RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11350
(471 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 134 bits (338), Expect = 1e-36
Identities = 61/248 (24%), Positives = 97/248 (39%), Gaps = 24/248 (9%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
+ G +S S P+ H+ +AS K+W V V+TF GH V + +
Sbjct: 94 IRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 153
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
+ +ASC+ D +V++W + A L H I + P +
Sbjct: 154 DGTL-----IASCSNDQTVRVWVVATKECKAELREHRHVVEC-ISWAPESSYSSISEATG 207
Query: 265 SWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
S K G FL + D + ++WD++ G ++ GH
Sbjct: 208 S------------------ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 249
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
V + F G + + D RVWD + RC+ L H V S+DF ++ TGS
Sbjct: 250 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 309
Query: 385 DNAVKIWD 392
D VK+W+
Sbjct: 310 DQTVKVWE 317
Score = 129 bits (323), Expect = 2e-34
Identities = 54/276 (19%), Positives = 103/276 (37%), Gaps = 32/276 (11%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
G P++ F P + +AS K+W + +T +GH +V I F
Sbjct: 15 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 74
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLD 269
A CS + + + + VS + P+G + + D + ++
Sbjct: 75 ASCSADMTIKLWDFQGFECIRTMH------GHDHNVSSVSIMPNGDHIVSASRDKTIKMW 128
Query: 270 TP-----LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
+ GH + + + G + +C D + R+W + + H
Sbjct: 129 EVQTGYCVKTFTGHREWVRMV-RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHV 187
Query: 325 VYCMSFQGD--------------------GSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
V C+S+ + G + +G D ++WD+ TG C+M L GH
Sbjct: 188 VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 247
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
V V F G + + ++D +++WD + +R +K
Sbjct: 248 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK 283
Score = 102 bits (255), Expect = 5e-25
Identities = 51/247 (20%), Positives = 84/247 (34%), Gaps = 29/247 (11%)
Query: 177 KLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
K W +P GH V + FHP+ S + S ++D ++K+W +
Sbjct: 1 KEW-IPRPPEKYALSGHRSPVTRVIFHPVFS-----VMVSASEDATIKVWDYETGDFERT 54
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGH---EPFRVSRIKFHPSGR 293
L+GH H D VS + P+G
Sbjct: 55 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGD 114
Query: 294 FLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRT 353
+ + D + ++W++ G V GH + V + DG+++A+ D RVW + T
Sbjct: 115 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 174
Query: 354 GRCIMFLEGHLKSVFSVDF--------------------SPDGYHLATGSEDNAVKIWDL 393
C L H V + + G L +GS D +K+WD+
Sbjct: 175 KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 234
Query: 394 RKRRLLK 400
L
Sbjct: 235 STGMCLM 241
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 123 bits (309), Expect = 3e-32
Identities = 57/330 (17%), Positives = 99/330 (30%), Gaps = 52/330 (15%)
Query: 111 KERLAKAKEHLHIPEATRTARNQELQKHLTSLSIYCSQV--GDTRPISYCSFSPDSQHVA 168
K ++ A++ ++ N + + + + + G I + DS+ +
Sbjct: 15 KNQIRDARKACADATLSQITNNID---PVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLV 71
Query: 169 TASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSL 228
+AS G +W V V + P + A L + ++K
Sbjct: 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG 131
Query: 229 D---------------------------------------KDTPLANLEGHEPFRVSRIK 249
+ + V +
Sbjct: 132 NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191
Query: 250 FHPSGRFLGTCCWDHSWRL-----DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304
P R + D S +L GHE ++ I F P+G T D +
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD-INAICFFPNGNAFATGSDDATC 250
Query: 305 RL--WDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEG 362
RL +Q + + +SF G ++ G D VWD L G
Sbjct: 251 RLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG 310
Query: 363 HLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
H V + + DG +ATGS D+ +KIW+
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 94.0 bits (232), Expect = 9e-22
Identities = 51/227 (22%), Positives = 85/227 (37%), Gaps = 13/227 (5%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
+T RGH + A+ + L S +QDG + +W + +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSR-----LLVSASQDGKLIIWDSYTTNKVHAIPLRS-SW 99
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSR-------IKFHPSGRFLGT 297
V + PSG ++ D+ + R + T
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVT 159
Query: 298 CCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI 357
D + LWD+ GQ+ GH V +S D + +G DA ++WD+R G C
Sbjct: 160 SSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR 219
Query: 358 MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQ 404
GH + ++ F P+G ATGS+D +++DLR + L +
Sbjct: 220 QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH 266
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 112 bits (281), Expect = 5e-28
Identities = 53/280 (18%), Positives = 102/280 (36%), Gaps = 37/280 (13%)
Query: 146 CSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPL 205
S I FSPD + +AT + L ++W + ++V +GH+ ++ ++++ P
Sbjct: 115 SSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPS 174
Query: 206 PSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
+ S + ++ + + G+++ D +
Sbjct: 175 GDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV------SPGDGKYIAAGSLDRA 228
Query: 266 WR------------LDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ 313
R LD+ + GH+ V + F G+ + + D S +LW+L
Sbjct: 229 VRVWDSETGFLVERLDSENESGTGHKD-SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 287
Query: 314 EVLHQEG------------HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE 361
+ H V ++ + + +G D WD ++G ++ L+
Sbjct: 288 NKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 347
Query: 362 GHLKSVFSVD------FSPDGYHLATGSEDNAVKIWDLRK 395
GH SV SV P+ ATGS D +IW +K
Sbjct: 348 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
Score = 101 bits (250), Expect = 7e-24
Identities = 50/286 (17%), Positives = 88/286 (30%), Gaps = 40/286 (13%)
Query: 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRG------------------H 193
T + FS D +++AT + +++ V + LV
Sbjct: 62 TSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSS 120
Query: 194 DCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPS 253
D + ++ F P A + + ++ + + + S
Sbjct: 121 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS 180
Query: 254 GRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ 313
G T L G+++ D + R+WD G
Sbjct: 181 GSGDRTVRIWDLRTGQCSLTLSIEDGVTT--VAVSPGDGKYIAAGSLDRAVRVWDSETGF 238
Query: 314 -------EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR----------- 355
E GH VY + F DG V +G LD ++W+L+
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 356 -CIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
C + GH V SV + + ++ +GS+D V WD + L
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 344
Score = 62.9 bits (151), Expect = 2e-11
Identities = 16/104 (15%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
Query: 128 RTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELV 187
+ A N+ K S + + +G + + + + +++ + S W +
Sbjct: 284 QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 343
Query: 188 QTFRGHDCNVGAIEFHPLPSEGAVCS-LASCAQDGSVKLWSLDK 230
+GH +V ++ S G + A+ + D ++W K
Sbjct: 344 LMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
Score = 52.5 bits (124), Expect = 5e-08
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 23/123 (18%)
Query: 304 WRLWDLNQGQ----EVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF 359
+ L++ + E+ H V C+ F DG +ATG + +V+ + G +
Sbjct: 40 YILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVAR 98
Query: 360 LEG------------------HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW 401
L + SV FSPDG LATG+ED ++IWD+ R+++
Sbjct: 99 LSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMI 158
Query: 402 CTQ 404
Sbjct: 159 LQG 161
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 97.2 bits (240), Expect = 8e-23
Identities = 47/248 (18%), Positives = 83/248 (33%), Gaps = 12/248 (4%)
Query: 157 YCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLAS 216
+ + S K+W+ + ++T GH V + + ++
Sbjct: 20 ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--------NIII 71
Query: 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLE 276
+ + V + H G+ L
Sbjct: 72 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH 131
Query: 277 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSV 336
+ GR + + +D ++WD + +GH VY + F DG
Sbjct: 132 VLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIH 189
Query: 337 VATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKR 396
V +G LD RVWD+ TG CI L GH ++ + L +G+ D+ VKIWD++
Sbjct: 190 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTG 247
Query: 397 RLLKWCTQ 404
+ L+
Sbjct: 248 QCLQTLQG 255
Score = 92.2 bits (227), Expect = 4e-21
Identities = 47/261 (18%), Positives = 86/261 (32%), Gaps = 22/261 (8%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
C + + V + S ++W + + + GH V +++
Sbjct: 88 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG 147
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
+ S A D VK+W + +T L L+GH G + + D
Sbjct: 148 -------RRVVSGAYDFMVKVWDPETETCLHTLQGHTN---RVYSLQFDGIHVVSGSLDT 197
Query: 265 SWRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHG 322
S R+ + + L + D + ++WD+ GQ + +G
Sbjct: 198 SIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPN 257
Query: 323 KPV-YCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI-----MFLEGHLKSVFSVDFSPDG 376
K Q + + V T D ++WDL+TG I + G V+ + S
Sbjct: 258 KHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK 317
Query: 377 YHLATGSEDNA----VKIWDL 393
A GS + + + D
Sbjct: 318 LVCAVGSRNGTEETKLLVLDF 338
Score = 91.8 bits (226), Expect = 5e-21
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 11/225 (4%)
Query: 179 WTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLE 238
W E + + +GHD +V + + S + D ++K+WS L L
Sbjct: 1 WRRGELKSPKVLKGHDDHVITC-LQFCGN-----RIVSGSDDNTLKVWSAVTGKCLRTLV 54
Query: 239 GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTC 298
GH V + + G+ + + H + + +
Sbjct: 55 GHTG-GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG 113
Query: 299 CWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM 358
D + R+WD+ GQ + GH V C+ + G V +G D +VWD T C+
Sbjct: 114 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETETCLH 171
Query: 359 FLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
L+GH + DG H+ +GS D ++++WD+ + T
Sbjct: 172 TLQGH--TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT 214
Score = 38.6 bits (88), Expect = 0.001
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 10/95 (10%)
Query: 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR-----GHDCNVG 198
+ Q + + + V T+S G KLW + E ++ G V
Sbjct: 250 LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW 309
Query: 199 AIEFHPLPSEGAVCSLASC--AQDGSVKLWSLDKD 231
I VC++ S ++ + + D D
Sbjct: 310 RIRASN---TKLVCAVGSRNGTEETKLLVLDFDVD 341
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 96.8 bits (239), Expect = 8e-23
Identities = 37/288 (12%), Positives = 69/288 (23%), Gaps = 49/288 (17%)
Query: 152 TRPISYCSFSPDSQHVATASWSGLCKLWTV-----PECELVQTFRGHDCNVGAIEFHPLP 206
+ + S ++HV T G K+W + D + + + P
Sbjct: 51 GEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG 109
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 266
V AS + + L +
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169
Query: 267 RLDTPLANLEGHEPF-----------------------------------------RVSR 285
+ L ++
Sbjct: 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFS 229
Query: 286 IKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAF 345
+ + P+G +L + + +N+ + H V + F G + G D
Sbjct: 230 LGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNL 288
Query: 346 GRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
W G I SV S D S D ++ TGS D ++++
Sbjct: 289 LNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 59.8 bits (143), Expect = 2e-10
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 8/123 (6%)
Query: 287 KFHPS--GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDA 344
FH + G+ + + + ++ HG+ V ++ V TGG
Sbjct: 14 SFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KG 72
Query: 345 FGRVWDLRTGRCI-----MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLL 399
+VWD+ + + S PDG L G E + + IWDL
Sbjct: 73 CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR 132
Query: 400 KWC 402
Sbjct: 133 IKA 135
Score = 56.7 bits (135), Expect = 2e-09
Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 321 HGKPVYCMSFQGDGSVVATGG-LDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379
KP Y DG + DA R R I L H + V +V S H+
Sbjct: 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHV 66
Query: 380 ATGSEDNAVKIWDLRKRRLLKWCTQL 405
TG VK+WD+ +QL
Sbjct: 67 YTGG-KGCVKVWDISHPGNKSPVSQL 91
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 94.9 bits (234), Expect = 2e-22
Identities = 46/278 (16%), Positives = 91/278 (32%), Gaps = 48/278 (17%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPL------------- 205
D Q + + K+W E + GH +V +++
Sbjct: 20 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRV 79
Query: 206 --------------------PSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRV 245
+ +C++D S+ +W + T + R
Sbjct: 80 WDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 139
Query: 246 SRIKFHPSGRFLGTCCWDHSWRL--DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 303
+ +++ + D + ++ + + + R + + D++
Sbjct: 140 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 199
Query: 304 WRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG--------- 354
RLWD+ G + EGH + V C+ F + +G D +VWDL
Sbjct: 200 IRLWDIECGACLRVLEGHEELVRCIRFDNK--RIVSGAYDGKIKVWDLVAALDPRAPAGT 257
Query: 355 RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
C+ L H VF + F D + + + S D+ + IWD
Sbjct: 258 LCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293
Score = 77.6 bits (189), Expect = 2e-16
Identities = 31/191 (16%), Positives = 64/191 (33%), Gaps = 4/191 (2%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLA 273
+ S +D ++K+W + L GH V +++ G+
Sbjct: 28 IVSGLRDNTIKIWDKNTLECKRILTGHTG-SVLCLQYDERVIITGSSDSTVRVWDVNTGE 86
Query: 274 NLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK-PVYCMSFQG 332
L + + + + TC D S +WD+ ++ +
Sbjct: 87 MLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF 146
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
D + + D +VW+ T + L GH + + + +GS DN +++WD
Sbjct: 147 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWD 204
Query: 393 LRKRRLLKWCT 403
+ L+
Sbjct: 205 IECGACLRVLE 215
Score = 55.6 bits (132), Expect = 3e-09
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 313 QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDF 372
Q + + K VYC+ + D + +G D ++WD T C L GH SV + +
Sbjct: 6 QRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 63
Query: 373 SP 374
Sbjct: 64 DE 65
Score = 47.9 bits (112), Expect = 1e-06
Identities = 30/171 (17%), Positives = 52/171 (30%), Gaps = 41/171 (23%)
Query: 138 HLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNV 197
+ ++ + G R I+ + + V + S +LW + ++ GH+ V
Sbjct: 164 NTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 221
Query: 198 GAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFL 257
I F + S A DG +K+W L G R
Sbjct: 222 RCIRFDN-------KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRT------------ 262
Query: 258 GTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWD 308
L H RV R++F + + D + +WD
Sbjct: 263 -----------------LVEHS-GRVFRLQFD--EFQIVSSSHDDTILIWD 293
Score = 44.5 bits (103), Expect = 1e-05
Identities = 12/118 (10%), Positives = 31/118 (26%), Gaps = 4/118 (3%)
Query: 288 FHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGR 347
+ + + D++ ++WD N + GH V C+ + + +
Sbjct: 21 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVW 80
Query: 348 VWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQL 405
+ + + S + +WD+ + L
Sbjct: 81 DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRS----IAVWDMASPTDITLRRVL 134
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 88.3 bits (217), Expect = 7e-20
Identities = 30/284 (10%), Positives = 69/284 (24%), Gaps = 44/284 (15%)
Query: 159 SFSPDSQHV-ATASWSGLCKLWTVPECELVQTFR------GHDCNVGAIEFHPLPSEGAV 211
+PD++ + G + C+ ++ + P E
Sbjct: 46 MMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYA 105
Query: 212 CSLASCAQD-------GSVKLWSLDKDTPLANLEGHEPFR-VSRIKFHPSGRFLGTCCWD 263
+ + ++++S + R V ++ G
Sbjct: 106 TVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDI 165
Query: 264 HSWRLDTP--LANLEGHEPFR------------------------VSRIKFHPSGRFLGT 297
+ + T L R + +F + T
Sbjct: 166 YKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT 225
Query: 298 CCWDHSWRLWDLNQGQEVLH-QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ + DL G+ + + G L+ +DL+ +
Sbjct: 226 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRL-AKYDLKQRKL 284
Query: 357 IMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
I + + V F G L G N + +++ +K
Sbjct: 285 IKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVK 327
Score = 68.6 bits (166), Expect = 2e-13
Identities = 32/289 (11%), Positives = 66/289 (22%), Gaps = 52/289 (17%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFR-GHDCNVGAIEFHPLPSEGAVCSLASC 217
+ +++ ++ + V + ++ G P V
Sbjct: 3 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYV----LN 58
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPF-----RVSRIKFHPSGRFLGTCCWDHSWRLD--- 269
G + LD + + P G+ + D
Sbjct: 59 NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV 118
Query: 270 --------------TPLANLEGHEPFR-VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQE 314
+ R V ++ G + +
Sbjct: 119 VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVA 178
Query: 315 VLHQEG----------------------HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR 352
+ + F+ D AT L DL+
Sbjct: 179 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 238
Query: 353 TGRCIMFLEG-HLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
TG+ + F+ SP + G N + +DL++R+L+K
Sbjct: 239 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIK 286
Score = 52.0 bits (123), Expect = 7e-08
Identities = 6/79 (7%), Positives = 16/79 (20%), Gaps = 2/79 (2%)
Query: 328 MSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE-GHLKSVFSVDFSPDGYHL-ATGSED 385
+ + + V D+ + + +PD +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 386 NAVKIWDLRKRRLLKWCTQ 404
+ DL +
Sbjct: 62 GDIYGIDLDTCKNTFHANL 80
Score = 51.3 bits (121), Expect = 1e-07
Identities = 27/231 (11%), Positives = 51/231 (22%), Gaps = 29/231 (12%)
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC--------WD-- 263
+ ++ + + DT + + F P R D
Sbjct: 11 MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD 70
Query: 264 -HSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDL------------- 309
L+++ G + P G+ +
Sbjct: 71 TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA 130
Query: 310 -NQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVF 368
+ + + VY M DGS+ G D++TG+ + L
Sbjct: 131 DGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGP---DIYKMDVKTGKYTVALPLR-NWNR 186
Query: 369 SVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDL 419
+PD + R + L DL
Sbjct: 187 KGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 237
Score = 41.3 bits (95), Expect = 2e-04
Identities = 5/44 (11%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
++ + N + + D+ + K + ++P+ G +
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYK--SCVMPDKFGPGTA 45
Score = 32.8 bits (73), Expect = 0.086
Identities = 5/46 (10%), Positives = 13/46 (28%), Gaps = 2/46 (4%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFR--GHDCNVGAIEF 202
+F + ++ E V+ + G D + +
Sbjct: 298 AFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTPQV 343
Score = 30.1 bits (66), Expect = 0.55
Identities = 10/90 (11%), Positives = 26/90 (28%), Gaps = 7/90 (7%)
Query: 151 DTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGA 210
T SP + + + + +L++ D + F +G
Sbjct: 250 LTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAA-NLDHTYYCVAFDK---KGD 304
Query: 211 VCSLASCAQDGSVKLWSLDKDTPLANLEGH 240
L + +++ D + N++
Sbjct: 305 K--LYLGGTFNDLAVFNPDTLEKVKNIKLP 332
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 85.6 bits (210), Expect = 6e-19
Identities = 33/286 (11%), Positives = 65/286 (22%), Gaps = 45/286 (15%)
Query: 159 SFSPDSQHVATASW----------SGLCKLWTVPECELVQTFRGHDCNVGAIEFHP---- 204
+ D +A AS + +++ D + +P
Sbjct: 53 VVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTS 112
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPF------RVSRIKFHPSGRFLG 258
L +G + +V + L+ L+ + + + G
Sbjct: 113 LTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAK 172
Query: 259 TCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
T + F ++ + L + DL+ G
Sbjct: 173 VAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLP 232
Query: 319 EGHGKPVYCMS----------------------FQGDGSVVATGGLDAFGRVWDLRTGRC 356
+ F V D +TG
Sbjct: 233 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER 292
Query: 357 IMFLEGHLKSVFSVDFSPDGYHL--ATGSEDNAVKIWDLRKRRLLK 400
+ E + S++ S D L A + D + I D L+
Sbjct: 293 LAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR 337
Score = 64.4 bits (155), Expect = 7e-12
Identities = 20/233 (8%), Positives = 49/233 (21%), Gaps = 29/233 (12%)
Query: 146 CSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPL 205
C + T P ++ D A + T E + + +
Sbjct: 150 CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE----VFHPEDEFLINHPAYSQK 205
Query: 206 PSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS 265
+ G + +L + + ++
Sbjct: 206 AGRLVWPT-----YTGKIHQI---------DLSSGDAKFLPAVEALTEAERADGWRPGGW 251
Query: 266 WRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPV 325
++ + + D G E L + G +
Sbjct: 252 QQVA--------YHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG-ERLAKFEMGHEI 302
Query: 326 YCMSFQGDGS--VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG 376
++ D + A D + D +G + + + + G
Sbjct: 303 DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
Score = 47.1 bits (110), Expect = 3e-06
Identities = 19/215 (8%), Positives = 36/215 (16%), Gaps = 48/215 (22%)
Query: 204 PLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD 263
P V A A + + + ++G + G F+
Sbjct: 11 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG---FLPNPVVADDGSFIAHASTV 67
Query: 264 HSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
S + ++D E
Sbjct: 68 FSR----------------------------IARGERTDYVEVFDPVTLLPTADIELPDA 99
Query: 324 PVY---------CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVF------ 368
P + ++ G + V DL L+
Sbjct: 100 PRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPD 159
Query: 369 -SVDFSPDGYHLATGSE-DNAVKIWDLRKRRLLKW 401
DG + +I
Sbjct: 160 TFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDE 194
Score = 44.4 bits (103), Expect = 2e-05
Identities = 14/90 (15%), Positives = 26/90 (28%), Gaps = 12/90 (13%)
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT----------GSE 384
+ A V D GR I ++G + + + DG +A G
Sbjct: 19 NDPAHFAAVTQQFVIDGEAGRVIGMIDGG--FLPNPVVADDGSFIAHASTVFSRIARGER 76
Query: 385 DNAVKIWDLRKRRLLKWCTQLLPNSIGVTS 414
+ V+++D V +
Sbjct: 77 TDYVEVFDPVTLLPTADIELPDAPRFLVGT 106
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 85.7 bits (210), Expect = 9e-19
Identities = 40/298 (13%), Positives = 84/298 (28%), Gaps = 35/298 (11%)
Query: 154 PISYCSFSPDSQHVATASWSGLCKLWTVP--ECELVQTFRGHDCNVGAIEFHPLPSEGAV 211
PIS +++ D +A + ++ + V + H+ V +++ P +
Sbjct: 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN---- 64
Query: 212 CSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD-------- 263
+ +C D + +W+L T L R +R
Sbjct: 65 -RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123
Query: 264 -HSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ---- 318
+++ V + +HP+ L D R++ +
Sbjct: 124 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP 183
Query: 319 --------------EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
V+ + F +GS VA D+ + D + L
Sbjct: 184 WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 243
Query: 365 KSVFSVDFSPDGYHLATGSEDNA-VKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDLYI 421
+ +V F + +A G + + +D +L +P L
Sbjct: 244 LPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF 301
Score = 76.4 bits (186), Expect = 8e-16
Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGR--CIMFLEGHLKSVFSVDFSPDGYHLA 380
+P+ C ++ D + +A + +++ + + L+ H V VD++PD +
Sbjct: 8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67
Query: 381 TGSEDNAVKIWDLRKRRLLKWC 402
T D +W L+ R
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTL 89
Score = 57.9 bits (138), Expect = 9e-10
Identities = 20/121 (16%), Positives = 30/121 (24%), Gaps = 6/121 (4%)
Query: 278 HEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVV 337
E + + F + D L+ + L G S +G +
Sbjct: 241 SETLPLLAVTFITESSLV-AAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARE 299
Query: 338 ATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDG----YHLATGSEDNAVKIWDL 393
LD H SV + G T D + IWD+
Sbjct: 300 RFQNLDKKASSEG-SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 358
Query: 394 R 394
R
Sbjct: 359 R 359
Score = 46.0 bits (107), Expect = 5e-06
Identities = 34/205 (16%), Positives = 54/205 (26%), Gaps = 12/205 (5%)
Query: 120 HLHIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLW 179
+I E + + + FS + VA S L
Sbjct: 169 SAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLA 228
Query: 180 TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEG 239
+ V T + A+ F SL + D L++ D + G
Sbjct: 229 DADKKMAVATLASETLPLLAVTFIT------ESSLVAAGHDCFPVLFTYDSAAGKLSFGG 282
Query: 240 H--EPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRF--- 294
P + S+ RF S A L+ VS+I G+
Sbjct: 283 RLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS 342
Query: 295 -LGTCCWDHSWRLWDLNQGQEVLHQ 318
T D +WD+ + L
Sbjct: 343 QFCTTGMDGGMSIWDVRSLESALKD 367
Score = 45.6 bits (106), Expect = 7e-06
Identities = 31/231 (13%), Positives = 60/231 (25%), Gaps = 24/231 (10%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
+ + + P+S +A S C++++ E+ +
Sbjct: 134 KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 193
Query: 205 LPS----EGAVCSLASC---------AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFH 251
+ G V + + D +V L DK +A E + + F
Sbjct: 194 MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVAT-LASETLPLLAVTFI 252
Query: 252 PSGRFLGTCCWDH----SWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLW 307
+ ++ + G + + R D
Sbjct: 253 TESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARER-FQNLDKKASSE 311
Query: 308 DLNQGQEVLHQEGHGKPVYCMSFQGDG----SVVATGGLDAFGRVWDLRTG 354
L H V +S G S T G+D +WD+R+
Sbjct: 312 GSAAAGAGL-DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 361
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 83.7 bits (205), Expect = 3e-18
Identities = 32/285 (11%), Positives = 64/285 (22%), Gaps = 30/285 (10%)
Query: 155 ISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR---GHDCNVGAIEFHPLPSEGAV 211
IS P + SW G ++ + + F ++ +
Sbjct: 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID-NTDLQI 72
Query: 212 CSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP 271
+ V L L N E +
Sbjct: 73 YVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNY 132
Query: 272 LANLEGHEPFRVSRIKFHPS-------GRFLGTCCWDHSWRLWDLNQGQEVL----HQEG 320
+ + + K L + + + L ++
Sbjct: 133 GDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGL 192
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTG---------------RCIMFLEGHLK 365
+ + A +D V R +
Sbjct: 193 KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252
Query: 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSI 410
V S++FSP L T D + W+L+ R+ +K + +S+
Sbjct: 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSV 297
Score = 66.0 bits (159), Expect = 2e-12
Identities = 30/274 (10%), Positives = 65/274 (23%), Gaps = 26/274 (9%)
Query: 150 GDTRPISYCSFSPDS-QHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSE 208
P+ C+F ++ + + G + Q ++ N+G +
Sbjct: 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDD 113
Query: 209 GAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 268
+ + + D + NL + ++I + ++S
Sbjct: 114 KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQ 173
Query: 269 DTPLANLE---------GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL--- 316
L E G + D + + +
Sbjct: 174 WFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS 233
Query: 317 ------------HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
PV + F + T G D W+L+T + I
Sbjct: 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF- 292
Query: 365 KSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
V + L + D+ K + +
Sbjct: 293 NEDSVVKIACSDNILCLATSDDTFKTNAAIDQTI 326
Score = 58.3 bits (139), Expect = 5e-10
Identities = 23/235 (9%), Positives = 54/235 (22%), Gaps = 23/235 (9%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
++VQ + + I+ P S L + DGS+ ++ D +L ++
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKS-----LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK 56
Query: 245 --VSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 302
+ F + L L + +
Sbjct: 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLI 116
Query: 303 SWRLWDLNQG------------QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWD 350
+ L + + L+ + + S + G ++ + +
Sbjct: 117 AASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFR 176
Query: 351 LRTGRCI----MFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKW 401
L + + A S D V + +
Sbjct: 177 LPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN 231
Score = 57.9 bits (138), Expect = 8e-10
Identities = 6/61 (9%), Positives = 17/61 (27%)
Query: 355 RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTS 414
+ + + + + P L S D ++ ++ + Q L +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 415 L 415
Sbjct: 62 C 62
Score = 52.9 bits (125), Expect = 3e-08
Identities = 8/89 (8%), Positives = 24/89 (26%), Gaps = 4/89 (4%)
Query: 318 QEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE---GHLKSVFSVDFSP 374
++ + + S++ D V+ + L + + +F
Sbjct: 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID 66
Query: 375 D-GYHLATGSEDNAVKIWDLRKRRLLKWC 402
+ + G+ + DL +
Sbjct: 67 NTDLQIYVGTVQGEILKVDLIGSPSFQAL 95
Score = 42.5 bits (98), Expect = 7e-05
Identities = 15/111 (13%), Positives = 35/111 (31%), Gaps = 10/111 (9%)
Query: 132 NQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR 191
N + + P++ FSP + + TA G+ W + + ++ F
Sbjct: 231 NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA 290
Query: 192 GHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP 242
+ + ++ + L D + K + T +E +
Sbjct: 291 KFNEDS-VVKIACSDN-----ILCLATSDDTFKTNAAIDQT----IELNAS 331
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 83.8 bits (205), Expect = 3e-18
Identities = 26/273 (9%), Positives = 52/273 (19%), Gaps = 22/273 (8%)
Query: 148 QVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVP-ECELVQTFRGHDCNVGAIEFHPLP 206
+V + I Y D++ L + F + NV A+
Sbjct: 38 KVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNG 97
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP-------FRVSRIKFHPSGRFLGT 259
V + ++ + F
Sbjct: 98 KFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYV 157
Query: 260 CCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG------- 312
H + ++ E F + L + D
Sbjct: 158 MQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVV 217
Query: 313 QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVW-------DLRTGRCIMFLEGHLK 365
+ G D D R I+ LE +
Sbjct: 218 SKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSIL 277
Query: 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRL 398
+ E + +D++ R++
Sbjct: 278 IYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV 310
Score = 81.1 bits (198), Expect = 3e-17
Identities = 19/275 (6%), Positives = 60/275 (21%), Gaps = 31/275 (11%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
+ + + + A+ + + R + +
Sbjct: 83 ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFI 142
Query: 210 AVCS-----LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDH 264
A ++ ++ ++ A + F + L +
Sbjct: 143 AYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTEN--SHDYAPAFDADSKNLYYLSYRS 200
Query: 265 SWRL------------DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-----WRLW 307
+ + P + K P +D +
Sbjct: 201 LDPSPDRVVLNFSFEVVSKPFVIPLI-PGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPI 259
Query: 308 DLNQGQEVLHQ--EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK 365
+++ G + E + +D++T + +
Sbjct: 260 NVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK----VTEVKN 315
Query: 366 SVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
++ + S D + +D + + L K +
Sbjct: 316 NLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDER 350
Score = 62.6 bits (150), Expect = 3e-11
Identities = 17/229 (7%), Positives = 43/229 (18%), Gaps = 29/229 (12%)
Query: 157 YCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLAS 216
P ++ + E + + + A F +L
Sbjct: 142 IAYGFPLKHGETDGYVMQAIHVYDM-EGRKIFAATTENSHDYAPAFDADS-----KNLYY 195
Query: 217 CAQDGSVKLWSL-------DKDTPLANLEGHEPFRVSRIKFHPSGRFL------GTCCWD 263
+ + + + P + K P +
Sbjct: 196 LSYRSLDPSPDRVVLNFSFEVVSKPFVIPLI-PGSPNPTKLVPRSMTSEAGEYDLNDMYK 254
Query: 264 HSWRLDTPLANLEGHEP-----FRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
S ++ + P S + +D+ +
Sbjct: 255 RSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV---- 310
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSV 367
+ + D V D + L +E + +
Sbjct: 311 TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPL 359
Score = 46.4 bits (108), Expect = 4e-06
Identities = 10/71 (14%), Positives = 20/71 (28%), Gaps = 5/71 (7%)
Query: 333 DGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA--VKI 390
DG ++A + D+ + + V D + I
Sbjct: 14 DGDLIAFVSRGQA-FIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGI 70
Query: 391 WDLRKRRLLKW 401
+D R + K+
Sbjct: 71 YDYRTGKAEKF 81
Score = 40.2 bits (92), Expect = 4e-04
Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 7/94 (7%)
Query: 288 FHPS-GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFG 346
F P G + ++ + D++ + + + + GD V G
Sbjct: 10 FSPLDGDLIAFVSRGQAF-IQDVSGTYVL--KVPEPLRIRYVRRGGDTKVAFIHGTREGD 66
Query: 347 --RVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYH 378
++D RTG+ F E +L +VF++ +G
Sbjct: 67 FLGIYDYRTGKAEKF-EENLGNVFAMGVDRNGKF 99
Score = 34.8 bits (78), Expect = 0.021
Identities = 6/38 (15%), Positives = 13/38 (34%)
Query: 152 TRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQT 189
++ S D + V G + + + E +T
Sbjct: 314 KNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERT 351
Score = 31.4 bits (69), Expect = 0.20
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 366 SVFSVDFSP-DGYHLATGSEDNAVKIWDLRKRRLLK 400
S F+ DFSP DG +A S I D+ +LK
Sbjct: 4 SKFAEDFSPLDGDLIAFVSRGQ-AFIQDVSGTYVLK 38
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 81.9 bits (200), Expect = 9e-18
Identities = 50/267 (18%), Positives = 81/267 (30%), Gaps = 27/267 (10%)
Query: 151 DTRPISYCSFSP--DSQHVATASWSGLCKLWTVPECELVQTF--------RGHDCNVGAI 200
+ ++ FSP SQ++ + SG +W + + + + I
Sbjct: 62 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121
Query: 201 EFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTC 260
+ EG + +D S D L + GH + T
Sbjct: 122 SWDF---EGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTV 178
Query: 261 CWDHSWRLDTPLANLE--------GHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQG 312
D S F SG F+ T D +D G
Sbjct: 179 GDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG 238
Query: 313 QEVLHQEGHGKPVYCMSF---QGDGSVVATGGLDAFGRVWDLRTGRCI--MFLEGHLKSV 367
+ + + E +PV F D AT G DA RVWD+ T +C+ L+
Sbjct: 239 EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN 298
Query: 368 FSVDFSPDG-YHLATGSEDNAVKIWDL 393
V G + + S D + ++L
Sbjct: 299 QQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 66.5 bits (160), Expect = 1e-12
Identities = 46/303 (15%), Positives = 83/303 (27%), Gaps = 30/303 (9%)
Query: 139 LTSLSIYCSQVGDTRPISYC-SFSPDSQHVATASW-SGLCKLWTV--PECELVQTFRGHD 194
++ I Q R + S+ P + +A S + + V F GH
Sbjct: 3 ISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHG 62
Query: 195 CN-VGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHE-------PFRVS 246
+ V ++F P+ L S + G V +W D ++E + +S
Sbjct: 63 SSVVTTVKFSPIKGSQY---LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPIS 119
Query: 247 RIKFHPSGRFLGTCCWDHSWRL-------DTPLANLEGHEPFRVSRIKFHPSGRFLGTCC 299
I + GR L L + GH + T
Sbjct: 120 DISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVG 179
Query: 300 WDHSWRLWDLNQGQEVLHQE---GHGKPVYCMSFQGDGSVVATGGLDAFGRVW----DLR 352
D S + + G V + F D
Sbjct: 180 DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE 239
Query: 353 TGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGV 412
+ I + ++ D AT D +++WD+ + ++ T L +G
Sbjct: 240 FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT-LDKQQLGN 298
Query: 413 TSL 415
+
Sbjct: 299 QQV 301
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 81.4 bits (199), Expect = 1e-17
Identities = 24/243 (9%), Positives = 46/243 (18%), Gaps = 16/243 (6%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+ SPD + +A +L + + + LA
Sbjct: 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS---RRKAFEAPRQITMLAWAR 144
Query: 219 QDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGH 278
+ D V + E
Sbjct: 145 DGSKLYGLGRDLHVMDP----EAGTLVEDKPIQSWEAETYAQPDVLAVWNQH-----ESS 195
Query: 279 EPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ-EVLHQEGHGKPVYCMSFQGDGSVV 337
+ DL G+ + + + +
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255
Query: 338 ATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRR 397
+DL I + S +SV+ S DG + G + +D
Sbjct: 256 FGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312
Query: 398 LLK 400
Sbjct: 313 KKG 315
Score = 51.7 bits (122), Expect = 7e-08
Identities = 30/277 (10%), Positives = 61/277 (22%), Gaps = 45/277 (16%)
Query: 165 QHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVK 224
++ + + + + + D + P A+ + S+
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIA--YATVNKSESLV 59
Query: 225 LWSLDKDTPLANLEGHEPFRVSR----IKFHPSGRFLGTCCWDHS-------------WR 267
L L ++ P + P G+ L
Sbjct: 60 KIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119
Query: 268 LDTPLANLEGHEPF--RVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVL--------- 316
D + +++ + + G L D + E
Sbjct: 120 YDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAET 179
Query: 317 ------------HQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMF-LEGH 363
H+ + + D DL TG M +
Sbjct: 180 YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239
Query: 364 LKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
FS +P N ++ +DL K +K
Sbjct: 240 DVFYFSTAVNPAKTRAFG--AYNVLESFDLEKNASIK 274
Score = 31.7 bits (70), Expect = 0.19
Identities = 3/89 (3%), Positives = 23/89 (25%), Gaps = 8/89 (8%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
+ +P + + + + + ++ + ++ +G
Sbjct: 238 IMDVFYFSTAVNPAKTRAFG--AYNVLESFDLEKNASIKRV-PLPHSYYSVNVST---DG 291
Query: 210 AVCSLASCAQDGSVKLWSLDKDTPLANLE 238
+ + G + + + ++
Sbjct: 292 ST--VWLGGALGDLAAYDAETLEKKGQVD 318
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 79.9 bits (195), Expect = 3e-17
Identities = 30/255 (11%), Positives = 70/255 (27%), Gaps = 11/255 (4%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPS 207
+ + SP + A+ G ++W T L T V I +
Sbjct: 56 EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK 115
Query: 208 EGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR 267
A + + L + +
Sbjct: 116 RIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFE 175
Query: 268 LDTPLANLEGHEPFR-VSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV-------LHQE 319
E + V ++++P G + D + L++ G + L
Sbjct: 176 GPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNV 235
Query: 320 GHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK-SVFSVDFSPDGYH 378
H V+ +++ DG+ +A+ D ++W++ T + + + +
Sbjct: 236 AHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 295
Query: 379 LATGSEDNAVKIWDL 393
L + S + + +
Sbjct: 296 LVSISANGFINFVNP 310
Score = 72.6 bits (176), Expect = 1e-14
Identities = 42/257 (16%), Positives = 83/257 (32%), Gaps = 21/257 (8%)
Query: 159 SFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCA 218
+P + + + + V + + H + P + AS
Sbjct: 24 GNTPAGDKIQYCNGTSV-YTVPVGSLTDTEIYTEHSHQTTVAKTSP-----SGYYCASGD 77
Query: 219 QDGSVKLW--SLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS------WRLDT 270
G+V++W + + S R + T
Sbjct: 78 VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT 137
Query: 271 PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSF 330
NL G S + + D++ +++ + H K V+ + +
Sbjct: 138 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRY 197
Query: 331 QGDGSVVATGGLDAFGRVWDLRTGRCI-------MFLEGHLKSVFSVDFSPDGYHLATGS 383
DGS+ A+ G D +++ G + H SVF + +SPDG +A+ S
Sbjct: 198 NPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 257
Query: 384 EDNAVKIWDLRKRRLLK 400
D +KIW++ ++ K
Sbjct: 258 ADKTIKIWNVATLKVEK 274
Score = 55.3 bits (131), Expect = 5e-09
Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSE 384
+ G + + + + H SP GY+ A+G
Sbjct: 20 AVVLGNTPAGDKIQYCNGTSV-YTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV 78
Query: 385 DNAVKIWDLRKRRLLKWC 402
V+IWD + +
Sbjct: 79 HGNVRIWDTTQTTHILKT 96
Score = 47.2 bits (110), Expect = 2e-06
Identities = 14/126 (11%), Positives = 37/126 (29%), Gaps = 2/126 (1%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
+ T+ + ++PD A+ G L+ + F A
Sbjct: 182 KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSV 241
Query: 205 LPSEGAVCS--LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW 262
+ +AS + D ++K+W++ + ++ + + L +
Sbjct: 242 FGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA 301
Query: 263 DHSWRL 268
+
Sbjct: 302 NGFINF 307
Score = 46.4 bits (108), Expect = 4e-06
Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 6/95 (6%)
Query: 136 QKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGH-D 194
K V + + ++SPD +A+AS K+W V ++ +T
Sbjct: 222 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 281
Query: 195 CNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLD 229
+ +L S + +G + + +
Sbjct: 282 IEDQQLGIIWTKQ-----ALVSISANGFINFVNPE 311
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 77.7 bits (189), Expect = 2e-16
Identities = 36/294 (12%), Positives = 79/294 (26%), Gaps = 56/294 (19%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFR-GHDCNVGAIEFHPLPSE 208
G + I+ S S D + + +A G W + + F H + I+
Sbjct: 10 GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS---- 65
Query: 209 GAVCSLASCAQDGSVKLWSLD-KDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWR 267
L + + D +K+ + ++ + +
Sbjct: 66 --KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIA 123
Query: 268 LDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK---- 323
+ + E + S + +F+ D ++ L+ +
Sbjct: 124 IYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEIT 183
Query: 324 ------------------------------------------PVYCMSFQGDGSVVATGG 341
V C+S+ D +ATG
Sbjct: 184 SVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGS 243
Query: 342 LDAFGRVWDLRTGRC--IMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
LD VW++ I+ H S + + + + +D+ +K W++
Sbjct: 244 LDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 59.2 bits (141), Expect = 2e-10
Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 4/94 (4%)
Query: 313 QEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIM-FLEGHLKSVFSVD 371
+V + GH K + +S DG + + + WD+ TG F + H + +
Sbjct: 5 DQVRY--GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 372 FSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQL 405
+ L T S D+ +K+ +
Sbjct: 63 TTSK-GDLFTVSWDDHLKVVPAGGSGVDSSKAVA 95
Score = 56.1 bits (133), Expect = 2e-09
Identities = 10/47 (21%), Positives = 19/47 (40%)
Query: 354 GRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
G GH K++ ++ S DG L + + + WD+ +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNR 48
Score = 51.5 bits (121), Expect = 7e-08
Identities = 39/278 (14%), Positives = 68/278 (24%), Gaps = 52/278 (18%)
Query: 185 ELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFR 244
+ Q GH+ + A+ +L S +G + W +
Sbjct: 3 SIDQVRYGHNKAITALSSSADGK-----TLFSADAEGHINSWDISTGISNRVFPDVHATM 57
Query: 245 VSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 304
++ IK G DH + + ++ + +
Sbjct: 58 ITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAA 117
Query: 305 RLWDLNQGQEVLHQ-EGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGH 363
+ C++ D VA GG D+ V+ L
Sbjct: 118 CYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV 177
Query: 364 LKS----------------------------------------------VFSVDFSPDGY 377
+ V V +SPD
Sbjct: 178 HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV 237
Query: 378 HLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
LATGS DN+V +W++ K + V S+
Sbjct: 238 RLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSV 275
Score = 32.3 bits (71), Expect = 0.11
Identities = 5/33 (15%), Positives = 8/33 (24%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVP 182
+ + +A K W VP
Sbjct: 266 AHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 75.0 bits (183), Expect = 2e-15
Identities = 21/283 (7%), Positives = 54/283 (19%), Gaps = 45/283 (15%)
Query: 160 FSPDSQHVATASW----------SGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
A AS + +++ + D ++
Sbjct: 72 AGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRV--HII 129
Query: 210 AVCS-----LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS------RIKFHPSGRFLG 258
C+ L + S+ + + F +
Sbjct: 130 GNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAA 189
Query: 259 TCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQ 318
+ A G + + + G +
Sbjct: 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAI 249
Query: 319 EGHGKPVYCMSFQGDGSVVATGGLDAFG-------------------RVWDLRTGRCIMF 359
+G+ +F+ G + + G G+
Sbjct: 250 DGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP 309
Query: 360 LEGHLKSVFSVDFSPDGYHL--ATGSEDNAVKIWDLRKRRLLK 400
+ ++ + DG A + + I+D +
Sbjct: 310 ISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 73.7 bits (179), Expect = 8e-15
Identities = 33/306 (10%), Positives = 75/306 (24%), Gaps = 58/306 (18%)
Query: 158 CSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS---- 213
+ + VAT S+SG + + + + ++ +
Sbjct: 73 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 132
Query: 214 ------LASCAQDGSVKLWSLDKDTPLANLEGHE-----------------PFRVSRIKF 250
L + G+ +W +N + +
Sbjct: 133 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI 192
Query: 251 HPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPS------------------- 291
G + T + + ++ + + + +
Sbjct: 193 SERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHD 251
Query: 292 -GRFLGTCCWDHSWRLW------DLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDA 344
F ++ + + Q L + H V +SF G + + G D
Sbjct: 252 SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG 311
Query: 345 FGRVWDLRTGRCIMFLEGHLKSV----FSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLK 400
R WD++T I L H + + G LA + + + +
Sbjct: 312 KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA 371
Query: 401 WCTQLL 406
+ L
Sbjct: 372 DLNESL 377
Score = 70.7 bits (171), Expect = 7e-14
Identities = 28/251 (11%), Positives = 59/251 (23%), Gaps = 67/251 (26%)
Query: 187 VQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVS 246
+ HD ++ ++ SC+ DG +K+W + V
Sbjct: 7 ANAGKAHDADIFSVSACNS-------FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVH 59
Query: 247 RIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL 306
+ H H + + + T +
Sbjct: 60 KSGLH--------------------------HVDVLQAIERDAFELCLVATTSFSGDLLF 93
Query: 307 WDLNQGQE----------VLHQEGHGKPVYCMSFQGDG-----SVVATGGLDAFGRVWDL 351
+ + + E +L + + + + + + +W
Sbjct: 94 YRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKF 153
Query: 352 RTG------------------RCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+ + SVD S G +ATG + V+I +L
Sbjct: 154 HPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGL-IATGFNNGTVQISEL 212
Query: 394 RKRRLLKWCTQ 404
R L
Sbjct: 213 STLRPLYNFES 223
Score = 48.7 bits (114), Expect = 8e-07
Identities = 11/79 (13%), Positives = 28/79 (35%), Gaps = 2/79 (2%)
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSLLTDL 419
+ H +FSV + S D +K+WD + + + + + L
Sbjct: 10 GKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVD 67
Query: 420 YIDVLESLNPGIGNIISSA 438
+ +E + + +++
Sbjct: 68 VLQAIERDAFELCLVATTS 86
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 72.7 bits (177), Expect = 9e-15
Identities = 25/298 (8%), Positives = 60/298 (20%), Gaps = 69/298 (23%)
Query: 160 FSPDSQHVATASW----------SGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEG 209
+PD + A+ + + ++ + + + +
Sbjct: 24 IAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFS 83
Query: 210 AV-CSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCC------- 261
A L + + +D + E V +P+G T
Sbjct: 84 ADGKRLYVANITPAASVTVIDAVSKKMLSEIDTAACVL---AYPAGDDRFTALCESGKAL 140
Query: 262 --WDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW---DHSWRLWDLNQGQEVL 316
+ + + + R+ G + + R D + +
Sbjct: 141 TVTLDANGKEAKRTMSDAFIDVDKDPAFVNA-SRYKGDYLFTTYGGNVRSADFSGDKPAF 199
Query: 317 HQ--EGHGKPVYCMSFQGDGSVVATGGLDAFG---------------------------- 346
+ ++ G
Sbjct: 200 GKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSK 259
Query: 347 --RVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL--ATGSEDNAVKIWDLRKRRLLK 400
+ + L S+ S D L + + V + D R L
Sbjct: 260 QRVARWDLAQQKVEPLV-------SIQVSEDDKPLFYGLTATSDLV-VMDARTGALQH 309
Score = 55.8 bits (133), Expect = 3e-09
Identities = 19/201 (9%), Positives = 39/201 (19%), Gaps = 30/201 (14%)
Query: 226 WSLDKDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS-------------WRLDT 270
+ D D L ++G + P + S T
Sbjct: 1 YVYDADAKKLLGQIDGGFGPGFA---IAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTT 57
Query: 271 --PLANLEGHEPFRVSRIKFHPS-----GRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGK 323
+ + + G+ L + + ++ + + E
Sbjct: 58 LDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEIDTA 117
Query: 324 PVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI---MFLEGHLKSVFSVDFSPDGY--H 378
GD A V G+ M + Y
Sbjct: 118 ACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGD 177
Query: 379 LATGSEDNAVKIWDLRKRRLL 399
+ V+ D +
Sbjct: 178 YLFTTYGGNVRSADFSGDKPA 198
Score = 48.8 bits (115), Expect = 7e-07
Identities = 23/222 (10%), Positives = 42/222 (18%), Gaps = 31/222 (13%)
Query: 159 SFSPDSQHV-ATASWSG----LCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
P SG + E + + D + + +G
Sbjct: 121 LAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGD--- 177
Query: 214 LASCAQDGSVKLWSLDKDTP--LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTP 271
G+V+ D P + P G +
Sbjct: 178 YLFTTYGGNVRSADFSGDKPAFGKPWSLL-TDAERAEGWRPGGMQQTAVQAKQNRYYVLM 236
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ 331
+G P + Q+V +P+ +
Sbjct: 237 HKGTDGSHK--------DPGTQVWVYDLKSKQRVARWDLAQQKV-------EPLVSIQVS 281
Query: 332 GDG--SVVATGGLDAFGRV-WDLRTGRCIMFLEGHLKSVFSV 370
D V D RTG + + +
Sbjct: 282 EDDKPLFYGLTATS--DLVVMDARTGALQHVEKQIGNTSSLL 321
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 71.5 bits (173), Expect = 2e-14
Identities = 29/285 (10%), Positives = 63/285 (22%), Gaps = 52/285 (18%)
Query: 150 GDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP----- 204
G + I+ + +P + + S+ G W + H + +++
Sbjct: 11 GHNKGITALTVNP----LISGSYDGRIMEW-----SSSSMHQDHSNLIVSLDNSKAQEYS 61
Query: 205 ----------------------------LPSEGAVCSLASCAQDGSVKLWSLDKDTPLAN 236
AV + + K L +
Sbjct: 62 SISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNS 121
Query: 237 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLG 296
+ + + L +P +S
Sbjct: 122 PGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD 181
Query: 297 TCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQG--------DGSVVATGGLDAFGRV 348
+ L + +VATG LD +
Sbjct: 182 VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 241
Query: 349 WDLRT-GRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWD 392
+ ++ + I L H V ++ + L + D +K W+
Sbjct: 242 YSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWN 285
Score = 55.4 bits (131), Expect = 4e-09
Identities = 32/280 (11%), Positives = 71/280 (25%), Gaps = 64/280 (22%)
Query: 183 ECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEP 242
E+++T GH+ + A+ +P L S + DG + WS + H
Sbjct: 2 HDEVLKTISGHNKGITALTVNP---------LISGSYDGRIMEWSSSS-----MHQDHSN 47
Query: 243 FRVSRIKFHPSGRFLGTCCWDHSWRLDTPLAN---------------------------- 274
+ + + + D
Sbjct: 48 -LIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLIL 106
Query: 275 --------LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVY 326
S + + +G + + +
Sbjct: 107 QSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPS 166
Query: 327 CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLK-----------SVFSVDFSPD 375
+S + +A G + ++DL++ + + +
Sbjct: 167 YISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIE 226
Query: 376 GYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGVTSL 415
+ATGS D + I+ +++ K L + GV +L
Sbjct: 227 EDLVATGSLDTNIFIYSVKRPM--KIIKALNAHKDGVNNL 264
Score = 29.5 bits (64), Expect = 0.71
Identities = 5/42 (11%), Positives = 13/42 (30%), Gaps = 1/42 (2%)
Query: 140 TSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTV 181
+ I + ++ + S + ++ K W V
Sbjct: 246 RPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 71.5 bits (173), Expect = 3e-14
Identities = 27/266 (10%), Positives = 69/266 (25%), Gaps = 19/266 (7%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
T + +++ T S +W +P+ V
Sbjct: 89 VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE 148
Query: 205 LPSEGAVCSL----------------ASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRI 248
S + D ++ +W + + L L GH R+
Sbjct: 149 ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH-TDRIYST 207
Query: 249 KFHPSGRFLGTCCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWD 308
+ + + D + R+ + + + +
Sbjct: 208 IYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRG 267
Query: 309 LNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCI-MFLEGHLKSV 367
+ H + ++ + G + +++LR+G+ + + +
Sbjct: 268 WDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQI 327
Query: 368 FSVDFSPDGYHLATGSEDNAVKIWDL 393
+SV+F +A +D + L
Sbjct: 328 WSVNFKGKTL-VAAVEKDGQSFLEIL 352
Score = 66.8 bits (161), Expect = 1e-12
Identities = 39/321 (12%), Positives = 96/321 (29%), Gaps = 68/321 (21%)
Query: 157 YCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP------------ 204
+ +V T + + +++ + + GHD V A+++
Sbjct: 16 ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRT 75
Query: 205 --------------------------LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLE 238
+ + + + ++D ++ +W L K++ + +
Sbjct: 76 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHG 135
Query: 239 GHEPFRVSRIKFHPSGRFLGTCCW--------------------DHSWRLDTPLANLEGH 278
+ + + F+G D++ + +
Sbjct: 136 EEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLY 195
Query: 279 E----PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
R+ + + + D + R+WDL G+ + +GH V +
Sbjct: 196 ILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKF 255
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLR 394
V A G + + + H F L +GS +N I++LR
Sbjct: 256 LVSAAADGSIRGWDANDYSRKFSYH---HTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 311
Query: 395 KRRLLKWCTQLLPNSIGVTSL 415
+L+ +L ++ + S+
Sbjct: 312 SGKLVH--ANILKDADQIWSV 330
Score = 66.1 bits (159), Expect = 2e-12
Identities = 22/127 (17%), Positives = 41/127 (32%), Gaps = 3/127 (2%)
Query: 275 LEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDG 334
L GH ++ ++ T D R++D + +L GH V+ + + G
Sbjct: 8 LRGHMTSVITC--LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG 65
Query: 335 SVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL-ATGSEDNAVKIWDL 393
+V+ + +F + TGS DN + +W L
Sbjct: 66 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 125
Query: 394 RKRRLLK 400
K +
Sbjct: 126 PKESSVP 132
Score = 61.1 bits (146), Expect = 9e-11
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 319 EGHGKPVY-CMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY 377
GH V C+ F + + V TG D RV+D + ++ L GH V+++ ++ G
Sbjct: 9 RGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI 66
Query: 378 HLATGSEDNAVKIWDLRKRRLLKWCTQ 404
L +GS D V++WD++K
Sbjct: 67 -LVSGSTDRTVRVWDIKKGCCTHVFEG 92
Score = 30.2 bits (66), Expect = 0.56
Identities = 11/116 (9%), Positives = 28/116 (24%), Gaps = 9/116 (7%)
Query: 157 YCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLAS 216
S + + + + F H N+ AI + ++
Sbjct: 244 ALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSD-----NILV 298
Query: 217 CAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLD 269
+ +++L + + ++ + F D LD
Sbjct: 299 SGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVA-AVEKDGQSFLEILD 353
Score = 27.9 bits (60), Expect = 2.5
Identities = 7/36 (19%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 144 IYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLW 179
++ + + D I +F + VA G L
Sbjct: 316 VHANILKDADQIWSVNFKGKTL-VAAVEKDGQSFLE 350
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 60.3 bits (144), Expect = 1e-10
Identities = 25/244 (10%), Positives = 49/244 (20%), Gaps = 3/244 (1%)
Query: 159 SFSPDSQHV-ATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
SPD V + S + ++ T G +S
Sbjct: 38 VISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASST 97
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEG 277
++ K + + T ++ G
Sbjct: 98 LSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG 157
Query: 278 HEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVV 337
P ++ S N + + E + V
Sbjct: 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVT 217
Query: 338 ATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL-ATGSEDNAVKIWDLRKR 396
+ D T + + + +PDG + S N V + D
Sbjct: 218 NVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATN 276
Query: 397 RLLK 400
+
Sbjct: 277 TITA 280
Score = 42.6 bits (98), Expect = 6e-05
Identities = 17/193 (8%), Positives = 44/193 (22%), Gaps = 6/193 (3%)
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD----HSWRLDTP 271
+ ++ ++ + + + A + P G + T
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGS--NPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 272 LANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQ 331
+ P G+ + S V GK ++
Sbjct: 65 NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALS 124
Query: 332 GDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNAVKIW 391
DG + + ++ +S + +PDG + + D+
Sbjct: 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISV 184
Query: 392 DLRKRRLLKWCTQ 404
+ +
Sbjct: 185 IDTVTNSVIDTVK 197
Score = 32.9 bits (73), Expect = 0.075
Identities = 13/115 (11%), Positives = 30/115 (26%), Gaps = 14/115 (12%)
Query: 145 YCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHP 204
I+ + + + ++ + I P
Sbjct: 195 TVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTP 253
Query: 205 LPSEGAVCSLASCAQDGSVKLWSLDKDTPLANLE-GHEPFRVSRIKFHPSGRFLG 258
+G + + +V + +T A + G P + SG+F+G
Sbjct: 254 ---DGKKV-YVALSFCNTVSVIDTATNTITATMAVGKNP--------YASGQFIG 296
>d2dk4a1 a.140.6.1 (A:8-70) Pre-mRNA-splicing factor 18 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 63
Score = 51.8 bits (124), Expect = 1e-09
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 70 ERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEEYSLAKAKERLAKAKEHLHIPEATR 128
E + ++ +V LR+ GEPI LFGE + A +RL K + + PE +
Sbjct: 8 ELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGE--TDYDAFQRLRKIE--ILTPEVNK 62
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 54.8 bits (131), Expect = 1e-08
Identities = 22/143 (15%), Positives = 34/143 (23%), Gaps = 12/143 (8%)
Query: 265 SWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKP 324
SW++ + P + + F T L D + E+ G
Sbjct: 10 SWKVHVAPEDR----PTQQM-NDWDLENLFSVTLRDAGQIALIDGSTY-EIKTVLDTGYA 63
Query: 325 VYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLE-----GHLKSVFSVDFSPDG-YH 378
V+ G + G D + DL E S + Y
Sbjct: 64 VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYA 123
Query: 379 LATGSEDNAVKIWDLRKRRLLKW 401
+A I D K
Sbjct: 124 IAGAYWPPQYVIMDGETLEPKKI 146
Score = 54.0 bits (129), Expect = 2e-08
Identities = 32/257 (12%), Positives = 62/257 (24%), Gaps = 26/257 (10%)
Query: 160 FSPDSQHV-ATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS----- 213
+ ++ A A W + E + E+HP P A+ +
Sbjct: 116 EGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP 175
Query: 214 --LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWD-----HSW 266
+ + + G + L L E + S R+ T
Sbjct: 176 EFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVID 235
Query: 267 RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWD----LNQGQEVLHQEGHG 322
+ L +E + + + + D L H +
Sbjct: 236 TKEGKLVAIEDT-GGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAW 294
Query: 323 KPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATG 382
K + G GS+ ++ T L + SV D +
Sbjct: 295 KILDSFPALGGGSL-FIKTHPNSQYLYVDAT------LNPEAEISGSV-AVFDIKAMTGD 346
Query: 383 SEDNAVKIWDLRKRRLL 399
D K + + +
Sbjct: 347 GSDPEFKTLPIAEWAGI 363
Score = 53.6 bits (128), Expect = 2e-08
Identities = 26/258 (10%), Positives = 62/258 (24%), Gaps = 24/258 (9%)
Query: 160 FSPDSQHVATASWSGLCKLWTV--PECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
S +++ G + + E V + +IE + ++A
Sbjct: 69 LSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK-IGSEARSIETSKMEGWEDKYAIAGA 127
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRL-----DTP- 271
+ + P ++HP R + +T
Sbjct: 128 YWPPQYVIMDGETLEPKKIQSTRGM-TYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 186
Query: 272 --LANLEGHEPFRVSRI---------KFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEG 320
L + + + I S R+ T + + + +++ E
Sbjct: 187 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED 246
Query: 321 HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLR---TGRCIMFLEGHLKSVFSVDFSPDGY 377
G + G + A + D G + + + G
Sbjct: 247 TGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGG 306
Query: 378 HLATGSEDNAVKIWDLRK 395
L + N+ ++
Sbjct: 307 SLFIKTHPNSQYLYVDAT 324
Score = 49.8 bits (118), Expect = 4e-07
Identities = 23/205 (11%), Positives = 44/205 (21%), Gaps = 25/205 (12%)
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDTPLANLE 276
G + L L+ + V + SGR+L D L
Sbjct: 41 AGQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV 98
Query: 277 -----GHEPFRVSRIK-FHPSGRFL-GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
G E + K ++ W + + D + Q G
Sbjct: 99 AEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQE 158
Query: 330 FQGDGSV------------VATGGLDAFGRVWDLRTGRCIMFLEGHL-KSVFSVDFSPDG 376
+ + V + + D + E + +
Sbjct: 159 YHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSH 218
Query: 377 YHLATGSEDNAVKIWDLRKRRLLKW 401
+ T + + K L
Sbjct: 219 RYFITAANARNKLVVIDTKEGKLVA 243
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 54.2 bits (129), Expect = 2e-08
Identities = 39/290 (13%), Positives = 76/290 (26%), Gaps = 50/290 (17%)
Query: 160 FSPDSQHVATASWSGLCKLW--TVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASC 217
S +++ + E V + ++E ++A
Sbjct: 69 MSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI-EARSVESSKFKGYEDRYTIAGA 127
Query: 218 AQDGSVKLWSLDKDTPLANLEGHEP----------FRVSRI-------KFHPSGRFLGTC 260
+ + P + RV+ I +F + + G
Sbjct: 128 YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 187
Query: 261 CWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGR--FLGTCCWDHSWRLWDLNQGQEVLHQ 318
+ +D G PF ++ + S R + + ++ L
Sbjct: 188 LLVNYKDIDNLTVTSIGAAPF-LADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 246
Query: 319 EG--------------HGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHL 364
G PV+ S GDGS+ G + + + L+G
Sbjct: 247 VGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP---KNHPQYAWKKVAELQGQG 303
Query: 365 KSVFSVDFSPDGYHLA-------TGSEDNAVKIWDLRKRRLLKWCTQLLP 407
+ P HL +V ++DL+ L Q+LP
Sbjct: 304 GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN---LDAKYQVLP 350
Score = 48.0 bits (113), Expect = 1e-06
Identities = 8/71 (11%), Positives = 24/71 (33%), Gaps = 11/71 (15%)
Query: 322 GKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLAT 381
++ ++ + G + + D + + + ++ +V S G +L
Sbjct: 30 LPNLFSVTLRDAGQI----------ALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLV 78
Query: 382 GSEDNAVKIWD 392
D + + D
Sbjct: 79 IGRDARIDMID 89
Score = 47.6 bits (112), Expect = 2e-06
Identities = 22/186 (11%), Positives = 47/186 (25%), Gaps = 15/186 (8%)
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHS---WRLDT------ 270
G + L D + ++ V + SGR+L D L
Sbjct: 41 AGQIALVDGDSKKIVKVIDTGY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV 98
Query: 271 -PLANLEGHEPFRVSRIKFHPSGRFL-GTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCM 328
+ R+ W + + D + G V
Sbjct: 99 AEIKIGIEARSVES-SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQ 157
Query: 329 SFQGDGSVVATGGLDAFGRVW-DLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDNA 387
++ + V A +++ ++ + +V LA G D++
Sbjct: 158 TYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSS 217
Query: 388 VKIWDL 393
+ +
Sbjct: 218 HRYFMT 223
Score = 47.3 bits (111), Expect = 2e-06
Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 16/171 (9%)
Query: 266 WRLDT--PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQ-----EVLHQ 318
D+ + ++ V + SGR+L D + DL + E+
Sbjct: 47 VDGDSKKIVKVIDTGY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG 104
Query: 319 EGHGKPVYCMSFQGDGS-VVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGY 377
+ +A + D T + +V + + P+
Sbjct: 105 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPR 164
Query: 378 -HLATGSEDNAVKIWDLRKRRLLKW-----CTQLLPNSIGVTSLLTDLYID 422
S ++ I ++++ + L SIG L D D
Sbjct: 165 VAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWD 215
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 46.4 bits (108), Expect = 4e-06
Identities = 22/267 (8%), Positives = 56/267 (20%), Gaps = 28/267 (10%)
Query: 155 ISYCSFSPDSQHV-ATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCS 213
+ SPD +++ + + + TF G++ +G
Sbjct: 39 VQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVF 98
Query: 214 LASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTC----CWDHSWRLD 269
+ S D P R L + +
Sbjct: 99 VGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVS 158
Query: 270 TPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMS 329
+ + P + ++ HG +
Sbjct: 159 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQT 218
Query: 330 FQGDGSVVATGGLDAFGRV-------------------WDLRTGRCIMFLEGHL---KSV 367
+ A + + + ++ EG
Sbjct: 219 LDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQP 278
Query: 368 FSVDFSPDGYHL-ATGSEDNAVKIWDL 393
+ G +L A G + + + ++++
Sbjct: 279 RGFNVDHSGKYLIAAGQKSHHISVYEI 305
Score = 41.0 bits (94), Expect = 2e-04
Identities = 16/128 (12%), Positives = 41/128 (32%), Gaps = 12/128 (9%)
Query: 216 SCAQDGSVKLWSLDKDTPLANLEGHE-PFRVSRIKFHPSGRFLGTCCWD----HSWRLDT 270
+ + + +W+L+ + L + + P +V + P R+L ++R+
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 271 ----PLANLEGHEPFRVSRIKFHPSGRFLGTCCWD---HSWRLWDLNQGQEVLHQEGHGK 323
E P ++ I G+F+ ++ S + V+
Sbjct: 69 DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD 128
Query: 324 PVYCMSFQ 331
+ +
Sbjct: 129 GCHSANIS 136
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 42.5 bits (99), Expect = 8e-05
Identities = 29/253 (11%), Positives = 69/253 (27%), Gaps = 30/253 (11%)
Query: 147 SQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLP 206
+++ PIS+ +F + +++ A+ +F + P
Sbjct: 34 TEIPQDEPISWMTFDHERKNIYGAAMKK------------WSSFA-VKSPTEIVHEASHP 80
Query: 207 SEGAVCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW 266
G + + ++ L + A P+ V F+ + +
Sbjct: 81 IGGHPRANDADTNTRAIFLLA-------AK---QPPYAVYANPFYKFAGYGNVFSVSETG 130
Query: 267 RLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCW--DHSWRLWDLNQGQ----EVLHQEG 320
+L+ + N E E + + F P+ +L + + W L G+ +
Sbjct: 131 KLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD 190
Query: 321 HGKPVYCMSFQGDGSVV-ATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHL 379
G ++ G+ + A + + + H +
Sbjct: 191 PGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPET 250
Query: 380 ATGSEDNAVKIWD 392
G V
Sbjct: 251 GKGLYRADVCALT 263
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 36.3 bits (82), Expect = 0.005
Identities = 17/178 (9%), Positives = 41/178 (23%), Gaps = 17/178 (9%)
Query: 232 TPLANLEGHEPFRVSRIKFHPSGRFL-------GTCCWDHSWRLDTPLANLEGHEPFRVS 284
T + F P G + +R++ N +
Sbjct: 84 TYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPAT 143
Query: 285 RIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVATGGLDA 344
I F R +G ++ + + E + +
Sbjct: 144 HILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHR 203
Query: 345 FGRVWDLRTGRCIMFLE---------GHLKSVFSVDFSPDGYHLATGSEDNAVKIWDL 393
+ D+ I + + + DG + S+ ++ I++
Sbjct: 204 IYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILF-SKGGSIYIFNP 260
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 36.6 bits (83), Expect = 0.005
Identities = 17/138 (12%), Positives = 40/138 (28%), Gaps = 10/138 (7%)
Query: 260 CCWDHSWRLDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEV---- 315
C+ ++ + V + + + +D+ ++
Sbjct: 156 YCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKK 215
Query: 316 ----LHQEGHGKPVYCMSFQGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVD 371
+ G + + +VA G V+ G+ M + + ++
Sbjct: 216 VWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI-EVFGPDGGQPKMRIRCPFEKPSNLH 274
Query: 372 FSPDGYHL-ATGSEDNAV 388
F P + T E+NAV
Sbjct: 275 FKPQTKTIFVTEHENNAV 292
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 35.9 bits (81), Expect = 0.010
Identities = 49/456 (10%), Positives = 103/456 (22%), Gaps = 81/456 (17%)
Query: 2 SDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKD 61
D + +Y ++ N + + + E N D+ + S D
Sbjct: 25 ISDHEYLYKQENNILVF-NAEYGNSSVFLENSTFDEFGHSINDYSIS-----------PD 72
Query: 62 KQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEEYSLAKAKERLAKAKEHL 121
Q +L E+ K+ RH S + +L + + + +
Sbjct: 73 GQFILLEYNYVKQWRH---SYTASYDIYDLNK--------RQLITEERIPNNTQWVTWSP 121
Query: 122 HIPEATRTARNQELQKHLTSLSIYCSQVGDTRPISYCSFSPDSQHVATASWSGLCKLWTV 181
+ N K +L Y I Y + +S LW
Sbjct: 122 VGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE--EEVFSAYSALWWS 179
Query: 182 PECELVQTFRGHDCNVGAIEFHPLPSEGAVCS---------LASCAQDGSVKLWSLDKDT 232
P + + +D V IE+ E + + + D +
Sbjct: 180 PNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLS 239
Query: 233 PLANLEGHEP----------FRVSRIKFHPSGRFLGTCCWDH----------------SW 266
+ N + + + + R W
Sbjct: 240 SVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRW 299
Query: 267 RLDTPLANLEGHEPFRVSR-------IKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQE 319
++E V R + + + + ++
Sbjct: 300 NCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFI 359
Query: 320 GHGKPVYCMSFQGDGSVV---ATGGLDAFGR-------VWDLRTGRCI-MFLEGHLKSVF 368
G + + G + D C+ L +
Sbjct: 360 TKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYY 419
Query: 369 SVDFSPDGYHLA---TGSEDNAVKIWDLRKRRLLKW 401
SV FS + + +G + + L+
Sbjct: 420 SVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRV 455
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 33.3 bits (76), Expect = 0.064
Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 15/70 (21%)
Query: 329 SFQGDGSVVATGGLDAFGRVWDLRTGRC---------------IMFLEGHLKSVFSVDFS 373
+F G G+ T +D+ W++ + + GH + +
Sbjct: 318 TFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRD 377
Query: 374 PDGYHLATGS 383
DG L S
Sbjct: 378 ADGKWLVVLS 387
Score = 33.0 bits (75), Expect = 0.087
Identities = 17/155 (10%), Positives = 40/155 (25%), Gaps = 22/155 (14%)
Query: 269 DTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSW-RLWDLNQGQEVLHQE-GHGKPVY 326
D N + H P +S G++L ++ L+ + + + ++
Sbjct: 61 DQQYLNGDCHHP-HISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIH 119
Query: 327 CMSFQGDGS---VVATGG----LDAFGRVWDLRTGRCI--------MFLEGHL---KSVF 368
+ Q V G + L + M + + ++
Sbjct: 120 GLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLD 179
Query: 369 SVDFSPDGYHLATGSED-NAVKIWDLRKRRLLKWC 402
+ D G + + + R W
Sbjct: 180 NTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWV 214
Score = 29.9 bits (67), Expect = 0.74
Identities = 25/181 (13%), Positives = 47/181 (25%), Gaps = 19/181 (10%)
Query: 160 FSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGAVCSLASCAQ 219
S + + E E + G + P A+
Sbjct: 225 AVKAGNFKTIGD-SKVPVVDGRGESEFTRYIPVPKNPHG---LNTSPDGKYFI--ANGKL 278
Query: 220 DGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDTPLANLEGHE 279
+V + ++DK L E R + + G +D T L +
Sbjct: 279 SPTVSVIAIDKLDDL--FEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTL----FID 332
Query: 280 PFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSFQGDGSVVAT 339
+V + + + ++ + D V +Q GH S DG +
Sbjct: 333 S-QVCKWNIADAIKHYNGDRVNYIRQKLD------VQYQPGHNHASLTESRDADGKWLVV 385
Query: 340 G 340
Sbjct: 386 L 386
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 32.5 bits (72), Expect = 0.090
Identities = 23/246 (9%), Positives = 50/246 (20%), Gaps = 40/246 (16%)
Query: 151 DTRPISYCSFSPDSQHVATASWSGLCKLWTVPECELVQTFRGHDCNVGAIEFHPLPSEGA 210
+P+ ++SPD +A ++ + G V + H
Sbjct: 37 SPQPLMSPAWSPDGSKLAYVTFE-----SGRSALVIQTLANGAVRQVASFPRHN------ 85
Query: 211 VCSLASCAQDGSVKLWSLDKDTPLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLDT 270
+ + DGS ++L K + D
Sbjct: 86 --GAPAFSPDGSKLAFALSKTGS------------LNLYVMDLASGQIRQVTDGRSNNTE 131
Query: 271 PLANLEGHEPFRVSRIKFHPSGRFLGTCCWDHSWRLWDLNQGQEVLHQEGHGKPVYCMSF 330
P + S P + + + Q M
Sbjct: 132 PTWFPDSQNLAFTSDQAGRP--QVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVS 189
Query: 331 QGDGSVVATGGLDAFGRVWDLRTGRCIMFLEGHLKSVFSVDFSPDGYHLATGSEDN---A 387
G + + + + +P+G + S
Sbjct: 190 SNGG----------QQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSV 239
Query: 388 VKIWDL 393
+ +
Sbjct: 240 LNLVST 245
>d1j5sa_ c.1.9.8 (A:) Uronate isomerase TM0064 {Thermotoga maritima
[TaxId: 2336]}
Length = 451
Score = 28.8 bits (64), Expect = 1.7
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 9/67 (13%)
Query: 360 LEGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCTQLLPNSIGV-TSLLTD 418
+ L F++ SE+ A +IW+ K++L + Q L + V TD
Sbjct: 102 IHLDLWRRFNIKKVI--------SEETAEEIWEETKKKLPEMTPQKLLRDMKVEILCTTD 153
Query: 419 LYIDVLE 425
+ LE
Sbjct: 154 DPVSTLE 160
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 27.3 bits (59), Expect = 3.5
Identities = 6/43 (13%), Positives = 16/43 (37%)
Query: 361 EGHLKSVFSVDFSPDGYHLATGSEDNAVKIWDLRKRRLLKWCT 403
EG V + + + ++ ++I+D R ++
Sbjct: 19 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGE 61
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Length = 493
Score = 26.8 bits (59), Expect = 5.6
Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 11/109 (10%)
Query: 27 KRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARH----VNVST 82
KR+ + D+ +K + + I+ + + +L + + + V+
Sbjct: 255 KRVEGISALRDESDKD------GMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVAL 308
Query: 83 DDNQVK-LNLRQLGEPICLFGEEYSLAKAKERLAKAKEHLHIPEATRTA 130
Q K +NL+ + E + L KA++ HI EA A
Sbjct: 309 HHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVA 357
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.135 0.425
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,815,252
Number of extensions: 85771
Number of successful extensions: 643
Number of sequences better than 10.0: 1
Number of HSP's gapped: 384
Number of HSP's successfully gapped: 137
Length of query: 471
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 382
Effective length of database: 1,185,626
Effective search space: 452909132
Effective search space used: 452909132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.9 bits)