BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11351
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96JK2|DCAF5_HUMAN DDB1- and CUL4-associated factor 5 OS=Homo sapiens GN=DCAF5 PE=1
SV=2
Length = 942
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 144/193 (74%), Gaps = 5/193 (2%)
Query: 14 GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73
GND+ VI HD+ S + +D + HE VYGLSV P D IFAS+ DDGRVL++D R
Sbjct: 120 GNDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 74 ELAVNSGP--FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG---SCESCMSI 128
+ + P FH+VMFNPVE RL+ATANSK+G+ L+D RKP+ L++YG S +S MS+
Sbjct: 180 PFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSV 239
Query: 129 RFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS 188
RFN GTQLL LRRRLPPVLY+ S PV QFD++GY+NSCTMKSCCFAG +D+Y++SGS
Sbjct: 240 RFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGS 299
Query: 189 DDFVLYMWRVPRD 201
DDF LYMWR+P D
Sbjct: 300 DDFNLYMWRIPAD 312
>sp|Q80T85|DCAF5_MOUSE DDB1- and CUL4-associated factor 5 OS=Mus musculus GN=Dcaf5 PE=1
SV=2
Length = 946
Score = 241 bits (616), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 144/193 (74%), Gaps = 5/193 (2%)
Query: 14 GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73
GND+ VI HD+ S + +D + HE VYGLSV P D IFAS+ DDGRVL++D R
Sbjct: 120 GNDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 74 ELAVNSGP--FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG---SCESCMSI 128
+ + P FH+VMFNPVE RL+ATANSK+G+ L+D RKP+ L++YG S +S MS+
Sbjct: 180 PFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSV 239
Query: 129 RFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS 188
RFN GTQLL LRRRLPPVLY+ S PV QFD++GY+NSCTMKSCCFAG +D+Y++SGS
Sbjct: 240 RFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGS 299
Query: 189 DDFVLYMWRVPRD 201
DDF LYMW++P D
Sbjct: 300 DDFNLYMWKIPAD 312
>sp|Q5U2M6|DCAF8_RAT DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus GN=Dcaf8
PE=2 SV=1
Length = 591
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP-----FHAVMFNP 89
H+ + L+++P F SA +D V D R A++L V + + NP
Sbjct: 276 HKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEKKVGLYTIYVNP 335
Query: 90 VEARLVATANSKDGIALYDTRKPKE-----VLMQYG-----SCESCMSIR---FNKAGTQ 136
A + +YD RK E VL ++ + ES +I ++ GT+
Sbjct: 336 ANTHQFAVGGRDQFVRIYDQRKIDENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTE 395
Query: 137 LLGLRRRLPPVLYNTRSSSPVAQF--DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLY 194
LL L+N+ S S AQ+ ++G+ N+ T+K F G + E+VVSGSD ++
Sbjct: 396 LLASYNDEDIYLFNS-SHSDGAQYIKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIF 454
Query: 195 MW 196
+W
Sbjct: 455 LW 456
>sp|Q5R448|DCAF8_PONAB DDB1- and CUL4-associated factor 8 OS=Pongo abelii GN=DCAF8 PE=2
SV=1
Length = 597
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 21/182 (11%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP-----FHAVMFNP 89
H+ + L+++P F SA +D V D R A++L V + + NP
Sbjct: 282 HKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEKKVGLYTIYVNP 341
Query: 90 VEARLVATANSKDGIALYDTRKPKE-----VLMQY-------GSCESCMS-IRFNKAGTQ 136
A + +YD RK E VL ++ G ++ ++ + ++ GT+
Sbjct: 342 ANTHQFAVGGRDQFVRIYDQRKIDENENNGVLKKFCPHHLVNGESKANITCLVYSHDGTE 401
Query: 137 LLGLRRRLPPVLYNTRSSSPVAQF--DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLY 194
LL L+N+ S S AQ+ ++G+ N+ T+K F G + E+VVSGSD ++
Sbjct: 402 LLASYNDEDIYLFNS-SHSDGAQYVKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIF 460
Query: 195 MW 196
+W
Sbjct: 461 LW 462
>sp|Q5TAQ9|DCAF8_HUMAN DDB1- and CUL4-associated factor 8 OS=Homo sapiens GN=DCAF8 PE=1
SV=1
Length = 597
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP-----FHAVMFNP 89
H+ + L+++P F SA +D V D R A++L V + + NP
Sbjct: 282 HKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEKKVGLYTIYVNP 341
Query: 90 VEARLVATANSKDGIALYDTRKPKE-----VLMQYG-----SCESCMSIR---FNKAGTQ 136
A + +YD RK E VL ++ + ES +I ++ GT+
Sbjct: 342 ANTHQFAVGGRDQFVRIYDQRKIDENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTE 401
Query: 137 LLGLRRRLPPVLYNTRSSSPVAQF--DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLY 194
LL L+N+ S S AQ+ ++G+ N+ T+K F G + E+VVSGSD ++
Sbjct: 402 LLASYNDEDIYLFNS-SHSDGAQYVKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIF 460
Query: 195 MW 196
+W
Sbjct: 461 LW 462
>sp|Q8N7N5|DCAF8_MOUSE DDB1- and CUL4-associated factor 8 OS=Mus musculus GN=Dcaf8 PE=1
SV=1
Length = 591
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP-----FHAVMFNP 89
H+ + L+++P F SA +D V D R A++L V + + NP
Sbjct: 276 HKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEKKVGLYTIYVNP 335
Query: 90 VEARLVATANSKDGIALYDTRKPKE-----VLMQYG-----SCESCMSIR---FNKAGTQ 136
A + +YD RK E VL ++ + ES +I ++ GT+
Sbjct: 336 ANTHQFAVGGRDQYVRIYDQRKIDENENNGVLKKFCPHHLVNSESKANITCLVYSHDGTE 395
Query: 137 LLGLRRRLPPVLYNTRSSSPVAQF--DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLY 194
LL L+N+ S S AQ+ ++G+ N+ T+K F G + E+VVSGSD ++
Sbjct: 396 LLASYNDEDIYLFNS-SHSDGAQYIKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIF 454
Query: 195 MW 196
+W
Sbjct: 455 LW 456
>sp|O22468|MSI2_ARATH WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana
GN=MSI2 PE=2 SV=1
Length = 415
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 36/189 (19%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARL 94
HE + +S + +F SA +DGR++++DTR+ + ++ V+ + + FNP +
Sbjct: 216 HESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWV 275
Query: 95 VATANSKDGIALYDTRK-----------------------PKEVLMQYGSCESCMSIRFN 131
+ATA+S +AL+D RK + VL G M N
Sbjct: 276 LATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLN 335
Query: 132 KAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE--YVVSGSD 189
+ G + L + + P F H G+ K FA ++E + S ++
Sbjct: 336 RVGEEQLEIE-------LDAEDGPPELLFSHGGH----KAKISDFAWNKNEPWVIASVAE 384
Query: 190 DFVLYMWRV 198
D L +W++
Sbjct: 385 DNSLQVWQM 393
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 34 LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATE-LAVNSGPFHAVMFNPVEA 92
+HER V LS +P + + A+A D V LFD R ++ + G V ++P
Sbjct: 258 VHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHE 317
Query: 93 RLVATANSKDGIALYDTRK---------------PKEVLMQYGSCESCMS-IRFNK 132
++A++ + ++D + P E+L +G ++ +S +NK
Sbjct: 318 TVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNK 373
>sp|P0C7V8|DC8L2_HUMAN DDB1- and CUL4-associated factor 8-like protein 2 OS=Homo sapiens
GN=DCAF8L2 PE=2 SV=1
Length = 602
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP-----FHAVMFNP 89
H P + L+++P F ++ +D V D R A+++ V + + NP
Sbjct: 288 HRGPAHKLALEPDSPYKFLTSGEDAVVFTIDLRQDRPASKVVVTRENDKKVGLYTITVNP 347
Query: 90 VEARLVATANSKDGIALYDTRK--PKE---VLMQYG-----SCESCMSIR---FNKAGTQ 136
A + +YD RK KE VL ++ +C+ +I ++ GT+
Sbjct: 348 ANTYQFAVGGQDQFVRIYDQRKIDKKENNGVLKKFTPHHLVNCDFPTNITCVVYSHDGTE 407
Query: 137 LLGLRRRLPPVLYNTRSSSPVAQFDH--EGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLY 194
LL L+N+ S S AQ+ +G+ N+ T+K F G + E+VVSGSD ++
Sbjct: 408 LLASYNDDDIYLFNS-SHSDGAQYSKRFKGHRNNTTVKGVNFYGPRSEFVVSGSDCGHIF 466
Query: 195 MW 196
W
Sbjct: 467 FW 468
>sp|Q6NRH1|DCAF8_XENLA DDB1- and CUL4-associated factor 8 OS=Xenopus laevis GN=dcaf8 PE=2
SV=1
Length = 601
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP-----FHAVMFNP 89
H+ + L+++P F SA +D V D R A+ L V + + NP
Sbjct: 285 HKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASRLVVTKEKESKVGLYTIYVNP 344
Query: 90 VEARLVATANSKDGIALYDTRKPKE-----VLMQYG-----SCESCMSIR---FNKAGTQ 136
A + +YD RK E VL ++ + E+ +I ++ G++
Sbjct: 345 ANTYQFAVGGRDQFVRIYDQRKINENVNNGVLKKFCPHHLVTSEAKANITCLVYSHDGSE 404
Query: 137 LLGLRRRLPPVLYNTRSSSPVAQF--DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLY 194
LL L+N+ S S A++ ++G+ N+ T+K F G + E+VVSGSD ++
Sbjct: 405 LLASYNDEDIYLFNS-SHSDGAEYIKRYKGHRNNATVKGVNFYGPRSEFVVSGSDCGHIF 463
Query: 195 MW 196
+W
Sbjct: 464 LW 465
>sp|Q5U4F6|WDR34_MOUSE WD repeat-containing protein 34 OS=Mus musculus GN=Wdr34 PE=2 SV=2
Length = 535
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 29 PIDFYL--HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVM 86
P+ F H PVY +S P +F SA DG V L+ + T L ++ AV
Sbjct: 382 PVQFTFSPHGGPVYSVSCSPFHRNLFLSAGTDGHVHLYSMLQAQPLTSLQLSHKYLFAVR 441
Query: 87 FNPVEARLVATANSKDGIALYD----TRKPKEVLMQYGSCESCMSIRFNKAGTQLLG 139
++PV + A A+ + + L+D ++KP + Q + FN TQLL
Sbjct: 442 WSPVRPLVFAAASGEGDVQLFDLQKSSQKPTVSITQTQDGSPVYCLEFNSQQTQLLA 498
>sp|Q6NLV4|FY_ARATH Flowering time control protein FY OS=Arabidopsis thaliana GN=FY
PE=1 SV=1
Length = 647
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 49 DAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYD 108
D F S DD V ++D + + L + +V ++P ++ LV+ + + L+D
Sbjct: 219 DLKFCSCSDDTTVKVWDFTKCVDESSLTGHGWDVKSVDWHPTKSLLVSGGKDQL-VKLWD 277
Query: 109 TRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNS 168
TR +E+ +G +S+++N+ G LL + LY+ R+ + F G+
Sbjct: 278 TRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSF--RGHTKD 335
Query: 169 CTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIYV 205
T S + +EY VSGS D + W V ++ +
Sbjct: 336 VT--SLAWHPCHEEYFVSGSSDGSICHWIVGHENPQI 370
>sp|Q96EX3|WDR34_HUMAN WD repeat-containing protein 34 OS=Homo sapiens GN=WDR34 PE=1 SV=2
Length = 536
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVE 91
F H P+Y +S P +F SA DG V L+ T L ++ AV ++PV
Sbjct: 388 FSPHGGPIYSVSCSPFHRNLFLSAGTDGHVHLYSMLQAPPLTSLQLSLKYLFAVRWSPVR 447
Query: 92 ARLVATANSKDGIALYD----TRKPKEVLMQYGSCESCMSIRFNKAGTQLLG 139
+ A A+ K + L+D ++KP ++ Q + FN TQLL
Sbjct: 448 PLVFAAASGKGDVQLFDLQKSSQKPTVLIKQTQDESPVYCLEFNSQQTQLLA 499
>sp|O94244|HAT2_SCHPO Histone acetyltransferase type B subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mis16 PE=1 SV=1
Length = 430
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTR--SREEATE-LAVNSGPFHAVMFN 88
++ H V + P +A+ AS DD + + DTR EEA + + +S +AV N
Sbjct: 231 YHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAIN 290
Query: 89 PVEARLVATANSKDGIALYDTRKPKEVLMQY-GSCESCMSIRFNKAGTQLLG---LRRRL 144
P L+ATA++ +AL+D R P + L G + + ++ +L RR+
Sbjct: 291 PFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRV 350
Query: 145 ----------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVV-SGSDDFVL 193
+ SP F H G+ N + S C + +VV S +DD +L
Sbjct: 351 CIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEFSWC---PNERWVVGSLADDNIL 407
Query: 194 YMWRVPR 200
+W R
Sbjct: 408 QIWSPSR 414
>sp|O22469|MSI3_ARATH WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana
GN=MSI3 PE=1 SV=2
Length = 424
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 37/197 (18%)
Query: 28 DPIDFYL-HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVM 86
+P+ Y H+ + ++ + IF SA DD +++++D R+ + ++ V+ + +
Sbjct: 209 NPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLS 268
Query: 87 FNPVEARLVATANSKDGIALYDTRK---PKEVLMQY--------------------GSCE 123
FNP ++ATA+S +AL+D RK P VL ++ G
Sbjct: 269 FNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDR 328
Query: 124 SCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE- 182
M N+ G + L + + P F H G+ K FA +DE
Sbjct: 329 RLMVWDINRVGDEQLEIE-------LDAEDGPPELLFSHGGH----KAKISDFAWNKDEP 377
Query: 183 YVVSG-SDDFVLYMWRV 198
+V+S ++D L +W++
Sbjct: 378 WVISSVAEDNSLQVWQM 394
>sp|Q61Y48|LIN53_CAEBR Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae
GN=lin-53 PE=3 SV=2
Length = 416
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVE 91
F HE V ++ D +F S DD ++L++D R+ + +S + + FNP
Sbjct: 218 FKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYS 277
Query: 92 ARLVATANSKDGIALYDTRKPKEVLMQYGSC-ESCMSIRFNKAGTQLL---GLRRRL--- 144
++AT ++ +AL+D R + L + S + ++++ +L G +RL
Sbjct: 278 EFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Query: 145 -------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE-YVV-SGSDDFVLYM 195
+ P F H G+ T K F+ +E +VV S S+D +L +
Sbjct: 338 DLSKIGEDQTAEDAEDGPPELLFIHGGH----TAKISDFSWNPNEPWVVCSVSEDNILQV 393
Query: 196 WRVPRDDIY 204
W++ D+IY
Sbjct: 394 WQMA-DNIY 401
>sp|P90916|LIN53_CAEEL Probable histone-binding protein lin-53 OS=Caenorhabditis elegans
GN=lin-53 PE=1 SV=2
Length = 417
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 21/193 (10%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVE 91
F HE V ++ D +F S DD ++L++D R+ + +S + + FNP
Sbjct: 218 FKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYS 277
Query: 92 ARLVATANSKDGIALYDTRKPKEVLMQYGSC-ESCMSIRFNKAGTQLL---GLRRRL--- 144
++AT ++ +AL+D R + L + S + ++++ +L G +RL
Sbjct: 278 EFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVW 337
Query: 145 -------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE--YVVSGSDDFVLYM 195
+ P F H G+ T K F+ +E V S S+D +L +
Sbjct: 338 DLSKIGEDQSAEDAEDGPPELLFIHGGH----TAKISDFSWNPNEPWVVCSVSEDNILQV 393
Query: 196 WRVPRDDIYVSSD 208
W++ D+IY D
Sbjct: 394 WQMA-DNIYNEVD 405
>sp|Q28I90|DCAF8_XENTR DDB1- and CUL4-associated factor 8 OS=Xenopus tropicalis GN=dcaf8
PE=2 SV=1
Length = 604
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 21/182 (11%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP-----FHAVMFNP 89
H+ + L+++ F SA +D V D R A+ L V + + NP
Sbjct: 288 HKGASHKLALERDSPCTFLSAGEDAVVFTIDLRQDRPASRLVVTKEKEKKVGLYTIYVNP 347
Query: 90 VEARLVATANSKDGIALYDTRKPKE-----VLMQYG-----SCESCMSIR---FNKAGTQ 136
A + +YD RK E VL ++ + E+ +I ++ G++
Sbjct: 348 ANTYQFAVGGRDQFVRIYDQRKINENVNNGVLKKFCPHHLVTSEAKANITCLVYSHDGSE 407
Query: 137 LLGLRRRLPPVLYNTRSSSPVAQF--DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLY 194
LL L+N+ S S A++ ++G+ N+ T+K F G + E+VVSGSD ++
Sbjct: 408 LLASYNDEDIYLFNS-SHSDGAEYIKRYKGHRNNATVKGVNFYGPRSEFVVSGSDCGHIF 466
Query: 195 MW 196
+W
Sbjct: 467 LW 468
>sp|A6NGE4|DC8L1_HUMAN DDB1- and CUL4-associated factor 8-like protein 1 OS=Homo sapiens
GN=DCAF8L1 PE=2 SV=1
Length = 600
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP-----FHAVMFNP 89
H P + L+++P F ++ +D V D R A+++ V + + NP
Sbjct: 285 HRGPAHELALEPDSPYKFLTSGEDAVVFTIDLRQDRPASKVVVTRENDKKVGLYTISMNP 344
Query: 90 VEARLVATANSKDGIALYDTRK--PKE---VLMQYGS-----CESCMSIR---FNKAGTQ 136
A + +YD R+ KE VL ++ C+ +I ++ GT+
Sbjct: 345 ANIYQFAVGGHDQFVRIYDQRRIDKKENNGVLKKFTPHHLVYCDFPTNITCVVYSHDGTE 404
Query: 137 LLGLRRRLPPVLYNTRSSSPVAQF--DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLY 194
LL L+N+ S S AQ+ ++G+ N+ T+K F G + E+VVSGSD ++
Sbjct: 405 LLASYNDEDIYLFNS-SLSDGAQYVKRYKGHRNNDTIKCVNFYGPRSEFVVSGSDCGHVF 463
Query: 195 MW 196
W
Sbjct: 464 FW 465
>sp|O22467|MSI1_ARATH Histone-binding protein MSI1 OS=Arabidopsis thaliana GN=MSI1 PE=1
SV=1
Length = 424
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 20/194 (10%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRS---REEATELAVNSGPFHAVMFN 88
F HE V ++ + +F S DD +L++D RS + + +S + + FN
Sbjct: 223 FKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFN 282
Query: 89 PVEARLVATANSKDGIALYDTRKPKEVLMQYGS-CESCMSIRFNKAGTQLLG---LRRRL 144
P +VAT ++ + L+D RK L + S E + +N +L L RRL
Sbjct: 283 PFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRL 342
Query: 145 ----------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLY 194
+ + P F H G+ + + + +D + S ++D +L
Sbjct: 343 MVWDLSRIDEEQTVEDAEDGPPELLFIHGGH--TSKISDFSWNPCEDWVISSVAEDNILQ 400
Query: 195 MWRVPRDDIYVSSD 208
+W++ ++IY D
Sbjct: 401 IWQMA-ENIYHDED 413
>sp|Q2HJ56|PWP1_BOVIN Periodic tryptophan protein 1 homolog OS=Bos taurus GN=PWP1 PE=2
SV=1
Length = 500
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARL 94
H V LS + + ASA D V+L+D + A LAV++ + F+P EA+
Sbjct: 254 HTDAVLDLSWNKLVRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQT 313
Query: 95 VATANSKDGIALYDTRKPKE 114
+ + + +ALYD R P+E
Sbjct: 314 LISGSYDKSVALYDCRSPEE 333
Score = 34.3 bits (77), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 8 KVLRVIGNDDHVISHDMASGDPI-DFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDT 66
VL D+ VI DM+ G P +H V L P + S D V L+D
Sbjct: 269 NVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQTLISGSYDKSVALYDC 328
Query: 67 RSREEATELAVNSGPFHAVMFN 88
RS EE+ + SG V +N
Sbjct: 329 RSPEESHRMWRFSGQIERVTWN 350
>sp|Q99J09|MEP50_MOUSE Methylosome protein 50 OS=Mus musculus GN=Wdr77 PE=1 SV=1
Length = 342
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 12 VIGNDDHVIS-HDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR 69
V G+ D I D+A ++ Y H V ++ P +D++F S +D R+LL+DTR
Sbjct: 141 VSGSKDCCIKIWDLAQQVSLNSYRAHAGQVTCVAASPHKDSVFLSCSEDSRILLWDTRCP 200
Query: 70 EEATELAVNSGPF--HAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMS 127
+ A+++A N+ + A+ ++P ++ + + ++L DT+ L +
Sbjct: 201 KPASQMACNASGYLPTALAWHPQQSEVFVFGDENGSVSLVDTKNASCTLSSAVHSQGVTR 260
Query: 128 IRFNKAGTQLL 138
+ F+ LL
Sbjct: 261 LVFSPHSVPLL 271
>sp|O74340|DCA13_SCHPO Protein sof1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sof1 PE=3 SV=1
Length = 436
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 47 SQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIAL 106
++ ++ ASA D ++++D R+ T+L + +++ +NP+EA + + +
Sbjct: 198 TETSVLASAGMDRSIVIYDLRTSSPLTKL-ITKLRTNSISWNPMEAFNFVAGSEDHNLYM 256
Query: 107 YDTRKPKEVLMQYGS-CESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGY 165
YD R K L Y + MS+ F+ G + + +YN R + Y
Sbjct: 257 YDMRNLKRALHVYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRIYNVREG-----HSRDVY 311
Query: 166 YNSCTMKSCCFAGTQD-EYVVSGSDDFVLYMWR 197
+ + + D +Y+ SGSDD + +WR
Sbjct: 312 HTKRMQRVTAVKFSMDAQYIFSGSDDSNVRLWR 344
>sp|P0CS36|HAT2_CRYNJ Histone acetyltransferase type B subunit 2 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=HAT2 PE=3 SV=1
Length = 435
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 29 PIDFYL-HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEA---TELAVNSGPFHA 84
P+ Y H V + P + +F S DDG+++++DTRS A +++ ++ +
Sbjct: 232 PLRLYTGHSAYVADVEWHPKNENMFGSVSDDGQIMIWDTRSDNTAKASSQVQGHNAEINC 291
Query: 85 VMFNPVEARLVATANSKDGIALYDTRK 111
+ F P L T +S + IAL+D RK
Sbjct: 292 ISFAPSSEYLFLTGSSDNTIALWDLRK 318
>sp|P0CS37|HAT2_CRYNB Histone acetyltransferase type B subunit 2 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=HAT2 PE=3 SV=1
Length = 435
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 29 PIDFYL-HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEA---TELAVNSGPFHA 84
P+ Y H V + P + +F S DDG+++++DTRS A +++ ++ +
Sbjct: 232 PLRLYTGHSAYVADVEWHPKNENMFGSVSDDGQIMIWDTRSDNTAKASSQVQGHNAEINC 291
Query: 85 VMFNPVEARLVATANSKDGIALYDTRK 111
+ F P L T +S + IAL+D RK
Sbjct: 292 ISFAPSSEYLFLTGSSDNTIALWDLRK 318
>sp|Q13610|PWP1_HUMAN Periodic tryptophan protein 1 homolog OS=Homo sapiens GN=PWP1 PE=1
SV=1
Length = 501
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARL 94
H V LS + + ASA D V+L+D + A LAV++ + F+P EA+
Sbjct: 255 HTDAVLDLSWNKLIRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQT 314
Query: 95 VATANSKDGIALYDTRKPKE 114
+ + + +ALYD R P E
Sbjct: 315 LISGSYDKSVALYDCRSPDE 334
>sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1
Length = 303
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 54 SACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPK 113
+A DDG V ++ T+S LA + GP + F+P + RL+A+++S I L+D + K
Sbjct: 43 TASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP-DGRLIASSSSDHSIRLWDVARSK 101
Query: 114 EVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKS 173
+ + G S ++ F+ QL +++ +S V G+ +S ++S
Sbjct: 102 CLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLL--VGHCDS--IQS 157
Query: 174 CCFAGTQDEYVVSGSDDFVLYMW 196
F+ T D + +GS D +++W
Sbjct: 158 SDFSPTSDS-LATGSWDSTVHIW 179
>sp|Q10G81|MSI1_ORYSJ Histone-binding protein MSI1 homolog OS=Oryza sativa subsp.
japonica GN=MSI1 PE=2 SV=1
Length = 428
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 20/194 (10%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRS---REEATELAVNSGPFHAVMFN 88
F H+ V ++ + +F S DD +L++D RS + +A + G + + FN
Sbjct: 227 FKYHDGVVEDVAWHLRHEYLFGSVGDDHNLLIWDLRSPVSTKPVQSVAAHQGEVNCLAFN 286
Query: 89 PVEARLVATANSKDGIALYDTRKPKEVLMQYG-SCESCMSIRFNKAGTQLLG---LRRRL 144
P +VAT ++ + L+D RK L + E + ++ +L L RRL
Sbjct: 287 PFNEWVVATGSTDKTVKLFDLRKIDTSLHTFDCHKEEVFQVGWSPKNETILASCCLGRRL 346
Query: 145 ----------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLY 194
+ P F H G+ + + + +D + S ++D +L
Sbjct: 347 MVWDLSRIDQEQTPEDAEDGPPELLFIHGGH--TSKISDFSWNPCEDWVIASVAEDNILQ 404
Query: 195 MWRVPRDDIYVSSD 208
+W++ ++IY D
Sbjct: 405 IWQM-AENIYHDED 417
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 6 PIKVLRVIGNDDHVISHDMASGDPI-DFYLHERPVYGLSVDPSQDAIFASACDDGRVLLF 64
P + V G+D V D+ASG+ + F H V ++ P A+ AS DD + L+
Sbjct: 637 PDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSP-DGALLASGSDDRTIRLW 695
Query: 65 DTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALY 107
D ++EE T L ++ P H+V F+P E +A+A+ I ++
Sbjct: 696 DVAAQEEHTTLEGHTEPVHSVAFHP-EGTTLASASEDGTIRIW 737
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 53/220 (24%)
Query: 23 DMASGDPI-DFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREE---------- 71
D+ASGD + H V ++ P A+ AS DD V L+D + EE
Sbjct: 487 DVASGDELHTLEGHTDWVRAVAFSP-DGALLASGSDDATVRLWDVAAAEERAVFEGHTHY 545
Query: 72 -----------------------------ATELAVNSGP---FHAVMFNPVEARLVATAN 99
TE AV G +AV F+P + +VA+ +
Sbjct: 546 VLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSP-DGSMVASGS 604
Query: 100 SKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLL-GLRRRLPPVLYNTRSSSPVA 158
I L+D KE + E+ +S+ F+ G+ L+ G + L++ S +
Sbjct: 605 RDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTV--HLWDVASGEALH 662
Query: 159 QFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRV 198
F EG+ + +++ F+ + SGSDD + +W V
Sbjct: 663 TF--EGHTD--WVRAVAFS-PDGALLASGSDDRTIRLWDV 697
>sp|Q7ZTY4|RBBP7_DANRE Histone-binding protein RBBP7 OS=Danio rerio GN=rbbp7 PE=2 SV=1
Length = 426
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 33/219 (15%)
Query: 14 GNDDHVISHDMASGDPID---------FYLHERPVYGLSVDPSQDAIFASACDDGRVLLF 64
+DDH I SG P + F H V +S +++F S DD +++++
Sbjct: 196 ASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW 255
Query: 65 DTRSREEAT---ELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGS 121
DTRS + + ++ + + FNP ++AT ++ +AL+D R K L + S
Sbjct: 256 DTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES 315
Query: 122 -CESCMSIRFNKAGTQLL---GLRRRL----------PPVLYNTRSSSPVAQFDHEGYYN 167
+ ++++ +L G RRL + P F H G+
Sbjct: 316 HKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGH-- 373
Query: 168 SCTMKSCCFAGTQDE--YVVSGSDDFVLYMWRVPRDDIY 204
T K F+ +E + S S+D ++ +W++ ++IY
Sbjct: 374 --TAKISDFSWNPNEPWVICSVSEDNIMQVWQM-AENIY 409
>sp|Q6BK34|HAT2_DEBHA Histone acetyltransferase type B subunit 2 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=HAT2 PE=3 SV=1
Length = 415
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 35/222 (15%)
Query: 10 LRVIGNDDHVISHDMASGDPID------FYLHERPVYGLSVDPSQDAIFASACDDGRVLL 63
L +D V+ D + D D F H+ V +++F S DD L
Sbjct: 181 LLTASDDKTVVLTDTSRLDATDLSQVCKFTTHKDIVNDAKWHQFDESLFGSVSDDKYFYL 240
Query: 64 FDTRSREEATELAVN--SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKE------- 114
FD R+ E + S +++ F+P LVAT N+ I+L DTRK
Sbjct: 241 FDIRTPGEPVSKFYHPESEGINSLSFSPFSQYLVATGNANSNISLLDTRKLSTKSAVSDG 300
Query: 115 -VLMQYGSCESCMSIRF--NKAGTQLLGLR-RRLPPVLYNT-RSSSPVAQFD-------- 161
+ G +S S+ F +K G G + RRL +L++ + AQ D
Sbjct: 301 LLHTMMGHSDSITSLEFSPHKDGMLASGSQDRRL--ILWDLFKVGEEQAQEDAEDGCPEL 358
Query: 162 ---HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPR 200
H G+ + T S C +D + S +DD ++++W + +
Sbjct: 359 FMMHAGHTGAVTDLSWC--PYKDWTIGSVADDNIVHLWEIGK 398
>sp|Q8SRK1|HAT2_ENCCU Histone acetyltransferase type B subunit 2 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=HAT2 PE=1 SV=1
Length = 384
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 25/169 (14%)
Query: 51 IFASACDDGRVLLFDTRSRE--EATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYD 108
+ +SA D G V+L+DTRS + A E A S +V F+P++ ++AT++ + ++D
Sbjct: 220 LLSSAGDGGMVVLWDTRSEDCIHAIEEAHTSDIL-SVRFSPLDGNVIATSSCDGSVKVWD 278
Query: 109 TR---KPKEVLMQYGSCESCMSIRFNKAGTQLLG---LRRRL-----------PPVLYNT 151
R +P +L+ G + +S+ ++ ++L RR+ P Y
Sbjct: 279 RRSLSQPLHILL--GHSKDVVSVEWSPHNDKVLASGSTDRRVIVWDLGQAGAEVPEEYKA 336
Query: 152 RSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPR 200
P +F H G+ + T+ + + + S S+D +L +W++P+
Sbjct: 337 E-GPPEMKFLHGGH--TSTVCDISWNPAEPFEIASVSEDNILQIWQMPQ 382
>sp|Q6P3H7|RBBP4_DANRE Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3
Length = 424
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 38/203 (18%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAV------ 85
F H V +S +++F S DD +++++DTRS S P HAV
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNN-------TSKPSHAVDAHTAE 275
Query: 86 ----MFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGS-CESCMSIRFNKAGTQLL-- 138
FNP ++AT ++ +AL+D R K L + S + ++++ +L
Sbjct: 276 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS 335
Query: 139 -GLRRRL----------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE--YVV 185
G RRL + P F H G+ T K F+ +E +
Sbjct: 336 SGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH----TAKISDFSWNPNEPWVIC 391
Query: 186 SGSDDFVLYMWRVPRDDIYVSSD 208
S S+D ++ +W++ ++IY D
Sbjct: 392 SVSEDNIMQVWQM-AENIYNDED 413
>sp|P33750|DCA13_YEAST Protein SOF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SOF1 PE=1 SV=1
Length = 489
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 8/161 (4%)
Query: 39 VYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATA 98
+ L + ++ I AS D ++L+D R+ T+ V + +A+ +NP+EA TA
Sbjct: 222 ITSLKFNQNETDILASTGSDNSIVLYDLRT-NSPTQKIVQTMRTNAICWNPMEAFNFVTA 280
Query: 99 NSKDGIALYDTRKPKEVLMQYGS-CESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPV 157
N YD R L + + M + F+ G +++ +Y T
Sbjct: 281 NEDHNAYYYDMRNLSRSLNVFKDHVSAVMDVDFSPTGDEIVTGSYDKSIRIYKTNHGHS- 339
Query: 158 AQFDHEGYYNSCTMKSCCFAGTQD-EYVVSGSDDFVLYMWR 197
E Y+ + D +Y++SGSDD + +WR
Sbjct: 340 ----REIYHTKRMQHVFQVKYSMDSKYIISGSDDGNVRLWR 376
>sp|Q5RF92|RBBP4_PONAB Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3
Length = 425
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 24/196 (12%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT---ELAVNSGPFHAVMFN 88
F H V +S +++F S DD +++++DTRS + + ++ + + FN
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
Query: 89 PVEARLVATANSKDGIALYDTRKPKEVLMQYGS-CESCMSIRFNKAGTQLL---GLRRRL 144
P ++AT ++ +AL+D R K L + S + ++++ +L G RRL
Sbjct: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
Query: 145 ----------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE--YVVSGSDDFV 192
+ P F H G+ T K F+ +E + S S+D +
Sbjct: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGH----TAKISDFSWNPNEPWVICSVSEDNI 398
Query: 193 LYMWRVPRDDIYVSSD 208
+ +W++ ++IY D
Sbjct: 399 MQVWQM-AENIYNDED 413
>sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=5
Length = 425
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 24/196 (12%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT---ELAVNSGPFHAVMFN 88
F H V +S +++F S DD +++++DTRS + + ++ + + FN
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
Query: 89 PVEARLVATANSKDGIALYDTRKPKEVLMQYGS-CESCMSIRFNKAGTQLL---GLRRRL 144
P ++AT ++ +AL+D R K L + S + ++++ +L G RRL
Sbjct: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
Query: 145 ----------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE--YVVSGSDDFV 192
+ P F H G+ T K F+ +E + S S+D +
Sbjct: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGH----TAKISDFSWNPNEPWVICSVSEDNI 398
Query: 193 LYMWRVPRDDIYVSSD 208
+ +W++ ++IY D
Sbjct: 399 MQVWQM-AENIYNDED 413
>sp|Q09028|RBBP4_HUMAN Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3
Length = 425
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 24/196 (12%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT---ELAVNSGPFHAVMFN 88
F H V +S +++F S DD +++++DTRS + + ++ + + FN
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
Query: 89 PVEARLVATANSKDGIALYDTRKPKEVLMQYGS-CESCMSIRFNKAGTQLL---GLRRRL 144
P ++AT ++ +AL+D R K L + S + ++++ +L G RRL
Sbjct: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
Query: 145 ----------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE--YVVSGSDDFV 192
+ P F H G+ T K F+ +E + S S+D +
Sbjct: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGH----TAKISDFSWNPNEPWVICSVSEDNI 398
Query: 193 LYMWRVPRDDIYVSSD 208
+ +W++ ++IY D
Sbjct: 399 MQVWQM-AENIYNDED 413
>sp|Q3MHL3|RBBP4_BOVIN Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 24/196 (12%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT---ELAVNSGPFHAVMFN 88
F H V +S +++F S DD +++++DTRS + + ++ + + FN
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
Query: 89 PVEARLVATANSKDGIALYDTRKPKEVLMQYGS-CESCMSIRFNKAGTQLL---GLRRRL 144
P ++AT ++ +AL+D R K L + S + ++++ +L G RRL
Sbjct: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
Query: 145 ----------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE--YVVSGSDDFV 192
+ P F H G+ T K F+ +E + S S+D +
Sbjct: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGH----TAKISDFSWNPNEPWVICSVSEDNI 398
Query: 193 LYMWRVPRDDIYVSSD 208
+ +W++ ++IY D
Sbjct: 399 MQVWQM-AENIYNDED 413
>sp|Q6INH0|RBP4B_XENLA Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-b PE=1
SV=3
Length = 425
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 24/196 (12%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT---ELAVNSGPFHAVMFN 88
F H V +S +++F S DD +++++DTRS + + ++ + + FN
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
Query: 89 PVEARLVATANSKDGIALYDTRKPKEVLMQYGS-CESCMSIRFNKAGTQLL---GLRRRL 144
P ++AT ++ +AL+D R K L + S + ++++ +L G RRL
Sbjct: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
Query: 145 ----------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE--YVVSGSDDFV 192
+ P F H G+ T K F+ +E + S S+D +
Sbjct: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGH----TAKISDFSWNPNEPWVICSVSEDNI 398
Query: 193 LYMWRVPRDDIYVSSD 208
+ +W++ ++IY D
Sbjct: 399 MQVWQM-AENIYNDED 413
>sp|O93377|RBP4A_XENLA Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-a PE=1
SV=3
Length = 425
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 24/196 (12%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT---ELAVNSGPFHAVMFN 88
F H V +S +++F S DD +++++DTRS + + ++ + + FN
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
Query: 89 PVEARLVATANSKDGIALYDTRKPKEVLMQYGS-CESCMSIRFNKAGTQLL---GLRRRL 144
P ++AT ++ +AL+D R K L + S + ++++ +L G RRL
Sbjct: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
Query: 145 ----------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE--YVVSGSDDFV 192
+ P F H G+ T K F+ +E + S S+D +
Sbjct: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGH----TAKISDFSWNPNEPWVICSVSEDNI 398
Query: 193 LYMWRVPRDDIYVSSD 208
+ +W++ ++IY D
Sbjct: 399 MQVWQM-AENIYNDED 413
>sp|Q7KWL3|DCA13_DICDI DDB1- and CUL4-associated factor 13 OS=Dictyostelium discoideum
GN=wdsof1 PE=3 SV=1
Length = 445
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 32/203 (15%)
Query: 16 DDHVISHDMASGDP--IDFYLHER--PVYGL----------SVDPSQDAIFASACDDGRV 61
D + S A+ P ++ + H+R P+ L +P + + AS D +
Sbjct: 163 DHQLNSTTFATSGPTSVEIWKHQRSTPIQTLQWGHSTITKVKFNPIETHLLASCTTDRDI 222
Query: 62 LLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRK-PKEVLMQYG 120
+L+D R A +L S +++ + P E+ +A AN + + YD R K + +
Sbjct: 223 ILYDIRENSPAQKLTT-SMRSNSIAWCPTESFTLAIANEDENVYQYDIRNLSKAMTVHRD 281
Query: 121 SCESCMSIRFNKAGTQLLG-----LRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCC 175
S + I ++ G +++ R P Y +R E YY + +
Sbjct: 282 HVGSVLDIDYSPTGREIVSGSYDKTIRIFPVDSYKSR----------EVYYTNRMQRIFS 331
Query: 176 FAGTQD-EYVVSGSDDFVLYMWR 197
T D +++SGSDD + +W+
Sbjct: 332 VLFTADSRFILSGSDDMNIRVWK 354
>sp|Q5M7K4|RBBP4_XENTR Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2
SV=3
Length = 425
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 24/196 (12%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT---ELAVNSGPFHAVMFN 88
F H V +S +++F S DD +++++DTRS + + ++ + + FN
Sbjct: 223 FTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
Query: 89 PVEARLVATANSKDGIALYDTRKPKEVLMQYGS-CESCMSIRFNKAGTQLL---GLRRRL 144
P ++AT ++ +AL+D R K L + S + ++++ +L G RRL
Sbjct: 283 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 342
Query: 145 ----------PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE--YVVSGSDDFV 192
+ P F H G+ T K F+ +E + S S+D +
Sbjct: 343 NVWDLSKIGEEQSPEDAEDGPPELLFIHGGH----TAKISDFSWNPNEPWVICSVSEDNI 398
Query: 193 LYMWRVPRDDIYVSSD 208
+ +W++ ++IY D
Sbjct: 399 MQVWQM-AENIYNDED 413
>sp|Q99LL5|PWP1_MOUSE Periodic tryptophan protein 1 homolog OS=Mus musculus GN=Pwp1 PE=1
SV=1
Length = 501
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARL 94
H V LS + + + ASA D V+L+D + L ++ + F+P EA+
Sbjct: 254 HTDAVLDLSWNKTVRNVLASASADSTVVLWDLSVGKSVARLTAHTDKVQTLQFHPFEAQT 313
Query: 95 VATANSKDGIALYDTRKPKEVLMQY 119
+ + + +ALYD R P + Q+
Sbjct: 314 LISGSYDKSVALYDCRDPSQNHRQW 338
>sp|Q9Y825|YEC6_SCHPO Uncharacterized WD repeat-containing protein C25H1.06
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC25H1.06 PE=4 SV=1
Length = 408
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 18/201 (8%)
Query: 11 RVIGNDDHVISHDMASGDPI-DFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR 69
+++ D + S D P+ DF+ + PV + P ++ + D+G + D R +
Sbjct: 206 KILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEYHPHHTNLYIAVNDNGIAFICDNRLQ 265
Query: 70 EEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSI- 128
+ ++ S P +V NP A L A + +D + L+D R + + S +
Sbjct: 266 QTCSKTVKASNPLFSVRHNPSIATLFALGSEQD-LQLWDLRNLNKSVFNTSEDLSDNRLK 324
Query: 129 ---RFNKAGTQLLGLRRRLPPV---------LYNTRSSSPVAQFDHEGYYNSCTMKSCCF 176
R GT L R + ++N ++P+ +F H G+ T+ F
Sbjct: 325 VPSRLTLGGTSLSWSWRHSGRIVSACQEYCYVWNFNKANPL-EFVHAGH--KGTVNEVDF 381
Query: 177 AGTQDEYVVSGSDDFVLYMWR 197
+ + + S +DD L++W+
Sbjct: 382 DPFEAQCIASVADDNELHIWK 402
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 9/127 (7%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLF-------DTRSREEATELAVNSGPFHAVMF 87
H++ +GLS + Q+ +A +D ++L + DTR + + P + V +
Sbjct: 181 HKKEGFGLSWNRQQNCRLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEY 240
Query: 88 NPVEARLVATANSKDGIALY-DTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPP 146
+P L N +GIA D R + + S+R N + L L
Sbjct: 241 HPHHTNLYIAVND-NGIAFICDNRLQQTCSKTVKASNPLFSVRHNPSIATLFALGSEQDL 299
Query: 147 VLYNTRS 153
L++ R+
Sbjct: 300 QLWDLRN 306
>sp|Q4QR85|MEP50_RAT Methylosome protein 50 OS=Rattus norvegicus GN=Wdr77 PE=1 SV=1
Length = 342
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 12 VIGNDDHVIS-HDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR 69
V G+ D I D+A ++ Y H V ++ P ++ +F S +D R+LL+DTR
Sbjct: 141 VSGSKDFCIKIWDLAQQMSLNSYRAHAGQVTCVAASPHRETVFLSCSEDSRILLWDTRCP 200
Query: 70 EEATELAVNSGPF--HAVMFNPVEARLVATANSKDGIALYDTRK 111
+ A+++ N+ + ++ ++P ++ + + ++L DT+
Sbjct: 201 KPASQMGCNASGYLPTSLAWHPQQSEIFVFGDENGSVSLVDTKN 244
>sp|Q54LT8|STRAP_DICDI Serine-threonine kinase receptor-associated protein
OS=Dictyostelium discoideum GN=strap PE=3 SV=1
Length = 293
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 35 HERPVYGLSV--DPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEA 92
H RPV LS + S + SAC DG +L + + + + G + FN +
Sbjct: 10 HSRPVSDLSFSNENSDGSFIVSACLDGSPMLRNGENGDWIGTFEGHKGAVWSSRFNSTAS 69
Query: 93 RLVATANSKDGIALYDTRKPKEVL-MQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNT 151
+ + TA++ + L+DT E+L +++ S N + + G ++ +
Sbjct: 70 QAL-TASADYTVKLWDTLNGSEILSIEHQSIVKTADFSNNNSRV-VTGGSEKILRIFDLE 127
Query: 152 RSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIYVSSDIYV 211
R + P+ Q G+ N T+K+ ++ D+ V+SG D V+ +W D+ + + +
Sbjct: 128 RPNDPLLQI--SGHTN--TIKTATWSVHNDDIVLSGGLDEVIRIW-----DLRSGTQVSL 178
Query: 212 CRHGSL 217
C S+
Sbjct: 179 CAKSSI 184
>sp|Q7ZYQ6|DCA13_XENLA DDB1- and CUL4-associated factor 13 OS=Xenopus laevis GN=dcaf13
PE=2 SV=1
Length = 445
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 42/223 (18%)
Query: 4 GDPIKVLRVI-------GNDDHVISHDMAS-GDPIDFYLHERPV----YGLSVD------ 45
G+ ++ +R I G D HV A+ G +D + +R Y VD
Sbjct: 144 GEKVEPMRTILGKTVFTGIDHHVKDAVFATCGQQVDIWDEQRSAPMRSYAWGVDSISSVR 203
Query: 46 --PSQDAIFASACDDGRVLLFDTRS----REEATELAVNSGPFHAVMFNPVEARLVATAN 99
P + I +S D ++L+D R ++ E+ N A+ +NP+EA + AN
Sbjct: 204 FNPVETHILSSCGTDRSIVLYDKRKPTPLKKIILEMRTN-----ALCWNPMEAFIFTAAN 258
Query: 100 SKDGIALYDTR---KPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSP 156
+ YD R P +V M + S + + + ++ G +L+ ++ P
Sbjct: 259 ENFNLYTYDMRYMDSPVKVHMDHVS--AVLDVDYSPTGKELVSASFDKSIRIF------P 310
Query: 157 VAQFDHEGYYNSCTMK--SCCFAGTQDEYVVSGSDDFVLYMWR 197
V Y++ M+ +C ++YV+ GSD+ + +W+
Sbjct: 311 VQSGHSREVYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWK 353
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 21/117 (17%)
Query: 30 IDFYLHERPVYGLSVDPS----------------QDAIFASACDDGRVLLFDTRSREEAT 73
+ + E P YG V+P +DA+FA+ +V ++D +
Sbjct: 133 VKQWAMESPGYGEKVEPMRTILGKTVFTGIDHHVKDAVFATCGQ--QVDIWDEQRSAPMR 190
Query: 74 ELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKP---KEVLMQYGSCESCMS 127
A +V FNPVE ++++ + I LYD RKP K+++++ + C +
Sbjct: 191 SYAWGVDSISSVRFNPVETHILSSCGTDRSIVLYDKRKPTPLKKIILEMRTNALCWN 247
>sp|Q6C7Q4|HAT2_YARLI Histone acetyltransferase type B subunit 2 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=HAT2 PE=3 SV=1
Length = 452
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 27/200 (13%)
Query: 29 PIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVN-SGPFHAVMF 87
P Y H+ V + D + SA DD + L+DTR + S +++ F
Sbjct: 251 PHTVYHHDAAVNDVKFSYKMDFLIGSASDDCTLRLWDTRKPGNKAACTIKESRGINSLDF 310
Query: 88 NPVEARLVATANSKDGIALYDTRKPKEVLMQ-YGSCESCMSIRFNKAGTQLL--GLRRRL 144
NP LVAT ++ + + ++D RK + Q Y C+ +++ +L G R
Sbjct: 311 NPHSEFLVATGSADETVKVWDMRKMDTPISQLYSHCDEVTKVQWCPHQPSVLASGGHDRA 370
Query: 145 PPV-----LYNTRSSS------PVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVL 193
V L++ SS P F H G+ S + + T + S ++D V+
Sbjct: 371 ILVWDIARLHDDLSSDENDEGPPELLFHHGGH--SSRISDFDWHPTLPWVIASAAEDNVI 428
Query: 194 YMWR----------VPRDDI 203
+WR VP DD+
Sbjct: 429 QVWRMAESISNDEAVPADDV 448
>sp|A8IR43|WDR12_CHLRE Ribosome biogenesis protein WDR12 homolog OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_128420 PE=3 SV=2
Length = 444
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 14 GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73
G D V D++SG D Y + V ++ + A+ A C D + L+DTR + +
Sbjct: 292 GWDHSVRRWDVSSGAAADTYNGSKAVLCIASHAASPALVAFGCSDRALRLWDTRGKAGSD 351
Query: 74 ELAVNSGPFH-----AVMFNPVEARLVATANSKDGIALYDTR 110
LAV + H AV + P +A+A+ I ++D R
Sbjct: 352 ALAVTTQGAHGGWVTAVAWCPSSQHHIASASHDGTIKMWDIR 393
>sp|Q6P315|RBBP7_XENTR Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2
SV=1
Length = 425
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 24/176 (13%)
Query: 48 QDAIFASACDDGRVLLFDTRSR---EEATELAVNSGPFHAVMFNPVEARLVATANSKDGI 104
+++F S DD +++++DTRS + + + ++ + + FNP ++AT ++ +
Sbjct: 238 HESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTV 297
Query: 105 ALYDTRKPKEVLMQYGS-CESCMSIRFNKAGTQLL---GLRRRL----------PPVLYN 150
AL+D R K L + S + + ++ +L G RRL +
Sbjct: 298 ALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED 357
Query: 151 TRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE--YVVSGSDDFVLYMWRVPRDDIY 204
P F H G+ T K F+ +E + S S+D ++ +W++ ++IY
Sbjct: 358 AEDGPPELLFIHGGH----TAKISDFSWNPNEPWVICSVSEDNIMQIWQM-AENIY 408
>sp|O13923|CORO_SCHPO Coronin-like protein crn1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=crn1 PE=1 SV=1
Length = 601
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 22/170 (12%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT------------ELAVNS 79
F H V +P D + AS DD +++++ + E+ T EL +S
Sbjct: 77 FRGHTAAVLDTDWNPFHDQVLASGGDDSKIMIW--KVPEDYTVMEPYEDVHPIAELKGHS 134
Query: 80 GPFHAVMFNPVEARLVATANSKDGIALYDTRKP-KEVLMQYGSCESCMSIRFNKAGTQLL 138
V ++P A ++A++++ + I L+D K V ++ C S+ FN GT+L+
Sbjct: 135 RKVGLVQYHPTAANVLASSSADNTIKLWDCEKGVAHVSLKMDVM--CQSMSFNADGTRLV 192
Query: 139 GLRRRLPPVLYNTRSSSPVAQFD-HEGYYNSCTMKSCCFAGTQDEYVVSG 187
R +++ R+ PV+ + H G N + G+ D + +G
Sbjct: 193 TTSRDKKVRVWDPRTDKPVSVGNGHAGAKNP----RVVWLGSLDRFATTG 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,447,651
Number of Sequences: 539616
Number of extensions: 3342914
Number of successful extensions: 8257
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 203
Number of HSP's that attempted gapping in prelim test: 7889
Number of HSP's gapped (non-prelim): 525
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)