHPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSK 402
Query: 324 PVYCMSFQGDGS---------VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSP 374
+Y + + G ++A+ D+ R+WD+ G C L H + V+SV FSP
Sbjct: 403 EIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSP 462
Query: 375 DGYHLATGSEDNAVKIWDLRKRRLL 399
DG +LA+GS D V IW+ + L+
Sbjct: 463 DGKYLASGSFDKYVHIWNTQSGSLV 487
Score = 203 (76.5 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 65/262 (24%), Positives = 115/262 (43%)
Query: 147 SQVGDTR-PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPL 205
S +G + PI ++ +V +A +W E Q F H +++
Sbjct: 270 STLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 329
Query: 206 PSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
+ ASC+ D + + L D P+ +GH V+ IK+ PSG L +C D +
Sbjct: 330 ------MTFASCSTDMCIHVCRLGCDHPVKTFQGHTN-EVNAIKWDPSGMLLASCSDDMT 382
Query: 266 ---WRL--DTPLANLEGHEPFRVSRIKFHPSGR---------FLGTCCWDHSWRLWDLNQ 311
W + D + +L+ H + IK+ P+G L + +D + RLWD+ Q
Sbjct: 383 LKIWSMKQDACVHDLQAHSK-EIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQ 441
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
G H +PVY ++F DG +A+G D + +W+ ++G + +G +F V
Sbjct: 442 GVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQG-TGGIFEVC 500
Query: 372 FSPDGYHLATGSEDNAVKIWDL 393
++ G + + D +V + DL
Sbjct: 501 WNARGDKVGASASDGSVCVLDL 522
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 51/259 (19%), Positives = 116/259 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE------CELV--QTFR--GHDC---- 195
G + C+++P S +A+ S ++W + E +LV R GHD
Sbjct: 177 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 236
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
+V +++++ S+G + ++ S DG ++W+ ++ LA+ G + +K++ G
Sbjct: 237 DVTSLDWN---SDGTLLAMGS--YDGFARIWT--ENGNLASTLGQHKGPIFALKWNKKGN 289
Query: 256 FLGTCCWDHSWRL-DTPLANLEGHEPFRVSR---IKFHPSGRFLGTCCWDHSWRLWDLNQ 311
++ + D + + D + PF + + + + F +C D + L
Sbjct: 290 YVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF-ASCSTDMCIHVCRLGC 348
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
V +GH V + + G ++A+ D ++W ++ C+ L+ H K ++++
Sbjct: 349 DHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIK 408
Query: 372 FSPDGYHLATGSEDNAVKI 390
+SP G AT + ++++ +
Sbjct: 409 WSPTGP--ATSNPNSSIML 425
Score = 119 (46.9 bits), Expect = 0.00058, P = 0.00058
Identities = 37/132 (28%), Positives = 59/132 (44%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG------QEVL-H---QEGHGKP 324
L GHE V ++P L + D + R+W+LN+ Q VL H + GH P
Sbjct: 175 LRGHES-EVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 233
Query: 325 ----VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
V + + DG+++A G D F R+W G L H +F++ ++ G ++
Sbjct: 234 SNKDVTSLDWNSDGTLLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYVL 292
Query: 381 TGSEDNAVKIWD 392
+ D IWD
Sbjct: 293 SAGVDKTTIIWD 304
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 222 (83.2 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 74/277 (26%), Positives = 127/277 (45%)
Query: 132 NQELQKHLTSLSIYCSQ-VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTF 190
N E K +T L S+ GD + +FSPD +++AT ++W + + + +
Sbjct: 326 NVETGKLITLLQEESSKREGDLY-VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLL 384
Query: 191 RGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKF 250
GH+ + +++F +G +L S + D +V LW ++ L H V+ + F
Sbjct: 385 TGHEQEIYSLDFS---KDGK--TLVSGSGDRTVCLWDVEAGEQKLIL--HTDDGVTTVMF 437
Query: 251 HPSGRFLGTCCWDHSWRL----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 306
P G+F+ D R+ T + L GHE V + F P G++L + D++ +L
Sbjct: 438 SPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEE-SVYSVAFSPDGKYLVSGSLDNTIKL 496
Query: 307 WDLNQGQEV---LHQEG---------HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
W+L V +++EG H + ++ DG + +G D + W +
Sbjct: 497 WELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSP 556
Query: 355 RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
+ L+GH SV SV SP+G+ ATGS D +IW
Sbjct: 557 HSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 593
Score = 215 (80.7 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 55/157 (35%), Positives = 82/157 (52%)
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRL-DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCC 299
V + F P G++L T D R+ D L GHE + + F G+ L +
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQ-EIYSLDFSKDGKTLVSGS 407
Query: 300 WDHSWRLWDLNQGQE--VLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI 357
D + LWD+ G++ +LH + G V + F DG +A G LD R+W +G +
Sbjct: 408 GDRTVCLWDVEAGEQKLILHTDD-G--VTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLV 463
Query: 358 MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
L GH +SV+SV FSPDG +L +GS DN +K+W+L+
Sbjct: 464 EQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQ 500
Score = 177 (67.4 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 46/153 (30%), Positives = 72/153 (47%)
Query: 248 IKFHPSGRFLGTCCWDHS--WRLDT-PLANLEGHEPFR------VSRIKFHPSGRFLGTC 298
++F G+FL T C + + ++T L L E + V + F P G++L T
Sbjct: 305 VRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATG 364
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
D R+WD+ Q + GH + +Y + F DG + +G D +WD+ G +
Sbjct: 365 VEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKL 424
Query: 359 FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
L V +V FSPDG +A GS D ++IW
Sbjct: 425 ILHTD-DGVTTVMFSPDGQFIAAGSLDKVIRIW 456
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 40/114 (35%), Positives = 62/114 (54%)
Query: 286 IKFHPSGRFLGTCCWDHSWRLWDLNQGQEV-LHQEGHGK---PVYCMS--FQGDGSVVAT 339
++F G+FL T C + + ++++ G+ + L QE K +Y S F DG +AT
Sbjct: 305 VRFSADGKFLATGC-NRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLAT 363
Query: 340 GGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G D R+WD+ R L GH + ++S+DFS DG L +GS D V +WD+
Sbjct: 364 GVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDV 417
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 36/97 (37%), Positives = 54/97 (55%)
Query: 314 EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL-------EGHLKS 366
++LH H + + F DG +ATG + V+++ TG+ I L EG L
Sbjct: 291 QLLHTLEHTSVICYVRFSADGKFLATG-CNRAAMVFNVETGKLITLLQEESSKREGDLY- 348
Query: 367 VFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
V SV FSPDG +LATG ED ++IWD+ ++R+ + T
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLT 385
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 225 (84.3 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 72/245 (29%), Positives = 113/245 (46%)
Query: 148 QVGDTRPIS-YCS---FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203
QV D P+ YC+ F+P + + + ++S W C+L + + +E H
Sbjct: 647 QVADEAPLQIYCAGLVFAPQTALIRS-NFSEDLPSWI---CQLPKVNEKWGAELQTLEGH 702
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
S LAS + D +V+LW + LEGH + +S + F P GR L + +D
Sbjct: 703 ---SNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLS-VAFSPDGRLLASGSFD 758
Query: 264 HSWRLDTPLAN-----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
+ RL P L GH + V + F P GR L + +D + RLWD G
Sbjct: 759 KTVRLWDPATGSLQQTLRGHSNW-VRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTL 817
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC--IMFLEGHLKSVFSVDFSPDG 376
GH V ++F DG ++A+G D R+WD TG + ++G +V + FS DG
Sbjct: 818 RGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKG---TVTELQFSQDG 874
Query: 377 YHLAT 381
+++T
Sbjct: 875 SYIST 879
Score = 224 (83.9 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 63/170 (37%), Positives = 86/170 (50%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
LEGH + +S + F P GR L + +D + RLWD G GH V ++F DG
Sbjct: 733 LEGHSGWVLS-VAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDG 791
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+G D R+WD TG L GH +V SV FSPDG LA+GS D V++WD
Sbjct: 792 RLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPA 851
Query: 395 KRRLLKWCTQLLPNSIGVTSLLTD-LYIDV-LESLN--PGIGNIISSALK 440
L + T ++ ++ D YI L SLN GN +SS+ K
Sbjct: 852 TGTLQQ--TLIIKGTVTELQFSQDGSYISTNLGSLNIQSRCGNNLSSSPK 899
Score = 178 (67.7 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 40/92 (43%), Positives = 50/92 (54%)
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D + RLWD G EGH V ++F DG ++A+G D R+WD TG L
Sbjct: 716 DETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTL 775
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
GH V SV FSPDG LA+GS D V++WD
Sbjct: 776 RGHSNWVRSVAFSPDGRLLASGSFDKTVRLWD 807
Score = 141 (54.7 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 303 SW--RLWDLNQ--GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
SW +L +N+ G E+ EGH V+ +V+A+G D R+WD TG
Sbjct: 680 SWICQLPKVNEKWGAELQTLEGHSNSVW--------AVLASGSDDETVRLWDPATGSLQQ 731
Query: 359 FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
LEGH V SV FSPDG LA+GS D V++WD
Sbjct: 732 TLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWD 765
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 220 (82.5 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 66/230 (28%), Positives = 108/230 (46%)
Query: 169 TASWSGLCKLWTVPECELVQTFRGHD--CNVGAIEFHPLPSEGAV--CSLASCAQDGSVK 224
+AS K+W + L +T +GH N A+ GA + AQD
Sbjct: 263 SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGS 322
Query: 225 LWSLDKDTPLA--NL-EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPF 281
L L K+ L+ NL G P R+ S F W + PLA + GH+
Sbjct: 323 LQEL-KERALSRYNLVRGQGPERL----VSGSDDFT-LFLWSPA-EDKKPLARMTGHQAL 375
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
++++ F P R + + +D S +LWD G+ + GH VY +++ D ++ +G
Sbjct: 376 -INQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGS 434
Query: 342 LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
D+ +VWD++ + L GH V++VD+SPDG +A+G +D ++IW
Sbjct: 435 SDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 192 (72.6 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 61/245 (24%), Positives = 113/245 (46%)
Query: 161 SPDSQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+P+ ++VA++S G ++W T CE +T GH +V + + +G L S +
Sbjct: 214 NPECRYVASSSKDGSVRVWDTTAGRCE--RTLTGHAQSVTCLRWG---GDGL---LYSAS 265
Query: 219 QDGSVKLWSLDKDTPLANLEGH----EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN 274
QD ++K+W L+GH +S +G F ++ L L
Sbjct: 266 QDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQE 325
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL-HQEGHGKPVYCMSFQGD 333
L+ R + ++ R + D + LW + ++ L GH + + F D
Sbjct: 326 LKERALSRYNLVRGQGPERLVSGSD-DFTLFLWSPAEDKKPLARMTGHQALINQVVFSPD 384
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
V+A+ D ++WD RTG+ + L GH+ +V+ + +S D L +GS D+ +K+WD+
Sbjct: 385 SRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV 444
Query: 394 RKRRL 398
+ ++L
Sbjct: 445 KAQKL 449
Score = 172 (65.6 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 68/228 (29%), Positives = 100/228 (43%)
Query: 181 VPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
V C + GH V ++ F P G LAS + D +V+ W L +TP +GH
Sbjct: 104 VTRC--TSSLEGHSEAVISVAFSPT---GKY--LASGSGDTTVRFWDLSTETPHFTCQGH 156
Query: 241 EPFRVSRIKFHPSGRFLGTCC-------WDHSWRLDTPLANLEGHEPF--RVSRIKFH-- 289
+ +S I + P G+ L + C WD S A L GH + +S H
Sbjct: 157 RHWVLS-ISWSPDGKKLASGCKNGQILLWDPSTGKQVGRA-LTGHSKWITALSWEPLHAN 214
Query: 290 PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
P R++ + D S R+WD G+ GH + V C+ + GDG ++ + D +VW
Sbjct: 215 PECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVW 273
Query: 350 DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA---VKIWDLR 394
G L+GH V ++ S D Y L TG+ + A V DLR
Sbjct: 274 RAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQDLR 320
Score = 136 (52.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 64/252 (25%), Positives = 109/252 (43%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELV-QTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
S+SPD + +A+ +G LW + V + GH + A+ + PL + +AS
Sbjct: 164 SWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASS 223
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRL-DTPLA 273
++DGSV++W L GH V+ +++ G L + D + WR D L
Sbjct: 224 SKDGSVRVWDTTAGRCERTLTGHAQ-SVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLC 281
Query: 274 N-LEGHEPFRVSRIKFHPSGRFLGTCCWDH---SWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L+GH + V+ + + L T ++ S DL + L + + Y +
Sbjct: 282 RTLQGHGHW-VNTMALS-TDYALRTGAFEPAEASVNAQDLRGSLQELKERALSR--YNL- 336
Query: 330 FQGDGSVVATGGLDAFGR-VWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
+G G G D F +W + + + GH + V FSPD +A+ S D +
Sbjct: 337 VRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKS 396
Query: 388 VKIWDLRKRRLL 399
+K+WD R + L
Sbjct: 397 IKLWDGRTGKYL 408
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 199 (75.1 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D+Q + T+S C LW + + F GH +V ++ P +G
Sbjct: 41 GHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP---DG 96
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+C D S+KLW + GHE ++ + F P+G T D + RL
Sbjct: 97 RTFVSGAC--DASIKLWDVRDSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLF 153
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD +G GH
Sbjct: 154 DLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDN 213
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F ++W+
Sbjct: 214 RVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 180 (68.4 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 46/143 (32%), Positives = 71/143 (49%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH + +S +F + + T D + LWD+ GQ+ + GH V +S DG
Sbjct: 39 LPGHTGY-LSCCRFLDDNQII-TSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDG 96
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+G DA ++WD+R C GH + +V F P+GY TGS+D +++DLR
Sbjct: 97 RTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLR 156
Query: 395 K-RRLLKWCTQLLPNSI-GVTSL 415
+ LL + N I G+TS+
Sbjct: 157 ADQELLMYSHD---NIICGITSV 176
Score = 168 (64.2 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 65/249 (26%), Positives = 103/249 (41%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P VA +C ++++ E V+ R GH + F L + S
Sbjct: 3 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITS 60
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS---WRLD 269
+ D + LW ++ GH V + P GR F+ C D S W +
Sbjct: 61 ----SGDTTCALWDIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVR 114
Query: 270 TPLANLE--GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GHE ++ + F P+G T D + RL+DL QE+L H + C
Sbjct: 115 DSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDN-IIC 171
Query: 328 ----MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
++F G ++ G D +WD G L GH V + + DG +ATGS
Sbjct: 172 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGS 231
Query: 384 EDNAVKIWD 392
D+ +KIW+
Sbjct: 232 WDSFLKIWN 240
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 211 VCSLASC-AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+CS+ S ++G+V++ ++ P GH + +S +F + + T D + W
Sbjct: 20 ICSIYSLKTREGNVRV---SRELP-----GHTGY-LSCCRFLDDNQII-TSSGDTTCALW 69
Query: 267 RLDT--PLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
++T GH V + P GR F+ C D S +LWD+ GH
Sbjct: 70 DIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVRDSMCRQTFIGHES 127
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR-CIMFLEGHLK-SVFSVDFSPDGYHLAT 381
+ ++F +G TG DA R++DLR + +M+ ++ + SV FS G L
Sbjct: 128 DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLA 187
Query: 382 GSEDNAVKIWDLRK 395
G +D IWD K
Sbjct: 188 GYDDFNCNIWDAMK 201
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 228 (85.3 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 68/249 (27%), Positives = 111/249 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTF-RGHDCNVGAIEFHPLPSE 208
G TR I+ +FSP +A+ S L K+W V + T + H+ + I F+P +E
Sbjct: 1826 GHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPT-NE 1884
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
C L SC+ D S K+WS + + EG + + P G+++ T D S +
Sbjct: 1885 ---CELISCSDDYSTKVWSRFTTSTTLSTEGSTN-TIKHCVYSPDGKYIATVSRDCSIAV 1940
Query: 269 -----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
L L+GH + V+ F P + L + WD + R+W++ +E+L +GH
Sbjct: 1941 YLCSSKKLLFRLKGHTDW-VNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSS 1999
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY-HLATG 382
+ F D + + D +VWD + G I L H + V S D + +
Sbjct: 2000 SIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLR-HQTRISDVVSSSDASGRIFSS 2058
Query: 383 SEDNAVKIW 391
S+D +K W
Sbjct: 2059 SDDGIIKSW 2067
Score = 204 (76.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 69/282 (24%), Positives = 122/282 (43%)
Query: 129 TARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVP-ECELV 187
T +N L + S + ++ +++CS S D ++ T S K+W+ +L
Sbjct: 1717 TMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLT 1776
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT---PLANLEGHEPFR 244
DC + F P LA A D +V+L+ + +T +A L GH
Sbjct: 1777 NFLIPGDCWANCLAFSPTQP-----LLAVGATDCTVRLFDVSSNTIYREVAKLHGHTR-A 1830
Query: 245 VSRIKFHPSGRFLGTCCWD---HSWRLDTPLAN--LEGHEPFRVSRIKFHPSGRF-LGTC 298
++ I F PSG + + D W + T A +E ++ I F+P+ L +C
Sbjct: 1831 ITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELISC 1890
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPV-YCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI 357
D+S ++W L EG + +C+ + DG +AT D V+ + + +
Sbjct: 1891 SDDYSTKVWSRFTTSTTLSTEGSTNTIKHCV-YSPDGKYIATVSRDCSIAVYLCSSKKLL 1949
Query: 358 MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
L+GH V FSPD L +G D +++W+++ ++ L
Sbjct: 1950 FRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKEL 1991
Score = 184 (69.8 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 60/243 (24%), Positives = 111/243 (45%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECEL---VQTFRGHDCNVGAIEFHPLPSEGAVCSLA 215
+FSP +A + +L+ V + V GH + +I F P G + +A
Sbjct: 1790 AFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSP---SGNL--IA 1844
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF-LGTCCWDHS---WRLDTP 271
S ++D +K+W++ +E ++ I F+P+ L +C D+S W T
Sbjct: 1845 STSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTT 1904
Query: 272 LANL--EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L EG + + P G+++ T D S ++ + + + +GH V +
Sbjct: 1905 STTLSTEGSTN-TIKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCT 1963
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
F D + +GG D RVW+++T + ++ L+GH S+ F+ D ++ + S D +VK
Sbjct: 1964 FSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVK 2023
Query: 390 IWD 392
+WD
Sbjct: 2024 VWD 2026
Score = 182 (69.1 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 66/278 (23%), Positives = 112/278 (40%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
VG + IS SFS D + +A++SW +W + + F+ H V EF P +
Sbjct: 1561 VGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANN 1620
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS--- 265
L SCA D S+ +++ N V+ + P G + + WD +
Sbjct: 1621 ----LLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKI 1676
Query: 266 WR-LDTPLANLEGH------EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
W DT + H + KF + + + + L+D+N + +
Sbjct: 1677 WNPFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVM 1736
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM-FLEGHLKSVFSVDFSPDGY 377
H K V S DG+ + TG DA +VW G + FL + FSP
Sbjct: 1737 GNHSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQP 1796
Query: 378 HLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
LA G+ D V+++D+ + + +L ++ +TS+
Sbjct: 1797 LLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSI 1834
Score = 160 (61.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 56/254 (22%), Positives = 113/254 (44%)
Query: 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGH--DCNV--GAIEFHPLPS 207
++P++ C +SPD +A++SW G K+W P + + H D ++ G+I+ +
Sbjct: 1650 SKPVNSCCWSPDGTLIASSSWDGTIKIWN-PFDTIAKDRLKHVIDASLSYGSIKSCKFSA 1708
Query: 208 EGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-- 265
+ + V L+ ++ L ++ G+ V+ G ++ T D +
Sbjct: 1709 NSK--QILATTMKNDVLLFDVNSQK-LISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAK 1765
Query: 266 -WR--LDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG---QEVLHQE 319
W L T L N + + F P+ L D + RL+D++ +EV
Sbjct: 1766 VWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLH 1825
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE-GHLKSVFSVDFSPDGY- 377
GH + + ++F G+++A+ D +VW+++T + +E H + + F+P
Sbjct: 1826 GHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNEC 1885
Query: 378 HLATGSEDNAVKIW 391
L + S+D + K+W
Sbjct: 1886 ELISCSDDYSTKVW 1899
Score = 149 (57.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 57/249 (22%), Positives = 101/249 (40%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
C +S D +A+A + ++ + T GH + F +G +LAS
Sbjct: 1528 CCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFS---DDGK--TLASS 1582
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRL-DTPLANL 275
+ D +V +W L + + H V+ +F P+ L +C WD S + +T N+
Sbjct: 1583 SWDNTVIVWDLIVGNQIHQFKDHSR-AVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNI 1641
Query: 276 EGHEPFRVSRIK------FHPSGRFLGTCCWDHSWRLW---DLNQGQEVLH----QEGHG 322
FR + K + P G + + WD + ++W D + H +G
Sbjct: 1642 --FRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYG 1699
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
C ++AT + ++D+ + + I + H KSV S DG ++ TG
Sbjct: 1700 SIKSCKFSANSKQILATTMKNDV-LLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTG 1758
Query: 383 SEDNAVKIW 391
S+D K+W
Sbjct: 1759 SDDATAKVW 1767
Score = 128 (50.1 bits), Expect = 0.00039, P = 0.00039
Identities = 53/240 (22%), Positives = 99/240 (41%)
Query: 145 YCSQVGDTRPISYCSFSPDSQ-HVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203
Y + PI+ SF+P ++ + + S K+W+ + G + +
Sbjct: 1864 YTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYS 1923
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
P +G +A+ ++D S+ ++ L L+GH + V+ F P + L + WD
Sbjct: 1924 P---DGKY--IATVSRDCSIAVYLCSSKKLLFRLKGHTDW-VNFCTFSPDSKKLVSGGWD 1977
Query: 264 HS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL-- 316
+ W + T L L+GH + + F +++ + +D S ++WD G E+
Sbjct: 1978 FNLRVWNIKTQKELLCLKGHSS-SIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSL 2036
Query: 317 -HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPD 375
HQ V S G + ++ D + W G C+ L GH + V F+P+
Sbjct: 2037 RHQTRISDVV--SSSDASGRIFSSSD-DGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPN 2093
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 214 (80.4 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 64/247 (25%), Positives = 114/247 (46%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTV-PECELVQTFRGHDCNVGAI-EFHPLPSEGAVCSLA 215
C F P+ +A+A + L LW+V +C+ T +GH GA+ E H ++G++ L
Sbjct: 73 CKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHS---GAVMELH-YNTDGSM--LF 126
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPL 272
S + D +V +W + + L+GH F S + + T D + W +
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
A ++V + F+ + + + D+ ++WDL Q + GH V +S
Sbjct: 187 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 333 DGSVVATGGLDAFGRVWDLRT----GRCIMFLEGHL----KSVFSVDFSPDGYHLATGSE 384
+GS + + +D RVWD+R RC+ +G++ K++ +SPDG +A GS
Sbjct: 247 EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 306
Query: 385 DNAVKIW 391
D+ + W
Sbjct: 307 DSFLYPW 313
Score = 208 (78.3 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 62/239 (25%), Positives = 108/239 (45%)
Query: 182 PECELVQT----FRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP-LAN 236
P C +Q GH+ V +FHP G+ +LAS D + LWS+ D A
Sbjct: 51 PRCSSLQAPIMLLSGHEGEVYCCKFHP---NGS--TLASAGFDRLILLWSVYGDCDNYAT 105
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L+GH V + ++ G L + D + W +T + L+GH F S
Sbjct: 106 LKGHSG-AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
+ + T D + +LWD+ + + + + V ++F + +GG+D +VWDL
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
R + + GH SV + S +G +L + + DN V++WD+R + C ++ ++
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 197 (74.4 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D+Q + T+S C LW + + TF GH +V ++ P +
Sbjct: 41 GHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP---DT 96
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ +C D S KLW + + GHE ++ I F P+G T D + RL
Sbjct: 97 RLFVSGAC--DASAKLWDVREGMCRQTFTGHES-DINAICFFPNGNAFATGSDDATCRLF 153
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD + GH
Sbjct: 154 DLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN 213
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F ++W+
Sbjct: 214 RVSCLGVTDDGMAVATGSWDSFLKIWN 240
Score = 174 (66.3 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 45/142 (31%), Positives = 70/142 (49%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH + +S +F + + T D + LWD+ GQ+ GH V +S D
Sbjct: 39 LAGHTGY-LSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDT 96
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ +G DA ++WD+R G C GH + ++ F P+G ATGS+D +++DLR
Sbjct: 97 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 156
Query: 395 KRRLLKWCTQLLPNSI-GVTSL 415
+ L T N I G+TS+
Sbjct: 157 ADQELM--TYSHDNIICGITSV 176
Score = 163 (62.4 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 68/250 (27%), Positives = 105/250 (42%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P +VA +C ++ + E V+ R GH + F L V S
Sbjct: 3 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTS 60
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS---WRLD 269
+ D + LW ++ GH V + P R F+ C D S W +
Sbjct: 61 ----SGDTTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGAC-DASAKLWDVR 114
Query: 270 TPLAN--LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GHE ++ I F P+G T D + RL+DL QE++ H + C
Sbjct: 115 EGMCRQTFTGHES-DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDN-IIC 171
Query: 328 ----MSFQGDGSVVATGGLDAFGRVWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
+SF G ++ G D VWD L+ R + L GH V + + DG +ATG
Sbjct: 172 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV-LAGHDNRVSCLGVTDDGMAVATG 230
Query: 383 SEDNAVKIWD 392
S D+ +KIW+
Sbjct: 231 SWDSFLKIWN 240
Score = 131 (51.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 43/141 (30%), Positives = 61/141 (43%)
Query: 259 TCC-WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVL 316
TC WD T GH V + P R F+ C D S +LWD+ +G
Sbjct: 65 TCALWDIETGQQT--TTFTGHTG-DVMSLSLAPDTRLFVSGAC-DASAKLWDVREGMCRQ 120
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL--EGHLKSVFSVDFSP 374
GH + + F +G+ ATG DA R++DLR + +M + + + SV FS
Sbjct: 121 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 180
Query: 375 DGYHLATGSEDNAVKIWDLRK 395
G L G +D +WD K
Sbjct: 181 SGRLLLAGYDDFNCNVWDALK 201
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 220 (82.5 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 68/258 (26%), Positives = 117/258 (45%)
Query: 157 YC-SFSPDSQHVATASWSGLCKLW--TVP-ECELVQTFRGHDCNVGAIEFHPLPSEGAVC 212
YC +SPD + +A+ +LW TV +C ++ + H C GAI ++G
Sbjct: 93 YCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSII---KAH-C--GAIRSMSFSADGGY- 145
Query: 213 SLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGT-------CCWDHS 265
L S + D ++KLW L + + GH+ + S + P R + + WD +
Sbjct: 146 -LLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGV-ISPDMRLVASGSDDKTVMLWDLN 203
Query: 266 WR--------LD--TPLANLEGHEPFR--VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ 313
++ LD ++ + + VS++ FHP G L + +DH ++ D+ +
Sbjct: 204 FQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNK 263
Query: 314 EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFS 373
+ H H V +S G +A+ G D+ ++WDLR GR I L + K + +V F+
Sbjct: 264 LIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFN 323
Query: 374 PDGYHLATGSEDNAVKIW 391
G + ATG N +W
Sbjct: 324 QSGDYFATGGSQNLCMVW 341
Score = 173 (66.0 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 61/239 (25%), Positives = 104/239 (43%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP---LPSEGA---VC 212
SFS D ++ ++S KLW + + + + +F GH V + P L + G+
Sbjct: 138 SFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTV 197
Query: 213 SLASCAQDGSVKLWS-LDKDTPLANLEGHEPFR--VSRIKFHPSGRFLGTCCWDHSWRLD 269
L V +S LD + ++ + + VS++ FHP G L + +DH ++
Sbjct: 198 MLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKIT 257
Query: 270 TPLAN-LEGH---EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
+N L H +V+ I HP+G FL + D ++WDL QG+++ + K +
Sbjct: 258 DIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDI 317
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVF---SVDFSPDGYHLAT 381
+ F G ATGG VW + I +E +S V++S G + T
Sbjct: 318 TTVQFNQSGDYFATGGSQNLCMVWKTNFDQNIQNIEQVQRSTVRQNDVEYSSGGLYAQT 376
Score = 164 (62.8 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 34/126 (26%), Positives = 60/126 (47%)
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
+ GHE ++ F P R + +C D +W+ Q GH VYC+ + D
Sbjct: 42 SFRGHEDI-ITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPD 100
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G +A+ G D R+W ++ H ++ S+ FS DG +L + S+D +K+W L
Sbjct: 101 GETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRL 160
Query: 394 RKRRLL 399
+ ++ +
Sbjct: 161 QDKKFM 166
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 39/149 (26%), Positives = 64/149 (42%)
Query: 266 WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN------------- 310
WRL + + GH+ + S + P R + + D + LWDLN
Sbjct: 158 WRLQDKKFMCSFAGHKNWVRSGV-ISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDD 216
Query: 311 --QGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVF 368
+ ++ H V + F DG+ + + D ++ D+R+ + I H V
Sbjct: 217 NVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVN 276
Query: 369 SVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
S+ P GY LA+ D+ +KIWDLR+ R
Sbjct: 277 SISIHPTGYFLASAGSDSKIKIWDLRQGR 305
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 175 (66.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W +T L+GH V I F S
Sbjct: 39 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHS 96
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 97 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++TG C+ GH + V V + DG +A+ S D V++W
Sbjct: 156 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 196
Score = 174 (66.3 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 58/217 (26%), Positives = 97/217 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 27 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERT 80
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPS 291
L+GH V I F SG+ L +C D + +L D + + GH+ VS + P+
Sbjct: 81 LKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPN 138
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + + D + ++W++ G V GH + V + DG+++A+ D RVW +
Sbjct: 139 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 198
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHL----ATGSE 384
T C L H V + ++P+ + ATGSE
Sbjct: 199 ATKECKAELREHEHVVECISWAPESSYSSISEATGSE 235
Score = 173 (66.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V+R+ FHP + + D + ++WD G +GH V +SF G
Sbjct: 39 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 97
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+ D ++WD + CI + GH +V SV P+G H+ + S D +K+W+++
Sbjct: 98 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 157
Query: 395 KRRLLK-------WCTQLLPNSIG 411
+K W + PN G
Sbjct: 158 TGYCVKTFTGHREWVRMVRPNQDG 181
Score = 147 (56.8 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G + + D RVWD
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 143 (55.4 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 41 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD---HSG 97
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 98 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSASRDKTIKMW 154
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G + +C D + R+W + + H
Sbjct: 155 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 213
Query: 325 VYCMSFQGDGS 335
V C+S+ + S
Sbjct: 214 VECISWAPESS 224
Score = 113 (44.8 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 37/150 (24%), Positives = 63/150 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + SF + +A+ S KLW E ++T GHD NV ++ P G
Sbjct: 83 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG 139
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S ++D ++K+W + + GH + V ++ + G + +C D + W
Sbjct: 140 D--HIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW 196
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRF 294
+ T A L HE V I + P +
Sbjct: 197 VVATKECKAELREHEHV-VECISWAPESSY 225
Score = 113 (44.8 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F G + + ++D +++WD
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 303 KNKRCMK 309
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W +T L+GH V I F S
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHS 161
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 162 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++TG C+ GH + V V + DG +A+ S D V++W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 58/217 (26%), Positives = 97/217 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERT 145
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPS 291
L+GH V I F SG+ L +C D + +L D + + GH+ VS + P+
Sbjct: 146 LKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPN 203
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + + D + ++W++ G V GH + V + DG+++A+ D RVW +
Sbjct: 204 GDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHL----ATGSE 384
T C L H V + ++P+ + ATGSE
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 170 (64.9 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 40/144 (27%), Positives = 68/144 (47%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V+R+ FHP + + D + ++WD G +GH V +SF G
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+ D ++WD + CI + GH +V SV P+G H+ + + D +K+W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQ 222
Query: 395 KRRLLK-------WCTQLLPNSIG 411
+K W + PN G
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDG 246
Score = 147 (56.8 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G + + D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 144 (55.7 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD---HSG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 163 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSAARDKTIKMW 219
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G + +C D + R+W + + H
Sbjct: 220 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 325 VYCMSFQGDGS 335
V C+S+ + S
Sbjct: 279 VECISWAPESS 289
Score = 116 (45.9 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 38/150 (25%), Positives = 63/150 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + SF + +A+ S KLW E ++T GHD NV ++ P G
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S A+D ++K+W + + GH + V ++ + G + +C D + W
Sbjct: 205 D--HIVSAARDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRF 294
+ T A L HE V I + P +
Sbjct: 262 VVATKECKAELREHEHV-VECISWAPESSY 290
Score = 113 (44.8 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F G + + ++D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 368 KNKRCMK 374
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 222 (83.2 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 69/272 (25%), Positives = 118/272 (43%)
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ 219
F P + T ++G ++W+ LV++ + + V A +F + V S
Sbjct: 21 FHPTEPWILTTLYNGKIEIWSYATNSLVKSIQVTELPVRAGKFIARKNWIVVGS-----D 75
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC---------WDHSWRLDT 270
D +++++ + + E H P + I HPS ++ T WDH+W+L+
Sbjct: 76 DFQIRVYNYNTGEKVTQFEAH-PDYIRSIAVHPSKPYILTSSDDLTIKLWNWDHNWKLEQ 134
Query: 271 PLANLEGHEPFRVSRIKFHPSG-RFLGTCCWDHSWRLWDLNQGQEVLHQEGH-GKPVYCM 328
EGH+ + +S + F+P + C D + ++W L Q H K V +
Sbjct: 135 ---TFEGHQHYVMS-VNFNPKDPNTFASACLDRTVKIWSLGSSQPNFTLIAHEAKGVNYV 190
Query: 329 SF--QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN 386
+ Q D + T D +VWD +T C+ LEGHL +V F P+ + +GSED
Sbjct: 191 DYYPQADKPYLITSSDDKTIKVWDYQTKSCVATLEGHLSNVSFAIFHPELPIIVSGSEDG 250
Query: 387 AVKIWDLRKRRLLK---------WCTQLLPNS 409
++ W+ +L K WC +LP S
Sbjct: 251 TIRFWNSNTFKLEKSINYSLERAWCIGILPKS 282
Score = 152 (58.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 54/222 (24%), Positives = 103/222 (46%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PF 243
++V+ F V I+FHP +E + + +G +++WS ++ + +++ E P
Sbjct: 4 DVVKQFSTRSDRVKGIDFHP--TEPWILTTL---YNGKIEIWSYATNSLVKSIQVTELPV 58
Query: 244 RVSRIKFHPSGRFLGTCCWD---HSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW 300
R + + +G+ + +++ + E H P + I HPS ++ T
Sbjct: 59 RAGKFIARKNWIVVGSDDFQIRVYNYNTGEKVTQFEAH-PDYIRSIAVHPSKPYILTSSD 117
Query: 301 DHSWRLWDLNQGQEVLHQ--EGHGKPVYCMSFQG-DGSVVATGGLDAFGRVWDLRTGRCI 357
D + +LW+ + + L Q EGH V ++F D + A+ LD ++W L + +
Sbjct: 118 DLTIKLWNWDHNWK-LEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVKIWSLGSSQPN 176
Query: 358 MFLEGH-LKSVFSVDFSP--DGYHLATGSEDNAVKIWDLRKR 396
L H K V VD+ P D +L T S+D +K+WD + +
Sbjct: 177 FTLIAHEAKGVNYVDYYPQADKPYLITSSDDKTIKVWDYQTK 218
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 61/266 (22%), Positives = 108/266 (40%)
Query: 134 ELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGH 193
E+ + T+ + QV + P+ F + S +++ E V F H
Sbjct: 38 EIWSYATNSLVKSIQVTEL-PVRAGKFIARKNWIVVGSDDFQIRVYNYNTGEKVTQFEAH 96
Query: 194 DCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN-LEGHEPFRVSRIKFHP 252
+ +I HP S+ + L S + D ++KLW+ D + L EGH+ + +S + F+P
Sbjct: 97 PDYIRSIAVHP--SKPYI--LTS-SDDLTIKLWNWDHNWKLEQTFEGHQHYVMS-VNFNP 150
Query: 253 SG-RFLGTCCWDHS---WRLDTPLAN--LEGHEPFRVSRIKFHPSGR--FLGTCCWDHSW 304
+ C D + W L + N L HE V+ + ++P +L T D +
Sbjct: 151 KDPNTFASACLDRTVKIWSLGSSQPNFTLIAHEAKGVNYVDYYPQADKPYLITSSDDKTI 210
Query: 305 RLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
++WD V EGH V F + ++ +G D R W+ T + + L
Sbjct: 211 KVWDYQTKSCVATLEGHLSNVSFAIFHPELPIIVSGSEDGTIRFWNSNTFKLEKSINYSL 270
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKI 390
+ + + P +A G + V I
Sbjct: 271 ERAWCIGILPKSNVIAAGFDSGFVII 296
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 217 (81.4 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 40/122 (32%), Positives = 71/122 (58%)
Query: 270 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
T ++ L GH+ ++ + F P GR+ + +D S +LWD G+ + + GH VY +
Sbjct: 385 TSISRLTGHQQL-INLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVC 443
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
+ D + +G D+ ++WD++T + L GH V++VD+SPDG +A+GS+D ++
Sbjct: 444 WSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLR 503
Query: 390 IW 391
IW
Sbjct: 504 IW 505
Score = 201 (75.8 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 68/260 (26%), Positives = 123/260 (47%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPEC--ELVQTFRGHDCNVGAIEFHPLPS 207
G T + ++SPDS+ +ATA G ++W P+ +L T +GH + + + P
Sbjct: 180 GHTNWVLQVAWSPDSKKIATAGMEGDIRIWC-PQTGKQLGSTLKGHTKFITGLSWEPFHL 238
Query: 208 EGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR 267
LAS ++D ++++W + L +L GH V+ +K+ G + + D + R
Sbjct: 239 NPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHT-MSVTCLKWGGEG-LIYSGSQDRTVR 296
Query: 268 L----DTPLAN-LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWD-LNQGQEVLHQEGH 321
+ D L L+GH + V+ + + + L T +DH+ + +D L + Q V + +
Sbjct: 297 VFNTTDGRLVRVLDGHAHW-VNTLALN-TDYVLRTGSYDHTGKEYDTLEEAQRVALERYN 354
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRV-WDLR-TGRCIMFLEGHLKSVFSVDFSPDGYHL 379
+ + G + G D F + W+ T I L GH + + V FSPDG +
Sbjct: 355 D-----VKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYF 409
Query: 380 ATGSEDNAVKIWDLRKRRLL 399
A+ S D ++K+WD + + L
Sbjct: 410 ASASFDKSIKLWDGQSGKFL 429
Score = 190 (71.9 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 55/242 (22%), Positives = 120/242 (49%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
+P +A++S ++W C+ + + GH +V +++ EG + S +QD
Sbjct: 239 NPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWG---GEGLIYS---GSQD 292
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEP 280
+V++++ + L+GH + V+ + + + L T +DH+ + L +
Sbjct: 293 RTVRVFNTTDGRLVRVLDGHAHW-VNTLALN-TDYVLRTGSYDHTGKEYDTLEEAQRVAL 350
Query: 281 FRVSRIKFHPSG-RFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVA 338
R + +K G L + D + +W+ + + + + GH + + +SF DG A
Sbjct: 351 ERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFA 410
Query: 339 TGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ D ++WD ++G+ + GH+ +V+ V +S D +L +GS+D+ +KIWD++ +++
Sbjct: 411 SASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKM 470
Query: 399 LK 400
K
Sbjct: 471 EK 472
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 63/257 (24%), Positives = 109/257 (42%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T + C+FSPD + + ++W + T +GH V + + P
Sbjct: 135 SMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSP-D 193
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLAN-LEGHEPF--RVSRIKFH--PSGRFLGTCC 261
S+ +A+ +G +++W L + L+GH F +S FH P L +
Sbjct: 194 SK----KIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSS 249
Query: 262 WDHSWRL-DTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL 316
D + R+ DT L +L GH V+ +K+ G + + D + R+++ G+ V
Sbjct: 250 KDSTIRIWDTESCKNLMSLSGHT-MSVTCLKWGGEG-LIYSGSQDRTVRVFNTTDGRLVR 307
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG 376
+GH V ++ D V+ TG D G+ +D + LE + V G
Sbjct: 308 VLDGHAHWVNTLALNTD-YVLRTGSYDHTGKEYDTLEEAQRVALERYN----DVKAKSKG 362
Query: 377 YH-LATGSEDNAVKIWD 392
L +GS+D V +W+
Sbjct: 363 MEILISGSDDFTVIMWN 379
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 34/128 (26%), Positives = 63/128 (49%)
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
+++ GH V F P G+ + D + R+WD+ +GH V +++
Sbjct: 134 SSMSGHTE-AVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSP 192
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCI-MFLEGHLKSVFSVDFSPDGYHL-------ATGSE 384
D +AT G++ R+W +TG+ + L+GH K + + + P +HL A+ S+
Sbjct: 193 DSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEP--FHLNPKCVRLASSSK 250
Query: 385 DNAVKIWD 392
D+ ++IWD
Sbjct: 251 DSTIRIWD 258
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 60/220 (27%), Positives = 95/220 (43%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W + L+GH V I F +
Sbjct: 104 LSGHRS-PVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTD-SVQDISFDQT 161
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 162 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
+ TG C+ GH + V V + DG LA+ S D V++W + + C L
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKE----CKAELREHE 276
Query: 411 GVTSLLTDLYIDVLESLNPGIGNIISSALKEQVEPIPLLL 450
V ++ ES +P I S K+ +P P LL
Sbjct: 277 HVVECISW----APESAHPTISEATGSENKKSGKPGPFLL 312
Score = 145 (56.1 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G V + D R+WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 140 (54.3 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 45/186 (24%), Positives = 79/186 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFD---QTG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 163 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSASRDKTMKMW 219
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G L +C D + R+W + + H
Sbjct: 220 EVATGYCVKTFTGHREW-VRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 325 VYCMSF 330
V C+S+
Sbjct: 279 VECISW 284
Score = 126 (49.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 52/209 (24%), Positives = 89/209 (42%)
Query: 122 HIPEATRTARNQELQKHLTSLSIYCSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLW 179
HI A+R + ++ + T YC + G + + D +A+ S ++W
Sbjct: 206 HIVSASRD-KTMKMWEVATG---YCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Query: 180 TVPECELVQTFRGHDCNVGAIEF-----HPLPSEGAVCS----------LASCAQDGSVK 224
V E R H+ V I + HP SE L S ++D ++K
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIK 321
Query: 225 LWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHE 279
+W + L L GH+ + V + FHP GRF+ +C D + R+ D + L HE
Sbjct: 322 MWDISTGMCLMTLVGHDNW-VRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHE 380
Query: 280 PFRVSRIKFHPSGRFLGTCCWDHSWRLWD 308
F V+ + FH + ++ T D + ++W+
Sbjct: 381 HF-VTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 123 (48.4 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F P G + + ++D ++IWD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 368 KNKRCMK 374
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 28/89 (31%), Positives = 42/89 (47%)
Query: 266 WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
W + T L L GH+ + V + FHP GRF+ +C D + R+WD + + H
Sbjct: 323 WDISTGMCLMTLVGHDNW-VRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEH 381
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
V + F V TG +D +VW+ R
Sbjct: 382 FVTSLDFHKASPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 195 (73.7 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 51/170 (30%), Positives = 78/170 (45%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGH-EPFRVSRIKFHPSGRFLGTCCWD-HSWRLDTP 271
LA+ D V LWS++K + +L GH P R+ G+ W L+
Sbjct: 40 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 99
Query: 272 --LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
L L GH+ + + FHP G F+ + D + +LWD+ + V GH + V C+
Sbjct: 100 KILRTLMGHKA-NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 158
Query: 330 FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379
F DG +A+ D ++WDL G+ + GH V V+F P+ Y L
Sbjct: 159 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 208
Score = 188 (71.2 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 253 SGRFLGTC---CWDHSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
SGR L T C + W ++ P + +L GH V ++ + + S R+W
Sbjct: 36 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS-PVESVRLNTPEELIVAGSQSGSIRVW 94
Query: 308 DLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSV 367
DL + + GH + + F G VA+G D ++WD+R C+ GH ++V
Sbjct: 95 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAV 154
Query: 368 FSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
+ FSPDG LA+ ++D+ VK+WDL +++
Sbjct: 155 RCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 186
Score = 167 (63.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 41/151 (27%), Positives = 74/151 (49%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T P+ + + + S SG ++W + ++++T GH N+ +++FHP
Sbjct: 62 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPY- 120
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
G +AS +QD ++KLW + + + GH V ++F P G++L + DH+
Sbjct: 121 --GEF--VASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRFSPDGKWLASAADDHTV 175
Query: 266 --WRLDTP--LANLEGHE-PFRVSRIKFHPS 291
W L ++ GH P V ++FHP+
Sbjct: 176 KLWDLTAGKMMSEFPGHTGPVNV--VEFHPN 204
Score = 125 (49.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 47/178 (26%), Positives = 72/178 (40%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEEYSXXXXXXXXXXXXXHLHIPEATRTARNQELQKHL 139
++T + ++NL + +P C+ L+ PE A +Q +
Sbjct: 40 LATGGDDCRVNLWSINKPNCIMS------LTGHTSPVESVRLNTPEELIVAGSQSGSIRV 93
Query: 140 TSLS---IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN 196
L I + +G I F P + VA+ S KLW + V +RGH
Sbjct: 94 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA 153
Query: 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPS 253
V + F P +G LAS A D +VKLW L ++ GH P V ++FHP+
Sbjct: 154 VRCLRFSP---DGKW--LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNV--VEFHPN 204
Score = 118 (46.6 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 331 QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKI 390
+ G ++ATGG D +W + CIM L GH V SV + + GS+ ++++
Sbjct: 34 KASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRV 93
Query: 391 WDLRKRRLLK 400
WDL ++L+
Sbjct: 94 WDLEAAKILR 103
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 207 (77.9 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 55/228 (24%), Positives = 101/228 (44%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
++ SF D++ + T+S G K+W V + + ++ H+ V + HP ++G L
Sbjct: 78 VTSVSFQQDNRWMVTSSEDGTIKVWDVRSPSIPRNYK-HNAPVNEVVIHP--NQG---EL 131
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL------GTC-CWDHSWR 267
SC +DG++++W L ++ L + + + G L G C W+
Sbjct: 132 ISCDRDGNIRIWDLGENQCTHQLTPEDDTSLQSLSMASDGSMLAAANTKGNCYVWEMPNH 191
Query: 268 LDT----PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV-LHQEGHG 322
D P+ H + ++RI + L TC DH+ R+W ++ ++ +GH
Sbjct: 192 TDASHLKPVTKFRAHSTY-ITRILLSSDVKHLATCSADHTARVWSIDDDFKLETTLDGHQ 250
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV 370
+ V+ +F D + + T D + R+WDL T + GH K V
Sbjct: 251 RWVWDCAFSADSAYLVTASSDHYVRLWDLSTREIVRQYGGHHKGAVCV 298
Score = 151 (58.2 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 61/276 (22%), Positives = 115/276 (41%)
Query: 139 LTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECEL--VQTFRGHDCN 196
LT + Q D++ ++ + D + +ATA + +L+ + V +F GH N
Sbjct: 20 LTGVCSRTIQHSDSQ-VNRLEITNDKKLLATAGHQNV-RLYDIRTTNPNPVASFEGHRGN 77
Query: 197 VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF 256
V ++ F + V S ++DG++K+W + + N + + P V+ + HP+
Sbjct: 78 VTSVSFQQ-DNRWMVTS----SEDGTIKVWDVRSPSIPRNYKHNAP--VNEVVIHPNQGE 130
Query: 257 LGTCCWDHS---WRLDTPLAN--LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ 311
L +C D + W L L + + + G L + +W++
Sbjct: 131 LISCDRDGNIRIWDLGENQCTHQLTPEDDTSLQSLSMASDGSMLAAANTKGNCYVWEMPN 190
Query: 312 GQEVLHQE------GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG-RCIMFLEGHL 364
+ H + H + + D +AT D RVW + + L+GH
Sbjct: 191 HTDASHLKPVTKFRAHSTYITRILLSSDVKHLATCSADHTARVWSIDDDFKLETTLDGHQ 250
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ V+ FS D +L T S D+ V++WDL R +++
Sbjct: 251 RWVWDCAFSADSAYLVTASSDHYVRLWDLSTREIVR 286
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 44/187 (23%), Positives = 80/187 (42%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P++ P+ + + G ++W + E + D +++ + S+G++
Sbjct: 118 PVNEVVIHPNQGELISCDRDGNIRIWDLGENQCTHQLTPEDDT--SLQSLSMASDGSM-- 173
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFR-----VSRIKFHPSGRFLGTCCWDHS--- 265
LA+ G+ +W + T ++L+ FR ++RI + L TC DH+
Sbjct: 174 LAAANTKGNCYVWEMPNHTDASHLKPVTKFRAHSTYITRILLSSDVKHLATCSADHTARV 233
Query: 266 WRLDTPL---ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322
W +D L+GH+ + V F +L T DH RLWDL+ + V GH
Sbjct: 234 WSIDDDFKLETTLDGHQRW-VWDCAFSADSAYLVTASSDHYVRLWDLSTREIVRQYGGHH 292
Query: 323 KPVYCMS 329
K C++
Sbjct: 293 KGAVCVA 299
Score = 123 (48.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 300 WDHSWRLWDLNQG---QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+DH+ R W+ G + + H + V + D ++AT G R++D+RT
Sbjct: 10 YDHTIRFWEALTGVCSRTIQHSDSQ---VNRLEITNDKKLLATAGHQNV-RLYDIRTTNP 65
Query: 357 --IMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ EGH +V SV F D + T SED +K+WD+R
Sbjct: 66 NPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWDVR 105
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 209 (78.6 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 73/246 (29%), Positives = 109/246 (44%)
Query: 169 TASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ--DGSVKLW 226
T S KLW E +LV+T GH V A+ HP A S+ S + D
Sbjct: 35 TGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNAT 94
Query: 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH-SWRLDTPLA--NLEGHEPF-R 282
+ P + + G + I G WD SWRL + L+ + +P +
Sbjct: 95 IAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDK 154
Query: 283 VSRIKF------HPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQG-DG 334
S KF P+G+ L D + ++D+++ + +LHQ EGH PV + F D
Sbjct: 155 TSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSK-LLHQLEGHNMPVRSLVFSPVDP 213
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
V+ +G D + D + + GH V SVD SPDG +ATGS D V++WDL+
Sbjct: 214 RVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLK 273
Query: 395 KRRLLK 400
R ++
Sbjct: 274 MRAAIQ 279
Score = 123 (48.4 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 64/272 (23%), Positives = 107/272 (39%)
Query: 142 LSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIE 201
L + + G + ++ + P A++S +++ V + V ++
Sbjct: 50 LDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQ 109
Query: 202 FHPLPSEGAVCSLASCAQD-GSVKLWSLDKDTPLANLEGHEPF-RVSRIKF------HPS 253
F P + AV +S + W L + + +P + S KF P+
Sbjct: 110 FEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPN 169
Query: 254 GRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLW 307
G+ L D + + +D L LEGH V + F P R L + D +
Sbjct: 170 GKRLACGSMDGTICVFDVDRSKLLHQLEGHN-MPVRSLVFSPVDPRVLFSGSDDGHVNMH 228
Query: 308 DLNQGQEVL-HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKS 366
D +G+ +L GH V + DG +ATG D R+WDL+ I + H
Sbjct: 229 DA-EGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQ 287
Query: 367 VFSVDFSPDGY------HLATGSEDNAVKIWD 392
V+SV F P G LA+ S+D +V ++D
Sbjct: 288 VWSVAFRPPGGTGVRAGRLASVSDDKSVSLYD 319
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 172 (65.6 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V+R+ FHP + + D + ++WD G +GH V +SF G
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTG 162
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+ D ++WD + CI + GH +V SV P+G H+ + S D +K+W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 395 KRRLLK-------WCTQLLPNSIG 411
+K W + PN G
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDG 246
Score = 172 (65.6 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 47/161 (29%), Positives = 77/161 (47%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W +T L+GH V I F +
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHT 161
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 162 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++TG C+ GH + V V + DG +A+ S D V++W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 171 (65.3 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 57/217 (26%), Positives = 97/217 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERT 145
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPS 291
L+GH V I F +G+ L +C D + +L D + + GH+ VS + P+
Sbjct: 146 LKGHTD-SVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPN 203
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + + D + ++W++ G V GH + V + DG+++A+ D RVW +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHL----ATGSE 384
T C L H V + ++P+ + ATGSE
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSTISEATGSE 300
Score = 149 (57.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G + + D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 142 (55.0 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD---HTG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 163 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G + +C D + R+W + + H
Sbjct: 220 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 325 VYCMSFQGDGS 335
V C+S+ + S
Sbjct: 279 VECISWAPESS 289
Score = 115 (45.5 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F G + + ++D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 368 KNKRCMK 374
Score = 112 (44.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 37/150 (24%), Positives = 63/150 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + SF + +A+ S KLW E ++T GHD NV ++ P G
Sbjct: 148 GHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S ++D ++K+W + + GH + V ++ + G + +C D + W
Sbjct: 205 D--HIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRF 294
+ T A L HE V I + P +
Sbjct: 262 VVATKECKAELREHEHV-VECISWAPESSY 290
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 207 (77.9 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 62/228 (27%), Positives = 101/228 (44%)
Query: 160 FSPDSQHVATASWSGLCKLWTV--PECELVQTFRGHDCN--VGAIEFHPLPSEGAVCSLA 215
F + + + T S G K+W + P C+ R ++C+ V + HP +E L
Sbjct: 84 FQKEGKWMYTGSEDGTVKIWDLKAPGCQ-----RDYECSAPVNTVVLHPNQAE-----LI 133
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL------GTCCWDHSWRL- 268
S Q+GS+++W L +T L ++ + G + G C WRL
Sbjct: 134 SGDQNGSIRVWDLISNTCSRELVPDGEVGITSLTISSDGGLVVASNTKGKC---FVWRLG 190
Query: 269 --DT----PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322
DT PL +E H + + F P + L TC DH+ ++W+ + V GH
Sbjct: 191 EDDTSRFEPLQKIEAHNA-PILKTLFSPDTKLLATCSADHTVKIWNTKKFNVVQTLNGHQ 249
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV 370
+ V+ +F D + + TG D R+WDL G + GH+K+V +V
Sbjct: 250 RWVWDCAFSNDSAYLVTGSSDHLSRLWDLHQGDAVKTYSGHIKAVNAV 297
Score = 151 (58.2 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 59/225 (26%), Positives = 97/225 (43%)
Query: 189 TFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRI 248
+F GH NV + F EG S +DG+VK+W L + E P V+ +
Sbjct: 71 SFDGHKGNVTGVGFQ---KEGKWMYTGS--EDGTVKIWDLKAPGCQRDYECSAP--VNTV 123
Query: 249 KFHPSGRFLGTCCWDHSWRLDTPLANLEGHE--P---FRVSRIKFHPSGRFL------GT 297
HP+ L + + S R+ ++N E P ++ + G + G
Sbjct: 124 VLHPNQAELISGDQNGSIRVWDLISNTCSRELVPDGEVGITSLTISSDGGLVVASNTKGK 183
Query: 298 CCWDHSWRLWDLNQGQ-EVLHQ-EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
C WRL + + + E L + E H P+ F D ++AT D ++W+ +
Sbjct: 184 C---FVWRLGEDDTSRFEPLQKIEAHNAPILKTLFSPDTKLLATCSADHTVKIWNTKKFN 240
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
+ L GH + V+ FS D +L TGS D+ ++WDL + +K
Sbjct: 241 VVQTLNGHQRWVWDCAFSNDSAYLVTGSSDHLSRLWDLHQGDAVK 285
Score = 146 (56.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 64/242 (26%), Positives = 102/242 (42%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL-ASCAQDGSVKL 225
+ATAS+ K W P +R DC EFH E L + A + +L
Sbjct: 6 LATASYDHTIKFWDPPSGGC---YRSIDCG----EFHINRLEITHDKLYIAAAGNPQTRL 58
Query: 226 WSLD--KDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLANLEGHEP 280
+ ++ ++P + +GH+ V+ + F G+++ T D + W L P +
Sbjct: 59 FEVNTNNNSPAMSFDGHKG-NVTGVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRDYECS 117
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDL--NQGQEVLHQEGHGKPVYCMSFQGDGSVVA 338
V+ + HP+ L + + S R+WDL N L +G + ++ DG +V
Sbjct: 118 APVNTVVLHPNQAELISGDQNGSIRVWDLISNTCSRELVPDGE-VGITSLTISSDGGLVV 176
Query: 339 TGGLDAFGRVWDLR---TGRC--IMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
VW L T R + +E H + FSPD LAT S D+ VKIW+
Sbjct: 177 ASNTKGKCFVWRLGEDDTSRFEPLQKIEAHNAPILKTLFSPDTKLLATCSADHTVKIWNT 236
Query: 394 RK 395
+K
Sbjct: 237 KK 238
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 42/171 (24%), Positives = 82/171 (47%)
Query: 254 GRFLGTCCWDHSWRL-DTPLA----NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWD 308
G L T +DH+ + D P +++ E F ++R++ ++ + RL++
Sbjct: 3 GIILATASYDHTIKFWDPPSGGCYRSIDCGE-FHINRLEITHDKLYIAAA-GNPQTRLFE 60
Query: 309 LNQGQE--VLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKS 366
+N + +GH V + FQ +G + TG D ++WDL+ C E
Sbjct: 61 VNTNNNSPAMSFDGHKGNVTGVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRDYECSAP- 119
Query: 367 VFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT-QLLPNS-IGVTSL 415
V +V P+ L +G ++ ++++WDL + C+ +L+P+ +G+TSL
Sbjct: 120 VNTVVLHPNQAELISGDQNGSIRVWDL----ISNTCSRELVPDGEVGITSL 166
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 194 (73.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 53/155 (34%), Positives = 75/155 (48%)
Query: 250 FHPSGRFLGTCCWD----HSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 303
F P + L TCC D + W+ T LA++ GH V F GR + D S
Sbjct: 30 FSPDCQLLLTCC-DAGKLYLWKTSTAKLLASVSGHTG-PVKCCVFSSDGRLFASASHDCS 87
Query: 304 WRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
R W N + H H + V +SF DG + +GG D +W +++G + L+G
Sbjct: 88 VRTW-CNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSGALLEELKG 146
Query: 363 HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
H +V S FS D +ATGS D AV++W LR R+
Sbjct: 147 HNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQ 181
Score = 176 (67.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 53/190 (27%), Positives = 85/190 (44%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
++ C+FSPD Q + T +G LW +L+ + GH G ++ S+G +
Sbjct: 25 VNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGH---TGPVKCCVFSSDGRL--F 79
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP 271
AS + D SV+ W L H V + F P G++L + WD+ W + +
Sbjct: 80 ASASHDCSVRTWCNSSLKCTHTLTAHRR-SVETVSFSPDGQWLLSGGWDNRALIWSIQSG 138
Query: 272 --LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ-EVLHQEGHGKPVYCM 328
L L+GH S + F + + T WD + R+W L Q E + +GH V C+
Sbjct: 139 ALLEELKGHNAAVQSSV-FSSDSQSVATGSWDRAVRVWKLRDRQAEAVVLQGHLGNVACL 197
Query: 329 SFQGDGSVVA 338
F G +V+
Sbjct: 198 CFSVAGMLVS 207
Score = 173 (66.0 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 39/113 (34%), Positives = 53/113 (46%)
Query: 288 FHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGR 347
F P + L TCC LW + + + GH PV C F DG + A+ D R
Sbjct: 30 FSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTGPVKCCVFSSDGRLFASASHDCSVR 89
Query: 348 VWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
W + +C L H +SV +V FSPDG L +G DN IW ++ LL+
Sbjct: 90 TWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSGALLE 142
Score = 170 (64.9 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 57/197 (28%), Positives = 80/197 (40%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLA-SCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
++ F H V F P C L +C G + LW LA++ GH V
Sbjct: 15 IRYFSRHKAEVNCCAFSP------DCQLLLTCCDAGKLYLWKTSTAKLLASVSGHTG-PV 67
Query: 246 SRIKFHPSGRFLGTCCWDHSWRL--DTPLA---NLEGHEPFRVSRIKFHPSGRFLGTCCW 300
F GR + D S R ++ L L H V + F P G++L + W
Sbjct: 68 KCCVFSSDGRLFASASHDCSVRTWCNSSLKCTHTLTAHRR-SVETVSFSPDGQWLLSGGW 126
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC-IMF 359
D+ +W + G + +GH V F D VATG D RVW LR + +
Sbjct: 127 DNRALIWSIQSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQAEAVV 186
Query: 360 LEGHLKSVFSVDFSPDG 376
L+GHL +V + FS G
Sbjct: 187 LQGHLGNVACLCFSVAG 203
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 38/145 (26%), Positives = 58/145 (40%)
Query: 140 TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGA 199
++ + S G T P+ C FS D + A+AS + W + T H +V
Sbjct: 52 STAKLLASVSGHTGPVKCCVFSSDGRLFASASHDCSVRTWCNSSLKCTHTLTAHRRSVET 111
Query: 200 IEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGT 259
+ F P +G L S D +WS+ L L+GH S + F + + T
Sbjct: 112 VSFSP---DGQW--LLSGGWDNRALIWSIQSGALLEELKGHNAAVQSSV-FSSDSQSVAT 165
Query: 260 CCWDHS---WRLDTPLAN---LEGH 278
WD + W+L A L+GH
Sbjct: 166 GSWDRAVRVWKLRDRQAEAVVLQGH 190
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 213 (80.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 68/252 (26%), Positives = 109/252 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G +S F+P + ++S K+W ++T GH+ V I SE
Sbjct: 188 GHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITV----SED 243
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
C +ASC+ D ++K W++ K LA H V + F + +D
Sbjct: 244 GSC-IASCSNDQTIKTWNIVKGECLATYREHSHV-VECLAFSTANI------------ID 289
Query: 270 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCW------DHSWRLWDLNQGQEVLHQEGHGK 323
P + L P S++K P G +G C + D + ++W+L G+ + GH
Sbjct: 290 IPGSLLS--TPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDN 347
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL-EGHLKSVFSVDFSPDGYHLATG 382
V + F G + + G D RVWD+ GRCI + E H + +DF H+ATG
Sbjct: 348 WVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATG 407
Query: 383 SEDNAVKIWDLR 394
D+ +K+W L+
Sbjct: 408 GVDDVIKVWKLQ 419
Score = 201 (75.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 67/256 (26%), Positives = 105/256 (41%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + F +A+ S KLW + V+T GHD NV + F P +
Sbjct: 146 GHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQ- 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
L S ++D ++K+W + L GHE + V +I G + +C D + W
Sbjct: 205 ----LISSSRDKTIKVWEAATGYCIKTLVGHEDW-VRKITVSEDGSCIASCSNDQTIKTW 259
Query: 267 RL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ LA H V + F + D L +G+ + Q G
Sbjct: 260 NIVKGECLATYREHSHV-VECLAFSTANII------DIPGSLLSTPEGKSKVKQGPGGNL 312
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
V G +ATG D ++W+L TGRC+ GH V +V F P G L + +
Sbjct: 313 V------GQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGD 366
Query: 385 DNAVKIWDLRKRRLLK 400
D +++WD+ + R +K
Sbjct: 367 DKTIRVWDIAQGRCIK 382
Score = 192 (72.6 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 70/255 (27%), Positives = 112/255 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G I+ F P + +AS K+W E +T +GH V I+F G
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFD---KTG 160
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + L GH+ VS ++F PSG L + D + W
Sbjct: 161 NL--LASCSADLTIKLWDFQTYDCVKTLHGHD-HNVSCVRFTPSGDQLISSSRDKTIKVW 217
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
T + L GHE + V +I G + +C D + + W++ +G+ + H
Sbjct: 218 EAATGYCIKTLVGHEDW-VRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHV 276
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
V C++F +++ D G + G+ + +G ++ GY LATGS
Sbjct: 277 VECLAFS-TANII-----DIPGSLLSTPEGKSKV-KQGPGGNLVG----QCGY-LATGSR 324
Query: 385 DNAVKIWDLRKRRLL 399
D +KIW+L R L
Sbjct: 325 DKTIKIWELATGRCL 339
Score = 186 (70.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/168 (30%), Positives = 75/168 (44%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPL--ANLEGHEPFRVSRIKFHPS 291
L GH ++ +KFHPS + + D + W ++ L+GH V I F +
Sbjct: 102 LTGHRNC-INSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTN-AVQDIDFDKT 159
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G L +C D + +LWD V GH V C+ F G + + D +VW+
Sbjct: 160 GNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEA 219
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
TG CI L GH V + S DG +A+ S D +K W++ K L
Sbjct: 220 ATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECL 267
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 60/213 (28%), Positives = 92/213 (43%)
Query: 145 YCSQ--VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEF 202
YC + VG + + S D +A+ S K W + + E + T+R H V + F
Sbjct: 223 YCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAF 282
Query: 203 HPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW 262
SL S +G K+ K P NL G + + +G T
Sbjct: 283 STANIIDIPGSLLS-TPEGKSKV----KQGPGGNLVG-------QCGYLATGSRDKTI-- 328
Query: 263 DHSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH-QE 319
W L T LA GH+ + V ++FHP G+FL + D + R+WD+ QG+ + E
Sbjct: 329 -KIWELATGRCLATYIGHDNW-VRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINE 386
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
H + C+ F +ATGG+D +VW L+
Sbjct: 387 AHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W +T L+GH V I F S
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHS 161
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 162 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++TG C+ GH + V V + DG +A+ S D V++W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 58/217 (26%), Positives = 97/217 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERT 145
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPS 291
L+GH V I F SG+ L +C D + +L D + + GH+ VS + P+
Sbjct: 146 LKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPN 203
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + + D + ++W++ G V GH + V + DG+++A+ D RVW +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHL----ATGSE 384
T C L H V + ++P+ + ATGSE
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V+R+ FHP + + D + ++WD G +GH V +SF G
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+ D ++WD + CI + GH +V SV P+G H+ + S D +K+W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 395 KRRLLK-------WCTQLLPNSIG 411
+K W + PN G
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDG 246
Score = 147 (56.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G + + D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 143 (55.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD---HSG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 163 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G + +C D + R+W + + H
Sbjct: 220 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 325 VYCMSFQGDGS 335
V C+S+ + S
Sbjct: 279 VECISWAPESS 289
Score = 113 (44.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 37/150 (24%), Positives = 63/150 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + SF + +A+ S KLW E ++T GHD NV ++ P G
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S ++D ++K+W + + GH + V ++ + G + +C D + W
Sbjct: 205 D--HIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRF 294
+ T A L HE V I + P +
Sbjct: 262 VVATKECKAELREHEHV-VECISWAPESSY 290
Score = 113 (44.8 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F G + + ++D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 368 KNKRCMK 374
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W +T L+GH V I F S
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHS 161
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 162 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++TG C+ GH + V V + DG +A+ S D V++W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 58/217 (26%), Positives = 97/217 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERT 145
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPS 291
L+GH V I F SG+ L +C D + +L D + + GH+ VS + P+
Sbjct: 146 LKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPN 203
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + + D + ++W++ G V GH + V + DG+++A+ D RVW +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHL----ATGSE 384
T C L H V + ++P+ + ATGSE
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V+R+ FHP + + D + ++WD G +GH V +SF G
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+ D ++WD + CI + GH +V SV P+G H+ + S D +K+W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 395 KRRLLK-------WCTQLLPNSIG 411
+K W + PN G
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDG 246
Score = 147 (56.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G + + D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 143 (55.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD---HSG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 163 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G + +C D + R+W + + H
Sbjct: 220 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 325 VYCMSFQGDGS 335
V C+S+ + S
Sbjct: 279 VECISWAPESS 289
Score = 113 (44.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 37/150 (24%), Positives = 63/150 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + SF + +A+ S KLW E ++T GHD NV ++ P G
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S ++D ++K+W + + GH + V ++ + G + +C D + W
Sbjct: 205 D--HIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRF 294
+ T A L HE V I + P +
Sbjct: 262 VVATKECKAELREHEHV-VECISWAPESSY 290
Score = 113 (44.8 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F G + + ++D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 368 KNKRCMK 374
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W +T L+GH V I F S
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHS 161
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 162 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++TG C+ GH + V V + DG +A+ S D V++W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 58/217 (26%), Positives = 97/217 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERT 145
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPS 291
L+GH V I F SG+ L +C D + +L D + + GH+ VS + P+
Sbjct: 146 LKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPN 203
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + + D + ++W++ G V GH + V + DG+++A+ D RVW +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHL----ATGSE 384
T C L H V + ++P+ + ATGSE
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V+R+ FHP + + D + ++WD G +GH V +SF G
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+ D ++WD + CI + GH +V SV P+G H+ + S D +K+W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 395 KRRLLK-------WCTQLLPNSIG 411
+K W + PN G
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDG 246
Score = 147 (56.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G + + D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 143 (55.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD---HSG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 163 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G + +C D + R+W + + H
Sbjct: 220 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 325 VYCMSFQGDGS 335
V C+S+ + S
Sbjct: 279 VECISWAPESS 289
Score = 113 (44.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 37/150 (24%), Positives = 63/150 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + SF + +A+ S KLW E ++T GHD NV ++ P G
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S ++D ++K+W + + GH + V ++ + G + +C D + W
Sbjct: 205 D--HIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRF 294
+ T A L HE V I + P +
Sbjct: 262 VVATKECKAELREHEHV-VECISWAPESSY 290
Score = 113 (44.8 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F G + + ++D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 368 KNKRCMK 374
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W +T L+GH V I F S
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHS 161
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 162 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++TG C+ GH + V V + DG +A+ S D V++W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 58/217 (26%), Positives = 97/217 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERT 145
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPS 291
L+GH V I F SG+ L +C D + +L D + + GH+ VS + P+
Sbjct: 146 LKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPN 203
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + + D + ++W++ G V GH + V + DG+++A+ D RVW +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHL----ATGSE 384
T C L H V + ++P+ + ATGSE
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V+R+ FHP + + D + ++WD G +GH V +SF G
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+ D ++WD + CI + GH +V SV P+G H+ + S D +K+W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 395 KRRLLK-------WCTQLLPNSIG 411
+K W + PN G
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDG 246
Score = 147 (56.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G + + D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 143 (55.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD---HSG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 163 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G + +C D + R+W + + H
Sbjct: 220 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 325 VYCMSFQGDGS 335
V C+S+ + S
Sbjct: 279 VECISWAPESS 289
Score = 113 (44.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 37/150 (24%), Positives = 63/150 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + SF + +A+ S KLW E ++T GHD NV ++ P G
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S ++D ++K+W + + GH + V ++ + G + +C D + W
Sbjct: 205 D--HIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRF 294
+ T A L HE V I + P +
Sbjct: 262 VVATKECKAELREHEHV-VECISWAPESSY 290
Score = 113 (44.8 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F G + + ++D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 368 KNKRCMK 374
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W +T L+GH V I F S
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHS 161
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 162 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++TG C+ GH + V V + DG +A+ S D V++W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 58/217 (26%), Positives = 97/217 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERT 145
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPS 291
L+GH V I F SG+ L +C D + +L D + + GH+ VS + P+
Sbjct: 146 LKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPN 203
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + + D + ++W++ G V GH + V + DG+++A+ D RVW +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHL----ATGSE 384
T C L H V + ++P+ + ATGSE
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V+R+ FHP + + D + ++WD G +GH V +SF G
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+ D ++WD + CI + GH +V SV P+G H+ + S D +K+W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 395 KRRLLK-------WCTQLLPNSIG 411
+K W + PN G
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDG 246
Score = 147 (56.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G + + D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 143 (55.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD---HSG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 163 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G + +C D + R+W + + H
Sbjct: 220 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 325 VYCMSFQGDGS 335
V C+S+ + S
Sbjct: 279 VECISWAPESS 289
Score = 113 (44.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 37/150 (24%), Positives = 63/150 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + SF + +A+ S KLW E ++T GHD NV ++ P G
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S ++D ++K+W + + GH + V ++ + G + +C D + W
Sbjct: 205 D--HIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRF 294
+ T A L HE V I + P +
Sbjct: 262 VVATKECKAELREHEHV-VECISWAPESSY 290
Score = 113 (44.8 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F G + + ++D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 368 KNKRCMK 374
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W +T L+GH V I F S
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHS 161
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 162 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++TG C+ GH + V V + DG +A+ S D V++W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 58/217 (26%), Positives = 97/217 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERT 145
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPS 291
L+GH V I F SG+ L +C D + +L D + + GH+ VS + P+
Sbjct: 146 LKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPN 203
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + + D + ++W++ G V GH + V + DG+++A+ D RVW +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHL----ATGSE 384
T C L H V + ++P+ + ATGSE
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V+R+ FHP + + D + ++WD G +GH V +SF G
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+ D ++WD + CI + GH +V SV P+G H+ + S D +K+W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 395 KRRLLK-------WCTQLLPNSIG 411
+K W + PN G
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDG 246
Score = 147 (56.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G + + D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 143 (55.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD---HSG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 163 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G + +C D + R+W + + H
Sbjct: 220 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 325 VYCMSFQGDGS 335
V C+S+ + S
Sbjct: 279 VECISWAPESS 289
Score = 113 (44.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 37/150 (24%), Positives = 63/150 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + SF + +A+ S KLW E ++T GHD NV ++ P G
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S ++D ++K+W + + GH + V ++ + G + +C D + W
Sbjct: 205 D--HIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRF 294
+ T A L HE V I + P +
Sbjct: 262 VVATKECKAELREHEHV-VECISWAPESSY 290
Score = 113 (44.8 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F G + + ++D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 368 KNKRCMK 374
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W +T L+GH V I F S
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHS 161
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 162 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++TG C+ GH + V V + DG +A+ S D V++W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 58/217 (26%), Positives = 97/217 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERT 145
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPS 291
L+GH V I F SG+ L +C D + +L D + + GH+ VS + P+
Sbjct: 146 LKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPN 203
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + + D + ++W++ G V GH + V + DG+++A+ D RVW +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHL----ATGSE 384
T C L H V + ++P+ + ATGSE
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V+R+ FHP + + D + ++WD G +GH V +SF G
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+ D ++WD + CI + GH +V SV P+G H+ + S D +K+W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 395 KRRLLK-------WCTQLLPNSIG 411
+K W + PN G
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDG 246
Score = 147 (56.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G + + D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 143 (55.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD---HSG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 163 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G + +C D + R+W + + H
Sbjct: 220 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 325 VYCMSFQGDGS 335
V C+S+ + S
Sbjct: 279 VECISWAPESS 289
Score = 113 (44.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 37/150 (24%), Positives = 63/150 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + SF + +A+ S KLW E ++T GHD NV ++ P G
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S ++D ++K+W + + GH + V ++ + G + +C D + W
Sbjct: 205 D--HIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRF 294
+ T A L HE V I + P +
Sbjct: 262 VVATKECKAELREHEHV-VECISWAPESSY 290
Score = 113 (44.8 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F G + + ++D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 368 KNKRCMK 374
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W +T L+GH V I F S
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVQDISFDHS 161
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 162 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++TG C+ GH + V V + DG +A+ S D V++W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 58/217 (26%), Positives = 97/217 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERT 145
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPS 291
L+GH V I F SG+ L +C D + +L D + + GH+ VS + P+
Sbjct: 146 LKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPN 203
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + + D + ++W++ G V GH + V + DG+++A+ D RVW +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHL----ATGSE 384
T C L H V + ++P+ + ATGSE
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V+R+ FHP + + D + ++WD G +GH V +SF G
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+ D ++WD + CI + GH +V SV P+G H+ + S D +K+W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 395 KRRLLK-------WCTQLLPNSIG 411
+K W + PN G
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDG 246
Score = 147 (56.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G + + D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 143 (55.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD---HSG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 163 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G + +C D + R+W + + H
Sbjct: 220 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 325 VYCMSFQGDGS 335
V C+S+ + S
Sbjct: 279 VECISWAPESS 289
Score = 113 (44.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 37/150 (24%), Positives = 63/150 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + SF + +A+ S KLW E ++T GHD NV ++ P G
Sbjct: 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S ++D ++K+W + + GH + V ++ + G + +C D + W
Sbjct: 205 D--HIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRF 294
+ T A L HE V I + P +
Sbjct: 262 VVATKECKAELREHEHV-VECISWAPESSY 290
Score = 113 (44.8 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F G + + ++D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 368 KNKRCMK 374
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
L GH V+R+ FHP + + D + W +T L+GH V I F S
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-SVEDISFDHS 161
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
G+ L +C D + +LWD QG E + GH V ++ +G + + D ++W+
Sbjct: 162 GKLLASCSADMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
++TG C+ GH + V V + DG +A+ S D V++W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 58/217 (26%), Positives = 97/217 (44%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 92 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERT 145
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANLEGHEPFRVSRIKFHPS 291
L+GH V I F SG+ L +C D + +L D + + GH+ VS + P+
Sbjct: 146 LKGHTD-SVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPN 203
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G + + D + ++W++ G V GH + V + DG+++A+ D RVW +
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHL----ATGSE 384
T C L H V + ++P+ + ATGSE
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Score = 172 (65.6 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH V+R+ FHP + + D + ++WD G +GH V +SF G
Sbjct: 104 LSGHRS-PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSG 162
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
++A+ D ++WD + CI + GH +V SV P+G H+ + S D +K+W+++
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 395 KRRLLK-------WCTQLLPNSIG 411
+K W + PN G
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDG 246
Score = 147 (56.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
G FL + D + ++WD++ G ++ GH V + F G + + D RVWD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 143 (55.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 45/191 (23%), Positives = 81/191 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F G
Sbjct: 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFD---HSG 162
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ LASC+ D ++KLW + + GH+ VS + P+G + + D + W
Sbjct: 163 KL--LASCSADMTIKLWDFQGFECIRTMHGHD-HNVSSVAIMPNGDHIVSASRDKTIKMW 219
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ T + GH + V ++ + G + +C D + R+W + + H
Sbjct: 220 EVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 325 VYCMSFQGDGS 335
V C+S+ + S
Sbjct: 279 VECISWAPESS 289
Score = 113 (44.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 37/150 (24%), Positives = 63/150 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T + SF + +A+ S KLW E ++T GHD NV ++ P G
Sbjct: 148 GHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP---NG 204
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+ S ++D ++K+W + + GH + V ++ + G + +C D + W
Sbjct: 205 D--HIVSASRDKTIKMWEVQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 267 RLDTP--LANLEGHEPFRVSRIKFHPSGRF 294
+ T A L HE V I + P +
Sbjct: 262 VVATKECKAELREHEHV-VECISWAPESSY 290
Score = 113 (44.8 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G + +G D ++WD+ TG C+M L GH V V F G + + ++D +++WD
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 394 RKRRLLK 400
+ +R +K
Sbjct: 368 KNKRCMK 374
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 214 (80.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 61/253 (24%), Positives = 119/253 (47%)
Query: 146 CSQV--GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFH 203
C ++ G T+ ++ + D + ++S K+W + L +T +GH V +
Sbjct: 251 CDKILTGHTQSVTCVKWGGDGL-LYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMA-- 307
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL-GTCCW 262
L ++ + + A + ++ D LA L+ R +++ R + G+ +
Sbjct: 308 -LSTDYVLRTGAFEPAEATIN--PQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDF 364
Query: 263 D-HSWRL---DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
WR PL + GH+ ++++ F P R + + +D S +LW+ G+ +
Sbjct: 365 TLFLWRPAEDKKPLERMTGHQAL-INQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSL 423
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
GH VY +++ D ++ +G D+ +VWD T + + L GH VF+ D+SPDG
Sbjct: 424 RGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQR 483
Query: 379 LATGSEDNAVKIW 391
+A+G +D ++IW
Sbjct: 484 VASGGKDKCLRIW 496
Score = 184 (69.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 57/245 (23%), Positives = 113/245 (46%)
Query: 161 SPDSQHVATASWSGLCKLWT--VPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+P+ +++A+AS G ++W + C+ + T GH +V +++ +G L S +
Sbjct: 226 NPECRYLASASKDGSIRIWDTLMGRCDKILT--GHTQSVTCVKWG---GDGL---LYSSS 277
Query: 219 QDGSVKLWSLDKDTPLANLEGH----EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN 274
QD ++K+W L+GH +S +G F + + LA
Sbjct: 278 QDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMSGSLAE 337
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGD 333
L+ R +++ R + D + LW + ++ L + GH + + F D
Sbjct: 338 LKDKAQQRYDKVRGQGPERLVSGSD-DFTLFLWRPAEDKKPLERMTGHQALINQVLFSPD 396
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
++A+ D ++W+ RTG+ + L GH+ +V+ + +S D L +GS D+ +K+WD
Sbjct: 397 TRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDA 456
Query: 394 RKRRL 398
++L
Sbjct: 457 ETKKL 461
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 62/217 (28%), Positives = 96/217 (44%)
Query: 181 VPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
V C + GH V ++ F P G LAS + D +V+ W L +TP +GH
Sbjct: 116 VTRC--TSSLEGHTEAVISVAFSPT---GKY--LASGSGDTTVRFWDLSTETPQFTAKGH 168
Query: 241 EPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLAN-----LEGHEPFRV----SRIKFHP 290
+ +S I + P G+ L + C + L D N L GH + + +P
Sbjct: 169 RHWVLS-IAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINP 227
Query: 291 SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
R+L + D S R+WD G+ GH + V C+ + GDG ++ + D +VW
Sbjct: 228 ECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKVWR 286
Query: 351 LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
+ G L+GH V ++ S D Y L TG+ + A
Sbjct: 287 SQDGILCRTLQGHAHWVNTMALSTD-YVLRTGAFEPA 322
Score = 149 (57.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
++LEGH +S + F P+G++L + D + R WDL+ +GH V +++
Sbjct: 121 SSLEGHTEAVIS-VAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSP 179
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCI-MFLEGHLKSVFSV-----DFSPDGYHLATGSEDN 386
DG +A+G ++ +WD TG I L GH K + + +P+ +LA+ S+D
Sbjct: 180 DGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDG 239
Query: 387 AVKIWD 392
+++IWD
Sbjct: 240 SIRIWD 245
Score = 99 (39.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 51/205 (24%), Positives = 85/205 (41%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQ-TFRGHDCNVGAIEFHPLPSE 208
G T + +FSP +++A+ S + W + E Q T +GH V +I + P +
Sbjct: 125 GHTEAVISVAFSPTGKYLASGSGDTTVRFWDL-STETPQFTAKGHRHWVLSIAWSP---D 180
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLAN-LEGHEPFRV----SRIKFHPSGRFLGTCCWD 263
G LAS ++ + LW + L GH + + +P R+L + D
Sbjct: 181 GK--KLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKD 238
Query: 264 HSWRL-DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
S R+ DT + L GH V+ +K+ G L + D + ++W G
Sbjct: 239 GSIRIWDTLMGRCDKILTGHTQ-SVTCVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRTL 296
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLD 343
+GH V M+ D V+ TG +
Sbjct: 297 QGHAHWVNTMALSTD-YVLRTGAFE 320
Score = 68 (29.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 331 QGDGSVVATGGLDAFGR-VW-DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+G G G D F +W + + + GH + V FSPD +A+ S D ++
Sbjct: 350 RGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSI 409
Query: 389 KIWDLRKRRLL 399
K+W+ R + L
Sbjct: 410 KLWEGRTGKYL 420
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 215 (80.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 61/214 (28%), Positives = 96/214 (44%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRV 245
+Q H NV ++ S G + LA+ D V +WS++K + +L GH P
Sbjct: 13 LQEIVAHSSNVSSLVLGK--STGRL--LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIES 68
Query: 246 SRIKFHPSGRFLGTCCWD-HSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 302
+I G+ W L+ L L GH+ + + FHP G F+ + D
Sbjct: 69 LQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKA-NICSLDFHPYGSFVASGSLDT 127
Query: 303 SWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
+LWD+ + + + H + V C+ F DG +A+ D ++WDL G+ + G
Sbjct: 128 DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 187
Query: 363 HLKSVFSVDFSPD-GYHLATGSEDNAVKIWDLRK 395
H V V+F P Y LA+GS ++ WDL K
Sbjct: 188 HYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEK 221
Score = 211 (79.3 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 62/217 (28%), Positives = 98/217 (45%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T PI S + + S SG ++W + ++++T GH N+ +++FHP
Sbjct: 58 SLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG 117
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
S +AS + D +KLW + + + + H V ++F P G++L + DH+
Sbjct: 118 S-----FVASGSLDTDIKLWDVRRKGCIFKYKSHTQ-AVRCLRFSPDGKWLASAADDHTV 171
Query: 266 --WRLDTPLANLE--GHE-PFRVSRIKFHPSGRFL-GTCCWDHSWRLWDLNQGQEVLHQE 319
W L E GH P V ++FHPS +L + + R WDL + V E
Sbjct: 172 KLWDLTAGKVMFEFTGHYGPVNV--VEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIE 229
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
PV C+ F DG + G D+ RV+ RC
Sbjct: 230 EEATPVRCILFNPDGCCLYGGFQDSL-RVYGWEPERC 265
Score = 197 (74.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 58/222 (26%), Positives = 100/222 (45%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
+W+V + V + GH + +++ E + + +Q GS+++W L+ L L
Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISA--KEELI---VAGSQSGSIRVWDLEAAKILRTL 101
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPSG 292
GH+ + + FHP G F+ + D W R + + H V ++F P G
Sbjct: 102 LGHKA-NICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQ-AVRCLRFSPDG 159
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS-VVATGGLDAFGRVWDL 351
++L + DH+ +LWDL G+ + GH PV + F ++A+G R WDL
Sbjct: 160 KWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDL 219
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA-VKIWD 392
+ +E V + F+PDG L G +D+ V W+
Sbjct: 220 EKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWE 261
Score = 183 (69.5 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 45/152 (29%), Positives = 76/152 (50%)
Query: 253 SGRFLGTC---CWDHSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
+GR L T C + W ++ P + +L GH + ++ + S R+W
Sbjct: 32 TGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTT-PIESLQISAKEELIVAGSQSGSIRVW 90
Query: 308 DLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSV 367
DL + + GH + + F GS VA+G LD ++WD+R CI + H ++V
Sbjct: 91 DLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAV 150
Query: 368 FSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
+ FSPDG LA+ ++D+ VK+WDL +++
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKVM 182
Score = 120 (47.3 bits), Expect = 0.00062, P = 0.00062
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G ++ATGG D VW + C+M L GH + S+ S + GS+ ++++WDL
Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 394 RKRRLLKWCTQLLPNSIGVTSL 415
++L+ LL + + SL
Sbjct: 93 EAAKILR---TLLGHKANICSL 111
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 203 (76.5 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 70/242 (28%), Positives = 111/242 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + ++ + L S +QDG + +W D+ N P R S
Sbjct: 5 RTLRGHLAKIYAMHWG---TDSRL--LVSASQDGKLIIW----DSYTTNKVHAIPLRSSW 55
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG F+ D+ + L T N L GH + +S +F + +
Sbjct: 56 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQII 114
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ + GH V +S DG +G DA ++WD+R
Sbjct: 115 -TSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM 173
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK-RRLLKWCTQLLPNSI-GVT 413
C GH + +V F P+GY TGS+D +++DLR + LL + N I G+T
Sbjct: 174 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHD---NIICGIT 230
Query: 414 SL 415
S+
Sbjct: 231 SV 232
Score = 199 (75.1 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D+Q + T+S C LW + + F GH +V ++ P +G
Sbjct: 97 GHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP---DG 152
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+C D S+KLW + GHE ++ + F P+G T D + RL
Sbjct: 153 RTFVSGAC--DASIKLWDVRDSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLF 209
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD +G GH
Sbjct: 210 DLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDN 269
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F ++W+
Sbjct: 270 RVSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 168 (64.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 65/249 (26%), Positives = 103/249 (41%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P VA +C ++++ E V+ R GH + F L + S
Sbjct: 59 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITS 116
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS---WRLD 269
+ D + LW ++ GH V + P GR F+ C D S W +
Sbjct: 117 ----SGDTTCALWDIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVR 170
Query: 270 TPLANLE--GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GHE ++ + F P+G T D + RL+DL QE+L H + C
Sbjct: 171 DSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDN-IIC 227
Query: 328 ----MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
++F G ++ G D +WD G L GH V + + DG +ATGS
Sbjct: 228 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGS 287
Query: 384 EDNAVKIWD 392
D+ +KIW+
Sbjct: 288 WDSFLKIWN 296
Score = 127 (49.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 211 VCSLASC-AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+CS+ S ++G+V++ ++ P GH + +S +F + + T D + W
Sbjct: 76 ICSIYSLKTREGNVRV---SRELP-----GHTGY-LSCCRFLDDNQII-TSSGDTTCALW 125
Query: 267 RLDT--PLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
++T GH V + P GR F+ C D S +LWD+ GH
Sbjct: 126 DIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVRDSMCRQTFIGHES 183
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR-CIMFLEGHLK-SVFSVDFSPDGYHLAT 381
+ ++F +G TG DA R++DLR + +M+ ++ + SV FS G L
Sbjct: 184 DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLA 243
Query: 382 GSEDNAVKIWDLRK 395
G +D IWD K
Sbjct: 244 GYDDFNCNIWDAMK 257
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 190 (71.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 38/94 (40%), Positives = 54/94 (57%)
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D + RLW QG V GH PV +SF +G +A+ G D ++WDL +G L
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
GH S+ S+ FSPD +A+ S DN+V++WD+R
Sbjct: 61 RGHTDSITSLAFSPDSGLIASASMDNSVRVWDIR 94
Score = 127 (49.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 34/122 (27%), Positives = 55/122 (45%)
Query: 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSV 336
GH V + F P+G++L + D +LWDL G GH + ++F D +
Sbjct: 20 GHRG-PVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGL 78
Query: 337 VATGGLDAFGRVWDLRT-----------GRCIMFLEGHLKSVFSVDFSPDGYHLATG-SE 384
+A+ +D RVWD+R+ G + G + +V SV F L TG ++
Sbjct: 79 IASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQ 138
Query: 385 DN 386
+N
Sbjct: 139 EN 140
Score = 121 (47.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 347 RVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLL 406
R+W + G + GH V S+ FSP+G +LA+ ED +K+WDL L K +L
Sbjct: 5 RLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFK---ELR 61
Query: 407 PNSIGVTSL 415
++ +TSL
Sbjct: 62 GHTDSITSL 70
Score = 106 (42.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P+ SFSP+ +++A+A KLW + L + RGH ++ ++ F P G
Sbjct: 20 GHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSP--DSG 77
Query: 210 AVCSLASCAQDGSVKLWSL 228
+ AS + D SV++W +
Sbjct: 78 LI---ASASMDNSVRVWDI 93
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 206 (77.6 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 61/207 (29%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F DSQ + T+S C LW + + TF GH +V ++ P
Sbjct: 141 GHTGYLSCCRFLDDSQ-IVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSP----- 194
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ + S A D S KLW + + GH ++ + F P+G T D + RL
Sbjct: 195 DMRTFVSGACDASSKLWDIRDGMCRQSFTGHVS-DINAVSFFPNGYAFATGSDDATCRLF 253
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD +G GH
Sbjct: 254 DLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDN 313
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F R+W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 203 (76.5 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 70/242 (28%), Positives = 109/242 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + S L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG-YDSR----LLVSASQDGKLIIW----DSYTTNKMHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG ++ D+ + L T N L GH + +S +F + +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGY-LSCCRFLDDSQIV 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ Q+ GH V +S D +G DA ++WD+R G
Sbjct: 159 -TSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK-RRLLKWCTQLLPNSI-GVT 413
C GH+ + +V F P+GY ATGS+D +++DLR + LL + N I G+T
Sbjct: 218 CRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYSHD---NIICGIT 274
Query: 414 SL 415
S+
Sbjct: 275 SV 276
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 63/248 (25%), Positives = 101/248 (40%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P +VA +C ++ + E V+ R GH + F L V S
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRF--LDDSQIVTS 160
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS--WRLDT 270
+ D + LW ++ GH V + P R F+ C S W +
Sbjct: 161 ----SGDTTCALWDIETAQQTTTFTGHSG-DVMSLSLSPDMRTFVSGACDASSKLWDIRD 215
Query: 271 PLA--NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC- 327
+ + GH ++ + F P+G T D + RL+DL QE+L H + C
Sbjct: 216 GMCRQSFTGHVS-DINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYS-HDN-IICG 272
Query: 328 ---MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
++F G ++ G D VWD G L GH V + + DG +ATGS
Sbjct: 273 ITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSW 332
Query: 385 DNAVKIWD 392
D+ ++IW+
Sbjct: 333 DSFLRIWN 340
Score = 132 (51.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 45/142 (31%), Positives = 61/142 (42%)
Query: 259 TCC-WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVL 316
TC WD T GH V + P R F+ C D S +LWD+ G
Sbjct: 165 TCALWDIETAQQT--TTFTGHSG-DVMSLSLSPDMRTFVSGAC-DASSKLWDIRDGMCRQ 220
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH---LKSVFSVDFS 373
GH + +SF +G ATG DA R++DLR + ++ L H + + SV FS
Sbjct: 221 SFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELL-LYSHDNIICGITSVAFS 279
Query: 374 PDGYHLATGSEDNAVKIWDLRK 395
G L G +D +WD K
Sbjct: 280 KSGRLLLAGYDDFNCNVWDTLK 301
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 212 (79.7 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 75/259 (28%), Positives = 118/259 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
GD S C FSPD +++AT + ++W + + F GH+ ++ +++F G
Sbjct: 315 GDLYIRSVC-FSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDF---AGNG 370
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANL---EGHEPFRVSRIKFHPSGRFLGTCC--WDH 264
+AS + D +V+LW + + + L +G +S + + L WD
Sbjct: 371 RY--IASGSGDKTVRLWDIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDT 428
Query: 265 SWR-LDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL------- 316
+ L L N +GH+ V + F P+G+ L + D + +LW+LN ++
Sbjct: 429 TTGYLVERLENPDGHKD-SVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGG 487
Query: 317 --HQ--EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372
H+ EGH V + DG V +G D + WD TG M L+GH SV SV
Sbjct: 488 KCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAP 547
Query: 373 SPDGYHLATGSEDNAVKIW 391
SP G ATGS D +IW
Sbjct: 548 SPTGNLFATGSGDMRARIW 566
Score = 208 (78.3 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 53/161 (32%), Positives = 81/161 (50%)
Query: 245 VSRIKFHPSGRFLGTCCWDHS---WRLDTPLAN--LEGHEPFRVSRIKFHPSGRFLGTCC 299
+ + F P G++L T D W + T GHE + + F +GR++ +
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQ-DIYSLDFAGNGRYIASGS 377
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + RLWD+ +G+ +++ V ++ DG VA G LD RVWD TG +
Sbjct: 378 GDKTVRLWDIAEGK-LVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVER 436
Query: 360 LE---GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
LE GH SV+SV F+P+G L +GS D +K+W+L R
Sbjct: 437 LENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPR 477
Score = 186 (70.5 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 50/161 (31%), Positives = 85/161 (52%)
Query: 268 LDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV--LHQEGHGKP- 324
LD L + H+ V ++F G++L T C + S +++D+ GQ V L E K
Sbjct: 258 LDVELVHHLVHDSV-VCCVRFSRDGKYLATGC-NRSAQIFDVTLGQNVAVLQDESVDKSG 315
Query: 325 -VYCMS--FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+Y S F DG +ATG D RVWD+ T GH + ++S+DF+ +G ++A+
Sbjct: 316 DLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIAS 375
Query: 382 GSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTD-LYI 421
GS D V++WD+ + +L+ T + + + ++ D LY+
Sbjct: 376 GSGDKTVRLWDIAEGKLVY--TLSIEDGVTTVAMSPDGLYV 414
Score = 184 (69.8 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 44/155 (28%), Positives = 75/155 (48%)
Query: 248 IKFHPSGRFLGTCCWDHSWRLDTPLA---------NLEGHEPFRVSRIKFHPSGRFLGTC 298
++F G++L T C + D L +++ + + F P G++L T
Sbjct: 275 VRFSRDGKYLATGCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPDGKYLATG 334
Query: 299 CWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI 357
D R+WD+ + + H GH + +Y + F G+G +A+G D R+WD+ G+ +
Sbjct: 335 AEDKQIRVWDIAT-RTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLV 393
Query: 358 MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
L V +V SPDG ++A GS D V++WD
Sbjct: 394 YTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRVWD 427
Score = 167 (63.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 54/200 (27%), Positives = 92/200 (46%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS-----RIKFHPSGRFLGTC-CWDHS-W 266
LA+ A+D +++W + T GHE S ++ SG T WD +
Sbjct: 331 LATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEG 390
Query: 267 RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG---QEVLHQEGHGK 323
+L L+ +G V+ + P G ++ D + R+WD G + + + +GH
Sbjct: 391 KLVYTLSIEDG-----VTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKD 445
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDL-----------RTGRCIMFLEGHLKSVFSVDF 372
VY ++F +G + +G LD ++W+L + G+C EGH V SV
Sbjct: 446 SVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCL 505
Query: 373 SPDGYHLATGSEDNAVKIWD 392
+PDG+ + +GS+D V+ WD
Sbjct: 506 TPDGHWVMSGSKDRGVQFWD 525
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 211 (79.3 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 61/228 (26%), Positives = 99/228 (43%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+ T+S K+W L+QT H V H S + A G V
Sbjct: 296 IYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVN----HLALSTDFILRTAYHDHTGKVPES 351
Query: 227 SLDKDTPLANLEGHEPFRVS-RI--KFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRV 283
DK +A + ++ +I K + WD P+A L GH+ V
Sbjct: 352 DADK-VAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPE-SSSKPVARLLGHQK-EV 408
Query: 284 SRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLD 343
+ + F P ++ + +D+ +LW+ G+ + GH VY F D ++ + D
Sbjct: 409 NHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKD 468
Query: 344 AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
+VW++RTG+ L GH VF+VD+SPDG + +G +D A++IW
Sbjct: 469 TTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 174 (66.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 64/231 (27%), Positives = 104/231 (45%)
Query: 192 GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
GH + A F P+ S ++ S + D + ++W D TPL L+GH + V + +
Sbjct: 146 GHGEAILATSFSPVSSS----TMVSGSGDSTARIWDCDTGTPLHTLKGHTSW-VLAVSYS 200
Query: 252 PSGRFLGTCCWDHSWRL-DTPL-----ANLEGHEPFRVSRIKFHP-----SGR-FLGTCC 299
P+G + T D++ R+ D A L+GH + ++ + + P SG L +
Sbjct: 201 PNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKW-ITSLAWEPYHLQQSGHPRLASAS 259
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + R+WD+ + + GH V C+ + G G + T D +VW+ +TG I
Sbjct: 260 KDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIY-TSSHDRTIKVWNSQTGTLIQT 318
Query: 360 LEGHLKSVFSVDFSPD-----GYHLATGS--EDNAVKIWDLRKRRLLKWCT 403
L H V + S D YH TG E +A K+ + K+R K T
Sbjct: 319 LSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKV-AMAKKRFEKAAT 368
Score = 174 (66.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 56/235 (23%), Positives = 103/235 (43%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+A+AS ++W V GH +V + + G + + + D ++K+W
Sbjct: 255 LASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRW------GGTGKIYTSSHDRTIKVW 308
Query: 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN--LEGHEPFRVS 284
+ T + L H RV+ + + L T DH+ ++ A+ + F +
Sbjct: 309 NSQTGTLIQTLSAHA-HRVNHLALS-TDFILRTAYHDHTGKVPESDADKVAMAKKRFEKA 366
Query: 285 RIKFHPSGRFLGTCCWDHSWRLWDLNQGQE-VLHQEGHGKPVYCMSFQGDGSVVATGGLD 343
+ L + D + LWD + V GH K V ++F D + +A+ G D
Sbjct: 367 ATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFD 426
Query: 344 AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
++W+ R G+ I L GH+ +V+ FS D L + S+D +K+W++R +L
Sbjct: 427 NHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKL 481
Score = 168 (64.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 37/95 (38%), Positives = 52/95 (54%)
Query: 320 GHGKPVYCMSFQG-DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
GHG+ + SF S + +G D+ R+WD TG + L+GH V +V +SP+G
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAM 205
Query: 379 LATGSEDNAVKIWDLRKRRLL--------KWCTQL 405
+ATGS DN V+IWD +K + L KW T L
Sbjct: 206 IATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSL 240
Score = 163 (62.4 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 40/133 (30%), Positives = 73/133 (54%)
Query: 273 ANLEGHEPFRVSRIKFHP-SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ 331
A++ GH + F P S + + D + R+WD + G + +GH V +S+
Sbjct: 142 ASIAGHGE-AILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYS 200
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMF-LEGHLKSVFSVDFSP-----DGY-HLATGSE 384
+G+++ATG +D R+WD + G+ + L+GH+K + S+ + P G+ LA+ S+
Sbjct: 201 PNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASK 260
Query: 385 DNAVKIWDLRKRR 397
D+ V+IWD+ +R
Sbjct: 261 DSTVRIWDVISKR 273
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 61/260 (23%), Positives = 117/260 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFRGHDCNVGAIEFHP--LP 206
G T + S+SP+ +AT S ++W + + L +GH + ++ + P L
Sbjct: 189 GHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQ 248
Query: 207 SEGAVCSLASCAQDGSVKLWS-LDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
G LAS ++D +V++W + K + L GH+ V+ +++ +G+ T D +
Sbjct: 249 QSGHP-RLASASKDSTVRIWDVISKRADIV-LSGHKG-SVTCVRWGGTGKIY-TSSHDRT 304
Query: 266 ---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W T + L H RV+ + + L T DH+ ++ + + + + ++
Sbjct: 305 IKVWNSQTGTLIQTLSAHA-HRVNHLALS-TDFILRTAYHDHTGKVPESDADKVAMAKKR 362
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG-RCIMFLEGHLKSVFSVDFSPDGYHL 379
K + + V A+ + +WD + + + L GH K V V FSPD ++
Sbjct: 363 FEKAATINNKIVEKLVSASDDFTMY--LWDPESSSKPVARLLGHQKEVNHVTFSPDMAYI 420
Query: 380 ATGSEDNAVKIWDLRKRRLL 399
A+ DN VK+W+ R + +
Sbjct: 421 ASAGFDNHVKLWNGRDGKFI 440
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 31/120 (25%), Positives = 64/120 (53%)
Query: 149 VGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
+G + +++ +FSPD ++A+A + KLW + + + T RGH VGA+ ++
Sbjct: 402 LGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGH---VGAVYQCCFSAD 458
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
+ L S ++D ++K+W++ +L GH+ V + + P G+ +G+ D + R+
Sbjct: 459 SRL--LVSSSKDTTLKVWNVRTGKLSEDLPGHKD-EVFAVDWSPDGQKVGSGGKDKAIRI 515
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 204 (76.9 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 62/224 (27%), Positives = 99/224 (44%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL---EGHEP 242
L T +GH + + +HP +G S ASC +D ++++WSL +T +GH+
Sbjct: 6 LEHTLQGHKGRIWGVAWHP---KGN--SFASCGEDKAIRIWSLSGNTWTTKTILSDGHKR 60
Query: 243 FRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC 299
+ +++ P G +L + +D + W A LEGHE V + + SG L TC
Sbjct: 61 -TIREVRWSPCGEYLASASFDATTAIWSKHECTATLEGHEN-EVKSVSWSRSGGLLATCS 118
Query: 300 WDHSWRLWDLNQGQE---VLHQEGHGKPVYCMSFQGDGSVVATGGLD---------AFGR 347
D S +W++ E H + V + + V+A+ D A
Sbjct: 119 RDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEVLASASYDNTIKMFAESALDS 178
Query: 348 VWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
WD C L H +V+S+DF DG L + S+D +KIW
Sbjct: 179 DWD-----CTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIW 217
Score = 151 (58.2 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ---EVLHQEGHGKPVYCMSFQ 331
L+GH+ R+ + +HP G +C D + R+W L+ + + +GH + + + +
Sbjct: 10 LQGHKG-RIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWS 68
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
G +A+ DA +W C LEGH V SV +S G LAT S D +V IW
Sbjct: 69 PCGEYLASASFDATTAIWSKH--ECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIW 126
Query: 392 DL 393
++
Sbjct: 127 EV 128
Score = 133 (51.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G R I +SP +++A+AS+ +W+ EC T GH+ V ++ + G
Sbjct: 57 GHKRTIREVRWSPCGEYLASASFDATTAIWSKHEC--TATLEGHENEVKSVSWS---RSG 111
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPL---ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 266
+ LA+C++D SV +W + D A L H V R+ +HP+ L + +D++
Sbjct: 112 GL--LATCSRDKSVWIWEVAGDDEFECAAVLNAHSQ-DVKRVVWHPTKEVLASASYDNTI 168
Query: 267 R------LDTP---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
+ LD+ A L H V I F G L +C D + ++W
Sbjct: 169 KMFAESALDSDWDCTATLSSHTS-TVWSIDFDADGERLVSCSDDATLKIW 217
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 211 (79.3 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 62/216 (28%), Positives = 96/216 (44%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
S G T PI S + + S SG ++W + ++++T GH N+ +++FHP
Sbjct: 58 SLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG 117
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
S +AS + D +KLW + + + + H V ++F P G++L + DH+
Sbjct: 118 S-----FVASGSLDTDIKLWDVRRKGCIFKYKSHTQ-AVRCLRFSPDGKWLASAADDHTV 171
Query: 266 --WRLDTPLANLE--GHE-PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
W L E GH P V ++FHPS L + R WDL + V E
Sbjct: 172 KLWDLTAGKVMFEFTGHYGPVNV--VEFHPSEYPLAGSPVHRTIRFWDLEKFHVVSCIEE 229
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
PV C+ F DG + G D+ RV+ RC
Sbjct: 230 EATPVRCILFNPDGCCLYGGFQDSL-RVYGWEPERC 264
Score = 210 (79.0 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 59/213 (27%), Positives = 93/213 (43%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-PFRV 245
+Q H NV ++ S G + LA+ D V +WS++K + +L GH P
Sbjct: 13 LQEIVAHSSNVSSLVLGK--STGRL--LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIES 68
Query: 246 SRIKFHPSGRFLGTCCWD-HSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 302
+I G+ W L+ L L GH+ + + FHP G F+ + D
Sbjct: 69 LQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKA-NICSLDFHPYGSFVASGSLDT 127
Query: 303 SWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
+LWD+ + + + H + V C+ F DG +A+ D ++WDL G+ + G
Sbjct: 128 DIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTG 187
Query: 363 HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
H V V+F P Y LA ++ WDL K
Sbjct: 188 HYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEK 220
Score = 194 (73.4 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 58/221 (26%), Positives = 99/221 (44%)
Query: 178 LWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL 237
+W+V + V + GH + +++ E + +A +Q GS+++W L+ L L
Sbjct: 47 VWSVNKPNCVMSLTGHTTPIESLQISA--KEELI--VAG-SQSGSIRVWDLEAAKILRTL 101
Query: 238 EGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPFRVSRIKFHPSG 292
GH+ + + FHP G F+ + D W R + + H V ++F P G
Sbjct: 102 LGHKA-NICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQ-AVRCLRFSPDG 159
Query: 293 RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
++L + DH+ +LWDL G+ + GH PV + F +A + R WDL
Sbjct: 160 KWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLE 219
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA-VKIWD 392
+ +E V + F+PDG L G +D+ V W+
Sbjct: 220 KFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWE 260
Score = 183 (69.5 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 45/152 (29%), Positives = 76/152 (50%)
Query: 253 SGRFLGTC---CWDHSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
+GR L T C + W ++ P + +L GH + ++ + S R+W
Sbjct: 32 TGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTT-PIESLQISAKEELIVAGSQSGSIRVW 90
Query: 308 DLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSV 367
DL + + GH + + F GS VA+G LD ++WD+R CI + H ++V
Sbjct: 91 DLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAV 150
Query: 368 FSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
+ FSPDG LA+ ++D+ VK+WDL +++
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKVM 182
Score = 120 (47.3 bits), Expect = 0.00062, P = 0.00062
Identities = 25/82 (30%), Positives = 42/82 (51%)
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
G ++ATGG D VW + C+M L GH + S+ S + GS+ ++++WDL
Sbjct: 33 GRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL 92
Query: 394 RKRRLLKWCTQLLPNSIGVTSL 415
++L+ LL + + SL
Sbjct: 93 EAAKILR---TLLGHKANICSL 111
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 203 (76.5 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 61/224 (27%), Positives = 99/224 (44%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL---EGHEP 242
L T +GH + + +HP +G S ASC +D ++++WSL +T +GH+
Sbjct: 6 LEHTLQGHKGRIWGVAWHP---KGN--SFASCGEDKAIRIWSLSGNTWTTKTILSDGHKR 60
Query: 243 FRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC 299
+ +++ P G +L + +D + W A LEGHE V + + SG L TC
Sbjct: 61 -TIREVRWSPCGEYLASASFDATTAIWSKHECTATLEGHEN-EVKSVSWSRSGGLLATCS 118
Query: 300 WDHSWRLWDLNQGQE---VLHQEGHGKPVYCMSFQGDGSVVATGGLD---------AFGR 347
D S +W++ E H + V + + ++A+ D A
Sbjct: 119 RDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKMYAESALDS 178
Query: 348 VWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
WD C L H +V+S+DF DG L + S+D +KIW
Sbjct: 179 DWD-----CTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIW 217
Score = 151 (58.2 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ---EVLHQEGHGKPVYCMSFQ 331
L+GH+ R+ + +HP G +C D + R+W L+ + + +GH + + + +
Sbjct: 10 LQGHKG-RIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWS 68
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
G +A+ DA +W C LEGH V SV +S G LAT S D +V IW
Sbjct: 69 PCGEYLASASFDATTAIWSKH--ECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIW 126
Query: 392 DL 393
++
Sbjct: 127 EV 128
Score = 134 (52.2 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 46/170 (27%), Positives = 77/170 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G R I +SP +++A+AS+ +W+ EC T GH+ V ++ + G
Sbjct: 57 GHKRTIREVRWSPCGEYLASASFDATTAIWSKHEC--TATLEGHENEVKSVSWS---RSG 111
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPL---ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 266
+ LA+C++D SV +W + D A L H V R+ +HP+ L + +D++
Sbjct: 112 GL--LATCSRDKSVWIWEVAGDDEFECAAVLNAHSQ-DVKRVVWHPTKEILASASYDNTI 168
Query: 267 R------LDTP---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
+ LD+ A L H V I F G L +C D + ++W
Sbjct: 169 KMYAESALDSDWDCTATLSSHTS-TVWSIDFDADGERLVSCSDDATLKIW 217
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 203 (76.5 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 61/241 (25%), Positives = 110/241 (45%)
Query: 167 VATASWSGLCKLWTVPE---CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSV 223
+ T L K+W + E +L +GH V ++ + S+G ++AS + D ++
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVA---VSSDGQ--TIASSSLDSTM 109
Query: 224 KLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLAN--LEGH 278
LW + +L P + ++F P +++ + D + ++T A L+
Sbjct: 110 CLWDA-RSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQ 168
Query: 279 EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVA 338
I + P G+++ + D ++D+ G+ V EGH PV + F + ++
Sbjct: 169 NGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLL 228
Query: 339 TGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
T D +++D+ + L GH V V FS DG H A+ S DN+VKIWD +R+
Sbjct: 229 TASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKC 288
Query: 399 L 399
L
Sbjct: 289 L 289
Score = 177 (67.4 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 54/236 (22%), Positives = 98/236 (41%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
S D Q +A++S LW + ++ ++F P ++ + L D
Sbjct: 94 SSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPC-NKYVISGL----ND 148
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTP----LANL 275
G + ++S++ L+ I + P G+++ + D + D + L
Sbjct: 149 GKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTL 208
Query: 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS 335
EGH V + F P+ + L T D +L+D+ V GH V C++F DG
Sbjct: 209 EGHA-MPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGK 267
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
A+ D ++WD +C+ H V+ V +SP +A+ SED ++ I+
Sbjct: 268 HFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 208 (78.3 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 42/140 (30%), Positives = 77/140 (55%)
Query: 257 LGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQ 311
L +C D++ WR + + + GH+ V+ +K+ P + + + +D S RLW +
Sbjct: 348 LVSCSDDNTLYLWRNNQNKCVERMTGHQNV-VNDVKYSPDVKLIASASFDKSVRLWRASD 406
Query: 312 GQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
GQ + GH + VY +++ D ++ +G D+ +VW ++T + L GH VF VD
Sbjct: 407 GQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVD 466
Query: 372 FSPDGYHLATGSEDNAVKIW 391
++PDG +A+G +D +K+W
Sbjct: 467 WAPDGSRVASGGKDKVIKLW 486
Score = 184 (69.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 59/243 (24%), Positives = 113/243 (46%)
Query: 162 PDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDG 221
P+ + +A+AS G C++W V + + GH V A+ + G + + ++D
Sbjct: 219 PECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRW------GGAGLIYTSSKDR 272
Query: 222 SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLE-GHEP 280
+VK+W GH + V+ I + L T + H + D ++L E
Sbjct: 273 TVKMWRAADGILCRTFSGHAHW-VNNIALS-TDYVLRTGPF-HPVK-DRSKSHLSLSTEE 328
Query: 281 FRVSRIKFH----PSG-RFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGS 335
+ S +K + P L +C D++ LW NQ + V GH V + + D
Sbjct: 329 LQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVK 388
Query: 336 VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
++A+ D R+W G+ + GH+++V++V +S D + +GS+D+ +K+W ++
Sbjct: 389 LIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQT 448
Query: 396 RRL 398
++L
Sbjct: 449 KKL 451
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 62/232 (26%), Positives = 100/232 (43%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
S D+++V + P + GH V ++ F P +GA LAS + D
Sbjct: 86 SVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSP---DGA--HLASGSGD 140
Query: 221 GSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLAN--- 274
+V+LW L+ +TP GH+ + V + + P G+ L + C S W +T
Sbjct: 141 TTVRLWDLNTETPHFTCTGHKQW-VLCVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRP 199
Query: 275 LEGHEPFR--VSRIKFH--PSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSF 330
L GH+ ++ +H P R L + D R+WD+ GQ +++ GH V + +
Sbjct: 200 LSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRW 259
Query: 331 QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
G G ++ T D ++W G GH V ++ S D Y L TG
Sbjct: 260 GGAG-LIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTD-YVLRTG 309
Score = 137 (53.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 42/130 (32%), Positives = 62/130 (47%)
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
+++ GH VS + F P G L + D + RLWDLN GH + V C+S+
Sbjct: 113 SSMPGHAEAVVS-LNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAP 171
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCI-MFLEGHLKSVFSVDFSPDGYH-------LATGSE 384
DG +A+G +WD TG+ L GH K + + + P YH LA+ S
Sbjct: 172 DGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEP--YHRDPECRKLASASG 229
Query: 385 DNAVKIWDLR 394
D +IWD++
Sbjct: 230 DGDCRIWDVK 239
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 355 RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
RC + GH ++V S++FSPDG HLA+GS D V++WDL CT
Sbjct: 110 RCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCT 158
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 203 (76.5 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 50/131 (38%), Positives = 70/131 (53%)
Query: 266 WRLDTPLA--NLEGHEPFRVSRIKFHPSGRF-LGTCCWDHSWRLWDLNQ-GQEVLHQEGH 321
W + T L NL GH+ V + F PSG L + D + R+WDLN+ G+++ GH
Sbjct: 138 WEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGH 196
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ VYC S D S++ + + +W +R+ I LEGH SV S DFSPD L T
Sbjct: 197 LQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVT 256
Query: 382 GSEDNAVKIWD 392
S D +V +WD
Sbjct: 257 ASYDTSVIMWD 267
Score = 155 (59.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 65/243 (26%), Positives = 100/243 (41%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+AT G K+W V L+ GH V + F P G++ L S ++D ++++W
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTP---SGSLI-LVSASRDKTLRIW 181
Query: 227 SLDKD-TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEP 280
L+K + L GH + V P L + + S W R T + LEGH+
Sbjct: 182 DLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 240
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV--LHQ----------EGHGKPVYCM 328
VS F P L T +D S +WD G+ + LH + H + +
Sbjct: 241 SVVS-CDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEPTMDDSDVHMSSLRSV 299
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F +G +AT D R+W L + F + + F P G +ATG+ D V
Sbjct: 300 CFSPEGLYLATVADDRLLRIWALELKAPVAFAP--MTNGLCCTFFPHGGIIATGTRDGHV 357
Query: 389 KIW 391
+ W
Sbjct: 358 QFW 360
Score = 140 (54.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVV-ATGGLDAFGRVWDL-R 352
L T D ++W++ G +L+ GH V +SF GS++ + D R+WDL +
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 185
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
G+ I L GHL+ V+ SPD L + + + +V +W +R L++
Sbjct: 186 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIR 233
Score = 129 (50.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 43/159 (27%), Positives = 64/159 (40%)
Query: 203 HPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF-LGTCC 261
HP + + LA+ DG +K+W + L NL GH+ V + F PSG L +
Sbjct: 115 HPQAPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSAS 173
Query: 262 WDHS---WRLDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV 315
D + W L+ + L GH + V P L + + S LW + +
Sbjct: 174 RDKTLRIWDLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLI 232
Query: 316 LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
EGH V F D +++ T D +WD TG
Sbjct: 233 RKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTG 271
Score = 118 (46.6 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH + V P L + + S LW + + EGH V F D
Sbjct: 193 LSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDS 251
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFL------------EGHLKSVFSVDFSPDGYHLATG 382
+++ T D +WD TG + L + H+ S+ SV FSP+G +LAT
Sbjct: 252 ALLVTASYDTSVIMWDPYTGERLRSLHHTQLEPTMDDSDVHMSSLRSVCFSPEGLYLATV 311
Query: 383 SEDNAVKIWDL 393
++D ++IW L
Sbjct: 312 ADDRLLRIWAL 322
Score = 43 (20.2 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 15/64 (23%), Positives = 25/64 (39%)
Query: 148 QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTV---PECELVQTFRGHDCNVGAIEFHP 204
+ G+ P+ P H W C+ W+V P+ +GH C V + + P
Sbjct: 2 EAGE-EPLLLAELKPGRPH--QFDWKSSCETWSVAFSPDGSWFAWSQGH-CVVKLVPW-P 56
Query: 205 LPSE 208
L +
Sbjct: 57 LEEQ 60
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 203 (76.5 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 70/242 (28%), Positives = 111/242 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + ++ + L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG---TDSRL--LVSASQDGKLIIW----DSYTTNKVHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG F+ D+ + L T N L GH + +S +F + +
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQII 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ + GH V +S DG +G DA ++WD+R
Sbjct: 159 -TSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK-RRLLKWCTQLLPNSI-GVT 413
C GH + +V F P+GY TGS+D +++DLR + LL + N I G+T
Sbjct: 218 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHD---NIICGIT 274
Query: 414 SL 415
S+
Sbjct: 275 SV 276
Score = 199 (75.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D+Q + T+S C LW + + F GH +V ++ P +G
Sbjct: 141 GHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP---DG 196
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+C D S+KLW + GHE ++ + F P+G T D + RL
Sbjct: 197 RTFVSGAC--DASIKLWDVRDSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLF 253
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD +G GH
Sbjct: 254 DLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDN 313
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 168 (64.2 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 65/249 (26%), Positives = 103/249 (41%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P VA +C ++++ E V+ R GH + F L + S
Sbjct: 103 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITS 160
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS---WRLD 269
+ D + LW ++ GH V + P GR F+ C D S W +
Sbjct: 161 ----SGDTTCALWDIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVR 214
Query: 270 TPLANLE--GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GHE ++ + F P+G T D + RL+DL QE+L H + C
Sbjct: 215 DSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDN-IIC 271
Query: 328 ----MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
++F G ++ G D +WD G L GH V + + DG +ATGS
Sbjct: 272 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGS 331
Query: 384 EDNAVKIWD 392
D+ +KIW+
Sbjct: 332 WDSFLKIWN 340
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 211 VCSLASC-AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+CS+ S ++G+V++ ++ P GH + +S +F + + T D + W
Sbjct: 120 ICSIYSLKTREGNVRV---SRELP-----GHTGY-LSCCRFLDDNQII-TSSGDTTCALW 169
Query: 267 RLDT--PLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
++T GH V + P GR F+ C D S +LWD+ GH
Sbjct: 170 DIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVRDSMCRQTFIGHES 227
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR-CIMFLEGHLK-SVFSVDFSPDGYHLAT 381
+ ++F +G TG DA R++DLR + +M+ ++ + SV FS G L
Sbjct: 228 DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLA 287
Query: 382 GSEDNAVKIWDLRK 395
G +D IWD K
Sbjct: 288 GYDDFNCNIWDAMK 301
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 203 (76.5 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 70/242 (28%), Positives = 111/242 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + ++ + L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG---TDSRL--LVSASQDGKLIIW----DSYTTNKVHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG F+ D+ + L T N L GH + +S +F + +
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQII 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ + GH V +S DG +G DA ++WD+R
Sbjct: 159 -TSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK-RRLLKWCTQLLPNSI-GVT 413
C GH + +V F P+GY TGS+D +++DLR + LL + N I G+T
Sbjct: 218 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHD---NIICGIT 274
Query: 414 SL 415
S+
Sbjct: 275 SV 276
Score = 199 (75.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D+Q + T+S C LW + + F GH +V ++ P +G
Sbjct: 141 GHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP---DG 196
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+C D S+KLW + GHE ++ + F P+G T D + RL
Sbjct: 197 RTFVSGAC--DASIKLWDVRDSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLF 253
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD +G GH
Sbjct: 254 DLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDN 313
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 168 (64.2 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 65/249 (26%), Positives = 103/249 (41%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P VA +C ++++ E V+ R GH + F L + S
Sbjct: 103 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITS 160
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS---WRLD 269
+ D + LW ++ GH V + P GR F+ C D S W +
Sbjct: 161 ----SGDTTCALWDIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVR 214
Query: 270 TPLANLE--GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GHE ++ + F P+G T D + RL+DL QE+L H + C
Sbjct: 215 DSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDN-IIC 271
Query: 328 ----MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
++F G ++ G D +WD G L GH V + + DG +ATGS
Sbjct: 272 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGS 331
Query: 384 EDNAVKIWD 392
D+ +KIW+
Sbjct: 332 WDSFLKIWN 340
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 211 VCSLASC-AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+CS+ S ++G+V++ ++ P GH + +S +F + + T D + W
Sbjct: 120 ICSIYSLKTREGNVRV---SRELP-----GHTGY-LSCCRFLDDNQII-TSSGDTTCALW 169
Query: 267 RLDT--PLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
++T GH V + P GR F+ C D S +LWD+ GH
Sbjct: 170 DIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVRDSMCRQTFIGHES 227
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR-CIMFLEGHLK-SVFSVDFSPDGYHLAT 381
+ ++F +G TG DA R++DLR + +M+ ++ + SV FS G L
Sbjct: 228 DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLA 287
Query: 382 GSEDNAVKIWDLRK 395
G +D IWD K
Sbjct: 288 GYDDFNCNIWDAMK 301
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 203 (76.5 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 70/242 (28%), Positives = 111/242 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + ++ + L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG---TDSRL--LVSASQDGKLIIW----DSYTTNKVHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG F+ D+ + L T N L GH + +S +F + +
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQII 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ + GH V +S DG +G DA ++WD+R
Sbjct: 159 -TSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK-RRLLKWCTQLLPNSI-GVT 413
C GH + +V F P+GY TGS+D +++DLR + LL + N I G+T
Sbjct: 218 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHD---NIICGIT 274
Query: 414 SL 415
S+
Sbjct: 275 SV 276
Score = 199 (75.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D+Q + T+S C LW + + F GH +V ++ P +G
Sbjct: 141 GHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP---DG 196
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+C D S+KLW + GHE ++ + F P+G T D + RL
Sbjct: 197 RTFVSGAC--DASIKLWDVRDSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLF 253
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD +G GH
Sbjct: 254 DLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDN 313
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 168 (64.2 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 65/249 (26%), Positives = 103/249 (41%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P VA +C ++++ E V+ R GH + F L + S
Sbjct: 103 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITS 160
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS---WRLD 269
+ D + LW ++ GH V + P GR F+ C D S W +
Sbjct: 161 ----SGDTTCALWDIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVR 214
Query: 270 TPLANLE--GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GHE ++ + F P+G T D + RL+DL QE+L H + C
Sbjct: 215 DSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDN-IIC 271
Query: 328 ----MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
++F G ++ G D +WD G L GH V + + DG +ATGS
Sbjct: 272 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGS 331
Query: 384 EDNAVKIWD 392
D+ +KIW+
Sbjct: 332 WDSFLKIWN 340
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 211 VCSLASC-AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+CS+ S ++G+V++ ++ P GH + +S +F + + T D + W
Sbjct: 120 ICSIYSLKTREGNVRV---SRELP-----GHTGY-LSCCRFLDDNQII-TSSGDTTCALW 169
Query: 267 RLDT--PLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
++T GH V + P GR F+ C D S +LWD+ GH
Sbjct: 170 DIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVRDSMCRQTFIGHES 227
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR-CIMFLEGHLK-SVFSVDFSPDGYHLAT 381
+ ++F +G TG DA R++DLR + +M+ ++ + SV FS G L
Sbjct: 228 DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLA 287
Query: 382 GSEDNAVKIWDLRK 395
G +D IWD K
Sbjct: 288 GYDDFNCNIWDAMK 301
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 203 (76.5 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 70/242 (28%), Positives = 111/242 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + ++ + L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG---TDSRL--LVSASQDGKLIIW----DSYTTNKVHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG F+ D+ + L T N L GH + +S +F + +
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQII 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ + GH V +S DG +G DA ++WD+R
Sbjct: 159 -TSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK-RRLLKWCTQLLPNSI-GVT 413
C GH + +V F P+GY TGS+D +++DLR + LL + N I G+T
Sbjct: 218 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHD---NIICGIT 274
Query: 414 SL 415
S+
Sbjct: 275 SV 276
Score = 199 (75.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D+Q + T+S C LW + + F GH +V ++ P +G
Sbjct: 141 GHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP---DG 196
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+C D S+KLW + GHE ++ + F P+G T D + RL
Sbjct: 197 RTFVSGAC--DASIKLWDVRDSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLF 253
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD +G GH
Sbjct: 254 DLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDN 313
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 168 (64.2 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 65/249 (26%), Positives = 103/249 (41%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P VA +C ++++ E V+ R GH + F L + S
Sbjct: 103 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITS 160
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS---WRLD 269
+ D + LW ++ GH V + P GR F+ C D S W +
Sbjct: 161 ----SGDTTCALWDIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVR 214
Query: 270 TPLANLE--GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GHE ++ + F P+G T D + RL+DL QE+L H + C
Sbjct: 215 DSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDN-IIC 271
Query: 328 ----MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
++F G ++ G D +WD G L GH V + + DG +ATGS
Sbjct: 272 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGS 331
Query: 384 EDNAVKIWD 392
D+ +KIW+
Sbjct: 332 WDSFLKIWN 340
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 211 VCSLASC-AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+CS+ S ++G+V++ ++ P GH + +S +F + + T D + W
Sbjct: 120 ICSIYSLKTREGNVRV---SRELP-----GHTGY-LSCCRFLDDNQII-TSSGDTTCALW 169
Query: 267 RLDT--PLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
++T GH V + P GR F+ C D S +LWD+ GH
Sbjct: 170 DIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVRDSMCRQTFIGHES 227
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR-CIMFLEGHLK-SVFSVDFSPDGYHLAT 381
+ ++F +G TG DA R++DLR + +M+ ++ + SV FS G L
Sbjct: 228 DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLA 287
Query: 382 GSEDNAVKIWDLRK 395
G +D IWD K
Sbjct: 288 GYDDFNCNIWDAMK 301
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 203 (76.5 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 70/242 (28%), Positives = 111/242 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + ++ + L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG---TDSRL--LVSASQDGKLIIW----DSYTTNKVHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG F+ D+ + L T N L GH + +S +F + +
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQII 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ + GH V +S DG +G DA ++WD+R
Sbjct: 159 -TSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK-RRLLKWCTQLLPNSI-GVT 413
C GH + +V F P+GY TGS+D +++DLR + LL + N I G+T
Sbjct: 218 CRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHD---NIICGIT 274
Query: 414 SL 415
S+
Sbjct: 275 SV 276
Score = 199 (75.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D+Q + T+S C LW + + F GH +V ++ P +G
Sbjct: 141 GHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAP---DG 196
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+C D S+KLW + GHE ++ + F P+G T D + RL
Sbjct: 197 RTFVSGAC--DASIKLWDVRDSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLF 253
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD +G GH
Sbjct: 254 DLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDN 313
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 168 (64.2 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 65/249 (26%), Positives = 103/249 (41%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P VA +C ++++ E V+ R GH + F L + S
Sbjct: 103 CAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF--LDDNQIITS 160
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS---WRLD 269
+ D + LW ++ GH V + P GR F+ C D S W +
Sbjct: 161 ----SGDTTCALWDIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVR 214
Query: 270 TPLANLE--GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GHE ++ + F P+G T D + RL+DL QE+L H + C
Sbjct: 215 DSMCRQTFIGHES-DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELL-MYSHDN-IIC 271
Query: 328 ----MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGS 383
++F G ++ G D +WD G L GH V + + DG +ATGS
Sbjct: 272 GITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGS 331
Query: 384 EDNAVKIWD 392
D+ +KIW+
Sbjct: 332 WDSFLKIWN 340
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 211 VCSLASC-AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+CS+ S ++G+V++ ++ P GH + +S +F + + T D + W
Sbjct: 120 ICSIYSLKTREGNVRV---SRELP-----GHTGY-LSCCRFLDDNQII-TSSGDTTCALW 169
Query: 267 RLDT--PLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
++T GH V + P GR F+ C D S +LWD+ GH
Sbjct: 170 DIETGQQTVGFAGHSG-DVMSLSLAPDGRTFVSGAC-DASIKLWDVRDSMCRQTFIGHES 227
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR-CIMFLEGHLK-SVFSVDFSPDGYHLAT 381
+ ++F +G TG DA R++DLR + +M+ ++ + SV FS G L
Sbjct: 228 DINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLA 287
Query: 382 GSEDNAVKIWDLRK 395
G +D IWD K
Sbjct: 288 GYDDFNCNIWDAMK 301
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 203 (76.5 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 61/211 (28%), Positives = 95/211 (45%)
Query: 146 CSQVGD-TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
C ++ T +S C F D Q + T+S C LW V + F H+ +V ++ P
Sbjct: 143 CRELNSHTGYLSCCRFLNDRQ-IVTSSGDMTCILWDVENGTKITEFSDHNGDVMSVSVSP 201
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
+ S +C D + KLW L + GHE ++ +++ P+G GT D
Sbjct: 202 --DKNYFIS-GAC--DATAKLWDLRSGKCVQTFTGHEA-DINAVQYFPNGLSFGTGSDDA 255
Query: 265 SWRLDTPLANLE----GHEPFR--VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
S RL A+ E H+ ++ + F SGRFL D + +WD +G+ VL
Sbjct: 256 SCRLFDIRADRELMQYTHDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTLKGERVLSL 315
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVW 349
GHG V C+ DG + TG D+ ++W
Sbjct: 316 TGHGNRVSCLGVPTDGMALCTGSWDSLLKIW 346
Score = 191 (72.3 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 67/243 (27%), Positives = 108/243 (44%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+ +GH + A+ + +E V L S +QDG + +W D N P R S
Sbjct: 56 RNLKGHLAKIYAMHW----AEDNV-HLVSASQDGKLLVW----DGLTTNKVHAIPLRSSW 106
Query: 248 IK---FHPSGRFLGTCCWDHSWRLDTPLANLEGHE-PFRVSR-IKFHPSG----RFLG-- 296
+ + P+ F+ D+ + NL E P RV R + H RFL
Sbjct: 107 VMTCAYSPTANFVACGGLDNI----CSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDR 162
Query: 297 ---TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT 353
T D + LWD+ G ++ H V +S D + +G DA ++WDLR+
Sbjct: 163 QIVTSSGDMTCILWDVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRS 222
Query: 354 GRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI-GV 412
G+C+ GH + +V + P+G TGS+D + +++D+R R L T N + G+
Sbjct: 223 GKCVQTFTGHEADINAVQYFPNGLSFGTGSDDASCRLFDIRADRELMQYTH--DNILCGI 280
Query: 413 TSL 415
TS+
Sbjct: 281 TSV 283
Score = 172 (65.6 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 59/246 (23%), Positives = 102/246 (41%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECEL-VQTFRGHDCNVGAIEFHPLPSEGAVCSLAS 216
C++SP + VA +C ++ + E ++ R + + G + ++ + + +
Sbjct: 110 CAYSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQIVTSSG 169
Query: 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL--GTC-----CWDHSWRLD 269
D + LW ++ T + H V + P + G C WD R
Sbjct: 170 ---DMTCILWDVENGTKITEFSDHNG-DVMSVSVSPDKNYFISGACDATAKLWD--LRSG 223
Query: 270 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC-- 327
+ GHE ++ +++ P+G GT D S RL+D+ +E++ Q H + C
Sbjct: 224 KCVQTFTGHEA-DINAVQYFPNGLSFGTGSDDASCRLFDIRADRELM-QYTHDN-ILCGI 280
Query: 328 --MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
+ F G + G D VWD G ++ L GH V + DG L TGS D
Sbjct: 281 TSVGFSFSGRFLFAGYDDFTCNVWDTLKGERVLSLTGHGNRVSCLGVPTDGMALCTGSWD 340
Query: 386 NAVKIW 391
+ +KIW
Sbjct: 341 SLLKIW 346
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 71/261 (27%), Positives = 108/261 (41%)
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAV-CSLASCA 218
++ D+ H+ +AS G +W + + T + H AI PL S + C+ + A
Sbjct: 70 WAEDNVHLVSASQDGKLLVW-----DGLTTNKVH-----AI---PLRSSWVMTCAYSPTA 116
Query: 219 QDGSVKLWSLDKDTPLANLEGHE-PFRVSR-IKFHPSG----RFLG-----TCCWDHS-- 265
V LD + NL E P RV R + H RFL T D +
Sbjct: 117 N--FVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQIVTSSGDMTCI 174
Query: 266 -WRLD--TPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
W ++ T + H V + P F+ C D + +LWDL G+ V GH
Sbjct: 175 LWDVENGTKITEFSDHNG-DVMSVSVSPDKNYFISGAC-DATAKLWDLRSGKCVQTFTGH 232
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL--EGHLKSVFSVDFSPDGYHL 379
+ + + +G TG DA R++D+R R +M + L + SV FS G L
Sbjct: 233 EADINAVQYFPNGLSFGTGSDDASCRLFDIRADRELMQYTHDNILCGITSVGFSFSGRFL 292
Query: 380 ATGSEDNAVKIWD-LRKRRLL 399
G +D +WD L+ R+L
Sbjct: 293 FAGYDDFTCNVWDTLKGERVL 313
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 202 (76.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 57/149 (38%), Positives = 77/149 (51%)
Query: 266 WRLDTPLA--NLEGHEPFRVSRIKFHPSGRF-LGTCCWDHSWRLWDLNQ-GQEVLHQEGH 321
W + T L NL GH+ V + F PSG L + D + R+WDLN+ G+++ GH
Sbjct: 140 WEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGH 198
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ VYC S D S++ + + +W +R+ I LEGH SV S DFSPD L T
Sbjct: 199 LQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVT 258
Query: 382 GSEDNAVKIWDL---RKRRLLKWCTQLLP 407
S D V +WD + RLL TQL P
Sbjct: 259 ASYDTNVIMWDPYTGERLRLLHH-TQLDP 286
Score = 152 (58.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 67/243 (27%), Positives = 100/243 (41%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+AT G K+W V L+ GH V + F P G++ L S ++D ++++W
Sbjct: 128 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTP---SGSLI-LVSASRDKTLRIW 183
Query: 227 SLDKD-TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEP 280
L+K + L GH + V P L + + S W R T + LEGH+
Sbjct: 184 DLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 242
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV--LHQEGHGKP-----VYCMS---- 329
VS F P L T +D + +WD G+ + LH P V+ S
Sbjct: 243 SVVS-CDFSPDSALLVTASYDTNVIMWDPYTGERLRLLHHTQLDPPMDDSDVHISSLRSV 301
Query: 330 -FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F +G +AT D R+W L I F + + F P G +ATG+ D V
Sbjct: 302 CFSPEGLYLATVADDRLLRIWALELKTPIAFAP--MTNGLCCTFFPHGGVIATGTRDGHV 359
Query: 389 KIW 391
+ W
Sbjct: 360 QFW 362
Score = 128 (50.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 44/165 (26%), Positives = 66/165 (40%)
Query: 203 HPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF-LGTCC 261
HP + + LA+ DG +K+W + L NL GH+ V + F PSG L +
Sbjct: 117 HPQVPDISCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSAS 175
Query: 262 WDHS---WRLDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV 315
D + W L+ + L GH + V P L + + S LW + +
Sbjct: 176 RDKTLRIWDLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLI 234
Query: 316 LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
EGH V F D +++ T D +WD TG + L
Sbjct: 235 RKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRLL 279
Score = 119 (46.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH + V P L + + S LW + + EGH V F D
Sbjct: 195 LSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDS 253
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFL------------EGHLKSVFSVDFSPDGYHLATG 382
+++ T D +WD TG + L + H+ S+ SV FSP+G +LAT
Sbjct: 254 ALLVTASYDTNVIMWDPYTGERLRLLHHTQLDPPMDDSDVHISSLRSVCFSPEGLYLATV 313
Query: 383 SEDNAVKIWDL 393
++D ++IW L
Sbjct: 314 ADDRLLRIWAL 324
Score = 43 (20.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 15/58 (25%), Positives = 22/58 (37%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTV---PECELVQTFRGHDCNVGAIEFHPLPSE 208
P+ P H W C+ W+V P+ +GH C V I + PL +
Sbjct: 9 PLLLAELKPGRPH--QFDWKSSCETWSVAFSPDGSWFAWSQGH-CIVKLIPW-PLEEQ 62
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 209 (78.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 61/214 (28%), Positives = 97/214 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T PI S + + S SG ++W + ++++T GH N+ +++FHP S
Sbjct: 60 GHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS-- 117
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W 266
+AS + D +KLW + + + + H V ++F P G++L + DH+ W
Sbjct: 118 ---FVASGSLDTDIKLWDVRRKGCIFKYKSHTQ-AVRCLRFSPDGKWLASAADDHTVKLW 173
Query: 267 RLDTPLANLE--GHE-PFRVSRIKFHPSGRFL-GTCCWDHSWRLWDLNQGQEVLHQEGHG 322
L E GH P V ++FHPS +L + + R WDL + V E
Sbjct: 174 DLTAGKVMFEFTGHYGPVNV--VEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEA 231
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
PV C+ F DG + G D+ RV+ RC
Sbjct: 232 TPVRCILFNPDGCCLYGGFQDSL-RVYGWEPERC 264
Score = 192 (72.6 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 60/216 (27%), Positives = 96/216 (44%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWS---LDKDTPLANLEGHEPF 243
+Q H NV ++ S G + LA+ D V +WS L D + E
Sbjct: 13 LQEIVAHSSNVSSLVLGK--STGRL--LATGGDDCRVNVWSVAQLRHDLLTGHTTPIESL 68
Query: 244 RVS-RIKFHPSGRFLGTCCWDHSWRLDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCW 300
++S + + +G G+ W L+ L L GH+ + + FHP G F+ +
Sbjct: 69 QISAKEELIVAGSQSGSI---RVWDLEAAKILRTLLGHKA-NICSLDFHPYGSFVASGSL 124
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL 360
D +LWD+ + + + H + V C+ F DG +A+ D ++WDL G+ +
Sbjct: 125 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEF 184
Query: 361 EGHLKSVFSVDFSPD-GYHLATGSEDNAVKIWDLRK 395
GH V V+F P Y LA+GS ++ WDL K
Sbjct: 185 TGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEK 220
Score = 188 (71.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 52/182 (28%), Positives = 84/182 (46%)
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPL 272
+Q GS+++W L+ L L GH+ + + FHP G F+ + D W R +
Sbjct: 81 SQSGSIRVWDLEAAKILRTLLGHKA-NICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCI 139
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG 332
+ H V ++F P G++L + DH+ +LWDL G+ + GH PV + F
Sbjct: 140 FKYKSHTQ-AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHP 198
Query: 333 DGS-VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA-VKI 390
++A+G R WDL + +E V + F+PDG L G +D+ V
Sbjct: 199 SIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYG 258
Query: 391 WD 392
W+
Sbjct: 259 WE 260
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 35/97 (36%), Positives = 56/97 (57%)
Query: 303 SWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
S R+WDL + + GH + + F GS VA+G LD ++WD+R CI +
Sbjct: 85 SIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS 144
Query: 363 HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
H ++V + FSPDG LA+ ++D+ VK+WDL +++
Sbjct: 145 HTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVM 181
Score = 153 (58.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 265 SWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+W+L +A H S + +GR L T D +W + Q + L GH P
Sbjct: 10 AWKLQEIVA----HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVAQLRHDL-LTGHTTP 64
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
+ + ++ G RVWDL + + L GH ++ S+DF P G +A+GS
Sbjct: 65 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 124
Query: 385 DNAVKIWDLRKR 396
D +K+WD+R++
Sbjct: 125 DTDIKLWDVRRK 136
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 210 (79.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 71/276 (25%), Positives = 121/276 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWT------VPECELVQTFRGHDCNVGAIEFH 203
G T + S D +AT + +LW V +C + F GH +V A+
Sbjct: 362 GHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKC--IHVFTGHTASVTAVALG 419
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKD---TPLAN-----LEGHEPFRVSRIKFHPSGR 255
PL G LAS +QD ++K ++L + +N ++ H+ V+ I+ GR
Sbjct: 420 PLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDR-DVNAIQVSKDGR 478
Query: 256 FLGTCCWDHSWRL-DTPLAN----LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLN 310
+ + D + +L D+ L GH V F+P R L + D + R+W+++
Sbjct: 479 IIASASQDKTIKLWDSSTGEVVGVLRGHRR-GVWACSFNPFSRQLASGSGDRTIRIWNVD 537
Query: 311 QGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV 370
Q V EGH + + + G+ V + D +VW L +G C+ L+ H V+++
Sbjct: 538 TQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWAL 597
Query: 371 DFSPDGYHLATGSEDNAVKIW-DLRKRRLLKWCTQL 405
DG L +G D V +W D+ + + K +L
Sbjct: 598 ASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEEL 633
Score = 161 (61.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 38/132 (28%), Positives = 67/132 (50%)
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSF 330
+ +++ HE V + P+ L T + ++WD+ G V H GHG + + F
Sbjct: 96 IKSMKAHET-PVITMTIDPTNTLLATGGAEGLVKVWDI-AGAYVTHSFRGHGGVISALCF 153
Query: 331 QGDGS--VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
+ V+A+G D+ R+WDL + R + EGH + + F P G L +GS D V
Sbjct: 154 GKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTV 213
Query: 389 KIWDLRKRRLLK 400
++W+++KR ++
Sbjct: 214 QVWNIKKRSAVR 225
Score = 131 (51.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 32/104 (30%), Positives = 49/104 (47%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P+ + P + +AT GL K+W + + +FRGH + A+ F +
Sbjct: 105 PVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWV--- 161
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL 257
LAS A D V+LW L+ +A EGH + + F P+G FL
Sbjct: 162 LASGADDSRVRLWDLNSSRSMAVFEGHSSV-IRGLTFEPTGSFL 204
Score = 122 (48.0 bits), Expect = 0.00047, P = 0.00047
Identities = 24/94 (25%), Positives = 49/94 (52%)
Query: 306 LWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365
++++ G+ + + H PV M+ +++ATGG + +VWD+ GH
Sbjct: 87 IYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGG 146
Query: 366 SVFSVDFSP--DGYHLATGSEDNAVKIWDLRKRR 397
+ ++ F + + LA+G++D+ V++WDL R
Sbjct: 147 VISALCFGKHQNTWVLASGADDSRVRLWDLNSSR 180
Score = 98 (39.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
LEGH V ++D S DG LATG++DN V++W+L
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNL 393
Score = 95 (38.5 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 29/84 (34%), Positives = 41/84 (48%)
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG----RCIMFLEGHLKSVFSVDFSP 374
EGH V + DG +ATG D R+W+L +CI GH SV +V P
Sbjct: 361 EGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGP 420
Query: 375 ---DGY--HLATGSEDNAVKIWDL 393
+GY LA+ S+D +K ++L
Sbjct: 421 LDVNGYPTFLASSSQDRTLKRFNL 444
Score = 95 (38.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 43/209 (20%), Positives = 90/209 (43%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSL 214
++ + + DS+ + A S L ++ +P +++ + H+ V + P + L
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNT-----LL 118
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKF--HPSGRFLGTCCWDHS---WRLD 269
A+ +G VK+W + + GH +S + F H + L + D W L+
Sbjct: 119 ATGGAEGLVKVWDIAGAYVTHSFRGHGGV-ISALCFGKHQNTWVLASGADDSRVRLWDLN 177
Query: 270 TP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH-QEGHG-KPV 325
+ +A EGH + + F P+G FL + D + ++W++ + V H + +
Sbjct: 178 SSRSMAVFEGHSSV-IRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAI 236
Query: 326 YCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
++ Q + ++ T G WD ++G
Sbjct: 237 GWVNGQPEEKILYTAGEGNLILAWDWKSG 265
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 207 (77.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 39/121 (32%), Positives = 70/121 (57%)
Query: 271 PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSF 330
P+A + GH+ V+ + F P GR++ + +D+S +LWD G+ + GH VY +++
Sbjct: 394 PIARMTGHQKL-VNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAW 452
Query: 331 QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKI 390
D ++ + D +VWD+RT + + L GH V++VD+S DG + +G +D V++
Sbjct: 453 SSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRL 512
Query: 391 W 391
W
Sbjct: 513 W 513
Score = 196 (74.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 67/244 (27%), Positives = 115/244 (47%)
Query: 162 PDSQ-HVATASWSGLCKLW-TVPE-CELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
P S+ +A++S G K+W TV C+ T GH +V +++ G L S +
Sbjct: 245 PGSKPRLASSSKDGTIKIWDTVSRVCQY--TMSGHTNSVSCVKW------GGQGLLYSGS 296
Query: 219 QDGSVKLWSLDKDTPLAN-LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPL-ANL 275
D +V++W ++ N L+ H + V+ + + L +DH+ + TP A
Sbjct: 297 HDRTVRVWDINSQGRCINILKSHAHW-VNHLSLS-TDYALRIGAFDHTGKKPSTPEEAQK 354
Query: 276 EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWD-LNQGQEVLHQEGHGKPVYCMSFQGDG 334
+ E + K S + T D++ LW+ L + + GH K V ++F DG
Sbjct: 355 KALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDG 414
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ + D ++WD R G+ I GH+ SV+ V +S D L + S+D +K+WD+R
Sbjct: 415 RYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVR 474
Query: 395 KRRL 398
R+L
Sbjct: 475 TRKL 478
Score = 176 (67.0 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 64/252 (25%), Positives = 115/252 (45%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVP--ECELVQTFRGHDCNVGAIEFHP--LPSEGAVCSL 214
S+SPD + +AT S +LW +C L RGH + ++ + P L G+ L
Sbjct: 193 SWSPDGEVIATGSMDNTIRLWDPKSGQC-LGDALRGHSKWITSLSWEPIHLVKPGSKPRL 251
Query: 215 ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP 271
AS ++DG++K+W + GH VS +K+ G L + D + W +++
Sbjct: 252 ASSSKDGTIKIWDTVSRVCQYTMSGHTN-SVSCVKWGGQG-LLYSGSHDRTVRVWDINSQ 309
Query: 272 ---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+ L+ H + V+ + + L +DH+ + + + E + K C
Sbjct: 310 GRCINILKSHAHW-VNHLSLS-TDYALRIGAFDHTGKKPSTPEEAQKKALENYEK--ICK 365
Query: 329 SFQGDGSVVATGGLDAFGRVWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
++ T D +W+ L++ + I + GH K V V FSPDG ++ + S DN+
Sbjct: 366 KNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNS 425
Query: 388 VKIWDLRKRRLL 399
+K+WD R + +
Sbjct: 426 IKLWDGRDGKFI 437
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/117 (36%), Positives = 65/117 (55%)
Query: 289 HPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVATGGLDAFGR 347
H S R + T D++ R+WD + Q +H +GH V C+S+ DG V+ATG +D R
Sbjct: 154 HTSSRMV-TGAGDNTARIWDCDT-QTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIR 211
Query: 348 VWDLRTGRCIM-FLEGHLKSVFSVDFSP-----DGY--HLATGSEDNAVKIWDLRKR 396
+WD ++G+C+ L GH K + S+ + P G LA+ S+D +KIWD R
Sbjct: 212 LWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSR 268
Score = 167 (63.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 58/212 (27%), Positives = 91/212 (42%)
Query: 192 GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
GH + F P S V A D + ++W D TP+ L+GH + V + +
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTG----AGDNTARIWDCDTQTPMHTLKGHYNW-VLCVSWS 195
Query: 252 PSGRFLGTCCWDHSWRLDTPLAN------LEGHEPFRVSRIKFHP-------SGRFLGTC 298
P G + T D++ RL P + L GH + ++ + + P S L +
Sbjct: 196 PDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKW-ITSLSWEPIHLVKPGSKPRLASS 254
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT-GRCI 357
D + ++WD GH V C+ + G G ++ +G D RVWD+ + GRCI
Sbjct: 255 SKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRCI 313
Query: 358 MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVK 389
L+ H V + S D Y L G+ D+ K
Sbjct: 314 NILKSHAHWVNHLSLSTD-YALRIGAFDHTGK 344
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 39/124 (31%), Positives = 63/124 (50%)
Query: 320 GHGKPVYCMSFQGD-GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
GHG + C +F S + TG D R+WD T + L+GH V V +SPDG
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEV 200
Query: 379 LATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI-GVTSLLTDLYIDVLESLNPGIGNIISS 437
+ATGS DN +++WD + Q L +++ G + +T L + + + PG ++S
Sbjct: 201 IATGSMDNTIRLWDPKSG-------QCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLAS 253
Query: 438 ALKE 441
+ K+
Sbjct: 254 SSKD 257
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 28/103 (27%), Positives = 54/103 (52%)
Query: 139 LTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVG 198
L S G + +++ +FSPD +++ +AS+ KLW + + + TFRGH +V
Sbjct: 389 LKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVY 448
Query: 199 AIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE 241
+ + S+ + L SC++D ++K+W + +L GH+
Sbjct: 449 QVAWS---SDCRL--LVSCSKDTTLKVWDVRTRKLSVDLPGHK 486
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 200 (75.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 50/131 (38%), Positives = 69/131 (52%)
Query: 266 WRLDTPLA--NLEGHEPFRVSRIKFHPSGRF-LGTCCWDHSWRLWDLNQ-GQEVLHQEGH 321
W + T L NL GH+ V + F PSG L + D + R+WDLN+ G+++ GH
Sbjct: 138 WEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGH 196
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ VYC S D S++ + + +W +R+ I LEGH SV S DFSPD L T
Sbjct: 197 LQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVT 256
Query: 382 GSEDNAVKIWD 392
S D V +WD
Sbjct: 257 ASYDTNVIMWD 267
Score = 153 (58.9 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 67/243 (27%), Positives = 100/243 (41%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+AT G K+W V L+ GH V + F P G++ L S ++D ++++W
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTP---SGSLI-LVSASRDKTLRIW 181
Query: 227 SLDKD-TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEP 280
L+K + L GH + V P L + + S W R T + LEGH+
Sbjct: 182 DLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 240
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV--LHQEGHGKP-----VYCMS---- 329
VS F P L T +D + +WD G+ + LH P V+ S
Sbjct: 241 SVVS-CDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLSPPMDDSDVHISSLRSV 299
Query: 330 -FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F +G +AT D R+W L I F + + F P G +ATG+ D V
Sbjct: 300 CFSPEGLYLATVADDRLLRIWALELKTPIAFAP--MTNGLCCTFFPHGGVIATGTRDGHV 357
Query: 389 KIW 391
+ W
Sbjct: 358 QFW 360
Score = 140 (54.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVV-ATGGLDAFGRVWDL-R 352
L T D ++W++ G +L+ GH V +SF GS++ + D R+WDL +
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 185
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
G+ I L GHL+ V+ SPD L + + + +V +W +R L++
Sbjct: 186 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIR 233
Score = 127 (49.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 43/159 (27%), Positives = 64/159 (40%)
Query: 203 HPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF-LGTCC 261
HP + + LA+ DG +K+W + L NL GH+ V + F PSG L +
Sbjct: 115 HPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSAS 173
Query: 262 WDHS---WRLDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV 315
D + W L+ + L GH + V P L + + S LW + +
Sbjct: 174 RDKTLRIWDLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLI 232
Query: 316 LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
EGH V F D +++ T D +WD TG
Sbjct: 233 RKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTG 271
Score = 117 (46.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH + V P L + + S LW + + EGH V F D
Sbjct: 193 LSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDS 251
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFL------------EGHLKSVFSVDFSPDGYHLATG 382
+++ T D +WD TG + L + H+ S+ SV FSP+G +LAT
Sbjct: 252 ALLVTASYDTNVIMWDPYTGERLRSLHHTQLSPPMDDSDVHISSLRSVCFSPEGLYLATV 311
Query: 383 SEDNAVKIWDL 393
++D ++IW L
Sbjct: 312 ADDRLLRIWAL 322
Score = 44 (20.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 16/64 (25%), Positives = 25/64 (39%)
Query: 148 QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTV---PECELVQTFRGHDCNVGAIEFHP 204
+ G+ P+ P H W C+ W+V P+ +GH C V I + P
Sbjct: 2 EAGE-EPLLLAELKPGRPH--QFDWKSSCETWSVAFSPDGSWFAWSQGH-CIVKLIPW-P 56
Query: 205 LPSE 208
L +
Sbjct: 57 LEEQ 60
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 200 (75.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 50/131 (38%), Positives = 69/131 (52%)
Query: 266 WRLDTPLA--NLEGHEPFRVSRIKFHPSGRF-LGTCCWDHSWRLWDLNQ-GQEVLHQEGH 321
W + T L NL GH+ V + F PSG L + D + R+WDLN+ G+++ GH
Sbjct: 138 WEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGH 196
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ VYC S D S++ + + +W +R+ I LEGH SV S DFSPD L T
Sbjct: 197 LQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVT 256
Query: 382 GSEDNAVKIWD 392
S D V +WD
Sbjct: 257 ASYDTNVIMWD 267
Score = 152 (58.6 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 65/243 (26%), Positives = 100/243 (41%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+AT G K+W V L+ GH V + F P G++ L S ++D ++++W
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTP---SGSLI-LVSASRDKTLRIW 181
Query: 227 SLDKD-TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEP 280
L+K + L GH + V P L + + S W R T + LEGH+
Sbjct: 182 DLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 240
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV--LHQ----------EGHGKPVYCM 328
VS F P L T +D + +WD G+ + LH + H + +
Sbjct: 241 SVVS-CDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSV 299
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F +G +AT D R+W L I F + + F P G +ATG+ D V
Sbjct: 300 CFSPEGLYLATVADDRLLRIWALELKTPIAFAP--MTNGLCCTFFPHGGVIATGTRDGHV 357
Query: 389 KIW 391
+ W
Sbjct: 358 QFW 360
Score = 140 (54.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVV-ATGGLDAFGRVWDL-R 352
L T D ++W++ G +L+ GH V +SF GS++ + D R+WDL +
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 185
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
G+ I L GHL+ V+ SPD L + + + +V +W +R L++
Sbjct: 186 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIR 233
Score = 127 (49.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 43/159 (27%), Positives = 64/159 (40%)
Query: 203 HPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF-LGTCC 261
HP + + LA+ DG +K+W + L NL GH+ V + F PSG L +
Sbjct: 115 HPQVPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSAS 173
Query: 262 WDHS---WRLDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV 315
D + W L+ + L GH + V P L + + S LW + +
Sbjct: 174 RDKTLRIWDLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLI 232
Query: 316 LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
EGH V F D +++ T D +WD TG
Sbjct: 233 RKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTG 271
Score = 117 (46.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH + V P L + + S LW + + EGH V F D
Sbjct: 193 LSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDS 251
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFL------------EGHLKSVFSVDFSPDGYHLATG 382
+++ T D +WD TG + L + H+ S+ SV FSP+G +LAT
Sbjct: 252 ALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATV 311
Query: 383 SEDNAVKIWDL 393
++D ++IW L
Sbjct: 312 ADDRLLRIWAL 322
Score = 44 (20.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 16/64 (25%), Positives = 25/64 (39%)
Query: 148 QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTV---PECELVQTFRGHDCNVGAIEFHP 204
+ G+ P+ P H W C+ W+V P+ +GH C V I + P
Sbjct: 2 EAGE-EPLLLAELKPGRPH--QFDWKSSCETWSVAFSPDGSWFAWSQGH-CIVKLIPW-P 56
Query: 205 LPSE 208
L +
Sbjct: 57 LEEQ 60
>FB|FBgn0261119 [details] [associations]
symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS]
[GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 OMA:QWQELKV FlyBase:FBgn0261119
EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 SMR:Q7KLW9
IntAct:Q7KLW9 STRING:Q7KLW9 EnsemblMetazoa:FBtr0086723 GeneID:37123
KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9
GenomeRNAi:37123 NextBio:802060 Uniprot:Q7KLW9
Length = 505
Score = 206 (77.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 53/189 (28%), Positives = 96/189 (50%)
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLANL- 275
D + +++ D + +A L+GH +++++ +HP+ + T D + W + T L
Sbjct: 244 DKNATVFNKDTEQMVAILKGHTK-KITKVIYHPNEDTVITGSPDMNIRIWHVPTSQTQLL 302
Query: 276 -EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ---EVLHQEGHGKPVYCMSFQ 331
HE V+ + HP+G +L + D W D+ G+ +V+ G + F
Sbjct: 303 LRCHEG-PVTGLSLHPTGDYLLSTSSDKHWAFSDIRTGRLLTKVIDTAEVG--LTTAQFH 359
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
DG + TG +D+ ++WDL+ + GH + ++ FS +GY+LAT ++D VK+W
Sbjct: 360 PDGLIFGTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKLW 419
Query: 392 DLRKRRLLK 400
DLRK + K
Sbjct: 420 DLRKLKNFK 428
Score = 183 (69.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 57/224 (25%), Positives = 101/224 (45%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
++V +GH + + +HP +E V + + D ++++W + L HE
Sbjct: 256 QMVAILKGHTKKITKVIYHP--NEDTVIT---GSPDMNIRIWHVPTSQTQLLLRCHEG-P 309
Query: 245 VSRIKFHPSGRFLGTCCWDHSW-----RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC 299
V+ + HP+G +L + D W R L + ++ +FHP G GT
Sbjct: 310 VTGLSLHPTGDYLLSTSSDKHWAFSDIRTGRLLTKVIDTAEVGLTTAQFHPDGLIFGTGT 369
Query: 300 WDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR---TGRC 356
D ++WDL + V + GH P+ +SF +G +AT DA ++WDLR +
Sbjct: 370 VDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKLWDLRKLKNFKT 429
Query: 357 IMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
I +G+ V + F G +LA D V+++ ++ + LK
Sbjct: 430 IQLDDGY--EVKDLCFDQSGTYLAIAGSD--VRVYLCKQWQELK 469
Score = 156 (60.0 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 65/251 (25%), Positives = 100/251 (39%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ I+ + P+ V T S ++W VP + R H+ V + HP
Sbjct: 263 GHTKKITKVIYHPNEDTVITGSPDMNIRIWHVPTSQTQLLLRCHEGPVTGLSLHPTGDY- 321
Query: 210 AVCSLASCAQDGSVKLWSL-DKDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS- 265
L S + D K W+ D T L + ++ +FHP G GT D
Sbjct: 322 ----LLSTSSD---KHWAFSDIRTGRLLTKVIDTAEVGLTTAQFHPDGLIFGTGTVDSQV 374
Query: 266 --WRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLH-QEG 320
W L + +AN GH +S I F +G +L T D +LWDL + + Q
Sbjct: 375 KIWDLKEQSNVANFPGHTG-PISAISFSENGYYLATAADDACVKLWDLRKLKNFKTIQLD 433
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
G V + F G+ +A G D RV+ + + + H V F +LA
Sbjct: 434 DGYEVKDLCFDQSGTYLAIAGSDV--RVYLCKQWQELKVFNDHTALATGVRFGKHAQYLA 491
Query: 381 TGSEDNAVKIW 391
+ S D +K++
Sbjct: 492 STSMDRTLKLY 502
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 201 (75.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 56/193 (29%), Positives = 94/193 (48%)
Query: 214 LASCAQDGSVKLWSLDKDTPLAN---LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WR 267
LASC D SV++W + D+ + EGH+ V ++ + P G +L + +D + W+
Sbjct: 31 LASCGGDRSVRIWGREGDSWICKSVLCEGHQR-TVRKVAWSPCGNYLASASFDATTCIWK 89
Query: 268 LDTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE---VLHQEG 320
+ + LEGHE V + + PSG L TC D S +W++++ E V
Sbjct: 90 KNEDDFECVTTLEGHEN-EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS 148
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR--CIMFLEGHLKSVFSVDFSPDGYH 378
H + V + + ++A+ D +++ C LEGH +V+S+ F P G
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR 208
Query: 379 LATGSEDNAVKIW 391
LA+ S+D V+IW
Sbjct: 209 LASCSDDRTVRIW 221
Score = 169 (64.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 53/177 (29%), Positives = 88/177 (49%)
Query: 143 SIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPE--CELVQTFRGHDCNVGAI 200
S+ C G R + ++SP ++A+AS+ +W E E V T GH+ V ++
Sbjct: 54 SVLCE--GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSV 111
Query: 201 EFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTP---LANLEGHEPFRVSRIKFHPSGRFL 257
+ P G + LA+C++D SV +W +D++ ++ L H V + +HPS L
Sbjct: 112 AWAP---SGNL--LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ-DVKHVVWHPSQELL 165
Query: 258 GTCCWDHSWRL-----DTPL--ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
+ +D + +L D + A LEGHE V + F PSG+ L +C D + R+W
Sbjct: 166 ASASYDDTVKLYREEEDDWVCCATLEGHES-TVWSLAFDPSGQRLASCSDDRTVRIW 221
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ----EGHGKPVYC 327
L+ + H R + ++P+G L +C D S R+W +G + + EGH + V
Sbjct: 8 LSRILAHPDSRCWFLAWNPAGTLLASCGGDRSVRIWG-REGDSWICKSVLCEGHQRTVRK 66
Query: 328 MSFQGDGSVVATGGLDAFGRVWDLRTG--RCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
+++ G+ +A+ DA +W C+ LEGH V SV ++P G LAT S D
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD 126
Query: 386 NAVKIWDL 393
+V +W++
Sbjct: 127 KSVWVWEV 134
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 45/171 (26%), Positives = 80/171 (46%)
Query: 234 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLAN---LEGHEPFRVSR 285
L+ + H R + ++P+G L +C D S R+ D+ + EGH+ V +
Sbjct: 8 LSRILAHPDSRCWFLAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQR-TVRK 66
Query: 286 IKFHPSGRFLGTCCWDHSWRLWDLNQGQ-E-VLHQEGHGKPVYCMSFQGDGSVVATGGLD 343
+ + P G +L + +D + +W N+ E V EGH V +++ G+++AT D
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD 126
Query: 344 AFGRVWDLRTG---RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
VW++ C+ L H + V V + P LA+ S D+ VK++
Sbjct: 127 KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY 177
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 192 (72.6 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 61/242 (25%), Positives = 112/242 (46%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+ + S K+W E + T GH V + H E V S ++D ++++W
Sbjct: 434 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH----EKRV---VSGSRDATLRVW 486
Query: 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEPF 281
++ L L GH V +++ GR + + +D W +T L L+GH
Sbjct: 487 DIETGQCLHVLMGHVA-AVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN- 542
Query: 282 RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGG 341
RV ++F G + + D S R+WD+ G + GH M + + ++ +G
Sbjct: 543 RVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGN 598
Query: 342 LDAFGRVWDLRTGRCIMFLEG---HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
D+ ++WD++TG+C+ L+G H +V + F+ + + T S+D VK+WDL+
Sbjct: 599 ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEF 656
Query: 399 LK 400
++
Sbjct: 657 IR 658
Score = 181 (68.8 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 63/238 (26%), Positives = 109/238 (45%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+ + S K+W+ + ++T GH V + + + + S ++ D ++K+W
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR----DNIIISGST---DRTLKVW 446
Query: 227 SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTC-CWDHSWRLDTP--LANLEGHEPFRV 283
+ + + L GH V + H G+ W ++T L L GH V
Sbjct: 447 NAETGECIHTLYGHTS-TVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA-AV 504
Query: 284 SRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVATGGL 342
+++ GR + + +D ++WD + + LH +GH VY + F DG V +G L
Sbjct: 505 RCVQY--DGRRVVSGAYDFMVKVWD-PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 559
Query: 343 DAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
D RVWD+ TG CI L GH ++ D L +G+ D+ VKIWD++ + L+
Sbjct: 560 DTSIRVWDVETGNCIHTLTGHQSLTSGMELK-DNI-LVSGNADSTVKIWDIKTGQCLQ 615
Score = 107 (42.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 301 DHSWRLWDLNQGQEVLHQEGHGKPVY-CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D +WR +L + +VL +GH V C+ F G+ + +G D +VW TG+C+
Sbjct: 362 DTNWRRGEL-KSPKVL--KGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRT 416
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
L GH V+S D + +GS D +K+W+
Sbjct: 417 LVGHTGGVWSSQMR-DNI-IISGSTDRTLKVWN 447
Score = 62 (26.9 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 13 QNTVHYGSLEEQERKRLAANKDVDDDQEKYTN--VHTSNVYMEIDDEMAKDKQA----LL 66
QN G LEE + ++ ++D +QE+ H E ++E D+++
Sbjct: 69 QNDSQQGQLEENNNRFISVDEDSSGNQEEQEEDEEHAGEQDEEDEEEEEMDQESDDFDQS 128
Query: 67 QEFERRKKARHVNVSTDDNQ-VKLNLRQLGEP 97
+ R + H N T+ + V L + QL P
Sbjct: 129 DDSSREDEHTHTNSVTNSSSIVDLPVHQLSSP 160
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 184 (69.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 61/223 (27%), Positives = 94/223 (42%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
KLW E ++T GHD NV ++ P G + S ++D ++K+W + +
Sbjct: 7 KLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIKMWEVQTGYCVKT 61
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
GH + V ++ + G + +C D + W + T A L HE V I + P
Sbjct: 62 FTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-VECISWAP- 118
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
+ S+ G EV GH V + F G + + D RVWD
Sbjct: 119 ---------ESSYSSISEATGSEV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 165
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 166 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 208
Score = 166 (63.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 51/203 (25%), Positives = 85/203 (41%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G +S + P+ H+ +AS K+W V V+TF GH V + P++
Sbjct: 22 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR----PNQD 77
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ASC+ D +V++W + A L HE V I + P + +
Sbjct: 78 GTL-IASCSNDQTVRVWVVATKECKAELREHEHV-VECISWAPESSYSS---------IS 126
Query: 270 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
+ GH+ + V + FH G+F+ +C D + R+WD + + H V +
Sbjct: 127 EATGSEVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 185
Query: 330 FQGDGSVVATGGLDAFGRVWDLR 352
F V TG +D +VW+ R
Sbjct: 186 FHKTAPYVVTGSVDQTVKVWECR 208
Score = 121 (47.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 301 DHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
D + +LWD QG E + GH V ++ +G + + D ++W+++TG C+
Sbjct: 3 DMTIKLWDF-QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 61
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
GH + V V + DG +A+ S D V++W
Sbjct: 62 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 93
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 184 (69.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 61/223 (27%), Positives = 94/223 (42%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
KLW E ++T GHD NV ++ P G + S ++D ++K+W + +
Sbjct: 4 KLWDFQGFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIKMWEVQTGYCVKT 58
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTP--LANLEGHEPFRVSRIKFHPS 291
GH + V ++ + G + +C D + W + T A L HE V I + P
Sbjct: 59 FTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV-VECISWAP- 115
Query: 292 GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDL 351
+ S+ G EV GH V + F G + + D RVWD
Sbjct: 116 ---------ESSYSSISEATGSEV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 162
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ RC+ L H V S+DF ++ TGS D VK+W+ R
Sbjct: 163 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 205
Score = 166 (63.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 51/203 (25%), Positives = 85/203 (41%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G +S + P+ H+ +AS K+W V V+TF GH V + P++
Sbjct: 19 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR----PNQD 74
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ASC+ D +V++W + A L HE V I + P + +
Sbjct: 75 GTL-IASCSNDQTVRVWVVATKECKAELREHEHV-VECISWAPESSYSS---------IS 123
Query: 270 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
+ GH+ + V + FH G+F+ +C D + R+WD + + H V +
Sbjct: 124 EATGSEVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 182
Query: 330 FQGDGSVVATGGLDAFGRVWDLR 352
F V TG +D +VW+ R
Sbjct: 183 FHKTAPYVVTGSVDQTVKVWECR 205
>UNIPROTKB|C9JXA5 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 HOGENOM:HOG000176356 HGNC:HGNC:4398
IPI:IPI00790302 ProteinModelPortal:C9JXA5 SMR:C9JXA5 STRING:C9JXA5
PRIDE:C9JXA5 Ensembl:ENST00000451587 ArrayExpress:C9JXA5
Bgee:C9JXA5 Uniprot:C9JXA5
Length = 251
Score = 184 (69.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 60/210 (28%), Positives = 94/210 (44%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + ++ + L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG---TDSRL--LVSASQDGKLIIW----DSYTTNKVHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG F+ D+ + L T N L GH + +S +F + +
Sbjct: 100 VMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQII 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ + GH V +S DG +G DA ++WD+R
Sbjct: 159 -TSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
C GH + +V F P+GY TGS+D
Sbjct: 218 CRQTFIGHESDINAVAFFPNGYAFTTGSDD 247
Score = 141 (54.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 32/111 (28%), Positives = 56/111 (50%)
Query: 288 FHPSGRFLGTCCWDHSWRLWDLN--QGQEVLHQE--GHGKPVYCMSFQGDGSVVATGGLD 343
+ PSG F+ D+ ++ L +G + +E GH + C F D ++ + G D
Sbjct: 105 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-D 163
Query: 344 AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+WD+ TG+ + GH V S+ +PDG +G+ D ++K+WD+R
Sbjct: 164 TTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVR 214
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 200 (75.5 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 49/131 (37%), Positives = 70/131 (53%)
Query: 266 WRLDTPLA--NLEGHEPFRVSRIKFHPSGRF-LGTCCWDHSWRLWDLNQ-GQEVLHQEGH 321
W + T L NL GH+ V + F P+G L + D + R+WDLN+ G+++ GH
Sbjct: 138 WEVQTGLLLLNLSGHQDV-VRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVLSGH 196
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ VYC S D S++ + + +W +R+ I LEGH SV S DFSPD L T
Sbjct: 197 LQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVT 256
Query: 382 GSEDNAVKIWD 392
S D +V +WD
Sbjct: 257 ASYDTSVIMWD 267
Score = 155 (59.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 65/243 (26%), Positives = 100/243 (41%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+AT G K+W V L+ GH V + F P G++ L S ++D ++++W
Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTP---NGSLI-LVSASRDKTLRIW 181
Query: 227 SLDKD-TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEP 280
L+K + L GH + V P L + + S W R T + LEGH+
Sbjct: 182 DLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 240
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV--LHQ----------EGHGKPVYCM 328
VS F P L T +D S +WD G+ + LH + H + +
Sbjct: 241 SVVS-CDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHMSSLRSV 299
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F +G +AT D R+W L + F + + F P G +ATG+ D V
Sbjct: 300 CFSPEGLYLATVADDRLLRIWALELKAPVAFAP--MTNGLCCTFFPHGGVIATGTRDGHV 357
Query: 389 KIW 391
+ W
Sbjct: 358 QFW 360
Score = 144 (55.7 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 280 PFRVSRIKFHP-----SGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
P R ++ HP S L T D ++W++ G +L+ GH V +SF +G
Sbjct: 106 PSRKLWLRHHPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNG 165
Query: 335 SVV-ATGGLDAFGRVWDL-RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
S++ + D R+WDL + G+ I L GHL+ V+ SPD L + + + +V +W
Sbjct: 166 SLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWS 225
Query: 393 LRKRRLLK 400
+R L++
Sbjct: 226 MRSYTLIR 233
Score = 129 (50.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 47/181 (25%), Positives = 72/181 (39%)
Query: 200 IEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF-LG 258
+ HP + + LA+ DG +K+W + L NL GH+ V + F P+G L
Sbjct: 112 LRHHPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDV-VRDLSFTPNGSLILV 170
Query: 259 TCCWDHS---WRLDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG 312
+ D + W L+ + L GH + V P L + + S LW +
Sbjct: 171 SASRDKTLRIWDLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSY 229
Query: 313 QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372
+ EGH V F D +++ T D +WD TG + L H + VD
Sbjct: 230 TLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLH-HTQLEAPVDD 288
Query: 373 S 373
S
Sbjct: 289 S 289
Score = 118 (46.6 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH + V P L + + S LW + + EGH V F D
Sbjct: 193 LSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDS 251
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFL------------EGHLKSVFSVDFSPDGYHLATG 382
+++ T D +WD TG + L + H+ S+ SV FSP+G +LAT
Sbjct: 252 ALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHMSSLRSVCFSPEGLYLATV 311
Query: 383 SEDNAVKIWDL 393
++D ++IW L
Sbjct: 312 ADDRLLRIWAL 322
Score = 43 (20.2 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 15/64 (23%), Positives = 25/64 (39%)
Query: 148 QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTV---PECELVQTFRGHDCNVGAIEFHP 204
+ G+ P+ P H W C+ W+V P+ +GH C V + + P
Sbjct: 2 EAGE-EPLLLAELKPGRPH--QFDWKSSCETWSVAFSPDGSWFAWSQGH-CVVKLVPW-P 56
Query: 205 LPSE 208
L +
Sbjct: 57 LEEQ 60
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 200 (75.5 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 50/131 (38%), Positives = 69/131 (52%)
Query: 266 WRLDTPLA--NLEGHEPFRVSRIKFHPSGRF-LGTCCWDHSWRLWDLNQ-GQEVLHQEGH 321
W + T L NL GH+ V + F PSG L + D + R+WDLN+ G+++ GH
Sbjct: 140 WEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGH 198
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ VYC S D S++ + + +W +R+ I LEGH SV S DFSPD L T
Sbjct: 199 LQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVT 258
Query: 382 GSEDNAVKIWD 392
S D V +WD
Sbjct: 259 ASYDTNVIMWD 269
Score = 153 (58.9 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 67/243 (27%), Positives = 100/243 (41%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+AT G K+W V L+ GH V + F P G++ L S ++D ++++W
Sbjct: 128 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTP---SGSLI-LVSASRDKTLRIW 183
Query: 227 SLDKD-TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEP 280
L+K + L GH + V P L + + S W R T + LEGH+
Sbjct: 184 DLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 242
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV--LHQEGHGKP-----VYCMS---- 329
VS F P L T +D + +WD G+ + LH P V+ S
Sbjct: 243 SVVS-CDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLNPPMDDSDVHISSLRSV 301
Query: 330 -FQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F +G +AT D R+W L I F + + F P G +ATG+ D V
Sbjct: 302 CFSPEGLYLATVADDRLLRIWALELKTPIAFAP--MTNGLCCTFFPHGGVIATGTRDGHV 359
Query: 389 KIW 391
+ W
Sbjct: 360 QFW 362
Score = 140 (54.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVV-ATGGLDAFGRVWDL-R 352
L T D ++W++ G +L+ GH V +SF GS++ + D R+WDL +
Sbjct: 128 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 187
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
G+ I L GHL+ V+ SPD L + + + +V +W +R L++
Sbjct: 188 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIR 235
Score = 127 (49.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 43/159 (27%), Positives = 64/159 (40%)
Query: 203 HPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF-LGTCC 261
HP + + LA+ DG +K+W + L NL GH+ V + F PSG L +
Sbjct: 117 HPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSAS 175
Query: 262 WDHS---WRLDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV 315
D + W L+ + L GH + V P L + + S LW + +
Sbjct: 176 RDKTLRIWDLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLI 234
Query: 316 LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
EGH V F D +++ T D +WD TG
Sbjct: 235 RKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTG 273
Score = 117 (46.2 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH + V P L + + S LW + + EGH V F D
Sbjct: 195 LSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDS 253
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFL------------EGHLKSVFSVDFSPDGYHLATG 382
+++ T D +WD TG + L + H+ S+ SV FSP+G +LAT
Sbjct: 254 ALLVTASYDTNVIMWDPYTGERLRSLHHTQLNPPMDDSDVHISSLRSVCFSPEGLYLATV 313
Query: 383 SEDNAVKIWDL 393
++D ++IW L
Sbjct: 314 ADDRLLRIWAL 324
Score = 43 (20.2 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 15/58 (25%), Positives = 22/58 (37%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTV---PECELVQTFRGHDCNVGAIEFHPLPSE 208
P+ P H W C+ W+V P+ +GH C V I + PL +
Sbjct: 9 PLLLAELKPGRPH--QFDWKSSCETWSVAFSPDGSWFAWSQGH-CIVKLIPW-PLEEQ 62
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 200 (75.5 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 50/131 (38%), Positives = 69/131 (52%)
Query: 266 WRLDTPLA--NLEGHEPFRVSRIKFHPSGRF-LGTCCWDHSWRLWDLNQ-GQEVLHQEGH 321
W + T L NL GH+ V + F PSG L + D + R+WDLN+ G+++ GH
Sbjct: 140 WEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGH 198
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ VYC S D S++ + + +W +R+ I LEGH SV S DFSPD L T
Sbjct: 199 LQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVT 258
Query: 382 GSEDNAVKIWD 392
S D V +WD
Sbjct: 259 ASYDTNVIMWD 269
Score = 152 (58.6 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 65/243 (26%), Positives = 100/243 (41%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+AT G K+W V L+ GH V + F P G++ L S ++D ++++W
Sbjct: 128 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTP---SGSLI-LVSASRDKTLRIW 183
Query: 227 SLDKD-TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEP 280
L+K + L GH + V P L + + S W R T + LEGH+
Sbjct: 184 DLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 242
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV--LHQ----------EGHGKPVYCM 328
VS F P L T +D + +WD G+ + LH + H + +
Sbjct: 243 SVVS-CDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSV 301
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F +G +AT D R+W L I F + + F P G +ATG+ D V
Sbjct: 302 CFSPEGLYLATVADDRLLRIWALELKTPIAFAP--MTNGLCCTFFPHGGVIATGTRDGHV 359
Query: 389 KIW 391
+ W
Sbjct: 360 QFW 362
Score = 140 (54.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVV-ATGGLDAFGRVWDL-R 352
L T D ++W++ G +L+ GH V +SF GS++ + D R+WDL +
Sbjct: 128 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 187
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
G+ I L GHL+ V+ SPD L + + + +V +W +R L++
Sbjct: 188 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIR 235
Score = 127 (49.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 43/159 (27%), Positives = 64/159 (40%)
Query: 203 HPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF-LGTCC 261
HP + + LA+ DG +K+W + L NL GH+ V + F PSG L +
Sbjct: 117 HPQVPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSAS 175
Query: 262 WDHS---WRLDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV 315
D + W L+ + L GH + V P L + + S LW + +
Sbjct: 176 RDKTLRIWDLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLI 234
Query: 316 LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
EGH V F D +++ T D +WD TG
Sbjct: 235 RKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTG 273
Score = 117 (46.2 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH + V P L + + S LW + + EGH V F D
Sbjct: 195 LSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDS 253
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFL------------EGHLKSVFSVDFSPDGYHLATG 382
+++ T D +WD TG + L + H+ S+ SV FSP+G +LAT
Sbjct: 254 ALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATV 313
Query: 383 SEDNAVKIWDL 393
++D ++IW L
Sbjct: 314 ADDRLLRIWAL 324
Score = 43 (20.2 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 15/58 (25%), Positives = 22/58 (37%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTV---PECELVQTFRGHDCNVGAIEFHPLPSE 208
P+ P H W C+ W+V P+ +GH C V I + PL +
Sbjct: 9 PLLLAELKPGRPH--QFDWKSSCETWSVAFSPDGSWFAWSQGH-CIVKLIPW-PLEEQ 62
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 200 (75.5 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 50/131 (38%), Positives = 69/131 (52%)
Query: 266 WRLDTPLA--NLEGHEPFRVSRIKFHPSGRF-LGTCCWDHSWRLWDLNQ-GQEVLHQEGH 321
W + T L NL GH+ V + F PSG L + D + R+WDLN+ G+++ GH
Sbjct: 155 WEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGH 213
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
+ VYC S D S++ + + +W +R+ I LEGH SV S DFSPD L T
Sbjct: 214 LQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVT 273
Query: 382 GSEDNAVKIWD 392
S D V +WD
Sbjct: 274 ASYDTNVIMWD 284
Score = 152 (58.6 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 65/243 (26%), Positives = 100/243 (41%)
Query: 167 VATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLW 226
+AT G K+W V L+ GH V + F P G++ L S ++D ++++W
Sbjct: 143 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTP---SGSLI-LVSASRDKTLRIW 198
Query: 227 SLDKD-TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---W--RLDTPLANLEGHEP 280
L+K + L GH + V P L + + S W R T + LEGH+
Sbjct: 199 DLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQS 257
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV--LHQ----------EGHGKPVYCM 328
VS F P L T +D + +WD G+ + LH + H + +
Sbjct: 258 SVVS-CDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSV 316
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAV 388
F +G +AT D R+W L I F + + F P G +ATG+ D V
Sbjct: 317 CFSPEGLYLATVADDRLLRIWALELKTPIAFAP--MTNGLCCTFFPHGGVIATGTRDGHV 374
Query: 389 KIW 391
+ W
Sbjct: 375 QFW 377
Score = 140 (54.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 33/108 (30%), Positives = 56/108 (51%)
Query: 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVV-ATGGLDAFGRVWDL-R 352
L T D ++W++ G +L+ GH V +SF GS++ + D R+WDL +
Sbjct: 143 LATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNK 202
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
G+ I L GHL+ V+ SPD L + + + +V +W +R L++
Sbjct: 203 HGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIR 250
Score = 127 (49.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 43/159 (27%), Positives = 64/159 (40%)
Query: 203 HPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRF-LGTCC 261
HP + + LA+ DG +K+W + L NL GH+ V + F PSG L +
Sbjct: 132 HPQVPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSAS 190
Query: 262 WDHS---WRLDT---PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV 315
D + W L+ + L GH + V P L + + S LW + +
Sbjct: 191 RDKTLRIWDLNKHGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLI 249
Query: 316 LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
EGH V F D +++ T D +WD TG
Sbjct: 250 RKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTG 288
Score = 117 (46.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH + V P L + + S LW + + EGH V F D
Sbjct: 210 LSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDS 268
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFL------------EGHLKSVFSVDFSPDGYHLATG 382
+++ T D +WD TG + L + H+ S+ SV FSP+G +LAT
Sbjct: 269 ALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATV 328
Query: 383 SEDNAVKIWDL 393
++D ++IW L
Sbjct: 329 ADDRLLRIWAL 339
Score = 43 (20.2 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 15/58 (25%), Positives = 22/58 (37%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTV---PECELVQTFRGHDCNVGAIEFHPLPSE 208
P+ P H W C+ W+V P+ +GH C V I + PL +
Sbjct: 24 PLLLAELKPGRPH--QFDWKSSCETWSVAFSPDGSWFAWSQGH-CIVKLIPW-PLEEQ 77
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 200 (75.5 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 60/205 (29%), Positives = 91/205 (44%)
Query: 152 TRPISYCSFS-PDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGA 210
T +S CSF+ D Q + TAS G C LW V +L+Q+F GH +V ++ P +
Sbjct: 153 TNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212
Query: 211 VCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT 270
S C D +W + + E HE ++ ++++PSG + D + RL
Sbjct: 213 FVS-GGC--DKKAMVWDMRSGQCIQAFETHES-DINSVRYYPSGDAFASGSDDATCRLYD 268
Query: 271 PLANLE----GHEP--FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
A+ E E F S + F SGR L D++ +WD+ +G V GH
Sbjct: 269 LRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENR 328
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVW 349
V + DG+ +G D RVW
Sbjct: 329 VSTLRVSPDGTAFCSGSWDHTLRVW 353
Score = 179 (68.1 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD--GSVVATGGLDAFGRVWDLRTG 354
T D + LWD+ GQ + GHG V C+ G+ +GG D VWD+R+G
Sbjct: 171 TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG 230
Query: 355 RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
+CI E H + SV + P G A+GS+D +++DLR R
Sbjct: 231 QCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADR 273
Score = 144 (55.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 51/189 (26%), Positives = 84/189 (44%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPS--GR-FL-GTC-----CWDH 264
+ + + DG+ LW ++ L + GH V + PS G F+ G C WD
Sbjct: 169 ILTASGDGTCALWDVESGQLLQSFHGHGA-DVLCLDLAPSETGNTFVSGGCDKKAMVWD- 226
Query: 265 SWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL--HQEGHG 322
R + E HE ++ ++++PSG + D + RL+DL +EV +E
Sbjct: 227 -MRSGQCIQAFETHES-DINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESII 284
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
+ F G ++ G D VWD+ G + L GH V ++ SPDG +G
Sbjct: 285 FGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSG 344
Query: 383 SEDNAVKIW 391
S D+ +++W
Sbjct: 345 SWDHTLRVW 353
Score = 136 (52.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 47/145 (32%), Positives = 64/145 (44%)
Query: 258 GTCC-WD-HSWRLDTPLANLEGHEPFRVSRIKFHPS--GR-FLGTCCWDHSWRLWDLNQG 312
GTC WD S +L L + GH V + PS G F+ C D +WD+ G
Sbjct: 176 GTCALWDVESGQL---LQSFHGHGA-DVLCLDLAPSETGNTFVSGGC-DKKAMVWDMRSG 230
Query: 313 QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR--CIMFLEGHLKSVFSV 370
Q + E H + + + G A+G DA R++DLR R I E + SV
Sbjct: 231 QCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV 290
Query: 371 DFSPDGYHLATGSEDNAVKIWDLRK 395
DFS G L G D + +WD+ K
Sbjct: 291 DFSLSGRLLFAGYNDYTINVWDVLK 315
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 199 (75.1 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 54/193 (27%), Positives = 93/193 (48%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANL---EGHEPFRVSRIKFHPSGRFLGTCCWDHS---WR 267
LASC D +++W + D+ + EGH+ V ++ + P G +L + +D + W+
Sbjct: 31 LASCGGDRKIRIWGTEGDSWICKSVLSEGHQR-TVRKVAWSPCGNYLASASFDATTCIWK 89
Query: 268 LDTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE---VLHQEG 320
+ + LEGHE V + + PSG L TC D S +W++++ E V
Sbjct: 90 KNQDDFECVTTLEGHEN-EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSS 148
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR--CIMFLEGHLKSVFSVDFSPDGYH 378
H + V + + ++A+ D +++ C LEGH +V+S+ F P G
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQR 208
Query: 379 LATGSEDNAVKIW 391
LA+ S+D V+IW
Sbjct: 209 LASCSDDRTVRIW 221
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 51/170 (30%), Positives = 85/170 (50%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPS 207
G R + ++SP ++A+AS+ +W + E V T GH+ V ++ + P
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP--- 115
Query: 208 EGAVCSLASCAQDGSVKLWSLDKDTP---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
G + LA+C++D SV +W +D++ ++ L H V + +HPS L + +D
Sbjct: 116 SGNL--LATCSRDKSVWVWEVDEEDEYECVSVLSSHTQ-DVKHVVWHPSQELLASASYDD 172
Query: 265 SWRL-----DTPL--ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
+ +L D + A LEGHE V I F PSG+ L +C D + R+W
Sbjct: 173 TVKLYQEEGDDWVCCATLEGHES-TVWSIAFDPSGQRLASCSDDRTVRIW 221
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 39/128 (30%), Positives = 63/128 (49%)
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG-----QEVLHQEGHGKPVYC 327
+ + H R + ++PSG L +C D R+W +G + VL EGH + V
Sbjct: 9 SRVPAHPDSRCWFLAWNPSGTLLASCGGDRKIRIWG-TEGDSWICKSVL-SEGHQRTVRK 66
Query: 328 MSFQGDGSVVATGGLDAFGRVWDLRTG--RCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
+++ G+ +A+ DA +W C+ LEGH V SV ++P G LAT S D
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD 126
Query: 386 NAVKIWDL 393
+V +W++
Sbjct: 127 KSVWVWEV 134
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 45/170 (26%), Positives = 78/170 (45%)
Query: 235 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANL---EGHEPFRVSRI 286
+ + H R + ++PSG L +C D R+ D+ + EGH+ V ++
Sbjct: 9 SRVPAHPDSRCWFLAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQR-TVRKV 67
Query: 287 KFHPSGRFLGTCCWDHSWRLWDLNQGQ-E-VLHQEGHGKPVYCMSFQGDGSVVATGGLDA 344
+ P G +L + +D + +W NQ E V EGH V +++ G+++AT D
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK 127
Query: 345 FGRVWDLRTG---RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
VW++ C+ L H + V V + P LA+ S D+ VK++
Sbjct: 128 SVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLY 177
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 199 (75.1 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 54/193 (27%), Positives = 93/193 (48%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANL---EGHEPFRVSRIKFHPSGRFLGTCCWDHS---WR 267
LASC D +++W + D+ + EGH+ V ++ + P G +L + +D + W+
Sbjct: 31 LASCGGDRKIRIWGTEGDSWICKSVLSEGHQR-TVRKVAWSPCGNYLASASFDATTCIWK 89
Query: 268 LDTP----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE---VLHQEG 320
+ + LEGHE V + + PSG L TC D S +W++++ E V
Sbjct: 90 KNQDDFECVTTLEGHEN-EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS 148
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR--CIMFLEGHLKSVFSVDFSPDGYH 378
H + V + + ++A+ D +++ C LEGH +V+S+ F P G
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQR 208
Query: 379 LATGSEDNAVKIW 391
LA+ S+D V+IW
Sbjct: 209 LASCSDDRTVRIW 221
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 51/170 (30%), Positives = 85/170 (50%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPS 207
G R + ++SP ++A+AS+ +W + E V T GH+ V ++ + P
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP--- 115
Query: 208 EGAVCSLASCAQDGSVKLWSLDKDTP---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
G + LA+C++D SV +W +D++ ++ L H V + +HPS L + +D
Sbjct: 116 SGNL--LATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ-DVKHVVWHPSQELLASASYDD 172
Query: 265 SWRL-----DTPL--ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
+ +L D + A LEGHE V I F PSG+ L +C D + R+W
Sbjct: 173 TVKLYQEEGDDWVCCATLEGHES-TVWSIAFDPSGQRLASCSDDRTVRIW 221
Score = 143 (55.4 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 38/128 (29%), Positives = 63/128 (49%)
Query: 273 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG-----QEVLHQEGHGKPVYC 327
+ + H R + ++P+G L +C D R+W +G + VL EGH + V
Sbjct: 9 SRVPAHPDSRCWFLAWNPTGTLLASCGGDRKIRIWG-TEGDSWICKSVL-SEGHQRTVRK 66
Query: 328 MSFQGDGSVVATGGLDAFGRVWDLRTG--RCIMFLEGHLKSVFSVDFSPDGYHLATGSED 385
+++ G+ +A+ DA +W C+ LEGH V SV ++P G LAT S D
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD 126
Query: 386 NAVKIWDL 393
+V +W++
Sbjct: 127 KSVWVWEV 134
Score = 134 (52.2 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 44/170 (25%), Positives = 78/170 (45%)
Query: 235 ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTPLANL---EGHEPFRVSRI 286
+ + H R + ++P+G L +C D R+ D+ + EGH+ V ++
Sbjct: 9 SRVPAHPDSRCWFLAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQR-TVRKV 67
Query: 287 KFHPSGRFLGTCCWDHSWRLWDLNQGQ-E-VLHQEGHGKPVYCMSFQGDGSVVATGGLDA 344
+ P G +L + +D + +W NQ E V EGH V +++ G+++AT D
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK 127
Query: 345 FGRVWDLRTG---RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
VW++ C+ L H + V V + P LA+ S D+ VK++
Sbjct: 128 SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY 177
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/158 (28%), Positives = 74/158 (46%)
Query: 127 TRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECEL 186
T ++ + +K +S +++ + I+ S +P+ + ATAS KLW V E
Sbjct: 502 TSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEP 561
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
+ + + H V +EF P+ C L +C+ DG++K+WSL T L LEGH+ V
Sbjct: 562 ITSIKAHRRGVWHVEFSPIDQ----CFL-TCSADGTIKIWSLSDYTCLKTLEGHKG-SVL 615
Query: 247 RIKFHPSGRFLGTCCWD---HSWRLDTP--LANLEGHE 279
+ F G + + + W + T L EGHE
Sbjct: 616 KASFISFGMQIVSVASEGLIKLWNIKTNECLNTFEGHE 653
Score = 152 (58.6 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 46/182 (25%), Positives = 81/182 (44%)
Query: 218 AQDG-SVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRL-DTPL 272
+Q G +K+ + T ++ +E ++S P+ + C + +R+ D L
Sbjct: 64 SQAGYEIKIIDTEHGTVISKIESDT--KISTFALSPNNEEILIGCSNLQIKQYRIEDQSL 121
Query: 273 ANL-EGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ 331
+ +GHE ++ I H SG + + D + ++WDL +G H H V + F
Sbjct: 122 VKIWKGHEG-PINEIDIHSSGNIVASASSDKTVKVWDLEKGY-CTHNFQHDDVVTMLKFH 179
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
+ T LD RV+DL T C++ L HL + + FS G L + D + +W
Sbjct: 180 PTLLKLVTVCLDLNIRVYDLVTKECVI-LTNHLSQISGITFSNSGKELISSGRDKVLNVW 238
Query: 392 DL 393
D+
Sbjct: 239 DM 240
Score = 140 (54.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 35/157 (22%), Positives = 69/157 (43%)
Query: 240 HEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT--PLANLEGHEPFRVSRIKFHPSGRF 294
HE ++ I P+ + T D W ++ P+ +++ H V ++F P +
Sbjct: 526 HEK-DINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIKAHRR-GVWHVEFSPIDQC 583
Query: 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG 354
TC D + ++W L+ + EGH V SF G + + + ++W+++T
Sbjct: 584 FLTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASFISFGMQIVSVASEGLIKLWNIKTN 643
Query: 355 RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
C+ EGH ++++ + D TG D+ + W
Sbjct: 644 ECLNTFEGHESKIWALSVAKDQERFITGGSDSKLIAW 680
Score = 138 (53.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 46/162 (28%), Positives = 82/162 (50%)
Query: 151 DTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGA 210
DT+ IS + SP+++ + + K + + + LV+ ++GH+ + I+ H S G
Sbjct: 87 DTK-ISTFALSPNNEEILIGCSNLQIKQYRIEDQSLVKIWKGHEGPINEIDIH---SSGN 142
Query: 211 VCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR--- 267
+ +AS + D +VK+W L+K N + H+ V+ +KFHP+ L T C D + R
Sbjct: 143 I--VASASSDKTVKVWDLEKGYCTHNFQ-HDDV-VTMLKFHPTLLKLVTVCLDLNIRVYD 198
Query: 268 LDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDL 309
L T + + ++S I F SG+ L + D +WD+
Sbjct: 199 LVTKECVILTNHLSQISGITFSNSGKELISSGRDKVLNVWDM 240
Score = 130 (50.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 278 HEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVV 337
HE ++ I P+ + T D +LW++N + + + H + V+ + F
Sbjct: 526 HEK-DINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCF 584
Query: 338 ATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
T D ++W L C+ LEGH SV F G + + + + +K+W+++
Sbjct: 585 LTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASFISFGMQIVSVASEGLIKLWNIKTNE 644
Query: 398 LL 399
L
Sbjct: 645 CL 646
Score = 120 (47.3 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 28/71 (39%), Positives = 37/71 (52%)
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
D +VAT + + +DL T R L GH V SVD S DG H+ +GS D + IWD
Sbjct: 396 DNIIVATNSNEI--KTYDLNTKRA-QVLRGHEDLVMSVDVSADGKHIISGSRDKSAMIWD 452
Query: 393 LRKRRLLKWCT 403
L K+ + T
Sbjct: 453 LEKKESIAQLT 463
Score = 108 (43.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLA 380
H K + +S + + AT D++ ++W++ I ++ H + V+ V+FSP
Sbjct: 526 HEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCFL 585
Query: 381 TGSEDNAVKIWDLRKRRLLK 400
T S D +KIW L LK
Sbjct: 586 TCSADGTIKIWSLSDYTCLK 605
Score = 93 (37.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 27/91 (29%), Positives = 41/91 (45%)
Query: 305 RLWDLNQGQ-EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH 363
+ +DLN + +VL GH V + DG + +G D +WDL I L GH
Sbjct: 408 KTYDLNTKRAQVLR--GHEDLVMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQLTGH 465
Query: 364 --LKSVFSVDFSPDGYHLA-TGSEDNAVKIW 391
+ S ++ P A T S+D +K+W
Sbjct: 466 TGVISCVALPKKPSTSMFAITASDDRTIKLW 496
Score = 69 (29.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 18/67 (26%), Positives = 29/67 (43%)
Query: 161 SPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQD 220
S D +H+ + S +W + + E + GH G I LP + + A A D
Sbjct: 433 SADGKHIISGSRDKSAMIWDLEKKESIAQLTGH---TGVISCVALPKKPSTSMFAITASD 489
Query: 221 G-SVKLW 226
++KLW
Sbjct: 490 DRTIKLW 496
Score = 66 (28.3 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G PI+ VA+AS K+W + + F+ HD V ++FHP
Sbjct: 127 GHEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQ-HDDVVTMLKFHP----- 180
Query: 210 AVCSLASCAQDGSVKLWSL-DKDTPLANLEGHEPFRVSRIKFHPSGRFL 257
+ L + D +++++ L K+ + L H ++S I F SG+ L
Sbjct: 181 TLLKLVTVCLDLNIRVYDLVTKECVI--LTNHLS-QISGITFSNSGKEL 226
Score = 65 (27.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
Q RGH+ V +++ + ++G + S ++D S +W L+K +A L GH
Sbjct: 418 QVLRGHEDLVMSVD---VSADGK--HIISGSRDKSAMIWDLEKKESIAQLTGH 465
Score = 64 (27.6 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 17/66 (25%), Positives = 32/66 (48%)
Query: 265 SWRLDTPLAN-LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
++ L+T A L GHE +S + G+ + + D S +WDL + + + GH
Sbjct: 409 TYDLNTKRAQVLRGHEDLVMS-VDVSADGKHIISGSRDKSAMIWDLEKKESIAQLTGHTG 467
Query: 324 PVYCMS 329
+ C++
Sbjct: 468 VISCVA 473
Score = 49 (22.3 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCI 357
GD + GG + R W TG CI
Sbjct: 297 GDDITIVIGGEEVL-RAWCTETGECI 321
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 195 (73.7 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 64/248 (25%), Positives = 106/248 (42%)
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ 219
F+ D + T +LW L++T++ H V + H CS C
Sbjct: 26 FNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDV--HVTSDNAKFCS---CGG 80
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-DTPLANLEGH 278
D V W + + GH+ V+ +KF+ S + + +D S R+ D ++E
Sbjct: 81 DRQVYYWDVSTGRVIRKFRGHDG-EVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPV 139
Query: 279 E---PF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD 333
+ F V + + G+ D + R +D+ G+E+ + G+PV C+S D
Sbjct: 140 QIIDTFLDTVMSVVLTKTEIIGGSV--DGTVRTFDMRIGREM--SDNLGQPVNCISISND 195
Query: 334 GSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD--FSPDGYHLATGSEDNAVKIW 391
G+ V G LD+ R+ D TG + +GH+ F D + H+ GSED V W
Sbjct: 196 GNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFW 255
Query: 392 DLRKRRLL 399
DL ++L
Sbjct: 256 DLVDAKVL 263
Score = 145 (56.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L+GHE V +F+ G + TC D + RLW+ ++G + + HG+ V + D
Sbjct: 14 LKGHEG-AVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+ + G D WD+ TGR I GH V +V F+ + + D ++++WD R
Sbjct: 73 AKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCR 132
Score = 118 (46.6 bits), Expect = 0.00029, P = 0.00029
Identities = 51/220 (23%), Positives = 87/220 (39%)
Query: 179 WTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDT--PLAN 236
W V +++ FRGHD V A++F+ S V S D S+++W + P+
Sbjct: 87 WDVSTGRVIRKFRGHDGEVNAVKFND--SSSVV---VSAGFDRSLRVWDCRSHSVEPVQI 141
Query: 237 LEGHEPFRVSRI--KFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRF 294
++ +S + K G + R+ +++ G +P V+ I G
Sbjct: 142 IDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSDNLG-QP--VNCISISNDGNC 198
Query: 295 LGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVY---CMSFQGDGSVVATGGLDAFGRVWDL 351
+ C D + RL D G+ + +GH + C D V+ G D WDL
Sbjct: 199 VLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIG-GSEDGLVFFWDL 257
Query: 352 RTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
+ + H V SV + P + T S D +++W
Sbjct: 258 VDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 200 (75.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 60/205 (29%), Positives = 91/205 (44%)
Query: 152 TRPISYCSFS-PDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGA 210
T +S CSF+ D Q + TAS G C LW V +L+Q+F GH +V ++ P +
Sbjct: 195 TNYLSACSFTNSDMQQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 254
Query: 211 VCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT 270
S C D +W + + E HE ++ ++++PSG + D + RL
Sbjct: 255 FVS-GGC--DKKAMVWDMRSGQCIQAFETHES-DINSVRYYPSGDAFASGSDDATCRLYD 310
Query: 271 PLANLE----GHEP--FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
A+ E E F S + F SGR L D++ +WD+ +G V GH
Sbjct: 311 LRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENR 370
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVW 349
V + DG+ +G D RVW
Sbjct: 371 VSTLRVSPDGTAFCSGSWDHTLRVW 395
Score = 179 (68.1 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD--GSVVATGGLDAFGRVWDLRTG 354
T D + LWD+ GQ + GHG V C+ G+ +GG D VWD+R+G
Sbjct: 213 TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG 272
Query: 355 RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
+CI E H + SV + P G A+GS+D +++DLR R
Sbjct: 273 QCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADR 315
Score = 144 (55.7 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 51/189 (26%), Positives = 84/189 (44%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPS--GR-FL-GTC-----CWDH 264
+ + + DG+ LW ++ L + GH V + PS G F+ G C WD
Sbjct: 211 ILTASGDGTCALWDVESGQLLQSFHGHGA-DVLCLDLAPSETGNTFVSGGCDKKAMVWD- 268
Query: 265 SWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL--HQEGHG 322
R + E HE ++ ++++PSG + D + RL+DL +EV +E
Sbjct: 269 -MRSGQCIQAFETHES-DINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESII 326
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
+ F G ++ G D VWD+ G + L GH V ++ SPDG +G
Sbjct: 327 FGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSG 386
Query: 383 SEDNAVKIW 391
S D+ +++W
Sbjct: 387 SWDHTLRVW 395
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 47/145 (32%), Positives = 64/145 (44%)
Query: 258 GTCC-WD-HSWRLDTPLANLEGHEPFRVSRIKFHPS--GR-FLGTCCWDHSWRLWDLNQG 312
GTC WD S +L L + GH V + PS G F+ C D +WD+ G
Sbjct: 218 GTCALWDVESGQL---LQSFHGHGA-DVLCLDLAPSETGNTFVSGGC-DKKAMVWDMRSG 272
Query: 313 QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR--CIMFLEGHLKSVFSV 370
Q + E H + + + G A+G DA R++DLR R I E + SV
Sbjct: 273 QCIQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV 332
Query: 371 DFSPDGYHLATGSEDNAVKIWDLRK 395
DFS G L G D + +WD+ K
Sbjct: 333 DFSLSGRLLFAGYNDYTINVWDVLK 357
>POMBASE|SPBC21B10.05c [details] [associations]
symbol:pop3 "WD repeat protein Pop3" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0031929 "TOR signaling cascade" evidence=TAS] [GO:0031931
"TORC1 complex" evidence=IDA] [GO:0031932 "TORC2 complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC21B10.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000226 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 EMBL:CU329671 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0031931 GO:GO:0031932
KO:K08266 HOGENOM:HOG000208395 OMA:NNKGNCY OrthoDB:EOG4GF6PT
EMBL:AB016895 PIR:T39922 RefSeq:NP_595682.1
ProteinModelPortal:O74184 IntAct:O74184 STRING:O74184
EnsemblFungi:SPBC21B10.05c.1 GeneID:2540645 KEGG:spo:SPBC21B10.05c
NextBio:20801769 Uniprot:O74184
Length = 314
Score = 196 (74.1 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 62/234 (26%), Positives = 100/234 (42%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T ++ +F D + +AT+S G K+W + VQ H V + HP ++G
Sbjct: 81 GHTNNVTAIAFHCDGKWLATSSEDGTVKVWDM-RAPSVQRNYDHKSPVNDLLIHP--NQG 137
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL------GTC-CW 262
L SC Q G V+ W L +++ L E +S I G L G C W
Sbjct: 138 ---ELLSCDQSGRVRAWDLGENSCTHELIPEEDVPMSSITVGSDGSMLIAGNNKGNCYVW 194
Query: 263 ---DHSWR-LDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
+H L P+ + H+ + ++R P + L TC D + +W +L +
Sbjct: 195 RMLNHQGASLLQPVVKFQAHQRY-ITRCVLSPDVKHLATCSADATVNIWSTEDMSFMLER 253
Query: 319 --EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSV 370
+GH + V+ +F D + + T D R+W+L +G I GH K+ V
Sbjct: 254 RLQGHQRWVWDCAFSADSTYLVTASSDHVARLWELSSGETIRQYSGHHKAAVCV 307
Score = 171 (65.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 74/275 (26%), Positives = 123/275 (44%)
Query: 141 SLSIYCS---QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTV-PECEL-VQTFRGHDC 195
+LS CS Q D++ C SPD + +A A + +L+ + ++ + TF GH
Sbjct: 27 ALSGICSRTIQHADSQVNRLC-ISPDKKFLAAAG-NPHVRLYDINTSSQMPLMTFEGHTN 84
Query: 196 NVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR 255
NV AI FH +G LA+ ++DG+VK+W + + N + P V+ + HP+
Sbjct: 85 NVTAIAFH---CDGKW--LATSSEDGTVKVWDMRAPSVQRNYDHKSP--VNDLLIHPNQG 137
Query: 256 FLGTCCWD---HSWRL--DTPLANLEGHEPFRVSRIKFHPSGRFL------GTCCWDHSW 304
L +C +W L ++ L E +S I G L G C + W
Sbjct: 138 ELLSCDQSGRVRAWDLGENSCTHELIPEEDVPMSSITVGSDGSMLIAGNNKGNC---YVW 194
Query: 305 RLWDLNQG----QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF- 359
R+ + +QG Q V+ + H + + D +AT DA +W ++
Sbjct: 195 RMLN-HQGASLLQPVVKFQAHQRYITRCVLSPDVKHLATCSADATVNIWSTEDMSFMLER 253
Query: 360 -LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
L+GH + V+ FS D +L T S D+ ++W+L
Sbjct: 254 RLQGHQRWVWDCAFSADSTYLVTASSDHVARLWEL 288
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/100 (33%), Positives = 52/100 (52%)
Query: 300 WDHSWRLWDLNQG---QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+DH+ R W+ G + + H + + C+S D +A G + R++D+ T
Sbjct: 18 YDHTIRFWEALSGICSRTIQHADSQVNRL-CIS--PDKKFLAAAG-NPHVRLYDINTSSQ 73
Query: 357 --IMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
+M EGH +V ++ F DG LAT SED VK+WD+R
Sbjct: 74 MPLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMR 113
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 197 (74.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 60/224 (26%), Positives = 98/224 (43%)
Query: 186 LVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANL---EGHEP 242
L T +GH + + +HP +G S ASC +D ++++WS +T +GH+
Sbjct: 6 LEHTLQGHKGRIWGVAWHP---KGN--SFASCGEDKAIRIWSQSGNTWTTKTILSDGHKR 60
Query: 243 FRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC 299
+ +++ P G +L + +D + W A LEGHE V + + SG L TC
Sbjct: 61 -TIREVRWSPCGEYLASASFDATTAIWSKHECNATLEGHEN-EVKSVSWSQSGGLLATCS 118
Query: 300 WDHSWRLWDLNQGQE---VLHQEGHGKPVYCMSFQGDGSVVATGGLD---------AFGR 347
D S +W++ E H + V + + ++A+ D A
Sbjct: 119 RDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSKEILASASYDNTIKMYAESALDS 178
Query: 348 VWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
WD C L H +V+S+DF DG L + S+D +KIW
Sbjct: 179 DWD-----CTATLSSHTSTVWSIDFEADGERLVSCSDDTTLKIW 217
Score = 144 (55.7 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ---EVLHQEGHGKPVYCMSFQ 331
L+GH+ R+ + +HP G +C D + R+W + + + +GH + + + +
Sbjct: 10 LQGHKG-RIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWS 68
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
G +A+ DA +W C LEGH V SV +S G LAT S D +V IW
Sbjct: 69 PCGEYLASASFDATTAIWSKH--ECNATLEGHENEVKSVSWSQSGGLLATCSRDKSVWIW 126
Query: 392 DL 393
++
Sbjct: 127 EV 128
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 47/170 (27%), Positives = 77/170 (45%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G R I +SP +++A+AS+ +W+ EC T GH+ V ++ + G
Sbjct: 57 GHKRTIREVRWSPCGEYLASASFDATTAIWSKHECNA--TLEGHENEVKSVSWS---QSG 111
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPL---ANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 266
+ LA+C++D SV +W + D A L H V R+ +HPS L + +D++
Sbjct: 112 GL--LATCSRDKSVWIWEVAGDDEFECAAVLNAHTQ-DVKRVVWHPSKEILASASYDNTI 168
Query: 267 R------LDTP---LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
+ LD+ A L H V I F G L +C D + ++W
Sbjct: 169 KMYAESALDSDWDCTATLSSHTS-TVWSIDFEADGERLVSCSDDTTLKIW 217
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 175 (66.7 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 42/135 (31%), Positives = 73/135 (54%)
Query: 263 DHSWRLDT-PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGH 321
+ +WR T + GH V+ ++F+ ++L T +D + ++W ++ G+ V GH
Sbjct: 366 EKNWRKGTHTIKTFTGHSD-GVTCLQFNR--KYLMTGSYDTTIKIWKIDSGECVKTLTGH 422
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
K V + F D + +GGLD+ +VW+ TG+CI GH +V SVDF+ + +
Sbjct: 423 TKGVRALVF--DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS--IVS 478
Query: 382 GSEDNAVKIWDLRKR 396
GS D+ V++W + R
Sbjct: 479 GSADHTVRVWHVDSR 493
Score = 139 (54.0 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 44/173 (25%), Positives = 75/173 (43%)
Query: 165 QHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224
+++ T S+ K+W + E V+T GH V A+ F L S D ++K
Sbjct: 394 KYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQ-------KLISGGLDSTIK 446
Query: 225 LWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLA-NLEGHEP 280
+W+ +A GHE VS + F G+ DH+ W +D+ L GH
Sbjct: 447 VWNYHTGQCIATYRGHEDAVVS-VDFTNKSIVSGSA--DHTVRVWHVDSRTCYTLRGHTD 503
Query: 281 FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV-----LHQEGHGKPVYCM 328
+ V+ +K H + + + D + R+WD+N + + + GH V C+
Sbjct: 504 W-VNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNGHIGQVQCI 555
Score = 120 (47.3 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 339 TGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
T LD ++WD+ TG+CI GH++ V+S+ + D + + +G+ D +K+WDL+ +
Sbjct: 643 TSALDNTIKLWDVATGKCIRTQFGHIEGVWSI--AADTFRIISGAHDRLIKVWDLQNGKC 700
Query: 399 L 399
L
Sbjct: 701 L 701
Score = 105 (42.0 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 289 HPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRV 348
+P+ FL T D++ +LWD+ G+ + Q GH + V+ S D + +G D +V
Sbjct: 637 YPT-HFL-TSALDNTIKLWDVATGKCIRTQFGHIEGVW--SIAADTFRIISGAHDRLIKV 692
Query: 349 WDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
WDL+ G+C+ + SV V S D +A G E+ VK++
Sbjct: 693 WDLQNGKCLHTFSNN-SSVSCVGLS-DSRFVA-GLENGEVKMY 732
Score = 91 (37.1 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T+ + F D+Q + + K+W + + T+RGH+ V +++F
Sbjct: 421 GHTKGVRALVF--DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNK---- 474
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
S+ S + D +V++W +D T L GH + V+ +K H + + + D + R+
Sbjct: 475 ---SIVSGSADHTVRVWHVDSRT-CYTLRGHTDW-VNHVKIHSASNTIFSASDDTTIRM 528
Score = 61 (26.5 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 373 SPDGY--HLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLY 420
+P+ Y H T + DN +K+WD+ + ++ TQ + GV S+ D +
Sbjct: 633 TPNSYPTHFLTSALDNTIKLWDVATGKCIR--TQF-GHIEGVWSIAADTF 679
Score = 48 (22.0 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 138 HLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCN- 196
H+ S + Y + G T +++ S + +AS ++W + E ++ F G + N
Sbjct: 489 HVDSRTCYTLR-GHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNG 547
Query: 197 -VGAIE 201
+G ++
Sbjct: 548 HIGQVQ 553
Score = 37 (18.1 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 7/38 (18%), Positives = 21/38 (55%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDD 38
M+DD+++ +K+ + ++Q+ A ++ +D +
Sbjct: 287 MTDDDNIKPIKRNDEQQQQQQQQQQGSSQAQSQVLDGE 324
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 198 (74.8 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 59/204 (28%), Positives = 89/204 (43%)
Query: 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAV 211
T +S CSF+ + TAS G C LW V +L+Q+F GH +V ++ P +
Sbjct: 153 TNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 212
Query: 212 CSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP 271
S C D +W + + E HE V+ ++++PSG + D + RL
Sbjct: 213 VS-GGC--DKKAMVWDMRSGQCVQAFETHES-DVNSVRYYPSGDAFASGSDDATCRLYDL 268
Query: 272 LANLE----GHEP--FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
A+ E E F S + F SGR L D++ +WD+ +G V GH V
Sbjct: 269 RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRV 328
Query: 326 YCMSFQGDGSVVATGGLDAFGRVW 349
+ DG+ +G D RVW
Sbjct: 329 STLRVSPDGTAFCSGSWDHTLRVW 352
Score = 181 (68.8 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 283 VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGD--GSVVATG 340
+S F S + T D + LWD+ GQ + GHG V C+ G+ +G
Sbjct: 156 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSG 215
Query: 341 GLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
G D VWD+R+G+C+ E H V SV + P G A+GS+D +++DLR R
Sbjct: 216 GCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR 272
Score = 144 (55.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 52/189 (27%), Positives = 84/189 (44%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPS--GR-FL-GTC-----CWDH 264
+ + + DG+ LW ++ L + GH V + PS G F+ G C WD
Sbjct: 168 ILTASGDGTCALWDVESGQLLQSFHGHGA-DVLCLDLAPSETGNTFVSGGCDKKAMVWD- 225
Query: 265 SWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL--HQEGHG 322
R + E HE V+ ++++PSG + D + RL+DL +EV +E
Sbjct: 226 -MRSGQCVQAFETHES-DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESII 283
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
+ F G ++ G D VWD+ G + L GH V ++ SPDG +G
Sbjct: 284 FGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSG 343
Query: 383 SEDNAVKIW 391
S D+ +++W
Sbjct: 344 SWDHTLRVW 352
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 49/145 (33%), Positives = 64/145 (44%)
Query: 258 GTCC-WD-HSWRLDTPLANLEGHEPFRVSRIKFHPS--GR-FLGTCCWDHSWRLWDLNQG 312
GTC WD S +L L + GH V + PS G F+ C D +WD+ G
Sbjct: 175 GTCALWDVESGQL---LQSFHGHGA-DVLCLDLAPSETGNTFVSGGC-DKKAMVWDMRSG 229
Query: 313 QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR--CIMFLEGHLKSVFSV 370
Q V E H V + + G A+G DA R++DLR R I E + SV
Sbjct: 230 QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV 289
Query: 371 DFSPDGYHLATGSEDNAVKIWDLRK 395
DFS G L G D + +WD+ K
Sbjct: 290 DFSLSGRLLFAGYNDYTINVWDVLK 314
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 197 (74.4 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D+Q + T+S C LW + + TF GH +V ++ P +
Sbjct: 141 GHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAP---DT 196
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ +C D S KLW + + GHE ++ I F P+G T D + RL
Sbjct: 197 RLFVSGAC--DASAKLWDIREGMCRQTFTGHES-DINAICFFPNGNAFATGSDDATCRLF 253
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD + GH
Sbjct: 254 DLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDN 313
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 192 (72.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 61/219 (27%), Positives = 100/219 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + ++ + L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG---TDSRL--LVSASQDGKLIIW----DSYTTNKVHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG ++ D+ + L T N L GH + +S +F + +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGY-LSCCRFLDDNQIV 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ GH V +S D + +G DA ++WD+R G
Sbjct: 159 -TSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
C GH + ++ F P+G ATGS+D +++DLR
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256
Score = 161 (61.7 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 67/250 (26%), Positives = 106/250 (42%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P +VA +C ++++ E V+ R GH + F L V S
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTS 160
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS---WRLD 269
+ D + LW ++ GH V + P R F+ C D S W +
Sbjct: 161 ----SGDTTCALWDIETGQQTTTFAGHTG-DVMSLSLAPDTRLFVSGAC-DASAKLWDIR 214
Query: 270 TPLAN--LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GHE ++ I F P+G T D + RL+DL QE++ H + C
Sbjct: 215 EGMCRQTFTGHES-DINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS-HDN-IIC 271
Query: 328 ----MSFQGDGSVVATGGLDAFGRVWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
++F G ++ G D VWD L+ R + L GH V + + DG +ATG
Sbjct: 272 GITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGV-LAGHDNRVSCLGVTDDGMAVATG 330
Query: 383 SEDNAVKIWD 392
S D+ +KIW+
Sbjct: 331 SWDSFLKIWN 340
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/141 (30%), Positives = 61/141 (43%)
Query: 259 TCC-WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVL 316
TC WD T GH V + P R F+ C D S +LWD+ +G
Sbjct: 165 TCALWDIETGQQT--TTFAGHTG-DVMSLSLAPDTRLFVSGAC-DASAKLWDIREGMCRQ 220
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL--EGHLKSVFSVDFSP 374
GH + + F +G+ ATG DA R++DLR + +M + + + SV FS
Sbjct: 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSK 280
Query: 375 DGYHLATGSEDNAVKIWDLRK 395
G L G +D +WD K
Sbjct: 281 SGRLLLAGYDDFNCNVWDTLK 301
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 288 FHPSGRFLGTCCWDHSWRLWDLN--QGQEVLHQE--GHGKPVYCMSFQGDGSVVATGGLD 343
+ PSG ++ D+ ++ L +G + +E GH + C F D +V + G D
Sbjct: 105 YAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-D 163
Query: 344 AFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRK 395
+WD+ TG+ GH V S+ +PD +G+ D + K+WD+R+
Sbjct: 164 TTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIRE 215
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 197 (74.4 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D+Q + T+S C LW + + TF GH +V ++ P +
Sbjct: 141 GHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP---DT 196
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ +C D S KLW + + GHE ++ I F P+G T D + RL
Sbjct: 197 RLFVSGAC--DASAKLWDVREGMCRQTFTGHES-DINAICFFPNGNAFATGSDDATCRLF 253
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD + GH
Sbjct: 254 DLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN 313
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 195 (73.7 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 68/241 (28%), Positives = 110/241 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + ++ + L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG---TDSRL--LVSASQDGKLIIW----DSYTTNKVHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG ++ D+ + L T N L GH + +S +F + +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY-LSCCRFLDDNQIV 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ GH V +S D + +G DA ++WD+R G
Sbjct: 159 -TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI-GVTS 414
C GH + ++ F P+G ATGS+D +++DLR + L T N I G+TS
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM--TYSHDNIICGITS 275
Query: 415 L 415
+
Sbjct: 276 V 276
Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 68/250 (27%), Positives = 105/250 (42%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P +VA +C ++ + E V+ R GH + F L V S
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTS 160
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS---WRLD 269
+ D + LW ++ GH V + P R F+ C D S W +
Sbjct: 161 ----SGDTTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGAC-DASAKLWDVR 214
Query: 270 TPLAN--LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GHE ++ I F P+G T D + RL+DL QE++ H + C
Sbjct: 215 EGMCRQTFTGHES-DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDN-IIC 271
Query: 328 ----MSFQGDGSVVATGGLDAFGRVWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
+SF G ++ G D VWD L+ R + L GH V + + DG +ATG
Sbjct: 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV-LAGHDNRVSCLGVTDDGMAVATG 330
Query: 383 SEDNAVKIWD 392
S D+ +KIW+
Sbjct: 331 SWDSFLKIWN 340
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/141 (30%), Positives = 61/141 (43%)
Query: 259 TCC-WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVL 316
TC WD T GH V + P R F+ C D S +LWD+ +G
Sbjct: 165 TCALWDIETGQQT--TTFTGHTG-DVMSLSLAPDTRLFVSGAC-DASAKLWDVREGMCRQ 220
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL--EGHLKSVFSVDFSP 374
GH + + F +G+ ATG DA R++DLR + +M + + + SV FS
Sbjct: 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280
Query: 375 DGYHLATGSEDNAVKIWDLRK 395
G L G +D +WD K
Sbjct: 281 SGRLLLAGYDDFNCNVWDALK 301
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 197 (74.4 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D+Q + T+S C LW + + TF GH +V ++ P +
Sbjct: 141 GHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP---DT 196
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ +C D S KLW + + GHE ++ I F P+G T D + RL
Sbjct: 197 RLFVSGAC--DASAKLWDVREGMCRQTFTGHES-DINAICFFPNGNAFATGSDDATCRLF 253
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD + GH
Sbjct: 254 DLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN 313
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 195 (73.7 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 68/241 (28%), Positives = 110/241 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + ++ + L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG---TDSRL--LVSASQDGKLIIW----DSYTTNKVHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG ++ D+ + L T N L GH + +S +F + +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY-LSCCRFLDDNQIV 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ GH V +S D + +G DA ++WD+R G
Sbjct: 159 -TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI-GVTS 414
C GH + ++ F P+G ATGS+D +++DLR + L T N I G+TS
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM--TYSHDNIICGITS 275
Query: 415 L 415
+
Sbjct: 276 V 276
Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 68/250 (27%), Positives = 105/250 (42%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P +VA +C ++ + E V+ R GH + F L V S
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTS 160
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS---WRLD 269
+ D + LW ++ GH V + P R F+ C D S W +
Sbjct: 161 ----SGDTTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGAC-DASAKLWDVR 214
Query: 270 TPLAN--LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GHE ++ I F P+G T D + RL+DL QE++ H + C
Sbjct: 215 EGMCRQTFTGHES-DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDN-IIC 271
Query: 328 ----MSFQGDGSVVATGGLDAFGRVWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
+SF G ++ G D VWD L+ R + L GH V + + DG +ATG
Sbjct: 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV-LAGHDNRVSCLGVTDDGMAVATG 330
Query: 383 SEDNAVKIWD 392
S D+ +KIW+
Sbjct: 331 SWDSFLKIWN 340
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/141 (30%), Positives = 61/141 (43%)
Query: 259 TCC-WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVL 316
TC WD T GH V + P R F+ C D S +LWD+ +G
Sbjct: 165 TCALWDIETGQQT--TTFTGHTG-DVMSLSLAPDTRLFVSGAC-DASAKLWDVREGMCRQ 220
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL--EGHLKSVFSVDFSP 374
GH + + F +G+ ATG DA R++DLR + +M + + + SV FS
Sbjct: 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280
Query: 375 DGYHLATGSEDNAVKIWDLRK 395
G L G +D +WD K
Sbjct: 281 SGRLLLAGYDDFNCNVWDALK 301
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 197 (74.4 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 59/207 (28%), Positives = 90/207 (43%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G T +S C F D+Q + T+S C LW + + TF GH +V ++ P +
Sbjct: 141 GHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP---DT 196
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
+ +C D S KLW + + GHE ++ I F P+G T D + RL
Sbjct: 197 RLFVSGAC--DASAKLWDVREGMCRQTFTGHES-DINAICFFPNGNAFATGSDDATCRLF 253
Query: 270 TPLANLE----GHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
A+ E H+ ++ + F SGR L D + +WD + GH
Sbjct: 254 DLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN 313
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWD 350
V C+ DG VATG D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 195 (73.7 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 68/241 (28%), Positives = 110/241 (45%)
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSR 247
+T RGH + A+ + ++ + L S +QDG + +W D+ N P R S
Sbjct: 49 RTLRGHLAKIYAMHWG---TDSRL--LVSASQDGKLIIW----DSYTTNKVHAIPLRSSW 99
Query: 248 IK---FHPSGRFLGTCCWDHS---WRLDTPLAN------LEGHEPFRVSRIKFHPSGRFL 295
+ + PSG ++ D+ + L T N L GH + +S +F + +
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY-LSCCRFLDDNQIV 158
Query: 296 GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR 355
T D + LWD+ GQ+ GH V +S D + +G DA ++WD+R G
Sbjct: 159 -TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217
Query: 356 CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI-GVTS 414
C GH + ++ F P+G ATGS+D +++DLR + L T N I G+TS
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM--TYSHDNIICGITS 275
Query: 415 L 415
+
Sbjct: 276 V 276
Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 68/250 (27%), Positives = 105/250 (42%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECE-LVQTFR---GHDCNVGAIEFHPLPSEGAVCS 213
C+++P +VA +C ++ + E V+ R GH + F L V S
Sbjct: 103 CAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDNQIVTS 160
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHS---WRLD 269
+ D + LW ++ GH V + P R F+ C D S W +
Sbjct: 161 ----SGDTTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGAC-DASAKLWDVR 214
Query: 270 TPLAN--LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYC 327
+ GHE ++ I F P+G T D + RL+DL QE++ H + C
Sbjct: 215 EGMCRQTFTGHES-DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDN-IIC 271
Query: 328 ----MSFQGDGSVVATGGLDAFGRVWD-LRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
+SF G ++ G D VWD L+ R + L GH V + + DG +ATG
Sbjct: 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGV-LAGHDNRVSCLGVTDDGMAVATG 330
Query: 383 SEDNAVKIWD 392
S D+ +KIW+
Sbjct: 331 SWDSFLKIWN 340
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/141 (30%), Positives = 61/141 (43%)
Query: 259 TCC-WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGR-FLGTCCWDHSWRLWDLNQGQEVL 316
TC WD T GH V + P R F+ C D S +LWD+ +G
Sbjct: 165 TCALWDIETGQQT--TTFTGHTG-DVMSLSLAPDTRLFVSGAC-DASAKLWDVREGMCRQ 220
Query: 317 HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFL--EGHLKSVFSVDFSP 374
GH + + F +G+ ATG DA R++DLR + +M + + + SV FS
Sbjct: 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280
Query: 375 DGYHLATGSEDNAVKIWDLRK 395
G L G +D +WD K
Sbjct: 281 SGRLLLAGYDDFNCNVWDALK 301
WARNING: HSPs involving 1077 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.430 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 471 458 0.00095 118 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1327
No. of states in DFA: 621 (66 KB)
Total size of DFA: 326 KB (2163 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.32u 0.10s 42.42t Elapsed: 00:00:03
Total cpu time: 42.52u 0.11s 42.63t Elapsed: 00:00:03
Start: Thu Aug 15 12:03:11 2013 End: Thu Aug 15 12:03:14 2013
WARNINGS ISSUED: 2