Query psy11351
Match_columns 224
No_of_seqs 438 out of 1064
Neff 11.4
Searched_HMMs 29240
Date Fri Aug 16 16:11:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11351.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11351hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 1.9E-40 6.6E-45 251.8 24.6 198 2-204 134-335 (344)
2 4gqb_B Methylosome protein 50; 100.0 1.3E-39 4.4E-44 247.2 25.7 191 8-204 94-293 (344)
3 2ynn_A Coatomer subunit beta'; 100.0 7.7E-39 2.6E-43 239.3 27.1 197 1-204 19-221 (304)
4 1vyh_C Platelet-activating fac 100.0 7.5E-39 2.6E-43 248.6 26.5 196 2-204 115-331 (410)
5 3ow8_A WD repeat-containing pr 100.0 9.9E-39 3.4E-43 240.4 26.0 195 2-204 87-283 (321)
6 3ow8_A WD repeat-containing pr 100.0 5.8E-39 2E-43 241.7 23.6 190 2-199 129-320 (321)
7 2ynn_A Coatomer subunit beta'; 100.0 1.7E-38 5.9E-43 237.4 25.6 195 3-204 63-263 (304)
8 4g56_B MGC81050 protein; prote 100.0 6.3E-39 2.1E-43 244.8 22.8 197 2-203 146-346 (357)
9 1vyh_C Platelet-activating fac 100.0 1.1E-38 3.8E-43 247.6 24.3 195 2-204 157-373 (410)
10 3frx_A Guanine nucleotide-bind 100.0 6.8E-38 2.3E-42 235.7 24.0 159 2-162 72-236 (319)
11 4ery_A WD repeat-containing pr 100.0 2.9E-37 1E-41 231.3 27.1 195 2-204 30-227 (312)
12 1got_B GT-beta; complex (GTP-b 100.0 5.8E-37 2E-41 232.5 28.6 197 2-204 104-305 (340)
13 2pbi_B Guanine nucleotide-bind 100.0 1.6E-36 5.4E-41 231.3 30.0 199 2-204 71-319 (354)
14 1got_B GT-beta; complex (GTP-b 100.0 3.8E-37 1.3E-41 233.5 25.4 194 2-204 62-261 (340)
15 3frx_A Guanine nucleotide-bind 100.0 5.2E-37 1.8E-41 230.9 25.0 189 7-204 30-231 (319)
16 4ery_A WD repeat-containing pr 100.0 3.1E-36 1.1E-40 225.7 28.7 198 2-204 72-272 (312)
17 2pbi_B Guanine nucleotide-bind 100.0 9.8E-37 3.4E-41 232.4 24.3 188 3-197 162-354 (354)
18 1erj_A Transcriptional repress 100.0 3E-36 1E-40 232.8 26.8 195 2-204 130-345 (393)
19 4g56_B MGC81050 protein; prote 100.0 1.3E-36 4.5E-41 232.0 22.9 194 4-204 103-305 (357)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.2E-37 2.5E-41 232.4 21.1 191 1-199 22-224 (345)
21 2xzm_R RACK1; ribosome, transl 100.0 8.4E-36 2.9E-40 226.4 25.5 186 6-201 38-245 (343)
22 2pm7_B Protein transport prote 100.0 5.8E-36 2E-40 223.0 24.0 194 2-202 16-240 (297)
23 3iz6_a 40S ribosomal protein R 100.0 1.1E-35 3.9E-40 228.6 24.2 190 7-203 170-378 (380)
24 1nr0_A Actin interacting prote 100.0 7.5E-35 2.6E-39 236.6 28.5 153 4-158 156-360 (611)
25 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.2E-35 1.1E-39 223.3 24.1 148 2-151 68-223 (345)
26 3iz6_a 40S ribosomal protein R 100.0 4.9E-36 1.7E-40 230.6 19.8 196 2-204 73-284 (380)
27 1erj_A Transcriptional repress 100.0 1.3E-35 4.4E-40 229.2 22.0 197 2-201 172-390 (393)
28 1nr0_A Actin interacting prote 100.0 3E-35 1E-39 238.9 23.6 194 2-204 66-274 (611)
29 4h5i_A Guanine nucleotide-exch 100.0 2.1E-35 7.3E-40 225.9 21.3 191 2-201 140-344 (365)
30 3vl1_A 26S proteasome regulato 100.0 3.9E-35 1.3E-39 227.8 22.9 193 3-203 105-325 (420)
31 2hes_X YDR267CP; beta-propelle 100.0 4.6E-35 1.6E-39 221.2 22.5 186 9-201 26-231 (330)
32 2hes_X YDR267CP; beta-propelle 100.0 5.2E-35 1.8E-39 220.9 22.2 192 2-202 65-282 (330)
33 3dwl_C Actin-related protein 2 100.0 2.9E-36 1E-40 231.2 15.5 195 1-203 17-239 (377)
34 3bg1_A Protein SEC13 homolog; 100.0 2.4E-35 8.4E-40 221.4 18.8 194 2-201 20-248 (316)
35 3f3f_A Nucleoporin SEH1; struc 100.0 9.5E-35 3.2E-39 219.5 22.0 195 2-204 18-341 (351)
36 2pm7_B Protein transport prote 100.0 2.4E-34 8.2E-39 214.3 23.5 191 7-204 67-289 (297)
37 2aq5_A Coronin-1A; WD40 repeat 100.0 5.7E-34 1.9E-38 220.5 25.4 194 3-203 89-302 (402)
38 4e54_B DNA damage-binding prot 100.0 1.1E-34 3.9E-39 226.7 20.9 191 6-204 131-331 (435)
39 3dm0_A Maltose-binding peripla 100.0 6.2E-34 2.1E-38 234.3 26.2 191 6-204 394-596 (694)
40 3dm0_A Maltose-binding peripla 100.0 3.3E-34 1.1E-38 235.9 24.4 193 2-203 437-635 (694)
41 2xzm_R RACK1; ribosome, transl 100.0 8.9E-34 3E-38 215.2 24.6 192 2-203 83-288 (343)
42 1gxr_A ESG1, transducin-like e 100.0 6.4E-33 2.2E-37 209.0 27.4 194 2-204 104-300 (337)
43 2ymu_A WD-40 repeat protein; u 100.0 4.9E-34 1.7E-38 229.9 21.9 184 2-197 392-577 (577)
44 1gxr_A ESG1, transducin-like e 100.0 3.1E-33 1.1E-37 210.7 24.0 194 2-204 58-259 (337)
45 3jrp_A Fusion protein of prote 100.0 1.9E-33 6.5E-38 215.1 23.0 193 2-202 18-242 (379)
46 3vl1_A 26S proteasome regulato 100.0 5.7E-34 2E-38 221.3 20.0 200 2-204 63-282 (420)
47 1k8k_C P40, ARP2/3 complex 41 100.0 4.8E-33 1.6E-37 212.6 24.6 195 2-204 15-237 (372)
48 3ei3_B DNA damage-binding prot 100.0 2.9E-33 1E-37 215.1 23.3 195 2-204 80-286 (383)
49 2aq5_A Coronin-1A; WD40 repeat 100.0 4.5E-33 1.5E-37 215.5 24.1 188 9-203 49-257 (402)
50 2j04_B YDR362CP, TAU91; beta p 100.0 3.5E-34 1.2E-38 227.8 18.2 186 7-201 225-429 (524)
51 3k26_A Polycomb protein EED; W 100.0 1.6E-33 5.4E-38 214.6 20.5 188 7-204 85-322 (366)
52 3zwl_B Eukaryotic translation 100.0 1.4E-32 4.8E-37 209.4 25.2 194 2-204 39-253 (369)
53 3bg1_A Protein SEC13 homolog; 100.0 7.7E-34 2.6E-38 213.3 17.7 189 7-202 71-295 (316)
54 2ymu_A WD-40 repeat protein; u 100.0 1.1E-32 3.7E-37 222.1 25.5 190 2-204 351-542 (577)
55 4gq1_A NUP37; propeller, trans 100.0 3.4E-33 1.2E-37 215.7 20.6 199 5-204 99-352 (393)
56 2pm9_A Protein WEB1, protein t 100.0 1E-32 3.6E-37 213.7 23.1 198 2-204 74-298 (416)
57 4aez_A CDC20, WD repeat-contai 100.0 1E-31 3.5E-36 207.9 28.2 188 8-204 104-297 (401)
58 4aez_A CDC20, WD repeat-contai 100.0 3.5E-32 1.2E-36 210.5 25.5 193 2-204 141-340 (401)
59 4ggc_A P55CDC, cell division c 100.0 2.3E-32 8E-37 204.6 23.4 186 8-202 37-317 (318)
60 3v7d_B Cell division control p 100.0 3.8E-32 1.3E-36 213.7 25.6 189 6-204 131-345 (464)
61 3gre_A Serine/threonine-protei 100.0 4.4E-33 1.5E-37 217.5 20.0 199 2-204 70-296 (437)
62 3lrv_A PRE-mRNA-splicing facto 100.0 4.4E-32 1.5E-36 205.9 24.8 187 10-203 88-295 (343)
63 1sq9_A Antiviral protein SKI8; 100.0 4.7E-33 1.6E-37 214.5 19.3 189 5-202 135-397 (397)
64 3jrp_A Fusion protein of prote 100.0 5.5E-32 1.9E-36 206.9 24.4 191 7-204 69-291 (379)
65 2pm9_A Protein WEB1, protein t 100.0 6E-33 2.1E-37 215.1 19.1 195 3-203 121-340 (416)
66 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.9E-32 1.7E-36 212.6 24.5 196 2-201 109-342 (450)
67 1sq9_A Antiviral protein SKI8; 100.0 2.1E-32 7.3E-37 210.9 21.5 188 8-204 82-326 (397)
68 3k26_A Polycomb protein EED; W 100.0 5.9E-33 2E-37 211.4 18.0 188 3-200 123-366 (366)
69 3dw8_B Serine/threonine-protei 100.0 1.9E-32 6.6E-37 214.2 21.4 198 2-203 35-319 (447)
70 3dwl_C Actin-related protein 2 100.0 3.8E-33 1.3E-37 213.9 16.9 188 2-199 62-280 (377)
71 2xyi_A Probable histone-bindin 100.0 7.9E-32 2.7E-36 210.3 24.5 189 7-200 141-353 (430)
72 2j04_B YDR362CP, TAU91; beta p 100.0 1.8E-32 6.1E-37 218.0 21.0 193 6-204 172-390 (524)
73 2oaj_A Protein SNI1; WD40 repe 100.0 7.7E-33 2.6E-37 232.9 19.8 198 1-204 23-246 (902)
74 3dw8_B Serine/threonine-protei 100.0 3.8E-32 1.3E-36 212.5 21.4 192 8-204 108-377 (447)
75 3mkq_A Coatomer beta'-subunit; 100.0 1.5E-31 5E-36 223.2 26.1 197 1-204 19-221 (814)
76 3v7d_B Cell division control p 100.0 2.7E-31 9.4E-36 208.9 26.2 184 9-204 175-385 (464)
77 3gre_A Serine/threonine-protei 100.0 3.7E-32 1.3E-36 212.3 20.8 199 2-204 118-363 (437)
78 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-31 6E-36 231.6 26.9 201 2-204 622-875 (1249)
79 2xyi_A Probable histone-bindin 100.0 1.6E-31 5.4E-36 208.6 24.0 194 3-202 189-412 (430)
80 4aow_A Guanine nucleotide-bind 100.0 5.4E-31 1.9E-35 198.9 26.2 195 2-204 45-250 (340)
81 1k8k_C P40, ARP2/3 complex 41 100.0 6E-32 2E-36 206.5 21.1 190 2-200 59-274 (372)
82 3ei3_B DNA damage-binding prot 100.0 2.1E-31 7.2E-36 204.7 24.1 192 6-204 130-343 (383)
83 1r5m_A SIR4-interacting protei 100.0 1.3E-31 4.4E-36 207.7 22.4 191 2-202 115-363 (425)
84 1p22_A F-BOX/WD-repeat protein 100.0 6.6E-31 2.3E-35 205.3 25.7 183 6-204 142-329 (435)
85 4aow_A Guanine nucleotide-bind 100.0 1.6E-31 5.4E-36 201.8 21.4 196 4-203 137-340 (340)
86 3i2n_A WD repeat-containing pr 100.0 1.2E-31 4.2E-36 203.6 20.6 196 2-203 25-246 (357)
87 3zwl_B Eukaryotic translation 100.0 1.4E-30 4.8E-35 198.4 26.4 195 2-204 81-308 (369)
88 4a11_B DNA excision repair pro 100.0 5.2E-31 1.8E-35 203.4 24.1 200 2-203 50-279 (408)
89 3jro_A Fusion protein of prote 100.0 5.7E-32 1.9E-36 224.3 19.8 195 1-202 15-240 (753)
90 4e54_B DNA damage-binding prot 100.0 1.5E-31 5E-36 209.1 20.9 196 6-204 176-391 (435)
91 4a11_B DNA excision repair pro 100.0 5.2E-31 1.8E-35 203.4 23.6 192 6-204 111-369 (408)
92 2w18_A PALB2, fancn, partner a 100.0 3.2E-31 1.1E-35 196.7 21.4 175 15-198 155-355 (356)
93 3i2n_A WD repeat-containing pr 100.0 2.5E-31 8.6E-36 201.9 21.2 188 7-203 80-294 (357)
94 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.7E-30 5.8E-35 203.5 26.4 183 6-204 128-312 (445)
95 3mkq_A Coatomer beta'-subunit; 100.0 3.2E-31 1.1E-35 221.2 23.4 196 2-204 62-263 (814)
96 3mmy_A MRNA export factor; mRN 100.0 7.2E-31 2.5E-35 199.9 23.3 194 7-204 54-308 (368)
97 1r5m_A SIR4-interacting protei 100.0 1.9E-31 6.4E-36 206.8 20.4 184 7-199 217-424 (425)
98 1yfq_A Cell cycle arrest prote 100.0 3.9E-31 1.3E-35 199.9 21.1 195 3-204 64-286 (342)
99 3lrv_A PRE-mRNA-splicing facto 100.0 3.8E-31 1.3E-35 200.7 20.2 188 5-204 46-248 (343)
100 4gga_A P55CDC, cell division c 100.0 1.2E-29 4.1E-34 197.4 28.8 188 7-204 116-314 (420)
101 4gga_A P55CDC, cell division c 100.0 3E-30 1E-34 200.8 24.4 194 2-203 154-398 (420)
102 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.5E-30 5.2E-35 204.1 22.2 193 2-204 11-275 (450)
103 3jro_A Fusion protein of prote 100.0 7.6E-31 2.6E-35 217.5 21.2 190 7-203 67-288 (753)
104 1pgu_A Actin interacting prote 100.0 3E-30 1E-34 208.9 23.7 193 1-204 24-242 (615)
105 3odt_A Protein DOA1; ubiquitin 100.0 2.7E-30 9.4E-35 192.8 21.0 184 6-204 113-300 (313)
106 3odt_A Protein DOA1; ubiquitin 100.0 1.4E-29 4.9E-34 188.9 24.7 185 5-204 27-218 (313)
107 1pgu_A Actin interacting prote 100.0 3.3E-30 1.1E-34 208.7 22.6 192 2-204 71-287 (615)
108 1p22_A F-BOX/WD-repeat protein 100.0 7.8E-30 2.7E-34 199.3 23.3 181 6-202 182-367 (435)
109 3vu4_A KMHSV2; beta-propeller 100.0 1.4E-29 4.8E-34 193.0 23.9 192 9-202 73-338 (355)
110 1yfq_A Cell cycle arrest prote 100.0 2.9E-30 9.8E-35 195.2 19.5 188 2-201 18-226 (342)
111 2oaj_A Protein SNI1; WD40 repe 100.0 7.9E-30 2.7E-34 214.7 23.9 194 2-204 442-736 (902)
112 3vu4_A KMHSV2; beta-propeller 100.0 9E-30 3.1E-34 194.1 21.8 191 2-202 26-273 (355)
113 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.7E-29 2.3E-33 194.5 26.9 182 7-204 169-352 (445)
114 3mmy_A MRNA export factor; mRN 100.0 3.3E-30 1.1E-34 196.3 17.8 192 2-201 93-347 (368)
115 2j04_A TAU60, YPL007P, hypothe 100.0 1E-29 3.5E-34 199.7 20.0 182 2-199 92-296 (588)
116 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-29 6.6E-34 218.9 23.4 192 2-200 664-913 (1249)
117 2j04_A TAU60, YPL007P, hypothe 100.0 3.1E-29 1.1E-33 197.1 20.8 187 2-204 22-258 (588)
118 4gq1_A NUP37; propeller, trans 100.0 1.4E-29 4.9E-34 195.4 17.0 186 6-198 155-387 (393)
119 4h5i_A Guanine nucleotide-exch 100.0 5.9E-29 2E-33 190.2 17.3 183 12-204 99-304 (365)
120 1l0q_A Surface layer protein; 100.0 5.3E-27 1.8E-31 180.5 25.5 189 7-204 2-193 (391)
121 3f3f_A Nucleoporin SEH1; struc 100.0 1.5E-27 5.2E-32 179.9 22.0 166 34-201 9-250 (351)
122 1l0q_A Surface layer protein; 100.0 6.5E-27 2.2E-31 180.0 25.2 194 2-204 38-237 (391)
123 3bws_A Protein LP49; two-domai 100.0 3.2E-27 1.1E-31 184.1 22.5 195 2-204 129-338 (433)
124 2w18_A PALB2, fancn, partner a 100.0 3.7E-27 1.3E-31 175.0 18.1 142 6-151 192-355 (356)
125 2oit_A Nucleoporin 214KDA; NH2 100.0 1.1E-26 3.7E-31 181.3 20.2 196 2-201 43-279 (434)
126 3bws_A Protein LP49; two-domai 100.0 4.4E-26 1.5E-30 177.6 23.0 193 3-204 177-394 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.6E-24 1.9E-28 165.3 25.7 188 7-204 143-348 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.2E-24 1.4E-28 166.0 23.5 191 2-203 185-390 (415)
129 4ggc_A P55CDC, cell division c 99.9 1.8E-24 6.3E-29 161.6 19.4 151 3-155 158-317 (318)
130 3vgz_A Uncharacterized protein 99.9 5.7E-22 1.9E-26 150.2 25.1 201 2-204 47-266 (353)
131 1nir_A Nitrite reductase; hemo 99.9 2.8E-22 9.7E-27 160.4 24.3 192 2-200 185-402 (543)
132 3u4y_A Uncharacterized protein 99.9 5.2E-21 1.8E-25 143.9 26.4 191 4-203 7-210 (331)
133 2oit_A Nucleoporin 214KDA; NH2 99.9 1.1E-22 3.8E-27 158.7 17.7 151 2-154 99-279 (434)
134 3vgz_A Uncharacterized protein 99.9 4.2E-21 1.4E-25 145.5 25.5 194 2-204 95-307 (353)
135 1pby_B Quinohemoprotein amine 99.9 1.7E-21 5.7E-26 146.6 21.5 190 2-204 40-314 (337)
136 1nir_A Nitrite reductase; hemo 99.9 4.9E-21 1.7E-25 153.3 25.1 193 3-204 145-359 (543)
137 1pby_B Quinohemoprotein amine 99.9 4E-21 1.4E-25 144.5 23.2 149 8-160 2-170 (337)
138 1jmx_B Amine dehydrogenase; ox 99.9 5.7E-21 1.9E-25 144.4 23.7 156 1-160 5-182 (349)
139 2ojh_A Uncharacterized protein 99.9 1.3E-21 4.6E-26 144.2 18.5 192 2-204 48-262 (297)
140 2ecf_A Dipeptidyl peptidase IV 99.9 1.6E-21 5.4E-26 161.5 20.2 195 2-204 43-325 (741)
141 3u4y_A Uncharacterized protein 99.9 1E-20 3.5E-25 142.3 22.9 193 2-203 46-255 (331)
142 1xfd_A DIP, dipeptidyl aminope 99.9 1.4E-21 4.9E-26 161.3 19.1 197 2-204 23-293 (723)
143 2ojh_A Uncharacterized protein 99.9 5.2E-21 1.8E-25 141.1 18.9 176 13-199 18-203 (297)
144 1ri6_A Putative isomerase YBHE 99.9 8.3E-20 2.8E-24 137.6 25.3 194 2-199 44-261 (343)
145 1ri6_A Putative isomerase YBHE 99.9 2.1E-20 7.1E-25 140.9 21.6 194 2-203 90-313 (343)
146 1jmx_B Amine dehydrogenase; ox 99.9 4.2E-20 1.4E-24 139.6 19.3 189 2-204 49-329 (349)
147 2z3z_A Dipeptidyl aminopeptida 99.8 9.7E-20 3.3E-24 150.1 18.7 193 3-202 89-345 (706)
148 2ecf_A Dipeptidyl peptidase IV 99.8 4.2E-20 1.4E-24 153.0 16.4 190 2-199 115-366 (741)
149 3hfq_A Uncharacterized protein 99.8 1.5E-18 5E-23 131.5 22.7 195 2-200 46-271 (347)
150 3hfq_A Uncharacterized protein 99.8 3.5E-18 1.2E-22 129.4 24.4 195 2-204 92-323 (347)
151 1k32_A Tricorn protease; prote 99.8 2.1E-19 7.2E-24 154.0 17.3 188 3-202 303-504 (1045)
152 1xfd_A DIP, dipeptidyl aminope 99.8 2.1E-19 7.2E-24 148.4 16.3 196 2-202 67-347 (723)
153 1jof_A Carboxy-CIS,CIS-muconat 99.8 3E-18 1E-22 130.9 20.6 198 2-203 46-295 (365)
154 3o4h_A Acylamino-acid-releasin 99.8 3.1E-19 1.1E-23 144.1 15.3 190 3-204 29-231 (582)
155 2z3z_A Dipeptidyl aminopeptida 99.8 1.3E-18 4.5E-23 143.4 18.7 194 2-203 127-394 (706)
156 3scy_A Hypothetical bacterial 99.8 5.1E-17 1.7E-21 123.7 26.0 196 2-203 56-296 (361)
157 1z68_A Fibroblast activation p 99.8 1.2E-19 4E-24 149.9 12.0 192 4-203 24-294 (719)
158 1k32_A Tricorn protease; prote 99.8 6.3E-18 2.1E-22 144.9 21.9 147 2-152 344-501 (1045)
159 3no2_A Uncharacterized protein 99.8 8.4E-18 2.9E-22 123.6 19.3 188 4-204 2-199 (276)
160 3scy_A Hypothetical bacterial 99.8 4.5E-17 1.5E-21 124.0 22.7 192 6-204 108-343 (361)
161 3o4h_A Acylamino-acid-releasin 99.8 4E-18 1.4E-22 137.7 16.4 182 8-198 76-274 (582)
162 1jof_A Carboxy-CIS,CIS-muconat 99.8 6.7E-16 2.3E-20 117.9 27.8 194 2-202 89-343 (365)
163 1z68_A Fibroblast activation p 99.8 1.3E-18 4.5E-23 143.7 12.5 197 2-202 66-348 (719)
164 1q7f_A NHL, brain tumor CG1071 99.8 5.5E-16 1.9E-20 114.3 24.0 188 4-201 86-281 (286)
165 4a5s_A Dipeptidyl peptidase 4 99.8 2E-17 6.8E-22 137.2 16.8 193 3-202 24-296 (740)
166 3fvz_A Peptidyl-glycine alpha- 99.8 2.7E-16 9.3E-21 118.4 21.2 200 1-204 29-281 (329)
167 3pe7_A Oligogalacturonate lyas 99.8 1.6E-16 5.4E-21 121.9 19.1 195 2-203 42-276 (388)
168 3fvz_A Peptidyl-glycine alpha- 99.7 3.8E-16 1.3E-20 117.6 19.4 196 1-201 96-323 (329)
169 3azo_A Aminopeptidase; POP fam 99.7 1.3E-16 4.5E-21 130.6 17.9 193 5-202 88-327 (662)
170 1q7f_A NHL, brain tumor CG1071 99.7 1E-14 3.5E-19 107.5 25.8 190 2-200 36-238 (286)
171 4a5s_A Dipeptidyl peptidase 4 99.7 1.5E-16 5E-21 132.0 17.0 197 3-203 69-356 (740)
172 2oiz_A Aromatic amine dehydrog 99.7 3E-15 1E-19 114.1 21.0 210 1-223 55-357 (361)
173 3azo_A Aminopeptidase; POP fam 99.7 7.2E-16 2.5E-20 126.2 16.7 191 2-203 136-372 (662)
174 1xip_A Nucleoporin NUP159; bet 99.7 7.9E-16 2.7E-20 117.3 14.1 169 2-186 44-230 (388)
175 3c5m_A Oligogalacturonate lyas 99.7 3.5E-15 1.2E-19 114.6 17.7 196 2-204 42-277 (396)
176 1rwi_B Serine/threonine-protei 99.7 7.1E-15 2.4E-19 107.3 18.5 194 2-203 73-267 (270)
177 2dg1_A DRP35, lactonase; beta 99.7 5E-14 1.7E-18 105.9 22.9 194 2-203 51-265 (333)
178 3dsm_A Uncharacterized protein 99.7 3.6E-14 1.2E-18 106.8 21.7 194 2-204 90-305 (328)
179 3e5z_A Putative gluconolactona 99.7 2.5E-14 8.4E-19 106.0 20.2 187 3-203 35-248 (296)
180 2xdw_A Prolyl endopeptidase; a 99.7 3E-14 1E-18 117.7 22.6 195 2-203 131-371 (710)
181 3pe7_A Oligogalacturonate lyas 99.7 3E-14 1E-18 109.2 20.6 198 2-203 87-332 (388)
182 3dsm_A Uncharacterized protein 99.7 2.8E-14 9.7E-19 107.3 19.5 187 6-203 53-256 (328)
183 1rwi_B Serine/threonine-protei 99.6 2.5E-14 8.5E-19 104.4 17.8 192 2-203 30-225 (270)
184 3c5m_A Oligogalacturonate lyas 99.6 6.4E-15 2.2E-19 113.1 14.3 191 3-203 88-332 (396)
185 2dg1_A DRP35, lactonase; beta 99.6 2.9E-14 9.9E-19 107.2 16.1 187 3-200 13-213 (333)
186 1qks_A Cytochrome CD1 nitrite 99.6 1.7E-12 5.9E-17 104.2 26.3 200 2-201 203-422 (567)
187 2gop_A Trilobed protease; beta 99.6 1.3E-13 4.5E-18 104.1 18.2 180 3-203 66-294 (347)
188 2hz6_A Endoplasmic reticulum t 99.6 3.4E-16 1.2E-20 119.7 2.9 184 6-204 8-196 (369)
189 1qks_A Cytochrome CD1 nitrite 99.6 3.5E-12 1.2E-16 102.3 26.0 189 7-204 167-377 (567)
190 2bkl_A Prolyl endopeptidase; m 99.6 2.4E-13 8.1E-18 112.1 19.7 189 4-202 76-306 (695)
191 3e5z_A Putative gluconolactona 99.6 6.4E-13 2.2E-17 98.4 20.2 189 2-203 75-289 (296)
192 2gop_A Trilobed protease; beta 99.6 2.4E-13 8.1E-18 102.7 17.0 161 16-197 42-250 (347)
193 3no2_A Uncharacterized protein 99.6 1.8E-12 6E-17 95.2 20.5 176 3-187 44-230 (276)
194 2z2n_A Virginiamycin B lyase; 99.6 5.5E-12 1.9E-16 93.0 22.8 190 2-203 21-215 (299)
195 2bkl_A Prolyl endopeptidase; m 99.5 1.9E-13 6.5E-18 112.7 15.1 188 2-199 127-348 (695)
196 2mad_H Methylamine dehydrogena 99.5 8E-12 2.7E-16 95.5 23.0 191 1-204 71-354 (373)
197 3hrp_A Uncharacterized protein 99.5 2.9E-12 1E-16 99.2 19.8 197 1-203 136-357 (409)
198 2oiz_A Aromatic amine dehydrog 99.5 4.2E-12 1.4E-16 96.8 19.9 177 15-202 29-232 (361)
199 2xdw_A Prolyl endopeptidase; a 99.5 3.7E-12 1.3E-16 105.3 20.8 192 2-202 177-416 (710)
200 2z2n_A Virginiamycin B lyase; 99.5 3.1E-11 1.1E-15 88.9 22.9 188 2-199 63-254 (299)
201 3g4e_A Regucalcin; six bladed 99.5 2.7E-11 9.3E-16 89.7 21.9 188 6-204 24-233 (297)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.1E-11 3.9E-16 92.1 19.6 187 3-201 78-300 (314)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 5.6E-12 1.9E-16 93.8 17.5 194 2-203 24-259 (314)
204 2qc5_A Streptogramin B lactona 99.5 9.4E-11 3.2E-15 86.4 22.7 191 2-203 26-220 (300)
205 2qc5_A Streptogramin B lactona 99.4 1.5E-10 5.1E-15 85.3 23.0 190 2-202 68-261 (300)
206 1xip_A Nucleoporin NUP159; bet 99.4 3.3E-12 1.1E-16 97.4 14.0 146 38-203 39-194 (388)
207 1yr2_A Prolyl oligopeptidase; 99.4 1.5E-11 5.1E-16 102.1 18.6 188 2-199 169-392 (741)
208 3hrp_A Uncharacterized protein 99.4 5.3E-11 1.8E-15 92.1 20.5 194 1-198 176-408 (409)
209 3c75_H MADH, methylamine dehyd 99.4 1.3E-11 4.4E-16 95.4 16.1 107 6-115 84-213 (426)
210 2iwa_A Glutamine cyclotransfer 99.4 8.4E-11 2.9E-15 85.0 19.3 193 3-202 28-239 (266)
211 3sjl_D Methylamine dehydrogena 99.4 1.5E-10 5.2E-15 88.1 20.8 192 4-202 41-258 (386)
212 2qe8_A Uncharacterized protein 99.4 4.2E-11 1.4E-15 90.6 15.8 194 2-203 23-281 (343)
213 3g4e_A Regucalcin; six bladed 99.4 8.9E-11 3E-15 87.0 16.9 178 2-188 60-261 (297)
214 1kb0_A Quinohemoprotein alcoho 99.3 2.5E-10 8.6E-15 93.8 20.6 181 16-204 189-511 (677)
215 2ghs_A AGR_C_1268P; regucalcin 99.3 7E-10 2.4E-14 83.3 21.5 185 7-203 61-262 (326)
216 1yiq_A Quinohemoprotein alcoho 99.3 4.7E-10 1.6E-14 92.3 21.7 181 16-204 182-509 (689)
217 3nol_A Glutamine cyclotransfer 99.3 4E-10 1.4E-14 80.8 18.0 179 6-189 52-245 (262)
218 3iuj_A Prolyl endopeptidase; h 99.3 6.9E-11 2.4E-15 97.5 16.1 189 2-202 135-361 (693)
219 1yr2_A Prolyl oligopeptidase; 99.3 4.5E-10 1.5E-14 93.3 19.8 190 3-203 216-444 (741)
220 1mda_H Methylamine dehydrogena 99.3 5.5E-10 1.9E-14 84.9 18.5 190 6-204 31-350 (368)
221 3dr2_A Exported gluconolactona 99.3 6E-10 2E-14 82.8 17.6 185 4-203 53-269 (305)
222 3nok_A Glutaminyl cyclase; bet 99.3 1E-09 3.4E-14 78.7 17.5 175 6-188 64-254 (268)
223 3sjl_D Methylamine dehydrogena 99.3 5.2E-10 1.8E-14 85.1 16.7 193 2-204 143-367 (386)
224 1npe_A Nidogen, entactin; glyc 99.2 3.8E-08 1.3E-12 71.6 25.6 190 7-204 48-242 (267)
225 3mbr_X Glutamine cyclotransfer 99.2 3.3E-09 1.1E-13 75.4 19.1 178 7-189 31-224 (243)
226 3dr2_A Exported gluconolactona 99.2 1.1E-09 3.8E-14 81.3 17.5 181 2-197 92-303 (305)
227 2qe8_A Uncharacterized protein 99.2 3.2E-10 1.1E-14 85.7 14.6 191 2-197 73-318 (343)
228 2ghs_A AGR_C_1268P; regucalcin 99.2 3.2E-09 1.1E-13 79.7 18.7 174 4-190 98-293 (326)
229 2mad_H Methylamine dehydrogena 99.2 3.2E-08 1.1E-12 75.6 24.5 175 18-202 48-245 (373)
230 3q7m_A Lipoprotein YFGL, BAMB; 99.2 1.4E-08 4.7E-13 77.6 21.2 186 7-203 53-261 (376)
231 2hz6_A Endoplasmic reticulum t 99.2 4E-12 1.4E-16 97.1 0.9 141 50-203 10-152 (369)
232 3iuj_A Prolyl endopeptidase; h 99.1 6.1E-09 2.1E-13 85.9 19.1 189 6-203 184-408 (693)
233 1npe_A Nidogen, entactin; glyc 99.1 1.8E-07 6E-12 68.0 24.2 190 7-202 1-200 (267)
234 3q7m_A Lipoprotein YFGL, BAMB; 99.1 5.4E-08 1.8E-12 74.3 21.4 183 8-204 144-341 (376)
235 3hxj_A Pyrrolo-quinoline quino 99.1 1.2E-08 4E-13 76.3 16.9 177 8-203 108-286 (330)
236 1kv9_A Type II quinohemoprotei 99.1 3.4E-08 1.2E-12 81.1 20.6 181 16-204 177-492 (668)
237 3nok_A Glutaminyl cyclase; bet 99.1 3.5E-08 1.2E-12 70.8 17.8 163 29-204 45-214 (268)
238 2ad6_A Methanol dehydrogenase 99.1 6.5E-08 2.2E-12 78.0 21.3 180 16-204 175-498 (571)
239 1yiq_A Quinohemoprotein alcoho 99.1 1.8E-08 6E-13 83.1 18.1 156 6-163 245-515 (689)
240 2iwa_A Glutamine cyclotransfer 99.1 6.7E-08 2.3E-12 69.9 19.0 168 28-204 10-185 (266)
241 2ece_A 462AA long hypothetical 99.1 7.9E-08 2.7E-12 74.1 20.3 146 5-153 147-352 (462)
242 1kb0_A Quinohemoprotein alcoho 99.0 1.5E-08 5.2E-13 83.2 16.9 189 8-204 78-350 (677)
243 3nol_A Glutamine cyclotransfer 99.0 3.6E-08 1.2E-12 70.7 16.6 164 29-204 33-205 (262)
244 1fwx_A Nitrous oxide reductase 99.0 3.2E-08 1.1E-12 78.7 16.9 185 6-200 100-361 (595)
245 2ece_A 462AA long hypothetical 99.0 2.3E-07 7.8E-12 71.6 20.5 190 8-201 97-353 (462)
246 1w6s_A Methanol dehydrogenase 99.0 2.5E-07 8.6E-12 74.8 21.4 181 15-204 180-507 (599)
247 3mbr_X Glutamine cyclotransfer 99.0 2.7E-07 9.2E-12 65.6 18.6 166 28-204 10-183 (243)
248 1fwx_A Nitrous oxide reductase 99.0 6E-08 2E-12 77.2 16.7 184 15-204 173-435 (595)
249 1ijq_A LDL receptor, low-densi 99.0 3.7E-06 1.3E-10 62.7 25.7 188 10-202 4-197 (316)
250 3c75_H MADH, methylamine dehyd 98.9 2.8E-08 9.5E-13 76.9 14.1 101 59-162 99-218 (426)
251 1mda_H Methylamine dehydrogena 98.9 2.1E-08 7.2E-13 76.3 12.1 164 2-168 71-361 (368)
252 3hxj_A Pyrrolo-quinoline quino 98.9 1.2E-07 4E-12 70.8 15.9 176 9-202 149-326 (330)
253 3v65_B Low-density lipoprotein 98.9 2.3E-06 8E-11 65.6 23.2 191 6-203 127-321 (386)
254 3v64_C Agrin; beta propeller, 98.9 4.8E-06 1.7E-10 63.0 24.6 190 6-203 84-278 (349)
255 3v64_C Agrin; beta propeller, 98.9 8.1E-06 2.8E-10 61.8 25.6 189 9-202 46-236 (349)
256 3v65_B Low-density lipoprotein 98.9 3.2E-06 1.1E-10 64.9 23.2 189 9-202 89-279 (386)
257 1flg_A Protein (quinoprotein e 98.9 1E-06 3.4E-11 71.2 21.2 138 59-204 291-520 (582)
258 3p5b_L Low density lipoprotein 98.8 1.4E-05 4.9E-10 61.6 26.7 189 9-203 85-280 (400)
259 1kv9_A Type II quinohemoprotei 98.8 3.7E-07 1.3E-11 75.0 17.4 189 7-204 66-337 (668)
260 2fp8_A Strictosidine synthase; 98.8 4.2E-06 1.4E-10 62.4 20.9 187 6-202 91-315 (322)
261 2fp8_A Strictosidine synthase; 98.8 1.9E-06 6.6E-11 64.3 18.4 187 2-199 25-268 (322)
262 2p4o_A Hypothetical protein; p 98.7 8.7E-06 3E-10 60.3 20.9 190 2-203 38-244 (306)
263 1w6s_A Methanol dehydrogenase 98.7 2.1E-06 7.2E-11 69.5 17.9 194 8-204 63-346 (599)
264 1ijq_A LDL receptor, low-densi 98.7 3.7E-05 1.3E-09 57.3 25.3 188 7-203 42-241 (316)
265 2ad6_A Methanol dehydrogenase 98.6 8.2E-06 2.8E-10 65.8 19.4 150 7-160 115-342 (571)
266 3p5b_L Low density lipoprotein 98.6 7.7E-05 2.6E-09 57.5 24.2 190 7-203 124-323 (400)
267 3sov_A LRP-6, low-density lipo 98.6 6E-05 2E-09 56.2 22.7 183 16-202 12-199 (318)
268 3qqz_A Putative uncharacterize 98.6 1.8E-05 6.3E-10 56.9 18.9 166 34-201 24-205 (255)
269 3m0c_C LDL receptor, low-densi 98.6 0.0001 3.6E-09 61.6 25.4 184 15-203 402-592 (791)
270 1flg_A Protein (quinoprotein e 98.6 1.5E-05 5.2E-10 64.4 19.3 164 17-186 291-546 (582)
271 3qqz_A Putative uncharacterize 98.5 9E-05 3.1E-09 53.3 22.8 188 6-199 38-252 (255)
272 3tc9_A Hypothetical hydrolase; 98.5 1.3E-05 4.3E-10 62.5 17.2 142 8-152 150-300 (430)
273 1n7d_A LDL receptor, low-densi 98.5 2.8E-06 9.6E-11 70.1 14.1 181 15-201 384-572 (699)
274 3sov_A LRP-6, low-density lipo 98.5 0.00014 4.9E-09 54.2 23.8 189 7-203 47-241 (318)
275 3m0c_C LDL receptor, low-densi 98.5 0.00035 1.2E-08 58.4 26.2 192 7-203 436-635 (791)
276 2xe4_A Oligopeptidase B; hydro 98.5 2.3E-05 8E-10 65.3 18.9 188 3-198 181-398 (751)
277 4a0p_A LRP6, LRP-6, low-densit 98.5 0.00031 1.1E-08 57.3 25.6 192 6-203 5-200 (628)
278 4hw6_A Hypothetical protein, I 98.5 3E-05 1E-09 60.4 18.3 190 7-202 153-375 (433)
279 3amr_A 3-phytase; beta-propell 98.4 0.00023 8E-09 53.3 22.1 184 8-199 41-262 (355)
280 1k3i_A Galactose oxidase precu 98.4 2.5E-05 8.6E-10 64.1 16.4 193 6-202 197-443 (656)
281 2xe4_A Oligopeptidase B; hydro 98.4 1.7E-05 5.7E-10 66.2 15.2 112 38-154 175-305 (751)
282 2p9w_A MAL S 1 allergenic prot 98.4 0.00033 1.1E-08 52.0 23.7 145 6-153 24-215 (334)
283 1n7d_A LDL receptor, low-densi 98.3 1.1E-05 3.7E-10 66.7 13.6 190 8-204 419-618 (699)
284 3kya_A Putative phosphatase; s 98.3 9.6E-05 3.3E-09 58.2 18.0 145 6-152 151-340 (496)
285 2p4o_A Hypothetical protein; p 98.3 0.00016 5.5E-09 53.4 18.3 150 2-156 78-244 (306)
286 4a2l_A BT_4663, two-component 98.3 0.0011 3.9E-08 55.6 24.2 182 10-203 370-574 (795)
287 2p9w_A MAL S 1 allergenic prot 98.3 0.00021 7.1E-09 53.1 17.3 161 37-200 13-215 (334)
288 4a2l_A BT_4663, two-component 98.2 0.00062 2.1E-08 57.2 21.9 183 10-202 323-528 (795)
289 1k3i_A Galactose oxidase precu 98.2 0.00014 4.7E-09 59.8 17.0 181 5-189 252-530 (656)
290 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0022 7.5E-08 52.4 25.4 188 7-203 49-240 (628)
291 3v9f_A Two-component system se 98.1 0.0012 4.1E-08 55.3 21.3 185 10-203 376-571 (781)
292 3s94_A LRP-6, low-density lipo 98.1 0.0029 9.8E-08 51.6 22.7 183 15-203 16-205 (619)
293 3tc9_A Hypothetical hydrolase; 98.1 0.00023 7.9E-09 55.4 15.0 155 38-200 138-301 (430)
294 3v9f_A Two-component system se 98.0 0.0024 8.1E-08 53.5 21.4 185 6-202 417-613 (781)
295 4hw6_A Hypothetical protein, I 98.0 0.002 6.7E-08 50.2 19.0 161 36-199 227-432 (433)
296 3amr_A 3-phytase; beta-propell 98.0 0.0021 7.2E-08 48.2 18.1 142 16-160 98-271 (355)
297 2vpj_A Kelch-like protein 12; 98.0 0.0025 8.4E-08 46.8 21.8 184 6-202 62-280 (301)
298 2xn4_A Kelch-like protein 2; s 97.9 0.0018 6.2E-08 47.6 17.2 186 6-203 61-279 (302)
299 3ii7_A Kelch-like protein 7; p 97.9 0.0019 6.6E-08 47.5 16.9 186 6-203 55-275 (306)
300 2vpj_A Kelch-like protein 12; 97.9 0.0025 8.4E-08 46.8 17.3 184 7-202 15-233 (301)
301 3pbp_A Nucleoporin NUP82; beta 97.9 0.0038 1.3E-07 48.0 18.0 132 16-149 40-208 (452)
302 2xbg_A YCF48-like protein; pho 97.9 0.0041 1.4E-07 46.4 21.3 152 34-198 160-320 (327)
303 3sre_A PON1, serum paraoxonase 97.8 0.0063 2.1E-07 46.0 17.8 135 15-153 81-252 (355)
304 2xn4_A Kelch-like protein 2; s 97.7 0.006 2.1E-07 44.8 16.5 185 6-202 15-231 (302)
305 2be1_A Serine/threonine-protei 97.7 0.0034 1.2E-07 47.0 14.6 193 7-204 10-235 (339)
306 4asc_A Kelch repeat and BTB do 97.6 0.004 1.4E-07 46.1 14.7 184 6-202 45-279 (315)
307 1zgk_A Kelch-like ECH-associat 97.6 0.0073 2.5E-07 44.5 16.1 183 7-202 71-289 (308)
308 3ii7_A Kelch-like protein 7; p 97.6 0.01 3.6E-07 43.6 18.0 184 7-202 12-227 (306)
309 3kya_A Putative phosphatase; s 97.6 0.0028 9.5E-08 50.0 14.0 155 39-199 141-340 (496)
310 3s94_A LRP-6, low-density lipo 97.6 0.02 7E-07 46.7 26.6 190 7-203 361-554 (619)
311 2xzh_A Clathrin heavy chain 1; 97.6 0.012 4E-07 43.8 21.6 188 9-204 80-294 (365)
312 1zgk_A Kelch-like ECH-associat 97.6 0.0063 2.1E-07 44.9 15.0 185 5-202 23-242 (308)
313 1bpo_A Protein (clathrin); cla 97.5 0.018 6.3E-07 44.5 21.2 188 9-204 79-293 (494)
314 1tl2_A L10, protein (tachylect 97.5 0.011 3.7E-07 41.4 14.8 130 8-147 5-157 (236)
315 2woz_A Kelch repeat and BTB do 97.5 0.015 5.1E-07 43.0 16.0 185 6-202 56-289 (318)
316 3ei3_A DNA damage-binding prot 97.4 0.019 6.3E-07 50.4 17.8 175 17-200 807-999 (1158)
317 2ism_A Putative oxidoreductase 97.3 0.033 1.1E-06 42.0 18.3 94 1-98 36-152 (352)
318 3pbp_A Nucleoporin NUP82; beta 97.3 0.041 1.4E-06 42.4 17.2 141 50-197 33-209 (452)
319 2uvk_A YJHT; unknown function, 97.2 0.038 1.3E-06 41.5 16.3 137 59-204 168-346 (357)
320 4asc_A Kelch repeat and BTB do 97.2 0.038 1.3E-06 40.7 17.4 181 9-202 7-223 (315)
321 2xbg_A YCF48-like protein; pho 97.1 0.045 1.5E-06 40.8 15.8 111 34-150 202-319 (327)
322 2ism_A Putative oxidoreductase 97.1 0.046 1.6E-06 41.2 15.3 101 36-140 30-152 (352)
323 3sre_A PON1, serum paraoxonase 97.1 0.059 2E-06 40.7 17.4 157 36-200 49-252 (355)
324 2woz_A Kelch repeat and BTB do 97.0 0.062 2.1E-06 39.6 16.9 181 8-202 17-233 (318)
325 2zwa_A Leucine carboxyl methyl 96.9 0.13 4.6E-06 42.5 17.9 193 6-203 397-638 (695)
326 1xi4_A Clathrin heavy chain; a 96.9 0.061 2.1E-06 47.8 15.5 194 3-203 72-292 (1630)
327 2g8s_A Glucose/sorbosone dehyd 96.7 0.13 4.3E-06 38.8 15.2 102 36-140 17-147 (353)
328 1tl2_A L10, protein (tachylect 96.7 0.045 1.5E-06 38.3 10.9 138 2-151 47-206 (236)
329 3ei3_A DNA damage-binding prot 96.6 0.32 1.1E-05 42.8 23.0 206 9-223 525-746 (1158)
330 3a9g_A Putative uncharacterize 96.6 0.16 5.4E-06 38.3 16.0 102 36-140 28-152 (354)
331 1cru_A Protein (soluble quinop 96.3 0.3 1E-05 38.2 15.8 98 1-99 32-162 (454)
332 2uvk_A YJHT; unknown function, 96.3 0.24 8.1E-06 37.1 14.4 92 6-101 19-128 (357)
333 2zwa_A Leucine carboxyl methyl 96.2 0.37 1.3E-05 40.0 15.6 150 6-156 451-638 (695)
334 2xzh_A Clathrin heavy chain 1; 96.1 0.29 9.8E-06 36.5 13.9 141 16-157 179-336 (365)
335 3das_A Putative oxidoreductase 96.0 0.32 1.1E-05 36.6 17.6 106 35-141 30-158 (347)
336 2be1_A Serine/threonine-protei 96.0 0.022 7.7E-07 42.6 7.1 109 93-204 11-134 (339)
337 2g8s_A Glucose/sorbosone dehyd 95.4 0.31 1.1E-05 36.7 11.5 137 1-139 23-214 (353)
338 3a9g_A Putative uncharacterize 95.4 0.6 2.1E-05 35.1 19.9 135 1-139 34-214 (354)
339 1cru_A Protein (soluble quinop 95.2 0.81 2.8E-05 35.8 19.6 105 36-141 26-162 (454)
340 1bpo_A Protein (clathrin); cla 94.8 1.1 3.6E-05 35.0 16.7 140 16-156 178-334 (494)
341 3das_A Putative oxidoreductase 94.7 0.98 3.4E-05 34.0 16.6 137 1-139 37-218 (347)
342 3ott_A Two-component system se 93.4 3 0.0001 34.8 19.7 177 9-202 75-262 (758)
343 1xi4_A Clathrin heavy chain; a 93.0 3.8 0.00013 37.1 14.0 143 16-160 124-296 (1630)
344 3sbq_A Nitrous-oxide reductase 93.0 3 0.0001 33.7 13.8 122 18-141 299-453 (638)
345 4gq2_M Nucleoporin NUP120; bet 92.3 5.1 0.00017 34.6 14.2 37 124-160 237-273 (950)
346 2wg3_C Hedgehog-interacting pr 91.8 3.8 0.00013 32.1 13.5 106 37-142 14-158 (463)
347 4gq2_M Nucleoporin NUP120; bet 91.3 5.4 0.00018 34.5 13.0 37 38-75 237-273 (950)
348 3qhy_B Beta-lactamase inhibito 90.7 3.6 0.00012 29.8 17.4 166 16-201 80-247 (282)
349 3qhy_B Beta-lactamase inhibito 89.9 4.3 0.00015 29.4 16.2 165 16-200 41-207 (282)
350 3sbq_A Nitrous-oxide reductase 88.9 0.9 3.1E-05 36.5 5.9 77 123-201 323-409 (638)
351 3q6k_A 43.2 kDa salivary prote 88.0 7.4 0.00025 29.7 17.3 161 37-200 87-306 (381)
352 3ott_A Two-component system se 87.3 12 0.00041 31.2 21.8 137 12-155 388-547 (758)
353 3s25_A Hypothetical 7-bladed b 84.8 9.6 0.00033 27.9 14.8 127 16-157 36-180 (302)
354 3s25_A Hypothetical 7-bladed b 84.1 10 0.00036 27.7 17.4 162 17-202 88-257 (302)
355 3b7f_A Glycosyl hydrolase, BNR 80.2 17 0.00058 27.4 15.2 163 38-204 178-375 (394)
356 1sqj_A OXG-RCBH, oligoxylogluc 78.6 29 0.001 29.3 15.9 63 36-99 14-83 (789)
357 3b7f_A Glycosyl hydrolase, BNR 78.0 20 0.00068 27.0 20.3 137 8-147 23-202 (394)
358 4fhn_B Nucleoporin NUP120; pro 77.9 6.1 0.00021 34.9 7.0 37 124-160 239-275 (1139)
359 3zwu_A Alkaline phosphatase PH 76.6 17 0.00058 29.6 8.7 58 82-140 478-548 (592)
360 1suu_A DNA gyrase subunit A; t 75.8 21 0.00072 26.2 18.9 186 6-200 7-231 (312)
361 4fhn_B Nucleoporin NUP120; pro 75.0 2.8 9.6E-05 37.0 4.1 37 38-75 239-275 (1139)
362 3uc1_A DNA gyrase subunit A; D 74.6 24 0.00081 26.2 17.8 184 6-198 2-226 (327)
363 3no0_A DNA gyrase subunit A; D 74.1 22 0.00075 25.6 17.1 114 35-152 66-195 (276)
364 3q6k_A 43.2 kDa salivary prote 73.8 27 0.00094 26.6 16.1 135 18-153 124-306 (381)
365 2wg3_C Hedgehog-interacting pr 73.7 31 0.001 27.1 11.3 99 1-101 19-159 (463)
366 3uc1_A DNA gyrase subunit A; D 73.4 25 0.00087 26.0 18.6 144 6-152 108-278 (327)
367 4a9v_A PHOX; hydrolase, beta-p 73.1 28 0.00095 28.3 8.9 60 81-141 477-549 (592)
368 3f7f_A Nucleoporin NUP120; nuc 70.4 7 0.00024 32.5 5.1 36 38-76 223-258 (729)
369 3f7f_A Nucleoporin NUP120; nuc 68.0 5.9 0.0002 33.0 4.2 27 7-33 231-257 (729)
370 3zwu_A Alkaline phosphatase PH 67.7 27 0.00094 28.4 8.0 58 39-98 478-548 (592)
371 3a0f_A Xyloglucanase; beta-pro 58.1 83 0.0028 26.4 16.8 64 34-98 18-93 (763)
372 4a9v_A PHOX; hydrolase, beta-p 57.6 76 0.0026 25.8 8.8 60 37-98 476-548 (592)
373 3no0_A DNA gyrase subunit A; D 57.2 51 0.0017 23.7 16.8 143 6-152 79-245 (276)
374 1zi0_A DNA gyrase subunit A; b 46.8 82 0.0028 23.0 19.8 183 7-198 3-224 (307)
375 4gz8_A Semaphorin-3A; multi-do 46.7 1.1E+02 0.0039 25.3 8.3 55 8-63 430-495 (667)
376 1q47_A Semaphorin 3A; beta pro 44.6 64 0.0022 25.6 6.4 67 81-147 405-486 (495)
377 1zvt_A Topoisomerase IV subuni 44.2 83 0.0028 22.3 14.9 144 50-200 3-163 (256)
378 1q47_A Semaphorin 3A; beta pro 42.4 1.2E+02 0.0041 24.1 7.6 56 7-63 421-487 (495)
379 3nvq_A Semaphorin-7A; beta-pro 39.7 99 0.0034 25.2 6.8 55 8-63 381-444 (590)
380 3nvq_A Semaphorin-7A; beta-pro 38.0 90 0.0031 25.4 6.3 53 93-145 381-441 (590)
381 2cn3_A Xyloglucanase, beta-1,4 34.7 2E+02 0.0069 24.0 15.8 104 37-141 23-151 (737)
382 4gz8_A Semaphorin-3A; multi-do 30.8 1.3E+02 0.0046 24.9 6.4 53 93-145 430-492 (667)
383 1ukf_A Avirulence protein AVRP 29.0 57 0.0019 22.0 3.2 35 36-70 118-152 (188)
384 1olz_A Semaphorin 4D; developm 28.1 2.4E+02 0.0083 23.4 7.5 52 93-144 416-473 (663)
385 1wp5_A Topoisomerase IV; broke 27.3 1.9E+02 0.0064 21.3 19.5 186 7-200 5-225 (323)
386 3al9_A Plexin-A2; beta-propell 26.8 87 0.003 25.2 4.6 63 82-144 402-472 (539)
387 3kci_A Probable E3 ubiquitin-p 24.4 2.3E+02 0.0077 21.3 20.2 139 10-152 65-240 (389)
388 3al9_A Plexin-A2; beta-propell 23.2 1.8E+02 0.0061 23.4 5.7 56 7-63 413-476 (539)
389 3ol2_B Plexin-B1; beta-propell 20.5 1.5E+02 0.005 23.8 4.7 55 94-148 402-461 (528)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=251.77 Aligned_cols=198 Identities=16% Similarity=0.223 Sum_probs=170.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec--cC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA--VN 78 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~ 78 (224)
++++++++|++|+.|++|++||+++++++..+ +|...|++++|+|++..+|++++.|++|++||++++++...+. .+
T Consensus 134 ~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~ 213 (344)
T 4gqb_B 134 SVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAP 213 (344)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeeccee
Confidence 45678899999999999999999999998888 8999999999999986789999999999999999998877764 45
Q ss_pred CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCC-CeEeeeecCCCcEEEECCCCCcc
Q psy11351 79 SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAG-TQLLGLRRRLPPVLYNTRSSSPV 157 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~v~d~~~~~~~ 157 (224)
...+.+++|+|.+++++++|+.||.|++||+++++.+..+.+|...|++++|+|++ ++|++++.|++|++||+++++.+
T Consensus 214 ~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 214 GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred eccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 56799999999778899999999999999999999889999999999999999998 57899999999999999998876
Q ss_pred eecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 158 AQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
....|.+.|.+ ++|+|.+..+|++++.|++|++|++.+....
T Consensus 294 ~~~~H~~~V~~-----v~~sp~~~~llas~s~D~~v~~w~v~~~~~~ 335 (344)
T 4gqb_B 294 RSQAHRDFVRD-----ATWSPLNHSLLTTVGWDHQVVHHVVPTEPLP 335 (344)
T ss_dssp EECCCSSCEEE-----EEECSSSTTEEEEEETTSCEEEEECCC----
T ss_pred EEcCCCCCEEE-----EEEeCCCCeEEEEEcCCCeEEEEECCCCCCC
Confidence 65578777654 7778854567889999999999999886553
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=247.25 Aligned_cols=191 Identities=16% Similarity=0.148 Sum_probs=164.1
Q ss_pred eEEEEEeCCCcEEEEeCCCCceeeEE-----eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCe
Q psy11351 8 KVLRVIGNDDHVISHDMASGDPIDFY-----LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPF 82 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i 82 (224)
+.+++|+.||+|+|||+++++..... +|.+.|++++|+|++ ++|++|+.|++|++||+++++.+..+.+|...|
T Consensus 94 ~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V 172 (344)
T 4gqb_B 94 RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQV 172 (344)
T ss_dssp TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCcCCce
Confidence 46889999999999999988765432 799999999999998 899999999999999999999999999999999
Q ss_pred EEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee--cCCCceeEEEEcCC-CCeEeeeecCCCcEEEECCCCCccee
Q psy11351 83 HAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY--GSCESCMSIRFNKA-GTQLLGLRRRLPPVLYNTRSSSPVAQ 159 (224)
Q Consensus 83 ~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~d~~v~v~d~~~~~~~~~ 159 (224)
.+++|+|++..++++++.|+.|++||+++++....+. .+...+.+++|+|+ +++|++++.|+.|++||+++++++..
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~ 252 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLS 252 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEE
T ss_pred EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEE
Confidence 9999999555789999999999999999987766654 35667999999995 56788999999999999999999988
Q ss_pred c-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 160 F-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 160 ~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+ .|...+.+ ++|+|+...+|++|+.|+.|++||+.+++..
T Consensus 253 ~~~h~~~v~~-----v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 253 SAVHSQCVTG-----LVFSPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp EECCSSCEEE-----EEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred EcCCCCCEEE-----EEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 8 57776654 6777744478999999999999999988764
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.7e-39 Score=239.27 Aligned_cols=197 Identities=13% Similarity=0.155 Sum_probs=172.2
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCC
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNS 79 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 79 (224)
+++++.+++|++++.||+|++||+++++.+..+ .|..+|.+++|+|++ ++|++|+.|++|++||+++++.+..+.+|.
T Consensus 19 ~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~ 97 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGEKVVDFEAHP 97 (304)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEEEEECCCCcEEEEEeCCC
Confidence 356778899999999999999999999888777 799999999999998 899999999999999999999999999999
Q ss_pred cCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCcee-eEeecCCCceeEEEEcC-CCCeEeeeecCCCcEEEECCCCCcc
Q psy11351 80 GPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEV-LMQYGSCESCMSIRFNK-AGTQLLGLRRRLPPVLYNTRSSSPV 157 (224)
Q Consensus 80 ~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~v~d~~~~~~~ 157 (224)
..|.+++|+| ++.++++|+.|+.|++||++++..+ ..+.+|...|.+++|+| ++..|++++.|+.|++||++++.+.
T Consensus 98 ~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 98 DYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (304)
T ss_dssp SCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS
T ss_pred CcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc
Confidence 9999999999 8899999999999999999987444 45667999999999999 5789999999999999999888776
Q ss_pred eec--ccCCcccceeeeEEEEeC-CCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 158 AQF--DHEGYYNSCTMKSCCFAG-TQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 158 ~~~--~~~~~~~~~~~~~~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
..+ .+...+. .+.|+| .++.+|++|+.|+.|++||+++++..
T Consensus 177 ~~~~~~~~~~v~-----~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~ 221 (304)
T 2ynn_A 177 FTLTTGQERGVN-----YVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (304)
T ss_dssp EEEECCCTTCEE-----EEEECCSTTCCEEEEEETTSEEEEEETTTTEEE
T ss_pred ceeccCCcCcEE-----EEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc
Confidence 665 2333333 255555 25789999999999999999998765
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.5e-39 Score=248.58 Aligned_cols=196 Identities=19% Similarity=0.220 Sum_probs=178.2
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
++.+.++++++|+.||+|++||+.+++....+ +|...|++++|+|++ ++|++|+.|++|++||+++++.+..+.+|..
T Consensus 115 ~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~ 193 (410)
T 1vyh_C 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFECIRTMHGHDH 193 (410)
T ss_dssp EECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCEEETTSSCEEECCCCCSS
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeEEEcCCCC
Confidence 34567889999999999999999999988877 899999999999998 8999999999999999999999999999999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 160 (224)
.|.+++|+| ++.++++|+.|+.|++||++++.....+.+|...|.++.|+|++.++++++.|+.|++||+++++....+
T Consensus 194 ~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~ 272 (410)
T 1vyh_C 194 NVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272 (410)
T ss_dssp CEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEe
Confidence 999999999 8899999999999999999999988889999999999999999999999999999999999999888777
Q ss_pred -ccCCcccceeeeEEEEeCC-------------------CCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 161 -DHEGYYNSCTMKSCCFAGT-------------------QDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 161 -~~~~~~~~~~~~~~~~~~~-------------------~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
.|...+.+ ++|+|. .+.+|++|+.|+.|++||+.+++..
T Consensus 273 ~~h~~~v~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 273 REHRHVVEC-----ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp CCCSSCEEE-----EEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred cCCCceEEE-----EEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 56666555 555552 1678999999999999999998765
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.9e-39 Score=240.40 Aligned_cols=195 Identities=16% Similarity=0.256 Sum_probs=178.0
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+..+.+.++++++.|++|++||+.+++.+..+ .|...+.+++|+|++ ++|++++.|+.|++||+++++....+..|..
T Consensus 87 ~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~ 165 (321)
T 3ow8_A 87 DISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLDTRGK 165 (321)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSEEEEEECSSS
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCceeEEecCCCc
Confidence 34566789999999999999999999988877 788899999999999 8999999999999999999998888888999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 160 (224)
.|.+++|+| ++++|++|+.||.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+
T Consensus 166 ~v~~~~~sp-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (321)
T 3ow8_A 166 FILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL 244 (321)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred eEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEE
Confidence 999999999 8999999999999999999999888888899999999999999999999999999999999999888777
Q ss_pred -ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 161 -DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 161 -~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
.|...+.+ ++|+| ++.+|++++.|+.|++||+.++++.
T Consensus 245 ~~h~~~v~~-----~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 245 SGHASWVLN-----VAFCP-DDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp CCCSSCEEE-----EEECT-TSSEEEEEETTSCEEEEETTTTEEE
T ss_pred cCCCCceEE-----EEECC-CCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 56666554 66777 7999999999999999999998765
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=241.67 Aligned_cols=190 Identities=18% Similarity=0.264 Sum_probs=175.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+.++++++|++|+.||+|++||+++++....+ .|...+.+++|+|++ ++|++|+.|+.|++||+++++.+..+.+|..
T Consensus 129 ~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~ 207 (321)
T 3ow8_A 129 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAM 207 (321)
T ss_dssp EECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred EECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEcccCC
Confidence 45677899999999999999999999887766 788899999999999 8999999999999999999999999999999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 160 (224)
+|.+++|+| ++.+|++++.|+.|++||+++.+....+.+|...|.+++|+|++++|++++.|+.|++||+++++++..+
T Consensus 208 ~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 208 PIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp CCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE
Confidence 999999999 8999999999999999999999888888899999999999999999999999999999999999998888
Q ss_pred -ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCC
Q psy11351 161 -DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 161 -~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~ 199 (224)
.|.+.+.+ ++|+| ++.+|++++.|+.|++||.+
T Consensus 287 ~~h~~~v~~-----v~~s~-~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 287 FDHQDQVWG-----VKYNG-NGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CCCSSCEEE-----EEECT-TSSEEEEEETTCCEEEEECC
T ss_pred cCCCCcEEE-----EEECC-CCCEEEEEeCCCeEEEEeCC
Confidence 67776654 66777 79999999999999999974
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.7e-38 Score=237.37 Aligned_cols=195 Identities=15% Similarity=0.188 Sum_probs=171.5
Q ss_pred CCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc-cceeeccCCc
Q psy11351 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE-EATELAVNSG 80 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~ 80 (224)
...++++|++|+.|++|++||+++++.+..+ +|...|++++|+|++ ++|++|+.|++|++||++++. ....+.+|..
T Consensus 63 ~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~ 141 (304)
T 2ynn_A 63 FIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHEH 141 (304)
T ss_dssp EEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEEEECCCCS
T ss_pred EeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhhhhcccCC
Confidence 3456789999999999999999999988877 899999999999998 899999999999999998874 4567889999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee-cCCCceeEEEEcC--CCCeEeeeecCCCcEEEECCCCCcc
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY-GSCESCMSIRFNK--AGTQLLGLRRRLPPVLYNTRSSSPV 157 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~v~v~d~~~~~~~ 157 (224)
.|.+++|+|.++.+|++|+.|+.|++||+++......+. .+...+..+.|+| ++.+|++++.|+.|++||+++++++
T Consensus 142 ~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~ 221 (304)
T 2ynn_A 142 FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (304)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc
Confidence 999999999667899999999999999998876655554 4667899999987 6789999999999999999999988
Q ss_pred eec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 158 AQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 158 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
..+ .|...+.. ++|+| ++.+|++|+.||.|++||+.+++..
T Consensus 222 ~~~~~h~~~v~~-----~~~~p-~~~~l~s~s~Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 222 ATLEGHMSNVSF-----AVFHP-TLPIIISGSEDGTLKIWNSSTYKVE 263 (304)
T ss_dssp EEEECCSSCEEE-----EEECS-SSSEEEEEETTSCEEEEETTTCCEE
T ss_pred eeeCCCCCCEEE-----EEECC-CCCEEEEEcCCCeEEEEECCCCcee
Confidence 888 57666554 66777 7899999999999999999998775
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.3e-39 Score=244.80 Aligned_cols=197 Identities=16% Similarity=0.242 Sum_probs=173.5
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceee--ccC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATEL--AVN 78 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~ 78 (224)
++.+++++|++|+.|++|++||+++++++..+ +|...|++++|+|++..++++++.|++|++||++++++...+ ..+
T Consensus 146 ~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~ 225 (357)
T 4g56_B 146 SVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCAS 225 (357)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTC
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccc
Confidence 45678899999999999999999999988887 899999999999998678999999999999999998876554 456
Q ss_pred CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCC-CeEeeeecCCCcEEEECCCCCcc
Q psy11351 79 SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAG-TQLLGLRRRLPPVLYNTRSSSPV 157 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~v~d~~~~~~~ 157 (224)
...+.+++|+|+++.+|++|+.|+.|++||+++++....+..|...|++++|+|++ ++|++++.|++|++||+++++.+
T Consensus 226 ~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 226 DTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp CSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred cccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 67899999999667899999999999999999998888888999999999999987 57889999999999999999888
Q ss_pred eecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 158 AQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
..+.|.+.+++ ++|+|.++.+|++++.|+.|++|++.+...
T Consensus 306 ~~~~H~~~V~~-----vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 306 RDLSHRDFVTG-----VAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EECCCSSCEEE-----EEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred EECCCCCCEEE-----EEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 87788877654 778886789999999999999999977543
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-38 Score=247.60 Aligned_cols=195 Identities=14% Similarity=0.185 Sum_probs=178.6
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
++.+.+++|++|+.|++|++||+.+++++..+ +|...|.+++|+|++ ++|++|+.|++|++||+++++++..+.+|..
T Consensus 157 ~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~ 235 (410)
T 1vyh_C 157 SFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235 (410)
T ss_dssp EECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEeCCCc
Confidence 45667889999999999999999999988877 899999999999998 8999999999999999999999999999999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCC--------------------CCeEeee
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKA--------------------GTQLLGL 140 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~ 140 (224)
.|.++.++| ++.++++|+.|+.|++||+++++....+..|...|.+++|+|+ +.+|+++
T Consensus 236 ~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg 314 (410)
T 1vyh_C 236 WVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG 314 (410)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEE
T ss_pred cEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEE
Confidence 999999999 8999999999999999999999888888899999999999996 6689999
Q ss_pred ecCCCcEEEECCCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 141 RRRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 141 ~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+.|+.|++||+++++++..+ .|...+.+ ++|+| ++.+|++|+.|+.|++||+.+++..
T Consensus 315 s~D~~i~iwd~~~~~~~~~~~~h~~~v~~-----v~~~~-~g~~l~s~s~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 315 SRDKTIKMWDVSTGMCLMTLVGHDNWVRG-----VLFHS-GGKFILSCADDKTLRVWDYKNKRCM 373 (410)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEE-----EEECS-SSSCEEEEETTTEEEEECCTTSCCC
T ss_pred eCCCeEEEEECCCCceEEEEECCCCcEEE-----EEEcC-CCCEEEEEeCCCeEEEEECCCCceE
Confidence 99999999999999988888 57776655 56666 7999999999999999999988764
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.8e-38 Score=235.67 Aligned_cols=159 Identities=11% Similarity=0.121 Sum_probs=142.9
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+...++++|++|+.|++|++||+.+++.+..+ +|...|.+++|+|++ .+|++|+.|++|++||++ ++.+..+.+|..
T Consensus 72 ~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~ 149 (319)
T 3frx_A 72 TLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIK-GQCLATLLGHND 149 (319)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETT-SCEEEEECCCSS
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECC-CCeEEEEeccCC
Confidence 45677899999999999999999999988777 899999999999998 899999999999999997 456778889999
Q ss_pred CeEEEEEcCC-----CCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCC
Q psy11351 81 PFHAVMFNPV-----EARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSS 155 (224)
Q Consensus 81 ~i~~~~~~~~-----~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~ 155 (224)
.|.+++|.|. ++..+++++.|+.|++||+++.+....+.+|...|.+++|+|++++|++++.|+.|++||+++++
T Consensus 150 ~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 150 WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp CEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999983 23489999999999999999988888888999999999999999999999999999999999887
Q ss_pred cceeccc
Q psy11351 156 PVAQFDH 162 (224)
Q Consensus 156 ~~~~~~~ 162 (224)
.+..+.+
T Consensus 230 ~~~~~~~ 236 (319)
T 3frx_A 230 AMYTLSA 236 (319)
T ss_dssp EEEEEEC
T ss_pred EEEEecC
Confidence 7666543
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.9e-37 Score=231.30 Aligned_cols=195 Identities=14% Similarity=0.204 Sum_probs=176.9
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+.++.+++|++++.||.|++|++.+++....+ +|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+.+|..
T Consensus 30 ~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~ 108 (312)
T 4ery_A 30 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSN 108 (312)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCC-CEEEEECCCCEEEEEECCCCcEEEEEcCCCC
Confidence 45677899999999999999999999888777 899999999999998 8999999999999999999999999999999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 160 (224)
.|.+++|+| ++.++++++.|+.|++||+++++....+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+
T Consensus 109 ~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 187 (312)
T 4ery_A 109 YVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 187 (312)
T ss_dssp CEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEE
Confidence 999999999 8999999999999999999999888888889999999999999999999999999999999998877766
Q ss_pred c--cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 161 D--HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 161 ~--~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
. +... +..++|+| ++++|++++.|+.|++||+.+++..
T Consensus 188 ~~~~~~~-----~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 188 IDDDNPP-----VSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp CCSSCCC-----EEEEEECT-TSSEEEEEETTTEEEEEETTTTEEE
T ss_pred eccCCCc-----eEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEE
Confidence 2 2233 33467888 7999999999999999999988764
No 12
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.8e-37 Score=232.48 Aligned_cols=197 Identities=15% Similarity=0.211 Sum_probs=174.2
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCc----eeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGD----PIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA 76 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 76 (224)
+..+.++++++|+.|+.|++|++.+.+ ....+ +|.+.|.++.|++++ .+++++.|++|++||+++++.+..+.
T Consensus 104 ~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~ 181 (340)
T 1got_B 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFT 181 (340)
T ss_dssp EECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEc
Confidence 356678899999999999999998764 22333 899999999999876 58899999999999999999999999
Q ss_pred cCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCc
Q psy11351 77 VNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSP 156 (224)
Q Consensus 77 ~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~ 156 (224)
+|...|.+++|+| ++.++++|+.|+.|++||+++++....+..|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus 182 ~h~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 182 GHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 9999999999999 889999999999999999999988888889999999999999999999999999999999999888
Q ss_pred ceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 157 VAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+..+.+...... +..++|+| ++.+|++|+.|+.|++||+.+++..
T Consensus 261 ~~~~~~~~~~~~--v~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 261 LMTYSHDNIICG--ITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp EEEECCTTCCSC--EEEEEECT-TSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEccCCcccc--eEEEEECC-CCCEEEEECCCCeEEEEEcccCcEe
Confidence 777755443222 44588888 7999999999999999999988765
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.6e-36 Score=231.29 Aligned_cols=199 Identities=16% Similarity=0.198 Sum_probs=169.0
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceee------------------------------------------------EE
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPID------------------------------------------------FY 33 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~------------------------------------------------~~ 33 (224)
+..+++++|++|+.||+|++||..+++... .+
T Consensus 71 ~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~ 150 (354)
T 2pbi_B 71 DWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSV 150 (354)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEE
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceee
Confidence 445667788888888888888876554321 12
Q ss_pred -eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEEEEcCC-CCCeEEEecCCCcEEEEecCC
Q psy11351 34 -LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPV-EARLVATANSKDGIALYDTRK 111 (224)
Q Consensus 34 -~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~i~d~~~ 111 (224)
+|...|.+++|+|++ ..|++++.|++|++||+++++.+..+.+|...|.+++|+|. ++.+|++|+.||.|++||+++
T Consensus 151 ~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~ 229 (354)
T 2pbi_B 151 AMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 229 (354)
T ss_dssp EECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT
T ss_pred eccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 588889999999998 79999999999999999999999999999999999999884 358999999999999999999
Q ss_pred CceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCC
Q psy11351 112 PKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDF 191 (224)
Q Consensus 112 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 191 (224)
++....+..|...|.+++|+|++++|++++.|++|++||+++++.+..+....... ....++|+| ++.+|++|+.|+
T Consensus 230 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~--~~~~~~~s~-~g~~l~~g~~d~ 306 (354)
T 2pbi_B 230 GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIF--GASSVDFSL-SGRLLFAGYNDY 306 (354)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCS--CEEEEEECT-TSSEEEEEETTS
T ss_pred CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCccc--ceeEEEEeC-CCCEEEEEECCC
Confidence 98888888999999999999999999999999999999999887776664332222 244578888 799999999999
Q ss_pred eEEEEeCCCCCeE
Q psy11351 192 VLYMWRVPRDDIY 204 (224)
Q Consensus 192 ~v~iw~~~~~~~~ 204 (224)
.|++||+.+++..
T Consensus 307 ~i~vwd~~~~~~~ 319 (354)
T 2pbi_B 307 TINVWDVLKGSRV 319 (354)
T ss_dssp CEEEEETTTCSEE
T ss_pred cEEEEECCCCceE
Confidence 9999999988765
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.8e-37 Score=233.52 Aligned_cols=194 Identities=20% Similarity=0.258 Sum_probs=173.0
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc----cceeec
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE----EATELA 76 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----~~~~~~ 76 (224)
+.++++++|++|+.||+|++||+.+++.+..+ .|...|.+++|+|++ ++|++|+.|+.+++||+.+++ ....+.
T Consensus 62 ~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~ 140 (340)
T 1got_B 62 HWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLKTREGNVRVSRELA 140 (340)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTCSBSCEEEEEEE
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCC-CEEEEEeCCCeEEEEECccCCCcceeEEEec
Confidence 45677899999999999999999999888777 799999999999998 899999999999999998753 345677
Q ss_pred cCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCc
Q psy11351 77 VNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSP 156 (224)
Q Consensus 77 ~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~ 156 (224)
+|...|.++.|++ ++ .+++++.|+.|++||+++++....+.+|...|.+++|+|+++++++++.|+.|++||+++++.
T Consensus 141 ~h~~~v~~~~~~~-~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~ 218 (340)
T 1got_B 141 GHTGYLSCCRFLD-DN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC 218 (340)
T ss_dssp CCSSCEEEEEEEE-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE
T ss_pred CCCccEEEEEECC-CC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCee
Confidence 8999999999998 54 488999999999999999988888889999999999999999999999999999999999988
Q ss_pred ceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 157 VAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 157 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
...+ .|...+.+ ++|+| ++++|++|+.|+.|++||+++++..
T Consensus 219 ~~~~~~h~~~v~~-----v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 219 RQTFTGHESDINA-----ICFFP-NGNAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp EEEECCCSSCEEE-----EEECT-TSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEcCCcCCEEE-----EEEcC-CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 8888 56666554 66777 7999999999999999999988764
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.2e-37 Score=230.85 Aligned_cols=189 Identities=14% Similarity=0.198 Sum_probs=167.4
Q ss_pred ceEEEEEeCCCcEEEEeCCCC-----ceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 7 IKVLRVIGNDDHVISHDMASG-----DPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~-----~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+++|++|+.|++|++|++... .++..+ +|...|.+++|+|++ ++|++|+.|++|++||+++++.+..+.+|..
T Consensus 30 ~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~ 108 (319)
T 3frx_A 30 PNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG-AYALSASWDKTLRLWDVATGETYQRFVGHKS 108 (319)
T ss_dssp TTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred ccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC-CEEEEEeCCCEEEEEECCCCCeeEEEccCCC
Confidence 479999999999999998643 234444 899999999999998 8999999999999999999999999999999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCC------CCeEeeeecCCCcEEEECCCC
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKA------GTQLLGLRRRLPPVLYNTRSS 154 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d~~v~v~d~~~~ 154 (224)
.|.+++|+| ++.++++|+.|+.|++||++. +.+..+.+|...|.++.|+|. +..+++++.|+.|++||+++.
T Consensus 109 ~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 186 (319)
T 3frx_A 109 DVMSVDIDK-KASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF 186 (319)
T ss_dssp CEEEEEECT-TSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT
T ss_pred cEEEEEEcC-CCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc
Confidence 999999999 899999999999999999974 467778889999999999985 448999999999999999998
Q ss_pred Ccceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 155 SPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+....+ .|...+.+ ++|+| ++.+|++|+.|+.|++||+.+++..
T Consensus 187 ~~~~~~~~h~~~v~~-----~~~sp-~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 187 QIEADFIGHNSNINT-----LTASP-DGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp EEEEEECCCCSCEEE-----EEECT-TSSEEEEEETTCEEEEEETTTTEEE
T ss_pred hhheeecCCCCcEEE-----EEEcC-CCCEEEEEeCCCeEEEEECCCCcEE
Confidence 877777 57766654 66777 7999999999999999999998764
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.1e-36 Score=225.74 Aligned_cols=198 Identities=19% Similarity=0.311 Sum_probs=174.5
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+..+.+++|++++.|+.|++||+++++++..+ +|...|.+++|+|++ ++|++|+.|+.|++||+++++.+..+..|..
T Consensus 72 ~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 150 (312)
T 4ery_A 72 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 150 (312)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEEEEecCCCC
Confidence 45667899999999999999999999988777 899999999999998 8999999999999999999999999999999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee-cCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCccee
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY-GSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQ 159 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~ 159 (224)
+|.+++|+| ++.++++++.||.|++||+++++....+. .+...+..++|+|++++|++++.|+.|++||+++++.+..
T Consensus 151 ~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 229 (312)
T 4ery_A 151 PVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT 229 (312)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE
T ss_pred cEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 999999999 88999999999999999999987766654 4667899999999999999999999999999999988887
Q ss_pred c-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 160 F-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 160 ~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+ .|......+. ..+++.++.+|++|+.||.|++||+.+++..
T Consensus 230 ~~~~~~~~~~~~---~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 230 YTGHKNEKYCIF---ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp ECSSCCSSSCCC---EEEECSSSCEEEECCTTSCEEEEETTTCCEE
T ss_pred EEecCCceEEEE---EEEEeCCCcEEEEECCCCEEEEEECCCchhh
Confidence 7 4544433322 3455447899999999999999999998775
No 17
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.8e-37 Score=232.44 Aligned_cols=188 Identities=20% Similarity=0.275 Sum_probs=166.5
Q ss_pred CCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCC-CcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQ-DAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
..+.++.|++++.|++|++||+++++++..+ +|...|.+++|+|+. .++|++|+.|++|++||+++++++..+..|..
T Consensus 162 ~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~ 241 (354)
T 2pbi_B 162 FTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES 241 (354)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC
Confidence 3456778999999999999999999998877 899999999998852 27999999999999999999999999999999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec--CCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcce
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG--SCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVA 158 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~ 158 (224)
.|.+++|+| ++.+|++++.|+.|++||++..+....+.. +...+.+++|+|++++|++++.|+.|++||+.+++.+.
T Consensus 242 ~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 320 (354)
T 2pbi_B 242 DVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS 320 (354)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred CeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE
Confidence 999999999 889999999999999999998866555543 33578999999999999999999999999999998887
Q ss_pred ec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEe
Q psy11351 159 QF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWR 197 (224)
Q Consensus 159 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~ 197 (224)
.+ .|.+.+.+ ++|+| ++.+|++|+.|+.|++|+
T Consensus 321 ~l~~h~~~v~~-----l~~sp-dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 321 ILFGHENRVST-----LRVSP-DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECCCSSCEEE-----EEECT-TSSCEEEEETTSEEEEEC
T ss_pred EEECCCCcEEE-----EEECC-CCCEEEEEcCCCCEEecC
Confidence 77 57776655 66777 799999999999999996
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3e-36 Score=232.81 Aligned_cols=195 Identities=19% Similarity=0.282 Sum_probs=165.3
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+.++++++|++|+.|++|++||+.+++.+..+ +|...|++++|+|++ ++|++++.|++|++||+++++....+. +..
T Consensus 130 ~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~ 207 (393)
T 1erj_A 130 CFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSLTLS-IED 207 (393)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEE-CSS
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeEEEEE-cCC
Confidence 34667899999999999999999999888777 899999999999998 899999999999999999998776665 456
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEe-------ecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCC
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQ-------YGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~ 153 (224)
.+.+++|+|.++.++++|+.|+.|++||+++++....+ .+|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 208 ~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 208 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 79999999977899999999999999999988766555 46889999999999999999999999999999976
Q ss_pred CCc------------ceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 154 SSP------------VAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 154 ~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
... ...+ .|...+. .++|+| ++.+|++|+.|+.|++||+.+++..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~h~~~v~-----~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 288 ANNKSDSKTPNSGTCEVTYIGHKDFVL-----SVATTQ-NDEYILSGSKDRGVLFWDKKSGNPL 345 (393)
T ss_dssp -------------CEEEEEECCSSCEE-----EEEECG-GGCEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCcccccCCCCCcceEEEecccCcEE-----EEEECC-CCCEEEEEeCCCeEEEEECCCCeEE
Confidence 432 2222 3554444 466777 7899999999999999999998775
No 19
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-36 Score=232.00 Aligned_cols=194 Identities=16% Similarity=0.146 Sum_probs=159.3
Q ss_pred CCcceEEEEEeCCCcEEEEeCCCCceee-----EEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccC
Q psy11351 4 GDPIKVLRVIGNDDHVISHDMASGDPID-----FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVN 78 (224)
Q Consensus 4 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 78 (224)
.++++ +++++.||+|+|||+.+++... ..+|...|++++|+|++ ++|++|+.|++|++||+++++.+..+..|
T Consensus 103 s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~~~~~~~h 180 (357)
T 4g56_B 103 VSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAVLKSYNAH 180 (357)
T ss_dssp ETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred cCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCC
Confidence 44454 5677889999999998876542 22799999999999998 89999999999999999999999999999
Q ss_pred CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee--cCCCceeEEEEcCC-CCeEeeeecCCCcEEEECCCCC
Q psy11351 79 SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY--GSCESCMSIRFNKA-GTQLLGLRRRLPPVLYNTRSSS 155 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~d~~v~v~d~~~~~ 155 (224)
...|.+++|+|++..++++++.|+.|++||+++++....+. .+...+.+++|+|+ +.+|++++.|+.|++||+++++
T Consensus 181 ~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 181 SSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp SSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG
T ss_pred CCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCc
Confidence 99999999999555789999999999999999887655443 46778999999998 4678889999999999999999
Q ss_pred cceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 156 PVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 156 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
++..+ .|...+.+ ++|+|.++++|++|+.|+.|+|||+++++..
T Consensus 261 ~~~~~~~~~~~v~~-----l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 261 SAQTSAVHSQNITG-----LAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp GCEEECCCSSCEEE-----EEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred EeEEEeccceeEEE-----EEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 88888 46665544 7778855578999999999999999998765
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.2e-37 Score=232.41 Aligned_cols=191 Identities=19% Similarity=0.235 Sum_probs=163.2
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCCceee--EE--eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc--ccee
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASGDPID--FY--LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE--EATE 74 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~ 74 (224)
++.++++++|++|+.|++|+|||+++++... .. +|...|.+++|+|++ ++|++|+.|+++++||++.+. .+..
T Consensus 22 l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v~iw~~~~~~~~~~~~ 100 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG-NYLASASFDATTCIWKKNQDDFECVTT 100 (345)
T ss_dssp EEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECCC-EEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC-CEEEEEECCCcEEEEEccCCCeEEEEE
Confidence 3567788999999999999999998876432 22 799999999999998 899999999999999998764 5678
Q ss_pred eccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCce---eeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEEC
Q psy11351 75 LAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKE---VLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNT 151 (224)
Q Consensus 75 ~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~ 151 (224)
+.+|...|.+++|+| ++++|++++.|+.|++||+++... ...+..|...|.+++|+|++++|++++.|+.|++||.
T Consensus 101 ~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~ 179 (345)
T 3fm0_A 101 LEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYRE 179 (345)
T ss_dssp ECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEE
T ss_pred ccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEe
Confidence 889999999999999 899999999999999999987643 3445679999999999999999999999999999999
Q ss_pred CCCCcc--eec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCC
Q psy11351 152 RSSSPV--AQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 152 ~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~ 199 (224)
++++.. ..+ .|...+.+ ++|+| ++++|++++.|+.|++|+..
T Consensus 180 ~~~~~~~~~~~~~h~~~v~~-----l~~sp-~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 180 EEDDWVCCATLEGHESTVWS-----LAFDP-SGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp ETTEEEEEEEECCCSSCEEE-----EEECT-TSSEEEEEETTSCEEEEEEE
T ss_pred cCCCEEEEEEecCCCCceEE-----EEECC-CCCEEEEEeCCCeEEEeccc
Confidence 877533 344 46665554 67777 79999999999999999963
No 21
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.4e-36 Score=226.35 Aligned_cols=186 Identities=17% Similarity=0.226 Sum_probs=158.9
Q ss_pred cceEEEEEeCCCcEEEEeCCCCc-------eeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeecc
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGD-------PIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAV 77 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 77 (224)
++++|++|+.|++|++||+.+.+ +...+ +|...|++++|+|++ .++++|+.|++|++||+++++.+..+.+
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~~~~~~~~~~ 116 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN-CFAISSSWDKTLRLWDLRTGTTYKRFVG 116 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST-TEEEEEETTSEEEEEETTSSCEEEEEEC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCcEEEEEcC
Confidence 67899999999999999997543 33444 899999999999998 8999999999999999999999999999
Q ss_pred CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee---cCCCceeEEEEcCCC----------CeEeeeecCC
Q psy11351 78 NSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY---GSCESCMSIRFNKAG----------TQLLGLRRRL 144 (224)
Q Consensus 78 ~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~~~~~d~ 144 (224)
|...|.+++|+| ++++|++++.|+.|++||++.. ...... .|...|.+++|+|++ .++++++.|+
T Consensus 117 h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 194 (343)
T 2xzm_R 117 HQSEVYSVAFSP-DNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG 194 (343)
T ss_dssp CCSCEEEEEECS-STTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS
T ss_pred CCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC
Confidence 999999999999 8899999999999999999843 333333 588899999999987 7899999999
Q ss_pred CcEEEECCCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCC
Q psy11351 145 PPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 145 ~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 201 (224)
.|++||. +.+....+ .|...+.+ ++|+| ++++|++|+.|+.|++||+.+.
T Consensus 195 ~i~iwd~-~~~~~~~~~~h~~~v~~-----~~~s~-~g~~l~sgs~dg~v~iwd~~~~ 245 (343)
T 2xzm_R 195 RLKVWNT-NFQIRYTFKAHESNVNH-----LSISP-NGKYIATGGKDKKLLIWDILNL 245 (343)
T ss_dssp EEEEEET-TTEEEEEEECCSSCEEE-----EEECT-TSSEEEEEETTCEEEEEESSCC
T ss_pred EEEEEcC-CCceeEEEcCccccceE-----EEECC-CCCEEEEEcCCCeEEEEECCCC
Confidence 9999994 34444555 56666554 66777 7999999999999999999544
No 22
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.8e-36 Score=223.01 Aligned_cols=194 Identities=16% Similarity=0.242 Sum_probs=162.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCC--ceeeEE-eccCCeeEEEEcCC--CCcEEEEecCCCEEEEEecCCcc--ccee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASG--DPIDFY-LHERPVYGLSVDPS--QDAIFASACDDGRVLLFDTRSRE--EATE 74 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~-~~~~~v~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~--~~~~ 74 (224)
+++..+++|++|+.|++|+|||++.+ +++..+ +|.++|++++|+|. + ++|++|+.|++|++||+++++ .+..
T Consensus 16 ~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D~~v~iWd~~~~~~~~~~~ 94 (297)
T 2pm7_B 16 VMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVMIWKEENGRWSQIAV 94 (297)
T ss_dssp EECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTTEEEEEEBSSSCBCCCEE
T ss_pred EECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcC-CEEEEEcCCCEEEEEEcCCCceEEEEE
Confidence 56678999999999999999999753 555555 89999999999864 5 799999999999999998874 4566
Q ss_pred eccCCcCeEEEEEcCCC--CCeEEEecCCCcEEEEecCCCce--eeEeecCCCceeEEEEcCC-------------CCeE
Q psy11351 75 LAVNSGPFHAVMFNPVE--ARLVATANSKDGIALYDTRKPKE--VLMQYGSCESCMSIRFNKA-------------GTQL 137 (224)
Q Consensus 75 ~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~-------------~~~l 137 (224)
+..|...|.+++|+| + +.+|++++.|+.|++||+++... ...+..|...|.+++|+|+ +++|
T Consensus 95 ~~~h~~~v~~v~~~p-~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l 173 (297)
T 2pm7_B 95 HAVHSASVNSVQWAP-HEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (297)
T ss_dssp ECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEE
T ss_pred eecCCCceeEEEeCc-CCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceE
Confidence 778999999999999 5 78999999999999999987632 3456689999999999997 5799
Q ss_pred eeeecCCCcEEEECCCCC----cceec-ccCCcccceeeeEEEEeCCC--CeEEEEcCCCCeEEEEeCCCCC
Q psy11351 138 LGLRRRLPPVLYNTRSSS----PVAQF-DHEGYYNSCTMKSCCFAGTQ--DEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 138 ~~~~~d~~v~v~d~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
++++.|+.|++||+++++ ....+ .|...+.+ ++|+|.. +.+|++++.|+.|++||+++++
T Consensus 174 ~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~-----v~~sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD-----VAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE-----EEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred EEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEE-----EEECCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 999999999999998766 33444 46666554 6777732 5899999999999999998753
No 23
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-35 Score=228.57 Aligned_cols=190 Identities=20% Similarity=0.281 Sum_probs=164.1
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEE------eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecC-CcccceeeccCC
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFY------LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTR-SREEATELAVNS 79 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~ 79 (224)
+..|++|+.|++|++||+.+++.+..+ +|...|.+++|+|.++++|++|+.|++|++||++ .++.+..+.+|.
T Consensus 170 ~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~ 249 (380)
T 3iz6_a 170 ETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE 249 (380)
T ss_dssp SSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS
T ss_pred CCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC
Confidence 457999999999999999999887665 5889999999988444899999999999999998 456788889999
Q ss_pred cCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecC-------CCceeEEEEcCCCCeEeeeecCCCcEEEECC
Q psy11351 80 GPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGS-------CESCMSIRFNKAGTQLLGLRRRLPPVLYNTR 152 (224)
Q Consensus 80 ~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~ 152 (224)
..|.+++|+| ++.+|++|+.||.|++||+++++.+..+..+ ...+++++|+|+|++|++++.|+.|++||+.
T Consensus 250 ~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 250 GDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp SCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred CCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 9999999999 8999999999999999999998776665432 2348999999999999999999999999999
Q ss_pred CCCcceec-----ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 153 SSSPVAQF-----DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 153 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
+++.+..+ .|.+.+.+ ++|+| ++.+|++|+.|+.|++|++...+.
T Consensus 329 ~~~~~~~~~~~~~~h~~~v~~-----l~~s~-dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 329 LAEMVLNLGTLQNSHEGRISC-----LGLSS-DGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp TCCEEEEECCSCSSCCCCCCE-----EEECS-SSSEEEEECTTSCEEEEECCSSSS
T ss_pred CCceEEEEecccCCCCCceEE-----EEECC-CCCEEEEeeCCCCEEEEecCCCcc
Confidence 88877665 35555555 66677 799999999999999999987643
No 24
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.5e-35 Score=236.55 Aligned_cols=153 Identities=14% Similarity=0.228 Sum_probs=134.9
Q ss_pred CCcce-EEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec-----
Q psy11351 4 GDPIK-VLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA----- 76 (224)
Q Consensus 4 ~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----- 76 (224)
.+.+. .|++|+.|++|++||..++++...+ +|...|++++|+|++ ++|++|+.|++|++||+.+++....+.
T Consensus 156 ~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~ 234 (611)
T 1nr0_A 156 KPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 234 (611)
T ss_dssp CSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEECBCTTSS
T ss_pred CCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEeeeecccccc
Confidence 34444 6999999999999999988888777 899999999999998 899999999999999999988777773
Q ss_pred --cCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeE-------------------------------------
Q psy11351 77 --VNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLM------------------------------------- 117 (224)
Q Consensus 77 --~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~------------------------------------- 117 (224)
+|.+.|.+++|+| ++++|++++.|+.|++||+++++....
T Consensus 235 ~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~ 313 (611)
T 1nr0_A 235 NVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPEL 313 (611)
T ss_dssp SCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTT
T ss_pred ccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCC
Confidence 7999999999999 899999999999999999987654322
Q ss_pred ------eecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcce
Q psy11351 118 ------QYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVA 158 (224)
Q Consensus 118 ------~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~ 158 (224)
+.+|...|++++|+|+|++|++++.|+.|++||+.+++...
T Consensus 314 ~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 314 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNR 360 (611)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceee
Confidence 23688899999999999999999999999999998765443
No 25
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-35 Score=223.31 Aligned_cols=148 Identities=18% Similarity=0.227 Sum_probs=131.0
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCc--eeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc---cceee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGD--PIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE---EATEL 75 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~ 75 (224)
+.++.+++|++|+.|+++++||+..++ ++..+ +|...|.+++|+|++ ++|++|+.|++|++||+++++ .+..+
T Consensus 68 ~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 68 AWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp EECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred EECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 456778999999999999999998774 34445 899999999999998 899999999999999998764 35667
Q ss_pred ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCce--eeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEEC
Q psy11351 76 AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKE--VLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNT 151 (224)
Q Consensus 76 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~ 151 (224)
..|...|.+++|+| ++.+|++++.|+.|++||+++++. ...+.+|...|.+++|+|++++|++++.|++|++||.
T Consensus 147 ~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 147 NSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp CCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred cCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 88999999999999 889999999999999999987753 3556789999999999999999999999999999996
No 26
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.9e-36 Score=230.64 Aligned_cols=196 Identities=17% Similarity=0.199 Sum_probs=170.7
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc-------cce
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE-------EAT 73 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-------~~~ 73 (224)
+.++.+++|++|+.||+|+|||+.+++....+ .|...|.+++|+|++ ++|++|+.|+.+++||+.+.. ...
T Consensus 73 ~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g-~~las~~~d~~v~iw~~~~~~~~~~~~~~~~ 151 (380)
T 3iz6_a 73 DWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNG-QSVACGGLDSACSIFNLSSQADRDGNMPVSR 151 (380)
T ss_dssp EECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTS-SEEEECCSSSCCEEEECCCCSSCCCSSTTCC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCC-CEEEEeeCCCcEEEEECCCCccccCCcccee
Confidence 45677889999999999999999999888777 899999999999998 899999999999999987532 345
Q ss_pred eeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEe-----ecCCCceeEEEEcC-CCCeEeeeecCCCcE
Q psy11351 74 ELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQ-----YGSCESCMSIRFNK-AGTQLLGLRRRLPPV 147 (224)
Q Consensus 74 ~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~ 147 (224)
.+.+|.+.+.++.|.|.++..+++|+.|+.|++||+++++....+ .+|...|.+++|++ +++++++++.|+.|+
T Consensus 152 ~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~ 231 (380)
T 3iz6_a 152 VLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVR 231 (380)
T ss_dssp BCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEE
T ss_pred eccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEE
Confidence 678999999999999966778999999999999999998877665 46889999999987 789999999999999
Q ss_pred EEECC-CCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 148 LYNTR-SSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 148 v~d~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+||++ .++.+..+ .|.+.+++ ++|+| ++.+|++|+.|+.|++||+++++..
T Consensus 232 ~wd~~~~~~~~~~~~~h~~~v~~-----v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 232 LWDLRITSRAVRTYHGHEGDINS-----VKFFP-DGQRFGTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp EEETTTTCCCCEEECCCSSCCCE-----EEECT-TSSEEEEECSSSCEEEEETTTTEEE
T ss_pred EEECCCCCcceEEECCcCCCeEE-----EEEec-CCCeEEEEcCCCeEEEEECCCCcEE
Confidence 99998 44666666 68777776 56666 7999999999999999999998764
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-35 Score=229.23 Aligned_cols=197 Identities=15% Similarity=0.187 Sum_probs=167.4
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcC-CCCcEEEEecCCCEEEEEecCCcccceee-----
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDP-SQDAIFASACDDGRVLLFDTRSREEATEL----- 75 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~----- 75 (224)
+..+.+++|++++.|++|++||+.++++...+.+...+.+++|+| ++ ++|++|+.|+.|++||+++++.+..+
T Consensus 172 ~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~ 250 (393)
T 1erj_A 172 DYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG-KYIAAGSLDRAVRVWDSETGFLVERLDSENE 250 (393)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTC-CEEEEEETTSCEEEEETTTCCEEEEEC----
T ss_pred EEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCC-CEEEEEcCCCcEEEEECCCCcEEEeeccccc
Confidence 345678899999999999999999999888888889999999999 55 89999999999999999988876655
Q ss_pred --ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCc------------eeeEeecCCCceeEEEEcCCCCeEeeee
Q psy11351 76 --AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPK------------EVLMQYGSCESCMSIRFNKAGTQLLGLR 141 (224)
Q Consensus 76 --~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 141 (224)
.+|...|.+++|+| ++.+|++++.|+.|++||+++.. ....+.+|...|.+++|+|++.+|++++
T Consensus 251 ~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs 329 (393)
T 1erj_A 251 SGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS 329 (393)
T ss_dssp --CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE
T ss_pred CCCCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe
Confidence 57889999999999 89999999999999999997632 3345667999999999999999999999
Q ss_pred cCCCcEEEECCCCCcceec-ccCCcccceeeeE-EEEeCCCCeEEEEcCCCCeEEEEeCCCC
Q psy11351 142 RRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKS-CCFAGTQDEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 142 ~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 201 (224)
.|+.|++||+++++++..+ .|.+.+.++.+.+ ..|+| ++++|++|+.||.|++|++...
T Consensus 330 ~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p-~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 330 KDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGP-EYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCT-TCEEEEEEETTSEEEEEEEEEC
T ss_pred CCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCC-CCCEEEEECCCCcEEECccccc
Confidence 9999999999999988888 6777776654432 12334 5899999999999999998654
No 28
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3e-35 Score=238.86 Aligned_cols=194 Identities=18% Similarity=0.209 Sum_probs=165.8
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCce--eeEE-eccCCeeEEEEcCCCCcEEEEecCC----CEEEEEecCCccccee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDP--IDFY-LHERPVYGLSVDPSQDAIFASACDD----GRVLLFDTRSREEATE 74 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d----~~i~iwd~~~~~~~~~ 74 (224)
+++++|++||+|+.|++|+|||+.+++. ...+ +|.++|.+++|+|++ +.|++++.+ +.|++|| .++....
T Consensus 66 ~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg-~~l~~~~~~~~~~~~v~~wd--~~~~~~~ 142 (611)
T 1nr0_A 66 KTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES-KRIAAVGEGRERFGHVFLFD--TGTSNGN 142 (611)
T ss_dssp EECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTS-CEEEEEECCSSCSEEEEETT--TCCBCBC
T ss_pred EECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCC-CEEEEEECCCCceeEEEEee--CCCCcce
Confidence 5678899999999999999999976543 3333 799999999999999 788887765 4788887 4566778
Q ss_pred eccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCC
Q psy11351 75 LAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSS 154 (224)
Q Consensus 75 ~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~ 154 (224)
+.+|...|.+++|+|++...|++++.|+.|++||.++.+....+.+|...|.+++|+|+|++|++++.|++|++||+.++
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 89999999999999943447999999999999999988777888899999999999999999999999999999999998
Q ss_pred Ccceec--------ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 155 SPVAQF--------DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 155 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+.+..+ .|.+.+. .++|+| ++++|++++.|+.|++||+.+++..
T Consensus 223 ~~~~~~~~~~~~~~~h~~~V~-----~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 223 TKTGVFEDDSLKNVAHSGSVF-----GLTWSP-DGTKIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp CEEEECBCTTSSSCSSSSCEE-----EEEECT-TSSEEEEEETTSEEEEEETTTTEEE
T ss_pred cEeeeeccccccccccCCCEE-----EEEECC-CCCEEEEEeCCCeEEEEeCCCCcee
Confidence 877666 3555444 477777 7999999999999999999988764
No 29
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.1e-35 Score=225.90 Aligned_cols=191 Identities=10% Similarity=0.004 Sum_probs=159.8
Q ss_pred CCCCcceEEEEE--eCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccce--eecc
Q psy11351 2 ASGDPIKVLRVI--GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT--ELAV 77 (224)
Q Consensus 2 a~~~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~--~~~~ 77 (224)
+++++|++++++ +.|++|+|||+++++++..+.|...|++++|+|++ +++++++.+ .+.+|+..+++.+. ....
T Consensus 140 ~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg-~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~ 217 (365)
T 4h5i_A 140 YISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDG-KVVAYITGS-SLEVISTVTGSCIARKTDFD 217 (365)
T ss_dssp EECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTS-SEEEEECSS-CEEEEETTTCCEEEEECCCC
T ss_pred EEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCC-ceEEeccce-eEEEEEeccCcceeeeecCC
Confidence 456778877654 47899999999999999888999999999999999 899999855 56667666666443 3456
Q ss_pred CCcCeEEEEEcCCCCCeEEEecCCC----cEEEEecCCCce----eeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEE
Q psy11351 78 NSGPFHAVMFNPVEARLVATANSKD----GIALYDTRKPKE----VLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLY 149 (224)
Q Consensus 78 ~~~~i~~~~~~~~~~~~l~~~~~dg----~v~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~ 149 (224)
|...|.+++|+| ++.++++++.++ .+++||+..... ...+..|...|++++|+|+|++|++|+.|++|+||
T Consensus 218 ~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw 296 (365)
T 4h5i_A 218 KNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALV 296 (365)
T ss_dssp TTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEE
Confidence 888999999999 889999988777 588899876643 23455789999999999999999999999999999
Q ss_pred ECCCCCcceec--ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCC
Q psy11351 150 NTRSSSPVAQF--DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 150 d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 201 (224)
|+++++++..+ .|...|++ ++|+| ++++|++|+.|++|+|||++..
T Consensus 297 d~~~~~~~~~~~~gH~~~V~~-----v~fSp-dg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 297 KLKDLSMSKIFKQAHSFAITE-----VTISP-DSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ETTTTEEEEEETTSSSSCEEE-----EEECT-TSCEEEEEETTSEEEEEECCTT
T ss_pred ECCCCcEEEEecCcccCCEEE-----EEECC-CCCEEEEEeCCCeEEEEEcCCC
Confidence 99999998875 47777665 66777 7999999999999999999764
No 30
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.9e-35 Score=227.82 Aligned_cols=193 Identities=13% Similarity=0.142 Sum_probs=168.5
Q ss_pred CCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcC
Q psy11351 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP 81 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 81 (224)
...++++|++|+.||.|++||+.+++....+ +|...|++++|+|++ ++|++|+.|+.|++||+++++.+..+.+|...
T Consensus 105 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~ 183 (420)
T 3vl1_A 105 AKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGSNPRTLIGHRAT 183 (420)
T ss_dssp ECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCCCEEEECCSSC
T ss_pred EecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCc
Confidence 3567889999999999999999999888876 899999999999998 89999999999999999999999999999999
Q ss_pred eEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec---CC---------------------CceeEEEEcCCCCeE
Q psy11351 82 FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG---SC---------------------ESCMSIRFNKAGTQL 137 (224)
Q Consensus 82 i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~---~~---------------------~~v~~~~~~~~~~~l 137 (224)
|.+++|+| ++.+|++++.|+.|++||+++++....+.. +. ..+.+++|+|++++|
T Consensus 184 v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (420)
T 3vl1_A 184 VTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYV 262 (420)
T ss_dssp EEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEE
T ss_pred EEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEE
Confidence 99999999 899999999999999999999887776653 33 444555668899999
Q ss_pred eeeecCCCcEEEECCCCCcceecc--cCCcccceeeeEEEEeCCCCe-EEEEcCCCCeEEEEeCCCCCe
Q psy11351 138 LGLRRRLPPVLYNTRSSSPVAQFD--HEGYYNSCTMKSCCFAGTQDE-YVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 138 ~~~~~d~~v~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~v~iw~~~~~~~ 203 (224)
++++.|+.|++||+++++....+. |...+. .++|+| ++. +|++|+.||.|++||+++++.
T Consensus 263 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~-----~~~~~~-~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 263 IAGHVSGVITVHNVFSKEQTIQLPSKFTCSCN-----SLTVDG-NNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCTTSSCEE-----EEEECS-SCTTEEEEEETTSEEEEEETTCTTS
T ss_pred EEEcCCCeEEEEECCCCceeEEcccccCCCce-----eEEEeC-CCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 999999999999999988777762 444444 477777 566 999999999999999998765
No 31
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-35 Score=221.22 Aligned_cols=186 Identities=16% Similarity=0.235 Sum_probs=151.8
Q ss_pred EEEEEeCCCcEEEEeCCCCc--eeeEE--e-ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCC-------cccceeec
Q psy11351 9 VLRVIGNDDHVISHDMASGD--PIDFY--L-HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRS-------REEATELA 76 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-------~~~~~~~~ 76 (224)
+|++|+.|++|++||++.++ ....+ + |...|++++|+|++ ++|++|+.|++|++||++. .+.+..+.
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 104 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE 104 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS-SEEEEEETTSCEEEEEC-------CCCEEEEEEC
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCccccceeEEEEc
Confidence 89999999999999998753 34444 3 99999999999998 8999999999999999853 23456778
Q ss_pred cCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCC----ceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECC
Q psy11351 77 VNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKP----KEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTR 152 (224)
Q Consensus 77 ~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~ 152 (224)
+|...|.+++|+| ++++|++|+.|+.|++||++.. +....+.+|...|.+++|+|++++|++++.|++|++||..
T Consensus 105 ~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 105 GHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDY 183 (330)
T ss_dssp ----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEE
T ss_pred CCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 9999999999999 8999999999999999999532 3445567899999999999999999999999999999987
Q ss_pred CC--Ccceec-ccCCcccceeeeEEEEeCCC-CeEEEEcCCCCeEEEEeCCCC
Q psy11351 153 SS--SPVAQF-DHEGYYNSCTMKSCCFAGTQ-DEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 153 ~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~d~~v~iw~~~~~ 201 (224)
++ +++..+ .|.+.+.+ ++|+|.. +.+|++|+.|+.|++||+.++
T Consensus 184 ~~~~~~~~~~~~h~~~v~~-----~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 184 DDDWECVAVLNGHEGTVWS-----SDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp TTEEEEEEEECCCSSCEEE-----EEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred CCCeeEEEEccCCCCcEEE-----EEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 66 455566 57666654 5666632 568999999999999998654
No 32
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-35 Score=220.92 Aligned_cols=192 Identities=18% Similarity=0.174 Sum_probs=153.8
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCC-------CceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc----
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMAS-------GDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR---- 69 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---- 69 (224)
+.++.+++|++|+.|++|+|||+.. .+++..+ +|...|++++|+|++ ++|++|+.|++|++||++..
T Consensus 65 ~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~ 143 (330)
T 2hes_X 65 AWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEY 143 (330)
T ss_dssp EECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCC
T ss_pred EECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCe
Confidence 4566788999999999999999853 2344445 899999999999998 89999999999999999532
Q ss_pred ccceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCC--ceeeEeecCCCceeEEEEcCC--CCeEeeeecCCC
Q psy11351 70 EEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKP--KEVLMQYGSCESCMSIRFNKA--GTQLLGLRRRLP 145 (224)
Q Consensus 70 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~ 145 (224)
+++..+.+|...|.+++|+| ++.+|++++.|+.|++||.+++ +.+..+.+|...|.+++|+|+ +.+|++++.|++
T Consensus 144 ~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 144 ECISVLQEHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp EEEEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred EEEEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 35667889999999999999 8999999999999999999876 456667789999999999998 678999999999
Q ss_pred cEEEECCCCC--------cceec-c-cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 146 PVLYNTRSSS--------PVAQF-D-HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 146 v~v~d~~~~~--------~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
|++||++++. ....+ . |...+. .++|++ +.+|++++.||.|++||..+++
T Consensus 223 v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~-----~v~~s~--~~~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVY-----NVAWGF--NGLIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECCSCCSSCEE-----EEEECT--TSCEEEEETTSCEEEEEEETTE
T ss_pred EEEEEecCCCccccceeEEeeecccccccceE-----EEEEcC--CCEEEEEeCCCEEEEEEcCCCc
Confidence 9999987542 22222 1 444444 466765 3489999999999999998774
No 33
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.9e-36 Score=231.17 Aligned_cols=195 Identities=9% Similarity=0.083 Sum_probs=157.8
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCC--ceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc---ccee
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASG--DPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE---EATE 74 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~~ 74 (224)
++.++++++|++|+.|+.|++||+.++ +.+..+ +|...|++++|+|++ ++|++++.|++|++||+++++ ....
T Consensus 17 ~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~~~~~~~~~~~ 95 (377)
T 3dwl_C 17 HAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKRPDGTWKQTLV 95 (377)
T ss_dssp CEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC------CCCCEEE
T ss_pred EEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCceeeeeE
Confidence 356778899999999999999999988 555555 899999999999998 899999999999999999877 5667
Q ss_pred eccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCce---eeEeec-CCCceeEEEEcCCCCeEeeeecCCCcEEEE
Q psy11351 75 LAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKE---VLMQYG-SCESCMSIRFNKAGTQLLGLRRRLPPVLYN 150 (224)
Q Consensus 75 ~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~---~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d 150 (224)
+..|...|.+++|+| ++++|++++.|+.|++||+++++. ...+.. |...|.+++|+|++++|++++.|+.|++||
T Consensus 96 ~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 96 LLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLS 174 (377)
T ss_dssp CCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred ecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 788999999999999 889999999999999999998763 556666 999999999999999999999999999999
Q ss_pred CCCC------------------CcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 151 TRSS------------------SPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 151 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
++.. +++..+.|.+.+ ..++|+| ++++|++++.|+.|++||+.+++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----~~~~~sp-~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 175 AYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWV-----HAVGFSP-SGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp ECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSE-----EEEEECT-TSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEecccCCCccccccccccchhhhhhcccCCceE-----EEEEECC-CCCEEEEEeCCCcEEEEECCCCCC
Confidence 8632 233333344444 3477777 799999999999999999999876
No 34
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.4e-35 Score=221.45 Aligned_cols=194 Identities=16% Similarity=0.227 Sum_probs=158.3
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCce--eeEE-eccCCeeEEEEcCC--CCcEEEEecCCCEEEEEecCCcc--ccee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDP--IDFY-LHERPVYGLSVDPS--QDAIFASACDDGRVLLFDTRSRE--EATE 74 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~-~~~~~v~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~--~~~~ 74 (224)
+++..+++|++|+.|++|+|||+.+++. +..+ +|.+.|++++|+|. + ++|++|+.|++|++||+++++ ....
T Consensus 20 ~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~-~~l~s~s~D~~v~iWd~~~~~~~~~~~ 98 (316)
T 3bg1_A 20 QMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYG-NILASCSYDRKVIIWREENGTWEKSHE 98 (316)
T ss_dssp EECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGS-SCEEEEETTSCEEEECCSSSCCCEEEE
T ss_pred eEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCC-CEEEEEECCCEEEEEECCCCcceEEEE
Confidence 4567789999999999999999987753 3444 89999999999863 5 799999999999999999874 4566
Q ss_pred eccCCcCeEEEEEcCCC-CCeEEEecCCCcEEEEecCCCce---eeEeecCCCceeEEEEcCC-----------------
Q psy11351 75 LAVNSGPFHAVMFNPVE-ARLVATANSKDGIALYDTRKPKE---VLMQYGSCESCMSIRFNKA----------------- 133 (224)
Q Consensus 75 ~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~i~d~~~~~~---~~~~~~~~~~v~~~~~~~~----------------- 133 (224)
+.+|...|.+++|+|+. +.+|++|+.|+.|++||++.... ...+..|...+.+++|+|+
T Consensus 99 ~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (316)
T 3bg1_A 99 HAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNY 178 (316)
T ss_dssp ECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCC
T ss_pred ccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccc
Confidence 78899999999999932 78999999999999999987532 2333468889999999997
Q ss_pred CCeEeeeecCCCcEEEECCCCC---cceec-ccCCcccceeeeEEEEeCCC---CeEEEEcCCCCeEEEEeCCCC
Q psy11351 134 GTQLLGLRRRLPPVLYNTRSSS---PVAQF-DHEGYYNSCTMKSCCFAGTQ---DEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 134 ~~~l~~~~~d~~v~v~d~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~l~s~~~d~~v~iw~~~~~ 201 (224)
+++|++++.|+.|++||++... ++..+ .|...+.+ ++|+|.. +.+|++++.|+.|++|++.+.
T Consensus 179 ~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~-----v~~sp~~~~~~~~las~s~D~~v~iw~~~~~ 248 (316)
T 3bg1_A 179 IKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRD-----VAWAPSIGLPTSTIASCSQDGRVFIWTCDDA 248 (316)
T ss_dssp CCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEE-----EECCCCSSCSCCEEEEEETTCEEEEEECSST
T ss_pred cceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEE-----EEecCCCCCCCceEEEEcCCCeEEEEEccCc
Confidence 4789999999999999997652 44444 46666554 6677732 378999999999999999873
No 35
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=9.5e-35 Score=219.46 Aligned_cols=195 Identities=16% Similarity=0.208 Sum_probs=161.6
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCc----eeeEE-eccCCeeEEEEcC--CCCcEEEEecCCCEEEEEecCCc-----
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGD----PIDFY-LHERPVYGLSVDP--SQDAIFASACDDGRVLLFDTRSR----- 69 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~-~~~~~v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~----- 69 (224)
+.++++++|++|+.||+|++||+.++. ....+ +|...|++++|+| ++ ++|++++.||.|++||++++
T Consensus 18 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd~~~~~~~~~ 96 (351)
T 3f3f_A 18 VYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWEEDPDQEECS 96 (351)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEECTTSCTTS
T ss_pred EEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEecCCCccccc
Confidence 456788999999999999999998763 33444 7999999999999 46 89999999999999999887
Q ss_pred ----ccceeeccCCcCeEEEEEcCCC--CCeEEEecCCCcEEEEecCCCce-----------------------------
Q psy11351 70 ----EEATELAVNSGPFHAVMFNPVE--ARLVATANSKDGIALYDTRKPKE----------------------------- 114 (224)
Q Consensus 70 ----~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~i~d~~~~~~----------------------------- 114 (224)
+.+..+..|...|.+++|+| + +.++++++.||.|++||+++++.
T Consensus 97 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 97 GRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp SCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred ccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 44667788999999999999 7 89999999999999999876431
Q ss_pred -------------------------------eeEeecCCCceeEEEEcCCC----CeEeeeecCCCcEEEECCCC-----
Q psy11351 115 -------------------------------VLMQYGSCESCMSIRFNKAG----TQLLGLRRRLPPVLYNTRSS----- 154 (224)
Q Consensus 115 -------------------------------~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~v~v~d~~~~----- 154 (224)
...+..|...|.+++|+|++ ++|++++.|+.|++||++++
T Consensus 176 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 255 (351)
T 3f3f_A 176 CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLA 255 (351)
T ss_dssp CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----
T ss_pred ccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccc
Confidence 22233588899999999998 89999999999999999864
Q ss_pred -----------------------------------------Ccceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCe
Q psy11351 155 -----------------------------------------SPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFV 192 (224)
Q Consensus 155 -----------------------------------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 192 (224)
+.+..+ .|.+.+. .++|+| ++++|++++.||.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-----~~~~s~-~~~~l~s~~~dg~ 329 (351)
T 3f3f_A 256 SEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVW-----SVSWNL-TGTILSSAGDDGK 329 (351)
T ss_dssp -----------------------------------CCSEEEEEEEEECTTSSCEE-----EEEECS-SSCCEEEEETTSC
T ss_pred cCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEE-----EEEEcC-CCCEEEEecCCCc
Confidence 223333 2444444 467777 7899999999999
Q ss_pred EEEEeCCCCCeE
Q psy11351 193 LYMWRVPRDDIY 204 (224)
Q Consensus 193 v~iw~~~~~~~~ 204 (224)
|++|++.+++.+
T Consensus 330 v~iw~~~~~~~~ 341 (351)
T 3f3f_A 330 VRLWKATYSNEF 341 (351)
T ss_dssp EEEEEECTTSCE
T ss_pred EEEEecCcCcch
Confidence 999999998765
No 36
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.4e-34 Score=214.27 Aligned_cols=191 Identities=9% Similarity=0.181 Sum_probs=156.4
Q ss_pred ceEEEEEeCCCcEEEEeCCCCc--eeeEE-eccCCeeEEEEcCC--CCcEEEEecCCCEEEEEecCCccc--ceeeccCC
Q psy11351 7 IKVLRVIGNDDHVISHDMASGD--PIDFY-LHERPVYGLSVDPS--QDAIFASACDDGRVLLFDTRSREE--ATELAVNS 79 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~--~~~~~~~~ 79 (224)
+++|++|+.|++|++||+++++ .+..+ +|...|.+++|+|+ + .+|++++.|++|++||++++.. ...+.+|.
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~ 145 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKENGTTSPIIIDAHA 145 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCSSSCBCCEEEECCS
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecCCCceeeeeeeccc
Confidence 7899999999999999999874 33344 79999999999997 6 7999999999999999987642 45667899
Q ss_pred cCeEEEEEcCCC------------CCeEEEecCCCcEEEEecCCCc----eeeEeecCCCceeEEEEcCCC---CeEeee
Q psy11351 80 GPFHAVMFNPVE------------ARLVATANSKDGIALYDTRKPK----EVLMQYGSCESCMSIRFNKAG---TQLLGL 140 (224)
Q Consensus 80 ~~i~~~~~~~~~------------~~~l~~~~~dg~v~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~---~~l~~~ 140 (224)
..|.+++|+|.. +++|++|+.|+.|++||+++++ ....+.+|...|.+++|+|++ .+|+++
T Consensus 146 ~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEE
Confidence 999999999931 4799999999999999998765 344566899999999999985 899999
Q ss_pred ecCCCcEEEECCCCCc--c-eec---ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 141 RRRLPPVLYNTRSSSP--V-AQF---DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 141 ~~d~~v~v~d~~~~~~--~-~~~---~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+.|++|++||+++... . ..+ .+... +..++|+| ++++|++++.|+.|++|+......+
T Consensus 226 s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~-~g~~las~~~D~~v~lw~~~~~g~w 289 (297)
T 2pm7_B 226 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV-----LWRASWSL-SGNVLALSGGDNKVTLWKENLEGKW 289 (297)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSC-----EEEEEECS-SSCCEEEEETTSCEEEEEECTTSCE
T ss_pred ECCCcEEEEEeCCCCCccceeeeecccCCCc-----EEEEEECC-CCCEEEEEcCCCcEEEEEECCCCcE
Confidence 9999999999986431 1 122 23333 34578888 7999999999999999998754433
No 37
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.7e-34 Score=220.52 Aligned_cols=194 Identities=16% Similarity=0.181 Sum_probs=165.4
Q ss_pred CCC-cceEEEEEeCCCcEEEEeCCCC-------ceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccce
Q psy11351 3 SGD-PIKVLRVIGNDDHVISHDMASG-------DPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73 (224)
Q Consensus 3 ~~~-~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 73 (224)
.++ .+++|++|+.||+|++||+.++ +++..+ +|...|.+++|+|+++++|++++.|+.|++||+++++.+.
T Consensus 89 ~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 168 (402)
T 2aq5_A 89 WCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVL 168 (402)
T ss_dssp ECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred eCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccE
Confidence 444 6789999999999999999987 445555 8999999999999986799999999999999999999888
Q ss_pred ee--ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEe-ecCCCc-eeEEEEcCCCCeEeee---ecCCCc
Q psy11351 74 EL--AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQ-YGSCES-CMSIRFNKAGTQLLGL---RRRLPP 146 (224)
Q Consensus 74 ~~--~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~d~~v 146 (224)
.+ ..|...|.+++|+| ++.+|++++.||.|++||+++++.+..+ ..|.+. +.++.|+|++++|+++ +.|+.|
T Consensus 169 ~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i 247 (402)
T 2aq5_A 169 TLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQV 247 (402)
T ss_dssp EECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEE
T ss_pred EEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceE
Confidence 88 78999999999999 8999999999999999999999887777 567665 8999999999999998 789999
Q ss_pred EEEECCCCCc-ceec--ccCCcccceeeeEEEEeCCCCeEE-EEcCCCCeEEEEeCCCCCe
Q psy11351 147 VLYNTRSSSP-VAQF--DHEGYYNSCTMKSCCFAGTQDEYV-VSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 147 ~v~d~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~v~iw~~~~~~~ 203 (224)
++||+++++. +... .+...+. .++|+| ++++| ++|+.|+.|++||+.+++.
T Consensus 248 ~iwd~~~~~~~~~~~~~~~~~~v~-----~~~~s~-~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 248 ALWDTKHLEEPLSLQELDTSSGVL-----LPFFDP-DTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEEETTBCSSCSEEEECCCCSSCE-----EEEEET-TTTEEEEEETTCSCEEEEEECSSTT
T ss_pred EEEcCccccCCceEEeccCCCcee-----EEEEcC-CCCEEEEEEcCCCeEEEEEecCCCc
Confidence 9999998765 3232 3444433 467888 56666 5677899999999999874
No 38
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.1e-34 Score=226.68 Aligned_cols=191 Identities=14% Similarity=0.155 Sum_probs=157.4
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEE---eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec--cCCc
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFY---LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA--VNSG 80 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~ 80 (224)
.+++||+|+.||+|+|||+.+++..... +|.+.|++++|+|.+.++|++|+.||+|++||++++....... .+..
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~ 210 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINI 210 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSC
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCc
Confidence 3568999999999999999887654433 7999999999998544899999999999999998765332222 3344
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCC-eEeeeecCCCcEEEECCCCCccee
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGT-QLLGLRRRLPPVLYNTRSSSPVAQ 159 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~v~d~~~~~~~~~ 159 (224)
.+.+++|+| ++.+|++|+.||.|++||++. +.+..+..|...|.+++|+|++. ++++++.|+.|++||+++.+....
T Consensus 211 ~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~ 288 (435)
T 4e54_B 211 WFCSLDVSA-SSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKAS 288 (435)
T ss_dssp CCCCEEEET-TTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSC
T ss_pred cEEEEEECC-CCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccce
Confidence 678999999 899999999999999999975 45667778999999999999976 677899999999999998765544
Q ss_pred c----ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 160 F----DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 160 ~----~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+ .|...+.+ ++|+| ++.+|++++.|+.|++||+.+++..
T Consensus 289 ~~~~~~h~~~v~~-----~~~sp-dg~~l~s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 289 FLYSLPHRHPVNA-----ACFSP-DGARLLTTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp CSBCCBCSSCEEE-----CCBCT-TSSEEEEEESSSCEEEEESSSSSSE
T ss_pred EEEeeeccccccc-----eeECC-CCCeeEEEcCCCEEEEEECCCCccc
Confidence 4 35555554 56677 7999999999999999999988764
No 39
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.2e-34 Score=234.26 Aligned_cols=191 Identities=15% Similarity=0.240 Sum_probs=165.5
Q ss_pred cceEEEEEeCCCcEEEEeCCCCc-----eeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCC
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGD-----PIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNS 79 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 79 (224)
.+++|++|+.|++|++||+.+.. ....+ +|...|.+++|+|++ ++|++|+.|++|++||+.+++....+.+|.
T Consensus 394 ~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~ 472 (694)
T 3dm0_A 394 NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAAGVSTRRFVGHT 472 (694)
T ss_dssp CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEECCCCcceeEEeCCC
Confidence 35799999999999999997643 23333 899999999999998 899999999999999999999999999999
Q ss_pred cCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEe---ecCCCceeEEEEcCCC--CeEeeeecCCCcEEEECCCC
Q psy11351 80 GPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQ---YGSCESCMSIRFNKAG--TQLLGLRRRLPPVLYNTRSS 154 (224)
Q Consensus 80 ~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~---~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~v~d~~~~ 154 (224)
..|.+++|+| ++.+|++++.|+.|++||+......... .+|...|.+++|+|++ ..+++++.|+.|++||++++
T Consensus 473 ~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~ 551 (694)
T 3dm0_A 473 KDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC 551 (694)
T ss_dssp SCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC
T ss_pred CCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC
Confidence 9999999999 8899999999999999998755332222 2588899999999986 57999999999999999998
Q ss_pred Ccceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 155 SPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+....+ .|.+.+.+ ++|+| ++++|++|+.|+.|++||+.+++..
T Consensus 552 ~~~~~~~~h~~~v~~-----v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 552 KLRSTLAGHTGYVST-----VAVSP-DGSLCASGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp CEEEEECCCSSCEEE-----EEECT-TSSEEEEEETTSBCEEEETTTTEEE
T ss_pred cEEEEEcCCCCCEEE-----EEEeC-CCCEEEEEeCCCeEEEEECCCCceE
Confidence 888777 57776655 66777 7999999999999999999998765
No 40
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.3e-34 Score=235.91 Aligned_cols=193 Identities=12% Similarity=0.164 Sum_probs=163.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccccee---ecc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATE---LAV 77 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~---~~~ 77 (224)
+.+.++++|++|+.||+|+|||+.+++....+ +|...|++++|+|++ ++|++|+.|++|++||......... ..+
T Consensus 437 ~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~ 515 (694)
T 3dm0_A 437 VLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTISEGGEG 515 (694)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSTTS
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcceeeccCCCC
Confidence 45677899999999999999999999888777 899999999999998 8999999999999999865543222 246
Q ss_pred CCcCeEEEEEcCCCC--CeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCC
Q psy11351 78 NSGPFHAVMFNPVEA--RLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSS 155 (224)
Q Consensus 78 ~~~~i~~~~~~~~~~--~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~ 155 (224)
|...|.+++|+| ++ ..+++++.|+.|++||+++.+....+.+|...|++++|+|++++|++++.|+.|++||+++++
T Consensus 516 h~~~v~~~~~~~-~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 516 HRDWVSCVRFSP-NTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp CSSCEEEEEECS-CSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred CCCcEEEEEEeC-CCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 888999999999 54 689999999999999999988888888999999999999999999999999999999999998
Q ss_pred cceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 156 PVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.+..+.+...+ ..++|+| ++.++++++ ++.|++||+.+++.
T Consensus 595 ~~~~~~~~~~v-----~~~~~sp-~~~~l~~~~-~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 595 KLYSLEANSVI-----HALCFSP-NRYWLCAAT-EHGIKIWDLESKSI 635 (694)
T ss_dssp EEECCBCSSCE-----EEEEECS-SSSEEEEEE-TTEEEEEETTTTEE
T ss_pred eEEEecCCCcE-----EEEEEcC-CCcEEEEEc-CCCEEEEECCCCCC
Confidence 87777544433 3466777 566666654 55688888887754
No 41
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.9e-34 Score=215.21 Aligned_cols=192 Identities=13% Similarity=0.168 Sum_probs=157.8
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccce--eeccC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT--ELAVN 78 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~--~~~~~ 78 (224)
+..+.+.++++|+.|++|++||+++++.+..+ +|...|++++|+|++ ++|++++.|++|++||+....... ....|
T Consensus 83 ~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 161 (343)
T 2xzm_R 83 ALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGECKFSSAEKENH 161 (343)
T ss_dssp EECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCEEEECCTTTSC
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCceeeeecccCC
Confidence 34567889999999999999999999988777 899999999999998 899999999999999997433221 12378
Q ss_pred CcCeEEEEEcCCCC----------CeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEE
Q psy11351 79 SGPFHAVMFNPVEA----------RLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVL 148 (224)
Q Consensus 79 ~~~i~~~~~~~~~~----------~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v 148 (224)
...|.+++|+| .+ .++++++.|+.|++||. ..+....+..|...|.+++|+|+|++|++++.|+.|++
T Consensus 162 ~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~i 239 (343)
T 2xzm_R 162 SDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLI 239 (343)
T ss_dssp SSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred Cceeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEE
Confidence 88999999999 54 78999999999999994 45566677789999999999999999999999999999
Q ss_pred EECCC-CCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 149 YNTRS-SSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 149 ~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
||+.+ ..+...+.+... +..++|+| ++.+++++ .|+.|++|++.+++.
T Consensus 240 wd~~~~~~~~~~~~~~~~-----v~~v~~sp-~~~~la~~-~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 240 WDILNLTYPQREFDAGST-----INQIAFNP-KLQWVAVG-TDQGVKIFNLMTQSK 288 (343)
T ss_dssp EESSCCSSCSEEEECSSC-----EEEEEECS-SSCEEEEE-ESSCEEEEESSSCCS
T ss_pred EECCCCcccceeecCCCc-----EEEEEECC-CCCEEEEE-CCCCEEEEEeCCCCC
Confidence 99954 444444444443 34577888 57777655 578899999987754
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.4e-33 Score=209.01 Aligned_cols=194 Identities=16% Similarity=0.201 Sum_probs=169.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCce--eeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDP--IDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVN 78 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 78 (224)
+..++++++++++.||.|++||+.+++. ...+ .|...+.+++|+|++ +++++++.|+.|++||+++++.+..+..|
T Consensus 104 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~~~~~~~~~ 182 (337)
T 1gxr_A 104 KLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGH 182 (337)
T ss_dssp EECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCceeeeeecc
Confidence 3456788999999999999999998873 3333 789999999999998 89999999999999999999999999999
Q ss_pred CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcce
Q psy11351 79 SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVA 158 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~ 158 (224)
...+.+++|+| ++.++++++.||.|++||+++++....+ .+...+.+++|+|+++++++++.++.|++||+++++...
T Consensus 183 ~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~ 260 (337)
T 1gxr_A 183 TDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ 260 (337)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE
T ss_pred cCceEEEEECC-CCCEEEEEecCCcEEEEECCCCceEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE
Confidence 99999999999 8899999999999999999988665554 577889999999999999999999999999999887654
Q ss_pred ecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 159 QFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
...|...+.. ++|+| ++++|++++.||.|++||+.+++..
T Consensus 261 ~~~~~~~v~~-----~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 261 LHLHESCVLS-----LKFAY-CGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp ECCCSSCEEE-----EEECT-TSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EcCCccceeE-----EEECC-CCCEEEEecCCCcEEEEECCCCeEE
Confidence 4466666554 66777 7999999999999999999998775
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.9e-34 Score=229.92 Aligned_cols=184 Identities=19% Similarity=0.319 Sum_probs=162.9
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
++++++++|++++.|+.|++||.. ++.+..+ +|...|++++|+|++ ++|++++.|++|++||. +++.+..+.+|..
T Consensus 392 ~~s~dg~~l~~~~~d~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~ 468 (577)
T 2ymu_A 392 AFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDD-QTIASASDDKTVKLWNR-NGQLLQTLTGHSS 468 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTT-CCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEET-TSCEEEEEECCSS
T ss_pred EECCCCCEEEEEeCCCEEEEEeCC-CCEEEEecCCCCCeEEEEECCCC-CEEEEEcCCCEEEEEEC-CCCEEEEEcCCCC
Confidence 456788999999999999999965 4555544 899999999999998 89999999999999996 4667788899999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 160 (224)
.|.+++|+| ++++|++++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++.|+.|++||. +++.+..+
T Consensus 469 ~v~~~~~sp-d~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~ 545 (577)
T 2ymu_A 469 SVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL 545 (577)
T ss_dssp CEEEEEECT-TSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEE
T ss_pred CEEEEEEcC-CCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEE
Confidence 999999999 8999999999999999995 56678888899999999999999999999999999999996 56777777
Q ss_pred -ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEe
Q psy11351 161 -DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWR 197 (224)
Q Consensus 161 -~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~ 197 (224)
.|.+.+.+ ++|+| ++++|++++.|+.|++||
T Consensus 546 ~~h~~~v~~-----~~fs~-dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 546 TGHSSSVWG-----VAFSP-DGQTIASASSDKTVKLWN 577 (577)
T ss_dssp ECCSSCEEE-----EEECT-TSSCEEEEETTSCEEEEC
T ss_pred cCCCCCEEE-----EEEcC-CCCEEEEEeCCCEEEEeC
Confidence 67777665 66677 799999999999999997
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.1e-33 Score=210.71 Aligned_cols=194 Identities=15% Similarity=0.197 Sum_probs=170.0
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceee---EE---eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc--cce
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPID---FY---LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE--EAT 73 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~ 73 (224)
+.++.++++++++ ||.|++||+.+++... .+ +|...|.+++|+|++ ++|++++.|+.|++||+++++ ...
T Consensus 58 ~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~ 135 (337)
T 1gxr_A 58 TISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTPRIKA 135 (337)
T ss_dssp EECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC--EEEE
T ss_pred EEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCCcceee
Confidence 4567788999998 9999999998765332 22 688999999999998 899999999999999999877 556
Q ss_pred eeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCC
Q psy11351 74 ELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 74 ~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~ 153 (224)
.+..|...|.+++|+| +++++++++.||.|++||+++++....+..|...+.+++|+|++++|++++.|+.|++||+++
T Consensus 136 ~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 214 (337)
T 1gxr_A 136 ELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 214 (337)
T ss_dssp EEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCC
Confidence 6788899999999999 899999999999999999999988888888999999999999999999999999999999999
Q ss_pred CCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 154 SSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
++.+..+.+...+.. ++|+| +++++++++.|+.|++||+.+++..
T Consensus 215 ~~~~~~~~~~~~v~~-----~~~s~-~~~~l~~~~~~~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 215 GRQLQQHDFTSQIFS-----LGYCP-TGEWLAVGMESSNVEVLHVNKPDKY 259 (337)
T ss_dssp TEEEEEEECSSCEEE-----EEECT-TSSEEEEEETTSCEEEEETTSSCEE
T ss_pred CceEeeecCCCceEE-----EEECC-CCCEEEEEcCCCcEEEEECCCCCeE
Confidence 988887766665544 67777 7999999999999999999988754
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-33 Score=215.07 Aligned_cols=193 Identities=17% Similarity=0.245 Sum_probs=164.7
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCC--CCceeeEE-eccCCeeEEEEcCC--CCcEEEEecCCCEEEEEecCCcc--ccee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMA--SGDPIDFY-LHERPVYGLSVDPS--QDAIFASACDDGRVLLFDTRSRE--EATE 74 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~-~~~~~v~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~--~~~~ 74 (224)
+.++.+++|++|+.||.|++||+. +++.+..+ +|...|++++|+|+ + ++|++++.||.|++||+++++ .+..
T Consensus 18 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~ 96 (379)
T 3jrp_A 18 VLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWSQIAV 96 (379)
T ss_dssp EECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEEEcCCCceeEeee
Confidence 566788999999999999999998 44555555 79999999999976 6 899999999999999999887 6777
Q ss_pred eccCCcCeEEEEEcCCC--CCeEEEecCCCcEEEEecCCCc--eeeEeecCCCceeEEEEcC-------------CCCeE
Q psy11351 75 LAVNSGPFHAVMFNPVE--ARLVATANSKDGIALYDTRKPK--EVLMQYGSCESCMSIRFNK-------------AGTQL 137 (224)
Q Consensus 75 ~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~-------------~~~~l 137 (224)
+..|...|.+++|+| + +.++++++.|+.|++||+++.. ....+..|...|.+++|+| ++.++
T Consensus 97 ~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l 175 (379)
T 3jrp_A 97 HAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 175 (379)
T ss_dssp ECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEE
T ss_pred ecCCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEE
Confidence 788999999999999 6 8999999999999999998773 3445567999999999999 69999
Q ss_pred eeeecCCCcEEEECCCCCcce----ec-ccCCcccceeeeEEEEeCCC---CeEEEEcCCCCeEEEEeCCCCC
Q psy11351 138 LGLRRRLPPVLYNTRSSSPVA----QF-DHEGYYNSCTMKSCCFAGTQ---DEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 138 ~~~~~d~~v~v~d~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~---~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
++++.|+.|++||++++.... .+ .|...+. .++|+| + +.+|++++.||.|++||+.+++
T Consensus 176 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~-----~~~~sp-~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 176 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR-----DVAWSP-TVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE-----EEEECC-CCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred EEEeCCCeEEEEEecCCCcceeeEEEEecccCcEe-----EEEECC-CCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 999999999999998775432 33 3555544 467777 6 8999999999999999999875
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.7e-34 Score=221.27 Aligned_cols=200 Identities=12% Similarity=0.104 Sum_probs=170.7
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP 81 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 81 (224)
+.++.+++|++++.||.|++||+.+++....+.....+....|+|++ ++|++|+.|+.|++||+++++....+..|...
T Consensus 63 ~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~ 141 (420)
T 3vl1_A 63 TFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQM-RRFILGTTEGDIKVLDSNFNLQREIDQAHVSE 141 (420)
T ss_dssp EEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSS-CEEEEEETTSCEEEECTTSCEEEEETTSSSSC
T ss_pred eeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCC-CEEEEEECCCCEEEEeCCCcceeeecccccCc
Confidence 45667889999999999999999987766655333555555788988 89999999999999999999888888899999
Q ss_pred eEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecc
Q psy11351 82 FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFD 161 (224)
Q Consensus 82 i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~ 161 (224)
|.+++|+| ++.+|++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.
T Consensus 142 v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 220 (420)
T 3vl1_A 142 ITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFN 220 (420)
T ss_dssp EEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEee
Confidence 99999999 88999999999999999999998888888999999999999999999999999999999999998887773
Q ss_pred ----cCCcccceee----------------eEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 162 ----HEGYYNSCTM----------------KSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 162 ----~~~~~~~~~~----------------~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+...+..+.+ ..++|+| ++++|++|+.||.|++||+++++..
T Consensus 221 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~ 282 (420)
T 3vl1_A 221 RKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVFSKEQT 282 (420)
T ss_dssp BTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEETTTCCEE
T ss_pred cCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEECCCCcee
Confidence 2222322222 2245666 7999999999999999999998764
No 47
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.8e-33 Score=212.57 Aligned_cols=195 Identities=11% Similarity=0.124 Sum_probs=165.5
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCc--eeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccccee--ec
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGD--PIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATE--LA 76 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~--~~ 76 (224)
+.++++++|++++.|+.|++||+.+++ .+..+ +|...|++++|+|++ ++|++++.|+.|++||+++++.... +.
T Consensus 15 ~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 93 (372)
T 1k8k_C 15 AWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTWKPTLVIL 93 (372)
T ss_dssp EECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTEEEEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECCCCeeeeeEEee
Confidence 456788999999999999999999886 56655 799999999999998 8999999999999999988764433 46
Q ss_pred cCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCce---eeEe-ecCCCceeEEEEcCCCCeEeeeecCCCcEEEECC
Q psy11351 77 VNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKE---VLMQ-YGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTR 152 (224)
Q Consensus 77 ~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~ 152 (224)
.|...|.+++|+| +++++++++.|+.|++||++..+. ...+ ..|...|.+++|+|++++|++++.|+.|++||++
T Consensus 94 ~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 94 RINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred cCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 7888999999999 889999999999999999998763 2222 3578999999999999999999999999999964
Q ss_pred ------------------CCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 153 ------------------SSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 153 ------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
.++.+..+ .|.+.+. .++|+| ++++|++++.|+.|++||+++++..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 173 IKEVEERPAPTPWGSKMPFGELMFESSSSCGWVH-----GVCFSA-NGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp CTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEE-----EEEECS-SSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred cccccccccccccccccchhhheEecCCCCCeEE-----EEEECC-CCCEEEEEeCCCEEEEEECCCCcee
Confidence 45566666 4555544 467777 7899999999999999999988765
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.9e-33 Score=215.07 Aligned_cols=195 Identities=13% Similarity=0.087 Sum_probs=165.0
Q ss_pred CCCCcc-eEEEEEeCCCcEEEEeCCCCceeeEE---eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeecc
Q psy11351 2 ASGDPI-KVLRVIGNDDHVISHDMASGDPIDFY---LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAV 77 (224)
Q Consensus 2 a~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 77 (224)
+.++.+ ++|++|+.||+|++||+.+++....+ +|...|.+++|+|++.++|++++.|+.|++||++. +....+..
T Consensus 80 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~ 158 (383)
T 3ei3_B 80 EWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAK 158 (383)
T ss_dssp EECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEEC
T ss_pred EECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEec
Confidence 345566 89999999999999999988877665 59999999999994338999999999999999986 44444443
Q ss_pred ---CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCC-eEeeeecCCCcEEEECCC
Q psy11351 78 ---NSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGT-QLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 78 ---~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~v~d~~~ 153 (224)
|...|.+++|+| ++.++++++.|+.|++||++ ++....+..|...|.+++|+|+++ ++++++.|+.|++||+++
T Consensus 159 ~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 159 TDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp CCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred cCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 447899999999 88999999999999999995 667788888999999999999999 899999999999999987
Q ss_pred ----CCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 154 ----SSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 154 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+..+..+.|...+. .++|+|.++.+|++++.|+.|++||+++++..
T Consensus 237 ~~~~~~~~~~~~~~~~v~-----~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 237 IKDKNSYIAEMPHEKPVN-----AAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKP 286 (383)
T ss_dssp CCSTTCEEEEEECSSCEE-----EEEECTTTSCEEEEEESSSEEEEEETTBTTSC
T ss_pred CCcccceEEEecCCCceE-----EEEEcCCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 44555555655544 47888845899999999999999999987663
No 49
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.5e-33 Score=215.46 Aligned_cols=188 Identities=15% Similarity=0.254 Sum_probs=161.7
Q ss_pred EEEEEeCCCcEEEEeCCCCc----eeeEE-eccCCeeEEEEcC-CCCcEEEEecCCCEEEEEecCCc-------ccceee
Q psy11351 9 VLRVIGNDDHVISHDMASGD----PIDFY-LHERPVYGLSVDP-SQDAIFASACDDGRVLLFDTRSR-------EEATEL 75 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~----~~~~~-~~~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~-------~~~~~~ 75 (224)
++++++.||.|+||++.... .+..+ +|.+.|++++|+| ++ ++|++|+.||+|++||+.++ +++..+
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~ 127 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVLPLREPVITL 127 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEE
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCccccCCceEEe
Confidence 45567899999999996542 23333 8999999999999 66 89999999999999999987 567788
Q ss_pred ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEe--ecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCC
Q psy11351 76 AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQ--YGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 76 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~ 153 (224)
.+|...|.+++|+|++..++++++.|+.|++||+++++....+ ..|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 128 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 128 EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 8999999999999933479999999999999999999888888 67999999999999999999999999999999999
Q ss_pred CCcceec--ccCCc-ccceeeeEEEEeCCCCeEEEEc---CCCCeEEEEeCCCCCe
Q psy11351 154 SSPVAQF--DHEGY-YNSCTMKSCCFAGTQDEYVVSG---SDDFVLYMWRVPRDDI 203 (224)
Q Consensus 154 ~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~l~s~---~~d~~v~iw~~~~~~~ 203 (224)
++.+..+ .|.+. +. .+.|+| ++.+|++| +.|+.|++||+++++.
T Consensus 208 ~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 208 GTVVAEKDRPHEGTRPV-----HAVFVS-EGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp TEEEEEEECSSCSSSCC-----EEEECS-TTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred CceeeeeccCCCCCcce-----EEEEcC-CCcEEEEeccCCCCceEEEEcCccccC
Confidence 9888776 34443 33 367777 79999999 8999999999998765
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-34 Score=227.77 Aligned_cols=186 Identities=11% Similarity=0.084 Sum_probs=157.7
Q ss_pred ceEEEEEeCCCcEEEEeCCCCcee-----------eEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc-cce
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPI-----------DFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE-EAT 73 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~-----------~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~ 73 (224)
+.+||+++.||+|+|||+.+++.. ..+ +|...|++++|+|+ ..|++|+.||+|++||+++++ +..
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~~~~ 302 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEVPSF 302 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSSCSE
T ss_pred CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCCceE
Confidence 679999999999999999876421 233 79999999999985 489999999999999999764 455
Q ss_pred eeccCCcCeEEE--EEcCCCC-CeEEEecCCCcEEEEecCCCceeeEeecCC--CceeEEEEcCCCCeEeeeecCCCcEE
Q psy11351 74 ELAVNSGPFHAV--MFNPVEA-RLVATANSKDGIALYDTRKPKEVLMQYGSC--ESCMSIRFNKAGTQLLGLRRRLPPVL 148 (224)
Q Consensus 74 ~~~~~~~~i~~~--~~~~~~~-~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~v~v 148 (224)
.+.+|...|.++ .|+| ++ .+|++++.|++|+|||+++++.+..+.+|. ..|.+++|+|+++.+++++.|++|++
T Consensus 303 ~~~~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l 381 (524)
T 2j04_B 303 YDQVHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRA 381 (524)
T ss_dssp EEECSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEE
T ss_pred EeecccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEE
Confidence 688999999999 5677 66 899999999999999999887666666554 35889999999999999999999999
Q ss_pred EECCCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCC
Q psy11351 149 YNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 149 ~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 201 (224)
||++++..+..+ .|.+.|++ ++|+| ++++|++|+.|++|++||+..+
T Consensus 382 wd~~~~~~~~~l~gH~~~V~s-----va~Sp-~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 382 VPSRAAFAVHPLVSRETTITA-----IGVSR-LHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp EETTCTTCCEEEEECSSCEEE-----EECCS-SCCBCEEEETTTEEECCBSCSS
T ss_pred EECcccccceeeecCCCceEE-----EEeCC-CCCeEEEEECCCEEEEEechHh
Confidence 999998887776 67777665 56666 7999999999999999998654
No 51
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.6e-33 Score=214.57 Aligned_cols=188 Identities=12% Similarity=0.148 Sum_probs=162.6
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcC-CCCcEEEEecCCCEEEEEecCCcccceee---ccCCcC
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDP-SQDAIFASACDDGRVLLFDTRSREEATEL---AVNSGP 81 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~---~~~~~~ 81 (224)
+++|++|+.||.|++||+.+++.+..+ +|...|.+++|+| ++ ++|++++.||.|++||+++++.+..+ ..|...
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 163 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE 163 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCeEEEEecccccccCc
Confidence 689999999999999999999988877 6999999999999 66 89999999999999999999888777 689999
Q ss_pred eEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee----------------------------cCCCceeEEEEcCC
Q psy11351 82 FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY----------------------------GSCESCMSIRFNKA 133 (224)
Q Consensus 82 i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~----------------------------~~~~~v~~~~~~~~ 133 (224)
|.+++|+| ++.++++++.||.|++||+++++....+. .|...|.+++|+
T Consensus 164 v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 240 (366)
T 3k26_A 164 VLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-- 240 (366)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--
T ss_pred eeEEEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--
Confidence 99999999 88999999999999999999765433222 288999999999
Q ss_pred CCeEeeeecCCCcEEEECCCCCc--------------ceec-ccCCcccceeeeEEEEeCCC--CeEEEEcCCCCeEEEE
Q psy11351 134 GTQLLGLRRRLPPVLYNTRSSSP--------------VAQF-DHEGYYNSCTMKSCCFAGTQ--DEYVVSGSDDFVLYMW 196 (224)
Q Consensus 134 ~~~l~~~~~d~~v~v~d~~~~~~--------------~~~~-~~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~v~iw 196 (224)
++++++++.|+.|++||+++++. +..+ .|...+..+.+.+ + +++|++|+.||.|++|
T Consensus 241 ~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~------~~~~~~l~~~~~dg~i~vw 314 (366)
T 3k26_A 241 GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSM------DFWQKMLALGNQVGKLYVW 314 (366)
T ss_dssp TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEE------CTTSSEEEEECTTSCEEEE
T ss_pred CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcC------CCCCcEEEEEecCCcEEEE
Confidence 78999999999999999987654 3333 3566666655554 7 8999999999999999
Q ss_pred eCCCCCeE
Q psy11351 197 RVPRDDIY 204 (224)
Q Consensus 197 ~~~~~~~~ 204 (224)
|+.+++..
T Consensus 315 d~~~~~~~ 322 (366)
T 3k26_A 315 DLEVEDPH 322 (366)
T ss_dssp ECCSSSGG
T ss_pred ECCCCCCc
Confidence 99998653
No 52
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=209.41 Aligned_cols=194 Identities=13% Similarity=0.161 Sum_probs=168.9
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+.++.+++|++++.||.|++||+.+++.+..+ +|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+. +..
T Consensus 39 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~ 116 (369)
T 3zwl_B 39 KYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFT-KYCVTGSADYSIKLWDVSNGQCVATWK-SPV 116 (369)
T ss_dssp EECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEE-CSS
T ss_pred EEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEEEEee-cCC
Confidence 45678899999999999999999999988888 799999999999998 899999999999999999999888877 788
Q ss_pred CeEEEEEcCCCCCeEEEecCC-----CcEEEEecCCCce-----------eeEeecCCC--ceeEEEEcCCCCeEeeeec
Q psy11351 81 PFHAVMFNPVEARLVATANSK-----DGIALYDTRKPKE-----------VLMQYGSCE--SCMSIRFNKAGTQLLGLRR 142 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~~-----------~~~~~~~~~--~v~~~~~~~~~~~l~~~~~ 142 (224)
.+.+++|+| ++.++++++.+ +.|++||++.... ...+..+.. .+.+++|+|++++|++++.
T Consensus 117 ~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 195 (369)
T 3zwl_B 117 PVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK 195 (369)
T ss_dssp CEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET
T ss_pred CeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC
Confidence 999999999 88999999998 9999999986532 233334555 8999999999999999999
Q ss_pred CCCcEEEECCC-CCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 143 RLPPVLYNTRS-SSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 143 d~~v~v~d~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
|+.|++||+++ ++.+..+ .|...+.+ ++|+| ++.+|++++.|+.|++||+.+++..
T Consensus 196 dg~i~i~d~~~~~~~~~~~~~~~~~v~~-----~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 196 DGKISKYDVSNNYEYVDSIDLHEKSISD-----MQFSP-DLTYFITSSRDTNSFLVDVSTLQVL 253 (369)
T ss_dssp TSEEEEEETTTTTEEEEEEECCSSCEEE-----EEECT-TSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCEEEEEECCCCcEeEEEEecCCCceeE-----EEECC-CCCEEEEecCCceEEEEECCCCcee
Confidence 99999999998 5666666 46665544 67777 7999999999999999999998775
No 53
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.7e-34 Score=213.29 Aligned_cols=189 Identities=13% Similarity=0.144 Sum_probs=154.5
Q ss_pred ceEEEEEeCCCcEEEEeCCCCc--eeeEE-eccCCeeEEEEcCC--CCcEEEEecCCCEEEEEecCCccc---ceeeccC
Q psy11351 7 IKVLRVIGNDDHVISHDMASGD--PIDFY-LHERPVYGLSVDPS--QDAIFASACDDGRVLLFDTRSREE---ATELAVN 78 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~---~~~~~~~ 78 (224)
+++|++|+.|++|++||+++++ ....+ +|...|++++|+|+ + .+|++|+.|++|++||++.+.. ...+.+|
T Consensus 71 ~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g-~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h 149 (316)
T 3bg1_A 71 GNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYG-LILACGSSDGAISLLTYTGEGQWEVKKINNAH 149 (316)
T ss_dssp SSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTC-SCEEEECSSSCEEEEEECSSSCEEECCBTTSS
T ss_pred CCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCC-cEEEEEcCCCCEEEEecCCCCCcceeeeeccc
Confidence 7899999999999999999874 33444 79999999999998 5 7999999999999999987632 4556788
Q ss_pred CcCeEEEEEcCCC----------------CCeEEEecCCCcEEEEecCCC---ceeeEeecCCCceeEEEEcCCC----C
Q psy11351 79 SGPFHAVMFNPVE----------------ARLVATANSKDGIALYDTRKP---KEVLMQYGSCESCMSIRFNKAG----T 135 (224)
Q Consensus 79 ~~~i~~~~~~~~~----------------~~~l~~~~~dg~v~i~d~~~~---~~~~~~~~~~~~v~~~~~~~~~----~ 135 (224)
...+.+++|+|.. +.+|++|+.|+.|++||++.. +....+.+|...|.+++|+|++ +
T Consensus 150 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~ 229 (316)
T 3bg1_A 150 TIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS 229 (316)
T ss_dssp SSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC
T ss_pred cCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCc
Confidence 9999999999931 468999999999999999755 3445566899999999999986 7
Q ss_pred eEeeeecCCCcEEEECCCCC---c-ceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 136 QLLGLRRRLPPVLYNTRSSS---P-VAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 136 ~l~~~~~d~~v~v~d~~~~~---~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
+|++++.|++|++|++++.. . ...+ .|.+.+. .++|+| ++++|++++.|+.|++|+.....
T Consensus 230 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~-----~v~~sp-~g~~las~~~D~~v~lw~~~~~g 295 (316)
T 3bg1_A 230 TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVW-----HVSWSI-TANILAVSGGDNKVTLWKESVDG 295 (316)
T ss_dssp EEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEE-----EEEECT-TTCCEEEEESSSCEEEEEECTTS
T ss_pred eEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEE-----EEEEcC-CCCEEEEEcCCCeEEEEEECCCC
Confidence 89999999999999997631 1 1222 3544444 477888 79999999999999999987443
No 54
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-32 Score=222.07 Aligned_cols=190 Identities=19% Similarity=0.308 Sum_probs=165.0
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+..++++++++++.|++|++||.. ++.+..+ +|...|.+++|+|++ ++|++++.|+.|++||. +++.+..+.+|..
T Consensus 351 ~~s~~g~~l~~~~~dg~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~ 427 (577)
T 2ymu_A 351 AFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNR-NGQLLQTLTGHSS 427 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEETT-CCEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECT-TCCEEEEEECCSS
T ss_pred EECCCCCEEEEEeCCCEEEEEcCC-CCEEEEecCCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeC-CCCEEEEecCCCC
Confidence 456788999999999999999965 4555544 899999999999998 89999999999999995 5677888899999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 160 (224)
.|.+++|+| +++++++++.|+.|++||.. ++....+..|...|.+++|+|++++|++++.|+.|++||. +++.+..+
T Consensus 428 ~v~~~~~s~-d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~ 504 (577)
T 2ymu_A 428 SVWGVAFSP-DDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL 504 (577)
T ss_dssp CEEEEEECT-TSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEE
T ss_pred CeEEEEECC-CCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEE
Confidence 999999999 88999999999999999964 5577788889999999999999999999999999999995 56777777
Q ss_pred -ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 161 -DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 161 -~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
.|...+++ ++|+| ++++|++++.|+.|++||. +++..
T Consensus 505 ~~h~~~v~~-----l~~s~-dg~~l~s~~~dg~v~lwd~-~~~~~ 542 (577)
T 2ymu_A 505 TGHSSSVRG-----VAFSP-DGQTIASASDDKTVKLWNR-NGQLL 542 (577)
T ss_dssp ECCSSCEEE-----EEECT-TSSCEEEEETTSEEEEECT-TSCEE
T ss_pred eCCCCCEEE-----EEEcC-CCCEEEEEECcCEEEEEeC-CCCEE
Confidence 57766654 66777 7999999999999999996 45443
No 55
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.4e-33 Score=215.69 Aligned_cols=199 Identities=14% Similarity=0.125 Sum_probs=148.3
Q ss_pred CcceEEEEEeCCCcEEEEeCCCCceeeE-----E-eccCCeeEEEEcC--------CCCcEEEEecCCCEEEEEecCCcc
Q psy11351 5 DPIKVLRVIGNDDHVISHDMASGDPIDF-----Y-LHERPVYGLSVDP--------SQDAIFASACDDGRVLLFDTRSRE 70 (224)
Q Consensus 5 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~-----~-~~~~~v~~~~~~~--------~~~~~l~s~~~d~~i~iwd~~~~~ 70 (224)
..+.++++++.|++|+|||.++++.... + +|.+.|++++|+| ++ ++|++|+.|++|+|||++++.
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEETTE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCCCc
Confidence 3456899999999999999998865432 2 7999999999997 66 899999999999999999888
Q ss_pred cceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEe-------------------------ecCCCce
Q psy11351 71 EATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQ-------------------------YGSCESC 125 (224)
Q Consensus 71 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~-------------------------~~~~~~v 125 (224)
+...+..|...+.+++|+|.+..+|++++.|+.|++||+++++..... .+|...+
T Consensus 178 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 178 PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 888888899999999999955578999999999999999876543221 2467788
Q ss_pred eEEEEc-CCCCeEeeeecCCCcEEEECCCCCcceec-ccCCcccceee-------------eEEEEeC-CCCeEEEEcCC
Q psy11351 126 MSIRFN-KAGTQLLGLRRRLPPVLYNTRSSSPVAQF-DHEGYYNSCTM-------------KSCCFAG-TQDEYVVSGSD 189 (224)
Q Consensus 126 ~~~~~~-~~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~-------------~~~~~~~-~~~~~l~s~~~ 189 (224)
.++.|+ |+++.+++++.|+.+++||+..++....+ .+...+..+.+ ..++|+| .++.++++|+.
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~ 337 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ 337 (393)
T ss_dssp SEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT
T ss_pred eeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC
Confidence 899986 79999999999999999999877665554 23222222111 1134444 34557788999
Q ss_pred CCeEEEEeCCCCCeE
Q psy11351 190 DFVLYMWRVPRDDIY 204 (224)
Q Consensus 190 d~~v~iw~~~~~~~~ 204 (224)
||.|++||+.+++..
T Consensus 338 Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 338 HGLIQLINTYEKDSN 352 (393)
T ss_dssp TTEEEEEETTCTTCC
T ss_pred CCEEEEEECCCCcEE
Confidence 999999999998764
No 56
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-32 Score=213.74 Aligned_cols=198 Identities=13% Similarity=0.220 Sum_probs=166.2
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCC----CceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc------
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMAS----GDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE------ 70 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~------ 70 (224)
+.++++++|++++.||.|++||+.+ .+.+..+ +|...|++++|+|++.++|++++.|+.|++||+++++
T Consensus 74 ~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 153 (416)
T 2pm9_A 74 DWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY 153 (416)
T ss_dssp EECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC
T ss_pred EECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc
Confidence 4566788999999999999999987 3355555 8999999999999844899999999999999999876
Q ss_pred cce---eeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecC------CCceeEEEEcCCC-CeEeee
Q psy11351 71 EAT---ELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGS------CESCMSIRFNKAG-TQLLGL 140 (224)
Q Consensus 71 ~~~---~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~ 140 (224)
... .+..|...|.+++|+|+++.++++++.|+.|++||+++++....+..+ ...+.+++|+|++ .+++++
T Consensus 154 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 233 (416)
T 2pm9_A 154 TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATA 233 (416)
T ss_dssp CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEE
T ss_pred cccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEE
Confidence 322 236788999999999944899999999999999999998877777665 7899999999997 588999
Q ss_pred ecCC---CcEEEECCCC-Ccceecc--cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 141 RRRL---PPVLYNTRSS-SPVAQFD--HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 141 ~~d~---~v~v~d~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+.|+ .|++||++++ +++..+. |...+ ..++|+|.++.+|++++.|+.|++||+.+++..
T Consensus 234 ~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v-----~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 234 TGSDNDPSILIWDLRNANTPLQTLNQGHQKGI-----LSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp ECCSSSCCCCEEETTSTTSCSBCCCSCCSSCE-----EEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred ECCCCCceEEEEeCCCCCCCcEEeecCccCce-----eEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 9998 9999999986 4555553 54444 447888866899999999999999999998775
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-31 Score=207.88 Aligned_cols=188 Identities=14% Similarity=0.189 Sum_probs=165.9
Q ss_pred eEEEEEeCCCcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEE
Q psy11351 8 KVLRVIGNDDHVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAV 85 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~ 85 (224)
+.+++++.|+.|++||+.+++....+ .|...|++++|+|++ ++|++|+.||.|++||+.+++.+..+..|...|.++
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 182 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDG-SFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCL 182 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCC-CEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEE
Confidence 45788889999999999999988776 479999999999998 899999999999999999999999999999999999
Q ss_pred EEcCCCCCeEEEecCCCcEEEEecCC-CceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec-ccC
Q psy11351 86 MFNPVEARLVATANSKDGIALYDTRK-PKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF-DHE 163 (224)
Q Consensus 86 ~~~~~~~~~l~~~~~dg~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~~~ 163 (224)
+|++ .++++++.||.|++||++. ......+..|...|.+++|+|++++|++++.|+.|++||+++++++..+ .|.
T Consensus 183 ~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 259 (401)
T 4aez_A 183 SWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHN 259 (401)
T ss_dssp EEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCS
T ss_pred EECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCc
Confidence 9954 6999999999999999994 5556677789999999999999999999999999999999998888777 566
Q ss_pred CcccceeeeEEEEeCCCCeEEEEcC--CCCeEEEEeCCCCCeE
Q psy11351 164 GYYNSCTMKSCCFAGTQDEYVVSGS--DDFVLYMWRVPRDDIY 204 (224)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~l~s~~--~d~~v~iw~~~~~~~~ 204 (224)
..+.+ ++|+|.+..++++++ .|+.|++||+.+++..
T Consensus 260 ~~v~~-----~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 260 AAVKA-----VAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp SCCCE-----EEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred ceEEE-----EEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 66554 777775567777765 8999999999998775
No 58
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-32 Score=210.49 Aligned_cols=193 Identities=15% Similarity=0.171 Sum_probs=167.9
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecC-CcccceeeccCC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTR-SREEATELAVNS 79 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~ 79 (224)
+.++++++|++|+.||.|++||+.+++.+..+ +|...|.+++|+ + +++++++.|+.|++||++ .+.....+..|.
T Consensus 141 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 217 (401)
T 4aez_A 141 KWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--R-HVLSSGSRSGAIHHHDVRIANHQIGTLQGHS 217 (401)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred EECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--C-CEEEEEcCCCCEEEEecccCcceeeEEcCCC
Confidence 45667889999999999999999999988877 899999999995 3 699999999999999998 455677888999
Q ss_pred cCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEe-eee--cCCCcEEEECCCCCc
Q psy11351 80 GPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLL-GLR--RRLPPVLYNTRSSSP 156 (224)
Q Consensus 80 ~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~--~d~~v~v~d~~~~~~ 156 (224)
..|.+++|+| ++.++++++.|+.|++||+++++....+..|...|.+++|+|++..++ +++ .|+.|++||+++++.
T Consensus 218 ~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 218 SEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred CCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 9999999999 899999999999999999999888888888999999999999876554 443 699999999999998
Q ss_pred ceecccCCcccceeeeEEEEeCCCCeEEEE--cCCCCeEEEEeCCCCCeE
Q psy11351 157 VAQFDHEGYYNSCTMKSCCFAGTQDEYVVS--GSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--~~~d~~v~iw~~~~~~~~ 204 (224)
+..+.+...+. .++|+| ++.++++ |+.||.|++||+.+++..
T Consensus 297 ~~~~~~~~~v~-----~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~ 340 (401)
T 4aez_A 297 VNTVDAGSQVT-----SLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLT 340 (401)
T ss_dssp EEEEECSSCEE-----EEEECS-SSSEEEEEECTTTCEEEEEEEETTEEE
T ss_pred EEEEeCCCcEE-----EEEECC-CCCeEEEEeecCCCcEEEEecCCccce
Confidence 88886655544 467777 6888888 668999999999987654
No 59
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.3e-32 Score=204.59 Aligned_cols=186 Identities=17% Similarity=0.215 Sum_probs=150.0
Q ss_pred eEEEEEeCCCcEEEEeCCCCceeeEE---eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccccee----------
Q psy11351 8 KVLRVIGNDDHVISHDMASGDPIDFY---LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATE---------- 74 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~---------- 74 (224)
++||+|. |++|+|||+++++++..+ +|...|++++|+|++ ++|++|+.|++|++||+++++.+..
T Consensus 37 ~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~ 114 (318)
T 4ggc_A 37 NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS 114 (318)
T ss_dssp SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeEEEecCccceEEE
Confidence 4677664 999999999999988776 578899999999998 8999999999999999987764432
Q ss_pred -------------------------------eccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceee----Ee-
Q psy11351 75 -------------------------------LAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVL----MQ- 118 (224)
Q Consensus 75 -------------------------------~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~----~~- 118 (224)
+.+|...+..+.+.+ .++++++++.|+.|++||+++++... ..
T Consensus 115 ~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 193 (318)
T 4ggc_A 115 LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT 193 (318)
T ss_dssp EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBSCCSEEEC
T ss_pred eecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCcccccceeeec
Confidence 235566778888888 88999999999999999998643110 00
Q ss_pred -------------------------------------------ecCCCceeEEEEcCCCCeEeeee--cCCCcEEEECCC
Q psy11351 119 -------------------------------------------YGSCESCMSIRFNKAGTQLLGLR--RRLPPVLYNTRS 153 (224)
Q Consensus 119 -------------------------------------------~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~v~d~~~ 153 (224)
..+...+..+.|+|+++.+++++ .|+.|++||+++
T Consensus 194 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~ 273 (318)
T 4ggc_A 194 QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 273 (318)
T ss_dssp CCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred ccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC
Confidence 01334567788888888777654 789999999999
Q ss_pred CCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 154 SSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 154 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
++++..+ .|.+.|.+ ++|+| ++++|++|+.||+|++||+.+.+
T Consensus 274 ~~~~~~l~gH~~~V~~-----l~~sp-dg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 274 MAKVAELKGHTSRVLS-----LTMSP-DGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp CCEEEEECCCSSCEEE-----EEECT-TSSCEEEEETTTEEEEECCSCCC
T ss_pred CcEEEEEcCCCCCEEE-----EEEcC-CCCEEEEEecCCeEEEEECCCCC
Confidence 9999988 57777665 66677 79999999999999999997654
No 60
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.8e-32 Score=213.75 Aligned_cols=189 Identities=12% Similarity=0.152 Sum_probs=165.0
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEE
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHA 84 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~ 84 (224)
+++++++|+.||+|++||+.+++.+..+ +|.+.|++++|+|++ .+++|+.||+|++||+++++.+..+.+|...|.+
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 208 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRC 208 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEE
Confidence 4568999999999999999999988887 899999999999976 8999999999999999999999999999999999
Q ss_pred EEEcC-CCCCeEEEecCCCcEEEEecCCCce-----------------------eeEeecCCCceeEEEEcCCCCeEeee
Q psy11351 85 VMFNP-VEARLVATANSKDGIALYDTRKPKE-----------------------VLMQYGSCESCMSIRFNKAGTQLLGL 140 (224)
Q Consensus 85 ~~~~~-~~~~~l~~~~~dg~v~i~d~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~l~~~ 140 (224)
++|++ .++.++++++.|+.|++||+++... .....+|...+.++ ++++++++++
T Consensus 209 l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~ 286 (464)
T 3v7d_B 209 LDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSG 286 (464)
T ss_dssp EEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEE
T ss_pred EEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEE
Confidence 99984 1678999999999999999987653 22344677777766 6778999999
Q ss_pred ecCCCcEEEECCCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 141 RRRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 141 ~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+.|+.|++||+++++.+..+ .|...+.+ ++|+| +++++++|+.|+.|++||+.+++..
T Consensus 287 ~~d~~i~vwd~~~~~~~~~~~~~~~~v~~-----~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 287 SYDNTLIVWDVAQMKCLYILSGHTDRIYS-----TIYDH-ERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEE-----EEEET-TTTEEEEEETTSCEEEEETTTTEEE
T ss_pred eCCCeEEEEECCCCcEEEEecCCCCCEEE-----EEEcC-CCCEEEEEeCCCcEEEEECCCCcEE
Confidence 99999999999999988888 46666554 66677 7999999999999999999998765
No 61
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-33 Score=217.52 Aligned_cols=199 Identities=14% Similarity=0.182 Sum_probs=161.4
Q ss_pred CCCC-cceEEEEEeCCCcEEEEeCCC---Cc---eeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecC---Cccc
Q psy11351 2 ASGD-PIKVLRVIGNDDHVISHDMAS---GD---PIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTR---SREE 71 (224)
Q Consensus 2 a~~~-~~~~l~~~~~dg~i~iwd~~~---~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~---~~~~ 71 (224)
+..+ ++++|++|+.||+|++||+.+ +. ....++|...|++++|+|++ ++|++|+.||+|++||++ +++.
T Consensus 70 ~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~ 148 (437)
T 3gre_A 70 AVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNF-DAFAVSSKDGQIIVLKVNHYQQESE 148 (437)
T ss_dssp EEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEEEEEEEETTE
T ss_pred EECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEEeccccCCce
Confidence 3455 788999999999999999876 43 34455899999999999998 899999999999999995 4443
Q ss_pred ceeecc------------CCcCeEEEE--EcCCCCCeEEEecCCCcEEEEecCCCceeeEeec--CCCceeEEEEcCCCC
Q psy11351 72 ATELAV------------NSGPFHAVM--FNPVEARLVATANSKDGIALYDTRKPKEVLMQYG--SCESCMSIRFNKAGT 135 (224)
Q Consensus 72 ~~~~~~------------~~~~i~~~~--~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~ 135 (224)
...+.. +...+.++. +++ ++.++++++.|+.|++||+++++....+.. |...|++++|+|+++
T Consensus 149 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 227 (437)
T 3gre_A 149 VKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECC 227 (437)
T ss_dssp EEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSC
T ss_pred eeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCC
Confidence 332221 445566666 556 789999999999999999999988888887 889999999999999
Q ss_pred eEeeeecCCCcEEEECCCCCcceec--ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 136 QLLGLRRRLPPVLYNTRSSSPVAQF--DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 136 ~l~~~~~d~~v~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+|++++.|+.|++||+++++++..+ .+...+.++.+.+ .|+| ++.+|++|+.|+.|++||+++++..
T Consensus 228 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~ 296 (437)
T 3gre_A 228 VLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQ-FYGK-NSVIVVGGSSKTFLTIWNFVKGHCQ 296 (437)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECT-TTCT-TEEEEEEESTTEEEEEEETTTTEEE
T ss_pred EEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecc-ccCC-CccEEEEEcCCCcEEEEEcCCCcEE
Confidence 9999999999999999999888876 4444444432211 3334 6789999999999999999998764
No 62
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-32 Score=205.86 Aligned_cols=187 Identities=8% Similarity=0.058 Sum_probs=153.3
Q ss_pred EEEEeCCCcEEEEeCC---------CCceeeEE--eccCCeeEEEEcC--CCCcEEEEecCCCEEEEEecCCcccceeec
Q psy11351 10 LRVIGNDDHVISHDMA---------SGDPIDFY--LHERPVYGLSVDP--SQDAIFASACDDGRVLLFDTRSREEATELA 76 (224)
Q Consensus 10 l~~~~~dg~i~iwd~~---------~~~~~~~~--~~~~~v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 76 (224)
+++++.|++|++|+.. +++.+... +|...|.+++|+| ++ +++++++.|++|++||+++++......
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~ 166 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQYIVHS 166 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEEEEEC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence 8999999999999765 44444433 6778999999999 88 899999999999999999998766553
Q ss_pred -cCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCcee-eEeec-CCCceeEEEEcCCCCeEeeeecCCCcEEEECCC
Q psy11351 77 -VNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEV-LMQYG-SCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 77 -~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~ 153 (224)
.+...+.+++|+| ++.++++|+.||.|++||+++++.. ..+.. |...|.+++|+|++.+|++++ ++.|++||+++
T Consensus 167 ~~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~ 244 (343)
T 3lrv_A 167 AKSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRK 244 (343)
T ss_dssp CCSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTS
T ss_pred cCCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCC
Confidence 4455899999999 8999999999999999999998876 66776 999999999999999999999 45999999999
Q ss_pred CCcceecc----cCCcccceeeeEEEEeCCCCeEEEEcCC-CCeEEEEeCCCCCe
Q psy11351 154 SSPVAQFD----HEGYYNSCTMKSCCFAGTQDEYVVSGSD-DFVLYMWRVPRDDI 203 (224)
Q Consensus 154 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~s~~~-d~~v~iw~~~~~~~ 203 (224)
++....+. +...+.. ..++|+| ++++|++++. |+.+++|++.+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~---~~~~~~~-~g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 245 DVGTLAYPTYTIPEFKTGT---VTYDIDD-SGKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp STTCBSSCCCBC-----CC---EEEEECT-TSSEEEEEETTTTEEEEEEECTTTC
T ss_pred CCcceeecccccccccccc---eEEEECC-CCCEEEEecCCCCcEEEEEEccccc
Confidence 88766652 2222222 3488888 6999999888 99999999966543
No 63
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.7e-33 Score=214.53 Aligned_cols=189 Identities=14% Similarity=0.154 Sum_probs=163.4
Q ss_pred CcceE-EEEEeCCCcEEEEeCCC------Cceee-----EE-e-------ccCCeeEEEEcCCCCcEEEEecCCCEEEEE
Q psy11351 5 DPIKV-LRVIGNDDHVISHDMAS------GDPID-----FY-L-------HERPVYGLSVDPSQDAIFASACDDGRVLLF 64 (224)
Q Consensus 5 ~~~~~-l~~~~~dg~i~iwd~~~------~~~~~-----~~-~-------~~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 64 (224)
..+++ |++++.||.|++||+.+ ++.+. .+ + |...|.+++|+|++ ++++++.|+.|++|
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQIS 212 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEE
Confidence 56788 99999999999999988 65554 44 3 78999999999987 99999999999999
Q ss_pred ecCCcccceeecc---C---CcCeEEEEEcCCCCCeEEEecCC---CcEEEEecCCCceeeEeec-------------CC
Q psy11351 65 DTRSREEATELAV---N---SGPFHAVMFNPVEARLVATANSK---DGIALYDTRKPKEVLMQYG-------------SC 122 (224)
Q Consensus 65 d~~~~~~~~~~~~---~---~~~i~~~~~~~~~~~~l~~~~~d---g~v~i~d~~~~~~~~~~~~-------------~~ 122 (224)
|+++++.+..+.. | ...|.+++|+| ++.+|++++.| +.|++||+++++.+..+.. |.
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS 291 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBS
T ss_pred ECCCCceeEEEeccccccccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccC
Confidence 9999998888888 8 99999999999 89999999999 9999999999988888877 89
Q ss_pred CceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecc-------c---------------CCcccceeeeEEEEeCCC
Q psy11351 123 ESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFD-------H---------------EGYYNSCTMKSCCFAGTQ 180 (224)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~-------~---------------~~~~~~~~~~~~~~~~~~ 180 (224)
..|.+++|+|++++|++++.|+.|++||+++++.+..+. | ... +..++|+| +
T Consensus 292 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----v~~~~~~~-~ 365 (397)
T 1sq9_A 292 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG-----VFDVKFLK-K 365 (397)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC-----EEEEEEEC-T
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCc-----eeEEEecc-c
Confidence 999999999999999999999999999999998887774 2 333 44577887 5
Q ss_pred C----------eEEEEcCCCCeEEEEeCCCCC
Q psy11351 181 D----------EYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 181 ~----------~~l~s~~~d~~v~iw~~~~~~ 202 (224)
+ ++|++++.||.|++|++.+++
T Consensus 366 g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 366 GWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 6 799999999999999998764
No 64
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-32 Score=206.94 Aligned_cols=191 Identities=10% Similarity=0.195 Sum_probs=159.8
Q ss_pred ceEEEEEeCCCcEEEEeCCCCc--eeeEE-eccCCeeEEEEcCC--CCcEEEEecCCCEEEEEecCCccc--ceeeccCC
Q psy11351 7 IKVLRVIGNDDHVISHDMASGD--PIDFY-LHERPVYGLSVDPS--QDAIFASACDDGRVLLFDTRSREE--ATELAVNS 79 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~~--~~~~~~~~ 79 (224)
+++|++++.||.|++||+.+++ .+..+ .|...|.+++|+|+ + .+|++++.|+.|++||++++.. ...+..|.
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 147 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIIDAHA 147 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCCCEEEEECCT
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCceeeEEecCCC
Confidence 7899999999999999999986 44444 79999999999999 7 8999999999999999988743 44567889
Q ss_pred cCeEEEEEcCC------------CCCeEEEecCCCcEEEEecCCCce----eeEeecCCCceeEEEEcCC---CCeEeee
Q psy11351 80 GPFHAVMFNPV------------EARLVATANSKDGIALYDTRKPKE----VLMQYGSCESCMSIRFNKA---GTQLLGL 140 (224)
Q Consensus 80 ~~i~~~~~~~~------------~~~~l~~~~~dg~v~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~---~~~l~~~ 140 (224)
..|.+++|+|. ++.++++++.||.|++||++++.. ...+..|...|.+++|+|+ +++|+++
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 99999999994 488999999999999999987653 2345579999999999999 8999999
Q ss_pred ecCCCcEEEECCCCCcce---ecc---cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 141 RRRLPPVLYNTRSSSPVA---QFD---HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 141 ~~d~~v~v~d~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+.|+.|++||++++.... ... +... +..++|+| ++++|++++.||.|++|++..+..+
T Consensus 228 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 228 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV-----LWRASWSL-SGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSC-----EEEEEECS-SSCCEEEEESSSSEEEEEEEETTEE
T ss_pred eCCCEEEEEeCCCCCccceeeeeccccCCCc-----EEEEEEcC-CCCEEEEecCCCcEEEEeCCCCCcc
Confidence 999999999998864221 111 3333 34577888 7999999999999999999866554
No 65
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-33 Score=215.08 Aligned_cols=195 Identities=21% Similarity=0.239 Sum_probs=167.8
Q ss_pred CCCc-ceEEEEEeCCCcEEEEeCCCCc------eeeE----EeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccc
Q psy11351 3 SGDP-IKVLRVIGNDDHVISHDMASGD------PIDF----YLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREE 71 (224)
Q Consensus 3 ~~~~-~~~l~~~~~dg~i~iwd~~~~~------~~~~----~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 71 (224)
..+. +++|++++.||+|++||+.+++ .... ..|...|.+++|+|++..+|++++.|+.|++||+++++.
T Consensus 121 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 200 (416)
T 2pm9_A 121 FNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE 200 (416)
T ss_dssp ECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE
T ss_pred EcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc
Confidence 3444 7899999999999999999876 3222 278999999999999558999999999999999999988
Q ss_pred ceeeccC------CcCeEEEEEcCCCCCeEEEecCCC---cEEEEecCCC-ceeeEee-cCCCceeEEEEcC-CCCeEee
Q psy11351 72 ATELAVN------SGPFHAVMFNPVEARLVATANSKD---GIALYDTRKP-KEVLMQY-GSCESCMSIRFNK-AGTQLLG 139 (224)
Q Consensus 72 ~~~~~~~------~~~i~~~~~~~~~~~~l~~~~~dg---~v~i~d~~~~-~~~~~~~-~~~~~v~~~~~~~-~~~~l~~ 139 (224)
+..+..+ ...|.+++|+|++..++++++.|+ .|++||+++. .....+. .|...|.+++|+| ++++|++
T Consensus 201 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s 280 (416)
T 2pm9_A 201 VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLS 280 (416)
T ss_dssp EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEE
T ss_pred ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEE
Confidence 8887766 788999999994457999999998 9999999986 4455555 7999999999999 8999999
Q ss_pred eecCCCcEEEECCCCCcceec-ccCCcccceeeeEEEEeCCCC-eEEEEcCCCCeEEEEeCCCCCe
Q psy11351 140 LRRRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQD-EYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 140 ~~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
++.|+.|++||+++++++..+ .|...+.+ ++|+| ++ .+|++++.|+.|++||+.+++.
T Consensus 281 ~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~-----~~~s~-~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 281 SGRDNTVLLWNPESAEQLSQFPARGNWCFK-----TKFAP-EAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp EESSSEEEEECSSSCCEEEEEECSSSCCCC-----EEECT-TCTTEEEECCSSSEEEEEESCCCCC
T ss_pred EeCCCCEEEeeCCCCccceeecCCCCceEE-----EEECC-CCCCEEEEEecCCcEEEEEccCCCC
Confidence 999999999999999988888 57777665 66777 56 8999999999999999998765
No 66
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-32 Score=212.62 Aligned_cols=196 Identities=12% Similarity=0.083 Sum_probs=166.7
Q ss_pred CCCCcceEE-EEEeCCCcEEEEeCC--CCceeeEE---eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccce--
Q psy11351 2 ASGDPIKVL-RVIGNDDHVISHDMA--SGDPIDFY---LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT-- 73 (224)
Q Consensus 2 a~~~~~~~l-~~~~~dg~i~iwd~~--~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-- 73 (224)
+.++.+++| ++++.||+|++||+. +++.+..+ .|...|++++|+|++ ++|++|+.|+.+++|++.+++...
T Consensus 109 ~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 109 RLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTSCCCSSCC
T ss_pred EEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEecCCccccccc
Confidence 456778885 899999999999999 88877766 577899999999998 899999999999999998877554
Q ss_pred --eeccCCcCeEEEEEcCCC---CCeEEEecCCCcEEEEecCCCceeeE-eecCCCceeEEEEcCCCCeEeeeecCCCcE
Q psy11351 74 --ELAVNSGPFHAVMFNPVE---ARLVATANSKDGIALYDTRKPKEVLM-QYGSCESCMSIRFNKAGTQLLGLRRRLPPV 147 (224)
Q Consensus 74 --~~~~~~~~i~~~~~~~~~---~~~l~~~~~dg~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 147 (224)
.+.+|...|.+++|+| + +.+|++++.|+.|++||+++++.+.. ..+|...|.+++|+ ++++|++++.|+.|+
T Consensus 188 ~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~ 265 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIF 265 (450)
T ss_dssp CCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEE
T ss_pred ceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEE
Confidence 7788999999999999 7 88999999999999999998877766 44799999999999 999999999999999
Q ss_pred EEECCCCCcceecccCCc---------------------ccceeeeEEEEeCCCCeEEEEcC-CCCeEEEEeC--CCC
Q psy11351 148 LYNTRSSSPVAQFDHEGY---------------------YNSCTMKSCCFAGTQDEYVVSGS-DDFVLYMWRV--PRD 201 (224)
Q Consensus 148 v~d~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~s~~-~d~~v~iw~~--~~~ 201 (224)
+||+++++.+..+..... .....+..++|+| ++++|++++ .|+.|++|++ .++
T Consensus 266 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 266 AWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK-NLPFVAFFVEATKCIIILEMSEKQK 342 (450)
T ss_dssp EEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS-SSSEEEEEETTCSEEEEEEECSSST
T ss_pred EEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC-CCCEEEEEECCCCeEEEEEeccCCC
Confidence 999999988776632110 1223456788888 688888887 8999999999 444
No 67
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.1e-32 Score=210.89 Aligned_cols=188 Identities=15% Similarity=0.158 Sum_probs=162.9
Q ss_pred eEEEEEeCCCcEEEEeCCCCce-----eeEE-ec-----cCCeeEEEEc----CCCCcE-EEEecCCCEEEEEecCC---
Q psy11351 8 KVLRVIGNDDHVISHDMASGDP-----IDFY-LH-----ERPVYGLSVD----PSQDAI-FASACDDGRVLLFDTRS--- 68 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~~-----~~~~-~~-----~~~v~~~~~~----~~~~~~-l~s~~~d~~i~iwd~~~--- 68 (224)
++|++++.||.|++||+.+++. ...+ .| ...|.+++|+ |++ ++ |++++.|+.|++||+++
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~ 160 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFAD 160 (397)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSS
T ss_pred cEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCcccc
Confidence 8999999999999999998875 5555 67 5999999999 998 78 99999999999999998
Q ss_pred ---cccce-----ee-------ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec---C---CCceeE
Q psy11351 69 ---REEAT-----EL-------AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG---S---CESCMS 127 (224)
Q Consensus 69 ---~~~~~-----~~-------~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~---~---~~~v~~ 127 (224)
++.+. .+ ..|...|.+++|+| ++ ++++++.||.|++||+++++....+.. | ...+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~ 238 (397)
T 1sq9_A 161 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRS 238 (397)
T ss_dssp HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEE
T ss_pred ccccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccce
Confidence 77666 66 34888999999999 77 999999999999999999988888887 8 999999
Q ss_pred EEEcCCCCeEeeeecC---CCcEEEECCCCCcceec-c-------------cCCcccceeeeEEEEeCCCCeEEEEcCCC
Q psy11351 128 IRFNKAGTQLLGLRRR---LPPVLYNTRSSSPVAQF-D-------------HEGYYNSCTMKSCCFAGTQDEYVVSGSDD 190 (224)
Q Consensus 128 ~~~~~~~~~l~~~~~d---~~v~v~d~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~l~s~~~d 190 (224)
++|+|++++|++++.| +.|++||+++++.+..+ . |...+. .++|+| ++++|++++.|
T Consensus 239 i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~~~~~-~~~~l~~~~~d 312 (397)
T 1sq9_A 239 VKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVM-----SLSFND-SGETLCSAGWD 312 (397)
T ss_dssp EEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEE-----EEEECS-SSSEEEEEETT
T ss_pred EEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEE-----EEEECC-CCCEEEEEeCC
Confidence 9999999999999999 99999999999888877 3 455444 467777 79999999999
Q ss_pred CeEEEEeCCCCCeE
Q psy11351 191 FVLYMWRVPRDDIY 204 (224)
Q Consensus 191 ~~v~iw~~~~~~~~ 204 (224)
+.|++||+.+++..
T Consensus 313 g~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 313 GKLRFWDVKTKERI 326 (397)
T ss_dssp SEEEEEETTTTEEE
T ss_pred CeEEEEEcCCCcee
Confidence 99999999998764
No 68
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5.9e-33 Score=211.44 Aligned_cols=188 Identities=13% Similarity=0.153 Sum_probs=159.8
Q ss_pred CCC-cceEEEEEeCCCcEEEEeCCCCceeeEE----eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeecc
Q psy11351 3 SGD-PIKVLRVIGNDDHVISHDMASGDPIDFY----LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAV 77 (224)
Q Consensus 3 ~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 77 (224)
..+ .+++|++++.||+|++||+.+++.+..+ +|...|.+++|+|++ ++|++++.|+.|++||+++++....+..
T Consensus 123 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 201 (366)
T 3k26_A 123 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKE 201 (366)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHH
T ss_pred ECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccce
Confidence 344 6789999999999999999999888776 699999999999998 8999999999999999998876554443
Q ss_pred ----------------------------CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCce--------------e
Q psy11351 78 ----------------------------NSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKE--------------V 115 (224)
Q Consensus 78 ----------------------------~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~--------------~ 115 (224)
|...|.+++|+ ++++++++.|+.|++||+++.+. .
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 278 (366)
T 3k26_A 202 SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTIL 278 (366)
T ss_dssp HHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEE
T ss_pred eEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchhee
Confidence 88999999998 46999999999999999987644 5
Q ss_pred eEeecCCCceeEEEEcCC--CCeEeeeecCCCcEEEECCCCCcce----ec-cc--CCcccceeeeEEEEeCCCCeEEEE
Q psy11351 116 LMQYGSCESCMSIRFNKA--GTQLLGLRRRLPPVLYNTRSSSPVA----QF-DH--EGYYNSCTMKSCCFAGTQDEYVVS 186 (224)
Q Consensus 116 ~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~v~d~~~~~~~~----~~-~~--~~~~~~~~~~~~~~~~~~~~~l~s 186 (224)
..+..|...|.+++|+|+ +++|++++.|+.|++||++++++.. .+ .| ... +..++|+| ++++|++
T Consensus 279 ~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~-~~~~l~s 352 (366)
T 3k26_A 279 GRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAA-----IRQTSFSR-DSSILIA 352 (366)
T ss_dssp EEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSC-----EEEEEECT-TSSEEEE
T ss_pred ccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCc-----eEEEEeCC-CCCeEEE
Confidence 556678899999999999 9999999999999999999887654 33 23 344 44477887 7999999
Q ss_pred cCCCCeEEEEeCCC
Q psy11351 187 GSDDFVLYMWRVPR 200 (224)
Q Consensus 187 ~~~d~~v~iw~~~~ 200 (224)
++.||.|++||+.+
T Consensus 353 ~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 353 VCDDASIWRWDRLR 366 (366)
T ss_dssp EETTSEEEEEEC--
T ss_pred EeCCCEEEEEEecC
Confidence 99999999999863
No 69
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.9e-32 Score=214.17 Aligned_cols=198 Identities=13% Similarity=0.176 Sum_probs=157.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCc-----------eeeEE-ecc------------CCeeEEEEcCCCC-cEEEEec
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGD-----------PIDFY-LHE------------RPVYGLSVDPSQD-AIFASAC 56 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~-----------~~~~~-~~~------------~~v~~~~~~~~~~-~~l~s~~ 56 (224)
+.++.+++|++|+.||.|+|||+.+++ ....+ +|. ..|++++|+|++. ..|++++
T Consensus 35 ~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s 114 (447)
T 3dw8_B 35 EFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLST 114 (447)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeC
Confidence 457788999999999999999999876 34444 787 8899999999863 4899999
Q ss_pred CCCEEEEEecCCcccc---------------------------------------ee-eccCCcCeEEEEEcCCCCCeEE
Q psy11351 57 DDGRVLLFDTRSREEA---------------------------------------TE-LAVNSGPFHAVMFNPVEARLVA 96 (224)
Q Consensus 57 ~d~~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~i~~~~~~~~~~~~l~ 96 (224)
.|++|++||+.+++.. .. ..+|...|.+++|+| ++++|+
T Consensus 115 ~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~ 193 (447)
T 3dw8_B 115 NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS-DYETYL 193 (447)
T ss_dssp CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT-TSSEEE
T ss_pred CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC-CCCEEE
Confidence 9999999999764431 12 357899999999999 889999
Q ss_pred EecCCCcEEEEecCCCceeeE--------eecCCCceeEEEEcCCC-CeEeeeecCCCcEEEECCCCCc----ceecc-c
Q psy11351 97 TANSKDGIALYDTRKPKEVLM--------QYGSCESCMSIRFNKAG-TQLLGLRRRLPPVLYNTRSSSP----VAQFD-H 162 (224)
Q Consensus 97 ~~~~dg~v~i~d~~~~~~~~~--------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~v~d~~~~~~----~~~~~-~ 162 (224)
+| .|+.|++||+++...... +..|...|.+++|+|++ ++|++++.|+.|++||+++++. ...+. +
T Consensus 194 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (447)
T 3dw8_B 194 SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEP 272 (447)
T ss_dssp EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccC
Confidence 98 799999999995443333 34689999999999998 9999999999999999998886 55553 3
Q ss_pred CCcccc-------eeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCC-CCe
Q psy11351 163 EGYYNS-------CTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPR-DDI 203 (224)
Q Consensus 163 ~~~~~~-------~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~-~~~ 203 (224)
...... ..+..++|+| ++++|++++. +.|++||+++ ++.
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~ 319 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRP 319 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSC
T ss_pred CCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccc
Confidence 321000 0244578888 7999999998 9999999987 544
No 70
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.8e-33 Score=213.89 Aligned_cols=188 Identities=9% Similarity=0.028 Sum_probs=148.7
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCc---eeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc---ccee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGD---PIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE---EATE 74 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~~ 74 (224)
+..+.+++|++++.|++|++||+.+++ ....+ +|...|++++|+|++ ++|++++.|+.|++||+++++ ....
T Consensus 62 ~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 140 (377)
T 3dwl_C 62 DWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWWVSKH 140 (377)
T ss_dssp EECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CCCCEE
T ss_pred EEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccceeeeE
Confidence 456678899999999999999999877 33333 899999999999998 899999999999999999887 3667
Q ss_pred ecc-CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCC------------------CceeeEeecCCCceeEEEEcCCCC
Q psy11351 75 LAV-NSGPFHAVMFNPVEARLVATANSKDGIALYDTRK------------------PKEVLMQYGSCESCMSIRFNKAGT 135 (224)
Q Consensus 75 ~~~-~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~ 135 (224)
+.. |...|.+++|+| ++.+|++++.|+.|++||++. ++....+ .|...|.+++|+|+++
T Consensus 141 ~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~ 218 (377)
T 3dwl_C 141 LKRPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN 218 (377)
T ss_dssp ECSSCCSCEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS
T ss_pred eecccCCCeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC
Confidence 777 999999999999 889999999999999999853 2233334 7899999999999999
Q ss_pred eEeeeecCCCcEEEECCCCCc----ceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCC
Q psy11351 136 QLLGLRRRLPPVLYNTRSSSP----VAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 136 ~l~~~~~d~~v~v~d~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~ 199 (224)
+|++++.|+.|++||+++++. +..+ .|...+.+ ++|+| ++.+|++++.++.+ +|+..
T Consensus 219 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-----~~~s~-~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 219 ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRS-----LLWAN-ESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEE-----EEEEE-TTEEEEEESSSSEE-EECCC
T ss_pred EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEE-----EEEcC-CCCEEEEEcCCcEE-EEEeC
Confidence 999999999999999999887 5555 56666555 55555 79999999877766 66655
No 71
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=7.9e-32 Score=210.33 Aligned_cols=189 Identities=17% Similarity=0.255 Sum_probs=159.9
Q ss_pred ceEEEEEeCCCcEEEEeCCC----------CceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccc----
Q psy11351 7 IKVLRVIGNDDHVISHDMAS----------GDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREE---- 71 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~----------~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~---- 71 (224)
+.++++++.||.|++||+.+ .++...+ +|...|++++|+|++..+|++|+.||.|++||++++..
T Consensus 141 ~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 220 (430)
T 2xyi_A 141 ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRV 220 (430)
T ss_dssp EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGE
T ss_pred CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCce
Confidence 67999999999999999986 4455555 89999999999999844999999999999999987432
Q ss_pred ---ceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCC---ceeeEeecCCCceeEEEEcCCCC-eEeeeecCC
Q psy11351 72 ---ATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKP---KEVLMQYGSCESCMSIRFNKAGT-QLLGLRRRL 144 (224)
Q Consensus 72 ---~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~ 144 (224)
...+..|...|.+++|+|.++.+|++++.||.|++||+++. +....+..|...|++++|+|++. ++++++.|+
T Consensus 221 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg 300 (430)
T 2xyi_A 221 IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK 300 (430)
T ss_dssp EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC
Confidence 45567899999999999977889999999999999999976 45566668999999999999987 588999999
Q ss_pred CcEEEECCC-CCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCC
Q psy11351 145 PPVLYNTRS-SSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 145 ~v~v~d~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~ 200 (224)
.|++||+++ ..++..+ .|.+.+. .++|+|.+..+|++++.|+.|++||+..
T Consensus 301 ~v~vwd~~~~~~~~~~~~~h~~~v~-----~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 301 TVALWDLRNLKLKLHSFESHKDEIF-----QVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEEEEETTCTTSCSEEEECCSSCEE-----EEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred eEEEEeCCCCCCCeEEeecCCCCEE-----EEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 999999998 4566666 4666554 4777885446899999999999999987
No 72
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-32 Score=218.01 Aligned_cols=193 Identities=8% Similarity=0.015 Sum_probs=148.3
Q ss_pred cceEEEEEeCCCcEEEEeCCCCcee----eEE-eccCCeeEEEEcCCC-----CcEEEEecCCCEEEEEecCCccc----
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPI----DFY-LHERPVYGLSVDPSQ-----DAIFASACDDGRVLLFDTRSREE---- 71 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~----~~~-~~~~~v~~~~~~~~~-----~~~l~s~~~d~~i~iwd~~~~~~---- 71 (224)
.++.+++++.|++|+|||+.+++.. ..+ .|.+.|.+++|+|++ ..+|++++.||+|++||+.+++.
T Consensus 172 ~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~ 251 (524)
T 2j04_B 172 HLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV 251 (524)
T ss_dssp ----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE
T ss_pred hhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc
Confidence 3455677788999999999887643 223 578899999999961 26999999999999999986642
Q ss_pred -------ceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCcee-eEeecCCCceeEE--EEcCCC-CeEeee
Q psy11351 72 -------ATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEV-LMQYGSCESCMSI--RFNKAG-TQLLGL 140 (224)
Q Consensus 72 -------~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~-~~~~~~~~~v~~~--~~~~~~-~~l~~~ 140 (224)
...+.+|...|.+++|++ + ..|++|+.||.|++||++++..+ ..+..|...|.++ .|+|++ .+|+++
T Consensus 252 ~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~ 329 (524)
T 2j04_B 252 FKMCEKPSLTLSLADSLITTFDFLS-P-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTV 329 (524)
T ss_dssp EECCCSCSEEECCTTTCEEEEEESS-S-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEE
T ss_pred ceeecCceEEEEcCCCCEEEEEecC-C-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEe
Confidence 236678999999999998 5 48999999999999999976443 4567899999999 578888 899999
Q ss_pred ecCCCcEEEECCCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 141 RRRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 141 ~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+.|++|++||+++++....+ .|.... .+..++|+| +++.+++++.|+.|++||++++...
T Consensus 330 S~D~tvklWD~~~~~~~~~~~~~~~~~---~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~ 390 (524)
T 2j04_B 330 AVDGYFYIFNPKDIATTKTTVSRFRGS---NLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAV 390 (524)
T ss_dssp ETTSEEEEECGGGHHHHCEEEEECSCC---SCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCC
T ss_pred ccCCeEEEEECCCCCcccccccccccC---cccceEeCC-CcCeEEEeCCCCcEEEEECcccccc
Confidence 99999999999988776665 332210 123367888 6888999999999999999998764
No 73
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-33 Score=232.86 Aligned_cols=198 Identities=10% Similarity=0.055 Sum_probs=167.4
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+|+++.+++||+|+.||+|+||+..+.+......|...|.+++|+| + ++|++++.|++|++||+++++.+..+. |..
T Consensus 23 lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~ 99 (902)
T 2oaj_A 23 AAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-G-IYLVVINAKDTVYVLSLYSQKVLTTVF-VPG 99 (902)
T ss_dssp EEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-T-TEEEEEETTCEEEEEETTTCSEEEEEE-CSS
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-C-CEEEEEECcCeEEEEECCCCcEEEEEc-CCC
Confidence 3567788999999999999999999887776668889999999999 7 699999999999999999998887775 668
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCcee-----------eEeecCCCceeEEEEcCC-CCeEeeeecCCCcEE
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEV-----------LMQYGSCESCMSIRFNKA-GTQLLGLRRRLPPVL 148 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~-----------~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~v 148 (224)
.|++++|+| +++++++|+.||.|++||+++++.. ....+|.+.|.+++|+|+ +..+++++.|+.| +
T Consensus 100 ~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-l 177 (902)
T 2oaj_A 100 KITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-T 177 (902)
T ss_dssp CEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-E
T ss_pred CEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-E
Confidence 899999999 8999999999999999999987643 122458899999999996 5789999999999 9
Q ss_pred EECCCCCcceecccC---Cc-----------ccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 149 YNTRSSSPVAQFDHE---GY-----------YNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 149 ~d~~~~~~~~~~~~~---~~-----------~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
||+++++.+..+... +. -..-.+..++|+| ++.+|++|+.|+.|++||+++++..
T Consensus 178 Wd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-dg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 178 YSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-NSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp EETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-TSSEEEEEETTCCEEEEETTTCCEE
T ss_pred EECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCCcEE
Confidence 999998887776321 00 0012355688888 6999999999999999999998765
No 74
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.8e-32 Score=212.51 Aligned_cols=192 Identities=19% Similarity=0.276 Sum_probs=156.5
Q ss_pred eEEEEEeCCCcEEEEeCCCCcee---------------------------------------eE--EeccCCeeEEEEcC
Q psy11351 8 KVLRVIGNDDHVISHDMASGDPI---------------------------------------DF--YLHERPVYGLSVDP 46 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~~~---------------------------------------~~--~~~~~~v~~~~~~~ 46 (224)
.+|++++.|++|++||+.+++.. .. .+|...|++++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 68999999999999998764431 12 27999999999999
Q ss_pred CCCcEEEEecCCCEEEEEecCCc-ccce-------eeccCCcCeEEEEEcCCCC-CeEEEecCCCcEEEEecCCCce---
Q psy11351 47 SQDAIFASACDDGRVLLFDTRSR-EEAT-------ELAVNSGPFHAVMFNPVEA-RLVATANSKDGIALYDTRKPKE--- 114 (224)
Q Consensus 47 ~~~~~l~s~~~d~~i~iwd~~~~-~~~~-------~~~~~~~~i~~~~~~~~~~-~~l~~~~~dg~v~i~d~~~~~~--- 114 (224)
++ ++|++| .|+.|++||+++. +... .+..|...|.+++|+| ++ .+|++|+.||.|++||+++++.
T Consensus 188 ~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 188 DY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp TS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred CC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 98 899998 7999999999843 3333 3668999999999999 65 9999999999999999998875
Q ss_pred -eeEeecCCC------------ceeEEEEcCCCCeEeeeecCCCcEEEECCC-CCcceec-ccCCcccce----------
Q psy11351 115 -VLMQYGSCE------------SCMSIRFNKAGTQLLGLRRRLPPVLYNTRS-SSPVAQF-DHEGYYNSC---------- 169 (224)
Q Consensus 115 -~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~-~~~~~~~-~~~~~~~~~---------- 169 (224)
...+..|.. .|.+++|+|++++|++++. +.|++||+++ ++++..+ .|......+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 566666665 8999999999999999998 9999999997 7777777 343222110
Q ss_pred eeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 170 TMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 170 ~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
....++|+| ++.+|++|+.||.|++||+.+++..
T Consensus 344 ~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 344 DKFECCWNG-SDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp CCCCEEECT-TSSEEEEECSTTEEEEEETTTCCEE
T ss_pred cceEEEECC-CCCEEEEeccCCEEEEEEcCCCcce
Confidence 012378888 6999999999999999999998774
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.5e-31 Score=223.24 Aligned_cols=197 Identities=13% Similarity=0.147 Sum_probs=174.4
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCC
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNS 79 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 79 (224)
|+.++.++++++++.||.|+|||+.+++.+..+ +|...|++++|+|++ ++|++++.||.|++||+.+++.+..+..|.
T Consensus 19 i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 97 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGEKVVDFEAHP 97 (814)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEecCC
Confidence 356778899999999999999999999888877 799999999999998 899999999999999999999999999999
Q ss_pred cCeEEEEEcCCCCCeEEEecCCCcEEEEecCCC-ceeeEeecCCCceeEEEEcC-CCCeEeeeecCCCcEEEECCCCCcc
Q psy11351 80 GPFHAVMFNPVEARLVATANSKDGIALYDTRKP-KEVLMQYGSCESCMSIRFNK-AGTQLLGLRRRLPPVLYNTRSSSPV 157 (224)
Q Consensus 80 ~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~v~d~~~~~~~ 157 (224)
..|.+++|+| ++.++++++.||.|++||++++ .....+..|...|.+++|+| +++.+++++.|+.|++||+++++..
T Consensus 98 ~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~ 176 (814)
T 3mkq_A 98 DYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (814)
T ss_dssp SCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCS
T ss_pred CCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 9999999999 8899999999999999999987 45566678999999999999 8899999999999999999988877
Q ss_pred eecc--cCCcccceeeeEEEEeCC-CCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 158 AQFD--HEGYYNSCTMKSCCFAGT-QDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 158 ~~~~--~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
..+. +...+.. ++|+|. ++.++++++.||.|++||+.+++..
T Consensus 177 ~~~~~~~~~~v~~-----~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 221 (814)
T 3mkq_A 177 FTLTTGQERGVNY-----VDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (814)
T ss_dssp EEEECCCTTCCCE-----EEECCSTTCCEEEEECTTSEEEEEETTTTEEE
T ss_pred eEEecCCCCCEEE-----EEEEECCCCCEEEEEeCCCEEEEEECCCCcEE
Confidence 7762 2244443 666662 5789999999999999999988764
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.7e-31 Score=208.86 Aligned_cols=184 Identities=12% Similarity=0.173 Sum_probs=162.1
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcC--CCCcEEEEecCCCEEEEEecCCccc--------------
Q psy11351 9 VLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDP--SQDAIFASACDDGRVLLFDTRSREE-------------- 71 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~-------------- 71 (224)
++++|+.||+|++||+++++.+..+ +|...|.+++|++ ++ +++++|+.|++|++||+++++.
T Consensus 175 ~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 253 (464)
T 3v7d_B 175 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVF 253 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEE
T ss_pred EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEe
Confidence 8999999999999999999988887 7999999999984 55 8999999999999999987653
Q ss_pred ---------ceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec
Q psy11351 72 ---------ATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR 142 (224)
Q Consensus 72 ---------~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 142 (224)
...+.+|...+.++. + ++.++++++.||.|++||+++++....+..|...|.+++|+|+++++++++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~v~~~~--~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~ 330 (464)
T 3v7d_B 254 HTPEENPYFVGVLRGHMASVRTVS--G-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM 330 (464)
T ss_dssp SCGGGCTTEEEEECCCSSCEEEEE--E-ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET
T ss_pred eccCCCeEEEEEccCccceEEEEc--C-CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC
Confidence 335667888888874 5 6789999999999999999999888888899999999999999999999999
Q ss_pred CCCcEEEECCCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 143 RLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 143 d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
|+.|++||+++++++..+ .|...+.. +.| ++.+|++++.||.|++||+.+++..
T Consensus 331 dg~i~vwd~~~~~~~~~~~~h~~~v~~-----~~~---~~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 331 DTTIRIWDLENGELMYTLQGHTALVGL-----LRL---SDKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEE-----EEE---CSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCcEEEEECCCCcEEEEEeCCCCcEEE-----EEE---cCCEEEEEeCCCcEEEEECCCCcee
Confidence 999999999999998888 56666654 444 4689999999999999999988764
No 77
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-32 Score=212.30 Aligned_cols=199 Identities=12% Similarity=0.183 Sum_probs=161.5
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCC---CCceeeEE-e------------ccCCeeEEE--EcCCCCcEEEEecCCCEEEE
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMA---SGDPIDFY-L------------HERPVYGLS--VDPSQDAIFASACDDGRVLL 63 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~-~------------~~~~v~~~~--~~~~~~~~l~s~~~d~~i~i 63 (224)
+..+.+++|++|+.||+|++||+. +++..... . +...+.++. +++++ ++|++++.|+.|++
T Consensus 118 ~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~i 196 (437)
T 3gre_A 118 TMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRVII 196 (437)
T ss_dssp EECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEEEE
T ss_pred EEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeEEE
Confidence 455678899999999999999994 55544433 1 455666666 55777 89999999999999
Q ss_pred EecCCcccceeecc--CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee-cCCCceeEEEEc----CCCCe
Q psy11351 64 FDTRSREEATELAV--NSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY-GSCESCMSIRFN----KAGTQ 136 (224)
Q Consensus 64 wd~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~-~~~~~v~~~~~~----~~~~~ 136 (224)
||+++++.+..+.. |...|.+++|+| ++.+|++|+.||.|++||+++++....+. .|...|.+++|+ |++.+
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~ 275 (437)
T 3gre_A 197 FDIRTLERLQIIENSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVI 275 (437)
T ss_dssp EETTTCCEEEEEECCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEE
T ss_pred EeCCCCeeeEEEccCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccE
Confidence 99999999988887 889999999999 89999999999999999999987777665 678899999655 56789
Q ss_pred EeeeecCCCcEEEECCCCCcceec-ccCCcccce---------------------eeeEEEEeCCCCeEEEEcCCCCeEE
Q psy11351 137 LLGLRRRLPPVLYNTRSSSPVAQF-DHEGYYNSC---------------------TMKSCCFAGTQDEYVVSGSDDFVLY 194 (224)
Q Consensus 137 l~~~~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~---------------------~~~~~~~~~~~~~~l~s~~~d~~v~ 194 (224)
|++++.|+.|++||+++++.+..+ .+...+..+ .+..++|+ ++++|++|+.|+.|+
T Consensus 276 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~i~ 353 (437)
T 3gre_A 276 VVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEATSSIV 353 (437)
T ss_dssp EEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGTEEE
T ss_pred EEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEEEecCCCCeEE
Confidence 999999999999999988877666 333222211 13346777 468999999999999
Q ss_pred EEeCCCCCeE
Q psy11351 195 MWRVPRDDIY 204 (224)
Q Consensus 195 iw~~~~~~~~ 204 (224)
+||+.+++..
T Consensus 354 ~wd~~~~~~~ 363 (437)
T 3gre_A 354 MFSLNELSSS 363 (437)
T ss_dssp EEETTCGGGC
T ss_pred EEECCCcccc
Confidence 9999998764
No 78
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.7e-31 Score=231.64 Aligned_cols=201 Identities=15% Similarity=0.211 Sum_probs=173.7
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+.+++++++++|+.||+|++||+.+++.+..+ +|...|.+++|+|++ +++++++.|++|++||+.+++.+..+.+|..
T Consensus 622 ~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~ 700 (1249)
T 3sfz_A 622 CFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDD-SYIATCSADKKVKIWDSATGKLVHTYDEHSE 700 (1249)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEECCCCceEEEEcCCCC
Confidence 56778899999999999999999999988877 899999999999998 8999999999999999999999999999999
Q ss_pred CeEEEEEcCC-CCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCccee
Q psy11351 81 PFHAVMFNPV-EARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQ 159 (224)
Q Consensus 81 ~i~~~~~~~~-~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~ 159 (224)
.|.+++|+|. +..++++|+.|+.|++||+++++....+.+|...|.+++|+|+++++++++.|+.|++||+++++....
T Consensus 701 ~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~ 780 (1249)
T 3sfz_A 701 QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKS 780 (1249)
T ss_dssp CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEE
T ss_pred cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccce
Confidence 9999999984 345889999999999999999988888889999999999999999999999999999999987654333
Q ss_pred cccCC--------------cc-------------------------------------cceeeeEEEEeCCCCeEEEEcC
Q psy11351 160 FDHEG--------------YY-------------------------------------NSCTMKSCCFAGTQDEYVVSGS 188 (224)
Q Consensus 160 ~~~~~--------------~~-------------------------------------~~~~~~~~~~~~~~~~~l~s~~ 188 (224)
+.... .+ ..-.+..++|+| ++.++++++
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~ 859 (1249)
T 3sfz_A 781 INVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP-YDHLAVIAL 859 (1249)
T ss_dssp EECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS-STTEEEEEC
T ss_pred ecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC-CCCEEEEEe
Confidence 21000 00 011234577888 689999999
Q ss_pred CCCeEEEEeCCCCCeE
Q psy11351 189 DDFVLYMWRVPRDDIY 204 (224)
Q Consensus 189 ~d~~v~iw~~~~~~~~ 204 (224)
.|+.|++||+.+++..
T Consensus 860 ~dg~v~vwd~~~~~~~ 875 (1249)
T 3sfz_A 860 SQYCVELWNIDSRLKV 875 (1249)
T ss_dssp SSSCEEEEETTTTEEE
T ss_pred CCCeEEEEEcCCCcee
Confidence 9999999999988664
No 79
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.6e-31 Score=208.64 Aligned_cols=194 Identities=14% Similarity=0.263 Sum_probs=158.4
Q ss_pred CCCcce-EEEEEeCCCcEEEEeCCCCce-------eeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc---c
Q psy11351 3 SGDPIK-VLRVIGNDDHVISHDMASGDP-------IDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR---E 70 (224)
Q Consensus 3 ~~~~~~-~l~~~~~dg~i~iwd~~~~~~-------~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~ 70 (224)
.+..+. +|++|+.||+|++||+.++.. ...+ +|...|.+++|+|++..+|++++.|+.|++||++++ +
T Consensus 189 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~ 268 (430)
T 2xyi_A 189 WNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSK 268 (430)
T ss_dssp ECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSS
T ss_pred eCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCc
Confidence 344555 999999999999999987432 2333 799999999999965589999999999999999987 4
Q ss_pred cceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCC-ceeeEeecCCCceeEEEEcCCCC-eEeeeecCCCcEE
Q psy11351 71 EATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKP-KEVLMQYGSCESCMSIRFNKAGT-QLLGLRRRLPPVL 148 (224)
Q Consensus 71 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~v 148 (224)
.+..+..|...|++++|+|++..++++|+.||.|++||+++. ..+..+..|...|.+++|+|+++ +|++++.|+.|++
T Consensus 269 ~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~i 348 (430)
T 2xyi_A 269 PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 348 (430)
T ss_dssp CSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEE
T ss_pred ceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEE
Confidence 677778999999999999954458999999999999999984 45667778999999999999986 6889999999999
Q ss_pred EECCCC--------------Ccceec-ccCCcccceeeeEEEEeCCCCe-EEEEcCCCCeEEEEeCCCCC
Q psy11351 149 YNTRSS--------------SPVAQF-DHEGYYNSCTMKSCCFAGTQDE-YVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 149 ~d~~~~--------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~v~iw~~~~~~ 202 (224)
||++.. +.+..+ .|...+. .++|+| ++. +|++++.|+.|++|++....
T Consensus 349 wd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-----~~~~~p-~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 349 WDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS-----DFSWNP-NEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp EEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEE-----EEEECS-SSTTEEEEEETTSEEEEEEECHHH
T ss_pred EeCCCCccccCccccccCCcceEEEcCCCCCCce-----EEEECC-CCCCEEEEEECCCCEEEeEccccc
Confidence 999862 223333 3444444 477777 566 89999999999999997653
No 80
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.4e-31 Score=198.89 Aligned_cols=195 Identities=14% Similarity=0.213 Sum_probs=166.1
Q ss_pred CCCCc-ceEEEEEeCCCcEEEEeCCCCce-----eeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccccee
Q psy11351 2 ASGDP-IKVLRVIGNDDHVISHDMASGDP-----IDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATE 74 (224)
Q Consensus 2 a~~~~-~~~l~~~~~dg~i~iwd~~~~~~-----~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 74 (224)
++++. +++|+||+.|++|+|||+.+.+. ...+ +|...|.+++|+|++ ++|++++.|+.|++|+.........
T Consensus 45 ~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~~d~~i~~~~~~~~~~~~~ 123 (340)
T 4aow_A 45 ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG-QFALSGSWDGTLRLWDLTTGTTTRR 123 (340)
T ss_dssp EECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC-CEEEEEcccccceEEeecccceeee
Confidence 34433 67999999999999999987542 3334 799999999999998 8999999999999999999888888
Q ss_pred eccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeE-eecCCCceeEEEEcCCC--CeEeeeecCCCcEEEEC
Q psy11351 75 LAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLM-QYGSCESCMSIRFNKAG--TQLLGLRRRLPPVLYNT 151 (224)
Q Consensus 75 ~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~v~d~ 151 (224)
...+...+..+.+++ .+.++++++.|+.+++||+........ ...|...+..++|++++ .++++++.|+.|++||+
T Consensus 124 ~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~ 202 (340)
T 4aow_A 124 FVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 202 (340)
T ss_dssp EECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEET
T ss_pred ecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEEC
Confidence 888888999999999 889999999999999999987654333 34688999999999875 46788999999999999
Q ss_pred CCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 152 RSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 152 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
++++.+..+ .|.+.+.+ ++|+| ++++|++|+.|+.|++||+++.+..
T Consensus 203 ~~~~~~~~~~~h~~~v~~-----~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 203 ANCKLKTNHIGHTGYLNT-----VTVSP-DGSLCASGGKDGQAMLWDLNEGKHL 250 (340)
T ss_dssp TTTEEEEEECCCSSCEEE-----EEECT-TSSEEEEEETTCEEEEEETTTTEEE
T ss_pred CCCceeeEecCCCCcEEE-----EEECC-CCCEEEEEeCCCeEEEEEeccCcee
Confidence 999888887 57776655 66677 7999999999999999999998764
No 81
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6e-32 Score=206.50 Aligned_cols=190 Identities=11% Similarity=0.107 Sum_probs=163.0
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE---eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccc----cee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY---LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREE----ATE 74 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----~~~ 74 (224)
+..+.+++|++++.||.|++||+++++..... .|...|.+++|+|++ ++|++++.|+.|++||++.++. ...
T Consensus 59 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~ 137 (372)
T 1k8k_C 59 DWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHI 137 (372)
T ss_dssp EEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeee
Confidence 34567889999999999999999988754433 789999999999998 8999999999999999988763 223
Q ss_pred eccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecC------------------CCceeeEeecCCCceeEEEEcCCCCe
Q psy11351 75 LAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTR------------------KPKEVLMQYGSCESCMSIRFNKAGTQ 136 (224)
Q Consensus 75 ~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~ 136 (224)
...|...|.+++|+| ++.++++++.||.|++||++ .++....+..|...+.+++|+|++++
T Consensus 138 ~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 216 (372)
T 1k8k_C 138 KKPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR 216 (372)
T ss_dssp CTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSE
T ss_pred ecccCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCE
Confidence 367889999999999 88999999999999999964 55666667789999999999999999
Q ss_pred EeeeecCCCcEEEECCCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCC
Q psy11351 137 LLGLRRRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 137 l~~~~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~ 200 (224)
|++++.|+.|++||+++++++..+ .|...+.+ ++|+| ++.++++| .|+.|++|++.+
T Consensus 217 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~-----~~~~~-~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 217 VAWVSHDSTVCLADADKKMAVATLASETLPLLA-----VTFIT-ESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEETTTEEEEEEGGGTTEEEEEECSSCCEEE-----EEEEE-TTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEeCCCEEEEEECCCCceeEEEccCCCCeEE-----EEEec-CCCEEEEE-eCCeEEEEEccC
Confidence 999999999999999999988888 45555555 55565 78888888 899999999988
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.1e-31 Score=204.72 Aligned_cols=192 Identities=17% Similarity=0.163 Sum_probs=155.9
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEE---eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCe
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFY---LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPF 82 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i 82 (224)
.+++|++++.|++|++||+.+....... +|...|.+++|+|++ ++|++++.|+.|++||+ +++.+..+..|...|
T Consensus 130 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v 207 (383)
T 3ei3_B 130 NTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKV 207 (383)
T ss_dssp EEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEET-TSCEEEEEECSSSCE
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEEC-CCCEEEEeccCCCcE
Confidence 5689999999999999999974444333 345889999999998 89999999999999999 467788889999999
Q ss_pred EEEEEcCCCCC-eEEEecCCCcEEEEecCC----CceeeEeecCCCceeEEEEcC-CCCeEeeeecCCCcEEEECCCCCc
Q psy11351 83 HAVMFNPVEAR-LVATANSKDGIALYDTRK----PKEVLMQYGSCESCMSIRFNK-AGTQLLGLRRRLPPVLYNTRSSSP 156 (224)
Q Consensus 83 ~~~~~~~~~~~-~l~~~~~dg~v~i~d~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~v~d~~~~~~ 156 (224)
.+++|+| ++. ++++++.|+.|++||+++ .... ....|...|.+++|+| ++++|++++.|+.|++||+++++.
T Consensus 208 ~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 208 THAEFNP-RCDWLMATSSVDATVKLWDLRNIKDKNSYI-AEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEEEECS-SCTTEEEEEETTSEEEEEEGGGCCSTTCEE-EEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred EEEEECC-CCCCEEEEEeCCCEEEEEeCCCCCcccceE-EEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 9999999 666 999999999999999997 3333 3347999999999999 999999999999999999998877
Q ss_pred ceec-ccC-------Ccccc-----eeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 157 VAQF-DHE-------GYYNS-----CTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 157 ~~~~-~~~-------~~~~~-----~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
...+ .|. ..+.. -....++|+| ++.+ +++.|+.|++||+.+++..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~-dg~~--s~s~d~~i~iwd~~~~~~~ 343 (383)
T 3ei3_B 286 PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYP-DDQL--LLNDKRTIDIYDANSGGLV 343 (383)
T ss_dssp CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBC-CTTT--CTTCCCCEEEEETTTCCEE
T ss_pred ccccccccccccccccceEEeccCCCCceEEEecC-Cccc--ccCCCCeEEEEecCCCcee
Confidence 6665 232 11110 0112255555 4555 7889999999999998875
No 83
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=207.70 Aligned_cols=191 Identities=11% Similarity=0.124 Sum_probs=165.6
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccce-------
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT------- 73 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~------- 73 (224)
+.++++++|++++.||.|++|| .+++.+..+ .|...|.+++|+|++ ++|++++.|+.|++||+++++.+.
T Consensus 115 ~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 192 (425)
T 1r5m_A 115 AWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDG-THIISMDVENVTILWNVISGTVMQHFELKET 192 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTEEEEEECCC--
T ss_pred EEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCC-CEEEEEecCCeEEEEECCCCcEEEEeecccc
Confidence 4566789999999999999999 556666666 799999999999998 899999999999999997654322
Q ss_pred -------------------------------------------------eeccCCcCeEEEEEcCCCCCeEEEecCCCcE
Q psy11351 74 -------------------------------------------------ELAVNSGPFHAVMFNPVEARLVATANSKDGI 104 (224)
Q Consensus 74 -------------------------------------------------~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v 104 (224)
.+..|...|.+++|+| ++.++++++.|+.|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i 271 (425)
T 1r5m_A 193 GGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND-TNKLLLSASDDGTL 271 (425)
T ss_dssp -------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET-TTTEEEEEETTSCE
T ss_pred CccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC-CCCEEEEEcCCCEE
Confidence 3346778899999999 88999999999999
Q ss_pred EEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec-ccCCcccceeeeEEEEeCCCCeE
Q psy11351 105 ALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEY 183 (224)
Q Consensus 105 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 183 (224)
++||+++++....+..|...+.+++|+|++ ++++++.|+.|++||+++++.+..+ .|...+. .++|+| ++++
T Consensus 272 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~-----~~~~s~-~~~~ 344 (425)
T 1r5m_A 272 RIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIF-----AGRISQ-DGQK 344 (425)
T ss_dssp EEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEE-----EEEECT-TSSE
T ss_pred EEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEE-----EEEEcC-CCCE
Confidence 999999988888888899999999999999 9999999999999999999888777 4555544 467777 7999
Q ss_pred EEEcCCCCeEEEEeCCCCC
Q psy11351 184 VVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 184 l~s~~~d~~v~iw~~~~~~ 202 (224)
|++++.||.|++||+.+++
T Consensus 345 l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 345 YAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEETTSCEEEEECHHHH
T ss_pred EEEEECCCeEEEEECCCCc
Confidence 9999999999999998876
No 84
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6.6e-31 Score=205.35 Aligned_cols=183 Identities=17% Similarity=0.240 Sum_probs=162.6
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEE
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHA 84 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~ 84 (224)
+++++++|+.||+|++||+.+++....+ +|...|.+++| ++ ++|++|+.||+|++||+++++.+..+..|...|.+
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 218 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DE-RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH 218 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CC-CEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEE
Confidence 5679999999999999999999988888 89999999999 45 79999999999999999999999999999999999
Q ss_pred EEEcCCCCCeEEEecCCCcEEEEecCCCcee---eEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec-
Q psy11351 85 VMFNPVEARLVATANSKDGIALYDTRKPKEV---LMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF- 160 (224)
Q Consensus 85 ~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~- 160 (224)
++|++ .++++|+.||.|++||+++++.. ..+.+|...|.+++| +++++++++.|+.|++||+++++.+..+
T Consensus 219 l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 293 (435)
T 1p22_A 219 LRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN 293 (435)
T ss_dssp EECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEc
Confidence 99975 49999999999999999987654 455679999999999 7799999999999999999999988888
Q ss_pred ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 161 DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
.|...+.+ +.+ ++.++++|+.||.|++||+++++..
T Consensus 294 ~~~~~v~~-----~~~---~~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 294 GHKRGIAC-----LQY---RDRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp CCSSCEEE-----EEE---ETTEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCCcEEE-----EEe---CCCEEEEEeCCCeEEEEECCCCCEE
Confidence 46666554 333 4679999999999999999998775
No 85
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.6e-31 Score=201.83 Aligned_cols=196 Identities=13% Similarity=0.142 Sum_probs=158.7
Q ss_pred CCcceEEEEEeCCCcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCC-cEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 4 GDPIKVLRVIGNDDHVISHDMASGDPIDFY--LHERPVYGLSVDPSQD-AIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 4 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
...++++++++.|+.+++||.......... +|...+..++|++++. .++++++.|+.|++||+++++.+..+.+|..
T Consensus 137 ~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~ 216 (340)
T 4aow_A 137 SSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG 216 (340)
T ss_dssp CTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred eecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCC
Confidence 455678999999999999999876554443 7899999999998753 4788999999999999999999999999999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 160 (224)
.|.+++|+| ++++|++|+.||.|++||+++.+.+..+. +...+.++.|+|++.+ ++++.|+.|++||++++..+..+
T Consensus 217 ~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~~~~ 293 (340)
T 4aow_A 217 YLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLD-GGDIINALCFSPNRYW-LCAATGPSIKIWDLEGKIIVDEL 293 (340)
T ss_dssp CEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEE-CSSCEEEEEECSSSSE-EEEEETTEEEEEETTTTEEEEEE
T ss_pred cEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeec-CCceEEeeecCCCCce-eeccCCCEEEEEECCCCeEEEec
Confidence 999999999 89999999999999999999987666555 4578999999998755 55667999999999987666554
Q ss_pred ccC-----CcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 161 DHE-----GYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 161 ~~~-----~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
... .......+..++|+| ++++|++|+.||.|++||+.+|.+
T Consensus 294 ~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 294 KQEVISTSSKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp CCC-------CCCCCEEEEEECT-TSSEEEEEETTSCEEEEEEEC---
T ss_pred cccceeeeccCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEeCCCcCC
Confidence 210 001112244578888 799999999999999999998853
No 86
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=203.58 Aligned_cols=196 Identities=11% Similarity=0.057 Sum_probs=160.5
Q ss_pred CCCCcc-eEEEEEeC---CCcEEEEeCCCCceeeEE--eccCCeeEEEEcCCC--CcEEEEecCCCEEEEEecCCcc-cc
Q psy11351 2 ASGDPI-KVLRVIGN---DDHVISHDMASGDPIDFY--LHERPVYGLSVDPSQ--DAIFASACDDGRVLLFDTRSRE-EA 72 (224)
Q Consensus 2 a~~~~~-~~l~~~~~---dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~~-~~ 72 (224)
+..+.+ .++++|+. ||+|++||+.+++..... +|...|++++|+|++ +++|++|+.|+.|++||+++++ .+
T Consensus 25 ~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 104 (357)
T 3i2n_A 25 KWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPV 104 (357)
T ss_dssp EECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCS
T ss_pred EEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccE
Confidence 345555 45667766 999999999998875443 899999999999983 2799999999999999999988 88
Q ss_pred eeeccCCcCeEEEEE------cCCCCCeEEEecCCCcEEEEecCCCc-eeeEeecCCC----ceeEEE----EcCCCCeE
Q psy11351 73 TELAVNSGPFHAVMF------NPVEARLVATANSKDGIALYDTRKPK-EVLMQYGSCE----SCMSIR----FNKAGTQL 137 (224)
Q Consensus 73 ~~~~~~~~~i~~~~~------~~~~~~~l~~~~~dg~v~i~d~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~l 137 (224)
..+.+|...|.+++| +| ++++|++++.||.|++||+++++ ....+..+.+ .+.+++ |+|+++++
T Consensus 105 ~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l 183 (357)
T 3i2n_A 105 YSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVV 183 (357)
T ss_dssp EEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEE
T ss_pred EEEEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEE
Confidence 889999999999954 67 78899999999999999999876 4555544433 788888 78899999
Q ss_pred eeeecCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCC--CCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 138 LGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGT--QDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 138 ~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
++++.|+.|++||+++++......+...+. .++|+|. ++.+|++++.||.|++||+++++.
T Consensus 184 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~-----~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 246 (357)
T 3i2n_A 184 CAGYDNGDIKLFDLRNMALRWETNIKNGVC-----SLEFDRKDISMNKLVATSLEGKFHVFDMRTQHP 246 (357)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCEE-----EEEESCSSSSCCEEEEEESTTEEEEEEEEEEET
T ss_pred EEEccCCeEEEEECccCceeeecCCCCceE-----EEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCc
Confidence 999999999999999988766656666544 4778873 478999999999999999987654
No 87
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-30 Score=198.37 Aligned_cols=195 Identities=12% Similarity=0.170 Sum_probs=170.2
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCC-----CEEEEEecCCccc-----
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDD-----GRVLLFDTRSREE----- 71 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~----- 71 (224)
+....+++|++++.||+|++||+.+++.+..+.+...+.+++|+|++ +++++++.+ +.|++||++.+..
T Consensus 81 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~ 159 (369)
T 3zwl_B 81 DVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHELT 159 (369)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceeec
Confidence 44567889999999999999999999999888899999999999998 799999988 9999999987643
Q ss_pred ------ceeeccCCc--CeEEEEEcCCCCCeEEEecCCCcEEEEecCC-CceeeEeecCCCceeEEEEcCCCCeEeeeec
Q psy11351 72 ------ATELAVNSG--PFHAVMFNPVEARLVATANSKDGIALYDTRK-PKEVLMQYGSCESCMSIRFNKAGTQLLGLRR 142 (224)
Q Consensus 72 ------~~~~~~~~~--~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 142 (224)
...+..|.. .+.+++|+| +++++++++.||.|++||+++ .+....+..|...|.+++|+|++++|++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 160 KVSEEPIHKIITHEGLDAATVAGWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp EECSSCSEEEECCTTCCCEEEEEECG-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred ccccceeeeccCCcCccceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecC
Confidence 334445555 899999999 889999999999999999998 6667777789999999999999999999999
Q ss_pred CCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCC--------------eEEEEeCCCCCeE
Q psy11351 143 RLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDF--------------VLYMWRVPRDDIY 204 (224)
Q Consensus 143 d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~--------------~v~iw~~~~~~~~ 204 (224)
|+.|++||+++++.+..+.+...+. .++|+| ++.++++++.++ .+++||+.+++..
T Consensus 239 d~~i~v~d~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 308 (369)
T 3zwl_B 239 DTNSFLVDVSTLQVLKKYETDCPLN-----TAVITP-LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI 308 (369)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCEE-----EEEECS-SSSEEEEEECCC-------------CEEEEEETTTCCEE
T ss_pred CceEEEEECCCCceeeeecCCCCce-----eEEecC-CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch
Confidence 9999999999999888886555544 466777 789999998888 8999999998775
No 88
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.2e-31 Score=203.40 Aligned_cols=200 Identities=16% Similarity=0.245 Sum_probs=164.3
Q ss_pred CCCC-cceEEEEEeCCCcEEEEeCCCCceeeEE--------------eccCCeeEEEEcCCCCcEEEEecCCCEEEEEec
Q psy11351 2 ASGD-PIKVLRVIGNDDHVISHDMASGDPIDFY--------------LHERPVYGLSVDPSQDAIFASACDDGRVLLFDT 66 (224)
Q Consensus 2 a~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 66 (224)
+.++ .+++|++|+.||.|++||+.+++....+ +|...|.+++|+|++.++|++++.|+.|++||+
T Consensus 50 ~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 129 (408)
T 4a11_B 50 DIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDT 129 (408)
T ss_dssp EECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEET
T ss_pred EEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeC
Confidence 4456 7899999999999999999988765544 299999999999955489999999999999999
Q ss_pred CCcccceeeccCCcCeEEEEEcCCC--CCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCe-EeeeecC
Q psy11351 67 RSREEATELAVNSGPFHAVMFNPVE--ARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQ-LLGLRRR 143 (224)
Q Consensus 67 ~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d 143 (224)
++++....+. +...+.++.++|.. +.++++++.++.|++||+++++....+..|...|.+++|+|++++ +++++.|
T Consensus 130 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~d 208 (408)
T 4a11_B 130 NTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASAD 208 (408)
T ss_dssp TTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETT
T ss_pred CCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCC
Confidence 9988777765 67789999999842 339999999999999999999888888889999999999999985 8899999
Q ss_pred CCcEEEECCCCC-cceecc-cCC----------cccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 144 LPPVLYNTRSSS-PVAQFD-HEG----------YYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 144 ~~v~v~d~~~~~-~~~~~~-~~~----------~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
+.|++||++++. .+..+. +.+ ......+..++|+| ++++|++++.|+.|++||+.+++.
T Consensus 209 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 209 SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCB
T ss_pred CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCCEEEEecCCCeEEEEECCCCcc
Confidence 999999998765 222221 000 01112244578888 799999999999999999998765
No 89
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-32 Score=224.27 Aligned_cols=195 Identities=17% Similarity=0.247 Sum_probs=165.3
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCC--CceeeEE-eccCCeeEEEEcCC--CCcEEEEecCCCEEEEEecCCcc--cce
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMAS--GDPIDFY-LHERPVYGLSVDPS--QDAIFASACDDGRVLLFDTRSRE--EAT 73 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~-~~~~~v~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~--~~~ 73 (224)
|+.+.+++++++|+.||+|++||+.+ ++....+ +|.+.|++++|+|+ + ++|++|+.||.|++||+++++ ...
T Consensus 15 l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~~~~~~~~ 93 (753)
T 3jro_A 15 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEENGRWSQIA 93 (753)
T ss_dssp ECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred EEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEECCCCcccccc
Confidence 35677889999999999999999984 4455555 89999999999987 6 899999999999999999886 667
Q ss_pred eeccCCcCeEEEEEcCCC--CCeEEEecCCCcEEEEecCCCc--eeeEeecCCCceeEEEEcC-------------CCCe
Q psy11351 74 ELAVNSGPFHAVMFNPVE--ARLVATANSKDGIALYDTRKPK--EVLMQYGSCESCMSIRFNK-------------AGTQ 136 (224)
Q Consensus 74 ~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~-------------~~~~ 136 (224)
.+..|...|.+++|+| + +.++++|+.||.|++||+++.. ....+..|...|.+++|+| ++.+
T Consensus 94 ~~~~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 94 VHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp EECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCC
T ss_pred cccCCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCE
Confidence 7788999999999999 7 8999999999999999998763 3445567999999999999 5899
Q ss_pred EeeeecCCCcEEEECCCCCcc----eec-ccCCcccceeeeEEEEeCCC--CeEEEEcCCCCeEEEEeCCCCC
Q psy11351 137 LLGLRRRLPPVLYNTRSSSPV----AQF-DHEGYYNSCTMKSCCFAGTQ--DEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 137 l~~~~~d~~v~v~d~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
+++++.|+.|++||++++... ..+ .|.+.+.+ ++|+|.+ +.+|++++.||.|++||+.+++
T Consensus 173 l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~-----l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 173 FVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD-----VAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp EEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE-----EEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred EEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEE-----EEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 999999999999999887433 333 35555544 6777732 8999999999999999999874
No 90
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.5e-31 Score=209.09 Aligned_cols=196 Identities=14% Similarity=0.150 Sum_probs=154.2
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEE---eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCe
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFY---LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPF 82 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i 82 (224)
++++|++|+.||+|++||++++...... .+...+.+++|+|++ ++|++|+.||.|++||++. +.+..+.+|...|
T Consensus 176 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v 253 (435)
T 4e54_B 176 NTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDG-KELWNLRMHKKKV 253 (435)
T ss_dssp CTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSS-CBCCCSBCCSSCE
T ss_pred CCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCc-ceeEEEecccceE
Confidence 5779999999999999999876655444 234568899999998 8999999999999999864 5677889999999
Q ss_pred EEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeE---eecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCccee
Q psy11351 83 HAVMFNPVEARLVATANSKDGIALYDTRKPKEVLM---QYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQ 159 (224)
Q Consensus 83 ~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~ 159 (224)
.+++|+|.+..++++++.|+.|++||+++.+.... ..+|...|++++|+|+|++|++++.|+.|++||+++++....
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLG 333 (435)
T ss_dssp EEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEE
T ss_pred EeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceE
Confidence 99999995567899999999999999987654333 346899999999999999999999999999999999877666
Q ss_pred c-ccCCc-ccceeeeEEEEeCCCCeEEEEc------------CCCCeEEEEeCCCCCeE
Q psy11351 160 F-DHEGY-YNSCTMKSCCFAGTQDEYVVSG------------SDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 160 ~-~~~~~-~~~~~~~~~~~~~~~~~~l~s~------------~~d~~v~iw~~~~~~~~ 204 (224)
+ .|... ........+.|+| ++.+++++ ..++.|++||..+++..
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~ 391 (435)
T 4e54_B 334 LIPHPHRHFQHLTPIKAAWHP-RYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMM 391 (435)
T ss_dssp ECCCCCCCCSSSCCCBCEECS-SSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEE
T ss_pred EecccccccccceeEEEEEcC-CCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEE
Confidence 5 33221 1111222345555 34444433 34568999999999875
No 91
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.2e-31 Score=203.40 Aligned_cols=192 Identities=19% Similarity=0.254 Sum_probs=161.1
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCC--cEEEEecCCCEEEEEecCCcccceeeccCCcCeE
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQD--AIFASACDDGRVLLFDTRSREEATELAVNSGPFH 83 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~ 83 (224)
.++++++++.||.|++||+.+++....+.+...+.++.|+|.+. .++++++.|+.|++||+++++.+..+..|...|.
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~ 190 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEIL 190 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEE
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEE
Confidence 56789999999999999999999998888999999999998642 4999999999999999999999999999999999
Q ss_pred EEEEcCCCCC-eEEEecCCCcEEEEecCCCceee-Ee---------------ecCCCceeEEEEcCCCCeEeeeecCCCc
Q psy11351 84 AVMFNPVEAR-LVATANSKDGIALYDTRKPKEVL-MQ---------------YGSCESCMSIRFNKAGTQLLGLRRRLPP 146 (224)
Q Consensus 84 ~~~~~~~~~~-~l~~~~~dg~v~i~d~~~~~~~~-~~---------------~~~~~~v~~~~~~~~~~~l~~~~~d~~v 146 (224)
+++|+| ++. ++++++.||.|++||+++..... .+ ..|...|.+++|+|++++|++++.|+.|
T Consensus 191 ~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 191 AVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence 999999 555 69999999999999998765322 22 3588899999999999999999999999
Q ss_pred EEEECCCCCcceec------------------------------------------------ccCCcccceeeeEEEEeC
Q psy11351 147 VLYNTRSSSPVAQF------------------------------------------------DHEGYYNSCTMKSCCFAG 178 (224)
Q Consensus 147 ~v~d~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~~ 178 (224)
++||+++++....+ .|.+. +..++|+|
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~-----v~~~~~s~ 344 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKT-----VDCCVFQS 344 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSC-----EEEEEEET
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCe-----EEEEEEcC
Confidence 99999876543221 12222 44578888
Q ss_pred CCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 179 TQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 179 ~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
++++|++++.||.|++||+.+++..
T Consensus 345 -~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 345 -NFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp -TTTEEEEEETTSCEEEEEECC----
T ss_pred -CCCEEEEECCCCeEEEEeCCCCCcc
Confidence 7899999999999999999998764
No 92
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=3.2e-31 Score=196.74 Aligned_cols=175 Identities=9% Similarity=0.085 Sum_probs=138.2
Q ss_pred CCCcEEEEeC-CCCceeeEE-eccCCeeEEEEcC---CCCcEEEEecCCCEEEEEecCCcccceeeccCC---cCeEEEE
Q psy11351 15 NDDHVISHDM-ASGDPIDFY-LHERPVYGLSVDP---SQDAIFASACDDGRVLLFDTRSREEATELAVNS---GPFHAVM 86 (224)
Q Consensus 15 ~dg~i~iwd~-~~~~~~~~~-~~~~~v~~~~~~~---~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---~~i~~~~ 86 (224)
.|++|++|++ ++++.+... +|...++.++|+| ++ .+|++++.|++|+|||+++++.++++.+|. ..+.+++
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~va 233 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKA 233 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEE
Confidence 4999999999 447766654 8999999999998 55 799999999999999999999999997654 3677889
Q ss_pred EcCCCCCeE------------EEecCCCcEEEEecCCCceeeEe-----ecCCCceeEEEEcCCCCeEeeeecCCCcEEE
Q psy11351 87 FNPVEARLV------------ATANSKDGIALYDTRKPKEVLMQ-----YGSCESCMSIRFNKAGTQLLGLRRRLPPVLY 149 (224)
Q Consensus 87 ~~~~~~~~l------------~~~~~dg~v~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~ 149 (224)
|+| ++.++ ++|+.|+++++||..+++.+..+ .+|...+.+..++ +..+++++.|++|++|
T Consensus 234 fSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIW 310 (356)
T 2w18_A 234 YSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIW 310 (356)
T ss_dssp EEE-TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEE
T ss_pred ECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEE
Confidence 999 77765 66889999999999998765544 2455554444443 7889999999999999
Q ss_pred ECCCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeC
Q psy11351 150 NTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRV 198 (224)
Q Consensus 150 d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~ 198 (224)
|+.+++.+.++ .|...+.. .++|+| ++++|++|+.|++|+|||+
T Consensus 311 Dl~tGk~l~tL~gH~~~vvs----~vafSP-DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 311 DLLLGQCTALLPPVSDQHWS----FVKWSG-TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ETTTCSEEEEECCC--CCCC----EEEECS-SSSEEEEECTTSCEEEEEE
T ss_pred ECCCCcEEEEecCCCCCeEE----EEEECC-CCCEEEEEECCCcEEEecC
Confidence 99999999998 45554432 367888 7999999999999999985
No 93
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.5e-31 Score=201.89 Aligned_cols=188 Identities=15% Similarity=0.227 Sum_probs=158.0
Q ss_pred ceEEEEEeCCCcEEEEeCCCCc-eeeEE-eccCCeeEEEE------cCCCCcEEEEecCCCEEEEEecCCcc-cceeecc
Q psy11351 7 IKVLRVIGNDDHVISHDMASGD-PIDFY-LHERPVYGLSV------DPSQDAIFASACDDGRVLLFDTRSRE-EATELAV 77 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~-~~~~~-~~~~~v~~~~~------~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~ 77 (224)
+++|++|+.||.|++||+.+++ .+..+ +|...|.+++| +|++ ++|++++.|+.|++||+++++ ++..+..
T Consensus 80 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 158 (357)
T 3i2n_A 80 QRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGA-PEIVTGSRDGTVKVWDPRQKDDPVANMEP 158 (357)
T ss_dssp TCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CC-CEEEEEETTSCEEEECTTSCSSCSEEECC
T ss_pred CceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCc-cEEEEEeCCCeEEEEeCCCCCCcceeccc
Confidence 6899999999999999999887 66666 89999999965 6777 799999999999999999887 6777765
Q ss_pred CCc----CeEEEE----EcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcC---CCCeEeeeecCCCc
Q psy11351 78 NSG----PFHAVM----FNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNK---AGTQLLGLRRRLPP 146 (224)
Q Consensus 78 ~~~----~i~~~~----~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v 146 (224)
|.+ .+.+++ |+| ++.++++++.||.|++||+++++. .....|...+.+++|+| +++++++++.|+.|
T Consensus 159 ~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 236 (357)
T 3i2n_A 159 VQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMAL-RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKF 236 (357)
T ss_dssp CTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEE-EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEE
T ss_pred cCCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCce-eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeE
Confidence 554 789998 778 889999999999999999998865 44566889999999999 99999999999999
Q ss_pred EEEECCCCCcceec------ccCCcccceeeeEEEEeCCCCe-EEEEcCCCCeEEEEeCCCCCe
Q psy11351 147 VLYNTRSSSPVAQF------DHEGYYNSCTMKSCCFAGTQDE-YVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 147 ~v~d~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~v~iw~~~~~~~ 203 (224)
++||+++++....+ .|...+. .++|+| ++. +|++++.||.|++||++.+..
T Consensus 237 ~i~d~~~~~~~~~~~~~~~~~~~~~v~-----~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~ 294 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSEKAHKSTVW-----QVRHLP-QNRELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp EEEEEEEEETTTEEEEEEEECCSSCEE-----EEEEET-TEEEEEEEEETTSEEEEEEEECCSC
T ss_pred EEEeCcCCCcccceeeeccCCCcCCEE-----EEEECC-CCCcEEEEEeCCCcEEEeecCCCcc
Confidence 99999887766554 3444444 477777 566 899999999999999987643
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.7e-30 Score=203.50 Aligned_cols=183 Identities=13% Similarity=0.206 Sum_probs=165.1
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEE
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHA 84 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~ 84 (224)
.++++++|+.||+|++||+.+++.+..+ +|...|.+++|+ + +++++|+.||+|++||+++++.+..+.+|...|.+
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 204 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--D-NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 204 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--C-CEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEE
Confidence 4678999999999999999999988877 899999999998 3 69999999999999999999999999999999999
Q ss_pred EEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec-ccC
Q psy11351 85 VMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF-DHE 163 (224)
Q Consensus 85 ~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~~~ 163 (224)
+.|++ ..+++++.||.|++||+++++....+..|...+.+++| +++++++++.|+.|++||+++++.+..+ .|.
T Consensus 205 ~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 279 (445)
T 2ovr_B 205 MHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 279 (445)
T ss_dssp EEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCS
T ss_pred EEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCC
Confidence 99965 67999999999999999999888888899999999999 7899999999999999999999888887 466
Q ss_pred CcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 164 GYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
..+.+ +.| ++.++++++.|+.|++||+++++..
T Consensus 280 ~~v~~-----~~~---~~~~l~~~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 280 NRVYS-----LQF---DGIHVVSGSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp SCEEE-----EEE---CSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CceEE-----EEE---CCCEEEEEeCCCeEEEEECCCCCEE
Confidence 66554 344 6789999999999999999998775
No 95
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.2e-31 Score=221.20 Aligned_cols=196 Identities=14% Similarity=0.181 Sum_probs=173.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc-ccceeeccCC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR-EEATELAVNS 79 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~ 79 (224)
+.++++++|++++.||.|++||+.+++.+..+ +|...|++++|+|++ ++|++++.||.|++||++++ .....+..|.
T Consensus 62 ~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 140 (814)
T 3mkq_A 62 KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 (814)
T ss_dssp EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSEEEEEEECCS
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCceEEEEEcCCC
Confidence 44567889999999999999999999988877 799999999999998 79999999999999999887 5667788999
Q ss_pred cCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecC-CCceeEEEEcC--CCCeEeeeecCCCcEEEECCCCCc
Q psy11351 80 GPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGS-CESCMSIRFNK--AGTQLLGLRRRLPPVLYNTRSSSP 156 (224)
Q Consensus 80 ~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~l~~~~~d~~v~v~d~~~~~~ 156 (224)
..|.+++|+|.++..+++++.||.|++||++++.....+..+ ...+.+++|+| ++.++++++.|+.|++||+++++.
T Consensus 141 ~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 999999999966789999999999999999988776666654 48899999999 899999999999999999999988
Q ss_pred ceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 157 VAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 157 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+..+ .|.+.+.+ ++|+| +++++++++.||.|++||+.+++..
T Consensus 221 ~~~~~~~~~~v~~-----~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 221 VATLEGHMSNVSF-----AVFHP-TLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp EEEEECCSSCEEE-----EEECS-SSSEEEEEETTSCEEEEETTTCSEE
T ss_pred EEEEcCCCCCEEE-----EEEcC-CCCEEEEEeCCCeEEEEECCCCcEE
Confidence 8877 46555544 66777 7899999999999999999988764
No 96
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.2e-31 Score=199.89 Aligned_cols=194 Identities=13% Similarity=0.133 Sum_probs=153.0
Q ss_pred ceEEEEEeCCCcEEEEeCCC-Ccee-eEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeE
Q psy11351 7 IKVLRVIGNDDHVISHDMAS-GDPI-DFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFH 83 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~-~~~~-~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~ 83 (224)
+++|++|+.||.|++||+.+ ++.+ ..+ +|...|++++|+|++ ++|++++.||.|++||+++++.+. +..|...|.
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~ 131 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG-SKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVK 131 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEE-EEECSSCEE
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC-CEEEEEcCCCcEEEEEcCCCCcee-eccccCceE
Confidence 69999999999999999997 5554 334 899999999999998 899999999999999999888655 567899999
Q ss_pred EEEE--cCCCCCeEEEecCCCcEEEEecCCCceeeEeecC----------------------------------------
Q psy11351 84 AVMF--NPVEARLVATANSKDGIALYDTRKPKEVLMQYGS---------------------------------------- 121 (224)
Q Consensus 84 ~~~~--~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~---------------------------------------- 121 (224)
+++| +| ++.++++++.||.|++||+++++....+..+
T Consensus 132 ~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 210 (368)
T 3mmy_A 132 TIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP 210 (368)
T ss_dssp EEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCS
T ss_pred EEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhcccc
Confidence 9999 88 8889999999999999999987655444322
Q ss_pred -CCceeEEEEcCCCCe----EeeeecCCCcEEEECCCCC---cceec-ccCCcc-------cceeeeEEEEeCCCCeEEE
Q psy11351 122 -CESCMSIRFNKAGTQ----LLGLRRRLPPVLYNTRSSS---PVAQF-DHEGYY-------NSCTMKSCCFAGTQDEYVV 185 (224)
Q Consensus 122 -~~~v~~~~~~~~~~~----l~~~~~d~~v~v~d~~~~~---~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~l~ 185 (224)
...+.++.+.++... +++++.|+.|++||++... .+..+ .|.... ....+..++|+| ++++|+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~ 289 (368)
T 3mmy_A 211 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP-VHGTLA 289 (368)
T ss_dssp CSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT-TTCCEE
T ss_pred ccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEec-CCCEEE
Confidence 233455555555444 8999999999999998773 34444 232210 000255678888 789999
Q ss_pred EcCCCCeEEEEeCCCCCeE
Q psy11351 186 SGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 186 s~~~d~~v~iw~~~~~~~~ 204 (224)
+++.||.|++||+.+++..
T Consensus 290 s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 290 TVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEETTSCEEEEETTTTEEE
T ss_pred EEccCCeEEEEECCCCcEE
Confidence 9999999999999998775
No 97
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-31 Score=206.79 Aligned_cols=184 Identities=10% Similarity=0.128 Sum_probs=165.0
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEE
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAV 85 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~ 85 (224)
...+++++.||.|++||+.+++.+..+ .|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+..|...|.++
T Consensus 217 ~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~ 295 (425)
T 1r5m_A 217 DDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSA 295 (425)
T ss_dssp TTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEE
T ss_pred CCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEE
Confidence 356899999999999999999888777 899999999999998 799999999999999999999999999999999999
Q ss_pred EEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCC----------
Q psy11351 86 MFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSS---------- 155 (224)
Q Consensus 86 ~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~---------- 155 (224)
+|+| ++ ++++++.|+.|++||+++++....+..|...+.+++|+|++++|++++.|+.|++||+++++
T Consensus 296 ~~~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 373 (425)
T 1r5m_A 296 SWVG-DD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNR 373 (425)
T ss_dssp EEET-TT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC---------
T ss_pred EECC-CC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeeccc
Confidence 9999 66 99999999999999999998888888899999999999999999999999999999998776
Q ss_pred ----------cceec-ccCC--cccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCC
Q psy11351 156 ----------PVAQF-DHEG--YYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 156 ----------~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~ 199 (224)
.+..+ .|.. .+ ..++|+| ++++|++++.||.|++|+++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~v-----~~~~~s~-~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 374 DGILNPLPIPLYASYQSSQDNDYI-----FDLSWNC-AGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp -----CEECCEEEEECCTTCCCCE-----EEEEECT-TSSEEEEEESSSCCEEEECC
T ss_pred ccccCcccchhhhhhcCcccCCce-----EEEEccC-CCceEEEEecCceEEEEeec
Confidence 55555 3332 44 4477777 78999999999999999986
No 98
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.9e-31 Score=199.91 Aligned_cols=195 Identities=9% Similarity=0.047 Sum_probs=162.1
Q ss_pred CCCcce-EEEEEeCCCcEEEEeC-CCCceeeEEe--ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCC---------c
Q psy11351 3 SGDPIK-VLRVIGNDDHVISHDM-ASGDPIDFYL--HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRS---------R 69 (224)
Q Consensus 3 ~~~~~~-~l~~~~~dg~i~iwd~-~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---------~ 69 (224)
..+.++ +|++|+.||.|++||+ .+++.....+ |...|.+++|+| + ++|++++.|+.|++||+++ +
T Consensus 64 ~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 141 (342)
T 1yfq_A 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKN 141 (342)
T ss_dssp EEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEE
T ss_pred ECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccC
Confidence 345678 9999999999999999 8887755557 999999999999 6 8999999999999999998 7
Q ss_pred ccceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCC-Cce--eeEeecCCCceeEEEEcC-CCCeEeeeecCCC
Q psy11351 70 EEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRK-PKE--VLMQYGSCESCMSIRFNK-AGTQLLGLRRRLP 145 (224)
Q Consensus 70 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~ 145 (224)
+++..+. |...+.+++|+| +. +++++.++.|++||+++ ... ......+...+.+++|+| +++++++++.|+.
T Consensus 142 ~~~~~~~-~~~~v~~~~~~~-~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~ 217 (342)
T 1yfq_A 142 LNSNNTK-VKNKIFTMDTNS-SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR 217 (342)
T ss_dssp SCSSSSS-SCCCEEEEEECS-SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE
T ss_pred CeeeEEe-eCCceEEEEecC-Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc
Confidence 7777776 888999999998 54 88999999999999998 543 223446888999999999 9999999999999
Q ss_pred cEEEECCCC------Ccceec-ccCCcc----cceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 146 PVLYNTRSS------SPVAQF-DHEGYY----NSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 146 v~v~d~~~~------~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+++|+++.. +....+ .|.... ....+..++|+| ++++|++++.||.|++||+.+++..
T Consensus 218 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 218 VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEcCccHhHh
Confidence 999999876 666666 343200 011344578888 6899999999999999999998765
No 99
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-31 Score=200.73 Aligned_cols=188 Identities=13% Similarity=0.050 Sum_probs=154.0
Q ss_pred CcceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecC---------Ccccceee
Q psy11351 5 DPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTR---------SREEATEL 75 (224)
Q Consensus 5 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~---------~~~~~~~~ 75 (224)
.++.++++|+.||+|++||+++++.+..+. ...|.++.|+|. +++++.|++|++|+.. +++.+..+
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~ 120 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKVLREI 120 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcceeEEe
Confidence 457899999999999999999998877765 567888889885 9999999999999766 33333333
Q ss_pred c-cCCcCeEEEEEcCC-CCCeEEEecCCCcEEEEecCCCceeeEee-cCCCceeEEEEcCCCCeEeeeecCCCcEEEECC
Q psy11351 76 A-VNSGPFHAVMFNPV-EARLVATANSKDGIALYDTRKPKEVLMQY-GSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTR 152 (224)
Q Consensus 76 ~-~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~ 152 (224)
. .|...|.+++|+|. ++.++++++.||.|++||+++++...... .+...+.+++|+|++.+|++|+.|+.|++||++
T Consensus 121 ~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~ 200 (343)
T 3lrv_A 121 EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS 200 (343)
T ss_dssp ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 3 56688999999982 46899999999999999999887755443 456689999999999999999999999999999
Q ss_pred CCCcc-eec-c-cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 153 SSSPV-AQF-D-HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 153 ~~~~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+++.+ ..+ . |.+.+.+ ++|+| ++.+|++++ |+.|++||+++++..
T Consensus 201 ~~~~~~~~~~~~h~~~v~~-----l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 201 SPDQASSRFPVDEEAKIKE-----VKFAD-NGYWMVVEC-DQTVVCFDLRKDVGT 248 (343)
T ss_dssp CTTSCCEECCCCTTSCEEE-----EEECT-TSSEEEEEE-SSBEEEEETTSSTTC
T ss_pred CCCCCccEEeccCCCCEEE-----EEEeC-CCCEEEEEe-CCeEEEEEcCCCCcc
Confidence 99887 566 3 6666554 66777 799999999 559999999988653
No 100
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.2e-29 Score=197.45 Aligned_cols=188 Identities=16% Similarity=0.230 Sum_probs=159.3
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEE---eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeE
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFY---LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFH 83 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~ 83 (224)
+++||+|. |++|+|||..+++....+ +|...|++++|+|++ ++|++|+.||+|++||+++++.+..+.+|...+.
T Consensus 116 ~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~ 193 (420)
T 4gga_A 116 GNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG 193 (420)
T ss_dssp TSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE
Confidence 45777775 999999999999988766 578889999999999 8999999999999999999999999999999999
Q ss_pred EEEEcCCCCCeEEEecCCCcEEEEecCCCce-eeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCccee---
Q psy11351 84 AVMFNPVEARLVATANSKDGIALYDTRKPKE-VLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQ--- 159 (224)
Q Consensus 84 ~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~--- 159 (224)
++.+++ .++++|+.|+.+++||.+.... ...+..|...+..+.|+|+++++++++.|+.+++|+..+++....
T Consensus 194 ~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~ 270 (420)
T 4gga_A 194 SLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ 270 (420)
T ss_dssp EEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSE
T ss_pred EEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeee
Confidence 998854 7999999999999999986543 455668999999999999999999999999999999987754322
Q ss_pred -c-ccCCcccceeeeEEEEeCCCCeEEEE--cCCCCeEEEEeCCCCCeE
Q psy11351 160 -F-DHEGYYNSCTMKSCCFAGTQDEYVVS--GSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 160 -~-~~~~~~~~~~~~~~~~~~~~~~~l~s--~~~d~~v~iw~~~~~~~~ 204 (224)
. .|.+.+ ..++|+|.+..++++ |+.|+.|++||+.+++..
T Consensus 271 ~~~~~~~~V-----~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~ 314 (420)
T 4gga_A 271 TFTQHQGAV-----KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 314 (420)
T ss_dssp EECCCSSCE-----EEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE
T ss_pred eecccCCce-----eeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc
Confidence 2 344443 347788866677665 568999999999998774
No 101
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.98 E-value=3e-30 Score=200.81 Aligned_cols=194 Identities=20% Similarity=0.198 Sum_probs=155.8
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE------------------------------------------eccCCe
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY------------------------------------------LHERPV 39 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~------------------------------------------~~~~~v 39 (224)
+.++.|++|++|+.||+|+|||+++++.+..+ +|...+
T Consensus 154 ~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~ 233 (420)
T 4gga_A 154 AWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV 233 (420)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE
T ss_pred EECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccce
Confidence 45677889999999999999998876543322 456667
Q ss_pred eEEEEcCCCCcEEEEecCCCEEEEEecCCccc----ceeeccCCcCeEEEEEcCCCCCeEEE--ecCCCcEEEEecCCCc
Q psy11351 40 YGLSVDPSQDAIFASACDDGRVLLFDTRSREE----ATELAVNSGPFHAVMFNPVEARLVAT--ANSKDGIALYDTRKPK 113 (224)
Q Consensus 40 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~l~~--~~~dg~v~i~d~~~~~ 113 (224)
..+.|+|++ +++++++.|+.+++||..+++. +.....|...|.+++|+|.+..++++ |+.|+.|++||+++++
T Consensus 234 ~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~ 312 (420)
T 4gga_A 234 CGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 312 (420)
T ss_dssp EEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE
T ss_pred eeeeecCCC-CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc
Confidence 777777777 6788888888888888776542 34556788899999999977777776 4579999999999997
Q ss_pred eeeEeecCCCceeEEEEcCCCCeEeeee--cCCCcEEEECCCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCC
Q psy11351 114 EVLMQYGSCESCMSIRFNKAGTQLLGLR--RRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDD 190 (224)
Q Consensus 114 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d 190 (224)
....+. +...+.++.|+|+++.+++++ .|+.|++||+++++++..+ .|.+.|.+ ++|+| ++.+|+||+.|
T Consensus 313 ~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~-----l~~sp-dg~~l~S~s~D 385 (420)
T 4gga_A 313 CLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLS-----LTMSP-DGATVASAAAD 385 (420)
T ss_dssp EEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEE-----EEECT-TSSCEEEEETT
T ss_pred cceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEE-----EEEcC-CCCEEEEEecC
Confidence 766655 456788999999999888765 7899999999999999988 57777665 66777 79999999999
Q ss_pred CeEEEEeCCCCCe
Q psy11351 191 FVLYMWRVPRDDI 203 (224)
Q Consensus 191 ~~v~iw~~~~~~~ 203 (224)
++|++||+.+...
T Consensus 386 ~tvriWdv~~~~~ 398 (420)
T 4gga_A 386 ETLRLWRCFELDP 398 (420)
T ss_dssp TEEEEECCSCSSC
T ss_pred CeEEEEECCCCCc
Confidence 9999999987654
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.5e-30 Score=204.14 Aligned_cols=193 Identities=15% Similarity=0.137 Sum_probs=161.4
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCc---eeeEEe--------------------------------------------
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGD---PIDFYL-------------------------------------------- 34 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~-------------------------------------------- 34 (224)
+.+..|++|+++ .++.|++||+.+++ .+..+.
T Consensus 11 ~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (450)
T 2vdu_B 11 LTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRTAA 89 (450)
T ss_dssp EECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------------
T ss_pred EecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccccCc
Confidence 346677766655 57899999999888 444331
Q ss_pred -----------ccCCeeEEEEcCCCCcE-EEEecCCCEEEEEecC--Ccccceeec--cCCcCeEEEEEcCCCCCeEEEe
Q psy11351 35 -----------HERPVYGLSVDPSQDAI-FASACDDGRVLLFDTR--SREEATELA--VNSGPFHAVMFNPVEARLVATA 98 (224)
Q Consensus 35 -----------~~~~v~~~~~~~~~~~~-l~s~~~d~~i~iwd~~--~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~ 98 (224)
|.+.|++++|+|++ ++ +++++.|+.|++||+. +++.+..+. .|...|.+++|+| ++.+|+++
T Consensus 90 ~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~ 167 (450)
T 2vdu_B 90 KVPSPGLGAPPIYSYIRNLRLTSDE-SRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DDTTVIIA 167 (450)
T ss_dssp ----------CCCCCEEEEEECTTS-SEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TSSEEEEE
T ss_pred cccCCCCCCCccCCceEEEEEcCCC-CEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CCCEEEEE
Confidence 22369999999999 66 5999999999999999 788777776 5678899999999 88999999
Q ss_pred cCCCcEEEEecCCCceee----EeecCCCceeEEEEcCC---CCeEeeeecCCCcEEEECCCCCcceec--ccCCcccce
Q psy11351 99 NSKDGIALYDTRKPKEVL----MQYGSCESCMSIRFNKA---GTQLLGLRRRLPPVLYNTRSSSPVAQF--DHEGYYNSC 169 (224)
Q Consensus 99 ~~dg~v~i~d~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~v~d~~~~~~~~~~--~~~~~~~~~ 169 (224)
+.+|.+++|++.+.+... .+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+ .|.+.+.+
T Consensus 168 ~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~- 246 (450)
T 2vdu_B 168 DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSS- 246 (450)
T ss_dssp ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEE-
T ss_pred eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEE-
Confidence 999999999998776443 56679999999999999 999999999999999999999888774 46665554
Q ss_pred eeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 170 TMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 170 ~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
++|+ ++.+|++++.|+.|++||+.+++..
T Consensus 247 ----~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 247 ----ICCG--KDYLLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp ----EEEC--STTEEEEEESSSEEEEEETTTCCEE
T ss_pred ----EEEC--CCCEEEEEeCCCeEEEEECCCCcEe
Confidence 6777 6899999999999999999999864
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=7.6e-31 Score=217.53 Aligned_cols=190 Identities=11% Similarity=0.175 Sum_probs=160.0
Q ss_pred ceEEEEEeCCCcEEEEeCCCCc--eeeEE-eccCCeeEEEEcCC--CCcEEEEecCCCEEEEEecCCcc--cceeeccCC
Q psy11351 7 IKVLRVIGNDDHVISHDMASGD--PIDFY-LHERPVYGLSVDPS--QDAIFASACDDGRVLLFDTRSRE--EATELAVNS 79 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~ 79 (224)
++++++|+.||+|++||+.+++ .+..+ +|...|++++|+|+ + +.+++|+.||.|++||++++. ....+..|.
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~ 145 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIIDAHA 145 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCCCCEEEECCS
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCcceeEeecCC
Confidence 8899999999999999999886 44444 79999999999999 7 899999999999999998874 345567899
Q ss_pred cCeEEEEEcCC------------CCCeEEEecCCCcEEEEecCCCc----eeeEeecCCCceeEEEEcCC---CCeEeee
Q psy11351 80 GPFHAVMFNPV------------EARLVATANSKDGIALYDTRKPK----EVLMQYGSCESCMSIRFNKA---GTQLLGL 140 (224)
Q Consensus 80 ~~i~~~~~~~~------------~~~~l~~~~~dg~v~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~---~~~l~~~ 140 (224)
..|.+++|+|. ++.++++|+.||.|++||++++. ....+..|...|++++|+|+ +++++++
T Consensus 146 ~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~ 225 (753)
T 3jro_A 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 225 (753)
T ss_dssp SCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEE
Confidence 99999999994 37899999999999999998773 34455679999999999999 8999999
Q ss_pred ecCCCcEEEECCCCCcc-----eec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 141 RRRLPPVLYNTRSSSPV-----AQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 141 ~~d~~v~v~d~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
+.|+.|++||++++... ... .+.+.+.+ ++|+| ++.++++++.||.|++|++..+..
T Consensus 226 s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~-----l~~sp-dg~~l~s~s~Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 226 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWR-----ASWSL-SGNVLALSGGDNKVTLWKENLEGK 288 (753)
T ss_dssp ESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCC-----EEECT-TTCCEEEECSSSCEECCBCCSSSC
T ss_pred ecCCEEEEecCCCCCCcceeEEeccCCCCCceEE-----EEEcC-CCCEEEEEcCCCEEEEEecCCCCC
Confidence 99999999999886422 111 24555544 67777 799999999999999999986544
No 104
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=3e-30 Score=208.92 Aligned_cols=193 Identities=12% Similarity=0.200 Sum_probs=168.2
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCC----ceeeEE-eccCC-eeEEEEcC--CCCcEEEEecCCCEEEEEecCCc---
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASG----DPIDFY-LHERP-VYGLSVDP--SQDAIFASACDDGRVLLFDTRSR--- 69 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~-~~~~~-v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~--- 69 (224)
++.++++++|++++ ++.|++||+.++ +....+ +|... |++++|+| ++ ++|++++.||.|++||+.++
T Consensus 24 ~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~~~~~~ 101 (615)
T 1pgu_A 24 LSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS-QYLCSGDESGKVIVWGWTFDKES 101 (615)
T ss_dssp CEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTC-CEEEEEETTSEEEEEEEEEEGGG
T ss_pred EEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCC-CEEEEecCCCEEEEEeCCCCccc
Confidence 45677889999998 889999999988 777666 89999 99999999 98 89999999999999999755
Q ss_pred -----ccceeeccCCcCeEEEEEcCCCCCeEEEecCC----CcEEEEecCCCceeeEeecCCCceeEEEEcCCCC-eEee
Q psy11351 70 -----EEATELAVNSGPFHAVMFNPVEARLVATANSK----DGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGT-QLLG 139 (224)
Q Consensus 70 -----~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~ 139 (224)
+....+..|...|.+++|+| +++++++++.+ +.|.+|| .++....+..|...|.+++|+|+++ .+++
T Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 178 (615)
T 1pgu_A 102 NSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMT 178 (615)
T ss_dssp TEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEE
T ss_pred ccccccccchhhcccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEE
Confidence 56677788999999999999 88999999887 6899998 4556777788999999999999998 7999
Q ss_pred eecCCCcEEEECCCCCcceec-ccCC---cccceeeeEEEEeCCC-CeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 140 LRRRLPPVLYNTRSSSPVAQF-DHEG---YYNSCTMKSCCFAGTQ-DEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 140 ~~~d~~v~v~d~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~-~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
++.|+.|++||+++++.+..+ .|.. .+. .++|+| + +++|++++.|+.|++||+.+++..
T Consensus 179 ~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~-----~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 179 VGDDGSVVFYQGPPFKFSASDRTHHKQGSFVR-----DVEFSP-DSGEFVITVGSDRKISCFDGKSGEFL 242 (615)
T ss_dssp EETTTEEEEEETTTBEEEEEECSSSCTTCCEE-----EEEECS-TTCCEEEEEETTCCEEEEETTTCCEE
T ss_pred EeCCCcEEEEeCCCcceeeeecccCCCCceEE-----EEEECC-CCCCEEEEEeCCCeEEEEECCCCCEe
Confidence 999999999999999888887 4555 444 467777 6 999999999999999999998875
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-30 Score=192.82 Aligned_cols=184 Identities=12% Similarity=0.104 Sum_probs=157.2
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcC-CCCcEEEEecCCCEEEEEecCCcccceeecc-CCcCe
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDP-SQDAIFASACDDGRVLLFDTRSREEATELAV-NSGPF 82 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~i 82 (224)
.++++++++.||.|++|| .++....+ .|...+.+++|+| ++ +++++++.|+.|++|| .++....+.. |...+
T Consensus 113 ~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i 187 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSE-NKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVV 187 (313)
T ss_dssp ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTT-TEEEEEETTSCEEEEE--TTEEEEEECSSCSSCE
T ss_pred cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCC-CEEEEEECCCCEEEEe--cCceEEEEeccCcccE
Confidence 356899999999999999 55555555 7999999999998 55 8999999999999999 3445566665 88999
Q ss_pred EEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec-c
Q psy11351 83 HAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF-D 161 (224)
Q Consensus 83 ~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~ 161 (224)
.+++|+| ++. +++++.||.|++||+++++....+..|...|.+++|+|++ .+++++.|+.|++||+++++.+..+ .
T Consensus 188 ~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~ 264 (313)
T 3odt_A 188 RHLAVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITL 264 (313)
T ss_dssp EEEEEEE-TTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEEC
T ss_pred EEEEEcC-CCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEec
Confidence 9999999 666 8899999999999999998888888999999999999999 6889999999999999999988888 4
Q ss_pred cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 162 HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+...+. .++|+| ++. +++++.||.|++||+++++..
T Consensus 265 ~~~~i~-----~~~~~~-~~~-~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 265 PAISIW-----SVDCMS-NGD-IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp SSSCEE-----EEEECT-TSC-EEEEETTSCEEEEESCGGGCC
T ss_pred cCceEE-----EEEEcc-CCC-EEEEeCCCcEEEEeCCCCcee
Confidence 555544 467777 566 667889999999999988664
No 106
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=188.94 Aligned_cols=185 Identities=10% Similarity=0.059 Sum_probs=156.8
Q ss_pred CcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc---ccceeeccCCc
Q psy11351 5 DPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR---EEATELAVNSG 80 (224)
Q Consensus 5 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~ 80 (224)
.++++|++++.||.|++||+.+++....+ .|...|.+++|+|++ +++++++.|+.|++|++... +....+..|..
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~ 105 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEK-ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQG 105 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTT-TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSS
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCC-CEEEEecCCCeEEEEEeeecCCCCcccchhhccc
Confidence 45778999999999999999988877766 899999999999998 89999999999999998765 45677788999
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcC-CCCeEeeeecCCCcEEEECCCCCccee
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNK-AGTQLLGLRRRLPPVLYNTRSSSPVAQ 159 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~v~d~~~~~~~~~ 159 (224)
.|.+++|+ +.++++++.||.|++|| ..+....+..|...+.++.|.| +++++++++.|+.|++||. .+....
T Consensus 106 ~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~ 178 (313)
T 3odt_A 106 NVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKT 178 (313)
T ss_dssp CEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEE
T ss_pred CEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEE
Confidence 99999994 46999999999999999 5566777778999999999988 8999999999999999994 344444
Q ss_pred c--ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 160 F--DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 160 ~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+ .+...+.+ ++|+| ++. +++++.|+.|++||+++++..
T Consensus 179 ~~~~~~~~i~~-----~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 179 FSGIHNDVVRH-----LAVVD-DGH-FISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp ECSSCSSCEEE-----EEEEE-TTE-EEEEETTSEEEEEETTTCCEE
T ss_pred EeccCcccEEE-----EEEcC-CCe-EEEccCCCeEEEEECCchhhh
Confidence 4 25565555 55555 677 899999999999999998775
No 107
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=3.3e-30 Score=208.70 Aligned_cols=192 Identities=11% Similarity=0.113 Sum_probs=167.2
Q ss_pred CCCC--cceEEEEEeCCCcEEEEeCCCC--------ceeeEE-eccCCeeEEEEcCCCCcEEEEecCC----CEEEEEec
Q psy11351 2 ASGD--PIKVLRVIGNDDHVISHDMASG--------DPIDFY-LHERPVYGLSVDPSQDAIFASACDD----GRVLLFDT 66 (224)
Q Consensus 2 a~~~--~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d----~~i~iwd~ 66 (224)
+.++ ++++|++++.||+|++||+.++ +....+ .|...|.+++|+|++ ++|++++.+ +.|++||
T Consensus 71 ~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~~~~v~~~d- 148 (615)
T 1pgu_A 71 KFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWD- 148 (615)
T ss_dssp EECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETT-
T ss_pred EECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCC-CEEEEeccCCCCccEEEEEE-
Confidence 3455 7899999999999999999754 444444 699999999999998 799999887 7899998
Q ss_pred CCcccceeeccCCcCeEEEEEcCCCCC-eEEEecCCCcEEEEecCCCceeeEeecCCC---ceeEEEEcCC-CCeEeeee
Q psy11351 67 RSREEATELAVNSGPFHAVMFNPVEAR-LVATANSKDGIALYDTRKPKEVLMQYGSCE---SCMSIRFNKA-GTQLLGLR 141 (224)
Q Consensus 67 ~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~ 141 (224)
.++.+..+..|...|.+++|+| ++. ++++++.|+.|++||+++.+....+..|.. .|.+++|+|+ +++|++++
T Consensus 149 -~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 226 (615)
T 1pgu_A 149 -SGNSLGEVSGHSQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG 226 (615)
T ss_dssp -TCCEEEECCSCSSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE
T ss_pred -CCCcceeeecCCccEEEEEECC-CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEe
Confidence 5667788899999999999999 555 899999999999999999988888888988 9999999999 99999999
Q ss_pred cCCCcEEEECCCCCcceec-----ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 142 RRLPPVLYNTRSSSPVAQF-----DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 142 ~d~~v~v~d~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
.|+.|++||+++++.+..+ .|...+. .++|+ ++.+|++++.|+.|++||+.+++..
T Consensus 227 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~-----~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 227 SDRKISCFDGKSGEFLKYIEDDQEPVQGGIF-----ALSWL--DSQKFATVGADATIRVWDVTTSKCV 287 (615)
T ss_dssp TTCCEEEEETTTCCEEEECCBTTBCCCSCEE-----EEEES--SSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCeEEEEECCCCCEeEEecccccccCCceE-----EEEEc--CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 9999999999999988887 4555544 46777 5899999999999999999988764
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=7.8e-30 Score=199.30 Aligned_cols=181 Identities=15% Similarity=0.245 Sum_probs=160.6
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccc---eeeccCCcC
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEA---TELAVNSGP 81 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---~~~~~~~~~ 81 (224)
+++++++|+.||+|++||+.+++.+..+ +|...|.+++|++ ..+++|+.||.|++||+++++.. ..+.+|...
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 258 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA 258 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSC
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCc
Confidence 4679999999999999999999988877 8999999999974 58999999999999999988765 667889999
Q ss_pred eEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec-
Q psy11351 82 FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF- 160 (224)
Q Consensus 82 i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~- 160 (224)
|.+++| ++.++++|+.||.|++||+++++....+..|...+.++.|+ ++++++++.|+.|++||+++++.+..+
T Consensus 259 v~~~~~---~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 333 (435)
T 1p22_A 259 VNVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLE 333 (435)
T ss_dssp EEEEEE---ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEEe---CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEe
Confidence 999999 45799999999999999999999888888999999999994 689999999999999999999998888
Q ss_pred ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 161 DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
.|...+.++ +| ++.+|++|+.||.|++||+.+++
T Consensus 334 ~h~~~v~~~-----~~---~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 334 GHEELVRCI-----RF---DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp CCSSCEEEE-----EC---CSSEEEEEETTSCEEEEEHHHHT
T ss_pred CCcCcEEEE-----Ee---cCCEEEEEeCCCcEEEEECCCCC
Confidence 466666553 33 67899999999999999997665
No 109
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.4e-29 Score=192.99 Aligned_cols=192 Identities=14% Similarity=0.156 Sum_probs=151.9
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCC----------------C------------------cEEEE
Q psy11351 9 VLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQ----------------D------------------AIFAS 54 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~----------------~------------------~~l~s 54 (224)
++++++.|++|++||..+++++..+.+...|.+++|+++. . .+++.
T Consensus 73 ~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~ 152 (355)
T 3vu4_A 73 VAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVY 152 (355)
T ss_dssp EEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEE
T ss_pred EEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEE
Confidence 3467788899999999999998888888899999998752 0 12333
Q ss_pred --ecCCCEEEEEecCCcc---------------c-ceeeccCCcCeEEEEEcCCCCCeEEEecCCCc-EEEEecCCCcee
Q psy11351 55 --ACDDGRVLLFDTRSRE---------------E-ATELAVNSGPFHAVMFNPVEARLVATANSKDG-IALYDTRKPKEV 115 (224)
Q Consensus 55 --~~~d~~i~iwd~~~~~---------------~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~-v~i~d~~~~~~~ 115 (224)
|+.||.|++||+++++ + +..+.+|...|.+++|+| ++.+|++|+.|+. |++||+++++.+
T Consensus 153 ~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~ 231 (355)
T 3vu4_A 153 SNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLV 231 (355)
T ss_dssp EESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEE
T ss_pred eCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 6788999999988765 2 677889999999999999 8999999999998 999999999888
Q ss_pred eEee-c-CCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcce--eccc------CCccc-----------ceeeeEE
Q psy11351 116 LMQY-G-SCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVA--QFDH------EGYYN-----------SCTMKSC 174 (224)
Q Consensus 116 ~~~~-~-~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~--~~~~------~~~~~-----------~~~~~~~ 174 (224)
..+. + |...|.+++|+|++++|++++.|++|++||++.+.... .+.. ..... ......+
T Consensus 232 ~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (355)
T 3vu4_A 232 REFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKI 311 (355)
T ss_dssp EEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEE
T ss_pred EEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEE
Confidence 8887 4 99999999999999999999999999999997653211 1100 00000 0001347
Q ss_pred EEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 175 CFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 175 ~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
+|++ ++.++++++.||.+++|++..++
T Consensus 312 a~~~-d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 312 AWIS-ESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp EESS-SSEEEEEETTTTEEEEEEEEEET
T ss_pred EEeC-CCCEEEEEeCCCeEEEEEEEcCC
Confidence 8888 69999999999999999987654
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=2.9e-30 Score=195.18 Aligned_cols=188 Identities=9% Similarity=-0.033 Sum_probs=156.6
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCc----eeeEEeccCCeeEEEEcCCCCc-EEEEecCCCEEEEEec-CCcccceee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGD----PIDFYLHERPVYGLSVDPSQDA-IFASACDDGRVLLFDT-RSREEATEL 75 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~d~~i~iwd~-~~~~~~~~~ 75 (224)
+.++.+++|++++.||.|++||+.+++ .....+|...|++++|+|++ + +|++|+.||.|++||+ .+++ ...+
T Consensus 18 ~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~-~~~~ 95 (342)
T 1yfq_A 18 KIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGEILKVDLIGSPS-FQAL 95 (342)
T ss_dssp EEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS-SEEEEEEETTSCEEEECSSSSSS-EEEC
T ss_pred EEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCC-CcEEEEEcCCCeEEEEEeccCCc-eEec
Confidence 345678899999999999999999887 55555999999999999998 8 9999999999999999 7765 4677
Q ss_pred cc--CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCC---------CceeeEeecCCCceeEEEEcCCCCeEeeeecCC
Q psy11351 76 AV--NSGPFHAVMFNPVEARLVATANSKDGIALYDTRK---------PKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRL 144 (224)
Q Consensus 76 ~~--~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 144 (224)
.. |...|.+++|+| +.++++++.|+.|++||+++ .+....+. +...+.+++|+|++ +++++.|+
T Consensus 96 ~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~ 170 (342)
T 1yfq_A 96 TNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNS 170 (342)
T ss_dssp BSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTT
T ss_pred cccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCC
Confidence 78 999999999999 78999999999999999986 54444333 88999999999987 89999999
Q ss_pred CcEEEECCC-CCcceec---ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCC
Q psy11351 145 PPVLYNTRS-SSPVAQF---DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 145 ~v~v~d~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 201 (224)
.|++||+++ +...... .+... +..++|+|.+++++++++.||.+++|+++..
T Consensus 171 ~i~i~d~~~~~~~~~~~~~~~~~~~-----i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 171 QVQWFRLPLCEDDNGTIEESGLKYQ-----IRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp EEEEEESSCCTTCCCEEEECSCSSC-----EEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred eEEEEECCccccccceeeecCCCCc-----eeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 999999988 5543222 34443 3457888723789999999999999999876
No 111
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.9e-30 Score=214.65 Aligned_cols=194 Identities=16% Similarity=0.166 Sum_probs=154.0
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceee--EE----------eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPID--FY----------LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR 69 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~----------~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 69 (224)
++...+++|++|+.|++|++||+.+++... .+ +|...|++++|+|++ ++||+|+.||+|+|||+.++
T Consensus 442 ~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg-~~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 442 LPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAET-LELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp CCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTT-TEEEEEETTSCEEEEEEEEC
T ss_pred cccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCC-CeEEEEecCcEEEEEEecCc
Confidence 446678999999999999999998875321 11 688899999999999 89999999999999999866
Q ss_pred c---------------------------------------------cceeeccCCcCeEEEEEcCCCCCeEEEecCCCcE
Q psy11351 70 E---------------------------------------------EATELAVNSGPFHAVMFNPVEARLVATANSKDGI 104 (224)
Q Consensus 70 ~---------------------------------------------~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v 104 (224)
+ ++..+.+|.+.|++++|+| ++ +||+|+.|+.|
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp-dG-~lAsgs~D~tv 598 (902)
T 2oaj_A 521 QFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN-IG-FVGIAYAAGSL 598 (902)
T ss_dssp CC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB-TS-EEEEEETTSEE
T ss_pred cccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC-Cc-EEEEEeCCCcE
Confidence 2 2556778999999999999 88 99999999999
Q ss_pred EEEecCCCceee-----Eee-cCCCceeEEEEc-----CCC---CeEeeeecCCCcEEEEC---CCCCcceec-cc----
Q psy11351 105 ALYDTRKPKEVL-----MQY-GSCESCMSIRFN-----KAG---TQLLGLRRRLPPVLYNT---RSSSPVAQF-DH---- 162 (224)
Q Consensus 105 ~i~d~~~~~~~~-----~~~-~~~~~v~~~~~~-----~~~---~~l~~~~~d~~v~v~d~---~~~~~~~~~-~~---- 162 (224)
++||+++...+. .+. +|...|++++|+ ||| ++|++++.|++|++||+ .+|+....+ .|
T Consensus 599 ~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~ 678 (902)
T 2oaj_A 599 MLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVT 678 (902)
T ss_dssp EEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECC
T ss_pred EEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecC
Confidence 999998775443 122 788999999999 885 89999999999999999 677766665 33
Q ss_pred -CCcccceeeeEEEEeC---------------------CCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 163 -EGYYNSCTMKSCCFAG---------------------TQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 163 -~~~~~~~~~~~~~~~~---------------------~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
.+.+..+. .|+. .++.+|+++ +..+++|++.+++..
T Consensus 679 ~~~~v~~i~----~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~ 736 (902)
T 2oaj_A 679 SKGPIHKID----AFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKST 736 (902)
T ss_dssp SSCCCCEEE----EEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEE
T ss_pred CCCceEEEE----eEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccccce
Confidence 34444322 1220 134455554 778999999998775
No 112
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=9e-30 Score=194.06 Aligned_cols=191 Identities=9% Similarity=0.080 Sum_probs=153.4
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP 81 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 81 (224)
++++++++|++|+.|+ ++|||+++++......+ ..+..+++.+++..++++++.|++|++||.++++.+..+. +...
T Consensus 26 ~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~ 102 (355)
T 3vu4_A 26 EFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM-RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAP 102 (355)
T ss_dssp EECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC-SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSC
T ss_pred EECCCCCEEEEEcCCE-EEEEecCCcceeeeeec-CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCc
Confidence 5678889999998775 88999988766554433 3588888998874444778889999999999998887775 5667
Q ss_pred eEEEEEcCCCC-----------------------------------CeEEE--ecCCCcEEEEecCCCc-----------
Q psy11351 82 FHAVMFNPVEA-----------------------------------RLVAT--ANSKDGIALYDTRKPK----------- 113 (224)
Q Consensus 82 i~~~~~~~~~~-----------------------------------~~l~~--~~~dg~v~i~d~~~~~----------- 113 (224)
|.+++|++ +. .+++. |+.+|.|++||+++++
T Consensus 103 v~~v~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~ 181 (355)
T 3vu4_A 103 VKDLFLSR-EFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQ 181 (355)
T ss_dssp EEEEEECS-SEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-------------
T ss_pred eEEEEEcC-CEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccc
Confidence 88888876 31 23333 6788999999998764
Q ss_pred -----eeeEeecCCCceeEEEEcCCCCeEeeeecCCC-cEEEECCCCCcceecc---cCCcccceeeeEEEEeCCCCeEE
Q psy11351 114 -----EVLMQYGSCESCMSIRFNKAGTQLLGLRRRLP-PVLYNTRSSSPVAQFD---HEGYYNSCTMKSCCFAGTQDEYV 184 (224)
Q Consensus 114 -----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-v~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l 184 (224)
....+.+|...|.+++|+|+|++|++++.|++ |++||+++++.+..+. |.+.+.+ ++|+| ++++|
T Consensus 182 ~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~-----~~~s~-~~~~l 255 (355)
T 3vu4_A 182 KAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVD-----MKWST-DGSKL 255 (355)
T ss_dssp -----CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEE-----EEECT-TSCEE
T ss_pred cccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEE-----EEECC-CCCEE
Confidence 15667789999999999999999999999999 9999999999998884 6665554 67777 79999
Q ss_pred EEcCCCCeEEEEeCCCCC
Q psy11351 185 VSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 185 ~s~~~d~~v~iw~~~~~~ 202 (224)
++++.|+.|++||+..+.
T Consensus 256 ~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 256 AVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEETTCEEEEEESSCCS
T ss_pred EEEECCCEEEEEEccCCC
Confidence 999999999999998764
No 113
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=6.7e-29 Score=194.46 Aligned_cols=182 Identities=13% Similarity=0.222 Sum_probs=162.2
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEE
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAV 85 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~ 85 (224)
++++++|+.||+|++||+.+++.+..+ +|...|.+++|++ +.+++|+.|++|++||+++++.+..+.+|...|.++
T Consensus 169 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 245 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 245 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEE
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEE
Confidence 468999999999999999999988877 8999999999963 689999999999999999999999999999999999
Q ss_pred EEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec-ccCC
Q psy11351 86 MFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF-DHEG 164 (224)
Q Consensus 86 ~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~~~~ 164 (224)
+| ++.++++++.||.|++||+++++....+..|...|.+++| ++.++++++.|+.|++||+++++.+..+ .|..
T Consensus 246 ~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 320 (445)
T 2ovr_B 246 QY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 320 (445)
T ss_dssp EE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCS
T ss_pred EE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcc
Confidence 99 4578999999999999999999888888889999999999 7899999999999999999999988887 4555
Q ss_pred cccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 165 YYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
.+.. +.+ +++++++|+.||.|++||+++++..
T Consensus 321 ~v~~-----~~~---~~~~l~~~~~dg~i~vwd~~~~~~~ 352 (445)
T 2ovr_B 321 LTSG-----MEL---KDNILVSGNADSTVKIWDIKTGQCL 352 (445)
T ss_dssp CEEE-----EEE---ETTEEEEEETTSCEEEEETTTCCEE
T ss_pred cEEE-----EEE---eCCEEEEEeCCCeEEEEECCCCcEE
Confidence 4443 222 4679999999999999999998765
No 114
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=3.3e-30 Score=196.26 Aligned_cols=192 Identities=14% Similarity=0.132 Sum_probs=155.3
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEE--cCCCCcEEEEecCCCEEEEEecCCcccceeeccCC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSV--DPSQDAIFASACDDGRVLLFDTRSREEATELAVNS 79 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 79 (224)
+..+.+++|++++.||.|++||+.+++.+...+|...|.+++| +|++ ++|++++.|+.|++||+++++.+..+..+.
T Consensus 93 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 93 CWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred EECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 4566788999999999999999999998888899999999999 8888 899999999999999999887666554332
Q ss_pred -----------------------------------------cCeEEEEEcCCCCCe----EEEecCCCcEEEEecCCC--
Q psy11351 80 -----------------------------------------GPFHAVMFNPVEARL----VATANSKDGIALYDTRKP-- 112 (224)
Q Consensus 80 -----------------------------------------~~i~~~~~~~~~~~~----l~~~~~dg~v~i~d~~~~-- 112 (224)
..+.++++.+ .... +++++.||.|++||++..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~~~~~~ 250 (368)
T 3mmy_A 172 RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYINPPNP 250 (368)
T ss_dssp CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEEESSCSCH
T ss_pred CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEEecCCCCc
Confidence 2334444444 3333 899999999999999876
Q ss_pred -ceeeEeecCCC------------ceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec-ccCCcccceeeeEEEEeC
Q psy11351 113 -KEVLMQYGSCE------------SCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAG 178 (224)
Q Consensus 113 -~~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 178 (224)
.....+..|.. .|.+++|+|++++|++++.|+.|++||+++++++..+ .|...+.+ ++|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~-----~~~s~ 325 (368)
T 3mmy_A 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISA-----CCFNH 325 (368)
T ss_dssp HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEE-----EEECT
T ss_pred cccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceE-----EEECC
Confidence 34555555554 7999999999999999999999999999999988888 46665554 67777
Q ss_pred CCCeEEEEcCCCCeEEEEeCCCC
Q psy11351 179 TQDEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 179 ~~~~~l~s~~~d~~v~iw~~~~~ 201 (224)
++.+|++++.|+..+.|++...
T Consensus 326 -~g~~l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 326 -NGNIFAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp -TSSCEEEEECCCSTTCGGGCCT
T ss_pred -CCCeEEEEecccccccccccCC
Confidence 7999999999886666665443
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-29 Score=199.75 Aligned_cols=182 Identities=8% Similarity=0.039 Sum_probs=149.7
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccC-----CeeEEEEcCCCCcEEEEecCCCEEEEEecCCccc-----
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHER-----PVYGLSVDPSQDAIFASACDDGRVLLFDTRSREE----- 71 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----- 71 (224)
+.+++|++||+++.||+|++||.+. ++..+.|.. .+.+++|+|+| ++|++|+.||+|+|||+.+++.
T Consensus 92 awSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVkIWd~~~~~l~~~~~ 168 (588)
T 2j04_A 92 KPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQFFSIRKNSENTPEF 168 (588)
T ss_dssp EECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSS-SCEEEEETTSEEEEEECCCCTTTCCCC
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCC-CEEEEEcCCCEEEEEECCCCccccccc
Confidence 5678999999999999999999654 444444544 49999999999 8999999999999999998753
Q ss_pred --ceee----ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCce---eeEee-cCCCceeEEEEcCCCCeEeeee
Q psy11351 72 --ATEL----AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKE---VLMQY-GSCESCMSIRFNKAGTQLLGLR 141 (224)
Q Consensus 72 --~~~~----~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~ 141 (224)
+.++ .+|...|.+++|+| ++ +++++.|+.|++||+...+. ...+. .|...|.+++|+ |+.|++++
T Consensus 169 i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 169 YFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC 243 (588)
T ss_dssp EEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC
T ss_pred eeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe
Confidence 4555 66778999999999 76 77888999999999987763 23443 688899999999 68888887
Q ss_pred cCCCcEEEECCCCCc-ceecccCCcccceeeeEEEE--eCCCCeEEEEcCCCCeEEEEeCC
Q psy11351 142 RRLPPVLYNTRSSSP-VAQFDHEGYYNSCTMKSCCF--AGTQDEYVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 142 ~d~~v~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~s~~~d~~v~iw~~~ 199 (224)
++.|++||+.+++. ...++|...+..+ .| +| ++..++++++||. ++|..+
T Consensus 244 -~~tIkLWd~~~~~~~~~~~gh~~~V~~v-----a~~~s~-d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 244 -PGYVHKIDLKNYSISSLKTGSLENFHII-----PLNHEK-ESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp -SSEEEEEETTTTEEEEEECSCCSCCCEE-----EETTCS-SCEEEEECSSCEE-EEEESS
T ss_pred -CCeEEEEECCCCeEEEEEcCCCceEEEE-----EeeeCC-CCCEEEEEcCCCC-EEEeec
Confidence 68999999998877 4444777777764 44 55 7899999999999 999976
No 116
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.9e-29 Score=218.91 Aligned_cols=192 Identities=18% Similarity=0.249 Sum_probs=168.6
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCC-CcEEEEecCCCEEEEEecCCcccceeeccCC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQ-DAIFASACDDGRVLLFDTRSREEATELAVNS 79 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 79 (224)
+++++++++++++.||+|++||+.+++.+..+ +|...|.+++|+|++ ..++++|+.|+.|++||+++++....+.+|.
T Consensus 664 ~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~ 743 (1249)
T 3sfz_A 664 AFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHT 743 (1249)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCS
T ss_pred EEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCC
Confidence 45678899999999999999999999998887 899999999999953 2689999999999999999999999999999
Q ss_pred cCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEe-----------------------------------------
Q psy11351 80 GPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQ----------------------------------------- 118 (224)
Q Consensus 80 ~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~----------------------------------------- 118 (224)
..|.+++|+| ++.++++++.||.|++||+++++....+
T Consensus 744 ~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~ 822 (1249)
T 3sfz_A 744 NSVNHCRFSP-DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVL 822 (1249)
T ss_dssp SCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEE
T ss_pred CCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEE
Confidence 9999999999 8999999999999999999876433221
Q ss_pred --------------ecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec-ccCCcccceeeeEEEEeCCCCeE
Q psy11351 119 --------------YGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEY 183 (224)
Q Consensus 119 --------------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 183 (224)
.+|...+.+++|+|+++++++++.|+.|++||+.++..+..+ .|.+.+.+ ++|+| ++.+
T Consensus 823 ~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~-----v~~sp-dg~~ 896 (1249)
T 3sfz_A 823 LFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHG-----VMFSP-DGSS 896 (1249)
T ss_dssp EEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEE-----EEECT-TSSE
T ss_pred EEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEE-----EEECC-CCCE
Confidence 146778899999999999999999999999999999888877 56666555 66677 7999
Q ss_pred EEEcCCCCeEEEEeCCC
Q psy11351 184 VVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 184 l~s~~~d~~v~iw~~~~ 200 (224)
|++++.|+.|++|++.+
T Consensus 897 l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 897 FLTASDDQTIRVWETKK 913 (1249)
T ss_dssp EEEEETTSCEEEEEHHH
T ss_pred EEEEeCCCeEEEEEccc
Confidence 99999999999999764
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.1e-29 Score=197.06 Aligned_cols=187 Identities=14% Similarity=0.059 Sum_probs=146.5
Q ss_pred CCCCcceEEEEEeCCCcEE-----------------E----------EeCCCCceee--EEeccCCeeEEEEcCCCCcEE
Q psy11351 2 ASGDPIKVLRVIGNDDHVI-----------------S----------HDMASGDPID--FYLHERPVYGLSVDPSQDAIF 52 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~-----------------i----------wd~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l 52 (224)
+.+++|+++|+++.|++|+ + |++.+++... .+.|...|.+++|+|+| ++|
T Consensus 22 ~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG-~~L 100 (588)
T 2j04_A 22 TWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPID-DWM 100 (588)
T ss_dssp EECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSS-SCE
T ss_pred EECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCC-CEE
Confidence 5678999999999999995 1 2222222111 22567889999999999 899
Q ss_pred EEecCCCEEEEEecCCcccceeeccCCc-----CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCce-------eeEe--
Q psy11351 53 ASACDDGRVLLFDTRSREEATELAVNSG-----PFHAVMFNPVEARLVATANSKDGIALYDTRKPKE-------VLMQ-- 118 (224)
Q Consensus 53 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~-------~~~~-- 118 (224)
|+++.||.|++||... .+..+. |.. .+.+++|+| ++++|++|+.||.|++||+..++. +..+
T Consensus 101 As~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~ 176 (588)
T 2j04_A 101 AVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRL 176 (588)
T ss_dssp EEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEEC
T ss_pred EEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeec
Confidence 9999999999999544 555556 554 599999999 999999999999999999998742 3444
Q ss_pred --ecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcc---eec--ccCCcccceeeeEEEEeCCCCeEEEEcCCCC
Q psy11351 119 --YGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPV---AQF--DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDF 191 (224)
Q Consensus 119 --~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 191 (224)
.+|...|.+++|+|+| +++++.|+.|++||+.+++.. .++ .|...|.+ ++|+ ++.|++++ ++
T Consensus 177 ~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s-----vaFs---g~~LASa~-~~ 245 (588)
T 2j04_A 177 SDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD-----LKIV---DYKVVLTC-PG 245 (588)
T ss_dssp SCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC-----EEEE---TTEEEEEC-SS
T ss_pred ccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE-----EEEE---CCEEEEEe-CC
Confidence 4577899999999999 888899999999999887743 234 35556665 5555 47888887 69
Q ss_pred eEEEEeCCCCCeE
Q psy11351 192 VLYMWRVPRDDIY 204 (224)
Q Consensus 192 ~v~iw~~~~~~~~ 204 (224)
.|++||+.+++..
T Consensus 246 tIkLWd~~~~~~~ 258 (588)
T 2j04_A 246 YVHKIDLKNYSIS 258 (588)
T ss_dssp EEEEEETTTTEEE
T ss_pred eEEEEECCCCeEE
Confidence 9999999998773
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.4e-29 Score=195.43 Aligned_cols=186 Identities=12% Similarity=0.056 Sum_probs=133.5
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceee-EEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccccee----------
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPID-FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATE---------- 74 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~---------- 74 (224)
++++||+|+.|++|+|||+.++.++. .++|...+.+++|+|++.++|++++.|++|++||+++++....
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 57899999999999999998776655 4489999999999999856899999999999999987653221
Q ss_pred ---------------eccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeE------------
Q psy11351 75 ---------------LAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMS------------ 127 (224)
Q Consensus 75 ---------------~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~------------ 127 (224)
..+|...+.++.|.+.++..+++++.|+.+++||++.++....+..+...+..
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 314 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL 314 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc
Confidence 23567788899987448999999999999999999876654444433333322
Q ss_pred ------EEEcC--CCCeEeeeecCCCcEEEECCCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeC
Q psy11351 128 ------IRFNK--AGTQLLGLRRRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRV 198 (224)
Q Consensus 128 ------~~~~~--~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~ 198 (224)
..|+| ++.++++++.|+.|++||+.+++..... .|...|. .++|+| ++++|++++.+| +.+|.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~-----svafsp-dG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 315 FPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIV-----DFCWHQ-DGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp SCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEE-----EEEECT-TSSEEEEEESSE-EEEEEE
T ss_pred cCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEE-----EEEEcC-CCCEEEEEeCCC-eEEEEE
Confidence 23333 2346677888999999999999887766 5666554 477888 799999998776 555554
No 119
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=5.9e-29 Score=190.24 Aligned_cols=183 Identities=13% Similarity=0.091 Sum_probs=141.1
Q ss_pred EEeCCCcEEEEeCCCCceee-EE---------eccCCeeEEEEcCCCCcEEE--EecCCCEEEEEecCCcccceeeccCC
Q psy11351 12 VIGNDDHVISHDMASGDPID-FY---------LHERPVYGLSVDPSQDAIFA--SACDDGRVLLFDTRSREEATELAVNS 79 (224)
Q Consensus 12 ~~~~dg~i~iwd~~~~~~~~-~~---------~~~~~v~~~~~~~~~~~~l~--s~~~d~~i~iwd~~~~~~~~~~~~~~ 79 (224)
+++.|+++|+|++.+.+... .. .+...+.+++|+|+| ++++ +++.|++|+|||+++++++..+. |.
T Consensus 99 s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg-~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~ 176 (365)
T 4h5i_A 99 QGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG-TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TR 176 (365)
T ss_dssp HTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS-SCEEEEESCSSCEEEEEETTTTEEEEEEE-CS
T ss_pred EecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC-CEEEEEECCCCCEEEEeECCCCcEEEEeC-CC
Confidence 34568889999987654221 11 244568999999999 6654 55689999999999999887775 67
Q ss_pred cCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEe--ecCCCceeEEEEcCCCCeEeeeecCC----CcEEEECCC
Q psy11351 80 GPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQ--YGSCESCMSIRFNKAGTQLLGLRRRL----PPVLYNTRS 153 (224)
Q Consensus 80 ~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~----~v~v~d~~~ 153 (224)
..|.+++|+| +++++++++. +.+.+|+..+++..... ..|...+.+++|+|+++++++++.|+ .+++|++..
T Consensus 177 ~~V~~v~fsp-dg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~ 254 (365)
T 4h5i_A 177 GEVKDLHFST-DGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKS 254 (365)
T ss_dssp SCCCEEEECT-TSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEET
T ss_pred CceEEEEEcc-CCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccc
Confidence 8899999999 8999999975 45677777766655433 35788999999999999999998887 478888876
Q ss_pred CCcce----ec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 154 SSPVA----QF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 154 ~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
..... .+ .|...+. .++|+| ++++|++|+.|+.|+|||++++++.
T Consensus 255 ~~~~~~~~~~~~~~~~~V~-----~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 255 GNTSVLRSKQVTNRFKGIT-----SMDVDM-KGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp TEEEEEEEEEEESSCSCEE-----EEEECT-TSCEEEEEETTSCEEEEETTTTEEE
T ss_pred ceecceeeeeecCCCCCeE-----eEEECC-CCCceEEEcCCCEEEEEECCCCcEE
Confidence 54321 22 3445444 467777 7999999999999999999998775
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=5.3e-27 Score=180.53 Aligned_cols=189 Identities=13% Similarity=0.147 Sum_probs=154.7
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEEE
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVM 86 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~ 86 (224)
..++++++.|++|++||+.+++.+..+.+...+.+++|+|++..++++++.|+.|++||+.+++.+..+..+. .+.+++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 3578899999999999999999988886666799999999994445788899999999999999888876655 899999
Q ss_pred EcCCCCCeE-EEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeE-eeeecCCCcEEEECCCCCcceecccCC
Q psy11351 87 FNPVEARLV-ATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQL-LGLRRRLPPVLYNTRSSSPVAQFDHEG 164 (224)
Q Consensus 87 ~~~~~~~~l-~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~v~d~~~~~~~~~~~~~~ 164 (224)
|+| +++++ ++++.++.|++||+.+++....+. +...+.+++|+|+++.+ ++++.++.|++||+++++.+..+....
T Consensus 81 ~sp-dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 158 (391)
T 1l0q_A 81 VSP-DGKQVYVTNMASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158 (391)
T ss_dssp ECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred ECC-CCCEEEEEECCCCEEEEEECCCCeEEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC
Confidence 999 66655 566678999999999887665555 44578999999999977 677789999999999998877774433
Q ss_pred cccceeeeEEEEeCCCCeEE-EEcCCCCeEEEEeCCCCCeE
Q psy11351 165 YYNSCTMKSCCFAGTQDEYV-VSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~l-~s~~~d~~v~iw~~~~~~~~ 204 (224)
.+ ..++|+| +++++ ++++.|+.|++||+.+++..
T Consensus 159 ~~-----~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 159 SP-----KGIAVTP-DGTKVYVANFDSMSISVIDTVTNSVI 193 (391)
T ss_dssp SE-----EEEEECT-TSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred Cc-----ceEEECC-CCCEEEEEeCCCCEEEEEECCCCeEE
Confidence 33 3477888 56555 78889999999999988664
No 121
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=1.5e-27 Score=179.92 Aligned_cols=166 Identities=17% Similarity=0.241 Sum_probs=136.9
Q ss_pred eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc----cceeeccCCcCeEEEEEcCC-CCCeEEEecCCCcEEEEe
Q psy11351 34 LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE----EATELAVNSGPFHAVMFNPV-EARLVATANSKDGIALYD 108 (224)
Q Consensus 34 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~i~d 108 (224)
+|.+.|++++|+|++ ++|++|+.||.|++||++++. ....+.+|...|.+++|+|. ++.+|++++.||.|++||
T Consensus 9 gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred ccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 899999999999998 899999999999999998763 55667889999999999994 389999999999999999
Q ss_pred cCCC---------ceeeEeecCCCceeEEEEcCC--CCeEeeeecCCCcEEEECCCCCcceecc--------------c-
Q psy11351 109 TRKP---------KEVLMQYGSCESCMSIRFNKA--GTQLLGLRRRLPPVLYNTRSSSPVAQFD--------------H- 162 (224)
Q Consensus 109 ~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~v~d~~~~~~~~~~~--------------~- 162 (224)
++++ +....+..|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+. +
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHL 167 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCS
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcc
Confidence 9876 345666689999999999999 9999999999999999998765432210 0
Q ss_pred ---------------------------------CCc--------ccceeeeEEEEeCCCC----eEEEEcCCCCeEEEEe
Q psy11351 163 ---------------------------------EGY--------YNSCTMKSCCFAGTQD----EYVVSGSDDFVLYMWR 197 (224)
Q Consensus 163 ---------------------------------~~~--------~~~~~~~~~~~~~~~~----~~l~s~~~d~~v~iw~ 197 (224)
.+. -..-.+..++|+| ++ ++|++++.||.|++||
T Consensus 168 ~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~~~~~l~s~~~dg~i~iwd 246 (351)
T 3f3f_A 168 QSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-SIGRWYQLIATGCKDGRIRIFK 246 (351)
T ss_dssp CCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC-CSSCSSEEEEEEETTSCEEEEE
T ss_pred cceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC-CCCCcceEEEEEcCCCeEEEEe
Confidence 000 0111245678888 55 8999999999999999
Q ss_pred CCCC
Q psy11351 198 VPRD 201 (224)
Q Consensus 198 ~~~~ 201 (224)
++++
T Consensus 247 ~~~~ 250 (351)
T 3f3f_A 247 ITEK 250 (351)
T ss_dssp EEEC
T ss_pred CCCC
Confidence 9875
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=6.5e-27 Score=180.03 Aligned_cols=194 Identities=12% Similarity=0.103 Sum_probs=157.0
Q ss_pred CCCCcceEE-EEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVL-RVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+.+..++++ ++++.|++|++||+.+++.+..+.+...+.+++|+|++..++++++.++.|++||+.+++.+..+..+ .
T Consensus 38 ~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~ 116 (391)
T 1l0q_A 38 VISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-K 116 (391)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-S
T ss_pred EECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-C
Confidence 456677765 67779999999999999998888666699999999999444567778899999999999887777654 4
Q ss_pred CeEEEEEcCCCCCeE-EEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeE-eeeecCCCcEEEECCCCCcce
Q psy11351 81 PFHAVMFNPVEARLV-ATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQL-LGLRRRLPPVLYNTRSSSPVA 158 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l-~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~v~d~~~~~~~~ 158 (224)
.+.+++|+| +++.+ ++++.++.|++||+++++....+..+ ..+.+++|+|+++++ ++++.++.|++||+++++...
T Consensus 117 ~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 117 SPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 689999999 66655 78888999999999988766665544 567999999999987 566778999999999988877
Q ss_pred ecccCCcccceeeeEEEEeCCCCeEEEEcC---CCCeEEEEeCCCCCeE
Q psy11351 159 QFDHEGYYNSCTMKSCCFAGTQDEYVVSGS---DDFVLYMWRVPRDDIY 204 (224)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~---~d~~v~iw~~~~~~~~ 204 (224)
.+.+...+. .++|+| +++++++++ .++.|++||+.+++..
T Consensus 195 ~~~~~~~~~-----~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 195 TVKVEAAPS-----GIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp EEECSSEEE-----EEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred EEecCCCcc-----ceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 775544433 467777 677777776 6899999999988664
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=3.2e-27 Score=184.07 Aligned_cols=195 Identities=13% Similarity=0.135 Sum_probs=160.3
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE------eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY------LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATEL 75 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 75 (224)
+.++.+.++++++.|++|++||+.+++..... +|...|.+++|+|++ .++++++.|+.|++||+++++.+..+
T Consensus 129 ~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~~~~~~~ 207 (433)
T 3bws_A 129 RFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLKTLAYKATV 207 (433)
T ss_dssp EESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTTCCEEEEE
T ss_pred EEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCC-EEEEEECCCCEEEEEECCCceEEEEE
Confidence 34456678888888999999999999887632 678899999999998 89999999999999999999988888
Q ss_pred ccCCcCeEEEEEcCCCCCeE-EEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeee--------cCCCc
Q psy11351 76 AVNSGPFHAVMFNPVEARLV-ATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLR--------RRLPP 146 (224)
Q Consensus 76 ~~~~~~i~~~~~~~~~~~~l-~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~v 146 (224)
..|...+.+++|+| ++..+ ++++.++.|++||+++++....+. ....+.+++|+|+++++++++ .|+.|
T Consensus 208 ~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i 285 (433)
T 3bws_A 208 DLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKTD-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRL 285 (433)
T ss_dssp ECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEECC-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEE
T ss_pred cCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEec-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeE
Confidence 88889999999999 66655 566689999999999886655544 455689999999999999887 47889
Q ss_pred EEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 147 VLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
++||+++++.+..+.+...+ ..++|+|....++++++.|+.|++||+.+++..
T Consensus 286 ~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 286 GIYSMDKEKLIDTIGPPGNK-----RHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ 338 (433)
T ss_dssp EEEETTTTEEEEEEEEEECE-----EEEEECSSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEECCCCcEEeeccCCCCc-----ceEEECCCCCEEEEEecCCCEEEEEECCCCcEE
Confidence 99999998877766544433 347788843356788899999999999988664
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=3.7e-27 Score=175.03 Aligned_cols=142 Identities=9% Similarity=0.108 Sum_probs=114.8
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEE-ec---cCCeeEEEEcCCCCcEE------------EEecCCCEEEEEecCCc
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFY-LH---ERPVYGLSVDPSQDAIF------------ASACDDGRVLLFDTRSR 69 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~---~~~v~~~~~~~~~~~~l------------~s~~~d~~i~iwd~~~~ 69 (224)
.+++|++++.|++|+|||++++++++.+ +| ...+.+++|+|++ .++ ++|+.|++|++||..++
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG-~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMG-LLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETT-EEEEEEC------------CCEEEEEEETTTT
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCC-CEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 5678999999999999999999999888 33 3467788999998 665 67889999999999999
Q ss_pred ccceee-----ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCcee-EEEEcCCCCeEeeeecC
Q psy11351 70 EEATEL-----AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCM-SIRFNKAGTQLLGLRRR 143 (224)
Q Consensus 70 ~~~~~~-----~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d 143 (224)
+.+..+ .+|...+.+..+ ++.++++++.|++|+|||+++++.+..+.+|...+. +++|+|+|++|++|+.|
T Consensus 271 k~l~v~~~~~p~Gh~~~~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D 347 (356)
T 2w18_A 271 LSVGVMLYCLPPGQAGRFLEGDV---KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKD 347 (356)
T ss_dssp EEEEEEEECCCTTCCCCEEEEEE---ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTT
T ss_pred EEEEEEEeeccCCCcceeEcccc---CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECC
Confidence 876554 356655544444 367899999999999999999998888888877655 68999999999999999
Q ss_pred CCcEEEEC
Q psy11351 144 LPPVLYNT 151 (224)
Q Consensus 144 ~~v~v~d~ 151 (224)
++|++||+
T Consensus 348 ~TIklWd~ 355 (356)
T 2w18_A 348 GNIFVYHY 355 (356)
T ss_dssp SCEEEEEE
T ss_pred CcEEEecC
Confidence 99999985
No 125
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.95 E-value=1.1e-26 Score=181.30 Aligned_cols=196 Identities=15% Similarity=0.126 Sum_probs=148.2
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCC-----------c-----eeeEEeccCCeeEEEEcCCCCcEEE----EecCCCEE
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASG-----------D-----PIDFYLHERPVYGLSVDPSQDAIFA----SACDDGRV 61 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~-----------~-----~~~~~~~~~~v~~~~~~~~~~~~l~----s~~~d~~i 61 (224)
|++..+.++++++.|+ +++|+.... . ....+.+...|++++|+|++ ++|+ +|+.|+.|
T Consensus 43 avs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~lav~~~sgs~d~~v 120 (434)
T 2oit_A 43 AVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN-LTLSACMMSSEYGSII 120 (434)
T ss_dssp EEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS-CEEEEEEEETTTEEEE
T ss_pred EEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC-CEEEEEEeccCCCceE
Confidence 4556677889998887 999875311 1 11223567789999999998 7888 89999999
Q ss_pred EEEecCCc--------cc---ceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEE
Q psy11351 62 LLFDTRSR--------EE---ATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRF 130 (224)
Q Consensus 62 ~iwd~~~~--------~~---~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~ 130 (224)
++||++++ ++ ...+.+|...|.+++|+|.++.+|++++.||.|++||++++........|...|.+++|
T Consensus 121 ~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~w 200 (434)
T 2oit_A 121 AFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCW 200 (434)
T ss_dssp EEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEE
T ss_pred EEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEE
Confidence 99999765 22 34556789999999999954899999999999999999988766666678899999999
Q ss_pred cCCCCeEeeeecCCCcEEEECCCCCcceecc-cCCc--ccceeeeEEEEeCCCCeEEEE-cCCCC------eEEEEeCCC
Q psy11351 131 NKAGTQLLGLRRRLPPVLYNTRSSSPVAQFD-HEGY--YNSCTMKSCCFAGTQDEYVVS-GSDDF------VLYMWRVPR 200 (224)
Q Consensus 131 ~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~l~s-~~~d~------~v~iw~~~~ 200 (224)
+|+|++|++++.|+.|++||++ ++....+. +... -....+..++|++ ++.++++ .+.|| .+++|++.+
T Consensus 201 spdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 201 SPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG-TYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp CTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE-TTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred cCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec-CceEEEEEccCCCccCCCCceEEEEecc
Confidence 9999999999999999999998 55554442 2110 0123455678887 5666643 33332 489999986
Q ss_pred C
Q psy11351 201 D 201 (224)
Q Consensus 201 ~ 201 (224)
.
T Consensus 279 ~ 279 (434)
T 2oit_A 279 K 279 (434)
T ss_dssp T
T ss_pred C
Confidence 5
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=4.4e-26 Score=177.63 Aligned_cols=193 Identities=11% Similarity=0.082 Sum_probs=156.6
Q ss_pred CCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcC
Q psy11351 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP 81 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 81 (224)
..+.++++++++.|+.|++||+++++.+..+ .|...+.+++|+|++..++++++.|+.|++||+++++.+..+..+ ..
T Consensus 177 ~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~ 255 (433)
T 3bws_A 177 IPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GL 255 (433)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SE
T ss_pred EcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CC
Confidence 3556789999999999999999999888777 688999999999998444467778999999999999887777654 45
Q ss_pred eEEEEEcCCCCCeEEEec--------CCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeE-eeeecCCCcEEEECC
Q psy11351 82 FHAVMFNPVEARLVATAN--------SKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQL-LGLRRRLPPVLYNTR 152 (224)
Q Consensus 82 i~~~~~~~~~~~~l~~~~--------~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~v~d~~ 152 (224)
+.+++|+| +++.+++++ .|+.|++||+++++.... ..+...+.+++|+|+++.+ ++++.++.|++||++
T Consensus 256 ~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 256 PRGLLLSK-DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp EEEEEECT-TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETT
T ss_pred ceEEEEcC-CCCEEEEEECCCCccccCCCeEEEEECCCCcEEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECC
Confidence 89999999 788888877 588999999998865444 3455688999999999765 555889999999999
Q ss_pred CCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCC---------------CCeEEEEeCCCCCeE
Q psy11351 153 SSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSD---------------DFVLYMWRVPRDDIY 204 (224)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~---------------d~~v~iw~~~~~~~~ 204 (224)
+++.+..+.+...+. .++|+| +++++++++. ||.|++||+.+++..
T Consensus 334 ~~~~~~~~~~~~~~~-----~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 334 EKKVQKSIPVFDKPN-----TIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp TTEEEEEEECSSSEE-----EEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred CCcEEEEecCCCCCC-----eEEEcC-CCCEEEEEecCCCccccccccccccceEEEEEECCCCcEE
Confidence 988877776555443 477777 6777776655 579999999988764
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=5.6e-24 Score=165.27 Aligned_cols=188 Identities=8% Similarity=0.004 Sum_probs=145.4
Q ss_pred ceEEEEEeCC------CcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCC---EEEEEecCCcccceeecc
Q psy11351 7 IKVLRVIGND------DHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDG---RVLLFDTRSREEATELAV 77 (224)
Q Consensus 7 ~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~ 77 (224)
+..++.++.+ ++|++||+..+......+|...+.+++|+|++ +.|++++.++ .|++||+++++.. .+..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~ 220 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGAVR-QVAS 220 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCEE-EEEC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCcEE-Eeec
Confidence 4556666554 79999999876655555899999999999999 7888888775 9999999988764 5667
Q ss_pred CCcCeEEEEEcCCCCCeEE-EecCCCc--EEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec-CC--CcEEEEC
Q psy11351 78 NSGPFHAVMFNPVEARLVA-TANSKDG--IALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR-RL--PPVLYNT 151 (224)
Q Consensus 78 ~~~~i~~~~~~~~~~~~l~-~~~~dg~--v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~v~v~d~ 151 (224)
|...+.+++|+| +++.|+ +++.++. |++||+++++. ..+..+...+.+++|+|+|++|++++. ++ .|++||+
T Consensus 221 ~~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 221 FPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI 298 (415)
T ss_dssp CSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred CCCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC
Confidence 788899999999 777666 6666655 99999988754 566678889999999999999988875 44 4777788
Q ss_pred CCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCC---CeEEEEeCCCCCeE
Q psy11351 152 RSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDD---FVLYMWRVPRDDIY 204 (224)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d---~~v~iw~~~~~~~~ 204 (224)
.+++......+... ...++|+| ++++|+.++.+ ..|++||+.+++..
T Consensus 299 ~~~~~~~l~~~~~~-----~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 299 NGGAPQRITWEGSQ-----NQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQ 348 (415)
T ss_dssp TSSCCEECCCSSSE-----EEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred CCCCEEEEecCCCc-----ccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCEE
Confidence 87764332233332 33478888 68888877654 68999999988763
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=4.2e-24 Score=165.97 Aligned_cols=191 Identities=9% Similarity=0.009 Sum_probs=149.8
Q ss_pred CCCCcceEEEEEeCCC---cEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEE-EecCCC--EEEEEecCCcccceee
Q psy11351 2 ASGDPIKVLRVIGNDD---HVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFA-SACDDG--RVLLFDTRSREEATEL 75 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~d~--~i~iwd~~~~~~~~~~ 75 (224)
+.+++|++|++++.|+ .|++||+.+++......|...+.+++|+|++ +.|+ +++.++ .|++||+++++. ..+
T Consensus 185 ~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg-~~la~~~~~~g~~~i~~~d~~~~~~-~~l 262 (415)
T 2hqs_A 185 AWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDG-SKLAFALSKTGSLNLYVMDLASGQI-RQV 262 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCE-EEC
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCC-CEEEEEEecCCCceEEEEECCCCCE-EeC
Confidence 4567889999999885 9999999999887766888999999999999 5555 776655 499999988765 566
Q ss_pred ccCCcCeEEEEEcCCCCCeEEEecC-CC--cEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecC---CCcEEE
Q psy11351 76 AVNSGPFHAVMFNPVEARLVATANS-KD--GIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRR---LPPVLY 149 (224)
Q Consensus 76 ~~~~~~i~~~~~~~~~~~~l~~~~~-dg--~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~v~ 149 (224)
..|...+.+++|+| +++.|+.++. ++ .|.+||+.+++ ...+..+...+.+++|+|+|++|++++.+ ..|++|
T Consensus 263 ~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 263 TDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred cCCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEE
Confidence 77888999999999 7887777765 45 57777988764 34455567789999999999999988764 579999
Q ss_pred ECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCC---eEEEEeCCCCCe
Q psy11351 150 NTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDF---VLYMWRVPRDDI 203 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~---~v~iw~~~~~~~ 203 (224)
|+.+++......+ .. ...++|+| ++++|++++.++ .|++||+..+..
T Consensus 341 d~~~~~~~~l~~~-~~-----~~~~~~sp-dg~~l~~~s~~~~~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 341 DLATGGVQVLSST-FL-----DETPSLAP-NGTMVIYSSSQGMGSVLNLVSTDGRFK 390 (415)
T ss_dssp ETTTCCEEECCCS-SS-----CEEEEECT-TSSEEEEEEEETTEEEEEEEETTSCCE
T ss_pred ECCCCCEEEecCC-CC-----cCCeEEcC-CCCEEEEEEcCCCccEEEEEECCCCcE
Confidence 9998876432233 22 34478888 688888887776 899999986544
No 129
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.93 E-value=1.8e-24 Score=161.63 Aligned_cols=151 Identities=13% Similarity=0.165 Sum_probs=127.0
Q ss_pred CCCcceEEEEEeCCCcEEEEeCCCCceee-----EEeccCCeeEEEEcCCCCcEE--EEecCCCEEEEEecCCcccceee
Q psy11351 3 SGDPIKVLRVIGNDDHVISHDMASGDPID-----FYLHERPVYGLSVDPSQDAIF--ASACDDGRVLLFDTRSREEATEL 75 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~l--~s~~~d~~i~iwd~~~~~~~~~~ 75 (224)
....++++++++.||+|++||+.+++... ...+.+.|.++.++|.+...+ ++++.+++|++||.+........
T Consensus 158 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~ 237 (318)
T 4ggc_A 158 WAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 237 (318)
T ss_dssp ECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE
T ss_pred EcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc
Confidence 35667899999999999999998876432 226888999999999876654 56788999999999887755444
Q ss_pred ccCCcCeEEEEEcCCCCCeEEEe--cCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCC
Q psy11351 76 AVNSGPFHAVMFNPVEARLVATA--NSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 76 ~~~~~~i~~~~~~~~~~~~l~~~--~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~ 153 (224)
.+...+..+.|+| .+..++++ +.|+.|++||+++++.+..+.+|.+.|++++|+|++++|++++.|++|++||+.+
T Consensus 238 -~~~~~v~~~~~~~-~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 238 -DAHSQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp -ECSSCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred -cceeeeeeeeecc-cccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 4567799999999 66655543 4799999999999999999999999999999999999999999999999999976
Q ss_pred CC
Q psy11351 154 SS 155 (224)
Q Consensus 154 ~~ 155 (224)
..
T Consensus 316 ~d 317 (318)
T 4ggc_A 316 LD 317 (318)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=5.7e-22 Score=150.24 Aligned_cols=201 Identities=9% Similarity=0.069 Sum_probs=153.8
Q ss_pred CCCCcceEEEEEeC-------CCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccccee
Q psy11351 2 ASGDPIKVLRVIGN-------DDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATE 74 (224)
Q Consensus 2 a~~~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 74 (224)
+.+..++++++++. ++.|.+||..+++.+..+.....+..++|+|++..++++...++.|.+||..+++.+..
T Consensus 47 ~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~ 126 (353)
T 3vgz_A 47 AYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGR 126 (353)
T ss_dssp EEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEE
Confidence 34566777776663 56899999999998888876677899999999944667777789999999999987777
Q ss_pred eccCCcC---------eEEEEEcCCCCCeEEEec--CCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecC
Q psy11351 75 LAVNSGP---------FHAVMFNPVEARLVATAN--SKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRR 143 (224)
Q Consensus 75 ~~~~~~~---------i~~~~~~~~~~~~l~~~~--~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 143 (224)
+..+... +.+++|+| +++.+++++ .++.|.+||+.+++....+..+...+..++|+|+++++++++.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 205 (353)
T 3vgz_A 127 LVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNAD 205 (353)
T ss_dssp EESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTT
T ss_pred EecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCC
Confidence 7654322 68899999 666665554 57889999999887766665466668899999999999999999
Q ss_pred CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeE-EEEcCCCCeEEEEeCCCCCeE
Q psy11351 144 LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEY-VVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 144 ~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+.+.+||+.+++....+.....-.......++|+| ++++ +++...++.|.+||+.+++..
T Consensus 206 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 206 GELITIDTADNKILSRKKLLDDGKEHFFINISLDT-ARQRAFITDSKAAEVLVVDTRNGNIL 266 (353)
T ss_dssp SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET-TTTEEEEEESSSSEEEEEETTTCCEE
T ss_pred CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 99999999999887776321110111234578888 4654 555556699999999998764
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=2.8e-22 Score=160.41 Aligned_cols=192 Identities=8% Similarity=0.066 Sum_probs=152.3
Q ss_pred CCCCcceEEEEEeCCCcEEEEeC--CCCceeeEEeccCCeeEEEEcC----CCCcEEEEec-CCCEEEEEecCCccccee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDM--ASGDPIDFYLHERPVYGLSVDP----SQDAIFASAC-DDGRVLLFDTRSREEATE 74 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~s~~-~d~~i~iwd~~~~~~~~~ 74 (224)
+++.++++|++++.|++|++||+ .+++.+..+.+...+..++|+| ++ +++++++ .+++|.+||..+++++..
T Consensus 185 ~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~~~ 263 (543)
T 1nir_A 185 RMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPKQI 263 (543)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEEEE
T ss_pred EECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEecccccccee
Confidence 56788999999999999999999 8888888777777889999999 98 7777776 589999999999988777
Q ss_pred ecc----------CC-cCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceee-EeecCCCceeEEEEcCCCCeEeeee-
Q psy11351 75 LAV----------NS-GPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVL-MQYGSCESCMSIRFNKAGTQLLGLR- 141 (224)
Q Consensus 75 ~~~----------~~-~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~- 141 (224)
+.. |. ..+..+.++|++..++++...++.|.+||+.+.+.+. ....+...+..+.|+|+|+++++++
T Consensus 264 i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~ 343 (543)
T 1nir_A 264 VSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAAN 343 (543)
T ss_dssp EECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEG
T ss_pred ecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEec
Confidence 754 22 2789999999667778888899999999998765443 1224566788999999999877654
Q ss_pred cCCCcEEEECCCCCcceecc-----cCCcccceeeeEEEEeCCCCeEEEEcC-CCCeEEEEeCCC
Q psy11351 142 RRLPPVLYNTRSSSPVAQFD-----HEGYYNSCTMKSCCFAGTQDEYVVSGS-DDFVLYMWRVPR 200 (224)
Q Consensus 142 ~d~~v~v~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~v~iw~~~~ 200 (224)
.+++|.+||+.+++.+..+. |.+. ...+ ++|..+.+++++. .|++|.+||+.+
T Consensus 344 ~~~~v~v~D~~tg~l~~~i~~g~~ph~g~--g~~~----~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 344 NSNKVAVIDSKDRRLSALVDVGKTPHPGR--GANF----VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp GGTEEEEEETTTTEEEEEEECSSSBCCTT--CEEE----EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCeEEEEECCCCeEEEeeccCCCCCCCC--Cccc----CCCCCccEEEeccCCCceEEEEEeCC
Confidence 57899999999998887763 2221 1111 3564477788875 689999999988
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=5.2e-21 Score=143.94 Aligned_cols=191 Identities=8% Similarity=0.018 Sum_probs=142.7
Q ss_pred CCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccc-ceeeccCCcC
Q psy11351 4 GDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREE-ATELAVNSGP 81 (224)
Q Consensus 4 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~ 81 (224)
...+..+++++.+++|++||..+++.+... .+...+ .++|+|++..+++++..++.|.+||..+++. ...+..+..+
T Consensus 7 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 85 (331)
T 3u4y_A 7 TTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS 85 (331)
T ss_dssp CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC
T ss_pred CCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCC
Confidence 345567889999999999999999988776 344556 9999999943555555589999999999887 6667666666
Q ss_pred eEEEEEcCCCCCeEEEecCCC---cEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeee-cCCC-cEEEECCCCCc
Q psy11351 82 FHAVMFNPVEARLVATANSKD---GIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLR-RRLP-PVLYNTRSSSP 156 (224)
Q Consensus 82 i~~~~~~~~~~~~l~~~~~dg---~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~-v~v~d~~~~~~ 156 (224)
..+++|+| ++++++++..++ .|.+||+.+++....+. .......++|+|+|+++++++ .++. +.+|++.....
T Consensus 86 ~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~ 163 (331)
T 3u4y_A 86 MADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGV 163 (331)
T ss_dssp CCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCC
T ss_pred ccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCc
Confidence 66699999 888888665553 89999999887655544 345568999999998776654 4588 99999876443
Q ss_pred cee-----cccCCcccceeeeEEEEeCCCCe-EEEEcCCCCeEEEEeCCCCCe
Q psy11351 157 VAQ-----FDHEGYYNSCTMKSCCFAGTQDE-YVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 157 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~v~iw~~~~~~~ 203 (224)
+.. +..... ...++|+| +++ +++++..++.|++||+.+++.
T Consensus 164 ~~~~~~~~~~~~~~-----~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 164 LFDTGQEFISGGTR-----PFNITFTP-DGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEEEEEEEECSSSS-----EEEEEECT-TSSEEEEEETTTTEEEEEECSSTTS
T ss_pred EeecCCccccCCCC-----ccceEECC-CCCEEEEEeCCCCeEEEEECCCCcc
Confidence 321 111122 34578888 576 556667799999999998876
No 133
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=1.1e-22 Score=158.70 Aligned_cols=151 Identities=10% Similarity=0.051 Sum_probs=120.6
Q ss_pred CCCCcceEEE----EEeCCCcEEEEeCCCC--------ce---eeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEe
Q psy11351 2 ASGDPIKVLR----VIGNDDHVISHDMASG--------DP---IDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFD 65 (224)
Q Consensus 2 a~~~~~~~l~----~~~~dg~i~iwd~~~~--------~~---~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 65 (224)
+.+..+++|+ +|+.|++|+|||+.++ ++ +..+ +|...|.+++|+|++.++|++++.||+|++||
T Consensus 99 ~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD 178 (434)
T 2oit_A 99 ALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQ 178 (434)
T ss_dssp EECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred EEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEE
Confidence 4566788888 7889999999998654 22 2222 69999999999998448999999999999999
Q ss_pred cCCcccceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecC-------CCceeEEEEcCCCCeEe
Q psy11351 66 TRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGS-------CESCMSIRFNKAGTQLL 138 (224)
Q Consensus 66 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~ 138 (224)
++++........|...|.+++|+| ++++|++|+.||.|++||++ ++....+..+ ...+.+++|++++.+++
T Consensus 179 ~~~~~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~ 256 (434)
T 2oit_A 179 VTETVKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAI 256 (434)
T ss_dssp ESSSEEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEE
T ss_pred cCCCcceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEE
Confidence 999876666677888999999999 89999999999999999998 4444444332 23899999999888776
Q ss_pred eee-cCCC------cEEEECCCC
Q psy11351 139 GLR-RRLP------PVLYNTRSS 154 (224)
Q Consensus 139 ~~~-~d~~------v~v~d~~~~ 154 (224)
+.+ .+|. +++|++++.
T Consensus 257 ~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 257 VYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEETTCCSSSCCEEEEEECCCT
T ss_pred EEccCCCccCCCCceEEEEeccC
Confidence 533 3432 889999865
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=4.2e-21 Score=145.47 Aligned_cols=194 Identities=10% Similarity=0.056 Sum_probs=149.6
Q ss_pred CCCCcce-EEEEEeCCCcEEEEeCCCCceeeEEec-c-C--------CeeEEEEcCCCCcEEEEec--CCCEEEEEecCC
Q psy11351 2 ASGDPIK-VLRVIGNDDHVISHDMASGDPIDFYLH-E-R--------PVYGLSVDPSQDAIFASAC--DDGRVLLFDTRS 68 (224)
Q Consensus 2 a~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~-~-~--------~v~~~~~~~~~~~~l~s~~--~d~~i~iwd~~~ 68 (224)
+.+.+++ ++++...++.|.+||.++++.+..+.. . . .+.+++|+|++ +.+++++ .++.|.+||..+
T Consensus 95 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 95 TINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDAT-NTVYISGIGKESVIWVVDGGN 173 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTT-TEEEEEEESSSCEEEEEETTT
T ss_pred EECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCC-CEEEEEecCCCceEEEEcCCC
Confidence 3455666 455566689999999999998777632 2 1 27899999998 5555443 588999999999
Q ss_pred cccceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec----CCCceeEEEEcCCCCeEeeeec-C
Q psy11351 69 REEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG----SCESCMSIRFNKAGTQLLGLRR-R 143 (224)
Q Consensus 69 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-d 143 (224)
++.+..+..+...+..++|+| +++.+++++.++.+.+||+.+++....+.. +...+..++|+|+++++++++. +
T Consensus 174 ~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 252 (353)
T 3vgz_A 174 IKLKTAIQNTGKMSTGLALDS-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA 252 (353)
T ss_dssp TEEEEEECCCCTTCCCCEEET-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS
T ss_pred CceEEEecCCCCccceEEECC-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC
Confidence 988877765566688999999 888888888899999999999877665553 4556788999999998777665 4
Q ss_pred CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCe-EEEEcCCCCeEEEEeCCCCCeE
Q psy11351 144 LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE-YVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 144 ~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+.|.+||+.+++.+..+..... . .++|+| +++ ++++...++.|.+||..+++..
T Consensus 253 ~~v~~~d~~~~~~~~~~~~~~~-~-----~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 253 AEVLVVDTRNGNILAKVAAPES-L-----AVLFNP-ARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp SEEEEEETTTCCEEEEEECSSC-C-----CEEEET-TTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CEEEEEECCCCcEEEEEEcCCC-c-----eEEECC-CCCEEEEEECCCCeEEEEECCCCeEE
Confidence 8899999999988777743222 2 267777 565 5666668999999999988764
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=1.7e-21 Score=146.62 Aligned_cols=190 Identities=11% Similarity=0.108 Sum_probs=144.1
Q ss_pred CCCCcceE-EEEEeCCCcEEEEeCCCCceeeEEecc------CCeeEEEEcCCCCcEEEEec------------CCCEEE
Q psy11351 2 ASGDPIKV-LRVIGNDDHVISHDMASGDPIDFYLHE------RPVYGLSVDPSQDAIFASAC------------DDGRVL 62 (224)
Q Consensus 2 a~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~------~~v~~~~~~~~~~~~l~s~~------------~d~~i~ 62 (224)
+.++++++ ++++..++.|.+||+.+++.+..+... ..+.+++|+|++ +.++++. .++.|.
T Consensus 40 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~ 118 (337)
T 1pby_B 40 MVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVA 118 (337)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEE
T ss_pred EEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCC-CEEEEEecccccccccccccCceEE
Confidence 44566755 456667889999999999887766432 278899999998 6777775 579999
Q ss_pred EEecCCcccceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecC---------------------
Q psy11351 63 LFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGS--------------------- 121 (224)
Q Consensus 63 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~--------------------- 121 (224)
+||+.+++.+..+.. ...+..++|+| ++++++++ ++.|.+||+.+++....+..+
T Consensus 119 v~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 194 (337)
T 1pby_B 119 LYDAETLSRRKAFEA-PRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHES 194 (337)
T ss_dssp EEETTTTEEEEEEEC-CSSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTT
T ss_pred EEECCCCcEEEEEeC-CCCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccC
Confidence 999998887766654 44578899999 77777776 578999999877544332211
Q ss_pred ---------------------------------------------CCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCc
Q psy11351 122 ---------------------------------------------CESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSP 156 (224)
Q Consensus 122 ---------------------------------------------~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~ 156 (224)
...+.+++|+|++++++++ ++.|++||+.+++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~ 272 (337)
T 1pby_B 195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNAS 272 (337)
T ss_dssp TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEE
T ss_pred CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcC
Confidence 1234468999999999888 68899999999888
Q ss_pred ceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 157 VAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+..+.....+. .++|+| ++++|++++.++.|++||+.+++..
T Consensus 273 ~~~~~~~~~~~-----~~~~s~-dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 273 IKRVPLPHSYY-----SVNVST-DGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp EEEEECSSCCC-----EEEECT-TSCEEEEESBSSEEEEEETTTCCEE
T ss_pred cceecCCCcee-----eEEECC-CCCEEEEEcCCCcEEEEECcCCcEE
Confidence 77764433333 367777 6888888888999999999998775
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=4.9e-21 Score=153.27 Aligned_cols=193 Identities=9% Similarity=0.064 Sum_probs=150.0
Q ss_pred CCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEec--CCcccceeeccCCc
Q psy11351 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDT--RSREEATELAVNSG 80 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~--~~~~~~~~~~~~~~ 80 (224)
.+..+.++++++.|++|.+||..+++++..+.....+..++|+|++ ++|++++.|++|.+||+ .+++.+..+.. ..
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~ 222 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GI 222 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEEEEEEEC-CS
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCC-CEEEEECCCCeEEEEECcCCCCcEEEEEec-CC
Confidence 3456788999999999999999999998888533348999999999 89999999999999999 78888777764 44
Q ss_pred CeEEEEEcC----CCCCeEEEec-CCCcEEEEecCCCceeeEeecC-----------CCceeEEEEcCCCCe-EeeeecC
Q psy11351 81 PFHAVMFNP----VEARLVATAN-SKDGIALYDTRKPKEVLMQYGS-----------CESCMSIRFNKAGTQ-LLGLRRR 143 (224)
Q Consensus 81 ~i~~~~~~~----~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~-l~~~~~d 143 (224)
....++|+| ++ +++++++ .++.|.+||..+.+.+..+..+ ...+..+.++|++.. +++...+
T Consensus 223 ~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~ 301 (543)
T 1nir_A 223 EARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 301 (543)
T ss_dssp EEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CcceEEeCCCcCCCC-CEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC
Confidence 579999998 54 5566655 5899999999998877665531 237889999998765 4556678
Q ss_pred CCcEEEECCCCCcce--ecccCCcccceeeeEEEEeCCCCeEEE-EcCCCCeEEEEeCCCCCeE
Q psy11351 144 LPPVLYNTRSSSPVA--QFDHEGYYNSCTMKSCCFAGTQDEYVV-SGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 144 ~~v~v~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~v~iw~~~~~~~~ 204 (224)
+.|.+||+.+.+.+. .+.+...... +.|+| ++++++ ++..+++|.+||..++++.
T Consensus 302 g~i~vvd~~~~~~l~~~~i~~~~~~~~-----~~~sp-dg~~l~va~~~~~~v~v~D~~tg~l~ 359 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIGAAPFLHD-----GGWDS-SHRYFMTAANNSNKVAVIDSKDRRLS 359 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEECCSSCCC-----EEECT-TSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred CeEEEEEecCCCcceeEEeccCcCccC-----ceECC-CCCEEEEEecCCCeEEEEECCCCeEE
Confidence 999999998876554 3333333333 56777 677654 5566899999999999764
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=4e-21 Score=144.54 Aligned_cols=149 Identities=12% Similarity=0.148 Sum_probs=119.7
Q ss_pred eEEEEEeCCCcEEEEeCCCCceeeEEeccC---CeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccC-----C
Q psy11351 8 KVLRVIGNDDHVISHDMASGDPIDFYLHER---PVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVN-----S 79 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----~ 79 (224)
+++++++.+++|++||+.+++.+..+.... .+..++|+|++..+++++..++.|.+||+.+++.+..+... .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 589999999999999999999888775555 68999999998555677788899999999998877666431 1
Q ss_pred cCeEEEEEcCCCCCeEEEec------------CCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcE
Q psy11351 80 GPFHAVMFNPVEARLVATAN------------SKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPV 147 (224)
Q Consensus 80 ~~i~~~~~~~~~~~~l~~~~------------~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 147 (224)
..+..++|+| +++++++++ .++.|.+||+.+++....+.. ...+..++|+|++++|+++ ++.|+
T Consensus 82 ~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~ 157 (337)
T 1pby_B 82 KSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLH 157 (337)
T ss_dssp ECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEE
T ss_pred ccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEE
Confidence 2567899999 887887775 579999999998766555443 4567889999999988887 67899
Q ss_pred EEECCCCCcceec
Q psy11351 148 LYNTRSSSPVAQF 160 (224)
Q Consensus 148 v~d~~~~~~~~~~ 160 (224)
+||+.+++....+
T Consensus 158 ~~d~~~~~~~~~~ 170 (337)
T 1pby_B 158 VMDPEAGTLVEDK 170 (337)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEECCCCcEeeee
Confidence 9999887665444
No 138
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=5.7e-21 Score=144.44 Aligned_cols=156 Identities=10% Similarity=0.076 Sum_probs=120.2
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccC--CeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccC
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHER--PVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVN 78 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 78 (224)
+|....+.++++++.+++|++||+.+++.+..+.... .+..++|+|++..++++...++.|.+||+.+++....+...
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 3566778899999999999999999998887774444 68899999998445667778999999999988877666532
Q ss_pred C------cCeEEEEEcCCCCCeEEEecCC------------CcEEEEecCCCceee--EeecCCCceeEEEEcCCCCeEe
Q psy11351 79 S------GPFHAVMFNPVEARLVATANSK------------DGIALYDTRKPKEVL--MQYGSCESCMSIRFNKAGTQLL 138 (224)
Q Consensus 79 ~------~~i~~~~~~~~~~~~l~~~~~d------------g~v~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~ 138 (224)
. ..+..++|+| +++++++++.+ +.|.+||+.+++... ....+...+.+++|+|+|+ ++
T Consensus 85 ~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EE
T ss_pred cccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EE
Confidence 2 2378899999 88888888755 899999998743222 2223445688999999999 55
Q ss_pred eeecCCCcEEEECCCCCcceec
Q psy11351 139 GLRRRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 139 ~~~~d~~v~v~d~~~~~~~~~~ 160 (224)
+++ +.|++||+.+++....+
T Consensus 163 ~~~--~~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 163 VAG--PDIYKMDVKTGKYTVAL 182 (349)
T ss_dssp EES--SSEEEECTTTCCEEEEE
T ss_pred Ecc--CcEEEEeCCCCceeccc
Confidence 553 34999999988776655
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.3e-21 Score=144.24 Aligned_cols=192 Identities=11% Similarity=0.034 Sum_probs=140.0
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCC-CceeeEE-ec-cCCeeEEEEcCCCCcEEEEec--CCCEEEEE--ecCCccccee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMAS-GDPIDFY-LH-ERPVYGLSVDPSQDAIFASAC--DDGRVLLF--DTRSREEATE 74 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~-~~-~~~v~~~~~~~~~~~~l~s~~--~d~~i~iw--d~~~~~~~~~ 74 (224)
+.+++++++++++ ++.|++||+.+ ++..... .+ ...+.+++|+|++ ++|++++ .++...|| +..+++ ...
T Consensus 48 ~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~~~~-~~~ 124 (297)
T 2ojh_A 48 NWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPSTGGT-PRL 124 (297)
T ss_dssp EECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETTCCC-CEE
T ss_pred EECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCC-CEEEEEEeCCCCcceEEEEECCCCc-eEE
Confidence 4567788899887 78999999999 8777665 34 4788999999999 7888877 33445555 444444 344
Q ss_pred eccCCcCeEEEEEcCCCCCeEE-EecCCCcEEEEecCC-CceeeEeecCCCceeEEEEcCCCCeEeeee-cCCCcEEEEC
Q psy11351 75 LAVNSGPFHAVMFNPVEARLVA-TANSKDGIALYDTRK-PKEVLMQYGSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNT 151 (224)
Q Consensus 75 ~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~ 151 (224)
+..+ ..+..++|+| +++.++ +++.++.+++|++.. ......+..+...+.+++|+|++++|+.++ .++.+++|++
T Consensus 125 ~~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~ 202 (297)
T 2ojh_A 125 MTKN-LPSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRV 202 (297)
T ss_dssp CCSS-SSEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred eecC-CCccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEE
Confidence 4433 3489999999 666665 788899999998643 234455666778899999999999888766 5889999988
Q ss_pred C-CCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCC-----------CeEEEEeCCCCCeE
Q psy11351 152 R-SSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDD-----------FVLYMWRVPRDDIY 204 (224)
Q Consensus 152 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----------~~v~iw~~~~~~~~ 204 (224)
. .+.....+ .+.. ....+.|+| ++++|++++.+ +.|++||+.+++..
T Consensus 203 ~~~~~~~~~~~~~~~-----~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 262 (297)
T 2ojh_A 203 RVDGSSVERITDSAY-----GDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE 262 (297)
T ss_dssp ETTSSCEEECCCCSE-----EEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred CCCCCCcEEEecCCc-----ccCCeEECC-CCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence 6 44455555 3332 244578888 68888777665 57999999988653
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=1.6e-21 Score=161.51 Aligned_cols=195 Identities=8% Similarity=0.059 Sum_probs=146.3
Q ss_pred CCCCcceEEEEEeC-CC-----cEEEEeCCCCceeeEE-ecc------------------------CCeeEEEEcCCCCc
Q psy11351 2 ASGDPIKVLRVIGN-DD-----HVISHDMASGDPIDFY-LHE------------------------RPVYGLSVDPSQDA 50 (224)
Q Consensus 2 a~~~~~~~l~~~~~-dg-----~i~iwd~~~~~~~~~~-~~~------------------------~~v~~~~~~~~~~~ 50 (224)
+.+.+|++|++++. |+ +|++||+.+++..... .+. ..+.+++|+|+| +
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg-~ 121 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDA-Q 121 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTS-S
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCC-C
Confidence 45778999999998 88 8999999999887766 332 237899999999 7
Q ss_pred EEEEecCCCEEEEEecCCcc--cceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCc----
Q psy11351 51 IFASACDDGRVLLFDTRSRE--EATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCES---- 124 (224)
Q Consensus 51 ~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~---- 124 (224)
+|++++. +.|.+||+.+++ ....+..+...+..++|+| ++++|+.++ ++.|++||+.+++.......+...
T Consensus 122 ~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g 198 (741)
T 2ecf_A 122 RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNG 198 (741)
T ss_dssp EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEES
T ss_pred EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceecc
Confidence 8888775 899999999873 3556667778899999999 889888886 468999999987544333333222
Q ss_pred ------------eeEEEEcCCCCeEeeeecCC---------------------------------CcEEEECCC-CCcce
Q psy11351 125 ------------CMSIRFNKAGTQLLGLRRRL---------------------------------PPVLYNTRS-SSPVA 158 (224)
Q Consensus 125 ------------v~~~~~~~~~~~l~~~~~d~---------------------------------~v~v~d~~~-~~~~~ 158 (224)
+..++|+|||++|++++.|+ .|++||+.+ ++...
T Consensus 199 ~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~ 278 (741)
T 2ecf_A 199 IAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQW 278 (741)
T ss_dssp CCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEE
T ss_pred ccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEE
Confidence 47799999999999987765 688899988 76544
Q ss_pred ecccCCcccceeeeEEEEeCCCCeEEEEcC-----CCCeEEEEeCCCCCeE
Q psy11351 159 QFDHEGYYNSCTMKSCCFAGTQDEYVVSGS-----DDFVLYMWRVPRDDIY 204 (224)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-----~d~~v~iw~~~~~~~~ 204 (224)
...... ....+..++| | ++++|+.++ .+..|++||+.+++..
T Consensus 279 ~~~~~~--~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~~ 325 (741)
T 2ecf_A 279 IDLGKE--QDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLASNQQR 325 (741)
T ss_dssp ECCCSC--SSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTTCCEE
T ss_pred ecCCCC--cceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCCCceE
Confidence 331101 1122344677 6 788877544 3678999999998764
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=1e-20 Score=142.30 Aligned_cols=193 Identities=7% Similarity=0.069 Sum_probs=141.5
Q ss_pred CCCCcceEEEEEeC-CCcEEEEeCCCCce-eeEE-eccCCeeEEEEcCCCCcEEEEecCCC---EEEEEecCCcccceee
Q psy11351 2 ASGDPIKVLRVIGN-DDHVISHDMASGDP-IDFY-LHERPVYGLSVDPSQDAIFASACDDG---RVLLFDTRSREEATEL 75 (224)
Q Consensus 2 a~~~~~~~l~~~~~-dg~i~iwd~~~~~~-~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~ 75 (224)
+++++++++++++. ++.|.+||+.+++. .... .+..+..+++|+|++ ++++++..++ .|.+||+.+++.+..+
T Consensus 46 ~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~~~ 124 (331)
T 3u4y_A 46 AITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNKFISTI 124 (331)
T ss_dssp EECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTEEEEEE
T ss_pred EEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCCCeEEEE
Confidence 45677776665555 89999999999887 5555 445555559999999 6777665553 9999999998877776
Q ss_pred ccCCcCeEEEEEcCCCCC-eEEEecCCCc-EEEEecCCCcee----eEeecCCCceeEEEEcCCCCeEeeee-cCCCcEE
Q psy11351 76 AVNSGPFHAVMFNPVEAR-LVATANSKDG-IALYDTRKPKEV----LMQYGSCESCMSIRFNKAGTQLLGLR-RRLPPVL 148 (224)
Q Consensus 76 ~~~~~~i~~~~~~~~~~~-~l~~~~~dg~-v~i~d~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v 148 (224)
..+ ....+++|+| +++ ++++...++. +.+|++.....+ .........+..++|+|+|+++++++ .++.|++
T Consensus 125 ~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 202 (331)
T 3u4y_A 125 PIP-YDAVGIAISP-NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGI 202 (331)
T ss_dssp ECC-TTEEEEEECT-TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ECC-CCccceEECC-CCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEE
Confidence 553 4568999999 665 5555566688 999998864333 22223455689999999999766554 5788999
Q ss_pred EECCCCCc---ceecccCCcccceeeeEEEEeCCCCeEE-EEcCCCCeEEEEeCCCCCe
Q psy11351 149 YNTRSSSP---VAQFDHEGYYNSCTMKSCCFAGTQDEYV-VSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 149 ~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~v~iw~~~~~~~ 203 (224)
||+.+++. +..+.....+.. ++|+| +++++ ++...++.|.+||+.+++.
T Consensus 203 ~d~~~~~~~~~~~~~~~~~~~~~-----~~~sp-dg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 203 LETQNPENITLLNAVGTNNLPGT-----IVVSR-DGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EECSSTTSCEEEEEEECSSCCCC-----EEECT-TSSEEEEECSSEEEEEEEETTTTEE
T ss_pred EECCCCcccceeeeccCCCCCce-----EEECC-CCCEEEEEEcCCCEEEEEECCCCce
Confidence 99999888 666644444333 66777 67755 5555688999999999876
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=1.4e-21 Score=161.34 Aligned_cols=197 Identities=8% Similarity=0.020 Sum_probs=145.2
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEe-ccC---CeeEEEEcCCCCcEEEEecCC---------CEEEEEecCC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYL-HER---PVYGLSVDPSQDAIFASACDD---------GRVLLFDTRS 68 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~---~v~~~~~~~~~~~~l~s~~~d---------~~i~iwd~~~ 68 (224)
+.+++|+++++ +.||+|++||+.+++....+. |.. .+.+++|+|+| ++|++++.+ +.+.+||+.+
T Consensus 23 ~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 100 (723)
T 1xfd_A 23 KWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDR-EYALFSYNVEPIYQHSYTGYYVLSKIPH 100 (723)
T ss_dssp CBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTS-SEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred EEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCC-CEEEEEecCccceeecceeeEEEEECCC
Confidence 55677887766 789999999999998877774 443 49999999999 788887664 7899999998
Q ss_pred cccceee---ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCc------------------eeE
Q psy11351 69 REEATEL---AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCES------------------CMS 127 (224)
Q Consensus 69 ~~~~~~~---~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~------------------v~~ 127 (224)
++. ..+ ..|...+..++|+| +++.|+.++. +.|++||+.+++.......+... +.+
T Consensus 101 ~~~-~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 101 GDP-QSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp CCC-EECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred Cce-EeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcce
Confidence 875 333 34444588999999 8888888865 79999999987654444433332 378
Q ss_pred EEEcCCCCeEeeeecCC----------------------------------CcEEEECCCCCcceecc-cCCc-ccceee
Q psy11351 128 IRFNKAGTQLLGLRRRL----------------------------------PPVLYNTRSSSPVAQFD-HEGY-YNSCTM 171 (224)
Q Consensus 128 ~~~~~~~~~l~~~~~d~----------------------------------~v~v~d~~~~~~~~~~~-~~~~-~~~~~~ 171 (224)
++|+|||++|++++.++ .|++||+.+++....+. +... -....+
T Consensus 178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~ 257 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYI 257 (723)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEE
T ss_pred EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCcccee
Confidence 99999999999887553 68899998877545552 2110 012234
Q ss_pred eEEEEeCCCCeEEEEcC----CCCeEEEEeCCCCCeE
Q psy11351 172 KSCCFAGTQDEYVVSGS----DDFVLYMWRVPRDDIY 204 (224)
Q Consensus 172 ~~~~~~~~~~~~l~s~~----~d~~v~iw~~~~~~~~ 204 (224)
..+.|+| +++++++.+ .+..|++||+.+++..
T Consensus 258 ~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~ 293 (723)
T 1xfd_A 258 TMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCT 293 (723)
T ss_dssp EEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEE
T ss_pred EEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcce
Confidence 5688998 688886653 3468999999998764
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=5.2e-21 Score=141.06 Aligned_cols=176 Identities=10% Similarity=0.018 Sum_probs=130.2
Q ss_pred EeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCC-cccceeeccC-CcCeEEEEEcCC
Q psy11351 13 IGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRS-REEATELAVN-SGPFHAVMFNPV 90 (224)
Q Consensus 13 ~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~-~~~i~~~~~~~~ 90 (224)
++.|++|++||+.+++......|...+.+++|+|++ ++|++++ ++.|++||+.+ ++.......+ ...+.+++|+|
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp- 94 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP- 94 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT-
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC-
Confidence 457899999999999988777999999999999999 7888876 78999999998 7766665555 36788999999
Q ss_pred CCCeEEEec--CCCcEEEEec--CCCceeeEeecCCCceeEEEEcCCCCeEe-eeecCCCcEEEEC--CCCCcceecccC
Q psy11351 91 EARLVATAN--SKDGIALYDT--RKPKEVLMQYGSCESCMSIRFNKAGTQLL-GLRRRLPPVLYNT--RSSSPVAQFDHE 163 (224)
Q Consensus 91 ~~~~l~~~~--~dg~v~i~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~v~d~--~~~~~~~~~~~~ 163 (224)
+++++++++ .++...||.+ ..++ ...+. ....+..++|+|++++|+ ++..++.+++|++ .+++......+.
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCC-CEECC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCc-eEEee-cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC
Confidence 888888887 3345555554 4443 33333 334588999999999887 6778888899985 334332222444
Q ss_pred CcccceeeeEEEEeCCCCeEEEEc-CCCCeEEEEeCC
Q psy11351 164 GYYNSCTMKSCCFAGTQDEYVVSG-SDDFVLYMWRVP 199 (224)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~l~s~-~~d~~v~iw~~~ 199 (224)
..+ ..++|+| ++++|+.+ ..++.+++|++.
T Consensus 173 ~~~-----~~~~~s~-dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 173 GRN-----DGPDYSP-DGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp SCE-----EEEEECT-TSSEEEEEECTTSSCEEEEEE
T ss_pred Ccc-----ccceECC-CCCEEEEEecCCCCccEEEEC
Confidence 433 3477888 57766554 468889999876
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=8.3e-20 Score=137.62 Aligned_cols=194 Identities=10% Similarity=0.047 Sum_probs=133.6
Q ss_pred CCCCcceEEEEEeCC-CcEEEEeCC--CCcee--eEEeccCCeeEEEEcCCCCcEE-EEecCCCEEEEEecC---Ccccc
Q psy11351 2 ASGDPIKVLRVIGND-DHVISHDMA--SGDPI--DFYLHERPVYGLSVDPSQDAIF-ASACDDGRVLLFDTR---SREEA 72 (224)
Q Consensus 2 a~~~~~~~l~~~~~d-g~i~iwd~~--~~~~~--~~~~~~~~v~~~~~~~~~~~~l-~s~~~d~~i~iwd~~---~~~~~ 72 (224)
+.+.+++++++++.+ +.|++|++. +++.. ..+.....+..++|+|++ +++ +++..++.|.+||+. ..+..
T Consensus 44 ~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~~~~~ 122 (343)
T 1ri6_A 44 VVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPVGVV 122 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEEEEE
T ss_pred EECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCcccccc
Confidence 456778888888876 999999998 55543 333444588999999999 555 555568999999994 44444
Q ss_pred eeeccCCcCeEEEEEcCCCCCeEEEec-CCCcEEEEecCC-Cceee----Eee-cCCCceeEEEEcCCCCeEeeee-cCC
Q psy11351 73 TELAVNSGPFHAVMFNPVEARLVATAN-SKDGIALYDTRK-PKEVL----MQY-GSCESCMSIRFNKAGTQLLGLR-RRL 144 (224)
Q Consensus 73 ~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~v~i~d~~~-~~~~~----~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~ 144 (224)
..+..+ ..+.+++|+| +++++++++ .++.|.+||+.+ ++... ... .....+..++|+|+++++++++ .++
T Consensus 123 ~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 123 DVVEGL-DGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp EEECCC-TTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ccccCC-CCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 444443 4588999999 777666665 889999999987 43321 222 2445788999999999776655 788
Q ss_pred CcEEEECCC--CCcc--eecc-cCCc-ccceeeeEEEEeCCCCeEE-EEcCCCCeEEEEeCC
Q psy11351 145 PPVLYNTRS--SSPV--AQFD-HEGY-YNSCTMKSCCFAGTQDEYV-VSGSDDFVLYMWRVP 199 (224)
Q Consensus 145 ~v~v~d~~~--~~~~--~~~~-~~~~-~~~~~~~~~~~~~~~~~~l-~s~~~d~~v~iw~~~ 199 (224)
.+.+|++.. ++.. ..+. .... ........++|+| ++++| +++..++.|.+||+.
T Consensus 201 ~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~-dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 201 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP-DGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT-TSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC-CCCEEEEEecCCCEEEEEEEc
Confidence 999999954 3321 1111 1111 0111233578888 56555 466789999999998
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=2.1e-20 Score=140.94 Aligned_cols=194 Identities=10% Similarity=0.137 Sum_probs=129.9
Q ss_pred CCCCcceEEEEEe-CCCcEEEEeCC---CCceeeEEeccCCeeEEEEcCCCCcEEEEec-CCCEEEEEecCC-cccce--
Q psy11351 2 ASGDPIKVLRVIG-NDDHVISHDMA---SGDPIDFYLHERPVYGLSVDPSQDAIFASAC-DDGRVLLFDTRS-REEAT-- 73 (224)
Q Consensus 2 a~~~~~~~l~~~~-~dg~i~iwd~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~-~~~~~-- 73 (224)
+.+++++++++++ .++.|.+||+. ..+..........+.+++|+|++ +.+++++ .++.|.+||+.+ ++...
T Consensus 90 ~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 168 (343)
T 1ri6_A 90 STDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLVAQD 168 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred EEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCC-CEEEEecCCCCEEEEEEecCCCceeeec
Confidence 4566777776665 48899999994 33444445555679999999998 5555555 899999999987 54321
Q ss_pred --eecc-CCcCeEEEEEcCCCCCeE-EEecCCCcEEEEecCC--Cce--eeEeec------CCCceeEEEEcCCCCeEee
Q psy11351 74 --ELAV-NSGPFHAVMFNPVEARLV-ATANSKDGIALYDTRK--PKE--VLMQYG------SCESCMSIRFNKAGTQLLG 139 (224)
Q Consensus 74 --~~~~-~~~~i~~~~~~~~~~~~l-~~~~~dg~v~i~d~~~--~~~--~~~~~~------~~~~v~~~~~~~~~~~l~~ 139 (224)
.+.. ....+..++|+| +++++ +++..++.+.+||+.. ++. ...... ....+..++|+|++++|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v 247 (343)
T 1ri6_A 169 PAEVTTVEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYA 247 (343)
T ss_dssp EEEEECSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEE
T ss_pred ccccccCCCCCcceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEE
Confidence 2222 234788999999 67655 5555889999999964 321 112211 1235668999999998875
Q ss_pred ee-cCCCcEEEECCC--C--CcceecccCCcccceeeeEEEEeCCCCeEEEEcC-CCCeEEEEeC--CCCCe
Q psy11351 140 LR-RRLPPVLYNTRS--S--SPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS-DDFVLYMWRV--PRDDI 203 (224)
Q Consensus 140 ~~-~d~~v~v~d~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~v~iw~~--~~~~~ 203 (224)
+. .++.|.+||+.. + +.+..+.....+.. ++|+| ++++|++++ .++.+.+|++ .+++.
T Consensus 248 ~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~-----~~~s~-dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 248 CDRTASLITVFSVSEDGSVLSKEGFQPTETQPRG-----FNVDH-SGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp EETTTTEEEEEEECTTSCCEEEEEEEECSSSCCC-----EEECT-TSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred EecCCCEEEEEEEcCCCCceEEeeeecCCCccce-----EEECC-CCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 54 788999999983 2 23333322222333 67777 677666665 6899999954 45544
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=4.2e-20 Score=139.65 Aligned_cols=189 Identities=11% Similarity=0.072 Sum_probs=137.5
Q ss_pred CCCCcceE-EEEEeCCCcEEEEeCCCCceeeEEec-------cCCeeEEEEcCCCCcEEEEecCC------------CEE
Q psy11351 2 ASGDPIKV-LRVIGNDDHVISHDMASGDPIDFYLH-------ERPVYGLSVDPSQDAIFASACDD------------GRV 61 (224)
Q Consensus 2 a~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~~d------------~~i 61 (224)
++++++++ ++++..++.|.+||+.+++.+..+.. ...+.+++|+|++ +++++++.+ +.|
T Consensus 49 ~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i 127 (349)
T 1jmx_B 49 MMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRL 127 (349)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEE
T ss_pred EECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCC-CEEEEEcccccccccccccCCCeE
Confidence 34566664 45666789999999999988766632 2347899999999 788777755 899
Q ss_pred EEEecCCcccce---eeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCC----------------
Q psy11351 62 LLFDTRSREEAT---ELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSC---------------- 122 (224)
Q Consensus 62 ~iwd~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~---------------- 122 (224)
.+||+.+++... .+. +...+.+++|+| +++ +++++. .|.+||+.+++....+....
T Consensus 128 ~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~-dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (349)
T 1jmx_B 128 EVFSTADGLEAKPVRTFP-MPRQVYLMRAAD-DGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWP 202 (349)
T ss_dssp EEEEGGGGGGBCCSEEEE-CCSSCCCEEECT-TSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCC
T ss_pred EEEECCCccccceeeecc-CCCcccceeECC-CCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeec
Confidence 999998865432 332 334688999999 777 444433 49999998876554433211
Q ss_pred ----------------------------------------------------CceeEEEEcC-CCCeEeeeecCCCcEEE
Q psy11351 123 ----------------------------------------------------ESCMSIRFNK-AGTQLLGLRRRLPPVLY 149 (224)
Q Consensus 123 ----------------------------------------------------~~v~~~~~~~-~~~~l~~~~~d~~v~v~ 149 (224)
..+..++|+| ++++++++ ++.|++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~ 280 (349)
T 1jmx_B 203 HQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKY 280 (349)
T ss_dssp CCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEE
T ss_pred CCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEE
Confidence 1345677889 99999888 7889999
Q ss_pred ECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 150 NTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
|+.+++.+..+.....+. .++|+| ++++|++++.++.|++||+.+++..
T Consensus 281 d~~~~~~~~~~~~~~~~~-----~~~~s~-dg~~l~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 281 DLKQRKLIKAANLDHTYY-----CVAFDK-KGDKLYLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp ETTTTEEEEEEECSSCCC-----EEEECS-SSSCEEEESBSSEEEEEETTTTEEE
T ss_pred ECccCeEEEEEcCCCCcc-----ceEECC-CCCEEEEecCCCeEEEEecccccee
Confidence 999988877764333333 367777 6777777788899999999998764
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=9.7e-20 Score=150.14 Aligned_cols=193 Identities=9% Similarity=0.112 Sum_probs=141.3
Q ss_pred CCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCC-----cccceeecc
Q psy11351 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRS-----REEATELAV 77 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~~ 77 (224)
.+++ +.++.+ .+++|++||+.+++......+...+.+++|+|+| +.|+++ .|+.|++||+.+ ++.......
T Consensus 89 ~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~ 164 (706)
T 2z3z_A 89 DAGR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLGEGMSRAIAVTID 164 (706)
T ss_dssp ETTT-TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTTSCCCCCEESCSC
T ss_pred ECCC-CeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecCcccccCCCcEEeccC
Confidence 3444 444444 3699999999998887777788889999999999 788775 579999999998 765544433
Q ss_pred CCcC--------------eEEEEEcCCCCCeEEEec---------------------------------CCCcEEEEecC
Q psy11351 78 NSGP--------------FHAVMFNPVEARLVATAN---------------------------------SKDGIALYDTR 110 (224)
Q Consensus 78 ~~~~--------------i~~~~~~~~~~~~l~~~~---------------------------------~dg~v~i~d~~ 110 (224)
+... +.++.|+| ++++|++++ .+..|.+||+.
T Consensus 165 ~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~ 243 (706)
T 2z3z_A 165 GTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA 243 (706)
T ss_dssp CBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT
T ss_pred CCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC
Confidence 3332 48899999 888888886 44679999999
Q ss_pred CCceeeEee--cCCCceeEEEEcCCCCeEeeeecCC-----CcEEEECCCCCcceec-c--cCCcccceeeeEEEEeC-C
Q psy11351 111 KPKEVLMQY--GSCESCMSIRFNKAGTQLLGLRRRL-----PPVLYNTRSSSPVAQF-D--HEGYYNSCTMKSCCFAG-T 179 (224)
Q Consensus 111 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~v~d~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~-~ 179 (224)
+++...... .+...+..++|+|||++|++++.++ .|++||+.+++....+ . ....+. ....+.|+| .
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~--~~~~~~~sp~~ 321 (706)
T 2z3z_A 244 TGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE--PLHPLTFLPGS 321 (706)
T ss_dssp TTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC--CCSCCEECTTC
T ss_pred CCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC--ccCCceeecCC
Confidence 876433332 3667899999999999999887665 7999999988443333 2 111111 113467888 2
Q ss_pred CCeEEEEcCCCCeEEEEeCC-CCC
Q psy11351 180 QDEYVVSGSDDFVLYMWRVP-RDD 202 (224)
Q Consensus 180 ~~~~l~s~~~d~~v~iw~~~-~~~ 202 (224)
+++++++++.|+.+++|++. +++
T Consensus 322 dg~~l~~~~~~g~~~l~~~~~~~~ 345 (706)
T 2z3z_A 322 NNQFIWQSRRDGWNHLYLYDTTGR 345 (706)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSC
T ss_pred CCEEEEEEccCCccEEEEEECCCC
Confidence 47899999999989999876 443
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.84 E-value=4.2e-20 Score=153.01 Aligned_cols=190 Identities=11% Similarity=0.053 Sum_probs=142.9
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCC---ceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASG---DPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVN 78 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 78 (224)
+.+.+|++|++++. ++|++||+.++ +......|...+.+++|+|+| ++|+.++ ++.|++||+.+++.......+
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETTTTEEEECCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecCCCCEEEeccCC
Confidence 45778899999886 99999999988 665555788899999999999 7888877 469999999987755444333
Q ss_pred CcC----------------eEEEEEcCCCCCeEEEecCCC---------------------------------cEEEEec
Q psy11351 79 SGP----------------FHAVMFNPVEARLVATANSKD---------------------------------GIALYDT 109 (224)
Q Consensus 79 ~~~----------------i~~~~~~~~~~~~l~~~~~dg---------------------------------~v~i~d~ 109 (224)
... +..++|+| +++.|++++.|+ .|.+||+
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred ccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 332 47899999 888888887655 7889999
Q ss_pred CC-CceeeEee--cCCCceeEEEEcCCCCeEeeeec-----CCCcEEEECCCCCcceecc-cC-CcccceeeeEEEEeCC
Q psy11351 110 RK-PKEVLMQY--GSCESCMSIRFNKAGTQLLGLRR-----RLPPVLYNTRSSSPVAQFD-HE-GYYNSCTMKSCCFAGT 179 (224)
Q Consensus 110 ~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~v~d~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 179 (224)
.+ ++...... .+...+..++| |||++|++++. +..|++||+.+++....+. +. ..+. ....+.|+|
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~--~~~~~~~sp- 346 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVP--LHNSLRFLD- 346 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCC--CCSCCEECT-
T ss_pred CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCC--cCCceEECC-
Confidence 87 65433322 36678999999 99999987654 4569999999988766653 22 1111 112367788
Q ss_pred CCeEEEEcCCCCeEEEEeCC
Q psy11351 180 QDEYVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 180 ~~~~l~s~~~d~~v~iw~~~ 199 (224)
+++++++++.|+.+++|.+.
T Consensus 347 dg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp TSCEEEEECTTSSCEEEEEC
T ss_pred CCeEEEEecCCCccEEEEEc
Confidence 68899999999977777665
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=1.5e-18 Score=131.49 Aligned_cols=195 Identities=10% Similarity=0.070 Sum_probs=130.4
Q ss_pred CCCCcceEEEEEeC---CCcEEEEeCCCCcee--eE-EeccCCeeEEEEcCCCCcEEEEec-CCCEEEEEecCCc-c--c
Q psy11351 2 ASGDPIKVLRVIGN---DDHVISHDMASGDPI--DF-YLHERPVYGLSVDPSQDAIFASAC-DDGRVLLFDTRSR-E--E 71 (224)
Q Consensus 2 a~~~~~~~l~~~~~---dg~i~iwd~~~~~~~--~~-~~~~~~v~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~-~--~ 71 (224)
+++++++ +++++. ++.|++|++.+++.. .. ..+...+..++|+|++ ++|++++ .++.+.+|++... . .
T Consensus 46 a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg-~~l~~~~~~~~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 46 ALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEAR-QLVYSANYHKGTAEVMKIAADGALTL 123 (347)
T ss_dssp EECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTT-TEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred EEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCC-CEEEEEeCCCCEEEEEEeCCCCCeee
Confidence 4566777 554444 689999999877643 33 2577889999999999 6666665 7899999999632 2 2
Q ss_pred ceeecc---------CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecC-CCceee--Eee-cCCCceeEEEEcCCCCeEe
Q psy11351 72 ATELAV---------NSGPFHAVMFNPVEARLVATANSKDGIALYDTR-KPKEVL--MQY-GSCESCMSIRFNKAGTQLL 138 (224)
Q Consensus 72 ~~~~~~---------~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~-~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~ 138 (224)
+..+.. +...+.+++|+| +++++++...++.|.+||+. +++... .+. .....+..++|+|+|++++
T Consensus 124 ~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 124 TDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp EEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred cceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEE
Confidence 222221 122488999999 66777777788999999998 343221 112 2334678899999999776
Q ss_pred ee-ecCCCcEEEECCC--CCcc--eec-ccCCc-ccceeeeEEEEeCCCCeEE-EEcCCCCeEEEEeCCC
Q psy11351 139 GL-RRRLPPVLYNTRS--SSPV--AQF-DHEGY-YNSCTMKSCCFAGTQDEYV-VSGSDDFVLYMWRVPR 200 (224)
Q Consensus 139 ~~-~~d~~v~v~d~~~--~~~~--~~~-~~~~~-~~~~~~~~~~~~~~~~~~l-~s~~~d~~v~iw~~~~ 200 (224)
++ ..++.+.+|++.. ++.. ..+ ..... ........++|+| ++++| ++...++.|.+|++..
T Consensus 203 v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 203 LAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT-TSCEEEEEEETTTEEEEEEECG
T ss_pred EEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC-CCCEEEEEeCCCCEEEEEEECC
Confidence 64 5678899999874 4321 122 11111 0112244578888 67765 6666789999999973
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=3.5e-18 Score=129.39 Aligned_cols=195 Identities=10% Similarity=0.132 Sum_probs=129.8
Q ss_pred CCCCcceEEEEEe-CCCcEEEEeCC-CCcee--eEEecc----------CCeeEEEEcCCCCcEEEEecCCCEEEEEecC
Q psy11351 2 ASGDPIKVLRVIG-NDDHVISHDMA-SGDPI--DFYLHE----------RPVYGLSVDPSQDAIFASACDDGRVLLFDTR 67 (224)
Q Consensus 2 a~~~~~~~l~~~~-~dg~i~iwd~~-~~~~~--~~~~~~----------~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 67 (224)
++++++++|++++ .+++|++|++. +++.. ....+. ..+.+++|+|++ +++++...++.|.+||+.
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg-~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDN-RLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTS-CEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCC-cEEEEeCCCCEEEEEEEC
Confidence 4567788888777 78999999996 33322 222221 248899999999 588888889999999998
Q ss_pred -Ccccc--eeeccC-CcCeEEEEEcCCCCC-eEEEecCCCcEEEEecCC--Cce--eeEeecCC------CceeEEEEcC
Q psy11351 68 -SREEA--TELAVN-SGPFHAVMFNPVEAR-LVATANSKDGIALYDTRK--PKE--VLMQYGSC------ESCMSIRFNK 132 (224)
Q Consensus 68 -~~~~~--~~~~~~-~~~i~~~~~~~~~~~-~l~~~~~dg~v~i~d~~~--~~~--~~~~~~~~------~~v~~~~~~~ 132 (224)
+++.. ..+..+ ......++|+| +++ +++++..++.+.+|++.. ++. ........ ..+..++|+|
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRHLVFSP-DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred CCCcEEEeeeEEcCCCCCCceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 44322 122222 23678899999 777 455567788999999874 322 11222211 4588899999
Q ss_pred CCCeEee-eecCCCcEEEECCCC---Ccceecc-cCCcccceeeeEEEEeCCCCeEEEEcC-CCCeEEEE--eCCCCCeE
Q psy11351 133 AGTQLLG-LRRRLPPVLYNTRSS---SPVAQFD-HEGYYNSCTMKSCCFAGTQDEYVVSGS-DDFVLYMW--RVPRDDIY 204 (224)
Q Consensus 133 ~~~~l~~-~~~d~~v~v~d~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~v~iw--~~~~~~~~ 204 (224)
+|++|++ ...++.|.+|++... +.+..+. +...+. .++|+| ++++|++++ .++.+.+| |..+++..
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~-----~~~~sp-dg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPR-----DFDLDP-TEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCC-----EEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcC-----eEEECC-CCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 9998855 455788999999732 2222332 222233 367777 687766665 45899999 55566654
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=2.1e-19 Score=154.00 Aligned_cols=188 Identities=10% Similarity=0.042 Sum_probs=151.6
Q ss_pred CC-CcceEEEEEeCCCcEEEEeCCCCceeeEEeccC-CeeEEEEcCCCCcEEEEecCCCEEE-EEecCCcccceeeccCC
Q psy11351 3 SG-DPIKVLRVIGNDDHVISHDMASGDPIDFYLHER-PVYGLSVDPSQDAIFASACDDGRVL-LFDTRSREEATELAVNS 79 (224)
Q Consensus 3 ~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~~d~~i~-iwd~~~~~~~~~~~~~~ 79 (224)
.+ ++|+++++++ ++.|.+|+..+++......|.. .+..++|+ ++ +.++.++.+..+. +||+..++.. .+..|.
T Consensus 303 ~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~ 378 (1045)
T 1k32_A 303 FSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRTGKAE-KFEENL 378 (1045)
T ss_dssp EEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTTCCEE-ECCCCC
T ss_pred ecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCCCCce-EecCCc
Confidence 45 6788888887 8899999999887666557777 89999999 88 7888888888898 9999877643 344777
Q ss_pred cCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCC----------CcEEE
Q psy11351 80 GPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRL----------PPVLY 149 (224)
Q Consensus 80 ~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----------~v~v~ 149 (224)
..+..++|+| ++++|++++.++.|++||+.+++.......|...+..++|+|||++|++++.++ .|++|
T Consensus 379 ~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~ 457 (1045)
T 1k32_A 379 GNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY 457 (1045)
T ss_dssp CSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEE
T ss_pred cceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEE
Confidence 8899999999 899999999999999999998876666657888999999999999998887654 79999
Q ss_pred ECCCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 150 NTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 150 d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
|+.+++ ...+ .+...+. .+.|+| ++++|+.++.++...+|+.....
T Consensus 458 d~~~g~-~~~l~~~~~~~~-----~~~~sp-dG~~l~~~s~~~~~~~~~~~~~~ 504 (1045)
T 1k32_A 458 DMEGRK-IFAATTENSHDY-----APAFDA-DSKNLYYLSYRSLDPSPDRVVLN 504 (1045)
T ss_dssp ETTTTE-EEECSCSSSBEE-----EEEECT-TSCEEEEEESCCCCCEECSSSSC
T ss_pred ECCCCc-EEEeeCCCcccC-----CceEcC-CCCEEEEEecccCCcCcchhccc
Confidence 999877 3333 4433332 367888 78999888888888888766443
No 152
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=2.1e-19 Score=148.43 Aligned_cols=196 Identities=9% Similarity=0.060 Sum_probs=139.2
Q ss_pred CCCCcceEEEEEeCC---------CcEEEEeCCCCceeeEE---eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc
Q psy11351 2 ASGDPIKVLRVIGND---------DHVISHDMASGDPIDFY---LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR 69 (224)
Q Consensus 2 a~~~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 69 (224)
+++++|++|++++.+ +.+++||+.+++..... +|...+..++|+|+| +.|+.++. +.|++||+.++
T Consensus 67 ~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g 144 (723)
T 1xfd_A 67 EISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGK 144 (723)
T ss_dssp EECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSS
T ss_pred EECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCCC
Confidence 456789999999875 78889999998863333 345568999999999 78888775 79999999988
Q ss_pred ccceeeccCCcCe------------------EEEEEcCCCCCeEEEecCCC-----------------------------
Q psy11351 70 EEATELAVNSGPF------------------HAVMFNPVEARLVATANSKD----------------------------- 102 (224)
Q Consensus 70 ~~~~~~~~~~~~i------------------~~~~~~~~~~~~l~~~~~dg----------------------------- 102 (224)
+.......+...+ .+++|+| +++.|++++.++
T Consensus 145 ~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 223 (723)
T 1xfd_A 145 QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGS 223 (723)
T ss_dssp CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTS
T ss_pred ceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCC
Confidence 7665554433333 7899999 888888876543
Q ss_pred -----cEEEEecCCCceeeEeecC------CCceeEEEEcCCCCeEeeeecC----CCcEEEECCCCCcceecc--cCCc
Q psy11351 103 -----GIALYDTRKPKEVLMQYGS------CESCMSIRFNKAGTQLLGLRRR----LPPVLYNTRSSSPVAQFD--HEGY 165 (224)
Q Consensus 103 -----~v~i~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d----~~v~v~d~~~~~~~~~~~--~~~~ 165 (224)
.|++||+.+++....+..+ ...+..++|+|||+++++...+ ..|++||+.+++....+. +.+.
T Consensus 224 ~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 303 (723)
T 1xfd_A 224 ENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAW 303 (723)
T ss_dssp CCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred CCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCE
Confidence 7999999887654454433 5678999999999988776433 569999999887665542 2333
Q ss_pred ccceeeeEEEEeCCCCeEEEE--cCCCC------eEEEEe-CCCCC
Q psy11351 166 YNSCTMKSCCFAGTQDEYVVS--GSDDF------VLYMWR-VPRDD 202 (224)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~l~s--~~~d~------~v~iw~-~~~~~ 202 (224)
+... .....|+| +++.|+. +..++ .|++|| ..+++
T Consensus 304 ~~~~-~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 304 LHRQ-NEEPVFSK-DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp CCCC-CCCCEECT-TSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred Eecc-CCCceEcC-CCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence 3210 01367888 5775553 45666 677788 44444
No 153
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=3e-18 Score=130.88 Aligned_cols=198 Identities=11% Similarity=0.059 Sum_probs=134.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCC-CCceeeEEecc--CCeeEEEEcCCCCc--EEEEec-------------CCCEEEE
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMA-SGDPIDFYLHE--RPVYGLSVDPSQDA--IFASAC-------------DDGRVLL 63 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~--~~v~~~~~~~~~~~--~l~s~~-------------~d~~i~i 63 (224)
+.++++++|++++.+ .|.+|++. +++......+. +.+.+++|+|++ + +++++. .++++.+
T Consensus 46 a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 46 TFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNT-RAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCC-EEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCC-CEEEEEEecCCcceeccceeecCCceEEE
Confidence 557788889998888 99999997 77765544332 346679999999 6 355654 6899999
Q ss_pred EecC-Ccccceeec----cCCcCeEEEEEcCCCCCeEEEec-CCCcEEEEecC-CCcee--eEee--cCCCceeEEEEcC
Q psy11351 64 FDTR-SREEATELA----VNSGPFHAVMFNPVEARLVATAN-SKDGIALYDTR-KPKEV--LMQY--GSCESCMSIRFNK 132 (224)
Q Consensus 64 wd~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~~l~~~~-~dg~v~i~d~~-~~~~~--~~~~--~~~~~v~~~~~~~ 132 (224)
|++. +++....+. .+...+.+++|+| ++++++++. .++.|.+||+. +++.. ..+. .+...+..++|+|
T Consensus 124 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp 202 (365)
T 1jof_A 124 FSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP 202 (365)
T ss_dssp EEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT
T ss_pred EccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC
Confidence 9997 455433333 2456789999999 777777654 46789999998 56432 1222 2356789999999
Q ss_pred CCCeEeeeec-CCCcEEEECC--CCCcce---ec-ccCCcccc-e-------eeeEEE-EeCCCCeEEEEcCCC-C----
Q psy11351 133 AGTQLLGLRR-RLPPVLYNTR--SSSPVA---QF-DHEGYYNS-C-------TMKSCC-FAGTQDEYVVSGSDD-F---- 191 (224)
Q Consensus 133 ~~~~l~~~~~-d~~v~v~d~~--~~~~~~---~~-~~~~~~~~-~-------~~~~~~-~~~~~~~~l~s~~~d-~---- 191 (224)
+|+++++++. ++.+.+|++. +++... .+ ........ . ....++ |+| ++++|+++..+ .
T Consensus 203 dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~ 281 (365)
T 1jof_A 203 TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQ 281 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSC
T ss_pred CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECC-CCCEEEEECCCCCCCCC
Confidence 9999988775 6789999865 454321 12 11111000 0 234577 888 68877665432 2
Q ss_pred -eEEEEeCC-CCCe
Q psy11351 192 -VLYMWRVP-RDDI 203 (224)
Q Consensus 192 -~v~iw~~~-~~~~ 203 (224)
.|.+|++. +++.
T Consensus 282 ~~i~v~~~~~~g~~ 295 (365)
T 1jof_A 282 GYIAGFKLRDCGSI 295 (365)
T ss_dssp CEEEEEEECTTSCE
T ss_pred CeEEEEEECCCCCE
Confidence 89999996 5554
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.82 E-value=3.1e-19 Score=144.14 Aligned_cols=190 Identities=14% Similarity=0.040 Sum_probs=133.5
Q ss_pred CCCcceEEEEEeC-CCcEEEEeCCCCceeeEEecc-CCeeEEEEcCCCCcEEEEecC---CCEEEEEecCC--cccceee
Q psy11351 3 SGDPIKVLRVIGN-DDHVISHDMASGDPIDFYLHE-RPVYGLSVDPSQDAIFASACD---DGRVLLFDTRS--REEATEL 75 (224)
Q Consensus 3 ~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~--~~~~~~~ 75 (224)
.+.+|++||.++. ||+++||++.+++......|. ..+..++|+|+ +++++++. +....+|.+.. ......+
T Consensus 29 ~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l 106 (582)
T 3o4h_A 29 GVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQRL 106 (582)
T ss_dssp EEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCEEC
T ss_pred cCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccccc
Confidence 4567889998887 999999999877776666555 68999999998 57776664 55566665543 2222233
Q ss_pred ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecC----CCcEEEEC
Q psy11351 76 AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRR----LPPVLYNT 151 (224)
Q Consensus 76 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~v~d~ 151 (224)
.... .....+|+|++..++++...++.+.+||+.+++... +..+.. .+++|+|||++|++++.+ ..|++||+
T Consensus 107 ~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~-l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~ 182 (582)
T 3o4h_A 107 EAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE-LARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNL 182 (582)
T ss_dssp TTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE-EEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEET
T ss_pred cCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE-eecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcC
Confidence 3222 344667888333444444455566699998875433 333323 789999999999988766 67999999
Q ss_pred CCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCC--eEEEEeCCCCCeE
Q psy11351 152 RSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDF--VLYMWRVPRDDIY 204 (224)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~--~v~iw~~~~~~~~ 204 (224)
.+++......+.+.+ ...+|+| |++.|+++..++ .|++||+.+++..
T Consensus 183 ~~g~~~~l~~~~~~~-----~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 183 SSGGLRVFDSGEGSF-----SSASISP-GMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp TTCCCEEECCSSCEE-----EEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCCCceEeecCCCcc-----ccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 988765443454443 4478888 799999888888 9999999988764
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=1.3e-18 Score=143.38 Aligned_cols=194 Identities=10% Similarity=0.051 Sum_probs=138.7
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCC-----CceeeEE-eccCC--------------eeEEEEcCCCCcEEEEec-----
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMAS-----GDPIDFY-LHERP--------------VYGLSVDPSQDAIFASAC----- 56 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~-~~~~~--------------v~~~~~~~~~~~~l~s~~----- 56 (224)
+.+++|++|+.+ .|+.|++||+.+ ++..... .+... +.++.|+|+| ++|++++
T Consensus 127 ~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~ 204 (706)
T 2z3z_A 127 DFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSM 204 (706)
T ss_dssp EECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTT
T ss_pred cCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCC
Confidence 456788888885 689999999998 7766544 23232 5899999999 7888776
Q ss_pred ----------------------------CCCEEEEEecCCcccceee--ccCCcCeEEEEEcCCCCCeEEEecCCC----
Q psy11351 57 ----------------------------DDGRVLLFDTRSREEATEL--AVNSGPFHAVMFNPVEARLVATANSKD---- 102 (224)
Q Consensus 57 ----------------------------~d~~i~iwd~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~dg---- 102 (224)
.+..|++||+.+++..... ..|...+.+++|+| +++.+++++.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~ 283 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNE 283 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCE
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCe
Confidence 4578999999988754433 24567799999999 888888876665
Q ss_pred -cEEEEecCCCceeeEee--cCCC---ceeEEEEcC--CCCeEeeeecCCCcEEEECC-CCCcceec-ccCCcccceeee
Q psy11351 103 -GIALYDTRKPKEVLMQY--GSCE---SCMSIRFNK--AGTQLLGLRRRLPPVLYNTR-SSSPVAQF-DHEGYYNSCTMK 172 (224)
Q Consensus 103 -~v~i~d~~~~~~~~~~~--~~~~---~v~~~~~~~--~~~~l~~~~~d~~v~v~d~~-~~~~~~~~-~~~~~~~~~~~~ 172 (224)
.|.+||+.+++....+. .+.. .+..++|+| +|+++++++.++.+++|+++ +++.+..+ .+...+. .
T Consensus 284 ~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~----~ 359 (706)
T 2z3z_A 284 CKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVT----N 359 (706)
T ss_dssp EEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEE----E
T ss_pred eEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEE----e
Confidence 89999999884333332 2222 346789999 99999999999999999876 55555555 2322221 1
Q ss_pred EEEEeCCCCeE-EEEcCCCC----eEEEEeCCCCCe
Q psy11351 173 SCCFAGTQDEY-VVSGSDDF----VLYMWRVPRDDI 203 (224)
Q Consensus 173 ~~~~~~~~~~~-l~s~~~d~----~v~iw~~~~~~~ 203 (224)
.+.|+| +++. +++++.++ .|+.||+.+++.
T Consensus 360 ~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 394 (706)
T 2z3z_A 360 FAGFDP-KGTRLYFESTEASPLERHFYCIDIKGGKT 394 (706)
T ss_dssp EEEECT-TSSEEEEEESSSCTTCBEEEEEETTCCCC
T ss_pred eeEEcC-CCCEEEEEecCCCCceEEEEEEEcCCCCc
Confidence 257888 5655 45555555 788888877653
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=5.1e-17 Score=123.71 Aligned_cols=196 Identities=9% Similarity=0.076 Sum_probs=129.1
Q ss_pred CCCCcceEEEEEeCC----CcEEEEeCCC--CceeeE--E-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccc
Q psy11351 2 ASGDPIKVLRVIGND----DHVISHDMAS--GDPIDF--Y-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEA 72 (224)
Q Consensus 2 a~~~~~~~l~~~~~d----g~i~iwd~~~--~~~~~~--~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 72 (224)
++++++++|++++.+ +.|.+|++.. ++.... . .+......+++ ++..++++...++.|.+|++.....+
T Consensus 56 ~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~ 133 (361)
T 3scy_A 56 IPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGAL 133 (361)
T ss_dssp EECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCB
T ss_pred EECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcC
Confidence 567788989988876 7999998865 443322 2 24566778888 66334445557899999999754433
Q ss_pred eeec--------------cCCcCeEEEEEcCCCCCeE-EEecCCCcEEEEecCCCce------e-------eEeecCCCc
Q psy11351 73 TELA--------------VNSGPFHAVMFNPVEARLV-ATANSKDGIALYDTRKPKE------V-------LMQYGSCES 124 (224)
Q Consensus 73 ~~~~--------------~~~~~i~~~~~~~~~~~~l-~~~~~dg~v~i~d~~~~~~------~-------~~~~~~~~~ 124 (224)
..+. .+...+.+++|+| +++++ ++...++.+.+|++..... + .........
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 212 (361)
T 3scy_A 134 LPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSG 212 (361)
T ss_dssp CSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCC
T ss_pred cccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCC
Confidence 2211 1122458899999 77754 5555688999999875432 1 122234566
Q ss_pred eeEEEEcCCCCeEeeee-cCCCcEEEECCCCCcc--eec-ccCCcccceeeeEEEEeCCCCeEEEEcC-C-CCeEEEEeC
Q psy11351 125 CMSIRFNKAGTQLLGLR-RRLPPVLYNTRSSSPV--AQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGS-D-DFVLYMWRV 198 (224)
Q Consensus 125 v~~~~~~~~~~~l~~~~-~d~~v~v~d~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~-d~~v~iw~~ 198 (224)
+..++|+|+|+++++++ .++.|.+|++.+++.. ..+ ....... ....++|+| ++++|+++. . ++.|.+|++
T Consensus 213 ~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~--~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 213 PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQ--GSGDIHLSP-DGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCC--CEEEEEECT-TSSEEEEEECSSSCEEEEEEE
T ss_pred CeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCC--CcccEEECC-CCCEEEEECCCCCCEEEEEEE
Confidence 78999999999888777 5889999999876432 222 1111111 123578888 688775544 4 589999999
Q ss_pred C--CCCe
Q psy11351 199 P--RDDI 203 (224)
Q Consensus 199 ~--~~~~ 203 (224)
. +++.
T Consensus 290 ~~~~g~~ 296 (361)
T 3scy_A 290 DETNGTL 296 (361)
T ss_dssp CTTTCCE
T ss_pred cCCCCcE
Confidence 6 4443
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=1.2e-19 Score=149.94 Aligned_cols=192 Identities=11% Similarity=0.133 Sum_probs=133.0
Q ss_pred CCcceEEEEEeCCCcEEEEeCCCCceeeEEecc-C---CeeEEEEcCCCCcEEEEecC---------CCEEEEEecCCcc
Q psy11351 4 GDPIKVLRVIGNDDHVISHDMASGDPIDFYLHE-R---PVYGLSVDPSQDAIFASACD---------DGRVLLFDTRSRE 70 (224)
Q Consensus 4 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~---~v~~~~~~~~~~~~l~s~~~---------d~~i~iwd~~~~~ 70 (224)
...++++++ +.|++|++||+.+++......+. . .+.+++|+|+| ++|++++. ++.|++||+.+++
T Consensus 24 s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~g~ 101 (719)
T 1z68_A 24 ISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSNGE 101 (719)
T ss_dssp SSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred CCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCCCc
Confidence 455665554 46999999999999988777433 2 48999999999 78887765 7899999999887
Q ss_pred cc--eeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee-cCCCce-----------------eEEEE
Q psy11351 71 EA--TELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY-GSCESC-----------------MSIRF 130 (224)
Q Consensus 71 ~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~-~~~~~v-----------------~~~~~ 130 (224)
.+ ..+ ...+..++|+| +++.|+.+. ++.|++||+.+++...... ++...+ .+++|
T Consensus 102 ~~~~~~l---~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 102 FVRGNEL---PRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp ECCSSCC---CSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred cccceec---CcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE
Confidence 63 222 24688999999 888888874 7899999998775433221 222212 48999
Q ss_pred cCCCCeEeeeecCC----------------------------------CcEEEECCCCCcc--eecccCC--cccceeee
Q psy11351 131 NKAGTQLLGLRRRL----------------------------------PPVLYNTRSSSPV--AQFDHEG--YYNSCTMK 172 (224)
Q Consensus 131 ~~~~~~l~~~~~d~----------------------------------~v~v~d~~~~~~~--~~~~~~~--~~~~~~~~ 172 (224)
+|||++|+.++.|. .|++||+.+++.. ..+.... .-..-.+.
T Consensus 177 SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (719)
T 1z68_A 177 SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFS 256 (719)
T ss_dssp CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEE
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEE
Confidence 99999999987652 5789999877643 1111000 00111234
Q ss_pred EEEEeCCCCeEEEEcCC--C--CeEEEEe----CCCCCe
Q psy11351 173 SCCFAGTQDEYVVSGSD--D--FVLYMWR----VPRDDI 203 (224)
Q Consensus 173 ~~~~~~~~~~~l~s~~~--d--~~v~iw~----~~~~~~ 203 (224)
.++|+| +++++++... + ..|.+|| ..+++.
T Consensus 257 ~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 257 WLTWVT-DERVCLQWLKRVQNVSVLSICDFREDWQTWDC 294 (719)
T ss_dssp EEEESS-SSEEEEEEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred EeEEeC-CCeEEEEEeccccCeEEEEEEcccCCCCCCce
Confidence 578898 5887776332 2 3588899 766654
No 158
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.81 E-value=6.3e-18 Score=144.93 Aligned_cols=147 Identities=13% Similarity=0.108 Sum_probs=125.2
Q ss_pred CCCCcceEEEEEeCCCcEE-EEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVI-SHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+.. +++.++.++.++.+. +||+.+++.....+|...+..++|+|++ ++|++++.++.|++||+.+++....+..|..
T Consensus 344 ~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~ 421 (1045)
T 1k32_A 344 GGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKPTVIERSREA 421 (1045)
T ss_dssp CSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECSSS
T ss_pred eEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCC-CEEEEECCCCeEEEEECCCCceEEeccCCCC
Confidence 345 678899988888898 9999988766555788899999999999 8999999999999999999987777778888
Q ss_pred CeEEEEEcCCCCCeEEEecCC----------CcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEE
Q psy11351 81 PFHAVMFNPVEARLVATANSK----------DGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYN 150 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~d----------g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d 150 (224)
.+.+++|+| ++++|++++.+ +.|++||+.+++ ...+..+...+..++|+|+|++|+.++.++...+|+
T Consensus 422 ~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 422 MITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp CCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred CccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcc
Confidence 999999999 88888877654 389999999875 666777888899999999999999998888777776
Q ss_pred CC
Q psy11351 151 TR 152 (224)
Q Consensus 151 ~~ 152 (224)
..
T Consensus 500 ~~ 501 (1045)
T 1k32_A 500 RV 501 (1045)
T ss_dssp SS
T ss_pred hh
Confidence 53
No 159
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.81 E-value=8.4e-18 Score=123.56 Aligned_cols=188 Identities=12% Similarity=0.061 Sum_probs=148.1
Q ss_pred CCcceEEEEEeCCCcEEEEeCCCCceeeEEe-cc-CCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCC-c
Q psy11351 4 GDPIKVLRVIGNDDHVISHDMASGDPIDFYL-HE-RPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNS-G 80 (224)
Q Consensus 4 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~-~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~ 80 (224)
+.|+++|++++.|+.|.+||.++++.+..+. +. ..+.++.++|+| +++++ .++.|..||. +++.+..+..+. .
T Consensus 2 ~~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG-~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~ 77 (276)
T 3no2_A 2 SSPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG-EILFS--YSKGAKMITR-DGRELWNIAAPAGC 77 (276)
T ss_dssp -CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS-CEEEE--CBSEEEEECT-TSCEEEEEECCTTC
T ss_pred CCCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC-CEEEe--CCCCEEEECC-CCCEEEEEcCCCCc
Confidence 4678999999999999999999999988884 33 478999999999 78873 4788999998 788888887643 4
Q ss_pred CeEEEEEcCCCCCeEEEecC-CCcEEEEecCCCceeeEeec------CCCceeEEEEcCCCCeEeeeecCCCcEEEECCC
Q psy11351 81 PFHAVMFNPVEARLVATANS-KDGIALYDTRKPKEVLMQYG------SCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~-dg~v~i~d~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~ 153 (224)
.+.++.+.+ +++++++.+. ++.+..+|. +++.+..+.. +......+++.++|+++++...++.|..||..
T Consensus 78 ~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 78 EMQTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp EEEEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-
T ss_pred cccccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-
Confidence 688999999 8888888776 778888885 5655555431 11234566789999999999999999999998
Q ss_pred CCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 154 SSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
|+.+.++........ ....+ ++++++++..+++|..+|..+|+..
T Consensus 155 G~~~w~~~~~~~~~~-----~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 155 GQLLNSVKLSGTPFS-----SAFLD-NGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp SCEEEEEECSSCCCE-----EEECT-TSCEEEECBTTSEEEEECTTTCCEE
T ss_pred CCEEEEEECCCCccc-----eeEcC-CCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 999888854444333 33444 7899999888889999999988773
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.80 E-value=4.5e-17 Score=124.01 Aligned_cols=192 Identities=8% Similarity=0.070 Sum_probs=125.5
Q ss_pred cceEEEEEe-CCCcEEEEeCCCCceee----EEec-----------cCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc
Q psy11351 6 PIKVLRVIG-NDDHVISHDMASGDPID----FYLH-----------ERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR 69 (224)
Q Consensus 6 ~~~~l~~~~-~dg~i~iwd~~~~~~~~----~~~~-----------~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 69 (224)
+++++++++ .+++|.+|++.....+. ...+ ...+.+++|+|++..++++...++.|.+|++...
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN 187 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence 355555555 68899999997543221 1112 2345889999999435566666899999998754
Q ss_pred cc------c-------eeeccCCcCeEEEEEcCCCCCeEEEec-CCCcEEEEecCCCce--eeEee---cCCCceeEEEE
Q psy11351 70 EE------A-------TELAVNSGPFHAVMFNPVEARLVATAN-SKDGIALYDTRKPKE--VLMQY---GSCESCMSIRF 130 (224)
Q Consensus 70 ~~------~-------~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~--~~~~~---~~~~~v~~~~~ 130 (224)
.. + ............++|+| +++++++++ .++.|.+||+.+++. ...+. .+......++|
T Consensus 188 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~ 266 (361)
T 3scy_A 188 ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHL 266 (361)
T ss_dssp CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEE
T ss_pred CCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEE
Confidence 32 1 11123345678999999 777666655 689999999986643 12222 23345689999
Q ss_pred cCCCCeEeeeecC--CCcEEEECC--CCCc--ceecccCCcccceeeeEEEEeCCCCeEEEEcC-CCCeEEEE--eCCCC
Q psy11351 131 NKAGTQLLGLRRR--LPPVLYNTR--SSSP--VAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS-DDFVLYMW--RVPRD 201 (224)
Q Consensus 131 ~~~~~~l~~~~~d--~~v~v~d~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~v~iw--~~~~~ 201 (224)
+|+|++|+++..+ +.|.+|++. +++. +..+.....+. .++|+| ++++|++++ .++.|.+| |..++
T Consensus 267 spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~-----~~~~sp-dg~~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 267 SPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPR-----NFIITP-NGKYLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp CTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCC-----EEEECT-TSCEEEEEETTTTEEEEEEECTTTC
T ss_pred CCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCc-----eEEECC-CCCEEEEEECCCCCEEEEEEECCCC
Confidence 9999998776654 789999986 3442 22222222222 467888 687766665 67899996 44566
Q ss_pred CeE
Q psy11351 202 DIY 204 (224)
Q Consensus 202 ~~~ 204 (224)
+..
T Consensus 341 ~~~ 343 (361)
T 3scy_A 341 LLT 343 (361)
T ss_dssp CEE
T ss_pred cEe
Confidence 654
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=4e-18 Score=137.71 Aligned_cols=182 Identities=14% Similarity=0.066 Sum_probs=128.6
Q ss_pred eEEEEEeC---CCcEEEEeCCC---CceeeEEeccCCeeEEEEcCCCCcE-EEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 8 KVLRVIGN---DDHVISHDMAS---GDPIDFYLHERPVYGLSVDPSQDAI-FASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 8 ~~l~~~~~---dg~i~iwd~~~---~~~~~~~~~~~~v~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+++++++. +...+||.+.. +... .+.....+...+|+|++... +++++.+ .+.+||+.+++....... ..
T Consensus 76 ~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~-~~ 152 (582)
T 3o4h_A 76 RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARL-PG 152 (582)
T ss_dssp EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEE-SS
T ss_pred eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecC-CC
Confidence 77777775 45556655432 2222 33222234466788877444 4445544 555999998875544433 33
Q ss_pred CeEEEEEcCCCCCeEEEecCC----CcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCC--CcEEEECCCC
Q psy11351 81 PFHAVMFNPVEARLVATANSK----DGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRL--PPVLYNTRSS 154 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~d----g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~v~d~~~~ 154 (224)
.+++|+| +++++++++.+ +.|++||+.+++. ..+..+...+..++|+|||+.|+++..++ .|++||+.++
T Consensus 153 --~~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~~-~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 153 --FGFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGGL-RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG 228 (582)
T ss_dssp --CEEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCCC-EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC
T ss_pred --ceEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCCc-eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC
Confidence 7899999 89999987766 7799999987754 46677888899999999999999877888 7999999988
Q ss_pred Ccceec-ccCCccccee---eeEEEEeCCCCeEEEEcCCCCeEEEEeC
Q psy11351 155 SPVAQF-DHEGYYNSCT---MKSCCFAGTQDEYVVSGSDDFVLYMWRV 198 (224)
Q Consensus 155 ~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~l~s~~~d~~v~iw~~ 198 (224)
+.. .+ .+...+..+. ....+|+| ++.++++++.|+.+++|++
T Consensus 229 ~~~-~~~~~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 229 SVE-DLELPSKDFSSYRPTAITWLGYLP-DGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CEE-ECCCSCSHHHHHCCSEEEEEEECT-TSCEEEEEEETTEEEEEET
T ss_pred cEE-EccCCCcChhhhhhccccceeEcC-CCcEEEEEEcCCcEEEEEE
Confidence 776 44 4444444332 22234888 5788999999999999999
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=6.7e-16 Score=117.87 Aligned_cols=194 Identities=13% Similarity=0.045 Sum_probs=130.7
Q ss_pred CCCCcceE--EEEEe-------------CCCcEEEEeCC-CCceeeEEe-----ccCCeeEEEEcCCCCcEEEEec-CCC
Q psy11351 2 ASGDPIKV--LRVIG-------------NDDHVISHDMA-SGDPIDFYL-----HERPVYGLSVDPSQDAIFASAC-DDG 59 (224)
Q Consensus 2 a~~~~~~~--l~~~~-------------~dg~i~iwd~~-~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~-~d~ 59 (224)
+++++|++ ++++. .+|++.+|++. +++...... +...+.+++|+|+| ++++++. .++
T Consensus 89 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~ 167 (365)
T 1jof_A 89 DADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE-TYLYSADLTAN 167 (365)
T ss_dssp CTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTT
T ss_pred EECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC-CEEEEEcCCCC
Confidence 56677884 44553 68999999997 466544332 45689999999999 6666554 468
Q ss_pred EEEEEecC-Ccccc--eeec--cCCcCeEEEEEcCCCCCeEEEec-CCCcEEEEecC--CCceee---Eeec-------C
Q psy11351 60 RVLLFDTR-SREEA--TELA--VNSGPFHAVMFNPVEARLVATAN-SKDGIALYDTR--KPKEVL---MQYG-------S 121 (224)
Q Consensus 60 ~i~iwd~~-~~~~~--~~~~--~~~~~i~~~~~~~~~~~~l~~~~-~dg~v~i~d~~--~~~~~~---~~~~-------~ 121 (224)
.|.+||+. +++.. ..+. .+......++|+| +++++++++ .++.|.+|++. +++... .+.. +
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~ 246 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDR 246 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCB
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCc
Confidence 99999998 66532 2232 2355689999999 787777665 47899999875 343221 1211 1
Q ss_pred CC------ceeEEE-EcCCCCeEeeeecCC------CcEEEECC-CCCccee---cc-cCCcccceeeeEEEEeCC--CC
Q psy11351 122 CE------SCMSIR-FNKAGTQLLGLRRRL------PPVLYNTR-SSSPVAQ---FD-HEGYYNSCTMKSCCFAGT--QD 181 (224)
Q Consensus 122 ~~------~v~~~~-~~~~~~~l~~~~~d~------~v~v~d~~-~~~~~~~---~~-~~~~~~~~~~~~~~~~~~--~~ 181 (224)
.. .+..++ |+|+|++|++++.+. .|.+|++. +++.... .. +...... ++|+|. ++
T Consensus 247 ~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~-----~a~sp~~~dg 321 (365)
T 1jof_A 247 DPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHS-----NAVSPCPWSD 321 (365)
T ss_dssp CTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTC-----CCEEECTTCT
T ss_pred ccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCccc-----ceecCCCcCC
Confidence 21 578999 999999988776433 79999996 5554321 21 2223343 455663 47
Q ss_pred eEEEEcCC-CCeEEEEeCCCCC
Q psy11351 182 EYVVSGSD-DFVLYMWRVPRDD 202 (224)
Q Consensus 182 ~~l~s~~~-d~~v~iw~~~~~~ 202 (224)
++|++++. ++.|.+|++....
T Consensus 322 ~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 322 EWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp TEEEEECSSSCEEEEEEEETTE
T ss_pred CEEEEEEcCCCeEEEEEEchhh
Confidence 78877765 5899999998763
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.78 E-value=1.3e-18 Score=143.70 Aligned_cols=197 Identities=12% Similarity=0.065 Sum_probs=133.8
Q ss_pred CCCCcceEEEEEeC---------CCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccc
Q psy11351 2 ASGDPIKVLRVIGN---------DDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEA 72 (224)
Q Consensus 2 a~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 72 (224)
+.+++|++|+.++. +++|++||+.+++.+........+..++|+|+| +.|+.+. ++.|++||+.+++..
T Consensus 66 ~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 66 GLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPF 143 (719)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCE
T ss_pred EECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcE
Confidence 45778999998876 789999999998873212223578999999999 7788775 789999999887754
Q ss_pred eee-ccCCcCe-----------------EEEEEcCCCCCeEEEecCCC--------------------------------
Q psy11351 73 TEL-AVNSGPF-----------------HAVMFNPVEARLVATANSKD-------------------------------- 102 (224)
Q Consensus 73 ~~~-~~~~~~i-----------------~~~~~~~~~~~~l~~~~~dg-------------------------------- 102 (224)
... .++...+ .+++|+| +++.|++++.|.
T Consensus 144 ~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~ 222 (719)
T 1z68_A 144 QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNP 222 (719)
T ss_dssp ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCC
T ss_pred EEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCC
Confidence 332 2222222 4899999 889998877542
Q ss_pred --cEEEEecCCCcee--eE------eecCCCceeEEEEcCCCCeEeeeecCC----CcEEEE----CCCCCcceec----
Q psy11351 103 --GIALYDTRKPKEV--LM------QYGSCESCMSIRFNKAGTQLLGLRRRL----PPVLYN----TRSSSPVAQF---- 160 (224)
Q Consensus 103 --~v~i~d~~~~~~~--~~------~~~~~~~v~~~~~~~~~~~l~~~~~d~----~v~v~d----~~~~~~~~~~---- 160 (224)
.|++||+.+++.. .. +..+...+..++|+||++.+++..... .|.+|| +.+++....+
T Consensus 223 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~ 302 (719)
T 1z68_A 223 VVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIE 302 (719)
T ss_dssp EEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEE
T ss_pred eeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEeccc
Confidence 7889999877532 11 224777899999999987777644332 388899 7777655444
Q ss_pred -ccCCcccceeeeEEEEeCCCCeEEE--EcCCCC--eEEEEeCCCCC
Q psy11351 161 -DHEGYYNSCTMKSCCFAGTQDEYVV--SGSDDF--VLYMWRVPRDD 202 (224)
Q Consensus 161 -~~~~~~~~~~~~~~~~~~~~~~~l~--s~~~d~--~v~iw~~~~~~ 202 (224)
.+.+.+.........|+| +++.++ +...++ .|.+||+.+++
T Consensus 303 ~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 303 ESRTGWAGGFFVSTPVFSY-DAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp ECSSSCSSSSSCCCCEECT-TSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred ccCCceEccccCCccEECC-CCCeEEEEEEccCCceEEEEEECCCCc
Confidence 233444310011356788 566433 344444 67778877665
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.77 E-value=5.5e-16 Score=114.27 Aligned_cols=188 Identities=12% Similarity=0.196 Sum_probs=135.6
Q ss_pred CCcceEEEEEeC-CCcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec--cC
Q psy11351 4 GDPIKVLRVIGN-DDHVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA--VN 78 (224)
Q Consensus 4 ~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~ 78 (224)
.+.++++++... ++.|++|| .+++.+..+ .+...+.+++++|++ +++++...++.|.+||.. ++.+..+. .+
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~ 162 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQN-GNVLHKFGCSKH 162 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEEECTTT
T ss_pred cCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCC-CCEEEEeCCCCc
Confidence 345666666643 88999999 566666666 344678999999998 788888888999999964 44444443 33
Q ss_pred CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecC--CCceeEEEEcCCCCeEeeeecCC-CcEEEECCCCC
Q psy11351 79 SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGS--CESCMSIRFNKAGTQLLGLRRRL-PPVLYNTRSSS 155 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~-~v~v~d~~~~~ 155 (224)
...+..+++++ +++++++...++.|++||.. ++.+..+... ...+..++++++|+++++...++ .|.+||. +++
T Consensus 163 ~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~ 239 (286)
T 1q7f_A 163 LEFPNGVVVND-KQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQ 239 (286)
T ss_dssp CSSEEEEEECS-SSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSC
T ss_pred cCCcEEEEECC-CCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCC
Confidence 45689999999 78888888888999999975 4444444332 35788999999998888877775 8999995 466
Q ss_pred cceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCC
Q psy11351 156 PVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 201 (224)
.+..+....... ....++++| +++++++ +.|+.|++|++...
T Consensus 240 ~~~~~~~~~~~~--~~~~i~~~~-~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 240 LISALESKVKHA--QCFDVALMD-DGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEEEESSCCS--CEEEEEEET-TTEEEEE-ETTTEEEEEECSCC
T ss_pred EEEEEcccCCCC--cceeEEECC-CCcEEEE-CCCCeEEEEEcccc
Confidence 665553211111 123467777 6887777 56899999998664
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.76 E-value=2e-17 Score=137.20 Aligned_cols=193 Identities=11% Similarity=0.073 Sum_probs=132.2
Q ss_pred CCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccC-----CeeEEEEcCCCCcEEEEecCC---------CEEEEEecC
Q psy11351 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHER-----PVYGLSVDPSQDAIFASACDD---------GRVLLFDTR 67 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~-----~v~~~~~~~~~~~~l~s~~~d---------~~i~iwd~~ 67 (224)
...++++++++ |++|++||+.+++....+ +|.. ...++.|+|+| +.|+.++.+ +.+.+||+.
T Consensus 24 w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~~ 100 (740)
T 4a5s_A 24 WISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLN 100 (740)
T ss_dssp ECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCC-CEEEEEECCeeeEEEccceEEEEEECC
Confidence 34667888886 999999999999987766 4432 23458899999 788888766 567799999
Q ss_pred CcccceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee-cCCCce-----------------eEEE
Q psy11351 68 SREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY-GSCESC-----------------MSIR 129 (224)
Q Consensus 68 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~-~~~~~v-----------------~~~~ 129 (224)
+++.. .+..+...+...+|+| +++.|+.+ .++.|++||+.+++...... ++...+ ..+.
T Consensus 101 ~~~~~-~l~~~~~~~~~~~~SP-dG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~ 177 (740)
T 4a5s_A 101 KRQLI-TEERIPNNTQWVTWSP-VGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALW 177 (740)
T ss_dssp TTEEC-CSSCCCTTEEEEEECS-STTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEE
T ss_pred CCcEE-EcccCCCcceeeEECC-CCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceE
Confidence 98754 4666777899999999 88888887 56899999998775432211 222222 3589
Q ss_pred EcCCCCeEeeeecCC------------------------------------CcEEEECCC---CCc--ceecccCCc--c
Q psy11351 130 FNKAGTQLLGLRRRL------------------------------------PPVLYNTRS---SSP--VAQFDHEGY--Y 166 (224)
Q Consensus 130 ~~~~~~~l~~~~~d~------------------------------------~v~v~d~~~---~~~--~~~~~~~~~--~ 166 (224)
|||||+.|+..+.|. .|++||+.+ ++. ...+..... -
T Consensus 178 wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~ 257 (740)
T 4a5s_A 178 WSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLI 257 (740)
T ss_dssp ECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHT
T ss_pred ECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCC
Confidence 999999998875432 366777776 531 122211000 0
Q ss_pred cceeeeEEEEeCCCCeEEEEc----CCCCeEEEEeCCCCC
Q psy11351 167 NSCTMKSCCFAGTQDEYVVSG----SDDFVLYMWRVPRDD 202 (224)
Q Consensus 167 ~~~~~~~~~~~~~~~~~l~s~----~~d~~v~iw~~~~~~ 202 (224)
..-.+..+.|+| +++.++.. +.+..|++||+.+++
T Consensus 258 ~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 258 GDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp SCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred CCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 112244577888 68865543 334589999999887
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=2.7e-16 Score=118.42 Aligned_cols=200 Identities=12% Similarity=0.083 Sum_probs=142.1
Q ss_pred CCCCCcceEEEEEeCC------------------------CcEEEEeCCCCceeeEEe--ccCCeeEEEEcCCCCcEEEE
Q psy11351 1 MASGDPIKVLRVIGND------------------------DHVISHDMASGDPIDFYL--HERPVYGLSVDPSQDAIFAS 54 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~d------------------------g~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s 54 (224)
||++..|+++++...+ ++|.+||..+++.+..++ +-.....++++|++ +++++
T Consensus 29 va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g-~l~v~ 107 (329)
T 3fvz_A 29 VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG-NYWVT 107 (329)
T ss_dssp EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS-CEEEE
T ss_pred EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC-CEEEE
Confidence 4667788888888877 479999999999877663 44578999999999 78899
Q ss_pred ecCCCEEEEEecCCcc-cceee---------ccCCcCeEEEEEcCCCCCeEEEec-CCCcEEEEecCCCceeeEeecC--
Q psy11351 55 ACDDGRVLLFDTRSRE-EATEL---------AVNSGPFHAVMFNPVEARLVATAN-SKDGIALYDTRKPKEVLMQYGS-- 121 (224)
Q Consensus 55 ~~~d~~i~iwd~~~~~-~~~~~---------~~~~~~i~~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~-- 121 (224)
...++.|++||..... .+..+ ..+-.....++++|.++.++++.+ .++.|++|| .+++....+...
T Consensus 108 d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~ 186 (329)
T 3fvz_A 108 DVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESS 186 (329)
T ss_dssp ETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECC
T ss_pred ECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCC
Confidence 9999999999976442 34444 233446889999985677777776 689999999 445554444321
Q ss_pred --------CCceeEEEEcCC-CCeEeeeecCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCC-----CCeEEEEc
Q psy11351 122 --------CESCMSIRFNKA-GTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGT-----QDEYVVSG 187 (224)
Q Consensus 122 --------~~~v~~~~~~~~-~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~s~ 187 (224)
-.....++++|+ +..+++...++.|++|+..+++.+..+.....-. ....++++|. +++.+++.
T Consensus 187 ~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~--~~~~~~~~pg~~~~~~g~~~v~~ 264 (329)
T 3fvz_A 187 GSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGR--NVFAISYIPGFLFAVNGKPYFGD 264 (329)
T ss_dssp SSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTT--CEEEEEEETTEEEEEECCCCTTC
T ss_pred CCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCC--CcceeeecCCEEEEeCCCEEecc
Confidence 123789999998 6666666778889999999888877773211111 1123555550 23333444
Q ss_pred CCCCeEEEEeCCCCCeE
Q psy11351 188 SDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 188 ~~d~~v~iw~~~~~~~~ 204 (224)
..+..|++|+..+++..
T Consensus 265 ~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 265 QEPVQGFVMNFSSGEII 281 (329)
T ss_dssp SCCCCEEEEETTTCCEE
T ss_pred CCCcEEEEEEcCCCeEE
Confidence 45669999999988765
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.75 E-value=1.6e-16 Score=121.95 Aligned_cols=195 Identities=10% Similarity=-0.029 Sum_probs=136.7
Q ss_pred CCCCcceEEEEEeC-CC--cEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeecc
Q psy11351 2 ASGDPIKVLRVIGN-DD--HVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAV 77 (224)
Q Consensus 2 a~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 77 (224)
+.+.+|++|+.++. ++ .|.+||+.+++..... ++...+....|+|++ +.|+.++.++.|++||+.+++....+..
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC-CEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 35678898888887 67 4888999998877666 455555678899999 7888888899999999999886665555
Q ss_pred CCcCeEEEE--EcCCCCCeEEE----------------------ecCCCcEEEEecCCCceeeEeecCCCceeEEEEcC-
Q psy11351 78 NSGPFHAVM--FNPVEARLVAT----------------------ANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNK- 132 (224)
Q Consensus 78 ~~~~i~~~~--~~~~~~~~l~~----------------------~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~- 132 (224)
+...+.... ++| ++.+++. ...+..|.+||+.+++ ...+..+...+..++|+|
T Consensus 121 ~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 121 PAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE-STVILQENQWLGHPIYRPY 198 (388)
T ss_dssp CTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC-EEEEEEESSCEEEEEEETT
T ss_pred hhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc-eEEeecCCccccccEECCC
Confidence 555444443 478 7777763 2345779999999875 445555667789999999
Q ss_pred CCCeEeeeecC------CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCC-----CCeEEEEeCCCC
Q psy11351 133 AGTQLLGLRRR------LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSD-----DFVLYMWRVPRD 201 (224)
Q Consensus 133 ~~~~l~~~~~d------~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-----d~~v~iw~~~~~ 201 (224)
+|+.|+....+ ..|.++|+.+++......+... .......|+| +++.|+..+. +..|++||+.++
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~---~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEG---ESCTHEFWVP-DGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTT---EEEEEEEECT-TSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCC---cccccceECC-CCCEEEEEecCCCCCcceEEEEecCCC
Confidence 99988876653 3677778765544333232211 1123467888 6776544322 224999999998
Q ss_pred Ce
Q psy11351 202 DI 203 (224)
Q Consensus 202 ~~ 203 (224)
+.
T Consensus 275 ~~ 276 (388)
T 3pe7_A 275 EN 276 (388)
T ss_dssp CE
T ss_pred ce
Confidence 75
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.74 E-value=3.8e-16 Score=117.59 Aligned_cols=196 Identities=13% Similarity=0.147 Sum_probs=143.7
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCCc-eeeEEe----------ccCCeeEEEEcC-CCCcEEEEec-CCCEEEEEecC
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASGD-PIDFYL----------HERPVYGLSVDP-SQDAIFASAC-DDGRVLLFDTR 67 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~----------~~~~v~~~~~~~-~~~~~l~s~~-~d~~i~iwd~~ 67 (224)
||+++.|+++++...++.|++||..... .+..++ +-.....++++| ++ +++++.+ .++.|++|| .
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~~~I~~~~-~ 173 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCNSRIVQFS-P 173 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSCCEEEEEC-T
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCCCeEEEEc-C
Confidence 3567788888888889999999987553 444442 233688999999 66 7888886 689999999 5
Q ss_pred Ccccceeecc----------CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee--cCCCceeEEEEcC---
Q psy11351 68 SREEATELAV----------NSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY--GSCESCMSIRFNK--- 132 (224)
Q Consensus 68 ~~~~~~~~~~----------~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~--- 132 (224)
+++.+..+.. +-.....++++|+++.++++...++.|++||..+++.+..+. .+...+..++|+|
T Consensus 174 ~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~ 253 (329)
T 3fvz_A 174 SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFL 253 (329)
T ss_dssp TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEE
T ss_pred CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEE
Confidence 5665555532 123478999999438888888899999999998777666653 3556788999999
Q ss_pred ---CCCeEeeeecCCCcEEEECCCCCcceeccc-CCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCC
Q psy11351 133 ---AGTQLLGLRRRLPPVLYNTRSSSPVAQFDH-EGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 133 ---~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 201 (224)
+|+..++...+..+++|+..+++.+..+.. ...... ...++++| ++.++++...++.|++|++...
T Consensus 254 ~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~--p~~ia~~~-dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 254 FAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDM--PHDIVASE-DGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSS--EEEEEECT-TSEEEEEESSSCCEEEEEEEEC
T ss_pred EEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCC--eeEEEECC-CCCEEEEECCCCEEEEEeCCcc
Confidence 444444445566899999999988887731 122111 23467777 6889999999999999997643
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=1.3e-16 Score=130.62 Aligned_cols=193 Identities=8% Similarity=-0.023 Sum_probs=131.6
Q ss_pred CcceE-EEEEeC-CCcEEEEeCC--C-CceeeEEe-----ccCCeeEEEEcCCCCcEEEEecCC----------CEEEEE
Q psy11351 5 DPIKV-LRVIGN-DDHVISHDMA--S-GDPIDFYL-----HERPVYGLSVDPSQDAIFASACDD----------GRVLLF 64 (224)
Q Consensus 5 ~~~~~-l~~~~~-dg~i~iwd~~--~-~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~d----------~~i~iw 64 (224)
++|+. |+.++. +..|.++++. + ++...... |...+.+++|+|+| +.|+.++.+ ..|++|
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEE
Confidence 45666 665543 5667777776 3 55444444 66788999999999 788887776 689999
Q ss_pred ecCC------cccceeec-cCCcCeEEEEEcCCCCCeEEEecCC--------CcEEEEecC-CC--ceeeEee-cCCCce
Q psy11351 65 DTRS------REEATELA-VNSGPFHAVMFNPVEARLVATANSK--------DGIALYDTR-KP--KEVLMQY-GSCESC 125 (224)
Q Consensus 65 d~~~------~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d--------g~v~i~d~~-~~--~~~~~~~-~~~~~v 125 (224)
|+.+ ++ ...+. .+...+..++|+| +++.|+.++.+ ..|.+||+. ++ .....+. .+...+
T Consensus 167 ~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~ 244 (662)
T 3azo_A 167 PLDGSAAADRSA-VRELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAI 244 (662)
T ss_dssp ETTSTTTTCGGG-SEESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCE
T ss_pred ECCCCccccCCc-eeEEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceE
Confidence 9987 54 34444 5556788899999 88888877644 379999998 45 1333333 457889
Q ss_pred eEEEEcCCCCeEeeeecCCC--cEEEECCCCCcceecccCCcccc----eeeeEEEEeCCCCeEEEEcCCCCeEEEE--e
Q psy11351 126 MSIRFNKAGTQLLGLRRRLP--PVLYNTRSSSPVAQFDHEGYYNS----CTMKSCCFAGTQDEYVVSGSDDFVLYMW--R 197 (224)
Q Consensus 126 ~~~~~~~~~~~l~~~~~d~~--v~v~d~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~s~~~d~~v~iw--~ 197 (224)
..+.|+|||++++++..++. |++||+.+++......+...+.. .....++|+| ++.++++++. +.+++| |
T Consensus 245 ~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 245 AQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLA-NGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp EEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECT-TSCEEEEEBS-SSCEEEEEE
T ss_pred cceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeC-CCEEEEEEEc-CccEEEEEE
Confidence 99999999997777777774 55556656654433332222211 1112366777 6888888888 888888 6
Q ss_pred CCCCC
Q psy11351 198 VPRDD 202 (224)
Q Consensus 198 ~~~~~ 202 (224)
+.+++
T Consensus 323 ~~~~~ 327 (662)
T 3azo_A 323 PESGE 327 (662)
T ss_dssp TTTTE
T ss_pred CCCCc
Confidence 55554
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.74 E-value=1e-14 Score=107.47 Aligned_cols=190 Identities=11% Similarity=0.067 Sum_probs=136.8
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEe-------ccCCeeEEEE-cCCCCcEEEEecC-CCEEEEEecCCcccc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYL-------HERPVYGLSV-DPSQDAIFASACD-DGRVLLFDTRSREEA 72 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~v~~~~~-~~~~~~~l~s~~~-d~~i~iwd~~~~~~~ 72 (224)
+.+..++++++...++.|.+||.+ ++.+..+. +...+.++++ .+++ +++++... ++.|.+|| .+++.+
T Consensus 36 ~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d-~~g~~~ 112 (286)
T 1q7f_A 36 AVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYN-QYGQFV 112 (286)
T ss_dssp EECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEECGGGCEEEEEC-TTSCEE
T ss_pred EECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCC-eEEEEcCCCCCEEEEEC-CCCcEE
Confidence 456678888888889999999987 55555542 3357899999 4666 66666643 78999999 556655
Q ss_pred eeec-cCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee--cCCCceeEEEEcCCCCeEeeeecCCCcEEE
Q psy11351 73 TELA-VNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY--GSCESCMSIRFNKAGTQLLGLRRRLPPVLY 149 (224)
Q Consensus 73 ~~~~-~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~ 149 (224)
..+. .+...+..++++| +++++++...++.|.+||.. ++....+. .+...+..++++|+|+.+++...++.|++|
T Consensus 113 ~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 190 (286)
T 1q7f_A 113 RKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVF 190 (286)
T ss_dssp EEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEE
T ss_pred EEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEE
Confidence 5553 2345689999999 77888888888999999965 44444443 344568999999999987777778899999
Q ss_pred ECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCC-eEEEEeCCC
Q psy11351 150 NTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDF-VLYMWRVPR 200 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-~v~iw~~~~ 200 (224)
|.. ++.+..+...+... ....+++++ +++++++...++ .|.+|+...
T Consensus 191 ~~~-g~~~~~~~~~g~~~--~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 191 NYE-GQYLRQIGGEGITN--YPIGVGINS-NGEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp ETT-CCEEEEESCTTTSC--SEEEEEECT-TCCEEEEECSSSCEEEEECTTS
T ss_pred cCC-CCEEEEEccCCccC--CCcEEEECC-CCCEEEEeCCCCEEEEEECCCC
Confidence 974 55555553322111 123467777 688888887776 999999643
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=1.5e-16 Score=132.02 Aligned_cols=197 Identities=10% Similarity=-0.000 Sum_probs=134.4
Q ss_pred CCCcceEEEEEeCC---------CcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccce
Q psy11351 3 SGDPIKVLRVIGND---------DHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73 (224)
Q Consensus 3 ~~~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 73 (224)
.+.+|++|+.++.+ +.+.+||+.+++......|...+...+|+|+| +.|+.+. ++.|++||+.+++..+
T Consensus 69 ~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNLPSYR 146 (740)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSST-TCEEEEE-TTEEEEESSTTSCCEE
T ss_pred ECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCC-CEEEEEE-CCeEEEEECCCCceEE
Confidence 36789999998876 56679999999877666788899999999999 7777774 6899999998876433
Q ss_pred e-eccCCcCe-----------------EEEEEcCCCCCeEEEecCCC---------------------------------
Q psy11351 74 E-LAVNSGPF-----------------HAVMFNPVEARLVATANSKD--------------------------------- 102 (224)
Q Consensus 74 ~-~~~~~~~i-----------------~~~~~~~~~~~~l~~~~~dg--------------------------------- 102 (224)
. ..++...+ ..+.|+| +++.|+.++.|.
T Consensus 147 lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~ 225 (740)
T 4a5s_A 147 ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVN 225 (740)
T ss_dssp CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCC
T ss_pred EcCCCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcC
Confidence 2 12322222 3589999 888888764221
Q ss_pred ---cEEEEecCC---Cc--eeeEee------cCCCceeEEEEcCCCCeEeeeec----CCCcEEEECCCCC----c--ce
Q psy11351 103 ---GIALYDTRK---PK--EVLMQY------GSCESCMSIRFNKAGTQLLGLRR----RLPPVLYNTRSSS----P--VA 158 (224)
Q Consensus 103 ---~v~i~d~~~---~~--~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~----d~~v~v~d~~~~~----~--~~ 158 (224)
.|++||+.+ ++ ....+. ++...+..++|+|||+.++.... +..|++||+.+++ + ..
T Consensus 226 ~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~ 305 (740)
T 4a5s_A 226 PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVAR 305 (740)
T ss_dssp CEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGG
T ss_pred CeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEE
Confidence 478899887 63 223333 26778999999999996665433 2369999999887 1 22
Q ss_pred ec---ccCCcccceeeeEEEEeCCCCeEEE-EcC-CC--CeEEEEeCCCCCe
Q psy11351 159 QF---DHEGYYNSCTMKSCCFAGTQDEYVV-SGS-DD--FVLYMWRVPRDDI 203 (224)
Q Consensus 159 ~~---~~~~~~~~~~~~~~~~~~~~~~~l~-s~~-~d--~~v~iw~~~~~~~ 203 (224)
.+ .+.+.+.........|+| |++.|+ ..+ .+ ..|++||+.+++.
T Consensus 306 ~l~~~~~~~~v~~~~~~~p~fsp-DG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 306 QHIEMSTTGWVGRFRPSEPHFTL-DGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp CEEEECSSSCSSSSSCCCCEECT-TSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred EeeeccCCceEccCcCCCceEcC-CCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 21 244443310012356888 677655 444 33 4788899887654
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.72 E-value=3e-15 Score=114.15 Aligned_cols=210 Identities=11% Similarity=0.054 Sum_probs=134.0
Q ss_pred CCCCCcceEEEEEe----------CCCcEEEEeCCCCceeeEEe-------ccCCeeEEEEcCCCCcEEEEecC--CCEE
Q psy11351 1 MASGDPIKVLRVIG----------NDDHVISHDMASGDPIDFYL-------HERPVYGLSVDPSQDAIFASACD--DGRV 61 (224)
Q Consensus 1 ~a~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~s~~~--d~~i 61 (224)
|++++++++++++. .+++|.+||..+.+.+..+. +......++++|++ ++|+++.. +++|
T Consensus 55 i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg-~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 55 VQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDG-KFIVLQNASPATSI 133 (361)
T ss_dssp EEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTS-SEEEEEEESSSEEE
T ss_pred eEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCC-CEEEEECCCCCCeE
Confidence 45678888888876 36789999999988877662 23567889999999 67777653 6899
Q ss_pred EEEecCCccccee-eccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCC-Ccee------------------------
Q psy11351 62 LLFDTRSREEATE-LAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRK-PKEV------------------------ 115 (224)
Q Consensus 62 ~iwd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~-~~~~------------------------ 115 (224)
.+||+.+++.+.. +... . ...+.+.|.+...+++.+.||.+.+|++.. ++..
T Consensus 134 ~v~d~~~~~~~~~~i~~~-~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 211 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAA-G-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDK 211 (361)
T ss_dssp EEEETTTTEEEEEEGGGT-T-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECS
T ss_pred EEEECCCCcEEEEEecCC-C-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccC
Confidence 9999999887766 4321 1 122334442334444444555555544432 1111
Q ss_pred -----------------------e--Eee--c----C----CCceeEEEEcCCCCeEeeeec-----------CCCcEEE
Q psy11351 116 -----------------------L--MQY--G----S----CESCMSIRFNKAGTQLLGLRR-----------RLPPVLY 149 (224)
Q Consensus 116 -----------------------~--~~~--~----~----~~~v~~~~~~~~~~~l~~~~~-----------d~~v~v~ 149 (224)
. .+. . . ......++|+|+++.++++.. .+.|.+|
T Consensus 212 ~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~vi 291 (361)
T 2oiz_A 212 DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM 291 (361)
T ss_dssp SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEE
Confidence 0 000 0 0 001112788999888877643 3469999
Q ss_pred ECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCC--CeEeeeeeeEeeCCceeEEEee
Q psy11351 150 NTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRD--DIYVSSDIYVCRHGSLEVSILP 223 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~p 223 (224)
|+.+++.+..+.... ... ++|+| ++++|++++. +.|.+||..++ +.. ......|.....+.+.|
T Consensus 292 D~~t~~~v~~i~~~~-p~~-----ia~sp-dg~~l~v~n~-~~v~v~D~~t~~l~~~--~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 292 DTKTKQRVARIPGRD-ALS-----MTIDQ-QRNLMLTLDG-GNVNVYDISQPEPKLL--RTIEGAAEASLQVQFHP 357 (361)
T ss_dssp ETTTTEEEEEEECTT-CCE-----EEEET-TTTEEEEECS-SCEEEEECSSSSCEEE--EEETTSCSSEEEEEECC
T ss_pred ECCCCcEEEEEecCC-eeE-----EEECC-CCCEEEEeCC-CeEEEEECCCCcceee--EEeccCCCCcEEEEecC
Confidence 999999888884333 444 56666 6888888776 99999999999 654 11111255555666655
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=7.2e-16 Score=126.23 Aligned_cols=191 Identities=9% Similarity=0.002 Sum_probs=128.9
Q ss_pred CCCCcceEEEEEeCC----------CcEEEEeCCC------CceeeEE-eccCCeeEEEEcCCCCcEEEEecCC------
Q psy11351 2 ASGDPIKVLRVIGND----------DHVISHDMAS------GDPIDFY-LHERPVYGLSVDPSQDAIFASACDD------ 58 (224)
Q Consensus 2 a~~~~~~~l~~~~~d----------g~i~iwd~~~------~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d------ 58 (224)
+.+.+|+.|+.++.| .+|++||+.+ ++..... .+...+..++|+|+| +.|+.++.+
T Consensus 136 ~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG-~~la~~~~~~~~~~~ 214 (662)
T 3azo_A 136 VLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDG-RQAVWLAWDHPRMPW 214 (662)
T ss_dssp EEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTS-SEEEEEEECTTCCTT
T ss_pred EECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCC-CEEEEEECCCCCCCC
Confidence 345778889988877 5899999998 6666555 566788899999999 777766644
Q ss_pred --CEEEEEecC-Cc---ccceeeccCCcCeEEEEEcCCCCCeEEEecCCC--cEEEEecCCCceeeEeecCCCc------
Q psy11351 59 --GRVLLFDTR-SR---EEATELAVNSGPFHAVMFNPVEARLVATANSKD--GIALYDTRKPKEVLMQYGSCES------ 124 (224)
Q Consensus 59 --~~i~iwd~~-~~---~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg--~v~i~d~~~~~~~~~~~~~~~~------ 124 (224)
..|.+||+. ++ +.......+...+..+.|+| +++++++++.++ .|.+||+.+++. ..+..+...
T Consensus 215 ~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 215 EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAA-TQLCRREEEFAGPLW 292 (662)
T ss_dssp TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCE-EESSCCSSBSSCCCC
T ss_pred CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCce-eecccccccccCccc
Confidence 489999998 56 43334445567899999999 777888888888 566666655543 333322211
Q ss_pred ---eeEEEEcCCCCeEeeeecCCCcEEE--ECCCCCcceec-ccCCcccceeeeEE-EEeCCCCeEEEEcCCCC--eEEE
Q psy11351 125 ---CMSIRFNKAGTQLLGLRRRLPPVLY--NTRSSSPVAQF-DHEGYYNSCTMKSC-CFAGTQDEYVVSGSDDF--VLYM 195 (224)
Q Consensus 125 ---v~~~~~~~~~~~l~~~~~d~~v~v~--d~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~s~~~d~--~v~i 195 (224)
+..++|+|+++++++++. +.+++| |+.+++ +..+ .+.+.+.. + .+.+ +.-++++++.+. .|..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~-----~~s~~~-~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAA-----TLTVSG-TRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEE-----EEEEET-TEEEEEEEETTEEEEEEE
T ss_pred cccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEE-----EEecCC-CEEEEEEcCCCCCCEEEE
Confidence 467899999999999888 999999 555554 4444 33333322 2 2332 223344445554 5666
Q ss_pred EeCCCCCe
Q psy11351 196 WRVPRDDI 203 (224)
Q Consensus 196 w~~~~~~~ 203 (224)
+|+.+++.
T Consensus 365 ~d~~~g~~ 372 (662)
T 3azo_A 365 LDTVTGRA 372 (662)
T ss_dssp EETTTCCE
T ss_pred EECCCCce
Confidence 67777765
No 174
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.68 E-value=7.9e-16 Score=117.27 Aligned_cols=169 Identities=8% Similarity=0.010 Sum_probs=124.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCc-----------eeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGD-----------PIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE 70 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 70 (224)
|+++...++++|+.+ .+++|+++..+ ......+.. |+.++| ++ ++|+++ .++.|++||+++..
T Consensus 44 ais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~-~~L~v~-~~~~l~v~dv~sl~ 117 (388)
T 1xip_A 44 DISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HG-DQVLVS-TRNALYSLDLEELS 117 (388)
T ss_dssp EEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ET-TEEEEE-ESSEEEEEESSSTT
T ss_pred EEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CC-CEEEEE-cCCcEEEEEchhhh
Confidence 556667789999887 46679865332 223446777 999999 66 788888 88999999998877
Q ss_pred cceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEE
Q psy11351 71 EATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYN 150 (224)
Q Consensus 71 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d 150 (224)
.......++..+.++.+.+ . .+++++.||.+.+||+.+++... +...|++++|+|+| ++.+..||++++|+
T Consensus 118 ~~~~~~~~~~~v~~i~~~~-p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~ 188 (388)
T 1xip_A 118 EFRTVTSFEKPVFQLKNVN-N--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFA 188 (388)
T ss_dssp CEEEEEECSSCEEEEEECS-S--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEE
T ss_pred ccCccceeecceeeEEecC-C--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEc
Confidence 6556667778888888776 3 38888999999999999775432 34689999999999 67888999999999
Q ss_pred CCCCCc--ceecccCCcc-----cceeeeEEEEeCCCCeEEEE
Q psy11351 151 TRSSSP--VAQFDHEGYY-----NSCTMKSCCFAGTQDEYVVS 186 (224)
Q Consensus 151 ~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~s 186 (224)
.+.++. ..++.....+ ....+..++|.+ ++.++++
T Consensus 189 ~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~-~~~flv~ 230 (388)
T 1xip_A 189 WRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILS-PQDFLAV 230 (388)
T ss_dssp EETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESS-SSEEEEE
T ss_pred CCCccccccceecCCcccccccCCCeeEEEEEEec-CCeEEEE
Confidence 877664 4444110000 123455678887 5777765
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.68 E-value=3.5e-15 Score=114.56 Aligned_cols=196 Identities=10% Similarity=-0.035 Sum_probs=130.6
Q ss_pred CCCCcceEEEEEeCC---CcEEEEeCCCCceeeEEeccCC-eeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeecc
Q psy11351 2 ASGDPIKVLRVIGND---DHVISHDMASGDPIDFYLHERP-VYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAV 77 (224)
Q Consensus 2 a~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 77 (224)
+.+++|++|+..... ..|.+||+.+++......+... ...+.|+|++ +.|+.++.++.|++||+.+++.......
T Consensus 42 ~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~~~~~~ 120 (396)
T 3c5m_A 42 CFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDE-RAFFYVKNELNLMKVDLETLEEQVIYTV 120 (396)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred cCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCC-CEEEEEEcCCcEEEEECCCCCcEEEEec
Confidence 456778887776543 3688899998876655543333 3348899999 7888888888999999988775544443
Q ss_pred CCcCeEE-------------------EEEcCCCCCeEEEe-----cCCCcEEEEecCCCceeeEeecCCCceeEEEEcC-
Q psy11351 78 NSGPFHA-------------------VMFNPVEARLVATA-----NSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNK- 132 (224)
Q Consensus 78 ~~~~i~~-------------------~~~~~~~~~~l~~~-----~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~- 132 (224)
+...... +.|+| +++.++.. ..+..|.+||+.+++.. .+..+...+..+.|+|
T Consensus 121 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~~~~~~~~~~~~~~sp~ 198 (396)
T 3c5m_A 121 DEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELE-VIHQDTAWLGHPIYRPF 198 (396)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETT
T ss_pred ccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEE-eeccCCcccccceECCC
Confidence 3332222 35677 56655543 35678999999887543 3345667789999999
Q ss_pred CCCeEeeeecC------CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCC-----CeEEEEeCCCC
Q psy11351 133 AGTQLLGLRRR------LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDD-----FVLYMWRVPRD 201 (224)
Q Consensus 133 ~~~~l~~~~~d------~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~v~iw~~~~~ 201 (224)
+++.|+..+.+ ..|.+||+.+++......+.. ...+..+.|+| ++++|+.++.+ +.|++||+.++
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~---~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (396)
T 3c5m_A 199 DDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAE---GESCTHEFWIP-DGSAMAYVSYFKGQTDRVIYKANPETL 274 (396)
T ss_dssp EEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCT---TEEEEEEEECT-TSSCEEEEEEETTTCCEEEEEECTTTC
T ss_pred CCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCC---CccccceEECC-CCCEEEEEecCCCCccceEEEEECCCC
Confidence 78877665543 368888987655333322111 12244578888 67766655433 45999999988
Q ss_pred CeE
Q psy11351 202 DIY 204 (224)
Q Consensus 202 ~~~ 204 (224)
+..
T Consensus 275 ~~~ 277 (396)
T 3c5m_A 275 ENE 277 (396)
T ss_dssp CEE
T ss_pred CeE
Confidence 653
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=7.1e-15 Score=107.28 Aligned_cols=194 Identities=13% Similarity=0.112 Sum_probs=135.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
+.+.+++++++.. ++.|.+||..+....... .....+.+++++|++ +++++...++.|.+|+..+............
T Consensus 73 ~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~ 150 (270)
T 1rwi_B 73 AVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLPFTGLN 150 (270)
T ss_dssp EECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECCCCSCC
T ss_pred EECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeeccccCC
Confidence 4455677666655 889999998766543322 333678999999998 6888777788999998655443322222334
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 160 (224)
....+++++ +++++++...++.|.+||................+..++++++|..+++...++.|.+|+..+..... .
T Consensus 151 ~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~ 228 (270)
T 1rwi_B 151 DPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-L 228 (270)
T ss_dssp SCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-C
T ss_pred CceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-e
Confidence 578899999 77888877778899999988664433222333678899999999777766678889999986543322 2
Q ss_pred ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 161 DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
...+ .. ....+++.+ +++++++...++.|+++++...+.
T Consensus 229 ~~~~-~~--~p~~i~~~~-~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 229 PFTG-LN--TPLAVAVDS-DRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CCCS-CS--CEEEEEECT-TCCEEEEEGGGTEEEEECCCGGGS
T ss_pred ccCC-CC--CceeEEECC-CCCEEEEECCCCEEEEEcCCCccc
Confidence 1111 11 123466777 678888888999999999887654
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=5e-14 Score=105.93 Aligned_cols=194 Identities=8% Similarity=0.048 Sum_probs=134.3
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCC----CEEEEEecCCcccceeec
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDD----GRVLLFDTRSREEATELA 76 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d----~~i~iwd~~~~~~~~~~~ 76 (224)
+.++++++++++..++.|.+||.++++..... .+...+.+++++|++ +++++...+ +.|.+||..+++....+.
T Consensus 51 ~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~ 129 (333)
T 2dg1_A 51 NFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDIIE 129 (333)
T ss_dssp EECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEEC
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEEEc
Confidence 34566787788888999999999988876655 567889999999998 777777666 689999988776442332
Q ss_pred --cCCcCeEEEEEcCCCCCeEEEecC------CCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeee-ecCCCcE
Q psy11351 77 --VNSGPFHAVMFNPVEARLVATANS------KDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGL-RRRLPPV 147 (224)
Q Consensus 77 --~~~~~i~~~~~~~~~~~~l~~~~~------dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~ 147 (224)
.+...+..++++| +++++++... .+.|..+|...++. ..+......+..++|+|+++.|+.+ +.++.|.
T Consensus 130 ~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~ 207 (333)
T 2dg1_A 130 DLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPIIQNISVANGIALSTDEKVLWVTETTANRLH 207 (333)
T ss_dssp SSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEE
T ss_pred cCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEE-EEeecCCCcccceEECCCCCEEEEEeCCCCeEE
Confidence 2345789999999 7787777653 35566677654432 2333333457889999999866554 4578899
Q ss_pred EEECCC-CCcceec------ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 148 LYNTRS-SSPVAQF------DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 148 v~d~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
+||+.+ +.....+ ...+. .....+++.+ +++++++...++.|.+||.. ++.
T Consensus 208 ~~d~~~~g~~~~~~~~~~~~~~~~~---~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~~-g~~ 265 (333)
T 2dg1_A 208 RIALEDDGVTIQPFGATIPYYFTGH---EGPDSCCIDS-DDNLYVAMYGQGRVLVFNKR-GYP 265 (333)
T ss_dssp EEEECTTSSSEEEEEEEEEEECCSS---SEEEEEEEBT-TCCEEEEEETTTEEEEECTT-SCE
T ss_pred EEEecCCCcCcccccceEEEecCCC---CCCCceEECC-CCCEEEEEcCCCEEEEECCC-CCE
Confidence 999964 3333221 11110 1233467777 68887877778899999984 443
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=3.6e-14 Score=106.81 Aligned_cols=194 Identities=8% Similarity=-0.017 Sum_probs=136.6
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccC------CeeEEEEcCCCCcEEEEec-CCCEEEEEecCCccccee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHER------PVYGLSVDPSQDAIFASAC-DDGRVLLFDTRSREEATE 74 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~~~ 74 (224)
+.+++++.+++...++.|.+||..+++....+.-.. ....+++ ..+ .++++.. .++.|.++|..+++.+..
T Consensus 90 ~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 90 HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTETDKVVDE 167 (328)
T ss_dssp EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEETTTTEEEEE
T ss_pred EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEECCCCeEEEE
Confidence 343445555555589999999999998877664333 5667887 333 5555554 489999999999887777
Q ss_pred eccCCcCeEEEEEcCCCCCeEEEecCC----------CcEEEEecCCCceeeEeec-CCCceeEEEEcCCCCeEeeeecC
Q psy11351 75 LAVNSGPFHAVMFNPVEARLVATANSK----------DGIALYDTRKPKEVLMQYG-SCESCMSIRFNKAGTQLLGLRRR 143 (224)
Q Consensus 75 ~~~~~~~i~~~~~~~~~~~~l~~~~~d----------g~v~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d 143 (224)
+... .....+.++| ++++++++..+ +.|.++|..+++....+.- .......++|+|+++.|+++..
T Consensus 168 i~~g-~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 168 LTIG-IQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp EECS-SCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-
T ss_pred EEcC-CCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-
Confidence 6543 3356888999 77877777654 7899999998865544442 2346889999999999888765
Q ss_pred CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEc----CCCCeEEEEeCCCCCeE
Q psy11351 144 LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSG----SDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 144 ~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~----~~d~~v~iw~~~~~~~~ 204 (224)
.|.+||+.+++.....-.... .-....++++|.++.++++. ..++.|.+||.. ++..
T Consensus 245 -~v~~~d~~t~~~~~~~~~~~~--~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 245 -DIWRMPVEADRVPVRPFLEFR--DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp -SEEEEETTCSSCCSSCSBCCC--SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred -EEEEEECCCCceeeeeeecCC--CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 899999988775422110100 11233477888667777887 678999999998 7654
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=2.5e-14 Score=106.01 Aligned_cols=187 Identities=9% Similarity=-0.067 Sum_probs=130.4
Q ss_pred CCCcce-EEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccC---
Q psy11351 3 SGDPIK-VLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVN--- 78 (224)
Q Consensus 3 ~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--- 78 (224)
.+..++ +++++..++.|..||..++ ......+...+.+++++|++ +++++...++.|.+||..+++........
T Consensus 35 ~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~ 112 (296)
T 3e5z_A 35 YVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGEWESIADSFEGK 112 (296)
T ss_dssp EEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCCEEEEECEETTE
T ss_pred EeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCcEEEEeeccCCC
Confidence 445566 7888888999999999987 33333567789999999998 78888777899999999877643332211
Q ss_pred -CcCeEEEEEcCCCCCeEEE----ec-------------CCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeee
Q psy11351 79 -SGPFHAVMFNPVEARLVAT----AN-------------SKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGL 140 (224)
Q Consensus 79 -~~~i~~~~~~~~~~~~l~~----~~-------------~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 140 (224)
...+..++++| +++++++ |+ ..+.|..++.. + ....+..+......++|+|+++.+++.
T Consensus 113 ~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-~~~~~~~~~~~~~gi~~s~dg~~lv~~ 189 (296)
T 3e5z_A 113 KLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-TLSAPIRDRVKPNGLAFLPSGNLLVSD 189 (296)
T ss_dssp ECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-CEEEEECCCSSEEEEEECTTSCEEEEE
T ss_pred CCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-C-CEEEeecCCCCCccEEECCCCCEEEEe
Confidence 22467899999 8888887 33 13456666654 3 344455566677899999999988766
Q ss_pred ecCCCcEEEECC-CCCc---ceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 141 RRRLPPVLYNTR-SSSP---VAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 141 ~~d~~v~v~d~~-~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
+.++.|++|++. +++. ...+ ...+.+.. +++.+ +++++++. ++.|.+|+.. ++.
T Consensus 190 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~-----i~~d~-~G~l~v~~--~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 190 TGDNATHRYCLNARGETEYQGVHFTVEPGKTDG-----LRVDA-GGLIWASA--GDGVHVLTPD-GDE 248 (296)
T ss_dssp TTTTEEEEEEECSSSCEEEEEEEECCSSSCCCS-----EEEBT-TSCEEEEE--TTEEEEECTT-SCE
T ss_pred CCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCe-----EEECC-CCCEEEEc--CCeEEEECCC-CCE
Confidence 777889999987 4443 1222 12222333 55666 67776666 7899999986 544
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.67 E-value=3e-14 Score=117.70 Aligned_cols=195 Identities=6% Similarity=-0.049 Sum_probs=132.5
Q ss_pred CCCCcceEEEEEeCCC-----cEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCE----------------
Q psy11351 2 ASGDPIKVLRVIGNDD-----HVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGR---------------- 60 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~---------------- 60 (224)
+.+++|++||.++.++ +|++||+.+++..........+..++|+|++ +.|+.++.++.
T Consensus 131 ~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (710)
T 2xdw_A 131 AFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNLHQK 209 (710)
T ss_dssp EECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCCCCE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCC-CEEEEEEECCccccccccccccCCCCE
Confidence 3567788888766543 8999999999887644222337789999999 67777766655
Q ss_pred EEEEecCCcccc--eeec--cCCcCeEEEEEcCCCCCeEEEecC-----CCcEEEEecCC------Cc-eeeEeecCCCc
Q psy11351 61 VLLFDTRSREEA--TELA--VNSGPFHAVMFNPVEARLVATANS-----KDGIALYDTRK------PK-EVLMQYGSCES 124 (224)
Q Consensus 61 i~iwd~~~~~~~--~~~~--~~~~~i~~~~~~~~~~~~l~~~~~-----dg~v~i~d~~~------~~-~~~~~~~~~~~ 124 (224)
|++|++.+++.. ..+. .+...+..+.|+| ++++|+..+. +..|.+||+.+ +. ....+..+...
T Consensus 210 v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~ 288 (710)
T 2xdw_A 210 LYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG 288 (710)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS
T ss_pred EEEEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc
Confidence 999999887632 2222 2455678999999 7777776653 56899999986 43 34555555555
Q ss_pred eeEEEEcCCCCeEeeeecCC----CcEEEECCCCCc--ceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCC--eEEE
Q psy11351 125 CMSIRFNKAGTQLLGLRRRL----PPVLYNTRSSSP--VAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDF--VLYM 195 (224)
Q Consensus 125 v~~~~~~~~~~~l~~~~~d~----~v~v~d~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~--~v~i 195 (224)
+.. .|+|+|+.|+..+.++ .|.+||+.++.. ...+ .+... ..+..+.|++ ++.++++...|+ .|.+
T Consensus 289 ~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~~~~~~~~~-~~~lv~~~~~~g~~~l~~ 363 (710)
T 2xdw_A 289 EYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK---DVLEWVACVR-SNFLVLCYLHDVKNTLQL 363 (710)
T ss_dssp CEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS---CEEEEEEEET-TTEEEEEEEETTEEEEEE
T ss_pred EEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC---CeEEEEEEEc-CCEEEEEEEECCEEEEEE
Confidence 554 5889998887765533 489999987642 2333 33321 1233466665 678888888887 4666
Q ss_pred EeCCCCCe
Q psy11351 196 WRVPRDDI 203 (224)
Q Consensus 196 w~~~~~~~ 203 (224)
|++.+++.
T Consensus 364 ~~~~~g~~ 371 (710)
T 2xdw_A 364 HDLATGAL 371 (710)
T ss_dssp EETTTCCE
T ss_pred EECCCCCE
Confidence 78766654
No 181
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.66 E-value=3e-14 Score=109.24 Aligned_cols=198 Identities=11% Similarity=0.077 Sum_probs=128.6
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEE--EcCCCCcEEEE----------------------ec
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLS--VDPSQDAIFAS----------------------AC 56 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~--~~~~~~~~l~s----------------------~~ 56 (224)
+.+.+++.|+.++.++.|++||+.+++..... .+...+.... ++|++ .+++. ..
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (388)
T 3pe7_A 87 FLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTK 165 (388)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccC
Confidence 34677889999999999999999999877666 3444443343 48888 66653 33
Q ss_pred CCCEEEEEecCCcccceeeccCCcCeEEEEEcCCCCCeEEEecC------CCcEEEEecCCCceeeEeecCC--CceeEE
Q psy11351 57 DDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANS------KDGIALYDTRKPKEVLMQYGSC--ESCMSI 128 (224)
Q Consensus 57 ~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~v~i~d~~~~~~~~~~~~~~--~~v~~~ 128 (224)
.+..|.+||+.+++. ..+..+...+..+.|+|.+++.++.... ...|.++|+...+ ...+..+. ..+..+
T Consensus 166 ~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~ 243 (388)
T 3pe7_A 166 PCCRLMRVDLKTGES-TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHE 243 (388)
T ss_dssp CCEEEEEEETTTCCE-EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEE
T ss_pred CcceEEEEECCCCce-EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccc
Confidence 557899999998864 4444556778999999933455554443 2368888876543 34444443 357788
Q ss_pred EEcCCCCeEeeeec-CC----CcEEEECCCCCcceecccCCcccc-eeeeEEEEeCCCCeEEEEc---------CCCCeE
Q psy11351 129 RFNKAGTQLLGLRR-RL----PPVLYNTRSSSPVAQFDHEGYYNS-CTMKSCCFAGTQDEYVVSG---------SDDFVL 193 (224)
Q Consensus 129 ~~~~~~~~l~~~~~-d~----~v~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~s~---------~~d~~v 193 (224)
.|+|+|+.|+..+. ++ .|++||+.+++........+.... .......|+| +++.|+.. ..+..|
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~i 322 (388)
T 3pe7_A 244 FWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVG-DGSDAPVDVQDDSGYKIENDPFL 322 (388)
T ss_dssp EECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEE-EECCC------------CCCCEE
T ss_pred eECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEcc-CCCcceeEeeeccccccCCCCEE
Confidence 99999998866443 22 299999998875333222221000 0011125666 67766543 556799
Q ss_pred EEEeCCCCCe
Q psy11351 194 YMWRVPRDDI 203 (224)
Q Consensus 194 ~iw~~~~~~~ 203 (224)
++||+.+++.
T Consensus 323 ~~~d~~~~~~ 332 (388)
T 3pe7_A 323 YVFNMKNGTQ 332 (388)
T ss_dssp EEEETTTTEE
T ss_pred EEEeccCCce
Confidence 9999998765
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.65 E-value=2.8e-14 Score=107.35 Aligned_cols=187 Identities=11% Similarity=0.012 Sum_probs=137.1
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCC-----c
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNS-----G 80 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-----~ 80 (224)
.++++++...++.|.+||.++++.+..+........+++++++ +++++...++.|.+||..+++....+.... .
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~ 131 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESG 131 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCC
Confidence 3556677777899999999999998888666788999999987 676766588999999999988766665332 1
Q ss_pred CeEEEEEcCCCCCeEEEec-CCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecC----------CCcEEE
Q psy11351 81 PFHAVMFNPVEARLVATAN-SKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRR----------LPPVLY 149 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~v~v~ 149 (224)
....+++ . ++.++++.. .++.|.++|+.+++....+.. ......+.++|+|++++++..+ +.|.++
T Consensus 132 ~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~i 208 (328)
T 3dsm_A 132 STEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRI 208 (328)
T ss_dssp BCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEE
T ss_pred CcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEE
Confidence 3456666 3 556666654 488999999998876655543 3445788999999977776654 689999
Q ss_pred ECCCCCcceecccC-CcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 150 NTRSSSPVAQFDHE-GYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 150 d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
|..+++....+... +. ....++++| +++.|..+.. .|.+||..+++.
T Consensus 209 d~~t~~v~~~~~~~~g~----~p~~la~~~-d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 209 DAETFTVEKQFKFKLGD----WPSEVQLNG-TRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp ETTTTEEEEEEECCTTC----CCEEEEECT-TSCEEEEESS--SEEEEETTCSSC
T ss_pred ECCCCeEEEEEecCCCC----CceeEEEec-CCCEEEEEcc--EEEEEECCCCce
Confidence 99988876665321 11 123477777 5666665543 899999988775
No 183
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.65 E-value=2.5e-14 Score=104.37 Aligned_cols=192 Identities=10% Similarity=0.051 Sum_probs=129.6
Q ss_pred CCCCcceEEE-EEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec-cC
Q psy11351 2 ASGDPIKVLR-VIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA-VN 78 (224)
Q Consensus 2 a~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~ 78 (224)
+.++.+++++ +...++.|.+||..+....... .+...+.++++++++ +++++.. ++.|.+||...... ..+. ..
T Consensus 30 ~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~ 106 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNNQ-TVLPFDG 106 (270)
T ss_dssp EECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECTTCSCC-EECCCCS
T ss_pred EECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeCCCceE-eeeecCC
Confidence 4556677676 5467889999998765543322 344578899999998 6666666 88999999876543 2232 22
Q ss_pred CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcce
Q psy11351 79 SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVA 158 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~ 158 (224)
......+++++ +++++++...++.|.+|+..+.............+..++++++|+.+++...++.|.+||..+.....
T Consensus 107 ~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~ 185 (270)
T 1rwi_B 107 LNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV 185 (270)
T ss_dssp CSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE
T ss_pred cCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe
Confidence 35689999999 77888887778899999866543322222233467889999999877766667889999987655433
Q ss_pred ec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 159 QF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 159 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.. ..... ...+++.+ ++.++++...++.|.+|+......
T Consensus 186 ~~~~~~~~-----p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 186 LPFTDITA-----PWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CCCSSCCS-----EEEEEECT-TCCEEEEETTTSCEEEECTTCSCC
T ss_pred ecccCCCC-----ceEEEECC-CCCEEEEECCCCcEEEEcCCCCcc
Confidence 22 11122 23466666 578888877889999999876544
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.63 E-value=6.4e-15 Score=113.07 Aligned_cols=191 Identities=12% Similarity=0.052 Sum_probs=127.7
Q ss_pred CCCcceEEEEEeCCCcEEEEeCCCCceeeEEe-ccCCeeE-------------------EEEcCCCCcEEEEe-----cC
Q psy11351 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFYL-HERPVYG-------------------LSVDPSQDAIFASA-----CD 57 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~-------------------~~~~~~~~~~l~s~-----~~ 57 (224)
.++++++|+.++.++.|++||+.+++...... +...... +.|+|++ +.++.+ ..
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 88 ISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT-SWEKFAEFYHTNP 166 (396)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC-SHHHHHHHHHTCC
T ss_pred ECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCC-cceeeeeeccCCC
Confidence 36778899999999999999999988766553 3332222 3467776 444433 46
Q ss_pred CCEEEEEecCCcccceeeccCCcCeEEEEEcCCCCCeEEEecCC------CcEEEEecCCCceeeEeecC--CCceeEEE
Q psy11351 58 DGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSK------DGIALYDTRKPKEVLMQYGS--CESCMSIR 129 (224)
Q Consensus 58 d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------g~v~i~d~~~~~~~~~~~~~--~~~v~~~~ 129 (224)
+..|.+||+.+++..... .+...+..+.|+|.++..++..+.+ ..|.+||+..++ ...+..+ ...+..++
T Consensus 167 ~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-VRKIKEHAEGESCTHEF 244 (396)
T ss_dssp CEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC-CEESSCCCTTEEEEEEE
T ss_pred cceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc-eeEeeccCCCccccceE
Confidence 779999999887754433 4566789999999445545444333 368888887553 2333332 23578899
Q ss_pred EcCCCCeEeeeecC-----CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcC----------------
Q psy11351 130 FNKAGTQLLGLRRR-----LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS---------------- 188 (224)
Q Consensus 130 ~~~~~~~l~~~~~d-----~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~---------------- 188 (224)
|+|+|++|+..+.+ +.|++||+.+++........+ .. ..|+|.++++++.++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~------~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP------CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS------EE-EEEECSSSSEEEEEECCC----------CCC
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC------CC-CCccCCCCceEEEecCCcceeeccccccccC
Confidence 99999988776544 339999998876543322221 11 678873466776543
Q ss_pred CCCeEEEEeCCCCCe
Q psy11351 189 DDFVLYMWRVPRDDI 203 (224)
Q Consensus 189 ~d~~v~iw~~~~~~~ 203 (224)
.+..|++||+.+++.
T Consensus 318 ~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 318 NDPFLYVLNTKAKSA 332 (396)
T ss_dssp CCCEEEEEETTTTBC
T ss_pred CCCcEEEEecccCce
Confidence 347899999988764
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.62 E-value=2.9e-14 Score=107.24 Aligned_cols=187 Identities=10% Similarity=0.046 Sum_probs=127.2
Q ss_pred CCCcceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcC
Q psy11351 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP 81 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 81 (224)
.+..+..++..+.++.++.| .++....+ .+...+.+++|+|++ ++++++..++.|.+||..+++.......+...
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 88 (333)
T 2dg1_A 13 YSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIKRPFVSHKAN 88 (333)
T ss_dssp SCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECSSSS
T ss_pred ecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCC
Confidence 34444455555678888888 33444433 566778999999998 78888888999999999887754444345678
Q ss_pred eEEEEEcCCCCCeEEEecCC----CcEEEEecCCCceeeEee--cCCCceeEEEEcCCCCeEeeeec------CCCcEEE
Q psy11351 82 FHAVMFNPVEARLVATANSK----DGIALYDTRKPKEVLMQY--GSCESCMSIRFNKAGTQLLGLRR------RLPPVLY 149 (224)
Q Consensus 82 i~~~~~~~~~~~~l~~~~~d----g~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------d~~v~v~ 149 (224)
+.+++++| +++++++...+ +.|.+||..+......+. .....+..++++|+|+.+++... .+.|..+
T Consensus 89 ~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~ 167 (333)
T 2dg1_A 89 PAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYV 167 (333)
T ss_dssp EEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEE
T ss_pred cceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEE
Confidence 99999999 77888777666 689999988765432222 24457899999999987776543 2445566
Q ss_pred ECCCCCcceecccCCcccceeeeEEEEeCCCCe-EEEEcCCCCeEEEEeCCC
Q psy11351 150 NTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE-YVVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~v~iw~~~~ 200 (224)
|..+++.......... ...++|+| +++ ++++.+.++.|.+|++.+
T Consensus 168 ~~~~~~~~~~~~~~~~-----~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 168 SPDFRTVTPIIQNISV-----ANGIALST-DEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CTTSCCEEEEEEEESS-----EEEEEECT-TSSEEEEEEGGGTEEEEEEECT
T ss_pred eCCCCEEEEeecCCCc-----ccceEECC-CCCEEEEEeCCCCeEEEEEecC
Confidence 6554443222221111 23467777 566 456666788999999964
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.61 E-value=1.7e-12 Score=104.16 Aligned_cols=200 Identities=12% Similarity=0.039 Sum_probs=139.9
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCC--CCceeeEEeccCCeeEEEEc----CCCCcEEEEecCCCEEEEEecCCcccceee
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMA--SGDPIDFYLHERPVYGLSVD----PSQDAIFASACDDGRVLLFDTRSREEATEL 75 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~~~~~----~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 75 (224)
+++.+++++++++.|+.|.+||+. +++.+..+........++|+ |+|..++++...++++.++|..+.+.+..+
T Consensus 203 ~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i 282 (567)
T 1qks_A 203 RLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ 282 (567)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 457788999999999999999996 77777766555567899999 698444455556699999999998877665
Q ss_pred cc----------CCc-CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeE-eecCCCceeEEEEcCCCCeEeeee-c
Q psy11351 76 AV----------NSG-PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLM-QYGSCESCMSIRFNKAGTQLLGLR-R 142 (224)
Q Consensus 76 ~~----------~~~-~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~ 142 (224)
.. |.. .+..+..++.+..+++....+|.|.++|....+.+.. ..........+.|+|+|++++++. .
T Consensus 283 ~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~ 362 (567)
T 1qks_A 283 STRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA 362 (567)
T ss_dssp ECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG
T ss_pred eccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC
Confidence 42 112 6788888885566777777789999999986543322 123445677899999999987765 5
Q ss_pred CCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcC-CCCeEEEEeCCCC
Q psy11351 143 RLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS-DDFVLYMWRVPRD 201 (224)
Q Consensus 143 d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~v~iw~~~~~ 201 (224)
++.|.++|+.+++.+..+.-.+..........-++|..+..++++. .++.|.++|..++
T Consensus 363 sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 363 RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred CCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCC
Confidence 7889999999998766653201111100000113553355556654 4689999999873
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=1.3e-13 Score=104.14 Aligned_cols=180 Identities=10% Similarity=0.113 Sum_probs=119.8
Q ss_pred CCCcceEEEEEeCC---C--cEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecC--------------------
Q psy11351 3 SGDPIKVLRVIGND---D--HVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACD-------------------- 57 (224)
Q Consensus 3 ~~~~~~~l~~~~~d---g--~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-------------------- 57 (224)
.+++|++|+..+.+ + .|.+||+.+++......+.. +..+.|+|++ +.|+.++.
T Consensus 66 ~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~g 143 (347)
T 2gop_A 66 ISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVPAWFDD 143 (347)
T ss_dssp ECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTS-SEEEEEEECCCC---------CCCC---
T ss_pred ECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCC-CEEEEEEccCCCcCCcEEEcccceeecC
Confidence 46778888877654 2 48888998888777665555 9999999999 66666542
Q ss_pred -------CCEEEEEecCCcccceeeccCCcCeEEEEEcCCCCCeEEEecCCC-------cEEEEecCCCceeeEeecCCC
Q psy11351 58 -------DGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKD-------GIALYDTRKPKEVLMQYGSCE 123 (224)
Q Consensus 58 -------d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-------~v~i~d~~~~~~~~~~~~~~~ 123 (224)
...|.+||+.+++.+..+.. . .+..+.|+| ++ +++++..++ ...+|.+.++ ....+..+ .
T Consensus 144 ~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d~~-~~~~l~~~-~ 217 (347)
T 2gop_A 144 LGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWEDG-KEEKMFEK-V 217 (347)
T ss_dssp ------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEETT-EEEEEEEE-E
T ss_pred cccccCccceEEEEECCCCeEEeeecC-C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeCCC-ceEEeccC-c
Confidence 36799999988876355544 3 788999999 77 777775542 3455544444 34444444 4
Q ss_pred ceeEEEEcCCCCeEeeeecCC--------CcEEEECCCCCcceecc-cCCcccceeeeE-EEEeCCCCeEEEEcCCCCeE
Q psy11351 124 SCMSIRFNKAGTQLLGLRRRL--------PPVLYNTRSSSPVAQFD-HEGYYNSCTMKS-CCFAGTQDEYVVSGSDDFVL 193 (224)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~d~--------~v~v~d~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~l~s~~~d~~v 193 (224)
.+..+ +|+|++|+..+.+. .|++|| +++...... +... +.. +.|+ ++ ++++++.++.+
T Consensus 218 ~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~-----~~~~~~~s--dg-~~~~~~~~~~~ 285 (347)
T 2gop_A 218 SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRG-----VGQAKIKD--GK-VYFTLFEEGSV 285 (347)
T ss_dssp SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSE-----EEEEEEET--TE-EEEEEEETTEE
T ss_pred ceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcc-----cCCccEEc--Cc-EEEEEecCCcE
Confidence 44444 99999988776443 466777 444333222 2222 222 5676 46 88888999999
Q ss_pred EEEeCCCCCe
Q psy11351 194 YMWRVPRDDI 203 (224)
Q Consensus 194 ~iw~~~~~~~ 203 (224)
++| +.+++.
T Consensus 286 ~l~-~~~g~~ 294 (347)
T 2gop_A 286 NLY-IWDGEI 294 (347)
T ss_dssp EEE-EESSSE
T ss_pred EEE-EcCCce
Confidence 999 875543
No 188
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.59 E-value=3.4e-16 Score=119.69 Aligned_cols=184 Identities=12% Similarity=0.077 Sum_probs=107.9
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc-CeE-
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG-PFH- 83 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~i~- 83 (224)
.+..+++++.||.|+.||..+++.+..+.. +.+.+..+..++ ..+++++.|+.|+.||.++++.+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCC-CEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 456889999999999999999999887754 566666666666 6788888999999999999887665543211 110
Q ss_pred EEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecccC
Q psy11351 84 AVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHE 163 (224)
Q Consensus 84 ~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~ 163 (224)
+..+. .+..+++++.++.+..||.++++....+..+. ...++|++..+++++.++.|+.||.++++.+..+...
T Consensus 86 sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 86 SPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp CSCC-------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred CceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence 00111 23467778889999999999997766554432 2356678889999999999999999999887766321
Q ss_pred CcccceeeeEEEEeCCC---CeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 164 GYYNSCTMKSCCFAGTQ---DEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 164 ~~~~~~~~~~~~~~~~~---~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
.. .. ..+.+ + +..+++++.||.|+.||..+|+..
T Consensus 160 ~~-~~-----~~~~~-~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 160 DY-AA-----SLPED-DVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp EE-CC-----BCCCC-CTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred cc-cC-----ccccC-CccccceEEEECCCCEEEEEECCCCcEE
Confidence 11 11 11211 1 145667788999999999999873
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.59 E-value=3.5e-12 Score=102.35 Aligned_cols=189 Identities=10% Similarity=0.060 Sum_probs=138.9
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecC--CcccceeeccCCcCeEE
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTR--SREEATELAVNSGPFHA 84 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~i~~ 84 (224)
+.++++...+++|.++|..+++.+..+.....+..+.|+|++ +++++++.|+.|.+||+. +++.+..+..... ...
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ 244 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARS 244 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-Cce
Confidence 456777788999999999999999888666678899999999 788888999999999995 7777777765333 578
Q ss_pred EEEc----CCCCCeEEEec-CCCcEEEEecCCCceeeEeecC-----------CCceeEEEEcCCCCeEee-eecCCCcE
Q psy11351 85 VMFN----PVEARLVATAN-SKDGIALYDTRKPKEVLMQYGS-----------CESCMSIRFNKAGTQLLG-LRRRLPPV 147 (224)
Q Consensus 85 ~~~~----~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~-~~~d~~v~ 147 (224)
++|+ | ++++++++. .++.+.++|..+.+.+..+.-. ...+..+..++++..++. ...+|.|.
T Consensus 245 ia~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 245 IETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eEEccccCC-CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 9999 6 666666554 5689999999988776655421 225778888988665444 45568899
Q ss_pred EEECCCCCcceec--ccCCcccceeeeEEEEeCCCCeEEE-EcCCCCeEEEEeCCCCCeE
Q psy11351 148 LYNTRSSSPVAQF--DHEGYYNSCTMKSCCFAGTQDEYVV-SGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 148 v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~v~iw~~~~~~~~ 204 (224)
++|....+.+... ..... .....|+| ++++++ +...++.|.++|+.+++..
T Consensus 324 ~vd~~~~~~~~v~~i~~~~~-----~~d~~~~p-dgr~~~va~~~sn~V~ViD~~t~kl~ 377 (567)
T 1qks_A 324 LVDYTDLNNLKTTEISAERF-----LHDGGLDG-SHRYFITAANARNKLVVIDTKEGKLV 377 (567)
T ss_dssp EEETTCSSEEEEEEEECCSS-----EEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred EEecCCCccceeeeeecccc-----ccCceECC-CCCEEEEEeCCCCeEEEEECCCCcEE
Confidence 9998765432222 11111 22466777 577654 4556789999999998764
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.58 E-value=2.4e-13 Score=112.13 Aligned_cols=189 Identities=10% Similarity=0.027 Sum_probs=122.4
Q ss_pred CCcceEEEEEeCCC---c--EEEEeCCCCceeeEE-------eccCCeeEEEEcCCCCcEEE-----EecCCCEEEEEec
Q psy11351 4 GDPIKVLRVIGNDD---H--VISHDMASGDPIDFY-------LHERPVYGLSVDPSQDAIFA-----SACDDGRVLLFDT 66 (224)
Q Consensus 4 ~~~~~~l~~~~~dg---~--i~iwd~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~-----s~~~d~~i~iwd~ 66 (224)
...|++++....++ . +.+.+...++....+ +|...+..++|+|+| ++|+ .|+.+..|++||+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEET
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEEC
Confidence 34566666665543 2 444455455544443 244478999999999 7777 5566689999999
Q ss_pred CCcccc-eeeccCCcCeEEEEEcCCCCCeEEEecCCCc-------------EEEEecCCCcee--eEee--cCCCceeEE
Q psy11351 67 RSREEA-TELAVNSGPFHAVMFNPVEARLVATANSKDG-------------IALYDTRKPKEV--LMQY--GSCESCMSI 128 (224)
Q Consensus 67 ~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~-------------v~i~d~~~~~~~--~~~~--~~~~~v~~~ 128 (224)
.+++.+ ..... ......++|+| +++.|+.++.+.. |++|++.+++.. ..+. .+...+..+
T Consensus 155 ~tg~~~~~~~~~-~~~~~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~ 232 (695)
T 2bkl_A 155 DSGEWSKVDVIE-GGKYATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS 232 (695)
T ss_dssp TTCCBCSSCCBS-CCTTCCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE
T ss_pred CCCCCcCCcccC-cccccceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE
Confidence 998864 21111 11126899999 8888888877665 999999887531 2222 345678899
Q ss_pred EEcCCCCeEeeeecCC----CcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcC---CCCeEEEEeCCCC
Q psy11351 129 RFNKAGTQLLGLRRRL----PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS---DDFVLYMWRVPRD 201 (224)
Q Consensus 129 ~~~~~~~~l~~~~~d~----~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~---~d~~v~iw~~~~~ 201 (224)
.|+|||++|+..+.++ .|++++..+++......+...... ..+ + ++.+++... .++.|.+||+.++
T Consensus 233 ~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~-~-~g~l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 233 DLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYE-----VHA-W-KDRFYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp EECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEE-----EEE-E-TTEEEEEECTTCTTCEEEEEBTTBC
T ss_pred EECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEE-----EEe-c-CCcEEEEECCCCCCCEEEEEeCCCC
Confidence 9999999998887665 577777655544333333332221 223 3 455555444 3689999999876
Q ss_pred C
Q psy11351 202 D 202 (224)
Q Consensus 202 ~ 202 (224)
+
T Consensus 306 ~ 306 (695)
T 2bkl_A 306 A 306 (695)
T ss_dssp S
T ss_pred C
Confidence 5
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=6.4e-13 Score=98.37 Aligned_cols=189 Identities=7% Similarity=0.045 Sum_probs=127.0
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEe-----ccCCeeEEEEcCCCCcEEEE----ec-------------CCC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYL-----HERPVYGLSVDPSQDAIFAS----AC-------------DDG 59 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s----~~-------------~d~ 59 (224)
+.++.++++++...++.|.+||.++++...... ....+.+++++|+| +++++ |. ..+
T Consensus 75 ~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 75 CLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp EECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred eECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCc
Confidence 456678887777777899999998887655441 12356789999998 78876 33 134
Q ss_pred EEEEEecCCcccceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecC-CCce---eeEeecCCCceeEEEEcCCCC
Q psy11351 60 RVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTR-KPKE---VLMQYGSCESCMSIRFNKAGT 135 (224)
Q Consensus 60 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~-~~~~---~~~~~~~~~~v~~~~~~~~~~ 135 (224)
.|..++.. ++ ...+..+......++|+| +++++++.+.++.|.+||+. +++. ...+..+...+..++++++|+
T Consensus 154 ~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~ 230 (296)
T 3e5z_A 154 WVFRLAPD-GT-LSAPIRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL 230 (296)
T ss_dssp EEEEECTT-SC-EEEEECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC
T ss_pred EEEEECCC-CC-EEEeecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC
Confidence 66666654 33 344445556678999999 77777888888999999997 3332 122222445667899999998
Q ss_pred eEeeeecCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 136 QLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 136 ~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
++++. ++.|.+||.. ++.+..+.....+.. ++|..++++.|++++.+ .+.-++..+.+.
T Consensus 231 l~v~~--~~~v~~~~~~-g~~~~~~~~~~~~~~-----~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 231 IWASA--GDGVHVLTPD-GDELGRVLTPQTTSN-----LCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp EEEEE--TTEEEEECTT-SCEEEEEECSSCCCE-----EEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred EEEEc--CCeEEEECCC-CCEEEEEECCCCcee-----EEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 66665 7779999986 666666632222444 55532267777776665 455666666554
No 192
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.57 E-value=2.4e-13 Score=102.73 Aligned_cols=161 Identities=9% Similarity=0.105 Sum_probs=106.9
Q ss_pred CCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCC---C--EEEEEecCCcccceeeccCCcCeEEEEEcCC
Q psy11351 16 DDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDD---G--RVLLFDTRSREEATELAVNSGPFHAVMFNPV 90 (224)
Q Consensus 16 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---~--~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 90 (224)
++.|.+||+.+++.... ..+..+.|+|+| +.|+.++.+ + .|.+||+.+++....... .. +..++|+|
T Consensus 42 ~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wsp- 113 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----ENATMPRISPDG-KKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNE- 113 (347)
T ss_dssp EEEEEEEETTTCCEEEE----ESCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECT-
T ss_pred cceEEEEeCCCCceEEc----ccCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECC-
Confidence 66899999998876544 568899999999 677766543 3 478888887765444433 34 99999999
Q ss_pred CCCeEEEecC---------------------------CCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecC
Q psy11351 91 EARLVATANS---------------------------KDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRR 143 (224)
Q Consensus 91 ~~~~l~~~~~---------------------------dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 143 (224)
+++.|+.++. ...|.+||+.+++....+.. . .+..+.|+|+| .++++..+
T Consensus 114 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 114 DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecc
Confidence 7777776653 25689999988765344444 3 78899999999 77776544
Q ss_pred C-------CcEEEECCCCCcceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCC--------CeEEEEe
Q psy11351 144 L-------PPVLYNTRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDD--------FVLYMWR 197 (224)
Q Consensus 144 ~-------~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d--------~~v~iw~ 197 (224)
. ...+|.+.+++. ..+ .+ ..+ ..++| +++.|+.++.+ ..|.+||
T Consensus 191 ~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~-------~~~sp-dg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 191 EIIPQYFKFWDIYIWEDGKE-EKMFEK-VSF-------YAVDS-DGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp CSSCCSSCCEEEEEEETTEE-EEEEEE-ESE-------EEEEE-CSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred cccccccccccEEEeCCCce-EEeccC-cce-------eeECC-CCCEEEEEEccccCCccccceEEEEC
Confidence 2 335554444433 333 22 111 11266 67777665533 4788888
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.56 E-value=1.8e-12 Score=95.19 Aligned_cols=176 Identities=10% Similarity=0.006 Sum_probs=128.4
Q ss_pred CCCcceEEEEEeCCCcEEEEeCCCCceeeEEec--cCCeeEEEEcCCCCcEEEEecC-CCEEEEEecCCcccceeecc--
Q psy11351 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFYLH--ERPVYGLSVDPSQDAIFASACD-DGRVLLFDTRSREEATELAV-- 77 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~-- 77 (224)
...+|++++ +.++.|..||. +++.+..+.. ...+.++.+.|+| +++++.+. ++.+..+|. +++.+..+..
T Consensus 44 ~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG-~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~ 118 (276)
T 3no2_A 44 ATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDG-NALVAWCGHPSTILEVNM-KGEVLSKTEFET 118 (276)
T ss_dssp ECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTS-CEEEEEESTTEEEEEECT-TSCEEEEEEECC
T ss_pred ECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCC-CEEEEecCCCCEEEEEeC-CCCEEEEEeccC
Confidence 456778888 45778999999 7888877732 3578899999999 78888776 788888885 6666555431
Q ss_pred ----CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCC
Q psy11351 78 ----NSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 78 ----~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~ 153 (224)
+......+++.+ +++++++...++.|..||.. ++.+..+... ..+.++...++|+.++++..++.|..+|..+
T Consensus 119 ~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~t 195 (276)
T 3no2_A 119 GIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLES 195 (276)
T ss_dssp SCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTT
T ss_pred CCCcccccccCceECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcC
Confidence 112345567788 88999999999999999988 8777666543 4566788899999999988888899999999
Q ss_pred CCcceecccC--CcccceeeeEEEEeCCCCeEEEEc
Q psy11351 154 SSPVAQFDHE--GYYNSCTMKSCCFAGTQDEYVVSG 187 (224)
Q Consensus 154 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~s~ 187 (224)
++.+.++... ..........+...+ ++.++++.
T Consensus 196 G~~~w~~~~~~~~~~~l~~~~~~~~~~-~G~i~v~~ 230 (276)
T 3no2_A 196 NRIVRRVNANDIEGVQLFFVAQLFPLQ-NGGLYICN 230 (276)
T ss_dssp CCEEEEEEGGGSBSCCCSEEEEEEECT-TSCEEEEE
T ss_pred CcEEEEecCCCCCCccccccccceEcC-CCCEEEEe
Confidence 9998888321 111111233445555 67777776
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.55 E-value=5.5e-12 Score=93.04 Aligned_cols=190 Identities=8% Similarity=-0.046 Sum_probs=132.2
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceee--cc
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATEL--AV 77 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--~~ 77 (224)
+.+..|+++++...++.|.+||.. ++..... .....+.++++.+++ .++++...++.|..||.. ++ ...+ ..
T Consensus 21 ~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~ 96 (299)
T 2z2n_A 21 TVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRITKK-GI-IKEYTLPN 96 (299)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SC-EEEEECSS
T ss_pred EECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEECCC-Cc-EEEEeCCC
Confidence 446677777776668899999998 6554333 245679999999998 788877778899999976 33 2222 22
Q ss_pred CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeE-eecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCc
Q psy11351 78 NSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLM-QYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSP 156 (224)
Q Consensus 78 ~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~ 156 (224)
....+..+++++ ++.++++...++.|..||. +++.... .......+..++++++|+.+++...++.|..||. +++.
T Consensus 97 ~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 97 PDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI 173 (299)
T ss_dssp TTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred cCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE
Confidence 345789999999 7888888777889999998 4433222 2234567899999999987777666778999998 5554
Q ss_pred ceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 157 VAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
..... ..... ....+++.+ ++.++++...++.|..||. +++.
T Consensus 174 ~~~~~-~~~~~--~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~ 215 (299)
T 2z2n_A 174 TEFKI-PTPAS--GPVGITKGN-DDALWFVEIIGNKIGRITT-SGEI 215 (299)
T ss_dssp EEEEC-SSTTC--CEEEEEECT-TSSEEEEETTTTEEEEECT-TCCE
T ss_pred EEeeC-CCCCC--cceeEEECC-CCCEEEEccCCceEEEECC-CCcE
Confidence 33211 11111 123466666 5777777777889999998 6654
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.54 E-value=1.9e-13 Score=112.67 Aligned_cols=188 Identities=7% Similarity=-0.041 Sum_probs=122.9
Q ss_pred CCCCcceEEE-----EEeCCCcEEEEeCCCCcee-eEEeccCCeeEEEEcCCCCcEEEEecCCCE-------------EE
Q psy11351 2 ASGDPIKVLR-----VIGNDDHVISHDMASGDPI-DFYLHERPVYGLSVDPSQDAIFASACDDGR-------------VL 62 (224)
Q Consensus 2 a~~~~~~~l~-----~~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~-------------i~ 62 (224)
+.+++|++|| .|+.+.+|++||+.+++.+ ...........++|+|+| +.|+.++.|.. |+
T Consensus 127 ~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg-~~l~~~~~d~~~~~~~~~~~~~~~v~ 205 (695)
T 2bkl_A 127 AVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDS-KGFYYEWLPTDPSIKVDERPGYTTIR 205 (695)
T ss_dssp EECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTS-SEEEEEECCCCTTSCGGGGGGGCEEE
T ss_pred EECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCC-CEEEEEEecCCCCCccccCCCCCEEE
Confidence 3567788888 4444568999999999875 211111112689999999 78888877765 99
Q ss_pred EEecCCcccc----eeeccCCcCeEEEEEcCCCCCeEEEecCCC----cEEEEecCCCceeeEeecCCCceeEEEEcCCC
Q psy11351 63 LFDTRSREEA----TELAVNSGPFHAVMFNPVEARLVATANSKD----GIALYDTRKPKEVLMQYGSCESCMSIRFNKAG 134 (224)
Q Consensus 63 iwd~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg----~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 134 (224)
+|++.+++.. .....+...+..+.|+| ++++++.++.++ .|.++|..++ ....+..+...+....+ ++|
T Consensus 206 ~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~-~~~~l~~~~~~~~~~~~-~~g 282 (695)
T 2bkl_A 206 YHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEK-DFRLLVKGVGAKYEVHA-WKD 282 (695)
T ss_dssp EEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCS-SCEEEEECSSCCEEEEE-ETT
T ss_pred EEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCC-ceEEeecCCCceEEEEe-cCC
Confidence 9999887632 22233456788999999 777777666555 5777766544 34455555556666666 566
Q ss_pred CeEeeeec----CCCcEEEECCCCCc---ceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCC
Q psy11351 135 TQLLGLRR----RLPPVLYNTRSSSP---VAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 135 ~~l~~~~~----d~~v~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~ 199 (224)
. ++..+. ++.|.+||+.++.. ...+.+... ..+..+.|+ ++.++++...|+..++|.+.
T Consensus 283 ~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 283 R-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS---ASLLSVSIV--GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp E-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS---CEEEEEEEE--TTEEEEEEEETTEEEEEEEE
T ss_pred c-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC---CeEEEEEEE--CCEEEEEEEECCEEEEEEEe
Confidence 6 544443 46799999987653 222233211 112334555 57888999999988887654
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.54 E-value=8e-12 Score=95.54 Aligned_cols=191 Identities=12% Similarity=-0.028 Sum_probs=123.5
Q ss_pred CCCCCcceEEEEEe----------CCCcEEEEeCCCCceeeEEec--------cCCeeEEEEcCCCCcEEEEecC--CCE
Q psy11351 1 MASGDPIKVLRVIG----------NDDHVISHDMASGDPIDFYLH--------ERPVYGLSVDPSQDAIFASACD--DGR 60 (224)
Q Consensus 1 ~a~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~l~s~~~--d~~ 60 (224)
|+++.++++++.+. .++.|.+||..+.+.+..+.- ......+.|+|+| ++|+.+.. ++.
T Consensus 71 i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG-~~l~v~n~~~~~~ 149 (373)
T 2mad_H 71 PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNN-ADLLFFQFAAGPA 149 (373)
T ss_pred eEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCC-CEEEEEecCCCCe
Confidence 45677888888775 367899999998887766522 1345689999999 67776653 588
Q ss_pred EEEEecCCccccee-eccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCcee------------------------
Q psy11351 61 VLLFDTRSREEATE-LAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEV------------------------ 115 (224)
Q Consensus 61 i~iwd~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~------------------------ 115 (224)
|.++| .+++.+.. +... . ++.+.|.+.+.+++.+.||.+.++|. +++..
T Consensus 150 v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 99999 98887766 5321 1 12223323333444444555444444 32211
Q ss_pred --------------------------eEeec----------CCCceeEEEEcCCCCeEeeeec----------CCCcEEE
Q psy11351 116 --------------------------LMQYG----------SCESCMSIRFNKAGTQLLGLRR----------RLPPVLY 149 (224)
Q Consensus 116 --------------------------~~~~~----------~~~~v~~~~~~~~~~~l~~~~~----------d~~v~v~ 149 (224)
..+.- .......+.++|+++.+++... ++.|.++
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI 303 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence 00000 0111233778899888777643 3579999
Q ss_pred ECCCCCcceecccCCcccceeeeEEEEeCCCCe-EEEEcC-CCCeEEEEeCCCCCeE
Q psy11351 150 NTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE-YVVSGS-DDFVLYMWRVPRDDIY 204 (224)
Q Consensus 150 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~-~d~~v~iw~~~~~~~~ 204 (224)
|+.+++.+..+...+.... +.|+| +++ +++++. .++.|.++|+.+++..
T Consensus 304 D~~t~~vv~~i~~g~~p~~-----i~~s~-Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 304 TGLVGQTSSQISLGHDVDA-----ISVAQ-DGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred ECCCCEEEEEEECCCCcCe-----EEECC-CCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 9999998888854444444 56666 677 677766 5899999999999876
No 197
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.52 E-value=2.9e-12 Score=99.16 Aligned_cols=197 Identities=11% Similarity=0.070 Sum_probs=129.6
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCC--EEEEEecCCcccceee---
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDG--RVLLFDTRSREEATEL--- 75 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~--- 75 (224)
||++..++++++...++.|++||.++++............ ++|+|++ +.|+++..++ .|.+++...+.....+
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~ 213 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYMKASGWAPTRIGQL 213 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTS-SEEEEEBSSTTCEEEEEEGGGTTCEEEEEEC
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCC-CcEEEEecCCCceEEEEEcCCCceeEEeeec
Confidence 3566778878887778999999999887766654334444 9999998 6777777655 8989988765543333
Q ss_pred -ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeE----eecCCCce-e-EEEEcCC-CCeEeeeecCCCcE
Q psy11351 76 -AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLM----QYGSCESC-M-SIRFNKA-GTQLLGLRRRLPPV 147 (224)
Q Consensus 76 -~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~----~~~~~~~v-~-~~~~~~~-~~~l~~~~~d~~v~ 147 (224)
........+++++|.++. |+.+..++.|..||..+...... ..+..... . .++|+|+ +.++++-..++.|+
T Consensus 214 ~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~ 292 (409)
T 3hrp_A 214 GSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVY 292 (409)
T ss_dssp CTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred cchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEE
Confidence 213456788999994444 44466788999999987653222 11222222 3 8999996 44555555677889
Q ss_pred EEECCCCCcceec-ccC---Cccc-------ceeeeEEEEeCCCCeEEEEcC-CCCeEEEEeCCCCCe
Q psy11351 148 LYNTRSSSPVAQF-DHE---GYYN-------SCTMKSCCFAGTQDEYVVSGS-DDFVLYMWRVPRDDI 203 (224)
Q Consensus 148 v~d~~~~~~~~~~-~~~---~~~~-------~~~~~~~~~~~~~~~~l~s~~-~d~~v~iw~~~~~~~ 203 (224)
.|+.... +..+ ... +... -.....++++| +++++++-+ .++.|+.|++.+++.
T Consensus 293 ~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 293 KITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp EECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEETTTTCEEEEEETTTTEE
T ss_pred EEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEeCCCCCEEEEEECCCCEE
Confidence 9987643 2222 211 1000 00123467777 688888888 899999999877765
No 198
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.51 E-value=4.2e-12 Score=96.78 Aligned_cols=177 Identities=11% Similarity=0.022 Sum_probs=120.2
Q ss_pred CCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEec----------CCCEEEEEecCCcccceeeccC-----
Q psy11351 15 NDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASAC----------DDGRVLLFDTRSREEATELAVN----- 78 (224)
Q Consensus 15 ~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~----- 78 (224)
.|++|.+||..+++.+..+ .+..+ .++|+|++ ++++++. .++.|.+||..+.+.+..+...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~ 105 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQ 105 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCC
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccc
Confidence 4789999999999888776 33333 89999999 6777765 3678999999988877776532
Q ss_pred -CcCeEEEEEcCCCCCeEEEecC--CCcEEEEecCCCceeeEeecCCCceeEEEEcCCC-CeEeeeecCCCcEEEECCC-
Q psy11351 79 -SGPFHAVMFNPVEARLVATANS--KDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAG-TQLLGLRRRLPPVLYNTRS- 153 (224)
Q Consensus 79 -~~~i~~~~~~~~~~~~l~~~~~--dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~v~d~~~- 153 (224)
......++++| ++++++++.. ++.|.+||+.+.+.+..+..... ...+.+.|++ ..+++.+.|+.+.+|+...
T Consensus 106 ~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~ 183 (361)
T 2oiz_A 106 GLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGED 183 (361)
T ss_dssp BCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTT
T ss_pred cCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCC
Confidence 23456899999 8888887763 57899999999876555122222 2335677765 5677788899999998865
Q ss_pred CCcc------eecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 154 SSPV------AQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 154 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
++.. ..+........+.. ++ ++..++..+.++.+.++|+....
T Consensus 184 g~~~~~~~~~~~~~~~~~~~~~~~-----~~-~g~~~~~~~~~~~v~v~d~~~~~ 232 (361)
T 2oiz_A 184 GKVASQSRSKQMFSVKDDPIFIAP-----AL-DKDKAHFVSYYGNVYSADFSGDE 232 (361)
T ss_dssp SSEEEEEECCCCSCTTTSCBCSCC-----EE-CSSEEEEEBTTSEEEEEECSSSS
T ss_pred CcEeeeccccceEcCCCCceEEEe-----cc-cCCEEEEEeCCCeEEEEEecCCC
Confidence 4433 11211111111112 23 45555556678999999987654
No 199
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.51 E-value=3.7e-12 Score=105.27 Aligned_cols=192 Identities=9% Similarity=-0.007 Sum_probs=128.1
Q ss_pred CCCCcceEEEEEeCCCc----------------EEEEeCCCCcee--eEE---eccCCeeEEEEcCCCCcEEEEecC---
Q psy11351 2 ASGDPIKVLRVIGNDDH----------------VISHDMASGDPI--DFY---LHERPVYGLSVDPSQDAIFASACD--- 57 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~----------------i~iwd~~~~~~~--~~~---~~~~~v~~~~~~~~~~~~l~s~~~--- 57 (224)
+.+++|+.|+.++.++. |++|++.+++.. ..+ .|...+..+.|+|+| ++|+.++.
T Consensus 177 ~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~ 255 (710)
T 2xdw_A 177 AWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDG-RYVLLSIREGC 255 (710)
T ss_dssp EECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECSS
T ss_pred EEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCC-CEEEEEEEccC
Confidence 34667888888888766 999999887632 233 245568899999999 66665543
Q ss_pred --CCEEEEEecCC------cc-cceeeccCCcCeEEEEEcCCCCCeEEEecC-C---CcEEEEecCCCc--eeeEeecCC
Q psy11351 58 --DGRVLLFDTRS------RE-EATELAVNSGPFHAVMFNPVEARLVATANS-K---DGIALYDTRKPK--EVLMQYGSC 122 (224)
Q Consensus 58 --d~~i~iwd~~~------~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d---g~v~i~d~~~~~--~~~~~~~~~ 122 (224)
+..|.+||+.+ +. ....+..+...+.. .|+| ++..|+..+. + +.|.+||+.++. ....+..+.
T Consensus 256 ~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 333 (710)
T 2xdw_A 256 DPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH 333 (710)
T ss_dssp SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC
T ss_pred CCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEec-cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC
Confidence 67899999986 43 35556666665555 4777 5555544433 2 369999998764 234445444
Q ss_pred C--ceeEEEEcCCCCeEeeeecCCC--cEEEECCCCCcceecc-cCCcccceeeeEEEEeCCCCeEE-EE---cCCCCeE
Q psy11351 123 E--SCMSIRFNKAGTQLLGLRRRLP--PVLYNTRSSSPVAQFD-HEGYYNSCTMKSCCFAGTQDEYV-VS---GSDDFVL 193 (224)
Q Consensus 123 ~--~v~~~~~~~~~~~l~~~~~d~~--v~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l-~s---~~~d~~v 193 (224)
. .+..+.|++++.++++...++. |++|++.+++.+..+. +.+. +..+.++| ++..+ ++ ....+.+
T Consensus 334 ~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~-----v~~~~~s~-d~~~l~~~~ss~~~P~~i 407 (710)
T 2xdw_A 334 EKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGS-----VVGYSGQK-KDTEIFYQFTSFLSPGII 407 (710)
T ss_dssp SSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSE-----EEEEECCT-TCSEEEEEEECSSCCCEE
T ss_pred CCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCce-----EEEEecCC-CCCEEEEEEeCCCCCCEE
Confidence 3 6888999977778888877774 6667876777666653 3222 23356667 45443 33 2346899
Q ss_pred EEEeCCCCC
Q psy11351 194 YMWRVPRDD 202 (224)
Q Consensus 194 ~iw~~~~~~ 202 (224)
+.||+.+++
T Consensus 408 ~~~d~~tg~ 416 (710)
T 2xdw_A 408 YHCDLTKEE 416 (710)
T ss_dssp EEEETTSSS
T ss_pred EEEECCCCc
Confidence 999998877
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.50 E-value=3.1e-11 Score=88.93 Aligned_cols=188 Identities=9% Similarity=-0.020 Sum_probs=129.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccce-eeccC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT-ELAVN 78 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~ 78 (224)
+.+..+.++++...++.|..||.+ ++..... .....+.++++.+++ .++++...++.|..||. +++... .....
T Consensus 63 ~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 63 TISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred EECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEecCCCC
Confidence 445667777777768889999986 4432222 245678999999988 78888777899999998 554322 22233
Q ss_pred CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeE-eecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcc
Q psy11351 79 SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLM-QYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPV 157 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~ 157 (224)
...+..+++++ ++.++++...++.|..||. +++.... .......+..++++++|+..++...++.|.+||. +++..
T Consensus 140 ~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 216 (299)
T 2z2n_A 140 GSYPSFITLGS-DNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT 216 (299)
T ss_dssp TCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCCceEEEcC-CCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE
Confidence 45689999999 7788887777889999998 5543322 2234456889999999987766666778999998 55533
Q ss_pred eecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCC
Q psy11351 158 AQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~ 199 (224)
.+....... ....+++.+ +++++++...++.|..||..
T Consensus 217 -~~~~~~~~~--~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 217 -EFKIPTPNA--RPHAITAGA-GIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp -EEECSSTTC--CEEEEEECS-TTCEEEEETTTTEEEEEETT
T ss_pred -EEECCCCCC--CceeEEECC-CCCEEEeccCCceEEEECCC
Confidence 231111111 133466666 57777776678899999983
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.49 E-value=2.7e-11 Score=89.75 Aligned_cols=188 Identities=11% Similarity=0.084 Sum_probs=123.9
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeecc----CCcC
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAV----NSGP 81 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~----~~~~ 81 (224)
.+.++++...++.|..||..+++. ..+.....+.+++++|++ +++++. ++.|.+||..+++....... ....
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG-~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~ 99 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSG-GYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNR 99 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTS-SEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCC-CEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCC
Confidence 456777877889999999988765 345567789999999998 655544 56899999987764322211 1235
Q ss_pred eEEEEEcCCCCCeEEEecCC---------CcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeee-ecCCCcEEEEC
Q psy11351 82 FHAVMFNPVEARLVATANSK---------DGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGL-RRRLPPVLYNT 151 (224)
Q Consensus 82 i~~~~~~~~~~~~l~~~~~d---------g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~v~d~ 151 (224)
++.++++| +++++++.... ..-.+|.+..................++|+|+++.|+.+ +.++.|.+|++
T Consensus 100 ~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 100 FNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp EEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred CCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEec
Confidence 78999999 77777654221 223445444322333333334456889999999977654 45678999987
Q ss_pred --CCCCcc--eec-c---cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 152 --RSSSPV--AQF-D---HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 152 --~~~~~~--~~~-~---~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
.++... ..+ . ..+. ...+++.+ ++++.++...++.|..||..+++..
T Consensus 179 d~~~G~~~~~~~~~~~~~~~~~-----p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 179 DLQTGQISNRRSVYKLEKEEQI-----PDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp CTTTCCEEEEEEEEECCGGGCE-----EEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEE
T ss_pred cCCCCcccCcEEEEECCCCCCC-----CCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEE
Confidence 445432 111 1 1122 23356666 6888888777889999999888764
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.48 E-value=1.1e-11 Score=92.13 Aligned_cols=187 Identities=10% Similarity=0.084 Sum_probs=124.4
Q ss_pred CCCc-ceEEEEEeCCCcEEEEeCCCCceeeE-Ee-----ccCCeeEEEEcCCCCcEEEEecCC---------------CE
Q psy11351 3 SGDP-IKVLRVIGNDDHVISHDMASGDPIDF-YL-----HERPVYGLSVDPSQDAIFASACDD---------------GR 60 (224)
Q Consensus 3 ~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~-~~-----~~~~v~~~~~~~~~~~~l~s~~~d---------------~~ 60 (224)
.+.. ++++++.. .+.|.+||.+ ++.... .. ....+.++++++++ +++++...+ +.
T Consensus 78 ~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~ 154 (314)
T 1pjx_A 78 CDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGS 154 (314)
T ss_dssp ECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEE
T ss_pred EecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCe
Confidence 3445 66555544 4479999998 766544 31 12458899999998 677776654 57
Q ss_pred EEEEecCCcccceeeccCCcCeEEEEEc----CCCCC-eEEEecCCCcEEEEecC-CCce-----eeEeecCC-CceeEE
Q psy11351 61 VLLFDTRSREEATELAVNSGPFHAVMFN----PVEAR-LVATANSKDGIALYDTR-KPKE-----VLMQYGSC-ESCMSI 128 (224)
Q Consensus 61 i~iwd~~~~~~~~~~~~~~~~i~~~~~~----~~~~~-~l~~~~~dg~v~i~d~~-~~~~-----~~~~~~~~-~~v~~~ 128 (224)
|..||.. ++.. .+..+......++++ | +++ ++++...++.|.+||+. +++. ...+..+. ..+..+
T Consensus 155 l~~~~~~-g~~~-~~~~~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i 231 (314)
T 1pjx_A 155 IYCFTTD-GQMI-QVDTAFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM 231 (314)
T ss_dssp EEEECTT-SCEE-EEEEEESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE
T ss_pred EEEECCC-CCEE-EeccCCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce
Confidence 7777765 4432 222333456889999 8 664 45555678899999986 3321 11122233 567889
Q ss_pred EEcCCCCeEeeeecCCCcEEEECCCCCcceecc-cCCcccceeeeEEEEeCCCCe-EEEEcCCCCeEEEEeCCCC
Q psy11351 129 RFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFD-HEGYYNSCTMKSCCFAGTQDE-YVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 129 ~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~v~iw~~~~~ 201 (224)
+++++|+++++...++.|.+||..+++.+..+. +... ...++++| +++ ++++...++.|..|++...
T Consensus 232 ~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~-----~~~i~~~~-dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 232 DFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEK-----PSNLHFKP-QTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSC-----EEEEEECT-TSSEEEEEETTTTEEEEEECSSC
T ss_pred EECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCC-----ceeEEECC-CCCEEEEEeCCCCeEEEEeCCCC
Confidence 999999888877778889999998777666553 2222 33466767 576 5666667789999998754
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.47 E-value=5.6e-12 Score=93.81 Aligned_cols=194 Identities=11% Similarity=0.036 Sum_probs=126.3
Q ss_pred CCCCcceEEEE-------EeCCCcEEEEeCCCCceeeEEe-----ccCCeeEEEEcCC-CCcEEEEecCCCEEEEEecCC
Q psy11351 2 ASGDPIKVLRV-------IGNDDHVISHDMASGDPIDFYL-----HERPVYGLSVDPS-QDAIFASACDDGRVLLFDTRS 68 (224)
Q Consensus 2 a~~~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~ 68 (224)
+.+..++++++ +..++.|.+||..+++...... +...+.+++++++ + +++++.. .+.|.+||..
T Consensus 24 ~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g-~l~v~~~-~~~l~~~d~~- 100 (314)
T 1pjx_A 24 VFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN-QLFVADM-RLGLLVVQTD- 100 (314)
T ss_dssp EECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS-EEEEEET-TTEEEEEETT-
T ss_pred eECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCC-cEEEEEC-CCCEEEEeCC-
Confidence 34556777777 5778999999998887654433 5577999999999 6 6666554 4478899988
Q ss_pred ccccee-ecc----CCcCeEEEEEcCCCCCeEEEecCC---------------CcEEEEecCCCceeeEeecCCCceeEE
Q psy11351 69 REEATE-LAV----NSGPFHAVMFNPVEARLVATANSK---------------DGIALYDTRKPKEVLMQYGSCESCMSI 128 (224)
Q Consensus 69 ~~~~~~-~~~----~~~~i~~~~~~~~~~~~l~~~~~d---------------g~v~i~d~~~~~~~~~~~~~~~~v~~~ 128 (224)
++.... ... ....+.++++++ +++++++...+ +.|..||.. ++ ...+..+......+
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~~i 177 (314)
T 1pjx_A 101 GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-MIQVDTAFQFPNGI 177 (314)
T ss_dssp SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-EEEEEEEESSEEEE
T ss_pred CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CC-EEEeccCCCCcceE
Confidence 654322 211 123578999999 77877776554 567777765 43 33333333456789
Q ss_pred EEc----CCCCeEeee-ecCCCcEEEECC-CCCcc--eec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCC
Q psy11351 129 RFN----KAGTQLLGL-RRRLPPVLYNTR-SSSPV--AQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 129 ~~~----~~~~~l~~~-~~d~~v~v~d~~-~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~ 199 (224)
+|+ |+++.++++ ..++.|.+||+. +++.. ..+ ....... .....+++.+ +++++++...++.|.+||..
T Consensus 178 ~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~-~~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 178 AVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHE-GGADGMDFDE-DNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSS-CEEEEEEEBT-TCCEEEEEETTTEEEEECTT
T ss_pred EEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCC-CCCCceEECC-CCCEEEEEcCCCEEEEEcCC
Confidence 999 999766555 456789999976 34311 111 1111100 1123366777 68888887778899999988
Q ss_pred CCCe
Q psy11351 200 RDDI 203 (224)
Q Consensus 200 ~~~~ 203 (224)
+++.
T Consensus 256 ~g~~ 259 (314)
T 1pjx_A 256 GGQP 259 (314)
T ss_dssp CBSC
T ss_pred CCcE
Confidence 6654
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.45 E-value=9.4e-11 Score=86.41 Aligned_cols=191 Identities=9% Similarity=-0.050 Sum_probs=130.9
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccc-eeeccC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEA-TELAVN 78 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~ 78 (224)
+.++.++++++...++.|.+||.. ++..... .....+.++++.+++ +++++...++.|..+|.. ++.. ..+...
T Consensus 26 ~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~ 102 (300)
T 2qc5_A 26 TSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGFTEYPLPQP 102 (300)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECSST
T ss_pred eECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEECCC-CCeEEecCCCC
Confidence 445667777777778999999988 6554422 234678999999998 777777778899999987 5432 122223
Q ss_pred CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeE-eecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcc
Q psy11351 79 SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLM-QYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPV 157 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~ 157 (224)
...+..+++.+ +++++++...++.|..+|.. ++.... .......+..++++++++..++...++.|..+|. +++..
T Consensus 103 ~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 103 DSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp TCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence 45789999998 78888887778899999987 443322 2224567899999999996666555677999988 44433
Q ss_pred eecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 158 AQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
. +....... ....+++.+ ++.++++....+.|..|+. +++.
T Consensus 180 ~-~~~~~~~~--~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~ 220 (300)
T 2qc5_A 180 E-YPLPTNAA--APVGITSGN-DGALWFVEIMGNKIGRITT-TGEI 220 (300)
T ss_dssp E-EECSSTTC--CEEEEEECT-TSSEEEEETTTTEEEEECT-TCCE
T ss_pred E-eeCCCCCC--CcceEEECC-CCCEEEEccCCCEEEEEcC-CCcE
Confidence 2 32111111 123456666 6777777777788999998 4443
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.44 E-value=1.5e-10 Score=85.30 Aligned_cols=190 Identities=8% Similarity=-0.052 Sum_probs=128.3
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccce-eeccC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT-ELAVN 78 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~ 78 (224)
+.+..++++++...++.|..+|.. ++..... .....+.++++.+++ +++++...++.|..+|.. ++... .+...
T Consensus 68 ~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~ 144 (300)
T 2qc5_A 68 IVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEYDLPNK 144 (300)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEECSST
T ss_pred EECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEEEccCCCC
Confidence 345667777776667889999988 6554322 234678999999988 788877778899999987 54332 22223
Q ss_pred CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeE-eecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcc
Q psy11351 79 SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLM-QYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPV 157 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~ 157 (224)
...+..+++.+ +++++++...++.|..||. +++.... .......+..++++++|+..++....+.|.+||. +++..
T Consensus 145 ~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 145 GSYPAFITLGS-DNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEIS 221 (300)
T ss_dssp TCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCceeEEECC-CCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEE
Confidence 45689999999 7777777767888999998 4433321 1134456889999999877666656667999998 44433
Q ss_pred eecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 158 AQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
.... ..... ....+++.+ +++++++...++.|..|+. +++
T Consensus 222 ~~~~-~~~~~--~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~ 261 (300)
T 2qc5_A 222 EYDI-PTPNA--RPHAITAGK-NSEIWFTEWGANQIGRITN-DNT 261 (300)
T ss_dssp EEEC-SSTTC--CEEEEEECS-TTCEEEEETTTTEEEEECT-TSC
T ss_pred EEEC-CCCCC--CceEEEECC-CCCEEEeccCCCeEEEECC-CCc
Confidence 2211 11111 123466666 5777777767789999998 443
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.44 E-value=3.3e-12 Score=97.44 Aligned_cols=146 Identities=10% Similarity=0.064 Sum_probs=110.2
Q ss_pred CeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc---------cc-eeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEE
Q psy11351 38 PVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE---------EA-TELAVNSGPFHAVMFNPVEARLVATANSKDGIALY 107 (224)
Q Consensus 38 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---------~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~ 107 (224)
.++.+++++.. .++++|+.+ .+.+|++...+ .. .....+.. |+.++| ++.+|+++ .++.|++|
T Consensus 39 ~~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f---d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF---HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE---ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE---CCCEEEEE-cCCcEEEE
Confidence 68999999998 789999887 55669876443 11 11224556 999999 56788888 88999999
Q ss_pred ecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEc
Q psy11351 108 DTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSG 187 (224)
Q Consensus 108 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 187 (224)
|+++.........++..+.++.+.+. .+++++.||.+.+||+.++.... +.. .+.+++|+| +| ++.|
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~-----~Vs~v~WSp-kG--~~vg 178 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQ-----NVTSFDVTN-SQ--LAVL 178 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEE-----SEEEEEECS-SE--EEEE
T ss_pred EchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccC-----CceEEEEcC-Cc--eEEE
Confidence 99887665556667778888877654 38888999999999998776542 122 355689998 56 6778
Q ss_pred CCCCeEEEEeCCCCCe
Q psy11351 188 SDDFVLYMWRVPRDDI 203 (224)
Q Consensus 188 ~~d~~v~iw~~~~~~~ 203 (224)
..||.+++|+...++.
T Consensus 179 ~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 179 LKDRSFQSFAWRNGEM 194 (388)
T ss_dssp ETTSCEEEEEEETTEE
T ss_pred EcCCcEEEEcCCCccc
Confidence 8899999998877663
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.43 E-value=1.5e-11 Score=102.14 Aligned_cols=188 Identities=18% Similarity=0.096 Sum_probs=120.6
Q ss_pred CCCCcceEEEEEeCC-----CcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCC--------------EEE
Q psy11351 2 ASGDPIKVLRVIGND-----DHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDG--------------RVL 62 (224)
Q Consensus 2 a~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~--------------~i~ 62 (224)
+.+++|++|+.++.+ .+|++||+.+++.+....+...+..++|+|+ ..++++ +.++ .|+
T Consensus 169 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~-~~~~~~~~~~~~~~~~~~~v~ 246 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYS-RFAEPKEGQAFQALNYNQTVW 246 (741)
T ss_dssp EECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEE-ECCCC--------CCCCCEEE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEE-EecCcccccccccCCCCCEEE
Confidence 346778888877654 4699999999987654323333468899999 444444 4443 489
Q ss_pred EEecCCcccc--eeec--cCCcCeEEEEEcCCCCCeEEEecCC-----CcEEEEecCCCc-e-eeEeecCCCceeEEEEc
Q psy11351 63 LFDTRSREEA--TELA--VNSGPFHAVMFNPVEARLVATANSK-----DGIALYDTRKPK-E-VLMQYGSCESCMSIRFN 131 (224)
Q Consensus 63 iwd~~~~~~~--~~~~--~~~~~i~~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~-~-~~~~~~~~~~v~~~~~~ 131 (224)
+|++.+++.. ..+. .+...+..+.|+| ++++++..+.+ ..|.+||+.++. . ...+..+...+... ++
T Consensus 247 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~ 324 (741)
T 1yr2_A 247 LHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VD 324 (741)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EE
T ss_pred EEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-Ee
Confidence 9998776532 2222 2333588999999 88777766543 379999998762 2 44555555445444 34
Q ss_pred CCCCeEeeeecC----CCcEEEECCCCC-cceec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCC
Q psy11351 132 KAGTQLLGLRRR----LPPVLYNTRSSS-PVAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 132 ~~~~~l~~~~~d----~~v~v~d~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~ 199 (224)
|+|+.|+..+.+ +.|.+||+.++. ....+ .+...+ +..+.++ ++.++++...|+..++|.+.
T Consensus 325 ~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~----l~~~~~~--~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 325 GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDN----LESVGIA--GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSE----EEEEEEE--BTEEEEEEEETTEEEEEEEE
T ss_pred ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCe----EEEEEEE--CCEEEEEEEECCEEEEEEEe
Confidence 889988877654 348999988752 22233 322221 2234454 56788888889877777554
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.43 E-value=5.3e-11 Score=92.12 Aligned_cols=194 Identities=10% Similarity=0.059 Sum_probs=127.1
Q ss_pred CCCCCcceEEEEEeCCC--cEEEEeCCCCceeeEE----e-ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccce
Q psy11351 1 MASGDPIKVLRVIGNDD--HVISHDMASGDPIDFY----L-HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~----~-~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 73 (224)
++.+..++.|+++..++ .|.+++...+...... . ....+.+++++|++..+++ +..++.|+.||..++....
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~ 254 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTL 254 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEE
Confidence 34566777888887766 7888888766543333 2 4567889999995424444 6778999999998765322
Q ss_pred e----eccCCcCe--EEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecC---------------CCceeEEEEcC
Q psy11351 74 E----LAVNSGPF--HAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGS---------------CESCMSIRFNK 132 (224)
Q Consensus 74 ~----~~~~~~~i--~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~---------------~~~v~~~~~~~ 132 (224)
. ..++...- ..++|+|.++.++++-..++.|+.||.... ...+.++ -.....++++|
T Consensus 255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~ 332 (409)
T 3hrp_A 255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE 332 (409)
T ss_dssp EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT
T ss_pred EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC
Confidence 1 12222222 389999955777777778889999997643 2233222 13478899999
Q ss_pred CCCeEeeee-cCCCcEEEECCCCCcceecccC---Cccc-------ceeeeEEEEeCCCCeEEEEcCCCCeEEEEeC
Q psy11351 133 AGTQLLGLR-RRLPPVLYNTRSSSPVAQFDHE---GYYN-------SCTMKSCCFAGTQDEYVVSGSDDFVLYMWRV 198 (224)
Q Consensus 133 ~~~~l~~~~-~d~~v~v~d~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~ 198 (224)
+|+++++-. .++.|+.|++.++.......+. +... --....+++.+ ++.++++-..+++|+.+++
T Consensus 333 dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~-~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 333 DGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDG-EGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS-SSEEEEEESTTCEEEEEEE
T ss_pred CCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcC-CCCEEEEECCCCeEEEEEe
Confidence 999777766 7888999998777543322221 0000 01133466777 4788888888888887764
No 209
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.41 E-value=1.3e-11 Score=95.38 Aligned_cols=107 Identities=10% Similarity=0.012 Sum_probs=77.2
Q ss_pred cceEEEEEeCC----CcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEec----------CCCEEEEEecCCccc
Q psy11351 6 PIKVLRVIGND----DHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASAC----------DDGRVLLFDTRSREE 71 (224)
Q Consensus 6 ~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~d~~i~iwd~~~~~~ 71 (224)
+...+++...+ ++|.++|..+++.+..+.-...- .+.++|++ ++++.+. .++.|.++|..+++.
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDg-k~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDG-SFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCC-CEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 33444554444 79999999999999888433334 89999999 5555554 467999999999988
Q ss_pred ceeeccC-------CcCeEEEEEcCCCCCeEEEecC--CCcEEEEecCCCcee
Q psy11351 72 ATELAVN-------SGPFHAVMFNPVEARLVATANS--KDGIALYDTRKPKEV 115 (224)
Q Consensus 72 ~~~~~~~-------~~~i~~~~~~~~~~~~l~~~~~--dg~v~i~d~~~~~~~ 115 (224)
+..+... ...-..+.|+| ++++++.+.. ++.|.+.|+.+.+..
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred EEEEECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEE
Confidence 7776431 12345788999 7777777653 578999999887544
No 210
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.41 E-value=8.4e-11 Score=85.03 Aligned_cols=193 Identities=7% Similarity=0.034 Sum_probs=131.3
Q ss_pred CCCcceEEEEEeC--CCcEEEEeCCCCceeeEEeccC--CeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccC
Q psy11351 3 SGDPIKVLRVIGN--DDHVISHDMASGDPIDFYLHER--PVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVN 78 (224)
Q Consensus 3 ~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 78 (224)
+++++.++++.+. ++.|+++|+.+++.+..+.-.. ....+++. +..+.++.-.++.+.++|..+.+.+..+...
T Consensus 28 ~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g 105 (266)
T 2iwa_A 28 YAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ 105 (266)
T ss_dssp ECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECC
T ss_pred EeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECC
Confidence 3444666666553 5799999999999888763222 23345555 4367777778899999999999888877533
Q ss_pred -CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec--CC---CceeEEEEcCCCCeEeeeecCCCcEEEECC
Q psy11351 79 -SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG--SC---ESCMSIRFNKAGTQLLGLRRRLPPVLYNTR 152 (224)
Q Consensus 79 -~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~ 152 (224)
... ..+++ ++..++++..++.|.++|..+.+....+.- .. .....+.|. +|...+....++.|.+.|+.
T Consensus 106 ~~~g---~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~ 180 (266)
T 2iwa_A 106 MKDG---WGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAK 180 (266)
T ss_dssp SSSC---CEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETT
T ss_pred CCCe---EEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECC
Confidence 222 23445 444444555688999999998877666552 11 235678888 66544444467889999999
Q ss_pred CCCcceecccCCc---------ccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 153 SSSPVAQFDHEGY---------YNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 153 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
+++.+..+...+. ........++|+|....+++++...+.|++.++...+
T Consensus 181 tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 181 DGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp TCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred CCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 9998888743211 1112345578888666788999999999999887653
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.40 E-value=1.5e-10 Score=88.08 Aligned_cols=192 Identities=10% Similarity=0.001 Sum_probs=123.5
Q ss_pred CCcceEEEEEeC-----CCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEec----------CCCEEEEEecCC
Q psy11351 4 GDPIKVLRVIGN-----DDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASAC----------DDGRVLLFDTRS 68 (224)
Q Consensus 4 ~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~d~~i~iwd~~~ 68 (224)
..+++.+..... ++.|.+.|..+++.+..+....... +.++|++ ++++.+. .++.|.+||..+
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG-~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDG-SFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCC-CEEEEEcccccccccCCCCCEEEEEECCC
Confidence 344555555544 6899999999999988884333334 9999999 5555543 367899999999
Q ss_pred cccceeeccCC-------cCeEEEEEcCCCCCeEEEecC--CCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEee
Q psy11351 69 REEATELAVNS-------GPFHAVMFNPVEARLVATANS--KDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLG 139 (224)
Q Consensus 69 ~~~~~~~~~~~-------~~i~~~~~~~~~~~~l~~~~~--dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 139 (224)
.+.+..+.... ..-..+.|+| ++++++.+.. ++.|.++|+.+.+....+.-.. . ...+....+.+++
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFM 194 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEE
T ss_pred CeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEE
Confidence 98877764321 1345789999 7787777653 6889999999998776664321 1 2223333456667
Q ss_pred eecCCCcEEEECCC-CCcceecc-cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 140 LRRRLPPVLYNTRS-SSPVAQFD-HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 140 ~~~d~~v~v~d~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
.+.||.+.+.++.+ ++...... .........+....|.+.++++++. +.+|.|++.|+.++.
T Consensus 195 ~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~v-s~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWP-TYTGKIHQIDLSSGD 258 (386)
T ss_dssp EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEE-BTTSEEEEEECTTSS
T ss_pred ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEE-eCCCEEEEEECCCCc
Confidence 77788888888865 44422111 1111111112223454336766554 447899999997765
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.36 E-value=4.2e-11 Score=90.60 Aligned_cols=194 Identities=8% Similarity=0.080 Sum_probs=123.0
Q ss_pred CCCCcceEEEEEe--CCCcEEEEeCCCCceeeE-------EeccCCeeEEEEcCCCCcEEEEecC-----CCEEEEEecC
Q psy11351 2 ASGDPIKVLRVIG--NDDHVISHDMASGDPIDF-------YLHERPVYGLSVDPSQDAIFASACD-----DGRVLLFDTR 67 (224)
Q Consensus 2 a~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~s~~~-----d~~i~iwd~~ 67 (224)
+++..|+++++.. .++.++||.+.+++.... .++-..+..+++++++ +++++-.. ++.|.+||+.
T Consensus 23 a~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~ 101 (343)
T 2qe8_A 23 TLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTL 101 (343)
T ss_dssp EECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETT
T ss_pred EECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECC
Confidence 5666788888864 234355555545543311 0245689999999998 66665433 5799999999
Q ss_pred Ccccceeecc------CCcCeEEEEEcCCCCCeEEEec---CCCcEEEEecCCCceeeEeecC-----------------
Q psy11351 68 SREEATELAV------NSGPFHAVMFNPVEARLVATAN---SKDGIALYDTRKPKEVLMQYGS----------------- 121 (224)
Q Consensus 68 ~~~~~~~~~~------~~~~i~~~~~~~~~~~~l~~~~---~dg~v~i~d~~~~~~~~~~~~~----------------- 121 (224)
+++.+..+.. +......+++++.++..+++.. .++.|.+||+.+++....+..|
T Consensus 102 tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~ 181 (343)
T 2qe8_A 102 NNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPV 181 (343)
T ss_dssp TTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEEC
T ss_pred CCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEE
Confidence 8886655532 1234689999983455556655 6788999999876543333211
Q ss_pred ------------CCceeEEEEcCCCCeEeeeecCCCcEEEECCC-----CCc--------ceecccCCcccceeeeEEEE
Q psy11351 122 ------------CESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS-----SSP--------VAQFDHEGYYNSCTMKSCCF 176 (224)
Q Consensus 122 ------------~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~-----~~~--------~~~~~~~~~~~~~~~~~~~~ 176 (224)
...+..++|+|+|+.|+.+..++. ++|.+.. +.. +....+.+.... +++
T Consensus 182 ~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdg-----ia~ 255 (343)
T 2qe8_A 182 QIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDG-----ISI 255 (343)
T ss_dssp BEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSC-----EEE
T ss_pred EeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCce-----EEE
Confidence 123578999999998888876653 4554421 110 011112222233 556
Q ss_pred eCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 177 AGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 177 ~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.+ ++.++++...++.|.+||..+++.
T Consensus 256 d~-~G~l~va~~~~~~V~~~d~~~G~~ 281 (343)
T 2qe8_A 256 DK-DHNIYVGDLAHSAIGVITSADRAY 281 (343)
T ss_dssp CT-TCCEEEEEGGGTEEEEEETTTTEE
T ss_pred CC-CCCEEEEccCCCeEEEEECCCCCE
Confidence 66 689999988899999999855543
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.35 E-value=8.9e-11 Score=86.97 Aligned_cols=178 Identities=8% Similarity=0.045 Sum_probs=111.3
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEec-----cCCeeEEEEcCCCCcEEEEecC---------CCEEEEEecC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLH-----ERPVYGLSVDPSQDAIFASACD---------DGRVLLFDTR 67 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~s~~~---------d~~i~iwd~~ 67 (224)
+.+.+++++++ . ++.|.+||.++++....... ...+++++++|+| +++++... ...-.+|.+.
T Consensus 60 ~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 60 ALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp EEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred EECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEE
Confidence 44566775554 3 56899999988876544422 2358899999998 66665421 1223444443
Q ss_pred CcccceeeccCCcCeEEEEEcCCCCC-eEEEecCCCcEEEEecC--CCcee--eEe---ecCCCceeEEEEcCCCCeEee
Q psy11351 68 SREEATELAVNSGPFHAVMFNPVEAR-LVATANSKDGIALYDTR--KPKEV--LMQ---YGSCESCMSIRFNKAGTQLLG 139 (224)
Q Consensus 68 ~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~v~i~d~~--~~~~~--~~~---~~~~~~v~~~~~~~~~~~l~~ 139 (224)
.......+.......+.++|+| +++ ++++.+.++.|.+||+. ++... ..+ .........++++++|++.++
T Consensus 137 ~~g~~~~~~~~~~~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva 215 (297)
T 3g4e_A 137 PDHHVKKYFDQVDISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA 215 (297)
T ss_dssp TTSCEEEEEEEESBEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE
T ss_pred CCCCEEEEeeccccccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEE
Confidence 3222222333334568999999 665 45666678899999973 44321 111 123456789999999987777
Q ss_pred eecCCCcEEEECCCCCcceecccC-CcccceeeeEEEEe-CCCCeEEEEcC
Q psy11351 140 LRRRLPPVLYNTRSSSPVAQFDHE-GYYNSCTMKSCCFA-GTQDEYVVSGS 188 (224)
Q Consensus 140 ~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~s~~ 188 (224)
....+.|..||..+++.+..+... .. ...++|. |+...++++..
T Consensus 216 ~~~~~~v~~~d~~tG~~~~~i~~p~~~-----~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 216 CYNGGRVIRLDPVTGKRLQTVKLPVDK-----TTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EETTTEEEEECTTTCCEEEEEECSSSB-----EEEEEEESGGGCEEEEEEB
T ss_pred EcCCCEEEEEcCCCceEEEEEECCCCC-----ceEEEEeCCCCCEEEEEcC
Confidence 777778999999989888777432 23 3347776 53234445443
No 214
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.35 E-value=2.5e-10 Score=93.76 Aligned_cols=181 Identities=10% Similarity=0.095 Sum_probs=128.0
Q ss_pred CCcEEEEeCCCCceeeEEeccC---------------------------------CeeEEEEcCCCCcEEEEecCCC---
Q psy11351 16 DDHVISHDMASGDPIDFYLHER---------------------------------PVYGLSVDPSQDAIFASACDDG--- 59 (224)
Q Consensus 16 dg~i~iwd~~~~~~~~~~~~~~---------------------------------~v~~~~~~~~~~~~l~s~~~d~--- 59 (224)
++.|+.+|..+++.+..+.... ....++++|++ .+++.+..++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~-~~vy~~~~~~~~w 267 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL-NTMYVGTGNGSPW 267 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESS
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC-CEEEEECCCCccc
Confidence 7899999999999887662111 11357788887 6777776664
Q ss_pred ----------------EEEEEecCCcccceeecc--CC-------cCeEEEEEcCCCC---CeEEEecCCCcEEEEecCC
Q psy11351 60 ----------------RVLLFDTRSREEATELAV--NS-------GPFHAVMFNPVEA---RLVATANSKDGIALYDTRK 111 (224)
Q Consensus 60 ----------------~i~iwd~~~~~~~~~~~~--~~-------~~i~~~~~~~~~~---~~l~~~~~dg~v~i~d~~~ 111 (224)
.|..+|.++++.+..++. |. .....+.... ++ ..++.++.+|.++++|.++
T Consensus 268 ~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~t 346 (677)
T 1kb0_A 268 SHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVLDRTN 346 (677)
T ss_dssp CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTT
T ss_pred cCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEEECCC
Confidence 599999999998777653 21 1122233333 44 6888999999999999999
Q ss_pred CceeeEeecCC-----------Cce------------------------eEEEEcCCCCeEeeeecC-------------
Q psy11351 112 PKEVLMQYGSC-----------ESC------------------------MSIRFNKAGTQLLGLRRR------------- 143 (224)
Q Consensus 112 ~~~~~~~~~~~-----------~~v------------------------~~~~~~~~~~~l~~~~~d------------- 143 (224)
++.+....... .++ ..++|+|++..+++...+
T Consensus 347 G~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~ 426 (677)
T 1kb0_A 347 GKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEF 426 (677)
T ss_dssp CCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCT
T ss_pred CCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccc
Confidence 98765543110 001 156889988888775431
Q ss_pred ------------------------------CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeE
Q psy11351 144 ------------------------------LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVL 193 (224)
Q Consensus 144 ------------------------------~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v 193 (224)
+.|..||+.+++.+..+.+........+.. .+.+++.++.|+.+
T Consensus 427 g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~------~g~~v~~g~~dg~l 500 (677)
T 1kb0_A 427 NQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTT------AGNVVFQGTADGRL 500 (677)
T ss_dssp TCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE------TTTEEEEECTTSEE
T ss_pred ccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEe------CCCEEEEECCCCcE
Confidence 679999999999888876555444444443 67788888999999
Q ss_pred EEEeCCCCCeE
Q psy11351 194 YMWRVPRDDIY 204 (224)
Q Consensus 194 ~iw~~~~~~~~ 204 (224)
++||..+++..
T Consensus 501 ~a~D~~tG~~l 511 (677)
T 1kb0_A 501 VAYHAATGEKL 511 (677)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCcee
Confidence 99999999885
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.34 E-value=7e-10 Score=83.26 Aligned_cols=185 Identities=12% Similarity=0.019 Sum_probs=118.1
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeecc----CCcCe
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAV----NSGPF 82 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~----~~~~i 82 (224)
+.++++...++.|..||.++++.. .+.....+.++.|+|++ +++++. .+ .|.+||..+++....... ....+
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg-~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~ 136 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISDS-KQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRS 136 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEETT-EEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCCC-eEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCC
Confidence 567777778899999999887653 34456789999999998 666654 34 599999887764322111 12358
Q ss_pred EEEEEcCCCCCeEEEecC------CCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeee-cCCCcEEEECC--C
Q psy11351 83 HAVMFNPVEARLVATANS------KDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNTR--S 153 (224)
Q Consensus 83 ~~~~~~~~~~~~l~~~~~------dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~--~ 153 (224)
.+++++| +++++++... .+.|..+| ++ ....+.........++|+|+++.++.+. .++.|.+|++. +
T Consensus 137 ~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g-~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~ 212 (326)
T 2ghs_A 137 NDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KG-KVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDART 212 (326)
T ss_dssp EEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TT-EEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTT
T ss_pred CCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CC-cEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEccccc
Confidence 8999999 7777665532 24566666 34 3333333334567899999998776554 46789999986 5
Q ss_pred C-Ccc--eec-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 154 S-SPV--AQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 154 ~-~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
+ +.. ..+ ....... ....+++.+ ++.+.++...++.|..|+. +++.
T Consensus 213 Gl~~~~~~~~~~~~~~~~--~p~gi~~d~-~G~lwva~~~~~~v~~~d~-~g~~ 262 (326)
T 2ghs_A 213 GLPTGKAEVFIDSTGIKG--GMDGSVCDA-EGHIWNARWGEGAVDRYDT-DGNH 262 (326)
T ss_dssp CCBSSCCEEEEECTTSSS--EEEEEEECT-TSCEEEEEETTTEEEEECT-TCCE
T ss_pred CCcccCceEEEECCCCCC--CCCeeEECC-CCCEEEEEeCCCEEEEECC-CCCE
Confidence 5 321 112 1110000 122356666 5777776666788999998 4544
No 216
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.34 E-value=4.7e-10 Score=92.32 Aligned_cols=181 Identities=9% Similarity=0.077 Sum_probs=125.4
Q ss_pred CCcEEEEeCCCCceeeEEec---c-----------------------------CCeeEEEEcCCCCcEEEEecCCCE---
Q psy11351 16 DDHVISHDMASGDPIDFYLH---E-----------------------------RPVYGLSVDPSQDAIFASACDDGR--- 60 (224)
Q Consensus 16 dg~i~iwd~~~~~~~~~~~~---~-----------------------------~~v~~~~~~~~~~~~l~s~~~d~~--- 60 (224)
+|.|+.||.++|+.+..+.. . .....++++|+. .+++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~-~~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL-NLLYIGVGNGSLWD 260 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC-CEEEEeCCCCCccc
Confidence 78999999999998766521 0 011257888887 68888887764
Q ss_pred ----------------EEEEecCCcccceeecc--CC-------cCeEEEEEcCCCCC---eEEEecCCCcEEEEecCCC
Q psy11351 61 ----------------VLLFDTRSREEATELAV--NS-------GPFHAVMFNPVEAR---LVATANSKDGIALYDTRKP 112 (224)
Q Consensus 61 ----------------i~iwd~~~~~~~~~~~~--~~-------~~i~~~~~~~~~~~---~l~~~~~dg~v~i~d~~~~ 112 (224)
|..+|.++++.+..++. |. .+........ ++. .++.++.+|.++++|.+++
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG 339 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI-DGKPRKVLMQAPKNGFFYVIDRATG 339 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTC
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc-CCcEEEEEEEECCCCeEEEEECCCC
Confidence 99999999998877653 21 1122222222 333 7888999999999999999
Q ss_pred ceeeEeecCC---------------------------------------CceeEEEEcCCCCeEeeeec-----------
Q psy11351 113 KEVLMQYGSC---------------------------------------ESCMSIRFNKAGTQLLGLRR----------- 142 (224)
Q Consensus 113 ~~~~~~~~~~---------------------------------------~~v~~~~~~~~~~~l~~~~~----------- 142 (224)
+.+....... ..-..++|+|+...+++...
T Consensus 340 ~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~ 419 (689)
T 1yiq_A 340 ELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPE 419 (689)
T ss_dssp CEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSS
T ss_pred CEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccc
Confidence 7753321100 00123688888777776422
Q ss_pred ----------------------------------CCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcC
Q psy11351 143 ----------------------------------RLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS 188 (224)
Q Consensus 143 ----------------------------------d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 188 (224)
++.|+.||+.+++.+..+.+........+.. .+.+++.|+
T Consensus 420 ~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~t------agglvf~gt 493 (689)
T 1yiq_A 420 APKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLST------AGNLVFEGS 493 (689)
T ss_dssp CCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE------TTTEEEEEC
T ss_pred cccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceE------CCCEEEEEC
Confidence 3669999999999888875544444333333 677888899
Q ss_pred CCCeEEEEeCCCCCeE
Q psy11351 189 DDFVLYMWRVPRDDIY 204 (224)
Q Consensus 189 ~d~~v~iw~~~~~~~~ 204 (224)
.|+.++.||.++|++.
T Consensus 494 ~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 494 ADGRVIAYAADTGEKL 509 (689)
T ss_dssp TTSEEEEEETTTCCEE
T ss_pred CCCcEEEEECCCCccc
Confidence 9999999999999884
No 217
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.33 E-value=4e-10 Score=80.76 Aligned_cols=179 Identities=9% Similarity=0.128 Sum_probs=120.5
Q ss_pred cceEEEEEeCCC--cEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeE
Q psy11351 6 PIKVLRVIGNDD--HVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFH 83 (224)
Q Consensus 6 ~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~ 83 (224)
++.++.+.+.+| .|+.+|+++++.+....-..........+.+..+......++.+.+||..+.+.+.++...... .
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG-~ 130 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG-W 130 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC-C
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc-e
Confidence 356777777776 8999999999998877544555443333344456666777899999999999988888643221 2
Q ss_pred EEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec--CC---CceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcce
Q psy11351 84 AVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG--SC---ESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVA 158 (224)
Q Consensus 84 ~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~ 158 (224)
.++ + ++..|+.+..++.|.++|..+.+....+.- .. ..+..+.|. +|+..+..-.++.|.+.|..+++.+.
T Consensus 131 glt--~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~ 206 (262)
T 3nol_A 131 GLT--H-NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTG 206 (262)
T ss_dssp CEE--E-CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEE
T ss_pred EEe--c-CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEE
Confidence 333 4 445555555578899999998877666543 22 234457776 66655545467889999999999888
Q ss_pred ecccCCcc--------cceeeeEEEEeCCCCeEEEEcCC
Q psy11351 159 QFDHEGYY--------NSCTMKSCCFAGTQDEYVVSGSD 189 (224)
Q Consensus 159 ~~~~~~~~--------~~~~~~~~~~~~~~~~~l~s~~~ 189 (224)
.+...+-. ..-...-++|+|....+++||-.
T Consensus 207 ~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 207 IIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 77432111 11234568888866667777643
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.32 E-value=6.9e-11 Score=97.47 Aligned_cols=189 Identities=13% Similarity=0.139 Sum_probs=116.8
Q ss_pred CCCCcceEEEEE-----eCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCC-------------EEEE
Q psy11351 2 ASGDPIKVLRVI-----GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDG-------------RVLL 63 (224)
Q Consensus 2 a~~~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~-------------~i~i 63 (224)
+.+++|++||-+ +.+.+|++||+.+++.+...........++|+ ++ +.|+.++.+. .|++
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg-~~l~y~~~~~~~~~~~~~~~~~~~v~~ 212 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GN-EGFFYSSYDKPDGSELSARTDQHKVYF 212 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TT-TEEEEEESSCCC-------CCCCEEEE
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CC-CEEEEEEecCcccccccccCCCcEEEE
Confidence 356778877743 33357999999999876543222223578899 88 6666666553 4999
Q ss_pred EecCCccc--ceee--cc-CCcCeEEEEEcCCCCCeEEEe-c---CCCcEEEEecCCCc-eeeEeecCCCceeEEEEcCC
Q psy11351 64 FDTRSREE--ATEL--AV-NSGPFHAVMFNPVEARLVATA-N---SKDGIALYDTRKPK-EVLMQYGSCESCMSIRFNKA 133 (224)
Q Consensus 64 wd~~~~~~--~~~~--~~-~~~~i~~~~~~~~~~~~l~~~-~---~dg~v~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~ 133 (224)
|++.++.. ...+ .. +......+.|+| ++++++.. + ....+.++|+.++. ....+..+....... ++++
T Consensus 213 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~ 290 (693)
T 3iuj_A 213 HRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNK 290 (693)
T ss_dssp EETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEE
T ss_pred EECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Eecc
Confidence 99987653 2222 23 344578899999 77766433 2 23579999998764 345555555555554 6677
Q ss_pred CCeEeeeec-C---CCcEEEECCCCCc--ceec-ccCCcccceeeeEEEEeCCCCeEEEEc-CCCC--eEEEEeCCCCC
Q psy11351 134 GTQLLGLRR-R---LPPVLYNTRSSSP--VAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSG-SDDF--VLYMWRVPRDD 202 (224)
Q Consensus 134 ~~~l~~~~~-d---~~v~v~d~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~-~~d~--~v~iw~~~~~~ 202 (224)
|..|+..+. + +.|..+|+.++.. ...+ .+...+. .|++ +++.|+.. ..++ .|++|++..+.
T Consensus 291 g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-------~~s~-~g~~lv~~~~~~g~~~l~~~d~~g~~ 361 (693)
T 3iuj_A 291 GSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-------TVHS-GSGYLFAEYMVDATARVEQFDYEGKR 361 (693)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-------EEEE-ETTEEEEEEEETTEEEEEEECTTSCE
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-------EEEE-ECCEEEEEEEECCeeEEEEEECCCCe
Confidence 666555443 2 5688889987654 2333 3433321 4444 45555544 4454 78899987554
No 219
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.30 E-value=4.5e-10 Score=93.32 Aligned_cols=190 Identities=9% Similarity=-0.034 Sum_probs=117.9
Q ss_pred CCCcceEEEEEeCCCc--------------EEEEeCCCCce--eeEEe---ccCCeeEEEEcCCCCcEEEEecCC-----
Q psy11351 3 SGDPIKVLRVIGNDDH--------------VISHDMASGDP--IDFYL---HERPVYGLSVDPSQDAIFASACDD----- 58 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~--------------i~iwd~~~~~~--~~~~~---~~~~v~~~~~~~~~~~~l~s~~~d----- 58 (224)
.+++ +.|+.++.|+. |++|++.+++. ...+. +...+..+.|+|+| ++|+..+.+
T Consensus 216 wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~ 293 (741)
T 1yr2_A 216 WLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDG-RWVVITSSEGTDPV 293 (741)
T ss_dssp ESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECTTCSC
T ss_pred EECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCC-CEEEEEEEccCCCc
Confidence 3455 67777766554 89999987763 23332 33358899999999 666655543
Q ss_pred CEEEEEecCCc--ccceeeccCCcCeEEEEEcCCCCCeEEEecC----CCcEEEEecCCC-ceeeEee-cCCCceeEEEE
Q psy11351 59 GRVLLFDTRSR--EEATELAVNSGPFHAVMFNPVEARLVATANS----KDGIALYDTRKP-KEVLMQY-GSCESCMSIRF 130 (224)
Q Consensus 59 ~~i~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~----dg~v~i~d~~~~-~~~~~~~-~~~~~v~~~~~ 130 (224)
..|.+||+.++ +....+..+........+ | ++..|+..+. ++.|.+||+.++ .....+. .+...+..+.+
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~-~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~ 371 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALIPDLKAQWDFVD-G-VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGI 371 (741)
T ss_dssp CEEEEEEEETTEECCCEEEECSSSSCEEEEE-E-ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEE
T ss_pred ceEEEEECCCCCCcccEEecCCCCceEEEEe-c-cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEE
Confidence 48999999876 314555555544555433 6 5566655544 345999999875 2333443 34455667777
Q ss_pred cCCCCeEeeeecCCCcEEEECC-CCCcceeccc--CCcccceeeeEEEEeCCCCeEEE----EcCCCCeEEEEeCCCCCe
Q psy11351 131 NKAGTQLLGLRRRLPPVLYNTR-SSSPVAQFDH--EGYYNSCTMKSCCFAGTQDEYVV----SGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 131 ~~~~~~l~~~~~d~~v~v~d~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~----s~~~d~~v~iw~~~~~~~ 203 (224)
+ ++..+++...|+..++|.+. +++....+.. .+.+ ..+.++| +++.++ +....+.|++||+.+++.
T Consensus 372 ~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v-----~~~~~s~-d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 372 A-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSA-----SGLSGRP-GDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp E-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEE-----EEEECCB-TCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred E-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEE-----EEeecCC-CCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 7 55677777788876666543 3444444432 2322 3355666 455444 334568999999988764
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.30 E-value=5.5e-10 Score=84.92 Aligned_cols=190 Identities=9% Similarity=-0.063 Sum_probs=126.7
Q ss_pred cceEEEEEeCCC----cEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEec----------CCCEEEEEecCCccc
Q psy11351 6 PIKVLRVIGNDD----HVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASAC----------DDGRVLLFDTRSREE 71 (224)
Q Consensus 6 ~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~d~~i~iwd~~~~~~ 71 (224)
+...+++...++ +|.++|..+++.+..+.-...- .+.++|++ +.++.+. .++.|.+||..+++.
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg-~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSG-SDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTS-SCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCC-CEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 345666666566 8889999999999888322222 79999999 5555553 478999999999998
Q ss_pred ceeeccCC-------cCeEEEEEcCCCCCeEEEecC--CCcEEE--EecCCCcee-------------------------
Q psy11351 72 ATELAVNS-------GPFHAVMFNPVEARLVATANS--KDGIAL--YDTRKPKEV------------------------- 115 (224)
Q Consensus 72 ~~~~~~~~-------~~i~~~~~~~~~~~~l~~~~~--dg~v~i--~d~~~~~~~------------------------- 115 (224)
+..+.... ..-..++++| ++++++.+.. +..+.+ +|+.+-..+
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~ 187 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASL 187 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSC
T ss_pred EEEEECCCccccccCCCcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCE
Confidence 88875431 2345789999 7777777654 356777 777430000
Q ss_pred ---------------e-------------------------------Eee--cCC---------------------Ccee
Q psy11351 116 ---------------L-------------------------------MQY--GSC---------------------ESCM 126 (224)
Q Consensus 116 ---------------~-------------------------------~~~--~~~---------------------~~v~ 126 (224)
. .+. ... ....
T Consensus 188 ~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 267 (368)
T 1mda_H 188 AASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQ 267 (368)
T ss_dssp EEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSS
T ss_pred EEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcce
Confidence 0 000 000 0001
Q ss_pred EEEEcCCCCeEeeeec---------CCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCe-EEEEcC-CCCeEEE
Q psy11351 127 SIRFNKAGTQLLGLRR---------RLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE-YVVSGS-DDFVLYM 195 (224)
Q Consensus 127 ~~~~~~~~~~l~~~~~---------d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~-~d~~v~i 195 (224)
.++++|+++.++++.. ++.+.++|+.+.+.+..+........ +.|+| +++ ++++.. .++.|.+
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~g-----i~~s~-Dg~~l~va~~~~~~~VsV 341 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDA-----IIAAQ-DGASDNYANSAGTEVLDI 341 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECE-----EEECC-SSSCEEEEEETTTTEEEE
T ss_pred eeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcce-----EEECC-CCCEEEEEccCCCCeEEE
Confidence 1678889888876543 23466999999988888743333343 56666 565 667776 5999999
Q ss_pred EeCCCCCeE
Q psy11351 196 WRVPRDDIY 204 (224)
Q Consensus 196 w~~~~~~~~ 204 (224)
+|+.+++..
T Consensus 342 ID~~t~kvv 350 (368)
T 1mda_H 342 YDAASDQDQ 350 (368)
T ss_dssp EESSSCEEE
T ss_pred EECCCCcEE
Confidence 999999876
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.28 E-value=6e-10 Score=82.80 Aligned_cols=185 Identities=9% Similarity=0.039 Sum_probs=118.2
Q ss_pred CCcce-EEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec---cC-
Q psy11351 4 GDPIK-VLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA---VN- 78 (224)
Q Consensus 4 ~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~- 78 (224)
...++ ++++...++.|..|+. +++......+...+..++++++| +++++...++.|.+|+.. ++...... ..
T Consensus 53 ~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~ 129 (305)
T 3dr2_A 53 WEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKR 129 (305)
T ss_dssp EGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECEETTEE
T ss_pred eCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCC-CEEEEECCCCEEEEECCC-CCEEEEEeccCCCc
Confidence 34455 6777778899999998 45543333566789999999998 677776667899999975 54221111 11
Q ss_pred CcCeEEEEEcCCCCCeEEE----ecC-------------CCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeee
Q psy11351 79 SGPFHAVMFNPVEARLVAT----ANS-------------KDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLR 141 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~----~~~-------------dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 141 (224)
...+..++++| +++++++ |.. .+.|..||..+++.... . .......++|+|+++.|+.+.
T Consensus 130 ~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~-~-~~~~p~gl~~spdg~~lyv~~ 206 (305)
T 3dr2_A 130 LNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM-A-DLDHPNGLAFSPDEQTLYVSQ 206 (305)
T ss_dssp CSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE-E-EESSEEEEEECTTSSEEEEEE
T ss_pred cCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE-e-cCCCCcceEEcCCCCEEEEEe
Confidence 12467899999 8888886 432 25677888765543322 2 334567899999999888776
Q ss_pred cC------CCcEEEECCCCCcc--eec-c-cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 142 RR------LPPVLYNTRSSSPV--AQF-D-HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 142 ~d------~~v~v~d~~~~~~~--~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.. +.|++|++..+... ..+ . ..+.... +++.+ ++++.++ +.+ .|.+|+.. ++.
T Consensus 207 ~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg-----i~~d~-~G~lwv~-~~~-gv~~~~~~-g~~ 269 (305)
T 3dr2_A 207 TPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG-----FCVDR-GGWLWSS-SGT-GVCVFDSD-GQL 269 (305)
T ss_dssp CCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS-----EEECT-TSCEEEC-CSS-EEEEECTT-SCE
T ss_pred cCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe-----EEECC-CCCEEEe-cCC-cEEEECCC-CCE
Confidence 54 67999998754311 111 1 1222233 44555 6775444 444 49999984 443
No 222
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.27 E-value=1e-09 Score=78.73 Aligned_cols=175 Identities=7% Similarity=0.074 Sum_probs=121.6
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeE--EEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeE
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYG--LSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFH 83 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~--~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~ 83 (224)
.+.++.+.+.+|.|+++|+++++.+... -...... +++. +..+......++.+.+||..+.+.+.++...... .
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG-w 139 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG-W 139 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEEECSSCC-C
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEEeCCCce-e
Confidence 3567888889999999999999988776 4445444 5554 4367777778999999999999988888643222 3
Q ss_pred EEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec--CC---CceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcce
Q psy11351 84 AVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG--SC---ESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVA 158 (224)
Q Consensus 84 ~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~ 158 (224)
.++ + ++..|+.+..++.|.++|..+.+....+.- +. ..+..+.|. +|+..+..-.++.|.+.|..+++.+.
T Consensus 140 GLt--~-Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 140 GLC--Y-WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp CEE--E-ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEE
T ss_pred EEe--c-CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEE
Confidence 444 3 445566656688999999999877666552 22 234567776 66555444467789999999999888
Q ss_pred ecccCC---------cccceeeeEEEEeCCCCeEEEEcC
Q psy11351 159 QFDHEG---------YYNSCTMKSCCFAGTQDEYVVSGS 188 (224)
Q Consensus 159 ~~~~~~---------~~~~~~~~~~~~~~~~~~~l~s~~ 188 (224)
.+...+ .-..-...-++|.|....+++||-
T Consensus 216 ~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 216 VIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 774221 001123556888886677777764
No 223
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.26 E-value=5.2e-10 Score=85.14 Aligned_cols=193 Identities=12% Similarity=0.082 Sum_probs=126.3
Q ss_pred CCCCcceEEEEEeC--CCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCC-ccccee----
Q psy11351 2 ASGDPIKVLRVIGN--DDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRS-REEATE---- 74 (224)
Q Consensus 2 a~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~---- 74 (224)
+++.+|+++..+.. ++.|.++|+.+++.+..+.-.+. ..+.|.+...+++.+.||++.+.++.+ ++....
T Consensus 143 a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~ 219 (386)
T 3sjl_D 143 SLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEV 219 (386)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCC
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc---ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecce
Confidence 56778888887764 68999999999999888743331 223355546777888899999999876 443221
Q ss_pred eccCCcCeE-EEEEcCCCCCeEEEecCCCcEEEEecCCCce--eeEee--c--------CCCceeEEEEcCCCCeEeeee
Q psy11351 75 LAVNSGPFH-AVMFNPVEARLVATANSKDGIALYDTRKPKE--VLMQY--G--------SCESCMSIRFNKAGTQLLGLR 141 (224)
Q Consensus 75 ~~~~~~~i~-~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~--~~~~~--~--------~~~~v~~~~~~~~~~~l~~~~ 141 (224)
+.....++. ...|.+.++++++ .+.+|.|.+.|+..... ...+. . .......++++++++.+++..
T Consensus 220 ~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~ 298 (386)
T 3sjl_D 220 FHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLV 298 (386)
T ss_dssp CSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred eccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEe
Confidence 111112222 2355432665555 44579999999976532 11111 0 122334578899999888864
Q ss_pred c----------CCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCe-EEEE-cCCCCeEEEEeCCCCCeE
Q psy11351 142 R----------RLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE-YVVS-GSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 142 ~----------d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s-~~~d~~v~iw~~~~~~~~ 204 (224)
. .+.|.++|+.+++.+..+........ +.+++ +++ +|++ ...++.|.++|..+++..
T Consensus 299 ~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~-----lavs~-D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 299 DQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDS-----INVSQ-DEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp EECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECE-----EEECS-SSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred ccccccccCCCCCEEEEEECCCCeEEEEEECCCCcce-----EEECC-CCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 3 24699999999999988854444444 66666 554 5444 566899999999999876
No 224
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.25 E-value=3.8e-08 Score=71.56 Aligned_cols=190 Identities=9% Similarity=0.017 Sum_probs=119.1
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEEe-ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEE
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFYL-HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAV 85 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~ 85 (224)
+.++++-..++.|..++........... .......++++|++..++++-...+.|.+++...................+
T Consensus 48 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i 127 (267)
T 1npe_A 48 KVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGI 127 (267)
T ss_dssp TEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred CEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEE
Confidence 4555565667889999987665444332 225788999999764677777778899999986433222222222456899
Q ss_pred EEcCCCCCeEEEecC--CCcEEEEecCCCceeeEee-cCCCceeEEEEcCCCCeEeeee-cCCCcEEEECCCCCcceecc
Q psy11351 86 MFNPVEARLVATANS--KDGIALYDTRKPKEVLMQY-GSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNTRSSSPVAQFD 161 (224)
Q Consensus 86 ~~~~~~~~~l~~~~~--dg~v~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~~~~~~~~~~ 161 (224)
+++|.++.++++... .+.|..+++... ....+. ........++++|++..|+.+. ..+.|.++|+........+.
T Consensus 128 ~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~ 206 (267)
T 1npe_A 128 VTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE 206 (267)
T ss_dssp EEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE
T ss_pred EEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec
Confidence 999944444444433 467888887643 222222 2334678899999887776654 45679999987543322222
Q ss_pred cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 162 HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
....... ++.. ++.++++....+.|..+|..+++..
T Consensus 207 ~~~~P~g-----i~~d--~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 207 GLQYPFA-----VTSY--GKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp CCCSEEE-----EEEE--TTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCCceE-----EEEe--CCEEEEEECCCCeEEEEeCCCCCce
Confidence 1111112 2222 4566677667789999999988764
No 225
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.25 E-value=3.3e-09 Score=75.37 Aligned_cols=178 Identities=12% Similarity=0.136 Sum_probs=119.1
Q ss_pred ceEEEEEeCCC--cEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEE
Q psy11351 7 IKVLRVIGNDD--HVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHA 84 (224)
Q Consensus 7 ~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~ 84 (224)
+.++.+.+.+| .|+.+|+++++.+....-..........+.+..+....-.++.+.+||..+.+.+.++...... ..
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wg 109 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WA 109 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CE
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eE
Confidence 56677777764 8999999999998877544444433333334366777778999999999999988888643332 34
Q ss_pred EEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec--CC---CceeEEEEcCCCCeEeeeecCCCcEEEECCCCCccee
Q psy11351 85 VMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG--SC---ESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQ 159 (224)
Q Consensus 85 ~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~ 159 (224)
++ + ++..|+.+..++.|.++|..+.+....+.- +. ..+..+.+. +|+..+..-.+..|.+.|..+++.+..
T Consensus 110 lt--~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~ 185 (243)
T 3mbr_X 110 LT--S-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAW 185 (243)
T ss_dssp EE--E-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEE
T ss_pred Ee--e-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEE
Confidence 44 3 344454455688999999999877666553 22 234556665 566554444677899999999998877
Q ss_pred cccCCc---------ccceeeeEEEEeCCCCeEEEEcCC
Q psy11351 160 FDHEGY---------YNSCTMKSCCFAGTQDEYVVSGSD 189 (224)
Q Consensus 160 ~~~~~~---------~~~~~~~~~~~~~~~~~~l~s~~~ 189 (224)
+...+- ...-...-+++.|..+.+++||-.
T Consensus 186 idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 186 IDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 732211 111235668888876777777754
No 226
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.24 E-value=1.1e-09 Score=81.34 Aligned_cols=181 Identities=10% Similarity=0.075 Sum_probs=113.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEe-----ccCCeeEEEEcCCCCcEEEE----ecC-------------CC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYL-----HERPVYGLSVDPSQDAIFAS----ACD-------------DG 59 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s----~~~-------------d~ 59 (224)
+.+..|+++++...++.|.+|+.+ ++...... ....++++++.|+| +++++ |.. .+
T Consensus 92 ~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~ 169 (305)
T 3dr2_A 92 AVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHH 169 (305)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCE
T ss_pred eECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCC
Confidence 345667766665566789999986 55443331 12457789999998 77776 332 35
Q ss_pred EEEEEecCCcccceeeccCCcCeEEEEEcCCCCCeEEEecCC------CcEEEEecCCCce--eeEee-cCCCceeEEEE
Q psy11351 60 RVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSK------DGIALYDTRKPKE--VLMQY-GSCESCMSIRF 130 (224)
Q Consensus 60 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------g~v~i~d~~~~~~--~~~~~-~~~~~v~~~~~ 130 (224)
.|..+|..+++..... .......++|+| +++.|+.+... +.|.+||+..... ...+. ........+++
T Consensus 170 ~v~~~d~~~g~~~~~~--~~~~p~gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~ 246 (305)
T 3dr2_A 170 SVYRLPPDGSPLQRMA--DLDHPNGLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCV 246 (305)
T ss_dssp EEEEECSSSCCCEEEE--EESSEEEEEECT-TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEE
T ss_pred eEEEEcCCCCcEEEEe--cCCCCcceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEE
Confidence 7888887666643332 334568899999 77766665544 6899999875431 11111 12344567899
Q ss_pred cCCCCeEeeeecCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEe
Q psy11351 131 NKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWR 197 (224)
Q Consensus 131 ~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~ 197 (224)
+++|++.++ ..++ |.+|+. .++.+..+.....+ ..++|.| +++.|..++.++ ++.++
T Consensus 247 d~~G~lwv~-~~~g-v~~~~~-~g~~~~~~~~~~~~-----~~~~f~~-d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 247 DRGGWLWSS-SGTG-VCVFDS-DGQLLGHIPTPGTA-----SNCTFDQ-AQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp CTTSCEEEC-CSSE-EEEECT-TSCEEEEEECSSCC-----CEEEECT-TSCEEEEEETTE-EEEEE
T ss_pred CCCCCEEEe-cCCc-EEEECC-CCCEEEEEECCCce-----eEEEEeC-CCCEEEEEcCCe-EEEEE
Confidence 999995544 4454 999998 46666666433333 3367776 566666555554 44443
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.24 E-value=3.2e-10 Score=85.72 Aligned_cols=191 Identities=12% Similarity=0.054 Sum_probs=120.0
Q ss_pred CCCCcceEEEEEeC-----CCcEEEEeCCCCceeeEEec-------cCCeeEEEEcCCCCcEEEEec---CCCEEEEEec
Q psy11351 2 ASGDPIKVLRVIGN-----DDHVISHDMASGDPIDFYLH-------ERPVYGLSVDPSQDAIFASAC---DDGRVLLFDT 66 (224)
Q Consensus 2 a~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~---~d~~i~iwd~ 66 (224)
+++..++++++-.. ++.|.+||+++++.+..+.. ...+..++++|++...+++-. .++.|.+||.
T Consensus 73 ~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~ 152 (343)
T 2qe8_A 73 KSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDL 152 (343)
T ss_dssp EECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEET
T ss_pred EEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEEC
Confidence 45566776665543 57899999999987766532 235689999986535666655 6789999999
Q ss_pred CCcccceeeccC-----------------------------CcCeEEEEEcCCCCCeEEEecCCC-cEEEEecC---CCc
Q psy11351 67 RSREEATELAVN-----------------------------SGPFHAVMFNPVEARLVATANSKD-GIALYDTR---KPK 113 (224)
Q Consensus 67 ~~~~~~~~~~~~-----------------------------~~~i~~~~~~~~~~~~l~~~~~dg-~v~i~d~~---~~~ 113 (224)
.+++....+..| ...+..++|+| +++.|+.+..++ .+..++.. .+.
T Consensus 153 ~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~ 231 (343)
T 2qe8_A 153 QTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQ 231 (343)
T ss_dssp TTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCSEEEEEEHHHHTCTT
T ss_pred CCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCC
Confidence 877654433221 12368899999 777777665554 55555432 110
Q ss_pred ----e---eeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEE
Q psy11351 114 ----E---VLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVS 186 (224)
Q Consensus 114 ----~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 186 (224)
. .....++......++++++|+++++...++.|.+||..+++........ .. .....+++.+ ++.++++
T Consensus 232 ~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~-~~--~~p~~va~~~-~g~l~v~ 307 (343)
T 2qe8_A 232 LTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE-KL--SWTDSFNFGS-DGYLYFD 307 (343)
T ss_dssp CCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG-GG--SCEEEEEECT-TSCEEEE
T ss_pred CChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC-ce--ecCCeeEECC-CCcEEEE
Confidence 0 0011223345677999999998888888899999998556532222211 11 1133467777 5777777
Q ss_pred cCCCCeEEEEe
Q psy11351 187 GSDDFVLYMWR 197 (224)
Q Consensus 187 ~~~d~~v~iw~ 197 (224)
.+..+.+.+|.
T Consensus 308 ~~~~~~~~~f~ 318 (343)
T 2qe8_A 308 CNQLHHSAPLN 318 (343)
T ss_dssp ECCGGGSGGGB
T ss_pred eCccccccccc
Confidence 76555554443
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.21 E-value=3.2e-09 Score=79.68 Aligned_cols=174 Identities=13% Similarity=0.095 Sum_probs=107.4
Q ss_pred CCcceEEEEEeCCCcEEEEeCCCCceeeEEec-----cCCeeEEEEcCCCCcEEEEecC------CCEEEEEecCCcccc
Q psy11351 4 GDPIKVLRVIGNDDHVISHDMASGDPIDFYLH-----ERPVYGLSVDPSQDAIFASACD------DGRVLLFDTRSREEA 72 (224)
Q Consensus 4 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~s~~~------d~~i~iwd~~~~~~~ 72 (224)
+++++++++. .+ .|.+||..+++....... ...++++.++|+| +++++... .+.|..++ +++.
T Consensus 98 ~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~~- 171 (326)
T 2ghs_A 98 ISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGKV- 171 (326)
T ss_dssp EETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTEE-
T ss_pred eCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCcE-
Confidence 4456666654 44 499999988876544321 2358899999998 56665432 24566666 4443
Q ss_pred eeeccCCcCeEEEEEcCCCCCeE-EEecCCCcEEEEecC--CC-ce-----eeEeecCCCceeEEEEcCCCCeEeeeecC
Q psy11351 73 TELAVNSGPFHAVMFNPVEARLV-ATANSKDGIALYDTR--KP-KE-----VLMQYGSCESCMSIRFNKAGTQLLGLRRR 143 (224)
Q Consensus 73 ~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~v~i~d~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 143 (224)
..+.........++|+| +++.+ ++.+.++.|.+||+. ++ .. ...+.........++++++|++.++...+
T Consensus 172 ~~~~~~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 172 TKLFADISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp EEEEEEESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT
T ss_pred EEeeCCCcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC
Confidence 23323334567899999 66644 555667899999986 44 21 11111234567889999999877776666
Q ss_pred CCcEEEECCCCCcceecccCCcccceeeeEEEEe-CCCCe-EEEEcCCC
Q psy11351 144 LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFA-GTQDE-YVVSGSDD 190 (224)
Q Consensus 144 ~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~l~s~~~d 190 (224)
+.|.+||. +++.+..+..... ....++|. + +++ ++++...+
T Consensus 251 ~~v~~~d~-~g~~~~~i~~~~~----~~~~~af~g~-d~~~L~vt~~~~ 293 (326)
T 2ghs_A 251 GAVDRYDT-DGNHIARYEVPGK----QTTCPAFIGP-DASRLLVTSARE 293 (326)
T ss_dssp TEEEEECT-TCCEEEEEECSCS----BEEEEEEEST-TSCEEEEEEBCT
T ss_pred CEEEEECC-CCCEEEEEECCCC----CcEEEEEecC-CCCEEEEEecCC
Confidence 78999998 5666655532221 13447776 5 444 44544444
No 229
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.21 E-value=3.2e-08 Score=75.64 Aligned_cols=175 Identities=9% Similarity=-0.088 Sum_probs=112.5
Q ss_pred cEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEec----------CCCEEEEEecCCcccceeeccC-------Cc
Q psy11351 18 HVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASAC----------DDGRVLLFDTRSREEATELAVN-------SG 80 (224)
Q Consensus 18 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~-------~~ 80 (224)
+|.++|..+++.+..+.-...- .++++|++ ++++.+. .++.|.+||..+.+.+..+... ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg-~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSG-SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCC-CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 8899999999988777333333 99999999 6666664 3678999999988776655322 12
Q ss_pred CeEEEEEcCCCCCeEEEecC--CCcEEEEecCCCceeeE-eecCCCceeEEEEcCCC-CeEeeeecCCCcEEEECCCCCc
Q psy11351 81 PFHAVMFNPVEARLVATANS--KDGIALYDTRKPKEVLM-QYGSCESCMSIRFNKAG-TQLLGLRRRLPPVLYNTRSSSP 156 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~--dg~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~v~d~~~~~~ 156 (224)
.-..+.|+| ++++|+.+.. ++.|.++| .+++.... +. ... ++.+.|++ +.+++.+.|+.+.++|. +++.
T Consensus 126 ~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~ 198 (373)
T 2mad_H 126 YSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGA 198 (373)
T ss_pred CccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcE
Confidence 245789999 8888887764 57899999 88876555 32 222 24555665 34556678899999999 7766
Q ss_pred ceeccc-CCcccc-eeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 157 VAQFDH-EGYYNS-CTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 157 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
...... ...+.. -.+....+.+.++.+++.. .++.+.+.|+.++.
T Consensus 199 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~ 245 (373)
T 2mad_H 199 AGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAG 245 (373)
T ss_pred EEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCc
Confidence 533210 000000 0011133444334444443 67889999987653
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.18 E-value=1.4e-08 Score=77.56 Aligned_cols=186 Identities=10% Similarity=-0.078 Sum_probs=116.1
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEEec----------cCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFYLH----------ERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA 76 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 76 (224)
+..+..++.++.|..+|.++++.+..+.. ...+.+.-.. ++ ..++.++.++.|..+|.++++.+....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SG-GHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ET-TEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eC-CEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 45677888899999999999998766632 2223222222 23 467778889999999999999876665
Q ss_pred cCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCce-----eEEEEcCCCCeEeeeecCCCcEEEEC
Q psy11351 77 VNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESC-----MSIRFNKAGTQLLGLRRRLPPVLYNT 151 (224)
Q Consensus 77 ~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~d~~v~v~d~ 151 (224)
............ +..++.++.++.+..+|.++++............ ...... +..++++..++.+..+|.
T Consensus 131 ~~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 131 VAGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp CSSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEET
T ss_pred CCCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEEC
Confidence 433221122222 3467777889999999999997766654322111 111222 456777888889999999
Q ss_pred CCCCcceecccCCccc--------ceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 152 RSSSPVAQFDHEGYYN--------SCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 152 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.+++.+.......... .+...++ . .+..++.++.++.+..+|..+++.
T Consensus 206 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~-~---~~~~v~~~~~~g~l~~~d~~tG~~ 261 (376)
T 3q7m_A 206 EQGQMIWQQRISQATGSTEIDRLSDVDTTPV-V---VNGVVFALAYNGNLTALDLRSGQI 261 (376)
T ss_dssp TTCCEEEEEECCC-----------CCCCCCE-E---ETTEEEEECTTSCEEEEETTTCCE
T ss_pred CCCcEEEEEecccCCCCcccccccccCCCcE-E---ECCEEEEEecCcEEEEEECCCCcE
Confidence 9998876663221100 0001111 1 234455556677888888877765
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.16 E-value=4e-12 Score=97.14 Aligned_cols=141 Identities=8% Similarity=0.021 Sum_probs=80.2
Q ss_pred cEEEEecCCCEEEEEecCCcccceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCC-cee-E
Q psy11351 50 AIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCE-SCM-S 127 (224)
Q Consensus 50 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~-~v~-~ 127 (224)
..+++++.|+.|+.||..+++.+..+.. +.+.+..+.. ++..+++++.||.|+.||.++++.......+.. .+. +
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 6888999999999999999998888765 4455555555 667888888999999999988866544432211 110 0
Q ss_pred EEEcCCCCeEeeeecCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 128 IRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 128 ~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
..+. .+..+++++.++.++.||.++|+.+..+..... ..++| ++..+++++.|+.|+.||..+++.
T Consensus 87 p~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~--------~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 87 PCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA--------DSLSP-STSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp SCC------CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSSC
T ss_pred ceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc--------ccccc-cCCEEEEEecCCEEEEEECCCCCE
Confidence 0111 345778888899999999999998877743221 12334 577888888999999999999876
No 232
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.15 E-value=6.1e-09 Score=85.94 Aligned_cols=189 Identities=10% Similarity=0.045 Sum_probs=118.0
Q ss_pred cceEEEEEeCCC-------------cEEEEeCCCCce--eeEE---e-ccCCeeEEEEcCCCCcEEEEec---CCCEEEE
Q psy11351 6 PIKVLRVIGNDD-------------HVISHDMASGDP--IDFY---L-HERPVYGLSVDPSQDAIFASAC---DDGRVLL 63 (224)
Q Consensus 6 ~~~~l~~~~~dg-------------~i~iwd~~~~~~--~~~~---~-~~~~v~~~~~~~~~~~~l~s~~---~d~~i~i 63 (224)
+++.|+.++.+. .|++|++.+... ...+ . |......+.|+|++..++++.+ .+..|.+
T Consensus 184 Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~ 263 (693)
T 3iuj_A 184 GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYV 263 (693)
T ss_dssp TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEE
T ss_pred CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEE
Confidence 567777777664 399999987653 3333 2 3446788999999944444443 2358999
Q ss_pred EecCCcc-cceeeccCCcCeEEEEEcCCCCCeEEEecCC---CcEEEEecCCCce--eeEeecCCCceeEEEEcCCCCeE
Q psy11351 64 FDTRSRE-EATELAVNSGPFHAVMFNPVEARLVATANSK---DGIALYDTRKPKE--VLMQYGSCESCMSIRFNKAGTQL 137 (224)
Q Consensus 64 wd~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---g~v~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l 137 (224)
+|+.+++ ....+..+....... +++.++.+++.+..+ +.|..+|+.++.. ...+..+...+. .|+++++.|
T Consensus 264 ~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~l 340 (693)
T 3iuj_A 264 KDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYL 340 (693)
T ss_dssp EETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEE
T ss_pred EECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEE
Confidence 9998764 345555555555554 455355666665543 5789999987643 244555655554 899999988
Q ss_pred eeeecCC---CcEEEECCCCCcceecc--cCCcccceeeeEEEEeCCCCeEEEEcCC---CCeEEEEeCCCCCe
Q psy11351 138 LGLRRRL---PPVLYNTRSSSPVAQFD--HEGYYNSCTMKSCCFAGTQDEYVVSGSD---DFVLYMWRVPRDDI 203 (224)
Q Consensus 138 ~~~~~d~---~v~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~s~~~---d~~v~iw~~~~~~~ 203 (224)
+....++ .|++|++..+ ....+. ..+.+. .+.+++++..++++.+. -+.++.||+.+++.
T Consensus 341 v~~~~~~g~~~l~~~d~~g~-~~~~l~~p~~~~~~-----~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 341 FAEYMVDATARVEQFDYEGK-RVREVALPGLGSVS-----GFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEEEETTEEEEEEECTTSC-EEEEECCSSSSEEE-----ECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEEEEECCeeEEEEEECCCC-eeEEeecCCCceEE-----eeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 8776544 5889988744 333432 222222 23445533344443332 37899999987764
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.13 E-value=1.8e-07 Score=68.04 Aligned_cols=190 Identities=7% Similarity=0.030 Sum_probs=120.1
Q ss_pred ceEEEEEeCCCcEEEEeCCCCcee-----eEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCc
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPI-----DFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSG 80 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~-----~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 80 (224)
|.+|+.+.. +.|+.++++..... ..+ .....+..++|++++..++++-..++.|..++.........+.....
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence 345555553 48999998765432 122 22346789999997646777777789999999876543333322224
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec-CCCceeEEEEcCCCCeEeeeec---CCCcEEEECCCCCc
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG-SCESCMSIRFNKAGTQLLGLRR---RLPPVLYNTRSSSP 156 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---d~~v~v~d~~~~~~ 156 (224)
....+++++.++.++++-...+.|.++++..... ..+.. .......++++|++..|+.+.. .+.|..+++... .
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~ 157 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-N 157 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-C
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-C
Confidence 6789999984456666666778899999874322 22222 2246789999997776666553 356778887643 2
Q ss_pred ceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 157 VAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
...+... ... ....++++|..+.++++-...+.|..+|.....
T Consensus 158 ~~~~~~~-~~~--~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 158 RRILAQD-NLG--LPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp CEEEECT-TCS--CEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred cEEEEEC-CCC--CCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence 2222111 111 123467777445666777778899999987543
No 234
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.10 E-value=5.4e-08 Score=74.27 Aligned_cols=183 Identities=10% Similarity=0.028 Sum_probs=117.0
Q ss_pred eEEEEEeCCCcEEEEeCCCCceeeEEeccCCee------EEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcC
Q psy11351 8 KVLRVIGNDDHVISHDMASGDPIDFYLHERPVY------GLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP 81 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~------~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 81 (224)
..++.++.++.|..+|..+++.+..+.....+. ..... + ..++.+..++.+..+|.++++.+.........
T Consensus 144 ~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~-~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~ 220 (376)
T 3q7m_A 144 GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--F-GAAVVGGDNGRVSAVLMEQGQMIWQQRISQAT 220 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--T-TEEEECCTTTEEEEEETTTCCEEEEEECCC--
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--C-CEEEEEcCCCEEEEEECCCCcEEEEEecccCC
Confidence 357777888889999998888776664332221 12222 2 46777888999999999999877665422100
Q ss_pred ----eEE---EEEcC-CCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCC
Q psy11351 82 ----FHA---VMFNP-VEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 82 ----i~~---~~~~~-~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~ 153 (224)
+.. +...| ..+..++.++.++.+..+|.++++....... .....+.. ++..+++++.++.+..+|..+
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 221 GSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDG 296 (376)
T ss_dssp ---------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTT
T ss_pred CCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCC
Confidence 000 00011 0235666777899999999999876654432 22333433 467788888899999999999
Q ss_pred CCcceecc-cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 154 SSPVAQFD-HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 154 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
++.+.... ........ ... .+..|+.++.+|.|+.+|..+++..
T Consensus 297 G~~~w~~~~~~~~~~~~----~~~---~~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 297 GVTLWTQSDLLHRLLTS----PVL---YNGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp CCEEEEECTTTTSCCCC----CEE---ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcEEEeecccCCCcccC----CEE---ECCEEEEEeCCCeEEEEECCCCcEE
Confidence 98876653 22211111 111 2456777888999999999999874
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.09 E-value=1.2e-08 Score=76.26 Aligned_cols=177 Identities=13% Similarity=0.068 Sum_probs=117.9
Q ss_pred eEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEEE
Q psy11351 8 KVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVM 86 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~ 86 (224)
..+..++.++.+..+|.+ ++..... .....+.++...+++ . +..++.++.|..+|.. ++....+......+.++.
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 456777888999999998 7665555 344456677777776 4 5567778999999998 776666655555667777
Q ss_pred EcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecccCCc-
Q psy11351 87 FNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGY- 165 (224)
Q Consensus 87 ~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~- 165 (224)
..+ ++.+++.. +.+..+| .+++...........+.++...++|. +..++.++.+..+|. +++.+..+.....
T Consensus 184 ~d~-~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~ 256 (330)
T 3hxj_A 184 IGK-DGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRI 256 (330)
T ss_dssp ECT-TCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCC
T ss_pred EcC-CCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCc
Confidence 766 55555444 7899999 66666555555556678888888765 455566777888874 5555555532222
Q ss_pred ccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 166 YNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
... .... .+..|..++.++.|..+|. +++.
T Consensus 257 ~~~-----~~~~--~~g~l~v~t~~ggl~~~d~-~g~~ 286 (330)
T 3hxj_A 257 ESS-----PVIG--NTDTIYFGSYDGHLYAINP-DGTE 286 (330)
T ss_dssp CSC-----CEEC--TTSCEEEECTTCEEEEECT-TSCE
T ss_pred ccc-----ceEc--CCCeEEEecCCCCEEEECC-CCcE
Confidence 222 1222 2445667778888999996 5554
No 236
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.08 E-value=3.4e-08 Score=81.13 Aligned_cols=181 Identities=11% Similarity=0.094 Sum_probs=121.4
Q ss_pred CCcEEEEeCCCCceeeEEecc--------------------------------CCeeEEEEcCCCCcEEEEecCCC----
Q psy11351 16 DDHVISHDMASGDPIDFYLHE--------------------------------RPVYGLSVDPSQDAIFASACDDG---- 59 (224)
Q Consensus 16 dg~i~iwd~~~~~~~~~~~~~--------------------------------~~v~~~~~~~~~~~~l~s~~~d~---- 59 (224)
+|.|..+|.++++.+..+... .....+++.|+. .+++.+..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~-~~vy~~~~~g~~w~ 255 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL-DLLYVGTGNGSPWN 255 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC-CEEEEeCCCCCccc
Confidence 589999999999988766210 011246788877 6777777766
Q ss_pred ---------------EEEEEecCCcccceeecc--CC-------cCeEEEEEcCCCCC---eEEEecCCCcEEEEecCCC
Q psy11351 60 ---------------RVLLFDTRSREEATELAV--NS-------GPFHAVMFNPVEAR---LVATANSKDGIALYDTRKP 112 (224)
Q Consensus 60 ---------------~i~iwd~~~~~~~~~~~~--~~-------~~i~~~~~~~~~~~---~l~~~~~dg~v~i~d~~~~ 112 (224)
.|..+|.++++.+..++. |. .+.....+.. +++ .++.++.+|.++++|.+++
T Consensus 256 ~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG 334 (668)
T 1kv9_A 256 REVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI-DGKPRKVLMQAPKNGFFYVLDRTNG 334 (668)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTC
T ss_pred cCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc-CCcEEEEEEEECCCCEEEEEECCCC
Confidence 499999999998877653 22 2222222222 333 6888999999999999998
Q ss_pred ceeeEeecCC------------Cc------------------------eeEEEEcCCCCeEeee----------------
Q psy11351 113 KEVLMQYGSC------------ES------------------------CMSIRFNKAGTQLLGL---------------- 140 (224)
Q Consensus 113 ~~~~~~~~~~------------~~------------------------v~~~~~~~~~~~l~~~---------------- 140 (224)
+.+....... .+ -..++++|+...+++.
T Consensus 335 ~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~ 414 (668)
T 1kv9_A 335 KLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFV 414 (668)
T ss_dssp CEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCC
T ss_pred CEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccc
Confidence 7663322100 00 0126777776655431
Q ss_pred --------------------ecCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCC
Q psy11351 141 --------------------RRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 141 --------------------~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~ 200 (224)
..++.|+.||+.+++.+.+...........+.. .+.+++.++.|+.++.||.++
T Consensus 415 ~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t------~gg~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 415 TRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLST------AGNLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp CCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE------TTTEEEEECTTSEEEEEETTT
T ss_pred cccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEe------CCCEEEEECCcccchhhhhhc
Confidence 123679999999999887775444433333333 577888889999999999999
Q ss_pred CCeE
Q psy11351 201 DDIY 204 (224)
Q Consensus 201 ~~~~ 204 (224)
++..
T Consensus 489 G~~l 492 (668)
T 1kv9_A 489 GEAL 492 (668)
T ss_dssp CCEE
T ss_pred Chhh
Confidence 9885
No 237
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.08 E-value=3.5e-08 Score=70.80 Aligned_cols=163 Identities=10% Similarity=-0.009 Sum_probs=115.3
Q ss_pred eeeEEeccCC--eeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeE--EEEEcCCCCCeEEEecCCCcE
Q psy11351 29 PIDFYLHERP--VYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFH--AVMFNPVEARLVATANSKDGI 104 (224)
Q Consensus 29 ~~~~~~~~~~--v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~l~~~~~dg~v 104 (224)
.+..+.|... ...+.|+. + .++.+.+.+|.|+.+|+++++.+..+ .. .... .+++. +++++...-.++.+
T Consensus 45 Vv~~~phd~~~ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~--g~~Ly~ltw~~~~v 118 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASD--GERLYQLTWTEGLL 118 (268)
T ss_dssp EEEEEECCTTCCEEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEEC--SSCEEEEESSSCEE
T ss_pred EEEEEcCCCccccceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEe--CCEEEEEEccCCEE
Confidence 4455566544 47888874 3 78889999999999999999987776 32 2333 35554 34666666678999
Q ss_pred EEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecc---cCCcccceeeeEEEEeCCCC
Q psy11351 105 ALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFD---HEGYYNSCTMKSCCFAGTQD 181 (224)
Q Consensus 105 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 181 (224)
.+||..+.+.+..+.-.. .-..++ ++++.|+.+..++.|+++|..+.+.+..+. ....+.. ...+.|. ++
T Consensus 119 ~V~D~~Tl~~~~ti~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~--lNeLe~~--dG 191 (268)
T 3nok_A 119 FTWSGMPPQRERTTRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVEL--INELECA--NG 191 (268)
T ss_dssp EEEETTTTEEEEEEECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC--EEEEEEE--TT
T ss_pred EEEECCcCcEEEEEeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCccccc--ccccEEe--CC
Confidence 999999998877776422 223344 567888887778899999999998887773 2222222 2334554 67
Q ss_pred eEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 182 EYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 182 ~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
..++..-.+..|.+.|..+++..
T Consensus 192 ~lyanvw~s~~I~vIDp~TG~V~ 214 (268)
T 3nok_A 192 VIYANIWHSSDVLEIDPATGTVV 214 (268)
T ss_dssp EEEEEETTCSEEEEECTTTCBEE
T ss_pred EEEEEECCCCeEEEEeCCCCcEE
Confidence 77777667889999999999874
No 238
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.07 E-value=6.5e-08 Score=77.98 Aligned_cols=180 Identities=7% Similarity=-0.091 Sum_probs=118.2
Q ss_pred CCcEEEEeCCCCceeeEEeccCCe---------------------------------------eEEEEcCCCCcEEEEec
Q psy11351 16 DDHVISHDMASGDPIDFYLHERPV---------------------------------------YGLSVDPSQDAIFASAC 56 (224)
Q Consensus 16 dg~i~iwd~~~~~~~~~~~~~~~v---------------------------------------~~~~~~~~~~~~l~s~~ 56 (224)
++.|..+|.++++.+..+...... ..+++.+.. ..++.+.
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~-g~vy~~~ 253 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKL-NLFYYGS 253 (571)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEEEC
T ss_pred CCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCC-CeEEEEC
Confidence 789999999999988766321111 135566665 4555544
Q ss_pred CC----------------CEEEEEecCCcccceeeccC----------CcCeEEEEEcCCCC---CeEEEecCCCcEEEE
Q psy11351 57 DD----------------GRVLLFDTRSREEATELAVN----------SGPFHAVMFNPVEA---RLVATANSKDGIALY 107 (224)
Q Consensus 57 ~d----------------~~i~iwd~~~~~~~~~~~~~----------~~~i~~~~~~~~~~---~~l~~~~~dg~v~i~ 107 (224)
.+ +.|..+|.++++.+..++.. ..++. +.... ++ ..++.++.+|.+.++
T Consensus 254 g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~-~G~~~~~v~~~~~~G~l~~l 331 (571)
T 2ad6_A 254 GNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPV-NGKMTPLLSHIDRNGILYTL 331 (571)
T ss_dssp CCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEE-TTEEEEEEEEECTTSEEEEE
T ss_pred CCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-Eeccc-CCcEEEEEEEeCCCcEEEEE
Confidence 32 36999999999987766432 12222 22223 44 367788899999999
Q ss_pred ecCCCceeeEeecCC-------------Cce--------------------------eEEEEcCCCCeEeeee-------
Q psy11351 108 DTRKPKEVLMQYGSC-------------ESC--------------------------MSIRFNKAGTQLLGLR------- 141 (224)
Q Consensus 108 d~~~~~~~~~~~~~~-------------~~v--------------------------~~~~~~~~~~~l~~~~------- 141 (224)
|.++++.+....-.. .++ ..++++|+...+++..
T Consensus 332 D~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~ 411 (571)
T 2ad6_A 332 NRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDW 411 (571)
T ss_dssp ETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEE
T ss_pred ECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccc
Confidence 999987765543111 111 2357888777766643
Q ss_pred ------------------------------cCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCC
Q psy11351 142 ------------------------------RRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDF 191 (224)
Q Consensus 142 ------------------------------~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 191 (224)
.++.|..||+.+++.+.++..........+.. .+..++.++.|+
T Consensus 412 ~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t------~gg~v~~g~~dg 485 (571)
T 2ad6_A 412 EPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYT------KGGLVWYATLDG 485 (571)
T ss_dssp EECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEE------TTTEEEEECTTS
T ss_pred cccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEE------CCCEEEEEcCCC
Confidence 24678999999999887775444333322222 456677789999
Q ss_pred eEEEEeCCCCCeE
Q psy11351 192 VLYMWRVPRDDIY 204 (224)
Q Consensus 192 ~v~iw~~~~~~~~ 204 (224)
.|+.||.+++++.
T Consensus 486 ~l~a~D~~tG~~l 498 (571)
T 2ad6_A 486 YLKALDNKDGKEL 498 (571)
T ss_dssp EEEEEETTTCCEE
T ss_pred eEEEEECCCCCEE
Confidence 9999999999884
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.06 E-value=1.8e-08 Score=83.05 Aligned_cols=156 Identities=10% Similarity=0.133 Sum_probs=105.8
Q ss_pred cceEEEEEeCCCc-------------------EEEEeCCCCceeeEEe---cc-------CCeeEEEEcCCCC--cEEEE
Q psy11351 6 PIKVLRVIGNDDH-------------------VISHDMASGDPIDFYL---HE-------RPVYGLSVDPSQD--AIFAS 54 (224)
Q Consensus 6 ~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~---~~-------~~v~~~~~~~~~~--~~l~s 54 (224)
.+.+++.++.++. |..+|.++++.+..+. |. .+........++. ..++.
T Consensus 245 ~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~ 324 (689)
T 1yiq_A 245 ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQ 324 (689)
T ss_dssp TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEE
Confidence 3456777777763 9999999999887662 22 1222222223441 27889
Q ss_pred ecCCCEEEEEecCCcccceeeccCC----------------------------c-----------CeEEEEEcCCCCCeE
Q psy11351 55 ACDDGRVLLFDTRSREEATELAVNS----------------------------G-----------PFHAVMFNPVEARLV 95 (224)
Q Consensus 55 ~~~d~~i~iwd~~~~~~~~~~~~~~----------------------------~-----------~i~~~~~~~~~~~~l 95 (224)
++.+|.++++|.++++.+...+... . .-..++++| +..++
T Consensus 325 ~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp-~~~~~ 403 (689)
T 1yiq_A 325 APKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP-DTGLV 403 (689)
T ss_dssp CCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET-TTTEE
T ss_pred ECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC-CCCEE
Confidence 9999999999999998763221100 0 011267888 55555
Q ss_pred EEecC---------------------------------------------CCcEEEEecCCCceeeEeecCCCceeEEEE
Q psy11351 96 ATANS---------------------------------------------KDGIALYDTRKPKEVLMQYGSCESCMSIRF 130 (224)
Q Consensus 96 ~~~~~---------------------------------------------dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~ 130 (224)
++... +|.|..||+.+++.......+. +...-.+
T Consensus 404 yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~ 482 (689)
T 1yiq_A 404 YIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTL 482 (689)
T ss_dssp EEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEE
T ss_pred EEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccc
Confidence 54421 3779999999998776665432 3333456
Q ss_pred cCCCCeEeeeecCCCcEEEECCCCCcceecccC
Q psy11351 131 NKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHE 163 (224)
Q Consensus 131 ~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~ 163 (224)
...+..++.++.|+.++.||.++|+.+.++...
T Consensus 483 ~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 483 STAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred eECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 667889999999999999999999999888533
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.06 E-value=6.7e-08 Score=69.92 Aligned_cols=168 Identities=9% Similarity=0.018 Sum_probs=115.9
Q ss_pred ceeeEEeccCC--eeEEEEcCCCCcEEEEecC--CCEEEEEecCCcccceeeccCCc-CeEEEEEcCCCCCeEEEecCCC
Q psy11351 28 DPIDFYLHERP--VYGLSVDPSQDAIFASACD--DGRVLLFDTRSREEATELAVNSG-PFHAVMFNPVEARLVATANSKD 102 (224)
Q Consensus 28 ~~~~~~~~~~~--v~~~~~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~l~~~~~dg 102 (224)
+.+..+.|... ...+.|+|++ .++++.+. ++.|.++|..+++.+..+..... ....+++.. +.++++.-.++
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g--~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN--EKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEETTCS
T ss_pred eEEEEEECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC--CEEEEEEecCC
Confidence 44556666643 5799999986 66666553 68999999999998777643222 223455543 45666666789
Q ss_pred cEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecccC---CcccceeeeEEEEeCC
Q psy11351 103 GIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHE---GYYNSCTMKSCCFAGT 179 (224)
Q Consensus 103 ~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 179 (224)
.+.++|..+.+.+..+.-... ....+++||+.++++..++.|.++|..+.+.+..+.-. .++.. ...+.|.
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~--~nele~~-- 160 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIR--LNELEYI-- 160 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC--EEEEEEE--
T ss_pred EEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccccc--ceeEEEE--
Confidence 999999999877776643211 22346678888888777889999999998887777321 12111 2234555
Q ss_pred CCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 180 QDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 180 ~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
++..++....++.|.+.|..+++..
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~ 185 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLL 185 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEE
T ss_pred CCEEEEecCCCCeEEEEECCCCcEE
Confidence 5677777767889999999999874
No 241
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.06 E-value=7.9e-08 Score=74.13 Aligned_cols=146 Identities=12% Similarity=0.026 Sum_probs=99.6
Q ss_pred CcceEEEEEeCC------CcEEEEeCCCCceeeEEe---cc-CCeeEEEEcCCCCcEEEEec------------------
Q psy11351 5 DPIKVLRVIGND------DHVISHDMASGDPIDFYL---HE-RPVYGLSVDPSQDAIFASAC------------------ 56 (224)
Q Consensus 5 ~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~---~~-~~v~~~~~~~~~~~~l~s~~------------------ 56 (224)
..| +++++..+ |.|.++|.++.+.+..+. .. ..-+++.|+|++ +.+++..
T Consensus 147 pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~-~~mvsS~wg~p~~~~~g~~~~~~~~ 224 (462)
T 2ece_A 147 PDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPN-EVLVSSEWAVPNTIEDGLKLEHLKD 224 (462)
T ss_dssp SSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTT-TEEEECBCCCHHHHTTCCCTTTHHH
T ss_pred CCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCC-CEEEEccCcCccccccccchhhhhh
Confidence 445 66666665 789999999999988773 21 234568889998 7877774
Q ss_pred -CCCEEEEEecCCcccceeeccC-C-cCeEEEEE--cCCCCCeEEEec------CCCcEEEEecCCCce--eeE--eec-
Q psy11351 57 -DDGRVLLFDTRSREEATELAVN-S-GPFHAVMF--NPVEARLVATAN------SKDGIALYDTRKPKE--VLM--QYG- 120 (224)
Q Consensus 57 -~d~~i~iwd~~~~~~~~~~~~~-~-~~i~~~~~--~~~~~~~l~~~~------~dg~v~i~d~~~~~~--~~~--~~~- 120 (224)
.+.+|.+||+.+++.+.++... . ..-..+.| +| ++++++.+. .++.|.+|....++- ... +..
T Consensus 225 ~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~ 303 (462)
T 2ece_A 225 RYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAE 303 (462)
T ss_dssp HSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCE
T ss_pred ccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCc
Confidence 3689999999988777777542 1 23344545 99 676666655 566787765543311 000 000
Q ss_pred ---------------CCCceeEEEEcCCCCeEeeeec-CCCcEEEECCC
Q psy11351 121 ---------------SCESCMSIRFNKAGTQLLGLRR-RLPPVLYNTRS 153 (224)
Q Consensus 121 ---------------~~~~v~~~~~~~~~~~l~~~~~-d~~v~v~d~~~ 153 (224)
.......+.++|||++|+++.. .+.|.+||+..
T Consensus 304 ~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 304 PLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp ECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred cccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 0245678999999999988764 57899999863
No 242
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.04 E-value=1.5e-08 Score=83.24 Aligned_cols=189 Identities=10% Similarity=0.087 Sum_probs=124.8
Q ss_pred eEEEEEeCCCcEEEEeCCCCceeeEEeccCC------------eeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceee
Q psy11351 8 KVLRVIGNDDHVISHDMASGDPIDFYLHERP------------VYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATEL 75 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------------v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 75 (224)
..++.++.++.|.-+|..+++.+..+..... ...+.+ .+ ..++.++.|+.+..+|.++++.+..+
T Consensus 78 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~-~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WK-GKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ET-TEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--EC-CEEEEEcCCCEEEEEECCCCCEEeee
Confidence 4567777789999999999998877632211 122333 23 57888888999999999999988777
Q ss_pred ccC-C----cCeEE-EEEcCCCCCeEEEec-----CCCcEEEEecCCCceeeEeecCCCc--------------------
Q psy11351 76 AVN-S----GPFHA-VMFNPVEARLVATAN-----SKDGIALYDTRKPKEVLMQYGSCES-------------------- 124 (224)
Q Consensus 76 ~~~-~----~~i~~-~~~~~~~~~~l~~~~-----~dg~v~i~d~~~~~~~~~~~~~~~~-------------------- 124 (224)
... . ..+.+ .... ++.+++..+ .++.|+.||.++++.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred cCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence 654 1 11111 1111 333433332 2689999999999877666532111
Q ss_pred ------------eeEEEEcCCCCeEeeeecCC-------------------CcEEEECCCCCcceecc---cCCc----c
Q psy11351 125 ------------CMSIRFNKAGTQLLGLRRRL-------------------PPVLYNTRSSSPVAQFD---HEGY----Y 166 (224)
Q Consensus 125 ------------v~~~~~~~~~~~l~~~~~d~-------------------~v~v~d~~~~~~~~~~~---~~~~----~ 166 (224)
...++++|++..++.+..++ .|..+|.++|+.+..+. +... .
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~ 312 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTST 312 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccC
Confidence 13578899988888776553 48999999999887763 2111 1
Q ss_pred cceeeeEEEEeCCCC---eEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 167 NSCTMKSCCFAGTQD---EYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 167 ~~~~~~~~~~~~~~~---~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
....+.. ... ++ ..++.++.+|.++++|..+|+..
T Consensus 313 ~~p~l~~--~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 313 QPMILAD--IKI-AGKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp SCCEEEE--EEE-TTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CCcEEEe--ccc-CCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 1111211 111 45 68999999999999999999885
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.04 E-value=3.6e-08 Score=70.65 Aligned_cols=164 Identities=9% Similarity=0.057 Sum_probs=113.7
Q ss_pred eeeEEeccCCe--eEEEEcCCCCcEEEEecCCC--EEEEEecCCcccceeeccCCcCeE--EEEEcCCCCCeEEEecCCC
Q psy11351 29 PIDFYLHERPV--YGLSVDPSQDAIFASACDDG--RVLLFDTRSREEATELAVNSGPFH--AVMFNPVEARLVATANSKD 102 (224)
Q Consensus 29 ~~~~~~~~~~v--~~~~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~l~~~~~dg 102 (224)
.+..+.|...- ..+.|+ ++ .++.+.+.+| .|+.+|+.+++.+..+.... ... .+++. +++++...-.++
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~--g~~ly~ltw~~~ 107 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDW--KDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEecCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEe--CCEEEEEEeeCC
Confidence 44556676544 889998 55 7778887766 99999999999877775433 233 34443 345555555789
Q ss_pred cEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceeccc---CCcccceeeeEEEEeCC
Q psy11351 103 GIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDH---EGYYNSCTMKSCCFAGT 179 (224)
Q Consensus 103 ~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 179 (224)
.+.+||..+.+.+..+.-.. ....++++++.|+.+..++.|+++|..+.+.+..+.- ...+.. +..+.|.
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~--lNELe~~-- 180 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPE--LNELEWV-- 180 (262)
T ss_dssp EEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCC--EEEEEEE--
T ss_pred EEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccc--cceeEEE--
Confidence 99999999998877776422 2233446778887777678899999999988877732 122222 1224444
Q ss_pred CCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 180 QDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 180 ~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
++..++..-.+..|.+.|..+++..
T Consensus 181 ~G~lyan~w~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 181 DGEIFANVWQTNKIVRIDPETGKVT 205 (262)
T ss_dssp TTEEEEEETTSSEEEEECTTTCBEE
T ss_pred CCEEEEEEccCCeEEEEECCCCcEE
Confidence 6777777767889999999999874
No 244
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.01 E-value=3.2e-08 Score=78.75 Aligned_cols=185 Identities=12% Similarity=0.036 Sum_probs=126.8
Q ss_pred cceEEEEEeC-CCcEEEEeCCCCceeeEE--eccCCeeEEEE-c-CCCCcEEEEe------------------cCCCEEE
Q psy11351 6 PIKVLRVIGN-DDHVISHDMASGDPIDFY--LHERPVYGLSV-D-PSQDAIFASA------------------CDDGRVL 62 (224)
Q Consensus 6 ~~~~l~~~~~-dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~-~-~~~~~~l~s~------------------~~d~~i~ 62 (224)
+|+++..... ++.|.+.|+.+.++...+ ........+++ . |++ .+++++ -.++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~-~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRS-NYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBC-SEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCC-cEEEEecccccccCCCCcccccccccCceEE
Confidence 4666665554 567999999999988855 34456888998 4 888 566666 3456899
Q ss_pred EEecCCcccceeeccCCcCeEEEEEcCCCCCeEEEecCCC--------------------------------------cE
Q psy11351 63 LFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKD--------------------------------------GI 104 (224)
Q Consensus 63 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg--------------------------------------~v 104 (224)
+.|..+.+....+..-. .-..++++| +++++++.+.+. .|
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 99999988777775422 346677899 777777776443 36
Q ss_pred EEEecCC--Cce-eeEeecCCCceeEEEEcCCCCeEeeee-cCCCcEEEECCCCCc------------ceecccCCcccc
Q psy11351 105 ALYDTRK--PKE-VLMQYGSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNTRSSSP------------VAQFDHEGYYNS 168 (224)
Q Consensus 105 ~i~d~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~~~~~------------~~~~~~~~~~~~ 168 (224)
.+.|.++ ++. ...+. -.....++.++|||+++++++ .+.+|.++|+.+.+. ........
T Consensus 257 ~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~---- 331 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL---- 331 (595)
T ss_dssp EEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS----
T ss_pred EEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC----
Confidence 6777776 333 22222 223557799999999888765 578899999986431 11111111
Q ss_pred eeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCC
Q psy11351 169 CTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 169 ~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~ 200 (224)
.-..++|+| ++..+++.-.|++|.+||+.+
T Consensus 332 -gP~h~aF~~-dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 332 -GPLHTAFDG-RGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp -CEEEEEECT-TSEEEEEETTTTEEEEEEHHH
T ss_pred -CcceEEECC-CCeEEEEEecCCcEEEEEhhH
Confidence 123367888 577777888899999999987
No 245
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.99 E-value=2.3e-07 Score=71.62 Aligned_cols=190 Identities=13% Similarity=0.076 Sum_probs=120.1
Q ss_pred eEEEEEeCCCcEEEEeCCCC----ceeeEEe-------cc-CCeeEEEEcCCCCcEEEEecCC------CEEEEEecCCc
Q psy11351 8 KVLRVIGNDDHVISHDMASG----DPIDFYL-------HE-RPVYGLSVDPSQDAIFASACDD------GRVLLFDTRSR 69 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~----~~~~~~~-------~~-~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~ 69 (224)
.+++++..+++|.++|+.+. +.++.+. .. ..-..+...|++ +++++..+ +.|.++|.++.
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 35566778899999999755 4444441 11 245567888997 66666555 78999999999
Q ss_pred ccceeeccCCc---CeEEEEEcCCCCCeEEEec-------------------CCCcEEEEecCCCceeeEeecC-C-Cce
Q psy11351 70 EEATELAVNSG---PFHAVMFNPVEARLVATAN-------------------SKDGIALYDTRKPKEVLMQYGS-C-ESC 125 (224)
Q Consensus 70 ~~~~~~~~~~~---~i~~~~~~~~~~~~l~~~~-------------------~dg~v~i~d~~~~~~~~~~~~~-~-~~v 125 (224)
+.+..+..... --..+.|+| +.+.+++.. .+..|.+||+.+.+....+.-. . ...
T Consensus 175 ~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P 253 (462)
T 2ece_A 175 EPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMA 253 (462)
T ss_dssp CEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEE
T ss_pred eEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCcc
Confidence 98887753222 234588899 788888874 3688999999987655555432 1 234
Q ss_pred eEEEE--cCCCCeEeeeec------CCCcEEEECCCCCc--ceec--c---cCCccc---------ceeeeEEEEeCCCC
Q psy11351 126 MSIRF--NKAGTQLLGLRR------RLPPVLYNTRSSSP--VAQF--D---HEGYYN---------SCTMKSCCFAGTQD 181 (224)
Q Consensus 126 ~~~~~--~~~~~~l~~~~~------d~~v~v~d~~~~~~--~~~~--~---~~~~~~---------~~~~~~~~~~~~~~ 181 (224)
..+.| +|+++++++++. +++|.+|....++. ...+ . ..+.+. .-....+.++| ++
T Consensus 254 ~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~-DG 332 (462)
T 2ece_A 254 LELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL-DD 332 (462)
T ss_dssp EEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT-TS
T ss_pred ceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC-CC
Confidence 45655 999999888774 45677665543311 1111 0 000000 01123366777 56
Q ss_pred eEE-EEcCCCCeEEEEeCCCC
Q psy11351 182 EYV-VSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 182 ~~l-~s~~~d~~v~iw~~~~~ 201 (224)
++| ++.-..+.|.+||+...
T Consensus 333 rfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 333 KFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp CEEEEEETTTTEEEEEECSST
T ss_pred CEEEEEeCCCCEEEEEEecCC
Confidence 665 45556789999998643
No 246
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.98 E-value=2.5e-07 Score=74.80 Aligned_cols=181 Identities=10% Similarity=-0.020 Sum_probs=117.1
Q ss_pred CCCcEEEEeCCCCceeeEEeccCCe---------------------------------------eEEEEcCCCCcEEEEe
Q psy11351 15 NDDHVISHDMASGDPIDFYLHERPV---------------------------------------YGLSVDPSQDAIFASA 55 (224)
Q Consensus 15 ~dg~i~iwd~~~~~~~~~~~~~~~v---------------------------------------~~~~~~~~~~~~l~s~ 55 (224)
.+|.|+-+|.++++.+..+....+. ...++.+.. .+++.+
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~-g~vy~g 258 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGT-NLIYFG 258 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCC-CEEEEe
Confidence 3899999999999988766322111 134555665 566666
Q ss_pred cCC----------------CEEEEEecCCcccceeeccCC----------cCeEEEEEc-CCCC---CeEEEecCCCcEE
Q psy11351 56 CDD----------------GRVLLFDTRSREEATELAVNS----------GPFHAVMFN-PVEA---RLVATANSKDGIA 105 (224)
Q Consensus 56 ~~d----------------~~i~iwd~~~~~~~~~~~~~~----------~~i~~~~~~-~~~~---~~l~~~~~dg~v~ 105 (224)
..+ +.|..+|.++++.+..++... .++. +... . ++ ..++.++.+|.+.
T Consensus 259 ~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~-~G~~~~~v~~~~~~G~l~ 336 (599)
T 1w6s_A 259 TGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDK-DGKARKLLTHPDRNGIVY 336 (599)
T ss_dssp CCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECT-TSCEEEEEEEECTTSEEE
T ss_pred CCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-Eecccc-CCcEEEEEEEECCCcEEE
Confidence 554 489999999999877665322 1222 2222 3 45 5677788999999
Q ss_pred EEecCCCceeeEeecC-------------CCce--------------------------eEEEEcCCCCeEeeee-----
Q psy11351 106 LYDTRKPKEVLMQYGS-------------CESC--------------------------MSIRFNKAGTQLLGLR----- 141 (224)
Q Consensus 106 i~d~~~~~~~~~~~~~-------------~~~v--------------------------~~~~~~~~~~~l~~~~----- 141 (224)
++|.++++.+...... ..++ ..++++|+...+++..
T Consensus 337 ~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~ 416 (599)
T 1w6s_A 337 TLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICM 416 (599)
T ss_dssp EEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEE
T ss_pred EEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccce
Confidence 9999998776554311 0111 2356677655554421
Q ss_pred ----------------------------------cCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEc
Q psy11351 142 ----------------------------------RRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSG 187 (224)
Q Consensus 142 ----------------------------------~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 187 (224)
..+.+..||+.+++.+.+.........-.+.. .+.+++.+
T Consensus 417 ~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t------agg~vf~g 490 (599)
T 1w6s_A 417 DWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMAT------AGDLVFYG 490 (599)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEE------TTTEEEEE
T ss_pred eeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEe------cCCEEEEE
Confidence 23678889999998877764333222222222 46677778
Q ss_pred CCCCeEEEEeCCCCCeE
Q psy11351 188 SDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 188 ~~d~~v~iw~~~~~~~~ 204 (224)
+.|+.++.||.++|++.
T Consensus 491 t~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 491 TLDGYLKARDSDTGDLL 507 (599)
T ss_dssp CTTSEEEEEETTTCCEE
T ss_pred CCCCeEEEEECCCCCEE
Confidence 99999999999999874
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.96 E-value=2.7e-07 Score=65.60 Aligned_cols=166 Identities=10% Similarity=-0.002 Sum_probs=113.8
Q ss_pred ceeeEEeccC--CeeEEEEcCCCCcEEEEecCCC--EEEEEecCCcccceeeccCCcC-eEEEEEcCCCCCeEEEecCCC
Q psy11351 28 DPIDFYLHER--PVYGLSVDPSQDAIFASACDDG--RVLLFDTRSREEATELAVNSGP-FHAVMFNPVEARLVATANSKD 102 (224)
Q Consensus 28 ~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~l~~~~~dg 102 (224)
+.+..+.|.. -...+.|++ + .++.+.+.+| .|+.+|+.+++.+..+...... -..+++. +++++...-.++
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEEcCCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC
Confidence 3455566754 466899987 4 6777777754 9999999999987776543221 1234443 345666666789
Q ss_pred cEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecc---cCCcccceeeeEEEEeCC
Q psy11351 103 GIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFD---HEGYYNSCTMKSCCFAGT 179 (224)
Q Consensus 103 ~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 179 (224)
.+.+||..+.+.+..+.-.. .-..+ .+++..|+++..++.|.++|..+.+.+..+. +...+.. ...+.|.
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~-~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~--lNeLe~~-- 158 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPG-EGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDN--LNELEWV-- 158 (243)
T ss_dssp EEEEEETTTTEEEEEEECSS-CCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC--EEEEEEE--
T ss_pred EEEEEECCcCcEEEEEeCCC-CceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccc--ceeeEEe--
Confidence 99999999998777766432 22344 4567777777778889999999998887773 2222222 1224444
Q ss_pred CCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 180 QDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 180 ~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
++..++..-.+..|.+.|..+++..
T Consensus 159 ~G~lyanvw~s~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 159 NGELLANVWLTSRIARIDPASGKVV 183 (243)
T ss_dssp TTEEEEEETTTTEEEEECTTTCBEE
T ss_pred CCEEEEEECCCCeEEEEECCCCCEE
Confidence 6777776667789999999999874
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.96 E-value=6e-08 Score=77.24 Aligned_cols=184 Identities=13% Similarity=0.123 Sum_probs=114.8
Q ss_pred CCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCC-----------------------------------
Q psy11351 15 NDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDG----------------------------------- 59 (224)
Q Consensus 15 ~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~----------------------------------- 59 (224)
.++.+.+.|.++.+....+.-.+....++++|+| +++++++.+.
T Consensus 173 ~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdG-k~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 173 YVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEG-KWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEEEEETTTTEEEEEEEESSCCCCEEECSSS-SEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred cCceEEEEECCCCeEEEEEEeCCCccceEECCCC-CEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 3568999999999888877544466788999998 6766666442
Q ss_pred ---EEEEEecCC--ccc-ceeeccCCcCeEEEEEcCCCCCeE-EEecCCCcEEEEecCCCce-----------eeEeecC
Q psy11351 60 ---RVLLFDTRS--REE-ATELAVNSGPFHAVMFNPVEARLV-ATANSKDGIALYDTRKPKE-----------VLMQYGS 121 (224)
Q Consensus 60 ---~i~iwd~~~--~~~-~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~v~i~d~~~~~~-----------~~~~~~~ 121 (224)
.|.+.|.++ ++. +..+.. .....++.++| +++++ +++..+..|.++|+.+.+. +.....-
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v 329 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 329 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred EECcEEEEeCcccCCceeEEEEec-CCCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC
Confidence 355666665 333 333432 22457899999 66655 5555788999999986531 2222234
Q ss_pred CCceeEEEEcCCCCeEeeeecCCCcEEEECCC----------CCcceecc-cC--CcccceeeeEEEEeCCCCeEEEEcC
Q psy11351 122 CESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS----------SSPVAQFD-HE--GYYNSCTMKSCCFAGTQDEYVVSGS 188 (224)
Q Consensus 122 ~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~----------~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~l~s~~ 188 (224)
......++|+|+|...++.-.|+.|.+||+.+ .+.+.++. +- ++... -.....+| ++++|++..
T Consensus 330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~--~~g~t~~~-DGk~l~~~N 406 (595)
T 1fwx_A 330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKT--VMGETLDA-TNDWLVCLS 406 (595)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEE--TTTTSTTC-CSSEEEEEE
T ss_pred CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccccccccee--ccceEeCC-CCCEEEEcC
Confidence 45678899999994444456788999999876 23333332 11 11100 00012234 788887753
Q ss_pred ---CCCeE----------EEEeCCCCCeE
Q psy11351 189 ---DDFVL----------YMWRVPRDDIY 204 (224)
Q Consensus 189 ---~d~~v----------~iw~~~~~~~~ 204 (224)
.|+.+ .++|+..++..
T Consensus 407 k~skdr~~~~gp~~~~~~ql~dis~~~m~ 435 (595)
T 1fwx_A 407 KFSKDRFLNVGPLKPENDQLIDISGDKMV 435 (595)
T ss_dssp SCCTTSSCCCCSSCCEEEEEEECSSSSCE
T ss_pred CCCccccccCCCCCCCcceEEEcCCCcEE
Confidence 35432 78999766653
No 249
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.96 E-value=3.7e-06 Score=62.71 Aligned_cols=188 Identities=9% Similarity=-0.026 Sum_probs=119.4
Q ss_pred EEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCC----cccceeeccCCcCeEEE
Q psy11351 10 LRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRS----REEATELAVNSGPFHAV 85 (224)
Q Consensus 10 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~~~~~~i~~~ 85 (224)
|+.+. ...|+..|+.+.+.............++|++.+..++.+-..++.|..+++.. ......+...-.....+
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 82 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 82 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred EEEEC-CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEE
Confidence 34433 45799999998877666655567889999987646777777789999999875 22222222222345788
Q ss_pred EEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecC--CCcEEEECCCCCcceecccC
Q psy11351 86 MFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRR--LPPVLYNTRSSSPVAQFDHE 163 (224)
Q Consensus 86 ~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~v~v~d~~~~~~~~~~~~~ 163 (224)
++++.+++++++-...+.|.++|+..................++++|.+..|+.+... +.|..+++.. .....+...
T Consensus 83 avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~ 161 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTE 161 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECS
T ss_pred EEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEEC
Confidence 8886456666676778899999987543322223344567899999977766665543 5677777753 333333111
Q ss_pred CcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 164 GYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
... ....+++.|.++.++++-+..+.|..+|+....
T Consensus 162 -~~~--~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~ 197 (316)
T 1ijq_A 162 -NIQ--WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 197 (316)
T ss_dssp -SCS--CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred -CCC--CceEEEEeccCCEEEEEECCCCeEEEEecCCCc
Confidence 111 122367776556677777778899999987543
No 250
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.95 E-value=2.8e-08 Score=76.91 Aligned_cols=101 Identities=9% Similarity=-0.045 Sum_probs=80.5
Q ss_pred CEEEEEecCCcccceeeccCCcCeEEEEEcCCCCCeEEEec----------CCCcEEEEecCCCceeeEeecC-------
Q psy11351 59 GRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATAN----------SKDGIALYDTRKPKEVLMQYGS------- 121 (224)
Q Consensus 59 ~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~----------~dg~v~i~d~~~~~~~~~~~~~------- 121 (224)
+.|.++|..+++.+..+.....+ .+.++| +++.++.+. .++.|.++|..+.+....+.-.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECC-CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 79999999999998888765666 899999 777666664 4678999999998876665421
Q ss_pred CCceeEEEEcCCCCeEeeeec--CCCcEEEECCCCCcceeccc
Q psy11351 122 CESCMSIRFNKAGTQLLGLRR--RLPPVLYNTRSSSPVAQFDH 162 (224)
Q Consensus 122 ~~~v~~~~~~~~~~~l~~~~~--d~~v~v~d~~~~~~~~~~~~ 162 (224)
......+.|+|||++++++.. ++.|.++|+.+++.+.++.-
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 234567899999999999874 57899999999988887743
No 251
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.91 E-value=2.1e-08 Score=76.25 Aligned_cols=164 Identities=10% Similarity=-0.067 Sum_probs=106.4
Q ss_pred CCCCcceEEEEEe----------CCCcEEEEeCCCCceeeEEecc--------CCeeEEEEcCCCCcEEEEecC--CCEE
Q psy11351 2 ASGDPIKVLRVIG----------NDDHVISHDMASGDPIDFYLHE--------RPVYGLSVDPSQDAIFASACD--DGRV 61 (224)
Q Consensus 2 a~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~l~s~~~--d~~i 61 (224)
+++.++++++.+. .+++|.+||+.+++.+..+.-. .....+.++|+| ++++++.. +..+
T Consensus 71 ~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDG-k~lyVan~~~~~~v 149 (368)
T 1mda_H 71 VAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASS-ACLLFFLFGSSAAA 149 (368)
T ss_dssp EECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTS-SCEEEEECSSSCEE
T ss_pred EECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCC-CEEEEEccCCCCeE
Confidence 4567777777765 3789999999999998887322 346789999999 66666643 4678
Q ss_pred EE--EecCC-----------------------------------------cccce-------------------------
Q psy11351 62 LL--FDTRS-----------------------------------------REEAT------------------------- 73 (224)
Q Consensus 62 ~i--wd~~~-----------------------------------------~~~~~------------------------- 73 (224)
.+ +|..+ ++...
T Consensus 150 ~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs 229 (368)
T 1mda_H 150 GLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV 229 (368)
T ss_dssp EEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB
T ss_pred EEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEc
Confidence 88 77743 00000
Q ss_pred -----eec--cCC---------------------cCeEEEEEcCCCCCeEEEe-c---C-----CCcEEEEecCCCceee
Q psy11351 74 -----ELA--VNS---------------------GPFHAVMFNPVEARLVATA-N---S-----KDGIALYDTRKPKEVL 116 (224)
Q Consensus 74 -----~~~--~~~---------------------~~i~~~~~~~~~~~~l~~~-~---~-----dg~v~i~d~~~~~~~~ 116 (224)
.+. ... .....++++| ++..++.+ . . ++.+.++|+.+.+.+.
T Consensus 230 ~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~-dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~ 308 (368)
T 1mda_H 230 ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK-NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG 308 (368)
T ss_dssp SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEET-TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE
T ss_pred CCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcC-CCCEEEEEeccccCcccccCCCEEEEECCCCeEEE
Confidence 000 000 0001156788 55555543 3 2 2356699999987766
Q ss_pred EeecCCCceeEEEEcCCCCeE-eeee-cCCCcEEEECCCCCcceecccCCcccc
Q psy11351 117 MQYGSCESCMSIRFNKAGTQL-LGLR-RRLPPVLYNTRSSSPVAQFDHEGYYNS 168 (224)
Q Consensus 117 ~~~~~~~~v~~~~~~~~~~~l-~~~~-~d~~v~v~d~~~~~~~~~~~~~~~~~~ 168 (224)
.+.-. .....++|+|+|+.+ ++.. .++.|.++|+.+++.+..+.-......
T Consensus 309 ~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~ 361 (368)
T 1mda_H 309 PISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPES 361 (368)
T ss_dssp CCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCE
T ss_pred EEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCE
Confidence 55432 267899999999854 4555 489999999999999988853333333
No 252
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.90 E-value=1.2e-07 Score=70.83 Aligned_cols=176 Identities=8% Similarity=-0.009 Sum_probs=111.3
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEEEE
Q psy11351 9 VLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMF 87 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~ 87 (224)
.+..++.++.|..+|.+ ++....+ .....+.++.+.+++ .+++ ++ +.+..+| .+++....+......+.++..
T Consensus 149 ~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g-~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~ 222 (330)
T 3hxj_A 149 TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDG-TIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAI 222 (330)
T ss_dssp CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTC-CEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEE
T ss_pred EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCC-EEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEE
Confidence 36667788999999998 7766555 334567777787777 4444 44 7888999 777766666555566778888
Q ss_pred cCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecccC-Ccc
Q psy11351 88 NPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHE-GYY 166 (224)
Q Consensus 88 ~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~-~~~ 166 (224)
.+ ++. +..++.++.+..+|. +++....+......+..+.+.+++ .|.+++.++.+..+|. +++.+..+... ..+
T Consensus 223 ~~-~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~ 297 (330)
T 3hxj_A 223 SE-DGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWII 297 (330)
T ss_dssp CT-TSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCC
T ss_pred CC-CCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccc
Confidence 77 554 444556778888884 454555444433444455565555 5666777878999996 66666555322 222
Q ss_pred cceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 167 NSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 167 ~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
.++ ...+ ++. |..++.+|.+++...+..+
T Consensus 298 ~~~-----~~d~-~g~-l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 298 ATP-----VIDE-NGT-IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp SCC-----EECT-TCC-EEEECTTSCEEEEEC----
T ss_pred cce-----EEcC-CCE-EEEEcCCCeEEEEeccccc
Confidence 222 2222 444 5667889999888765543
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.90 E-value=2.3e-06 Score=65.64 Aligned_cols=191 Identities=11% Similarity=-0.007 Sum_probs=118.1
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEEe-ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEE
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFYL-HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHA 84 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~ 84 (224)
.+.++.+-...+.|..++++......... .......+++.+.+.+++++-...+.|.+.++........+...-.....
T Consensus 127 ~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~g 206 (386)
T 3v65_B 127 RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRA 206 (386)
T ss_dssp TTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEE
T ss_pred CCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcE
Confidence 34455555566778888887665444432 22355788888765467777777889998887654333333333345789
Q ss_pred EEEcCCCCCeEEEecCC-CcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeee-cCCCcEEEECCCCCcceecc-
Q psy11351 85 VMFNPVEARLVATANSK-DGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNTRSSSPVAQFD- 161 (224)
Q Consensus 85 ~~~~~~~~~~l~~~~~d-g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~~~~~~~~~~- 161 (224)
++++|.++.++++-... +.|..+++............-.....++++|++..|+.+. ..+.|..+|+........+.
T Consensus 207 iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~ 286 (386)
T 3v65_B 207 IALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ 286 (386)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECS
T ss_pred EEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEEC
Confidence 99998455555555444 6788888764432222223344578999998877776664 45668888876433322222
Q ss_pred cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 162 HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.......++ +. .+.++++-...+.|..++..+++.
T Consensus 287 ~~~~P~gia-----v~--~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 287 GLPHPFAIT-----VF--EDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp SCSSEEEEE-----EE--TTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCCceEEE-----EE--CCEEEEeeCCCCeEEEEECCCCcc
Confidence 122223333 32 567778878888999999666654
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.90 E-value=4.8e-06 Score=62.98 Aligned_cols=190 Identities=11% Similarity=-0.018 Sum_probs=117.9
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEEe-ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEE
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFYL-HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHA 84 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~ 84 (224)
.+.++.+-...+.|..+++.......... .......+++.+.+.+++++-...+.|.+.++........+...-.....
T Consensus 84 ~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~ 163 (349)
T 3v64_C 84 RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRA 163 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEE
T ss_pred ccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcce
Confidence 34445555556777777777655444332 22456788998765467777777889999998754433233333345689
Q ss_pred EEEcCCCCCeEEEecCC-CcEEEEecCCCceeeEee-cCCCceeEEEEcCCCCeEeeee-cCCCcEEEECCCCCcceecc
Q psy11351 85 VMFNPVEARLVATANSK-DGIALYDTRKPKEVLMQY-GSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNTRSSSPVAQFD 161 (224)
Q Consensus 85 ~~~~~~~~~~l~~~~~d-g~v~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~~~~~~~~~~ 161 (224)
++++|.++.++.+-... +.|..+++.... ...+. ..-.....++++|++..|+.+. ..+.|..+|+........+.
T Consensus 164 iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~ 242 (349)
T 3v64_C 164 IALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS 242 (349)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred EEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe
Confidence 99998555556665555 778888876432 22222 2334578999999877776664 45668888887533222221
Q ss_pred -cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 162 -HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.......++ +. .+.++++-...+.|..++..+++.
T Consensus 243 ~~~~~P~gia-----v~--~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 243 QGLPHPFAIT-----VF--EDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp SSCSSEEEEE-----EE--TTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCCCceEEE-----EE--CCEEEEecCCCCeEEEEEccCCCc
Confidence 122223333 32 567778877888999998666654
No 255
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.89 E-value=8.1e-06 Score=61.77 Aligned_cols=189 Identities=9% Similarity=-0.019 Sum_probs=121.4
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEEEEc
Q psy11351 9 VLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFN 88 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~ 88 (224)
+|+.+ ....|+..++...+..........+..++|++.+..++.+-...+.|..+++........+.........+++.
T Consensus 46 ~ll~~-~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd 124 (349)
T 3v64_C 46 VLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVD 124 (349)
T ss_dssp EEEEE-CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEE
T ss_pred eeEee-cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEe
Confidence 34433 34568888888766655554455688999998664666676778899999987665333333223345688888
Q ss_pred CCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec-C-CCcEEEECCCCCcceecccCCcc
Q psy11351 89 PVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR-R-LPPVLYNTRSSSPVAQFDHEGYY 166 (224)
Q Consensus 89 ~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~v~v~d~~~~~~~~~~~~~~~~ 166 (224)
+.++.++++-...+.|.+.++..................++++|.+..|+.... . +.|..+++.... ...+...+ .
T Consensus 125 ~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~-~ 202 (349)
T 3v64_C 125 WVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTH-L 202 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSS-C
T ss_pred cCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECC-C
Confidence 756667777777789999998754332223234456789999997766665543 3 567777776432 22321111 1
Q ss_pred cceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 167 NSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 167 ~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
. ....++++|.++.++++-+..+.|..+++....
T Consensus 203 ~--~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~ 236 (349)
T 3v64_C 203 F--WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH 236 (349)
T ss_dssp S--CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred C--CcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc
Confidence 1 123367777567777777778899999987543
No 256
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.87 E-value=3.2e-06 Score=64.90 Aligned_cols=189 Identities=9% Similarity=-0.019 Sum_probs=121.3
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEEEEc
Q psy11351 9 VLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFN 88 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~ 88 (224)
+|+.+ ....|+..++...+.............++|++.+..++++-...+.|..+++........+.........++++
T Consensus 89 ~l~~~-~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd 167 (386)
T 3v65_B 89 VLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVD 167 (386)
T ss_dssp EEEEE-CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEE
T ss_pred eeEee-cCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEE
Confidence 44443 34679999998776655555556688999998664677777778899999987655333333222345678888
Q ss_pred CCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec-C-CCcEEEECCCCCcceecccCCcc
Q psy11351 89 PVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR-R-LPPVLYNTRSSSPVAQFDHEGYY 166 (224)
Q Consensus 89 ~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~v~v~d~~~~~~~~~~~~~~~~ 166 (224)
+.++.++++-...+.|.+.++..................++++|.+..|+.... . +.|..+++.... ...+...+ .
T Consensus 168 ~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~-~ 245 (386)
T 3v65_B 168 WVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTH-L 245 (386)
T ss_dssp TTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSS-C
T ss_pred eCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-cEEEEECC-C
Confidence 745667777777788999888754332223333456789999998777666543 3 567777776433 22221111 1
Q ss_pred cceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 167 NSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 167 ~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
. ....++++|.++.++++-+..+.|..+++....
T Consensus 246 ~--~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (386)
T 3v65_B 246 F--WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH 279 (386)
T ss_dssp S--CEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS
T ss_pred C--CeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe
Confidence 1 122366766566777777778899999987543
No 257
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.87 E-value=1e-06 Score=71.25 Aligned_cols=138 Identities=9% Similarity=-0.044 Sum_probs=91.4
Q ss_pred CEEEEEecCCcccceeecc--CC--------cCeEEEEEc-CCCC---CeEEEecCCCcEEEEecCCCceeeEeecCC--
Q psy11351 59 GRVLLFDTRSREEATELAV--NS--------GPFHAVMFN-PVEA---RLVATANSKDGIALYDTRKPKEVLMQYGSC-- 122 (224)
Q Consensus 59 ~~i~iwd~~~~~~~~~~~~--~~--------~~i~~~~~~-~~~~---~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~-- 122 (224)
+.|..+|.++++.+..++. |. .++. +... . ++ ..++.++.+|.++++|.++++.+.......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~ 368 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAK-DGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNI 368 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECS-SSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecC-CCCEEEEEEEECCCceEEEEECCCCCEecccccccCc
Confidence 6899999999998877643 21 1222 2222 3 44 478889999999999999987765443211
Q ss_pred -----------Cc--------------------------------eeEEEEcCCCCeEeeee------------------
Q psy11351 123 -----------ES--------------------------------CMSIRFNKAGTQLLGLR------------------ 141 (224)
Q Consensus 123 -----------~~--------------------------------v~~~~~~~~~~~l~~~~------------------ 141 (224)
.+ -..++++|+...+++..
T Consensus 369 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~ 448 (582)
T 1flg_A 369 TWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGS 448 (582)
T ss_dssp CSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTS
T ss_pred cccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCC
Confidence 00 01346676655555432
Q ss_pred ---------------cCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 142 ---------------RRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 142 ---------------~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
.++.|..||+.+++.+.+.........-.+.. .+.+++.++.|+.++.||.++|++.
T Consensus 449 ~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t------agglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 449 AYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLAT------AGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp CCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEE------TTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEe------CCCEEEEECCCCcEEEEECCCCCEE
Confidence 25678999999999887774433333322222 4667777999999999999999884
No 258
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.84 E-value=1.4e-05 Score=61.56 Aligned_cols=189 Identities=8% Similarity=-0.030 Sum_probs=123.7
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc----ccceeeccCCcCeEE
Q psy11351 9 VLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR----EEATELAVNSGPFHA 84 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----~~~~~~~~~~~~i~~ 84 (224)
+|+.+. ...|+..++...+..........+..++|++.+..++.+-...+.|+.+++... .....+.........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 444443 568999999887766666666788999999876466677677889999998652 222223323445788
Q ss_pred EEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec--CCCcEEEECCCCCcceeccc
Q psy11351 85 VMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR--RLPPVLYNTRSSSPVAQFDH 162 (224)
Q Consensus 85 ~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~v~d~~~~~~~~~~~~ 162 (224)
+++.+.+++++++-...+.|.+.++........+.........++++|.+.+|+.... .+.|...++...........
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 9998756667777777889999998765433333334456789999998777766542 36788888764333222221
Q ss_pred -CCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 163 -EGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 163 -~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
-...+ .+++.+.++.++++-+..+.|..+|+.....
T Consensus 244 ~l~~P~-----glavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 244 NIQWPN-----GITLDLLSGRLYWVDSKLHSISSIDVNGGNR 280 (400)
T ss_dssp SCSCEE-----EEEEETTTTEEEEEETTTTEEEEEETTSCCC
T ss_pred CCCceE-----EEEEEeCCCEEEEEECCCCEEEEEeCCCCcc
Confidence 12222 3666665566667766778999999876543
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.82 E-value=3.7e-07 Score=75.01 Aligned_cols=189 Identities=13% Similarity=0.091 Sum_probs=122.5
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEEeccCC------------eeEEEEcCCCCcEEEEecCCCEEEEEecCCccccee
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFYLHERP------------VYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATE 74 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------------v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 74 (224)
+..++.++.++.|.-+|..+++.+..+..... -..+.+. + ..++.++.|+.|..+|.++++.+..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--G-DKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--B-TEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--C-CEEEEEcCCCEEEEEECCCCCEeee
Confidence 34677777899999999999998877632111 0112232 3 4777888899999999999998777
Q ss_pred eccCC----cCeEE-EEEcCCCCCeEEEecC------CCcEEEEecCCCceeeEeecC---CC-----------------
Q psy11351 75 LAVNS----GPFHA-VMFNPVEARLVATANS------KDGIALYDTRKPKEVLMQYGS---CE----------------- 123 (224)
Q Consensus 75 ~~~~~----~~i~~-~~~~~~~~~~l~~~~~------dg~v~i~d~~~~~~~~~~~~~---~~----------------- 123 (224)
+.... ..+.+ ..+. ++ .++.+.. +|.|..+|.++++.+..+... ..
T Consensus 143 ~~~~~~~~~~~~~~~P~v~--~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVV--KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EECSCTTSSCBCCSCCEEE--TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred eccCCCCCcceecCCCEEE--CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 65421 11111 1111 33 3444432 588999999999887666421 00
Q ss_pred -----------ceeEEEEcCCCCeEeeeecCC-------------------CcEEEECCCCCcceecc---cCCcc----
Q psy11351 124 -----------SCMSIRFNKAGTQLLGLRRRL-------------------PPVLYNTRSSSPVAQFD---HEGYY---- 166 (224)
Q Consensus 124 -----------~v~~~~~~~~~~~l~~~~~d~-------------------~v~v~d~~~~~~~~~~~---~~~~~---- 166 (224)
....++++|+...++.+..++ .|..+|.++|+.+..+. |...-
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~ 299 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTAT 299 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCC
Confidence 112468888888888876655 38899999999887773 21111
Q ss_pred cceeeeEEEEeCCCCe---EEEEcCCCCeEEEEeCCCCCeE
Q psy11351 167 NSCTMKSCCFAGTQDE---YVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 167 ~~~~~~~~~~~~~~~~---~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
....+..+.+ ++. .++.++.+|.++++|..+|+..
T Consensus 300 ~~~~~~d~~~---~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 300 QQITLAELNI---DGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp SCEEEEEEEE---TTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CCcEEEEecc---CCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 1111111222 454 6899999999999999999875
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.79 E-value=4.2e-06 Score=62.45 Aligned_cols=187 Identities=9% Similarity=0.057 Sum_probs=110.1
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEEe-----ccCCeeEEEEcC-CCCcEEEEecC-----------------CCEEE
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFYL-----HERPVYGLSVDP-SQDAIFASACD-----------------DGRVL 62 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~l~s~~~-----------------d~~i~ 62 (224)
.+++++ +...+.|..+|..+++...... .......+++.+ +| ++.++-.. ++.|.
T Consensus 91 ~g~l~v-~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 91 NNQLYI-VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp TTEEEE-EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred CCcEEE-EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEE
Confidence 454444 4344558888877654332221 123578899999 88 66665432 47888
Q ss_pred EEecCCcccceeeccCCcCeEEEEEcCCCCCe-EEEecCCCcEEEEecCCCc--eeeEeecCCCceeEEEEcCCCCeEee
Q psy11351 63 LFDTRSREEATELAVNSGPFHAVMFNPVEARL-VATANSKDGIALYDTRKPK--EVLMQYGSCESCMSIRFNKAGTQLLG 139 (224)
Q Consensus 63 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l~~~~~dg~v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~ 139 (224)
.+|..+++....... ......++++| +++. +++-+.++.|..|++.... ....+....+ ...++++++|++.++
T Consensus 169 ~~d~~~~~~~~~~~~-~~~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va 245 (322)
T 2fp8_A 169 KYDPSTKETTLLLKE-LHVPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVS 245 (322)
T ss_dssp EEETTTTEEEEEEEE-ESCCCEEEECT-TSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEE
T ss_pred EEeCCCCEEEEeccC-CccCcceEECC-CCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEE
Confidence 898876653222221 22346799999 7664 4454667889999987421 1112212223 788999999986666
Q ss_pred eec----------CCCcEEEECCCCCcceecccC-Cc-ccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 140 LRR----------RLPPVLYNTRSSSPVAQFDHE-GY-YNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 140 ~~~----------d~~v~v~d~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
... .+.|..+|.. ++.+..+... +. ... ...+++. ++.++++...++.|..+++....
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~--~~~~~~~--~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 246 SSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEH--FEQIQEH--DGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp EEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSC--CCEEEEE--TTEEEEECSSCSEEEEEEC----
T ss_pred ecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCcccc--ceEEEEe--CCEEEEeecCCCceEEEeccccc
Confidence 544 3567888864 6666666322 21 111 1123332 67888887788899999986543
No 261
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.76 E-value=1.9e-06 Score=64.29 Aligned_cols=187 Identities=13% Similarity=0.051 Sum_probs=110.7
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEe--------------------ccCCeeEEEEcC-CCCcEEEEecCCCE
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYL--------------------HERPVYGLSVDP-SQDAIFASACDDGR 60 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--------------------~~~~v~~~~~~~-~~~~~l~s~~~d~~ 60 (224)
+.+..++++.++..++.|..|+..+++...... ....+..+++.+ ++ +++++.. .+.
T Consensus 25 ~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~d~-~~~ 102 (322)
T 2fp8_A 25 TFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIVDC-YYH 102 (322)
T ss_dssp ECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEEET-TTE
T ss_pred EEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEEEC-CCC
Confidence 455667767788889999999988765443221 113578999998 55 5555434 455
Q ss_pred EEEEecCCcccceeec----c-CCcCeEEEEEcCCCCCeEEEecC-----------------CCcEEEEecCCCceeeEe
Q psy11351 61 VLLFDTRSREEATELA----V-NSGPFHAVMFNPVEARLVATANS-----------------KDGIALYDTRKPKEVLMQ 118 (224)
Q Consensus 61 i~iwd~~~~~~~~~~~----~-~~~~i~~~~~~~~~~~~l~~~~~-----------------dg~v~i~d~~~~~~~~~~ 118 (224)
|..+|..+++. ..+. + .......+++.+.+++++++-.. ++.|..||..+++.. .+
T Consensus 103 i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~-~~ 180 (322)
T 2fp8_A 103 LSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT-LL 180 (322)
T ss_dssp EEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE-EE
T ss_pred EEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE-Ee
Confidence 88888775542 2221 1 11246789998823455554322 367888888766432 22
Q ss_pred ecCCCceeEEEEcCCCCeEeee-ecCCCcEEEECCCCCc--ceec-ccCCcccceeeeEEEEeCCCCeEEEEcCC-----
Q psy11351 119 YGSCESCMSIRFNKAGTQLLGL-RRRLPPVLYNTRSSSP--VAQF-DHEGYYNSCTMKSCCFAGTQDEYVVSGSD----- 189 (224)
Q Consensus 119 ~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~v~d~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~----- 189 (224)
.........++++|+++.|+++ ...+.|.+|++..... ...+ ...+ ...+++.+ +++++++...
T Consensus 181 ~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g------P~gi~~d~-~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 181 LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN------PGNIKRNA-DGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS------EEEEEECT-TSCEEEEEEEETTSS
T ss_pred ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC------CCCeEECC-CCCEEEEecCccccc
Confidence 2222344679999999977665 4567899999875321 1112 1112 22355555 5666665433
Q ss_pred -----CCeEEEEeCC
Q psy11351 190 -----DFVLYMWRVP 199 (224)
Q Consensus 190 -----d~~v~iw~~~ 199 (224)
.+.|..+|..
T Consensus 254 ~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 254 MHGRVDPKGIKFDEF 268 (322)
T ss_dssp TTSCEEEEEEEECTT
T ss_pred ccCCCccEEEEECCC
Confidence 4567777754
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.73 E-value=8.7e-06 Score=60.34 Aligned_cols=190 Identities=12% Similarity=0.075 Sum_probs=113.1
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecC-C-CEEEEEecCCcccceeec-cC
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACD-D-GRVLLFDTRSREEATELA-VN 78 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-d-~~i~iwd~~~~~~~~~~~-~~ 78 (224)
+++..++++++-..++.|..||... +.............+++.+++ +++++... + ..|..+|..+++...... ..
T Consensus 38 a~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~ 115 (306)
T 2p4o_A 38 ASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSDGTVETLLTLPD 115 (306)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTS-CEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred EECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCC-cEEEEeccCCcceEEEEcCCCCeEEEEEeCCC
Confidence 4556677777766788999999875 344444455678999999998 56555433 2 357777777766432221 11
Q ss_pred CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCce-eeEee---------cCCCceeEEEEcCCCCeEeeee-cCCCcE
Q psy11351 79 SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKE-VLMQY---------GSCESCMSIRFNKAGTQLLGLR-RRLPPV 147 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~-~~~~~---------~~~~~v~~~~~~~~~~~l~~~~-~d~~v~ 147 (224)
......++..+ ++..+++-..++.|..+|...++. +.... ..-.....+ +|+++.|+++. ..+.|.
T Consensus 116 ~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~ 192 (306)
T 2p4o_A 116 AIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLL 192 (306)
T ss_dssp CSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEE
T ss_pred ccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEE
Confidence 12234555555 555566655688899999875421 11100 111234455 78887776654 467799
Q ss_pred EEECCC-CCc--ceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 148 LYNTRS-SSP--VAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 148 v~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.+++.. ++. ...+........ +++.+ +++++++....+.|.+++.. ++.
T Consensus 193 ~~~~~~~g~~~~~~~~~~~~~P~g-----i~vd~-dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 193 RIPVDSTDKPGEPEIFVEQTNIDD-----FAFDV-EGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp EEEBCTTSCBCCCEEEEESCCCSS-----EEEBT-TCCEEEECBTTCCEEEECTT-CCE
T ss_pred EEEeCCCCCCCccEEEeccCCCCC-----eEECC-CCCEEEEeCCCCeEEEECCC-CCE
Confidence 999875 321 111111112233 45555 68888887778899999875 544
No 263
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.70 E-value=2.1e-06 Score=69.48 Aligned_cols=194 Identities=7% Similarity=0.053 Sum_probs=120.8
Q ss_pred eEEEEEeC-CCcEEEEeC-CCCceeeEEeccCC------------eeEEEEcCCCCc---EEEEecCCCEEEEEecCCcc
Q psy11351 8 KVLRVIGN-DDHVISHDM-ASGDPIDFYLHERP------------VYGLSVDPSQDA---IFASACDDGRVLLFDTRSRE 70 (224)
Q Consensus 8 ~~l~~~~~-dg~i~iwd~-~~~~~~~~~~~~~~------------v~~~~~~~~~~~---~l~s~~~d~~i~iwd~~~~~ 70 (224)
..+..++. ++.|.-+|. .+++.+..+..... ...+++.|.+.. +++.++.|+.+..+|.++++
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 45666676 899999999 89998877632211 123455443312 37778889999999999999
Q ss_pred cceeeccCC----cCeEE-EEEcCCCCCeEEEec------CCCcEEEEecCCCceeeEeecCCCc---------------
Q psy11351 71 EATELAVNS----GPFHA-VMFNPVEARLVATAN------SKDGIALYDTRKPKEVLMQYGSCES--------------- 124 (224)
Q Consensus 71 ~~~~~~~~~----~~i~~-~~~~~~~~~~l~~~~------~dg~v~i~d~~~~~~~~~~~~~~~~--------------- 124 (224)
.+....... ..+.+ -.+. ++ .++.++ .++.|+-+|.++++.+..+......
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v~--~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYVV--KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEE--TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred EEEeecCCCCCccceeecCCEEE--CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 876654321 01111 1111 33 444443 3789999999999877665532111
Q ss_pred ----------------------e-eEEEEcCCCCeEeeeecC----------------CCcEEEECCCCCcceecccCCc
Q psy11351 125 ----------------------C-MSIRFNKAGTQLLGLRRR----------------LPPVLYNTRSSSPVAQFDHEGY 165 (224)
Q Consensus 125 ----------------------v-~~~~~~~~~~~l~~~~~d----------------~~v~v~d~~~~~~~~~~~~~~~ 165 (224)
+ ..+++.+....++.+..+ +.|..+|.++|+.+..+....+
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 0 134666777777776554 3689999999998877732111
Q ss_pred -c--cceeeeEEEEeC--CCC---eEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 166 -Y--NSCTMKSCCFAG--TQD---EYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 166 -~--~~~~~~~~~~~~--~~~---~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
. ......++.+.. .++ ..++.++.+|.++++|..+|+..
T Consensus 300 d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 300 DEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp CSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred ccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 0 001011111210 145 56888999999999999999885
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.69 E-value=3.7e-05 Score=57.28 Aligned_cols=188 Identities=11% Similarity=0.010 Sum_probs=114.8
Q ss_pred ceEEEEEeCCCcEEEEeCCC----CceeeEEe-ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcC
Q psy11351 7 IKVLRVIGNDDHVISHDMAS----GDPIDFYL-HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP 81 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~----~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 81 (224)
+.++.+-...+.|..+++.. ........ .-.....+++.+.+.+++++-...+.|.+.+.........+......
T Consensus 42 ~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 121 (316)
T 1ijq_A 42 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSK 121 (316)
T ss_dssp TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCC
T ss_pred CEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCC
Confidence 45555655678888888875 22222222 22456789998755467777777899999998754332223323346
Q ss_pred eEEEEEcCCCCCeEEEecCC-CcEEEEecCCCceeeEee-cCCCceeEEEEcCCCCeEeeee-cCCCcEEEECCCCCcce
Q psy11351 82 FHAVMFNPVEARLVATANSK-DGIALYDTRKPKEVLMQY-GSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNTRSSSPVA 158 (224)
Q Consensus 82 i~~~~~~~~~~~~l~~~~~d-g~v~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~~~~~~~ 158 (224)
...++++|.++.++++.... +.|..+++... ....+. ..-.....+++++++..|+.+. ..+.|..+|+... ...
T Consensus 122 P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~ 199 (316)
T 1ijq_A 122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRK 199 (316)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCE
T ss_pred cceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceE
Confidence 78999998455555554333 67888887633 222222 2345678999999877777665 4567999998743 333
Q ss_pred ec-cc---CCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 159 QF-DH---EGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 159 ~~-~~---~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.+ .. ...... +++. .+.++++-...+.|..++..+++.
T Consensus 200 ~~~~~~~~~~~P~g-----iav~--~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 200 TILEDEKRLAHPFS-----LAVF--EDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp EEEECTTTTSSEEE-----EEEE--TTEEEEEETTTTEEEEEETTTCCC
T ss_pred EEeecCCccCCcEE-----EEEE--CCEEEEEECCCCeEEEEeCCCCcc
Confidence 33 21 112222 3332 467777777888999999877654
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.63 E-value=8.2e-06 Score=65.83 Aligned_cols=150 Identities=12% Similarity=0.007 Sum_probs=94.3
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEEeccC-----CeeE-EEEcCCCCcEEEEecC------CCEEEEEecCCccccee
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFYLHER-----PVYG-LSVDPSQDAIFASACD------DGRVLLFDTRSREEATE 74 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~v~~-~~~~~~~~~~l~s~~~------d~~i~iwd~~~~~~~~~ 74 (224)
+..++.++.|+.+..+|..+++.+..+.... .+.+ .... ++ .++.++. ++.|..+|.++++.+..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g--~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD--TVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT--EEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC--EEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 4467788889999999999999887663211 2221 1111 33 4444443 79999999999987766
Q ss_pred eccCCcC--------------------------------------eEEEEEcCCCCCeEEEecCC---------------
Q psy11351 75 LAVNSGP--------------------------------------FHAVMFNPVEARLVATANSK--------------- 101 (224)
Q Consensus 75 ~~~~~~~--------------------------------------i~~~~~~~~~~~~l~~~~~d--------------- 101 (224)
+...... -..+++.+ ....++.++.+
T Consensus 192 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~-~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDP-KLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcC-CCCeEEEECCCCccccCCccCCCcee
Confidence 5432110 01345666 44455554432
Q ss_pred -CcEEEEecCCCceeeEeec--CC-------CceeEEEEcCCCC---eEeeeecCCCcEEEECCCCCcceec
Q psy11351 102 -DGIALYDTRKPKEVLMQYG--SC-------ESCMSIRFNKAGT---QLLGLRRRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 102 -g~v~i~d~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~d~~v~v~d~~~~~~~~~~ 160 (224)
+.|..+|.++++....+.. |. ....-+...++|+ .++.++.+|.++++|..+++.+..+
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 3589999999987766542 21 1111122234674 5677888999999999999887665
No 266
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.62 E-value=7.7e-05 Score=57.48 Aligned_cols=190 Identities=12% Similarity=0.009 Sum_probs=115.2
Q ss_pred ceEEEEEeCCCcEEEEeCCCC----ceeeEEe-ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcC
Q psy11351 7 IKVLRVIGNDDHVISHDMASG----DPIDFYL-HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP 81 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~----~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 81 (224)
+.++.+-...+.|+.+++... ....... .......+++.+.+.+++++-...+.|.+.++........+...-..
T Consensus 124 ~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~ 203 (400)
T 3p5b_L 124 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSK 203 (400)
T ss_dssp TEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCC
T ss_pred CceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCC
Confidence 344444445667777777642 2222332 34567889998855477777778889999998755433333333345
Q ss_pred eEEEEEcCCCCCeEEEecC-CCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeee-cCCCcEEEECCCCCccee
Q psy11351 82 FHAVMFNPVEARLVATANS-KDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNTRSSSPVAQ 159 (224)
Q Consensus 82 i~~~~~~~~~~~~l~~~~~-dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~~~~~~~~ 159 (224)
...++++|.++.++.+-.. .+.|...++............-.....+++++++..|+.+. ..+.|..+|+........
T Consensus 204 P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 204 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp EEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred cceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 7899999944555554422 46788888864433222223335678999999888777765 356688888865433222
Q ss_pred cccC---CcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 160 FDHE---GYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 160 ~~~~---~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.... .....+ +.. .+.++++-...+.|..+|..+++.
T Consensus 284 ~~~~~~l~~P~gl-----~v~--~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 284 LEDEKRLAHPFSL-----AVF--EDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp EECSSTTSSEEEE-----EEE--TTEEEEEESSSCSEEEEESSSCCC
T ss_pred EeCCCCCCCCEEE-----EEe--CCEEEEecCCCCeEEEEEcCCCCc
Confidence 2211 111222 222 567777777788999999777754
No 267
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.62 E-value=6e-05 Score=56.22 Aligned_cols=183 Identities=6% Similarity=-0.063 Sum_probs=116.9
Q ss_pred CCcEEEEeCCCCc--eeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccc-eeeccCCcCeEEEEEcCCCC
Q psy11351 16 DDHVISHDMASGD--PIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEA-TELAVNSGPFHAVMFNPVEA 92 (224)
Q Consensus 16 dg~i~iwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~~~~i~~~~~~~~~~ 92 (224)
...|+..++.... .............++|++.+..++.+-...+.|..++...+... ..+...-.....+++.+.++
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 5689999998764 22223334457789999865467777777889999998765422 22222223456788887466
Q ss_pred CeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec--CCCcEEEECCCCCcceecccCCccccee
Q psy11351 93 RLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR--RLPPVLYNTRSSSPVAQFDHEGYYNSCT 170 (224)
Q Consensus 93 ~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~v~d~~~~~~~~~~~~~~~~~~~~ 170 (224)
.++++-...+.|.++++..................++++|.+..|+.... .+.|...++... ....+...+ +. .
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~-l~--~ 167 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSE-IY--W 167 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECSS-CS--C
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEECC-CC--C
Confidence 67777677789999998754322222244456789999998777666652 466777777533 222321111 11 1
Q ss_pred eeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 171 MKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 171 ~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
-..++++|.++.++++=+..+.|..+|+....
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~ 199 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 199 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCCCc
Confidence 23467777566777777778899999987543
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.62 E-value=1.8e-05 Score=56.87 Aligned_cols=166 Identities=8% Similarity=0.116 Sum_probs=112.0
Q ss_pred eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeecc-CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCC
Q psy11351 34 LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAV-NSGPFHAVMFNPVEARLVATANSKDGIALYDTRKP 112 (224)
Q Consensus 34 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~ 112 (224)
+-...+..++|+|++..++++...++.|...|.. ++.++.+.- .......+++.+ ++.++++.-.++.+.++++...
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTT
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCC
Confidence 3446799999999875677778889999999987 776666532 124578888888 7777677667788999988654
Q ss_pred cee---eEee------cCCCceeEEEEcCCCCeEeeeecCCCcEEEECCC---CCcceeccc---CCcccceeeeEEEEe
Q psy11351 113 KEV---LMQY------GSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS---SSPVAQFDH---EGYYNSCTMKSCCFA 177 (224)
Q Consensus 113 ~~~---~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~---~~~~~~~~~---~~~~~~~~~~~~~~~ 177 (224)
... .... ........++|+|.++.|+++.......+|.... ...+..... .....-..++.+.+.
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~d 181 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFN 181 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEE
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEc
Confidence 321 1111 1334568999999998888877766656666541 111222111 011111235678899
Q ss_pred CCCCeEEEEcCCCCeEEEEeCCCC
Q psy11351 178 GTQDEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 178 ~~~~~~l~s~~~d~~v~iw~~~~~ 201 (224)
|..+.+++.....+.|.++|....
T Consensus 182 p~tg~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 182 QQKNTLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp TTTTEEEEEETTTTEEEEECTTCC
T ss_pred CCCCeEEEEECCCCeEEEEcCCCC
Confidence 988888888888899999997644
No 269
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.59 E-value=0.0001 Score=61.57 Aligned_cols=184 Identities=9% Similarity=-0.023 Sum_probs=118.5
Q ss_pred CCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc----ccceeeccCCcCeEEEEEcCC
Q psy11351 15 NDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR----EEATELAVNSGPFHAVMFNPV 90 (224)
Q Consensus 15 ~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----~~~~~~~~~~~~i~~~~~~~~ 90 (224)
....|+..++...+...+......+..++|++.+..++++-...+.|+.+++... .....+.........|++.+.
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred cccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 3467888998877766666556778899999865467777777889999998753 222233323345678899874
Q ss_pred CCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec--CCCcEEEECCCCCcceeccc-CCccc
Q psy11351 91 EARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR--RLPPVLYNTRSSSPVAQFDH-EGYYN 167 (224)
Q Consensus 91 ~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~v~d~~~~~~~~~~~~-~~~~~ 167 (224)
+++++++-...+.|.+.++........+.........|+++|.+.+|+.... .+.|...++........+.. -...+
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~ 561 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 561 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCce
Confidence 5577777778889999998755433333344456889999998777766653 25677788764333222221 12223
Q ss_pred ceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 168 SCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 168 ~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
. +++.+..+.++++-...+.|..+++.....
T Consensus 562 G-----LavD~~~~~LYwaD~~~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 562 G-----ITLDLLSGRLYWVDSKLHSISSIDVNGGNR 592 (791)
T ss_dssp E-----EEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred E-----EEEecCCCeEEEEeCCCCcEEEEecCCCce
Confidence 3 555554566666666677888888866544
No 270
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.57 E-value=1.5e-05 Score=64.42 Aligned_cols=164 Identities=13% Similarity=0.130 Sum_probs=101.4
Q ss_pred CcEEEEeCCCCceeeEEe---cc--------CCeeEEEEc-CCCC--cEEEEecCCCEEEEEecCCcccceeeccCC---
Q psy11351 17 DHVISHDMASGDPIDFYL---HE--------RPVYGLSVD-PSQD--AIFASACDDGRVLLFDTRSREEATELAVNS--- 79 (224)
Q Consensus 17 g~i~iwd~~~~~~~~~~~---~~--------~~v~~~~~~-~~~~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--- 79 (224)
+.|.-+|.++++.+..+. |. .++. +... .+|. ..++.++.+|.++++|.++++.+..+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 689999999999887763 32 1221 2221 3452 378889999999999999998765543221
Q ss_pred ----------cC--------------------------------eEEEEEcCCCCCeEEEe-------------------
Q psy11351 80 ----------GP--------------------------------FHAVMFNPVEARLVATA------------------- 98 (224)
Q Consensus 80 ----------~~--------------------------------i~~~~~~~~~~~~l~~~------------------- 98 (224)
.+ -..++++|..+.+++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 00 01345666333333321
Q ss_pred -------------cCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecccCCc
Q psy11351 99 -------------NSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGY 165 (224)
Q Consensus 99 -------------~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~ 165 (224)
..+|.|.-||+.+++......... ++..-.....+..++.++.|+.++.||.++|+.+.++.....
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g 528 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG 528 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCC
Confidence 135789999999998766554321 222111222467788899999999999999999998854444
Q ss_pred ccceeeeEEEEeCCCCe-EEEE
Q psy11351 166 YNSCTMKSCCFAGTQDE-YVVS 186 (224)
Q Consensus 166 ~~~~~~~~~~~~~~~~~-~l~s 186 (224)
+.. .++.|.. +++ |+++
T Consensus 529 ~~a---~P~~y~~-~G~qYv~~ 546 (582)
T 1flg_A 529 IVS---PPITWEQ-DGEQYLGV 546 (582)
T ss_dssp CCS---CCEEEEE-TTEEEEEE
T ss_pred ccc---CceEEEE-CCEEEEEE
Confidence 332 2344433 555 4443
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.53 E-value=9e-05 Score=53.27 Aligned_cols=188 Identities=9% Similarity=0.095 Sum_probs=113.4
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccc---eeec----
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEA---TELA---- 76 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---~~~~---- 76 (224)
.+.++++...++.|...|.. ++.++.+ +-......+++.+++ .++++.-.++.+.++++.....+ ....
T Consensus 38 ~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~ 115 (255)
T 3qqz_A 38 SNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN-QFVISDERDYAIYVISLTPNSEVKILKKIKIPLQ 115 (255)
T ss_dssp TTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT-EEEEEETTTTEEEEEEECTTCCEEEEEEEECCCS
T ss_pred CCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC-EEEEEECCCCcEEEEEcCCCCeeeeeeeeccccc
Confidence 45677778888999999998 7777766 223578889999887 67677667789999987654421 1111
Q ss_pred --cCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecC---CCceeeEee-------cCCCceeEEEEcCCCC-eEeeeecC
Q psy11351 77 --VNSGPFHAVMFNPVEARLVATANSKDGIALYDTR---KPKEVLMQY-------GSCESCMSIRFNKAGT-QLLGLRRR 143 (224)
Q Consensus 77 --~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~---~~~~~~~~~-------~~~~~v~~~~~~~~~~-~l~~~~~d 143 (224)
........++|+| .+..|.++.......+|.+. ......... .......+++++|... +++....+
T Consensus 116 ~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s 194 (255)
T 3qqz_A 116 ESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES 194 (255)
T ss_dssp SCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT
T ss_pred cccccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCC
Confidence 2234578999999 55455555454444555543 111111111 1334578999999754 55555566
Q ss_pred CCcEEEECCCCCcceecccCCcccc-----eeeeEEEEeCCCCeEEEEcCCCCeEEEEeCC
Q psy11351 144 LPPVLYNTRSSSPVAQFDHEGYYNS-----CTMKSCCFAGTQDEYVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 144 ~~v~v~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~ 199 (224)
+.+.++|.. ++.+..+........ -...-+++.+ +++++++ ++...++.|.-.
T Consensus 195 ~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyIv-sE~n~~y~f~~~ 252 (255)
T 3qqz_A 195 RALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYIV-SEPNRFYRFTPQ 252 (255)
T ss_dssp TEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEEE-ETTTEEEEEEC-
T ss_pred CeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECC-CCCEEEE-cCCceEEEEEec
Confidence 778888865 555554432211100 1233467777 6776555 666677777543
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.52 E-value=1.3e-05 Score=62.49 Aligned_cols=142 Identities=11% Similarity=0.083 Sum_probs=90.2
Q ss_pred eEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCc-EEEEecCCC----EEEEEecCCcccc--eeeccCCc
Q psy11351 8 KVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDA-IFASACDDG----RVLLFDTRSREEA--TELAVNSG 80 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~d~----~i~iwd~~~~~~~--~~~~~~~~ 80 (224)
..|..+...+.|+.+|+++++.............++|++++ + ++++-..++ .+...+ ..+... ..+.. ..
T Consensus 150 g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G-~~lyvad~~~~~~~~~v~~~~-~~g~~~~~~~l~~-~~ 226 (430)
T 3tc9_A 150 NHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEA-DSMIITNDQNNNDRPNNYILT-RESGFKVITELTK-GQ 226 (430)
T ss_dssp EEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTS-SEEEEEECCSCTTSEEEEEEE-GGGTSCSEEEEEE-CS
T ss_pred CeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCC-CEEEEEeCCCCcccceEEEEe-CCCceeeeeeecc-CC
Confidence 34444444488999999887665555555678899999998 6 444443222 343344 333322 22222 23
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee-cCCCceeEEEEcCCCCeEeeee-cCCCcEEEECC
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY-GSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNTR 152 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~ 152 (224)
....++++|.++.++++-..++.|..+|........... ........++|+|+|++|+.+. ..+.|..++..
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 356788999666777777678899999988664322222 2234567899999999666554 56678887765
No 273
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.52 E-value=2.8e-06 Score=70.15 Aligned_cols=181 Identities=9% Similarity=-0.009 Sum_probs=110.8
Q ss_pred CCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCC----cccceeeccCCcCeEEEEEcCC
Q psy11351 15 NDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRS----REEATELAVNSGPFHAVMFNPV 90 (224)
Q Consensus 15 ~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~~~~~~i~~~~~~~~ 90 (224)
..+.|+..++.+.+..........+..++|++.+..++++-...+.|+.+++.. ......+.........+++.+.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 346788888887766555544456778999987645555656678999999875 2222222221223456888864
Q ss_pred CCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec--CCCcEEEECCCCCcceec-c-cCCcc
Q psy11351 91 EARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR--RLPPVLYNTRSSSPVAQF-D-HEGYY 166 (224)
Q Consensus 91 ~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~v~d~~~~~~~~~~-~-~~~~~ 166 (224)
+++++++-...+.|.++++........+.........++++|.+.+|+.+.. .+.|..+++.... ...+ . .-...
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~P 542 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWP 542 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSC
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCc
Confidence 6677777667788999998754332222222345678899997766665543 2567777665332 2222 1 11122
Q ss_pred cceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCC
Q psy11351 167 NSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 167 ~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 201 (224)
+. ++++|.++.++++-+..+.|..+++...
T Consensus 543 nG-----lavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 543 NG-----ITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CC-----EEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred cE-----EEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 33 6666655677777777889999998654
No 274
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.50 E-value=0.00014 Score=54.17 Aligned_cols=189 Identities=6% Similarity=-0.057 Sum_probs=113.4
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceee-EE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEE
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPID-FY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHA 84 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~-~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~ 84 (224)
+.++.+-...+.|..++++.+.... .. ..-.....+++.+.+.+++++-...+.|.++++........+......-..
T Consensus 47 ~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~g 126 (318)
T 3sov_A 47 GLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRA 126 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEE
T ss_pred CEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccE
Confidence 3444444455667777776553221 22 222456788888755467777777889999998654322222233445689
Q ss_pred EEEcCCCCCeEEEec-CCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeee-cCCCcEEEECCCCCcceec-c
Q psy11351 85 VMFNPVEARLVATAN-SKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNTRSSSPVAQF-D 161 (224)
Q Consensus 85 ~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~~~~~~~~~-~ 161 (224)
++++|.++.++.+-. ..+.|..+++............-.....++++|++..|+.+. ..+.|..+|+.... ...+ .
T Consensus 127 iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~ 205 (318)
T 3sov_A 127 IALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVK 205 (318)
T ss_dssp EEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEC
T ss_pred EEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEec
Confidence 999984444444432 357788888763322222222334568999999877777664 45678888886433 2333 2
Q ss_pred -cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 162 -HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
....... +++. .+.++.+-...+.|..++..+++.
T Consensus 206 ~~~~~P~g-----lav~--~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 206 GSLPHPFA-----LTLF--EDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp SCCSCEEE-----EEEE--TTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCCCceE-----EEEe--CCEEEEEecCCCeEEEEECCCCCc
Confidence 1222222 2232 457777777788999999877764
No 275
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.49 E-value=0.00035 Score=58.44 Aligned_cols=192 Identities=11% Similarity=0.014 Sum_probs=115.2
Q ss_pred ceEEEEEeCCCcEEEEeCCCC----ceeeEEe-ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcC
Q psy11351 7 IKVLRVIGNDDHVISHDMASG----DPIDFYL-HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGP 81 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~----~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 81 (224)
+.++++-...+.|+.+++... .....+. .......|++.+.+.+++++-...+.|.+.++........+......
T Consensus 436 ~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~ 515 (791)
T 3m0c_C 436 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSK 515 (791)
T ss_dssp TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCC
T ss_pred CeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCC
Confidence 344445455566777776642 2222232 34566789998877577778788899999998754433333333445
Q ss_pred eEEEEEcCCCCCeEEEecCC-CcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec-CCCcEEEECCCCCccee
Q psy11351 82 FHAVMFNPVEARLVATANSK-DGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR-RLPPVLYNTRSSSPVAQ 159 (224)
Q Consensus 82 i~~~~~~~~~~~~l~~~~~d-g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~v~d~~~~~~~~~ 159 (224)
...|+++|..+.++++-... +.|...++............-.....|++++.+..|+.+.. .+.|..+++........
T Consensus 516 P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v 595 (791)
T 3m0c_C 516 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 595 (791)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEE
Confidence 78999999445555554333 67888888744332233333457889999988777777653 45688888865433332
Q ss_pred cccCCcc-cceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 160 FDHEGYY-NSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 160 ~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
+...... ..+. ++.. .+.++++-...+.|...+..+++.
T Consensus 596 ~~~~~~l~~P~g---lav~--~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 596 LEDEKRLAHPFS---LAVF--EDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp EECTTTTSSEEE---EEEE--TTEEEEEETTTTEEEEEETTTCCC
T ss_pred ecCCCccCCCCE---EEEe--CCEEEEEECCCCEEEEEeCCCCcc
Confidence 2211111 1111 2222 456777777788999888777754
No 276
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.49 E-value=2.3e-05 Score=65.32 Aligned_cols=188 Identities=9% Similarity=0.016 Sum_probs=102.7
Q ss_pred CC-CcceEEEEEeC-CC----cEEEEeCCCC-ceeeEEeccCCeeEEEEcCCCCcEEEEecCC-----CEEEEEecCCcc
Q psy11351 3 SG-DPIKVLRVIGN-DD----HVISHDMASG-DPIDFYLHERPVYGLSVDPSQDAIFASACDD-----GRVLLFDTRSRE 70 (224)
Q Consensus 3 ~~-~~~~~l~~~~~-dg----~i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~ 70 (224)
++ ++|++||-+.. +| +|+++|+.++ +.+... .......+.|+|++ +.|+....| ..|..+++.+++
T Consensus 181 ~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~-~~~~~~~~~WspDg-~~l~y~~~d~~~~~~~v~~~~lgt~~ 258 (751)
T 2xe4_A 181 PAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK-VSGTNGEIVWGPDH-TSLFYVTKDETLRENKVWRHVMGKLQ 258 (751)
T ss_dssp ECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC-EEEECSCCEECSST-TEEEEEEECTTCCEEEEEEEETTSCG
T ss_pred ecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc-ccCceeeEEEecCC-CEEEEEEECCCCCCCEEEEEECCCCc
Confidence 35 67787774433 33 4999999998 632211 11124578999998 555544443 368888887765
Q ss_pred cc--eeec-cCCcCeEEEEEcCCCCCeEEEec---CCCcEEEEecCCCc-ee--eEeec-CCCceeEEEEcCCCCeEeee
Q psy11351 71 EA--TELA-VNSGPFHAVMFNPVEARLVATAN---SKDGIALYDTRKPK-EV--LMQYG-SCESCMSIRFNKAGTQLLGL 140 (224)
Q Consensus 71 ~~--~~~~-~~~~~i~~~~~~~~~~~~l~~~~---~dg~v~i~d~~~~~-~~--~~~~~-~~~~v~~~~~~~~~~~l~~~ 140 (224)
.. ..+. ........+.|+| ++++|+..+ ....|.++|+.++. .. ..+.. ......++.|+..+.+++..
T Consensus 259 ~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t 337 (751)
T 2xe4_A 259 SEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILT 337 (751)
T ss_dssp GGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEE
T ss_pred hhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEe
Confidence 32 2222 2233467889999 777766544 23458888988652 22 33332 33455556655444444444
Q ss_pred ecC--C--CcEEEECCCC-Ccce-ecccCCcccceeeeEEEEeCCCCeEEEEcCCCCe--EEEEeC
Q psy11351 141 RRR--L--PPVLYNTRSS-SPVA-QFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFV--LYMWRV 198 (224)
Q Consensus 141 ~~d--~--~v~v~d~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~--v~iw~~ 198 (224)
..+ + .|..+++.++ +... .+.+...+ .+..+.+. ++.++++...++. |.++++
T Consensus 338 ~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~---~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 338 NEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDV---FMESIAVR--SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp CTTTCTTCEEEEEETTSTTCCCCEEECCCSSE---EEEEEEEC--SSEEEEEEEETTEEEEEEEEC
T ss_pred CCCCCCCcEEEEEcCCCcccceeeEECCCCCc---EEEEEEEE--CCEEEEEEEeCCEEEEEEEec
Confidence 333 2 4666666543 2222 23332221 22223333 4566677777775 455564
No 277
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.48 E-value=0.00031 Score=57.31 Aligned_cols=192 Identities=7% Similarity=-0.032 Sum_probs=121.4
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeE
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFH 83 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~ 83 (224)
+..+|+-+ ....|+..++++.+..... ..-..+..++|++.+..++.+-..++.|..+++........+........
T Consensus 5 p~~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~ 83 (628)
T 4a0p_A 5 PEAFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE 83 (628)
T ss_dssp CCCEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC
T ss_pred CCcEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc
Confidence 33455554 5678999999876544333 23356889999997756677777789999999875443333332223467
Q ss_pred EEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec--CCCcEEEECCCCCcceecc
Q psy11351 84 AVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR--RLPPVLYNTRSSSPVAQFD 161 (224)
Q Consensus 84 ~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~v~d~~~~~~~~~~~ 161 (224)
.+++++.+++++++-...+.|.+.++............-.....++++|....|+.... .+.|...++..........
T Consensus 84 GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~ 163 (628)
T 4a0p_A 84 GMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP 163 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred eEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC
Confidence 88888745667777777888999998754322222234456789999997666666542 4556667765443322222
Q ss_pred cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 162 HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.-...+. +++.+..+.++++-...+.|..+++.....
T Consensus 164 ~~~~P~G-----lalD~~~~~LY~aD~~~~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 164 NVGRANG-----LTIDYAKRRLYWTDLDTNLIESSNMLGLNR 200 (628)
T ss_dssp SCSSEEE-----EEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCCcce-----EEEccccCEEEEEECCCCEEEEEcCCCCce
Confidence 1122222 555554456666666778888888876543
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.48 E-value=3e-05 Score=60.41 Aligned_cols=190 Identities=10% Similarity=0.054 Sum_probs=109.2
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCC---CE-EEEEecCCcccc--eeeccCCc
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDD---GR-VLLFDTRSREEA--TELAVNSG 80 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---~~-i~iwd~~~~~~~--~~~~~~~~ 80 (224)
++++++ ...+.|+.+|..+++.............+++++++ +++++-... .. +...+.. +... ..+. .-.
T Consensus 153 g~Lyv~-D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG-~lyVad~~~~~~~~gv~~~~~~-~~~~~~~~~~-~~~ 228 (433)
T 4hw6_A 153 DDLYWV-GQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNG-DMVVVDDQSSDTNTGIYLFTRA-SGFTERLSLC-NAR 228 (433)
T ss_dssp CEEEEE-CBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTC-CEEEEECCSCTTSEEEEEECGG-GTTCCEEEEE-ECS
T ss_pred CEEEEE-eCCCCEEEEECCCCEEEEeecCCCCccEEEECCCC-CEEEEcCCCCcccceEEEEECC-CCeecccccc-ccC
Confidence 554444 33388999999887776655555678999999999 555554321 22 3333322 2211 1111 123
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEee--cCCCceeEEEEcCCCCeEeeee-cCCCcEEEECCC--CC
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQY--GSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNTRS--SS 155 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~~--~~ 155 (224)
....++++|.++.++++-..++.|+.+|..++.....+. ........++|+|++++|+.+. ..+.|+.++... +.
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~ 308 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGK 308 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCC
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcc
Confidence 346788888556666676677889999988665422222 1222335699999999666654 456788877652 32
Q ss_pred cc--eec-cc---CCccc------ce-eeeEEEE---------eCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 156 PV--AQF-DH---EGYYN------SC-TMKSCCF---------AGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 156 ~~--~~~-~~---~~~~~------~~-~~~~~~~---------~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
.. ..+ .. .+... .+ .-..+++ .+ ++.++++-...+.|+.++. ++.
T Consensus 309 ~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~-~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 309 LAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEED-EYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp BCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSC-CEEEEEEETTTTEEEEECT-TSE
T ss_pred cCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCC-CCcEEEEECCCCEEEEECC-CCC
Confidence 11 111 11 01000 00 0122555 33 5677777777888988884 443
No 279
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.42 E-value=0.00023 Score=53.29 Aligned_cols=184 Identities=8% Similarity=0.103 Sum_probs=112.5
Q ss_pred eEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCC----CCc--E-EEEecC--CCEEEEEecC--Ccccceeec
Q psy11351 8 KVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPS----QDA--I-FASACD--DGRVLLFDTR--SREEATELA 76 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~----~~~--~-l~s~~~--d~~i~iwd~~--~~~~~~~~~ 76 (224)
.+++.....+-+.+||+ +++.+..+.. +.++.+..-|. +.. + +++.-. +++|.+|++. +++ +..+.
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~ 117 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMT 117 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECS
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecc
Confidence 45666677889999999 7777776633 56777776652 111 2 334444 5899999773 332 33331
Q ss_pred c------CC-cCeEEEEE--cCCCCC-eEEEecCCCcEEEEecCC---C----ceeeEeecCCCceeEEEEcCCCCeEee
Q psy11351 77 V------NS-GPFHAVMF--NPVEAR-LVATANSKDGIALYDTRK---P----KEVLMQYGSCESCMSIRFNKAGTQLLG 139 (224)
Q Consensus 77 ~------~~-~~i~~~~~--~~~~~~-~l~~~~~dg~v~i~d~~~---~----~~~~~~~~~~~~v~~~~~~~~~~~l~~ 139 (224)
. .. ..+..+++ +|..+. +++....+|.+..|++.. + +.+..+ .-.+.+..+...+....|+.
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f-~lgsq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF-KMNSQTEGMAADDEYGRLYI 196 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE-ECSSCEEEEEEETTTTEEEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe-cCCCCcceEEEcCCCCeEEE
Confidence 1 11 45666777 664443 677778889999998842 2 223333 34567889999999999999
Q ss_pred eecCCCcEEEECC-----CCCcceecccC---CcccceeeeEEEEeCCCCe-EEEEcC-CCCeEEEEeCC
Q psy11351 140 LRRRLPPVLYNTR-----SSSPVAQFDHE---GYYNSCTMKSCCFAGTQDE-YVVSGS-DDFVLYMWRVP 199 (224)
Q Consensus 140 ~~~d~~v~v~d~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~l~s~~-~d~~v~iw~~~ 199 (224)
+-++.-|..++.+ +++.+..+... ..+..+++.. .+ +++ +|++.+ .+..+.+||..
T Consensus 197 ~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~---~~-~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 197 AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYY---AA-DGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEE---CG-GGCEEEEEEEGGGTEEEEEESS
T ss_pred ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEe---cC-CCCEEEEEEcCCCCEEEEEECC
Confidence 9888666666744 23344333222 2333333321 12 233 554444 67799999997
No 280
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.38 E-value=2.5e-05 Score=64.10 Aligned_cols=193 Identities=12% Similarity=0.076 Sum_probs=107.6
Q ss_pred cceEEEEEeCCC-----------cEEEEeCCCCceeeEE----eccCCeeEEEEcCCCCcEEEEec-CCCEEEEEecCCc
Q psy11351 6 PIKVLRVIGNDD-----------HVISHDMASGDPIDFY----LHERPVYGLSVDPSQDAIFASAC-DDGRVLLFDTRSR 69 (224)
Q Consensus 6 ~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~ 69 (224)
.+++++.|+.+. .+.+||..+++..... .+.....++++.+++ ++++.|+ .+..+.+||..++
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g-~lyv~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNG-QIVVTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTS-CEEEECSSSTTCEEEEEGGGT
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCC-CEEEeCCCCCCceEEecCcCC
Confidence 678888887543 5889999988754432 233344457788888 7888887 4568999999876
Q ss_pred ccce--eeccCCcCeEEEEEcCCCCCeEEEec-CC-----CcEEEEecCCCceeeEee-----cCCCceeEEEEcCCCCe
Q psy11351 70 EEAT--ELAVNSGPFHAVMFNPVEARLVATAN-SK-----DGIALYDTRKPKEVLMQY-----GSCESCMSIRFNKAGTQ 136 (224)
Q Consensus 70 ~~~~--~~~~~~~~i~~~~~~~~~~~~l~~~~-~d-----g~v~i~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~ 136 (224)
+-.. .+... ..-.+++..+ ++++++.|+ .+ ..+.+||..+.+-. .+. .....-....+..++..
T Consensus 276 ~W~~~~~~~~~-R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~-~~~~~~~~p~~~~~~~~~~~~~~~i 352 (656)
T 1k3i_A 276 SWIPGPDMQVA-RGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT-SLPNAKVNPMLTADKQGLYRSDNHA 352 (656)
T ss_dssp EEEECCCCSSC-CSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEE-EETTSCSGGGCCCCTTGGGTTTCSC
T ss_pred ceeECCCCCcc-ccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCcce-eCCCccccccccccccceeecCCce
Confidence 5322 22211 1223455666 678888887 34 46899999876422 211 00000000122344555
Q ss_pred EeeeecCC---------CcEEEECCCCCcceecc-cCC----cccceeeeEEEEeCCCCeEEEEcCCCC-----------
Q psy11351 137 LLGLRRRL---------PPVLYNTRSSSPVAQFD-HEG----YYNSCTMKSCCFAGTQDEYVVSGSDDF----------- 191 (224)
Q Consensus 137 l~~~~~d~---------~v~v~d~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~l~s~~~d~----------- 191 (224)
++.++.++ .+..||..+........ ... ......-..+.+...++.+++.|+.++
T Consensus 353 yv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 432 (656)
T 1k3i_A 353 WLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAH 432 (656)
T ss_dssp CEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEE
T ss_pred EEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcce
Confidence 55554443 36778887654332221 110 000001112333333688888888543
Q ss_pred eEEEEeCCCCC
Q psy11351 192 VLYMWRVPRDD 202 (224)
Q Consensus 192 ~v~iw~~~~~~ 202 (224)
.+.+||..+.+
T Consensus 433 ~v~~yd~~~~~ 443 (656)
T 1k3i_A 433 IITLGEPGTSP 443 (656)
T ss_dssp EEECCSTTSCC
T ss_pred EEEcCCCCCCC
Confidence 67888877654
No 281
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.37 E-value=1.7e-05 Score=66.20 Aligned_cols=112 Identities=9% Similarity=-0.009 Sum_probs=72.5
Q ss_pred CeeEEEEc-CCCCcEEE-EecC----CCEEEEEecCCc-ccce-eeccCCcCeEEEEEcCCCCCeEEEecCC-----CcE
Q psy11351 38 PVYGLSVD-PSQDAIFA-SACD----DGRVLLFDTRSR-EEAT-ELAVNSGPFHAVMFNPVEARLVATANSK-----DGI 104 (224)
Q Consensus 38 ~v~~~~~~-~~~~~~l~-s~~~----d~~i~iwd~~~~-~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~v 104 (224)
.+...+|+ |+| ++|+ +... ..+|+++|+.++ +.+. .+. .....++|+| +++.|+....+ ..|
T Consensus 175 ~~~~~~~S~PDG-~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~Wsp-Dg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEH-DLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGP-DHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTT-CEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECS-STTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCC-CEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEec-CCCEEEEEEECCCCCCCEE
Confidence 57889999 999 5655 3332 246999999988 6321 121 1134688999 66666555443 257
Q ss_pred EEEecCCCcee--eEee-cCCCceeEEEEcCCCCeEeeeec---CCCcEEEECCCC
Q psy11351 105 ALYDTRKPKEV--LMQY-GSCESCMSIRFNKAGTQLLGLRR---RLPPVLYNTRSS 154 (224)
Q Consensus 105 ~i~d~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~---d~~v~v~d~~~~ 154 (224)
.++++.+++.. ..+. ........+.|+|||++|+..+. ...|+++|+.++
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 88888766422 2222 23345677899999998887653 335888898875
No 282
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.36 E-value=0.00033 Score=52.01 Aligned_cols=145 Identities=10% Similarity=0.038 Sum_probs=100.3
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEE-ec-----c--CCeeEEEE---cCCCCcEEEEec-------------CCCEE
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFY-LH-----E--RPVYGLSV---DPSQDAIFASAC-------------DDGRV 61 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~-----~--~~v~~~~~---~~~~~~~l~s~~-------------~d~~i 61 (224)
.+.++++.-..++|..||...+...... .. . ..+..+.| .|++ .++++.. .+..+
T Consensus 24 ~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g-rL~vv~~~~~af~~~g~~~~g~~~v 102 (334)
T 2p9w_A 24 RQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK-RLFAVMKNAKSFNFADQSSHGASSF 102 (334)
T ss_dssp TTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC-EEEEEEEETTTTCTTSCCSSSCCEE
T ss_pred CCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC-cEEEEEcccccccccccccCCCCEE
Confidence 3556666668999999999866544332 21 1 13689999 5886 6776533 26789
Q ss_pred EEEecC---Ccccceeec--c-----------CCcCeEEEEEcCCCCCeEEEecCC-CcEEEEecCCCceeeEee-c---
Q psy11351 62 LLFDTR---SREEATELA--V-----------NSGPFHAVMFNPVEARLVATANSK-DGIALYDTRKPKEVLMQY-G--- 120 (224)
Q Consensus 62 ~iwd~~---~~~~~~~~~--~-----------~~~~i~~~~~~~~~~~~l~~~~~d-g~v~i~d~~~~~~~~~~~-~--- 120 (224)
..+|+. +++.+.... . .......++..+ +++..++++.. +.|...+.... ....+. .
T Consensus 103 ~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~ 180 (334)
T 2p9w_A 103 HSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGK-TVSTFAWESGN 180 (334)
T ss_dssp EEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCC
T ss_pred EEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCC
Confidence 999999 777654432 1 113488999999 88999988887 88777776533 222222 1
Q ss_pred --CCCceeEEEEcCCCCeEeeeecCCCcEEEECCC
Q psy11351 121 --SCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 121 --~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~ 153 (224)
.....+.++++|+|..|++....+.+..+|+.+
T Consensus 181 ~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 181 GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 122367899999999888887799999999884
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.35 E-value=1.1e-05 Score=66.70 Aligned_cols=190 Identities=11% Similarity=0.010 Sum_probs=109.1
Q ss_pred eEEEEEeCCCcEEEEeCCC----CceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCe
Q psy11351 8 KVLRVIGNDDHVISHDMAS----GDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPF 82 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~----~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i 82 (224)
.++++-...+.|+.+++.+ ......+ ........+++.+.+.+++++-...+.|.++++........+.......
T Consensus 419 ~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P 498 (699)
T 1n7d_A 419 RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKP 498 (699)
T ss_dssp EEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCC
T ss_pred eEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCc
Confidence 3444444567788888765 2222222 1123456788886554666766677899999987544333332222345
Q ss_pred EEEEEcCCCCCeEEEecCC-CcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeee-cCCCcEEEECCCCCcceec
Q psy11351 83 HAVMFNPVEARLVATANSK-DGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 83 ~~~~~~~~~~~~l~~~~~d-g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~~~~~~~~~ 160 (224)
..++++|.++.++++-... +.|..+++............-.....|+|+|++..|+.+. ..+.|..+++........+
T Consensus 499 ~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~ 578 (699)
T 1n7d_A 499 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 578 (699)
T ss_dssp CCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEEC
T ss_pred ceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEE
Confidence 7889998455555554333 6788887753322111122234567899999877666654 4567888888643322222
Q ss_pred ccC---CcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 161 DHE---GYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 161 ~~~---~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
... .....+++ . .+.++++....+.|..++..+++..
T Consensus 579 ~~~~~~~~P~glav-----d--~~~lywtd~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 579 EDEKRLAHPFSLAV-----F--EDKVFWTDIINEAIFSANRLTGSDV 618 (699)
T ss_dssp CCSSSCSSCCCCEE-----E--TTEEEEECSTTTCEEEEETTTEEEE
T ss_pred ecCCcCCCceEeEE-----E--CCEEEEEeCCCCeEEEEEccCCCce
Confidence 211 22223332 2 3467777777889999998777653
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.34 E-value=9.6e-05 Score=58.21 Aligned_cols=145 Identities=8% Similarity=-0.023 Sum_probs=90.8
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEEec----cCCeeEEEE-------cCCCCcEEEEecCCC-------EEEEEecC
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFYLH----ERPVYGLSV-------DPSQDAIFASACDDG-------RVLLFDTR 67 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~v~~~~~-------~~~~~~~l~s~~~d~-------~i~iwd~~ 67 (224)
.++++++-...+.|++.|++++.......- ......++| ++++ ..|+.+...+ .|.+.+..
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G-~~lyvad~~~~~~~~~~~V~~i~r~ 229 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEA-EYMIVAIDYDGKGDESPSVYIIKRN 229 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTT-CEEEEEECCCTTGGGEEEEEEEECC
T ss_pred CCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCC-CEEEEEeCCCCCcccCceEEEEecC
Confidence 455555555557799999998777665522 235899999 9998 5444444332 36666643
Q ss_pred C-cccc-----eeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecC-------CCce-----------eeEee--cC
Q psy11351 68 S-REEA-----TELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTR-------KPKE-----------VLMQY--GS 121 (224)
Q Consensus 68 ~-~~~~-----~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~-------~~~~-----------~~~~~--~~ 121 (224)
. ++.. ..+... .....++++|.++.++++-..++.|..+|+. ++.. ...+. ..
T Consensus 230 ~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~ 308 (496)
T 3kya_A 230 ADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD 308 (496)
T ss_dssp TTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS
T ss_pred CCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCC
Confidence 3 2221 222221 2345778899667777777788889999987 4432 11211 23
Q ss_pred CCceeEEEEcCCCCeEeeee-cCCCcEEEECC
Q psy11351 122 CESCMSIRFNKAGTQLLGLR-RRLPPVLYNTR 152 (224)
Q Consensus 122 ~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~ 152 (224)
......++|+|+|++|+.+. ....|+.++..
T Consensus 309 ~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 309 PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 34568899999999766654 45667776553
No 285
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.32 E-value=0.00016 Score=53.45 Aligned_cols=150 Identities=11% Similarity=-0.015 Sum_probs=88.0
Q ss_pred CCCCcceEEEEEeCCC--cEEEEeCCCCceeeEEec--cCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc-cce---
Q psy11351 2 ASGDPIKVLRVIGNDD--HVISHDMASGDPIDFYLH--ERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE-EAT--- 73 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~--- 73 (224)
+.+.+++++++..... .|..+|..+++....... ......++..+.+ ..+++-..++.|..+|...++ .+.
T Consensus 78 a~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~ 156 (306)
T 2p4o_A 78 AFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEH 156 (306)
T ss_dssp EECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEEC
Confidence 4556677655554322 466777777776544322 2234555555554 556666668899999976542 111
Q ss_pred ------eeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCC-Cce--eeEeecCCCceeEEEEcCCCCeEeeeecCC
Q psy11351 74 ------ELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRK-PKE--VLMQYGSCESCMSIRFNKAGTQLLGLRRRL 144 (224)
Q Consensus 74 ------~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 144 (224)
.....-...+.+ +++++.++++-...+.|..||+.. ++. ...+. .......++++++|+++++....+
T Consensus 157 ~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~ 233 (306)
T 2p4o_A 157 PMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYN 233 (306)
T ss_dssp GGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTC
T ss_pred CccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCC
Confidence 000111233455 663344566666778999999874 211 11111 113456789999998777766778
Q ss_pred CcEEEECCCCCc
Q psy11351 145 PPVLYNTRSSSP 156 (224)
Q Consensus 145 ~v~v~d~~~~~~ 156 (224)
.|.++|.. ++.
T Consensus 234 ~V~~~~~~-G~~ 244 (306)
T 2p4o_A 234 SVVRIAPD-RST 244 (306)
T ss_dssp CEEEECTT-CCE
T ss_pred eEEEECCC-CCE
Confidence 89999975 554
No 286
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.27 E-value=0.0011 Score=55.55 Aligned_cols=182 Identities=9% Similarity=0.031 Sum_probs=111.4
Q ss_pred EEEEeCCCcEEEEeCCCCceeeEE-e--------ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec----
Q psy11351 10 LRVIGNDDHVISHDMASGDPIDFY-L--------HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA---- 76 (224)
Q Consensus 10 l~~~~~dg~i~iwd~~~~~~~~~~-~--------~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---- 76 (224)
|-.|+.++-|..||..+++..... . ....|.++...+++ ++|..|+.++-|..||.++++......
T Consensus 370 lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~ 448 (795)
T 4a2l_A 370 LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK-SLVYIGTHAGGLSILHRNSGQVENFNQRNSQ 448 (795)
T ss_dssp EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT-TEEEEEETTTEEEEEETTTCCEEEECTTTSC
T ss_pred EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC-CEEEEEeCcCceeEEeCCCCcEEEeecCCCC
Confidence 455677777999998877655432 1 13578999988887 645667776779999988765322211
Q ss_pred cCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec-------CCCceeEEEEcCCCCeEeeeecCCCcEEE
Q psy11351 77 VNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG-------SCESCMSIRFNKAGTQLLGLRRRLPPVLY 149 (224)
Q Consensus 77 ~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~v~v~ 149 (224)
.....|.++...+ ++.+.+.. . +.+.+||..+++. ..+.. ....|.++...++|...+... + -+..|
T Consensus 449 l~~~~v~~i~~d~-~g~lwigt-~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~ 522 (795)
T 4a2l_A 449 LVNENVYAILPDG-EGNLWLGT-L-SALVRFNPEQRSF-TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVF 522 (795)
T ss_dssp CSCSCEEEEEECS-SSCEEEEE-S-SCEEEEETTTTEE-EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEE
T ss_pred cCCCeeEEEEECC-CCCEEEEe-c-CceeEEeCCCCeE-EEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEE
Confidence 1245789999887 66655554 4 4588899876533 22221 235788999988887666544 4 48999
Q ss_pred ECCCCCcceecc---cCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 150 NTRSSSPVAQFD---HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 150 d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
|..+++. .+. .......-.+..+...+ ++.+.++. .+ -+..||..+++.
T Consensus 523 ~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigT-~~-Gl~~~d~~~~~~ 574 (795)
T 4a2l_A 523 KQEGLDI--QKASILPVSNVTKLFTNCIYEAS-NGIIWVGT-RE-GFYCFNEKDKQI 574 (795)
T ss_dssp EEETTEE--EECCCSCSCGGGGSCEEEEEECT-TSCEEEEE-SS-CEEEEETTTTEE
T ss_pred eCCCCeE--EEecCCCCCCCCCCeeEEEEECC-CCCEEEEe-CC-CceeECCCCCcE
Confidence 9876654 221 11111112233344444 45544433 33 477888766543
No 287
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.26 E-value=0.00021 Score=53.09 Aligned_cols=161 Identities=9% Similarity=0.120 Sum_probs=102.9
Q ss_pred CCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccce-eecc----CC--cCeEEEEE---cCCCCCeEEEec-------
Q psy11351 37 RPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT-ELAV----NS--GPFHAVMF---NPVEARLVATAN------- 99 (224)
Q Consensus 37 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~----~~--~~i~~~~~---~~~~~~~l~~~~------- 99 (224)
....+++|++....++++.-..++|..||...+.... .+.. .. ..+..+.| .| +++++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTTCT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEcccccccc
Confidence 3456789988653566666689999999987554322 2221 11 13579999 68 677777543
Q ss_pred ------CCCcEEEEecC---CCceeeEee--c-----------CCCceeEEEEcCCCCeEeeeecC-CCcEEEECCCCCc
Q psy11351 100 ------SKDGIALYDTR---KPKEVLMQY--G-----------SCESCMSIRFNKAGTQLLGLRRR-LPPVLYNTRSSSP 156 (224)
Q Consensus 100 ------~dg~v~i~d~~---~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~l~~~~~d-~~v~v~d~~~~~~ 156 (224)
.+..|..||+. +++...... . .......++..++|+..++++.. +.|...+.... .
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-T 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-C
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-E
Confidence 26779999999 665544332 1 11347889999999999988877 77666665533 3
Q ss_pred ceec--ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCC
Q psy11351 157 VAQF--DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 157 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~ 200 (224)
+..+ ..........+.-+.+.| ++..|++...+|.|.-+|+..
T Consensus 171 ~~~~~~~~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 171 VSTFAWESGNGGQRPGYSGITFDP-HSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEEECCCCSSSCCSCSEEEEET-TTTEEEEESSSSSEEEEECSS
T ss_pred EeeeeecCCCcccccCcceEEEeC-CCCEEEEEcCCCeEEEEcCCC
Confidence 3332 111111222234467777 576666655599999999884
No 288
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.23 E-value=0.00062 Score=57.16 Aligned_cols=183 Identities=13% Similarity=0.086 Sum_probs=109.5
Q ss_pred EEEEeCCCcEEEEeCCCCceeeEEe-------ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec------
Q psy11351 10 LRVIGNDDHVISHDMASGDPIDFYL-------HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA------ 76 (224)
Q Consensus 10 l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------ 76 (224)
+-.|+.++-|..++..+++...... ....|.++...+++ + |-.|+.++-|..||..+++......
T Consensus 323 lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g-~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~ 400 (795)
T 4a2l_A 323 MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDK-N-LWIGTNDGGLNLYNPITQRFTSYTLQEDESA 400 (795)
T ss_dssp EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTS-C-EEEEESSSCEEEECTTTCCEEEECCC-----
T ss_pred EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCC-C-EEEEECCCCeEEEcCCCCcEEEEecCCCCcc
Confidence 4556666778888876654332221 24569999998887 4 4446667778889987665322211
Q ss_pred --cCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec-----CCCceeEEEEcCCCCeEeeeecCCCcEEE
Q psy11351 77 --VNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG-----SCESCMSIRFNKAGTQLLGLRRRLPPVLY 149 (224)
Q Consensus 77 --~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~v~v~ 149 (224)
.....|.++...+ ++.+|..|+.++.+..||.++++. ..+.. ....|.++...++|...+.. .+| +.+|
T Consensus 401 ~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~G-l~~~ 476 (795)
T 4a2l_A 401 RGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAILPDGEGNLWLGT-LSA-LVRF 476 (795)
T ss_dssp -CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEEECSSSCEEEEE-SSC-EEEE
T ss_pred cCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEEECCCCCEEEEe-cCc-eeEE
Confidence 1135789999887 666466667777899999887643 22221 24578899988888765544 344 9999
Q ss_pred ECCCCCcceecccC---CcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 150 NTRSSSPVAQFDHE---GYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 150 d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
|..+++.. .+... .......+..+...+ ++.+.+.. . +-|..||..+++
T Consensus 477 ~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt-~-~Gl~~~~~~~~~ 528 (795)
T 4a2l_A 477 NPEQRSFT-TIEKEKDGTPVVSKQITTLFRDS-HKRLWIGG-E-EGLSVFKQEGLD 528 (795)
T ss_dssp ETTTTEEE-ECCBCTTCCBCCCCCEEEEEECT-TCCEEEEE-S-SCEEEEEEETTE
T ss_pred eCCCCeEE-EccccccccccCCceEEEEEECC-CCCEEEEe-C-CceEEEeCCCCe
Confidence 98765432 22111 111111233344444 45554433 3 447778776554
No 289
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.20 E-value=0.00014 Score=59.75 Aligned_cols=181 Identities=13% Similarity=0.070 Sum_probs=101.1
Q ss_pred CcceEEEEEeC-CCcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEec-CC-----CEEEEEecCCccccee-
Q psy11351 5 DPIKVLRVIGN-DDHVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASAC-DD-----GRVLLFDTRSREEATE- 74 (224)
Q Consensus 5 ~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~-~d-----~~i~iwd~~~~~~~~~- 74 (224)
.++++++.|+. +..+.+||..+++....- .....-.++...+++ ++++.|+ .+ ..+.+||..+++-...
T Consensus 252 ~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~ 330 (656)
T 1k3i_A 252 GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLP 330 (656)
T ss_dssp TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTTEEEEET
T ss_pred CCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCC-eEEEEeCcccCCcccccceEeCCCCCcceeCC
Confidence 45778888884 558999999877654332 112222345666777 7888887 34 5688999876542110
Q ss_pred ------ec------------------cCCc---------------------------------------CeEEEEEcCCC
Q psy11351 75 ------LA------------------VNSG---------------------------------------PFHAVMFNPVE 91 (224)
Q Consensus 75 ------~~------------------~~~~---------------------------------------~i~~~~~~~~~ 91 (224)
+. +..+ .-.++.+...+
T Consensus 331 ~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~ 410 (656)
T 1k3i_A 331 NAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVK 410 (656)
T ss_dssp TSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTT
T ss_pred CccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCC
Confidence 00 0000 11233333335
Q ss_pred CCeEEEecCCC-----------cEEEEecCCCceeeEe--e-cCCCceeEEEEcCCCCeEeeeecC-----------CCc
Q psy11351 92 ARLVATANSKD-----------GIALYDTRKPKEVLMQ--Y-GSCESCMSIRFNKAGTQLLGLRRR-----------LPP 146 (224)
Q Consensus 92 ~~~l~~~~~dg-----------~v~i~d~~~~~~~~~~--~-~~~~~v~~~~~~~~~~~l~~~~~d-----------~~v 146 (224)
+++++.|+.++ .+.+||..+..-.... . .....-.++...|+++.++.|+.+ ..+
T Consensus 411 ~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v 490 (656)
T 1k3i_A 411 GKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTP 490 (656)
T ss_dssp TEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCC
T ss_pred CeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccce
Confidence 67788877532 5778887765432221 1 112222445667899999998754 458
Q ss_pred EEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCC
Q psy11351 147 VLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSD 189 (224)
Q Consensus 147 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 189 (224)
.+||..+.+-...-.. .........+.+.| ++++++.|+.
T Consensus 491 ~~ydp~t~~W~~~~~~--~~~R~~hs~a~ll~-dg~v~v~GG~ 530 (656)
T 1k3i_A 491 EIYVPEQDTFYKQNPN--SIVRVYHSISLLLP-DGRVFNGGGG 530 (656)
T ss_dssp EEEEGGGTEEEECCCC--SSCCCTTEEEEECT-TSCEEEEECC
T ss_pred EEEcCCCCceeecCCC--CCccccccHhhcCC-CcEEEecCCC
Confidence 9999876542221111 11111122233445 7889888885
No 290
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.13 E-value=0.0022 Score=52.38 Aligned_cols=188 Identities=9% Similarity=-0.081 Sum_probs=117.6
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEEec-cCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEE
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFYLH-ERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAV 85 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~ 85 (224)
+.++.+-..++.|+.++++.......... ......+++.+.+.+++++-...+.|.+.++........+...-..-..+
T Consensus 49 ~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~i 128 (628)
T 4a0p_A 49 NRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRAL 128 (628)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEE
T ss_pred CEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccE
Confidence 44555555677788888765544433322 24577889887665777777778999999986543222222333456899
Q ss_pred EEcCCCCCeEEEe-cCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeee-cCCCcEEEECCCCCcceec-cc
Q psy11351 86 MFNPVEARLVATA-NSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLR-RRLPPVLYNTRSSSPVAQF-DH 162 (224)
Q Consensus 86 ~~~~~~~~~l~~~-~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~~~~~~~~~-~~ 162 (224)
+++|..+.++.+- +..+.|...++.... ...+...-.....++++++++.|+.+. ..+.|..+|+..... ..+ ..
T Consensus 129 avdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~ 206 (628)
T 4a0p_A 129 ALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADD 206 (628)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEEC
T ss_pred EEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeecc
Confidence 9998455555543 225677777776443 333334456678999999877777765 456788888875443 333 21
Q ss_pred CCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 163 EGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
...... +++. .+.++++-...+.|...|..+++.
T Consensus 207 l~~P~g-----lav~--~~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 207 LPHPFG-----LTQY--QDYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp CSCEEE-----EEEE--TTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCceE-----EEEE--CCEEEEecCCCCEEEEEECCCCCc
Confidence 122222 3333 456777777788999999877754
No 291
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.12 E-value=0.0012 Score=55.32 Aligned_cols=185 Identities=11% Similarity=0.037 Sum_probs=107.2
Q ss_pred EEEEeCCCcEEEEeCCCCceeeEE----eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceee--ccCCcCeE
Q psy11351 10 LRVIGNDDHVISHDMASGDPIDFY----LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATEL--AVNSGPFH 83 (224)
Q Consensus 10 l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~i~ 83 (224)
|-.|+.++-|..||..+++..... .....|.++...+++ .+.+ |+.++-+..+|.++++..... ......|.
T Consensus 376 lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~ 453 (781)
T 3v9f_A 376 LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEG-NLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVR 453 (781)
T ss_dssp EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTS-CEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEE
T ss_pred EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCC-CEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEE
Confidence 445565666888888765433221 134678999888877 4444 666677888998776532221 12345789
Q ss_pred EEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecC-----CCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcce
Q psy11351 84 AVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGS-----CESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVA 158 (224)
Q Consensus 84 ~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~ 158 (224)
++...+ ++.+.+. +. +.+..||..+++........ ...|.++...++|...+....+| +..||..+++. .
T Consensus 454 ~i~~d~-~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~-~ 528 (781)
T 3v9f_A 454 VFYEDK-NKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLV-R 528 (781)
T ss_dssp EEEECT-TSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEE-E
T ss_pred EEEECC-CCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeE-E
Confidence 998887 5555544 44 56889998765432222111 35788999888887655443344 88888766532 2
Q ss_pred ecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 159 QFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.+........-.+..+...+ ++.+.++ +.+|.+..||..+++.
T Consensus 529 ~~~~~~~l~~~~i~~i~~d~-~g~lWi~-T~~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 529 KFNQYEGFCSNTINQIYRSS-KGQMWLA-TGEGLVCFPSARNFDY 571 (781)
T ss_dssp EECTTTTCSCSCEEEEEECT-TSCEEEE-ETTEEEEESCTTTCCC
T ss_pred EccCCCCCCCCeeEEEEECC-CCCEEEE-ECCCceEEECCCCCcE
Confidence 33211111111233344444 4554444 3466558888776643
No 292
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.08 E-value=0.0029 Score=51.63 Aligned_cols=183 Identities=7% Similarity=-0.041 Sum_probs=110.1
Q ss_pred CCCcEEEEeCCCCc--eeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccc-ceeeccCCcCeEEEEEcCCC
Q psy11351 15 NDDHVISHDMASGD--PIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREE-ATELAVNSGPFHAVMFNPVE 91 (224)
Q Consensus 15 ~dg~i~iwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~i~~~~~~~~~ 91 (224)
....|+..++.... .......-.....++|++.+..++.+=...+.|..+++..... ...+.........+++++.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 46789999998653 2223344556889999987645666666678999998875432 22233323467899999855
Q ss_pred CCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec--CCCcEEEECCCCCcceec-c-cCCccc
Q psy11351 92 ARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR--RLPPVLYNTRSSSPVAQF-D-HEGYYN 167 (224)
Q Consensus 92 ~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~v~d~~~~~~~~~~-~-~~~~~~ 167 (224)
++++++-...+.|.+.++............-.....++++|.+.+|+.... .+.|...++.. .....+ . .-...+
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~~l~~~~~~~P~ 174 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIYWPN 174 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSSEE
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-CceEEEEeCCCCCCc
Confidence 667777777889999998754332222234456788999998776666553 34555556553 333333 1 111222
Q ss_pred ceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 168 SCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 168 ~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.+++.+.++.++++-+..+.|..+++.....
T Consensus 175 -----Glald~~~~~LY~aD~~~~~I~~~~~dG~~~ 205 (619)
T 3s94_A 175 -----GLTLDYEEQKLYWADAKLNFIHKSNLDGTNR 205 (619)
T ss_dssp -----EEEEETTTTEEEEEETTTCCEEEESSSCCEE
T ss_pred -----EEEEEccCCEEEEEeCCCCeEEEecCCCCcc
Confidence 3556654566666666777888888875433
No 293
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.00023 Score=55.39 Aligned_cols=155 Identities=10% Similarity=0.036 Sum_probs=90.0
Q ss_pred CeeEEEEcC-CCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEEEEcCCCCCeEEEecC-CC----cEEEEecCC
Q psy11351 38 PVYGLSVDP-SQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANS-KD----GIALYDTRK 111 (224)
Q Consensus 38 ~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg----~v~i~d~~~ 111 (224)
....++++| ++ ..|..+...+.|+.+|...++... +.........++|++ +++.|+.+.. ++ .+..++...
T Consensus 138 ~P~~lavdp~~~-g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNH-NHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETTEE-EEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCCCC-CeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeCCC
Confidence 457889998 34 345554444889999988765333 323345678999999 7774444433 22 233444332
Q ss_pred Cce-eeEeecCCCceeEEEEcC-CCCeEeeeecCCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCe-EEEEcC
Q psy11351 112 PKE-VLMQYGSCESCMSIRFNK-AGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDE-YVVSGS 188 (224)
Q Consensus 112 ~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~ 188 (224)
... ...+. .......++++| ++..+++-..++.|..++..++............ .-..++|+| +++ ++++-.
T Consensus 215 ~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~---~P~gia~~p-dG~~lyv~d~ 289 (430)
T 3tc9_A 215 GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSG---WEFHIQFHP-SGNYAYIVVV 289 (430)
T ss_dssp TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSS---CCEEEEECT-TSSEEEEEET
T ss_pred ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCC---cceeEEEcC-CCCEEEEEEC
Confidence 111 11121 233457788999 5665555556678999998765432222111110 112377777 576 666667
Q ss_pred CCCeEEEEeCCC
Q psy11351 189 DDFVLYMWRVPR 200 (224)
Q Consensus 189 ~d~~v~iw~~~~ 200 (224)
..+.|..++...
T Consensus 290 ~~~~I~~~~~d~ 301 (430)
T 3tc9_A 290 NQHYILRSDYDW 301 (430)
T ss_dssp TTTEEEEEEEET
T ss_pred CCCEEEEEeCCc
Confidence 788999987654
No 294
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.03 E-value=0.0024 Score=53.52 Aligned_cols=185 Identities=10% Similarity=0.028 Sum_probs=105.5
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceeeEEe---ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccC----
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPIDFYL---HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVN---- 78 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~---- 78 (224)
.+. |-.|+.++-+..+|..+++...... ....|.++...+++ .+.+ |+. +-+..+|..+++........
T Consensus 417 ~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~ 492 (781)
T 3v9f_A 417 EGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNK-KIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQL 492 (781)
T ss_dssp TSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTS-EEEE-EET-TEEEEEESSSSSCCEEECTTTSSC
T ss_pred CCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCC-CEEE-EEC-CceEEEeCCCCeEEecccCccccc
Confidence 444 3446666678888887765543321 34678999988887 4444 444 56888998776543222111
Q ss_pred -CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec----CCCceeEEEEcCCCCeEeeeecCCCcEEEECCC
Q psy11351 79 -SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG----SCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 79 -~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~ 153 (224)
...|.++...+ ++.+.+.. .++.+..||..+.+ ...+.. ....|.++...++|...+.. .+|-+..||..+
T Consensus 493 ~~~~i~~i~~d~-~g~lWigt-~~~Gl~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~ 568 (781)
T 3v9f_A 493 LENFVRSIAQDS-EGRFWIGT-FGGGVGIYTPDMQL-VRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARN 568 (781)
T ss_dssp SCSCEEEEEECT-TCCEEEEE-SSSCEEEECTTCCE-EEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTT
T ss_pred ccceeEEEEEcC-CCCEEEEE-cCCCEEEEeCCCCe-EEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCC
Confidence 35789999888 66655544 44457788887653 333321 23568889888888765544 366438888776
Q ss_pred CCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 154 SSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
++. ..+........-.+..+...+ ++.+.++ +.+| |..|+..+++
T Consensus 569 ~~~-~~~~~~~gl~~~~i~~i~~d~-~g~lW~~-t~~G-l~~~~~~~~~ 613 (781)
T 3v9f_A 569 FDY-QVFQRKEGLPNTHIRAISEDK-NGNIWAS-TNTG-ISCYITSKKC 613 (781)
T ss_dssp CCC-EEECGGGTCSCCCCCEEEECS-SSCEEEE-CSSC-EEEEETTTTE
T ss_pred CcE-EEccccCCCCCceEEEEEECC-CCCEEEE-cCCc-eEEEECCCCc
Confidence 542 333211111111122233433 4555444 3444 6666766543
No 295
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.00 E-value=0.002 Score=50.22 Aligned_cols=161 Identities=12% Similarity=0.101 Sum_probs=92.8
Q ss_pred cCCeeEEEEcC-CCCcEEEEecCCCEEEEEecCCcccceee-c-cCCcCeEEEEEcCCCCC-eEEEecCCCcEEEEecCC
Q psy11351 36 ERPVYGLSVDP-SQDAIFASACDDGRVLLFDTRSREEATEL-A-VNSGPFHAVMFNPVEAR-LVATANSKDGIALYDTRK 111 (224)
Q Consensus 36 ~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~-~~~~~i~~~~~~~~~~~-~l~~~~~dg~v~i~d~~~ 111 (224)
......++++| ++ .++++-..++.|+.+|..++.....+ . .....-..++|+| +++ ++++-...+.|..++...
T Consensus 227 ~~~P~giavd~~~G-~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dp-dG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 227 ARGAKTCAVHPQNG-KIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHP-TGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp CSSBCCCEECTTTC-CEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECT-TSSEEEEEETTTTEEEEEEBCT
T ss_pred cCCCCEEEEeCCCC-eEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeC-CCCEEEEEeCCCCEEEEEeCCC
Confidence 34567789999 55 67777777889999998866542222 1 1122235799999 666 566666678899988652
Q ss_pred --Cce--eeEeecC---------------CCceeEEEE---------cCCCCeEeeeecCCCcEEEECCCCCcceecccC
Q psy11351 112 --PKE--VLMQYGS---------------CESCMSIRF---------NKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHE 163 (224)
Q Consensus 112 --~~~--~~~~~~~---------------~~~v~~~~~---------~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~ 163 (224)
+.. +..+.+. -.....+++ .++|.+.++-...+.|+.++. ++.........
T Consensus 305 ~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g 383 (433)
T 4hw6_A 305 ETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRG 383 (433)
T ss_dssp TTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCC
T ss_pred CCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCC
Confidence 211 1122111 123567888 666766666556677888875 44332222211
Q ss_pred -----Ccccc-------e-eeeEEEEeCCCCeEEEEcCCCCeEEEEeCC
Q psy11351 164 -----GYYNS-------C-TMKSCCFAGTQDEYVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 164 -----~~~~~-------~-~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~ 199 (224)
+.... + .-..+++.|.++.++++=..+++|+.++++
T Consensus 384 ~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 384 NSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 10000 0 122356664356666666666777776653
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.99 E-value=0.0021 Score=48.20 Aligned_cols=142 Identities=11% Similarity=0.174 Sum_probs=93.8
Q ss_pred CCcEEEEeC--CCCceeeEEe-------cc-CCeeEEEE--cCCC-CcEEEEecCCCEEEEEecC-------Ccccceee
Q psy11351 16 DDHVISHDM--ASGDPIDFYL-------HE-RPVYGLSV--DPSQ-DAIFASACDDGRVLLFDTR-------SREEATEL 75 (224)
Q Consensus 16 dg~i~iwd~--~~~~~~~~~~-------~~-~~v~~~~~--~~~~-~~~l~s~~~d~~i~iwd~~-------~~~~~~~~ 75 (224)
+++|++|++ .+++ +...+ .. ..+..+++ +|.. ..+++....+|.+..|++. +.+.++++
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 578999976 3443 33331 12 56777888 7754 2368888889999999983 33456666
Q ss_pred ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecC-----CCceeeEee-c-CCCceeEEEE--cCCCC-eEeeee-cCC
Q psy11351 76 AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTR-----KPKEVLMQY-G-SCESCMSIRF--NKAGT-QLLGLR-RRL 144 (224)
Q Consensus 76 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~-----~~~~~~~~~-~-~~~~v~~~~~--~~~~~-~l~~~~-~d~ 144 (224)
.. .+.+..|...+ ....|+.+-++..|..||.+ +.+.+.... + ....+..|++ .++++ +|++++ .++
T Consensus 177 ~l-gsq~EgcvvDd-~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~ 254 (355)
T 3amr_A 177 KM-NSQTEGMAADD-EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS 254 (355)
T ss_dssp EC-SSCEEEEEEET-TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred cC-CCCcceEEEcC-CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence 54 45788999998 77788888888777777755 222222221 1 2246788887 45555 677766 567
Q ss_pred CcEEEECC-CCCcceec
Q psy11351 145 PPVLYNTR-SSSPVAQF 160 (224)
Q Consensus 145 ~v~v~d~~-~~~~~~~~ 160 (224)
+..+||.+ +.+.+..|
T Consensus 255 s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 255 SYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEEEESSTTCCEEEEE
T ss_pred EEEEEECCCCCcEEEEE
Confidence 89999996 56666666
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.96 E-value=0.0025 Score=46.79 Aligned_cols=184 Identities=10% Similarity=0.000 Sum_probs=96.2
Q ss_pred cceEEEEEeCC-----CcEEEEeCCCCc---eeeEE--eccCCeeEEEEcCCCCcEEEEecCC-----CEEEEEecCCcc
Q psy11351 6 PIKVLRVIGND-----DHVISHDMASGD---PIDFY--LHERPVYGLSVDPSQDAIFASACDD-----GRVLLFDTRSRE 70 (224)
Q Consensus 6 ~~~~l~~~~~d-----g~i~iwd~~~~~---~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~ 70 (224)
.+++++.|+.+ ..+.+||+.+.+ ....- .....-.++... ++ .+++.|+.+ ..+.+||..+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL-GD-MIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE-CC-EEEEEcccCCCcccceEEEEcCCCCe
Confidence 35667777755 368899998876 43322 111111122222 34 677777643 468889987765
Q ss_pred cc--eeeccCCcCeEEEEEcCCCCCeEEEecCC-----CcEEEEecCCCceeeEeec---CCCceeEEEEcCCCCeEeee
Q psy11351 71 EA--TELAVNSGPFHAVMFNPVEARLVATANSK-----DGIALYDTRKPKEVLMQYG---SCESCMSIRFNKAGTQLLGL 140 (224)
Q Consensus 71 ~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~ 140 (224)
-. ..+......-..+.+ ++.+++.|+.+ ..+.+||+.+.+-. .... .......+.+ +++.++.|
T Consensus 140 W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~--~~~i~v~G 213 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA---SGVIYCLGGYDGLNILNSVEKYDPHTGHWT-NVTPMATKRSGAGVALL--NDHIYVVG 213 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred EEECCCCCCCcccceEEEE---CCEEEEECCCCCCcccceEEEEeCCCCcEE-eCCCCCcccccceEEEE--CCEEEEEe
Confidence 22 122111112222222 45677777654 35889998876322 2211 1111122222 45666666
Q ss_pred ecC-----CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCC-----CeEEEEeCCCCC
Q psy11351 141 RRR-----LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDD-----FVLYMWRVPRDD 202 (224)
Q Consensus 141 ~~d-----~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~v~iw~~~~~~ 202 (224)
+.+ ..+.+||+.+.+-...-........ .. ++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 214 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~--~~-~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY--VG-ATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS--CE-EEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCCCcccceEEEEeCCCCcEEECCCCCCcccc--ee-EEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 653 4588999987643322111111111 11 1122 67788888765 468899988764
No 298
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.94 E-value=0.0018 Score=47.57 Aligned_cols=186 Identities=13% Similarity=0.056 Sum_probs=94.7
Q ss_pred cceEEEEEeCCC-----cEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCC-----CEEEEEecCCcccc-
Q psy11351 6 PIKVLRVIGNDD-----HVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDD-----GRVLLFDTRSREEA- 72 (224)
Q Consensus 6 ~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~- 72 (224)
.+.+++.|+.++ .+.+||..+.+....- .....-.+++.. ++ .+++.|+.+ ..+.+||+.+.+-.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL-NG-LLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT-EEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE-CC-EEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 345677776543 5888898877644332 111111122222 34 677777655 35778888766522
Q ss_pred -eeeccCCcCeEEEEEcCCCCCeEEEecCC-------CcEEEEecCCCceeeE--eecCCCceeEEEEcCCCCeEeeeec
Q psy11351 73 -TELAVNSGPFHAVMFNPVEARLVATANSK-------DGIALYDTRKPKEVLM--QYGSCESCMSIRFNKAGTQLLGLRR 142 (224)
Q Consensus 73 -~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-------g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~ 142 (224)
..+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-... ..........+.+ +++.++.|+.
T Consensus 139 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 213 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV---GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGH 213 (302)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred cCCCCCcccCceEEEE---CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCC
Confidence 112111112222222 45677776542 3488999887632211 1111111122222 5666677665
Q ss_pred C-----CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCC-----eEEEEeCCCCCe
Q psy11351 143 R-----LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDF-----VLYMWRVPRDDI 203 (224)
Q Consensus 143 d-----~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-----~v~iw~~~~~~~ 203 (224)
+ ..+.+||+.+.+-...-........ .. ++.. ++.+++.|+.++ .+.+||+.+.+-
T Consensus 214 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~--~~-~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNAWRQVADMNMCRRN--AG-VCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp SSSSBCCCEEEEETTTTEEEEECCCSSCCBS--CE-EEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCcccceEEEEeCCCCCEeeCCCCCCcccc--Ce-EEEE--CCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 4 3588999887543322111111111 11 1121 678888887653 589999987643
No 299
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.91 E-value=0.0019 Score=47.54 Aligned_cols=186 Identities=10% Similarity=-0.022 Sum_probs=96.3
Q ss_pred cceEEEEEeCC----CcEEEEeCCCCceeeEEe--ccCCeeEEEEcCCCCcEEEEecCC------CEEEEEecCCcccce
Q psy11351 6 PIKVLRVIGND----DHVISHDMASGDPIDFYL--HERPVYGLSVDPSQDAIFASACDD------GRVLLFDTRSREEAT 73 (224)
Q Consensus 6 ~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~ 73 (224)
.+.+++.|+.+ ..+.+||..+++....-. ....-.++... ++ .+++.|+.+ ..+.+||..+.+-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA-EG-KIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE-TT-EEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE-CC-EEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 34567777754 568889998876544331 11111122222 34 677777765 468889988765221
Q ss_pred --eeccCCcCeEEEEEcCCCCCeEEEecC---------CCcEEEEecCCCceeeEeec--CCCceeEEEEcCCCCeEeee
Q psy11351 74 --ELAVNSGPFHAVMFNPVEARLVATANS---------KDGIALYDTRKPKEVLMQYG--SCESCMSIRFNKAGTQLLGL 140 (224)
Q Consensus 74 --~~~~~~~~i~~~~~~~~~~~~l~~~~~---------dg~v~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~ 140 (224)
.+......-..+.+ ++.+++.|+. -..+.+||+.+.+- ..+.. ....-.++... +++.++.|
T Consensus 133 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~-~~~i~v~G 207 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA---NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW-TELCPMIEARKNHGLVFV-KDKIFAVG 207 (306)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCEESCTTTCEECCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE-TTEEEEEC
T ss_pred CCCCcCCcceeEEEEE---CCEEEEECCCCCCCCcccccceEEEeCCCCCeE-EECCCccchhhcceEEEE-CCEEEEEe
Confidence 12111111222222 4567777653 34588999987632 22221 11111122222 55666666
Q ss_pred ecC-----CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCC-----CeEEEEeCCCCCe
Q psy11351 141 RRR-----LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDD-----FVLYMWRVPRDDI 203 (224)
Q Consensus 141 ~~d-----~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~v~iw~~~~~~~ 203 (224)
+.+ ..+.+||+.+.+-...-........ ...+.+ ++.+++.|+.+ ..+.+||+.+.+-
T Consensus 208 G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 208 GQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVT--VKCAAV---GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp CEETTEEBCCEEEEETTTTEEEECCCCSCCBSC--CEEEEE---TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred CCCCCCCCceEEEeeCCCCcEEECCCCCCCccc--eeEEEE---CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 543 4588999887543222111111111 111222 67788888744 5788999988643
No 300
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.90 E-value=0.0025 Score=46.79 Aligned_cols=184 Identities=14% Similarity=0.044 Sum_probs=95.1
Q ss_pred ceEEEEEe-CC-----CcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCC-----CEEEEEecCCcc---
Q psy11351 7 IKVLRVIG-ND-----DHVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDD-----GRVLLFDTRSRE--- 70 (224)
Q Consensus 7 ~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~--- 70 (224)
+.+++.|+ .+ ..+.+||+.+++....- .....-.++.. .++ .+++.|+.+ ..+.+||..+++
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~-~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS-LHD-RIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETT-EEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE-ECC-EEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 45677777 33 36889999877644322 11111112222 234 677777755 468899988765
Q ss_pred cc--eeeccCCcCeEEEEEcCCCCCeEEEecCC-----CcEEEEecCCCceeeE--eecCCCceeEEEEcCCCCeEeeee
Q psy11351 71 EA--TELAVNSGPFHAVMFNPVEARLVATANSK-----DGIALYDTRKPKEVLM--QYGSCESCMSIRFNKAGTQLLGLR 141 (224)
Q Consensus 71 ~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~ 141 (224)
-. ..+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-... ..........+.+ +++.++.|+
T Consensus 93 W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 167 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTL---GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGG 167 (301)
T ss_dssp CEEECCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECC
T ss_pred eEECCCCCCCccceeEEEE---CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECC
Confidence 21 112111122222222 45677777644 3588899887642211 1111111122222 566666666
Q ss_pred cC-----CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCC-----CeEEEEeCCCCC
Q psy11351 142 RR-----LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDD-----FVLYMWRVPRDD 202 (224)
Q Consensus 142 ~d-----~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~v~iw~~~~~~ 202 (224)
.+ ..+.+||+.+.+-...-.......... +... ++.+++.|+.+ ..+.+||+.+.+
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~---~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAG---VALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCE---EEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCcccceEEEEeCCCCcEEeCCCCCcccccce---EEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 44 458889987764332211111111111 1111 67888888764 468899988764
No 301
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.88 E-value=0.0038 Score=47.98 Aligned_cols=132 Identities=11% Similarity=0.189 Sum_probs=88.4
Q ss_pred CCcEEEEeCCCCceeeEEecc-----CCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc----------cc--eeecc-
Q psy11351 16 DDHVISHDMASGDPIDFYLHE-----RPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE----------EA--TELAV- 77 (224)
Q Consensus 16 dg~i~iwd~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----------~~--~~~~~- 77 (224)
++.||.-++......+.+... ..+..+..+|+| ++||..+ +..|.|-.+..+. .+ +.+.-
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCC-CEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcC
Confidence 567888888755444444222 268889999999 7888876 4688888876321 01 12211
Q ss_pred -----CCcCeEEEEEcCCC--CCeEEEecCCCcEEEEecCCCc-eeeEee---------cCCCceeEEEEcCCCCeEeee
Q psy11351 78 -----NSGPFHAVMFNPVE--ARLVATANSKDGIALYDTRKPK-EVLMQY---------GSCESCMSIRFNKAGTQLLGL 140 (224)
Q Consensus 78 -----~~~~i~~~~~~~~~--~~~l~~~~~dg~v~i~d~~~~~-~~~~~~---------~~~~~v~~~~~~~~~~~l~~~ 140 (224)
...+|..+.|||.. +..|++-..|+.|++||+.... .+..+. .....|.+++|.+++-.|...
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl 197 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCL 197 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEE
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEE
Confidence 24679999999953 3478888899999999998522 222111 133678899999988877775
Q ss_pred e--cCCCcEEE
Q psy11351 141 R--RRLPPVLY 149 (224)
Q Consensus 141 ~--~d~~v~v~ 149 (224)
+ ..|.|+-.
T Consensus 198 ~~t~~GDIYAl 208 (452)
T 3pbp_A 198 NTTEGGDIFAF 208 (452)
T ss_dssp ECTTSCEEEEE
T ss_pred ecCCCCCEEEE
Confidence 5 66766543
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.87 E-value=0.0041 Score=46.43 Aligned_cols=152 Identities=13% Similarity=0.070 Sum_probs=84.0
Q ss_pred eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceee-ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCC
Q psy11351 34 LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATEL-AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKP 112 (224)
Q Consensus 34 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~ 112 (224)
.....+..+.+.|++ .+++.+...+..+-+|-. ++.-..+ ......+..+.+.+ ++.+++.+ .+|.+.+.+...+
T Consensus 160 ~~~~~~~~~~~~~~~-~~~~~g~~G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~-~g~~~~~~-~~G~~~~s~~D~G 235 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSG-EYVAVSSRGSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTP-DGRLWMIV-NGGKIAFSDPDNS 235 (327)
T ss_dssp SCCCCEEEEEECTTS-CEEEEETTSSEEEEECTT-CSSCEEEECCSSSCEEEEEECT-TSCEEEEE-TTTEEEEEETTEE
T ss_pred CCCcceEEEEEcCCC-cEEEEECCCcEEEEeCCC-CCceeECCCCCCCccceeEECC-CCCEEEEe-CCceEEEecCCCC
Confidence 445678999999987 677776654444444421 2211111 23345788999988 66666554 5677776642222
Q ss_pred ceeeEee----cCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceecc----cCCcccceeeeEEEEeCCCCeEE
Q psy11351 113 KEVLMQY----GSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFD----HEGYYNSCTMKSCCFAGTQDEYV 184 (224)
Q Consensus 113 ~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l 184 (224)
+.-.... .....+..+.+.+++..++++. ++.+ .+....++.-..+. ....+.. +.|.+ ++. +
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~-----v~~~~-~~~-~ 306 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYK-----ILFFS-PDQ-G 306 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCE-----EEEEE-TTE-E
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEE-----EEEEC-CCc-e
Confidence 2211111 1223578899998777666554 5655 44555554443332 1233343 44433 455 4
Q ss_pred EEcCCCCeEEEEeC
Q psy11351 185 VSGSDDFVLYMWRV 198 (224)
Q Consensus 185 ~s~~~d~~v~iw~~ 198 (224)
++++.+|.|.-++-
T Consensus 307 ~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 307 FILGQKGILLRYVT 320 (327)
T ss_dssp EEECSTTEEEEECC
T ss_pred EEEcCCceEEEEcC
Confidence 55567887776653
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.78 E-value=0.0063 Score=45.96 Aligned_cols=135 Identities=10% Similarity=0.084 Sum_probs=81.4
Q ss_pred CCCcEEEEeCCCC--ceee--EEe-----ccCCeeEEEEcC--CCCcEEEEe-cC--CCEEEEEecCCccc----ceeec
Q psy11351 15 NDDHVISHDMASG--DPID--FYL-----HERPVYGLSVDP--SQDAIFASA-CD--DGRVLLFDTRSREE----ATELA 76 (224)
Q Consensus 15 ~dg~i~iwd~~~~--~~~~--~~~-----~~~~v~~~~~~~--~~~~~l~s~-~~--d~~i~iwd~~~~~~----~~~~~ 76 (224)
.+|.|.++|.++. +... ..+ .......+.+.+ ++..+|+.+ .. +.+|.+|++..+.. +..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 7999999999743 3222 112 224677888766 342234433 32 56888888765432 22332
Q ss_pred cC-CcCeEEEEEcCCCCCeEEEec-----------------CCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEe
Q psy11351 77 VN-SGPFHAVMFNPVEARLVATAN-----------------SKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLL 138 (224)
Q Consensus 77 ~~-~~~i~~~~~~~~~~~~l~~~~-----------------~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 138 (224)
+. -...+++.+.+ ++.++++.. ..|.|.-+|.. ........-...+.++|+||++.|+
T Consensus 161 g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~---~~~~~~~~l~~pNGia~spDg~~lY 236 (355)
T 3sre_A 161 HKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN---DVRVVAEGFDFANGINISPDGKYVY 236 (355)
T ss_dssp CTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT---CCEEEEEEESSEEEEEECTTSSEEE
T ss_pred cCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC---eEEEeecCCcccCcceECCCCCEEE
Confidence 22 23578999999 777777653 12455555543 2222222334568899999999887
Q ss_pred eee-cCCCcEEEECCC
Q psy11351 139 GLR-RRLPPVLYNTRS 153 (224)
Q Consensus 139 ~~~-~d~~v~v~d~~~ 153 (224)
.+. ..+.|+.|++..
T Consensus 237 vadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 237 IAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEGGGTEEEEEEECT
T ss_pred EEeCCCCeEEEEEECC
Confidence 765 467799999864
No 304
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.69 E-value=0.006 Score=44.75 Aligned_cols=185 Identities=11% Similarity=0.055 Sum_probs=94.2
Q ss_pred cceEEEEEeCC----CcEEEEeCCCCceeeEEe--ccCCeeEEEEcCCCCcEEEEecCC-----CEEEEEecCCcccc--
Q psy11351 6 PIKVLRVIGND----DHVISHDMASGDPIDFYL--HERPVYGLSVDPSQDAIFASACDD-----GRVLLFDTRSREEA-- 72 (224)
Q Consensus 6 ~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~-- 72 (224)
++.+++.|+.+ ..+..||+.+.+....-. ....-.++... ++ .+++.|+.+ ..+.+||..+.+-.
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM-AG-LVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT-EEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE-CC-EEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 45677777754 358899998776443321 11111122222 34 677777754 35788898776522
Q ss_pred eeeccCCcCeEEEEEcCCCCCeEEEecCCC-----cEEEEecCCCceeeEeec--CCCceeEEEEcCCCCeEeeeecC--
Q psy11351 73 TELAVNSGPFHAVMFNPVEARLVATANSKD-----GIALYDTRKPKEVLMQYG--SCESCMSIRFNKAGTQLLGLRRR-- 143 (224)
Q Consensus 73 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-----~v~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-- 143 (224)
..+.........+.+ ++.+++.|+.++ .+.+||+.+.+- ..... ....-.+++. -+++.++.|+.+
T Consensus 93 ~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~ 167 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVL---NGLLYAVGGFDGSTGLSSVEAYNIKSNEW-FHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVA 167 (302)
T ss_dssp CCCSSCCBSCEEEEE---TTEEEEEEEECSSCEEEEEEEEETTTTEE-EEECCCSSCCBSCEEEE-ETTEEEEECCEETT
T ss_pred CCCCccccceEEEEE---CCEEEEEcCCCCCccCceEEEEeCCCCeE-eecCCCCCcccCceEEE-ECCEEEEEeCCCCC
Confidence 122211122222222 456777776553 477889876642 22211 1111112222 245666666542
Q ss_pred -----CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCC-----CeEEEEeCCCCC
Q psy11351 144 -----LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDD-----FVLYMWRVPRDD 202 (224)
Q Consensus 144 -----~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~v~iw~~~~~~ 202 (224)
..+.+||+.+.+-...-......... .++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 168 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~---~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 168 SRQCLSTVECYNATTNEWTYIAEMSTRRSGA---GVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp TTEECCCEEEEETTTTEEEEECCCSSCCBSC---EEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred CCccccEEEEEeCCCCcEEECCCCccccccc---cEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 34788998765432221111111111 11121 67888888764 368899988764
No 305
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.0034 Score=47.04 Aligned_cols=193 Identities=9% Similarity=0.025 Sum_probs=105.4
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEEecc--CCeeEEEEc--CCCCcEEEEe-cCCCEEEEEecCCcccceeecc----
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFYLHE--RPVYGLSVD--PSQDAIFASA-CDDGRVLLFDTRSREEATELAV---- 77 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~~--~~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~---- 77 (224)
+.+++.++.||.|.-+|.++|+.+..+... .++....-. +.+...++.. ..||.+..++..+|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 458899999999999999999998887433 233221100 1121344443 6899999999988854433321
Q ss_pred CCcCeEE---EEE-----cCCCCCeEEEecCCCcEEEEecCCCceeeEeecCC--Cc-----eeEEEEc-----CCCCeE
Q psy11351 78 NSGPFHA---VMF-----NPVEARLVATANSKDGIALYDTRKPKEVLMQYGSC--ES-----CMSIRFN-----KAGTQL 137 (224)
Q Consensus 78 ~~~~i~~---~~~-----~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~--~~-----v~~~~~~-----~~~~~l 137 (224)
...++.. ..+ .. .+..+++|+.+|.+.-.|+++++.+..+.... .. ..|.... ..+..+
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~-~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIV-EDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp TTCSEEEECC-----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eccccccCCCceeecccccc-cCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 1122221 000 00 34578899999999999999998877765321 10 1111111 124567
Q ss_pred eeeecCCCcEEEECCCCCcceecccC---Ccccceeee-EEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 138 LGLRRRLPPVLYNTRSSSPVAQFDHE---GYYNSCTMK-SCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 138 ~~~~~d~~v~v~d~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+.+..+..+.+.+ ++|+ +..+... .......+. .-..+. ++.+ +.++.||.|.-+|..+|+..
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~-Dg~~-~~~~~dg~v~A~d~~~G~~~ 235 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSK-DGMC-IAPFRDKSLLASDLDFRIAR 235 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCS-SSCC-EEEETTTEEEEECSTTCCEE
T ss_pred EEecceEEEEEEC-CCCC-eEEEeccccccccccccccccccccc-CCcE-EEECCCCEEEEEECCCCcEE
Confidence 7777777777766 4453 3222100 000000000 000000 3444 44677888888888877653
No 306
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.62 E-value=0.004 Score=46.07 Aligned_cols=184 Identities=10% Similarity=0.050 Sum_probs=91.8
Q ss_pred cceEEEEEeC-----C------CcEEEEeCCCCceeeEEeccCC--eeEEEEcCCCCcEEEEecCC--------CEEEEE
Q psy11351 6 PIKVLRVIGN-----D------DHVISHDMASGDPIDFYLHERP--VYGLSVDPSQDAIFASACDD--------GRVLLF 64 (224)
Q Consensus 6 ~~~~l~~~~~-----d------g~i~iwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~s~~~d--------~~i~iw 64 (224)
.+++++.|+. . ..+..||..+++....-.-..+ -.+++.. ++ .+++.|+.+ ..+.+|
T Consensus 45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-LN-SIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-TT-EEEEECCEESSTTCCBCCCEEEE
T ss_pred CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-CC-EEEEEeCCcCCCCCcccceEEEE
Confidence 4567777773 1 1277888887764332211111 1112222 34 677777742 458889
Q ss_pred ecCCccc--ceeeccCCcCeEEEEEcCCCCCeEEEecC-C-----CcEEEEecCCCceeeEeec---CCCceeEEEEcCC
Q psy11351 65 DTRSREE--ATELAVNSGPFHAVMFNPVEARLVATANS-K-----DGIALYDTRKPKEVLMQYG---SCESCMSIRFNKA 133 (224)
Q Consensus 65 d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d-----g~v~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~ 133 (224)
|..+.+- +..+......-..+.+ ++.+++.|+. + ..+.+||+.+.+- ..... .......+.+ +
T Consensus 123 d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~ 196 (315)
T 4asc_A 123 DRLSFKWGESDPLPYVVYGHTVLSH---MDLVYVIGGKGSDRKCLNKMCVYDPKKFEW-KELAPMQTARSLFGATVH--D 196 (315)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCTTSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--T
T ss_pred CCCCCcEeECCCCCCcccceeEEEE---CCEEEEEeCCCCCCcccceEEEEeCCCCeE-EECCCCCCchhceEEEEE--C
Confidence 9887642 1222211122222222 4567777765 2 3588999887632 11111 1111122222 5
Q ss_pred CCeEeeeecCC-----CcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCC--------------CeEE
Q psy11351 134 GTQLLGLRRRL-----PPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDD--------------FVLY 194 (224)
Q Consensus 134 ~~~l~~~~~d~-----~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d--------------~~v~ 194 (224)
++.++.|+.++ .+.+||+.+.+-...-........ .. ++.. ++.+++.|+.+ ..+.
T Consensus 197 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~-~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~ 271 (315)
T 4asc_A 197 GRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSS--LS-LVSL--VGTLYAIGGFATLETESGELVPTELNDIW 271 (315)
T ss_dssp TEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBS--CE-EEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccc--ee-EEEE--CCEEEEECCccccCcCCccccccccCcEE
Confidence 66777776544 478889877643222111111111 11 1111 57777777753 2477
Q ss_pred EEeCCCCC
Q psy11351 195 MWRVPRDD 202 (224)
Q Consensus 195 iw~~~~~~ 202 (224)
+||+.+.+
T Consensus 272 ~yd~~~~~ 279 (315)
T 4asc_A 272 RYNEEEKK 279 (315)
T ss_dssp EEETTTTE
T ss_pred EecCCCCh
Confidence 88988764
No 307
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.62 E-value=0.0073 Score=44.50 Aligned_cols=183 Identities=11% Similarity=-0.008 Sum_probs=93.3
Q ss_pred ceEEEEEeC----C-----CcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCC-----CEEEEEecCCcc
Q psy11351 7 IKVLRVIGN----D-----DHVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDD-----GRVLLFDTRSRE 70 (224)
Q Consensus 7 ~~~l~~~~~----d-----g~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~ 70 (224)
+++++.|+. + ..+.+||+.+.+....- .....-.++... ++ ++++.|+.+ ..+.+||..+.+
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI-DG-HIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE-TT-EEEEECCEETTEECCCEEEEETTTTE
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE-CC-EEEEEcCCCCCcccccEEEECCCCCe
Confidence 456666665 2 46888998877544322 111111122222 34 677777643 357888987765
Q ss_pred cc--eeeccCCcCeEEEEEcCCCCCeEEEecCC-----CcEEEEecCCCceeeEeec---CCCceeEEEEcCCCCeEeee
Q psy11351 71 EA--TELAVNSGPFHAVMFNPVEARLVATANSK-----DGIALYDTRKPKEVLMQYG---SCESCMSIRFNKAGTQLLGL 140 (224)
Q Consensus 71 ~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~ 140 (224)
-. ..+......-..+.+ ++.+++.|+.+ ..+.+||+.+.+- ..... .......+.+ +++.++.|
T Consensus 149 W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~G 222 (308)
T 1zgk_A 149 WHLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNEW-RMITAMNTIRSGAGVCVL--HNCIYAAG 222 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred EeECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeE-eeCCCCCCccccceEEEE--CCEEEEEe
Confidence 22 122211122223332 45677777654 4588999876532 11111 1111222233 56666666
Q ss_pred ecC-----CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCC-----CeEEEEeCCCCC
Q psy11351 141 RRR-----LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDD-----FVLYMWRVPRDD 202 (224)
Q Consensus 141 ~~d-----~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~v~iw~~~~~~ 202 (224)
+.+ ..+.+||+.+.+-...-........ .. ++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 223 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~--~~-~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 223 GYDGQDQLNSVERYDVETETWTFVAPMKHRRSA--LG-ITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEECCCCSSCCBS--CE-EEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCCccceEEEEeCCCCcEEECCCCCCCccc--eE-EEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 654 4588999887543222111111111 11 1122 67888888754 468899988764
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.60 E-value=0.01 Score=43.55 Aligned_cols=184 Identities=9% Similarity=0.028 Sum_probs=94.8
Q ss_pred ceEEEEEeCC--CcEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCC----CEEEEEecCCcccc--eeec
Q psy11351 7 IKVLRVIGND--DHVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDD----GRVLLFDTRSREEA--TELA 76 (224)
Q Consensus 7 ~~~l~~~~~d--g~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d----~~i~iwd~~~~~~~--~~~~ 76 (224)
+.+++.|+.+ ..+.+||..+++....- .....-.++... ++ .+++.|+.+ ..+.+||..+++-. ..+.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW-DN-VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE-TT-EEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE-CC-EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 4466677653 57899999887654332 111111122222 34 677777754 67888998876522 1222
Q ss_pred cCCcCeEEEEEcCCCCCeEEEecCC------CcEEEEecCCCceeeEeec--CCCceeEEEEcCCCCeEeeeec------
Q psy11351 77 VNSGPFHAVMFNPVEARLVATANSK------DGIALYDTRKPKEVLMQYG--SCESCMSIRFNKAGTQLLGLRR------ 142 (224)
Q Consensus 77 ~~~~~i~~~~~~~~~~~~l~~~~~d------g~v~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~------ 142 (224)
........+.+ ++.+++.|+.+ ..+.+||+.+.+- ..... ....-.+++. -+++.++.|+.
T Consensus 90 ~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 90 TPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRTESW-HTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVS 164 (306)
T ss_dssp SCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTT
T ss_pred ccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCCCce-EeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCc
Confidence 11122222232 45677777654 4588999887642 22211 1111112222 25566666653
Q ss_pred ---CCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCC-----CeEEEEeCCCCC
Q psy11351 143 ---RLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDD-----FVLYMWRVPRDD 202 (224)
Q Consensus 143 ---d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~v~iw~~~~~~ 202 (224)
-..+.+||+.+.+-...-......... .++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~---~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNH---GLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSC---EEEEE--TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcc---eEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 344788998876432221111111111 11222 67788887754 367889988764
No 309
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.60 E-value=0.0028 Score=50.02 Aligned_cols=155 Identities=11% Similarity=0.075 Sum_probs=88.9
Q ss_pred eeEEEEcCC-CCcEEEEecCCCEEEEEecCCcccceeecc---CCcCeEEEEE-------cCCCCCeEEEecCCC-----
Q psy11351 39 VYGLSVDPS-QDAIFASACDDGRVLLFDTRSREEATELAV---NSGPFHAVMF-------NPVEARLVATANSKD----- 102 (224)
Q Consensus 39 v~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~~~i~~~~~-------~~~~~~~l~~~~~dg----- 102 (224)
...|+|+|. +.+++++-...+.|++.|..++........ .......++| ++ ++..|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCCCccc
Confidence 568899983 435555555557888899887764433322 1235789999 99 666555554433
Q ss_pred --cEEEEecCC-Ccee-----eEeecCCCceeEEEEcCCCCeEee-eecCCCcEEEECC-------CCCc----------
Q psy11351 103 --GIALYDTRK-PKEV-----LMQYGSCESCMSIRFNKAGTQLLG-LRRRLPPVLYNTR-------SSSP---------- 156 (224)
Q Consensus 103 --~v~i~d~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v~v~d~~-------~~~~---------- 156 (224)
.|.+++... +... ..+. .......++++|++..|+. -..++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266666443 1111 1111 1223457788996555554 4466779999987 4543
Q ss_pred -ceec-ccCCcccceeeeEEEEeCCCCe-EEEEcCCCCeEEEEeCC
Q psy11351 157 -VAQF-DHEGYYNSCTMKSCCFAGTQDE-YVVSGSDDFVLYMWRVP 199 (224)
Q Consensus 157 -~~~~-~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~v~iw~~~ 199 (224)
...+ ..... . ....++|+| +++ ++++-+..+.|+.++..
T Consensus 299 ~~~~l~~~~~~--~-~p~~ia~~p-~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 299 TFKQLFTIADP--S-WEFQIFIHP-TGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TEEEEEECSSS--S-CCEEEEECT-TSSEEEEEETTTTEEEEEEEE
T ss_pred ccceeEecCCC--C-CceEEEEcC-CCCEEEEEeCCCCEEEEEecC
Confidence 1111 11110 0 012478888 576 46666678899886654
No 310
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.60 E-value=0.02 Score=46.68 Aligned_cols=190 Identities=8% Similarity=-0.060 Sum_probs=112.1
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEE
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAV 85 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~ 85 (224)
+.++.+-...+.|+.++++........ ..-.....+++.+.+.+++.+-+..+.|.+.++........+...-..-..+
T Consensus 361 ~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~i 440 (619)
T 3s94_A 361 GYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAI 440 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEE
T ss_pred CeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeE
Confidence 344444445667777777654433333 2224677899987554777887788999999987543222222233467899
Q ss_pred EEcCCCCCeEEEec-CCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec-CCCcEEEECCCCCcceec-cc
Q psy11351 86 MFNPVEARLVATAN-SKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR-RLPPVLYNTRSSSPVAQF-DH 162 (224)
Q Consensus 86 ~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~v~d~~~~~~~~~~-~~ 162 (224)
+++|..+.++.+-. ....|...++.-..........-.....+++++++..|+.+.. .+.|..+++......... ..
T Consensus 441 avdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~ 520 (619)
T 3s94_A 441 VLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 520 (619)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECC
T ss_pred EEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccC
Confidence 99994455555532 2356766666533222222233456789999998777777654 456888887644322221 11
Q ss_pred CCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 163 EGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
-.+...+++ . .+.++++-...+.|...+..++..
T Consensus 521 l~~P~glav-----~--~~~ly~tD~~~~~I~~~~k~~g~~ 554 (619)
T 3s94_A 521 IPHIFGFTL-----L--GDYVYWTDWQRRSIERVHKRSAER 554 (619)
T ss_dssp CCSSCCEEE-----E--TTEEEEECTTSSCEEEEESSSCCE
T ss_pred CCCcEEEEE-----E--CCEEEEeecCCCeEEEEEcCCCce
Confidence 122233332 2 356667766777888888887744
No 311
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.59 E-value=0.012 Score=43.77 Aligned_cols=188 Identities=8% Similarity=0.002 Sum_probs=113.1
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc-ccceeeccCC----cCeE
Q psy11351 9 VLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR-EEATELAVNS----GPFH 83 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~----~~i~ 83 (224)
.+|.- ...++.|+|+++.+.++.+.....|.-=.|-... .|+-.+ +..|+-|++... .+.+.+..|. ..|.
T Consensus 80 ViALr-ag~~LQiFnletK~klks~~~~e~VvfWkWis~~--~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QII 155 (365)
T 2xzh_A 80 VIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQII 155 (365)
T ss_dssp EEEEE-ETTEEEEEETTTTEEEEEEECSSCEEEEEECSSS--EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEE
T ss_pred EEEEe-cCCeEEEechHHhhhhcceecCCccEEEEecCCC--eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEE
Confidence 44444 3778999999999999888777888888887654 555554 358999999753 4555554443 3666
Q ss_pred EEEEcCCCCCeEEEec-------CCCcEEEEecCCCceeeEeecCCCceeEEEEcCC--C-CeEeeeec---CCCcEEEE
Q psy11351 84 AVMFNPVEARLVATAN-------SKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKA--G-TQLLGLRR---RLPPVLYN 150 (224)
Q Consensus 84 ~~~~~~~~~~~l~~~~-------~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~--~-~~l~~~~~---d~~v~v~d 150 (224)
.-..++ +.++++..+ -.|.+.+|..+.. ....+.+|...-..+.+.-+ . +.++.+.. .+++++.+
T Consensus 156 nY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiE 233 (365)
T 2xzh_A 156 NYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 233 (365)
T ss_dssp EEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEE
T ss_pred EEEECC-CCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEE
Confidence 777778 666655432 2367889998765 34555555443333322211 1 12332222 25788888
Q ss_pred CCCC---Ccce------ecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 151 TRSS---SPVA------QFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 151 ~~~~---~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+... .+.. .+-.....+...+ .+..++ ....+..-+.-|.+++||+.++.+.
T Consensus 234 i~~~~~~~~~f~kk~vdi~fppea~~DFPV-amqvs~-kygviyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 234 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISE-KHDVVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp CSSCCTTCCCCCCEEEEECCCTTCTTCCEE-EEEEET-TTTEEEEEETTSEEEEEETTTCCEE
T ss_pred cCCCCCCCCCcccccceeeCCccccCCceE-EEEecc-cCCEEEEEeCCcEEEEEEcccCcEE
Confidence 7432 1111 1111222233222 244455 4566666778999999999999885
No 312
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.56 E-value=0.0063 Score=44.86 Aligned_cols=185 Identities=8% Similarity=0.007 Sum_probs=94.5
Q ss_pred CcceEEEEEeCC----CcEEEEeCCCCceeeEEe--ccCCeeEEEEcCCCCcEEEEecC----C-----CEEEEEecCCc
Q psy11351 5 DPIKVLRVIGND----DHVISHDMASGDPIDFYL--HERPVYGLSVDPSQDAIFASACD----D-----GRVLLFDTRSR 69 (224)
Q Consensus 5 ~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~----d-----~~i~iwd~~~~ 69 (224)
-.+.+++.|+.+ ..+.+||..+++....-. ....-.+++.. ++ .+++.|+. + ..+.+||..+.
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-GG-LLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TT-EEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE-CC-EEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 345677777642 368899998776543321 11111122222 34 67777775 2 35788888776
Q ss_pred cc--ceeeccCCcCeEEEEEcCCCCCeEEEecCC-----CcEEEEecCCCceeeEeec---CCCceeEEEEcCCCCeEee
Q psy11351 70 EE--ATELAVNSGPFHAVMFNPVEARLVATANSK-----DGIALYDTRKPKEVLMQYG---SCESCMSIRFNKAGTQLLG 139 (224)
Q Consensus 70 ~~--~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~ 139 (224)
+- +..+.........+.+ ++.+++.|+.+ ..+.+||+.+.+- ..... ....-..+.+ ++..++.
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~ 174 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVI---DGHIYAVGGSHGCIHHNSVERYEPERDEW-HLVAPMLTRRIGVGVAVL--NRLLYAV 174 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEE---TTEEEEECCEETTEECCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred eEeECCCCCcCccccEEEEE---CCEEEEEcCCCCCcccccEEEECCCCCeE-eECCCCCccccceEEEEE--CCEEEEE
Confidence 52 1122211122223333 45677777643 3588899886532 11111 1111122222 5566666
Q ss_pred eecC-----CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCC-----CeEEEEeCCCCC
Q psy11351 140 LRRR-----LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDD-----FVLYMWRVPRDD 202 (224)
Q Consensus 140 ~~~d-----~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~v~iw~~~~~~ 202 (224)
|+.+ ..+.+||+.+.+-...-........ . .++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSG--A-GVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBS--C-EEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eCCCCCCcCceEEEEeCCCCeEeeCCCCCCcccc--c-eEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 6543 4588899876543222111111111 1 11222 67788888764 568899988764
No 313
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.53 E-value=0.018 Score=44.49 Aligned_cols=188 Identities=8% Similarity=0.009 Sum_probs=114.0
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc-ccceeeccCC----cCeE
Q psy11351 9 VLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR-EEATELAVNS----GPFH 83 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~----~~i~ 83 (224)
.+|.- ...++.|+|+++.+.++.......|.-=.|-.. +.|+-.+ +..|+-|++... .+.+.+..|. ..|.
T Consensus 79 iiALr-ag~~lQiFnle~K~klks~~~~e~VvfWkWis~--~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QII 154 (494)
T 1bpo_A 79 VIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL--NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQII 154 (494)
T ss_dssp CEEEE-ETTEEEEEETTTTEEEEEEECSSCCCEEEEEET--TEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEE
T ss_pred EEEEe-cCCeEEEEchHHhhhhcceecCCCceEEEecCC--CeEEEEc-CCeeEEecccCCCCchhheecchhcccceEE
Confidence 34433 377999999999998888876677777777755 3555555 459999999743 4555554443 3677
Q ss_pred EEEEcCCCCCeEEEec-------CCCcEEEEecCCCceeeEeecCCCceeEEEEcCCC---CeEeeeec---CCCcEEEE
Q psy11351 84 AVMFNPVEARLVATAN-------SKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAG---TQLLGLRR---RLPPVLYN 150 (224)
Q Consensus 84 ~~~~~~~~~~~l~~~~-------~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~---d~~v~v~d 150 (224)
.-..++ +.++++..+ -.|.+.+|..+.. ....+.+|...-..+.+.-+. ..++.+.. .+.+++.+
T Consensus 155 nY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~E 232 (494)
T 1bpo_A 155 NYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIE 232 (494)
T ss_dssp EEEECT-TSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEE
T ss_pred EEEECC-CCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEE
Confidence 777788 666665432 2467889998765 345555565444333332211 12332322 26788888
Q ss_pred CCCC---Cc-c-----eecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 151 TRSS---SP-V-----AQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 151 ~~~~---~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
+... .+ . ..+-.....+...+ .+..++ ....+..-+.-|.+++||+.++.+.
T Consensus 233 i~~~~~~~~~f~kk~vdv~fppe~~~DFPv-amqvs~-kygviyviTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 233 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISE-KHDVVFLITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp CSCCCTTCCCCCCEEEECCCCTTSTTCCEE-EEEEET-TTTEEEEEETTSEEEEEETTTCCEE
T ss_pred cCCCccCCCCccceeeeeeCCcccccCcee-EEEecc-cCCEEEEEecCceEEEEecccceee
Confidence 8532 11 1 01111222333222 245555 4566667778999999999999885
No 314
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.51 E-value=0.011 Score=41.38 Aligned_cols=130 Identities=12% Similarity=0.103 Sum_probs=79.4
Q ss_pred eEEEEEeCCCcEEEEeCCCCc------eeeEEec--cCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCC
Q psy11351 8 KVLRVIGNDDHVISHDMASGD------PIDFYLH--ERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNS 79 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~------~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 79 (224)
.+|....+| +++.=...++. .....+. =..+.+++|+|++ .+.+. .+|.+.-.+..+.+...-+ +..
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~-~s~ 79 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWM-GRA 79 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHH-HHC
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCc-cEEEE--eCCeEEEECCCCCCccccc-ccc
Confidence 467777777 77776666655 2234444 2478899999988 56655 6777766665443221111 111
Q ss_pred cC--------eEEEEEcCCCCCeEEEecCCCcEEEEecCCCceee-----Eeec--CCCceeEEEEcCCCCeEeeeecCC
Q psy11351 80 GP--------FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVL-----MQYG--SCESCMSIRFNKAGTQLLGLRRRL 144 (224)
Q Consensus 80 ~~--------i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~-----~~~~--~~~~v~~~~~~~~~~~l~~~~~d~ 144 (224)
.. ..++.|.| ++.+.++ .||.|.-++-.+...-. ...+ -=..+..|.|.|+|.+.++. |+
T Consensus 80 t~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg 154 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQ 154 (236)
T ss_dssp EEEECSCGGGCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred cEecccccccceEEEECC-CCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CC
Confidence 22 37889999 8887777 45888777754322111 1111 11357899999999887776 66
Q ss_pred CcE
Q psy11351 145 PPV 147 (224)
Q Consensus 145 ~v~ 147 (224)
.++
T Consensus 155 ~ly 157 (236)
T 1tl2_A 155 QFY 157 (236)
T ss_dssp EEE
T ss_pred cEE
Confidence 544
No 315
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.46 E-value=0.015 Score=43.00 Aligned_cols=185 Identities=12% Similarity=0.119 Sum_probs=90.7
Q ss_pred cceEEEEEeC----CC-------cEEEEeCCCCceeeEEe--ccCCeeEEEEcCCCCcEEEEecCC-------CEEEEEe
Q psy11351 6 PIKVLRVIGN----DD-------HVISHDMASGDPIDFYL--HERPVYGLSVDPSQDAIFASACDD-------GRVLLFD 65 (224)
Q Consensus 6 ~~~~l~~~~~----dg-------~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~d-------~~i~iwd 65 (224)
.+.+++.|+. ++ .+..||..+.+....-. ....-.+++.. ++ .+++.|+.+ ..+.+||
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd 133 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-DD-KIYVVAGKDLQTEASLDSVLCYD 133 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE-TT-EEEEEEEEBTTTCCEEEEEEEEE
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE-CC-EEEEEcCccCCCCcccceEEEEe
Confidence 4566777773 12 17788887765443221 11111122222 34 677777654 3578888
Q ss_pred cCCcccce--eeccCCcCeEEEEEcCCCCCeEEEecC------CCcEEEEecCCCceeeEeec--CCCceeEEEEcCCCC
Q psy11351 66 TRSREEAT--ELAVNSGPFHAVMFNPVEARLVATANS------KDGIALYDTRKPKEVLMQYG--SCESCMSIRFNKAGT 135 (224)
Q Consensus 66 ~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~v~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~ 135 (224)
..+.+-.. .+......-..+. . ++.+++.|+. -..+.+||+.+.+- ..... ....-.+++.. +++
T Consensus 134 ~~~~~W~~~~~~p~~r~~~~~~~--~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~-~~~ 208 (318)
T 2woz_A 134 PVAAKWSEVKNLPIKVYGHNVIS--H-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDW-KDLAPMKTPRSMFGVAIH-KGK 208 (318)
T ss_dssp TTTTEEEEECCCSSCEESCEEEE--E-TTEEEEECCEESSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE-TTE
T ss_pred CCCCCEeECCCCCCcccccEEEE--E-CCEEEEEcCCCCCCCccceEEEEcCCCCEE-EECCCCCCCcccceEEEE-CCE
Confidence 87765221 1211111112222 2 5667777764 23589999987642 22211 11111122222 556
Q ss_pred eEeeeecC-----CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCC--------------CeEEEE
Q psy11351 136 QLLGLRRR-----LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDD--------------FVLYMW 196 (224)
Q Consensus 136 ~l~~~~~d-----~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d--------------~~v~iw 196 (224)
.++.|+.+ ..+.+||+.+.+-...-......... .++.. ++.+++.|+.+ ..+.+|
T Consensus 209 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~---~~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~y 283 (318)
T 2woz_A 209 IVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSI---SLVSL--AGSLYAIGGFAMIQLESKEFAPTEVNDIWKY 283 (318)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSC---EEEEE--TTEEEEECCBCCBC----CCBCCBCCCEEEE
T ss_pred EEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccce---EEEEE--CCEEEEECCeeccCCCCceeccceeeeEEEE
Confidence 66666543 24778898765432221111111111 11111 67788887754 357889
Q ss_pred eCCCCC
Q psy11351 197 RVPRDD 202 (224)
Q Consensus 197 ~~~~~~ 202 (224)
|+.+.+
T Consensus 284 d~~~~~ 289 (318)
T 2woz_A 284 EDDKKE 289 (318)
T ss_dssp ETTTTE
T ss_pred eCCCCE
Confidence 988764
No 316
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.41 E-value=0.019 Score=50.35 Aligned_cols=175 Identities=13% Similarity=0.186 Sum_probs=102.1
Q ss_pred CcEEEEeCCCCceeeEE--eccCCeeEEE---EcCCCCcEEEEec----------CCCEEEEEecCCcccceee-ccCCc
Q psy11351 17 DHVISHDMASGDPIDFY--LHERPVYGLS---VDPSQDAIFASAC----------DDGRVLLFDTRSREEATEL-AVNSG 80 (224)
Q Consensus 17 g~i~iwd~~~~~~~~~~--~~~~~v~~~~---~~~~~~~~l~s~~----------~d~~i~iwd~~~~~~~~~~-~~~~~ 80 (224)
+.|++.|..+.+.+..+ .....+.+++ |..+...+++.|. ..|.|.+|++..++..... ...++
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 46899999888877655 3444555555 3333336788775 4589999999744321111 23467
Q ss_pred CeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCC-CCccee
Q psy11351 81 PFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS-SSPVAQ 159 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~-~~~~~~ 159 (224)
++++++--. +++++. .+.++++|++...+.+.....+-..+..+.....++++++|..-..+.++..+. ...+..
T Consensus 887 ~v~al~~~~--g~Lla~--ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~ 962 (1158)
T 3ei3_A 887 AVYSMVEFN--GKLLAS--INSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEE 962 (1158)
T ss_dssp CEEEEEEET--TEEEEE--ETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEE
T ss_pred cCEEEeeeC--CEEEEE--cCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEE
Confidence 888887544 444444 347899999986653331111112233334434578899998777777765432 222222
Q ss_pred c-ccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCC
Q psy11351 160 F-DHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 160 ~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~ 200 (224)
+ +...+.. ...+.+- +...++.+..+|.+.+...+.
T Consensus 963 ~a~D~~~~~---vta~~~l--d~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 963 IARDFNPNW---MSAVEIL--DDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEECCSCBC---EEEEEEE--ETTEEEEEETTSEEEEEEECT
T ss_pred EEeeccccc---EEEEEEE--ccCcEEEEcCCCcEEEEecCC
Confidence 3 2222211 2223333 345777789999999987765
No 317
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.28 E-value=0.033 Score=41.97 Aligned_cols=94 Identities=14% Similarity=0.146 Sum_probs=54.4
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCCceeeEE------eccCCeeEEEEcCC---CCcEEEEecCC-----CEEEEEec
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASGDPIDFY------LHERPVYGLSVDPS---QDAIFASACDD-----GRVLLFDT 66 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~------~~~~~v~~~~~~~~---~~~~l~s~~~d-----~~i~iwd~ 66 (224)
|++..+|+++++ ..+|.|++++ +++..... ........++|+|+ +..++++-... ..|..++.
T Consensus 36 ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~ 112 (352)
T 2ism_A 36 LAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRH 112 (352)
T ss_dssp EEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEE
T ss_pred EEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEe
Confidence 455667775554 5679999998 44322111 12457899999998 42454444332 67877877
Q ss_pred CCcc-----cc-eeec---cCCcCeEEEEEcCCCCCeEEEe
Q psy11351 67 RSRE-----EA-TELA---VNSGPFHAVMFNPVEARLVATA 98 (224)
Q Consensus 67 ~~~~-----~~-~~~~---~~~~~i~~~~~~~~~~~~l~~~ 98 (224)
..+. .+ ..+. ........++|.| ++.++++.
T Consensus 113 ~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~ 152 (352)
T 2ism_A 113 LGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTT 152 (352)
T ss_dssp CSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEEC
T ss_pred CCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEE
Confidence 6431 11 1122 1112236899999 77766664
No 318
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.26 E-value=0.041 Score=42.44 Aligned_cols=141 Identities=9% Similarity=0.101 Sum_probs=87.3
Q ss_pred cEEEEecCCCEEEEEecCCcccceeeccC----CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCce-----------
Q psy11351 50 AIFASACDDGRVLLFDTRSREEATELAVN----SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKE----------- 114 (224)
Q Consensus 50 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~----------- 114 (224)
..++.+- ++.||.-++......+.++.. -..|..+..+| ++.+||..+ +..|.|-.+..+..
T Consensus 33 t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 33 TRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTT
T ss_pred CEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCccccccccc
Confidence 3444443 368887787754444444332 22578899999 889998884 45888888873210
Q ss_pred -eeEee-c-----CCCceeEEEEcCC---CCeEeeeecCCCcEEEECCCCC--cceecc-------cCCcccceeeeEEE
Q psy11351 115 -VLMQY-G-----SCESCMSIRFNKA---GTQLLGLRRRLPPVLYNTRSSS--PVAQFD-------HEGYYNSCTMKSCC 175 (224)
Q Consensus 115 -~~~~~-~-----~~~~v~~~~~~~~---~~~l~~~~~d~~v~v~d~~~~~--~~~~~~-------~~~~~~~~~~~~~~ 175 (224)
...+. + ...+|..+.|+|- +..|++-..|+.|++||+.... +. .+. ....+ ..+.++|
T Consensus 110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~--~ev~S~~ 186 (452)
T 3pbp_A 110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARV--NDITDLE 186 (452)
T ss_dssp EEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSC--CCEEEEE
T ss_pred ceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCccc--ceEEEEE
Confidence 11111 1 3578999999996 4589999999999999997632 22 221 11222 3345678
Q ss_pred EeCCCCeEEEE--cCCCCeEEEEe
Q psy11351 176 FAGTQDEYVVS--GSDDFVLYMWR 197 (224)
Q Consensus 176 ~~~~~~~~l~s--~~~d~~v~iw~ 197 (224)
|.+ ++-.|.. .+.+|.|+-..
T Consensus 187 Fg~-~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 187 FSK-DGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp ECT-TSSCEEEEECTTSCEEEEES
T ss_pred EcC-CCcEEEEEecCCCCCEEEEC
Confidence 876 4544444 45677776543
No 319
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.23 E-value=0.038 Score=41.50 Aligned_cols=137 Identities=9% Similarity=-0.044 Sum_probs=62.6
Q ss_pred CEEEEEecCCcccc--eeeccCCcCeEEEEEcCCCCCeEEEecC------CCcEEEEec--CCCceeeEeec---CCCce
Q psy11351 59 GRVLLFDTRSREEA--TELAVNSGPFHAVMFNPVEARLVATANS------KDGIALYDT--RKPKEVLMQYG---SCESC 125 (224)
Q Consensus 59 ~~i~iwd~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~v~i~d~--~~~~~~~~~~~---~~~~v 125 (224)
..+.+||..+.+-. ..+......-.+++.. ++.+++.|+. ...+..||+ .+.+ -..... .....
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~-W~~~~~~~~~~~~~ 244 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLK-WNKLAPVSSPDGVA 244 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CE-EEECCCSSTTTCCB
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCc-EEecCCCCCCcccc
Confidence 57889998876522 2221111110233332 4567777653 235777876 3332 111111 11111
Q ss_pred eEEEEcCCCCeEeeeecC----------------------CCcEEEECCCCCcceecccC-CcccceeeeEEEEeCCCCe
Q psy11351 126 MSIRFNKAGTQLLGLRRR----------------------LPPVLYNTRSSSPVAQFDHE-GYYNSCTMKSCCFAGTQDE 182 (224)
Q Consensus 126 ~~~~~~~~~~~l~~~~~d----------------------~~v~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 182 (224)
...+...+++.++.|+.+ ..+.+||+.+.+-...-... ....... +.+ ++.
T Consensus 245 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~---~~~---~~~ 318 (357)
T 2uvk_A 245 GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS---LPW---NNS 318 (357)
T ss_dssp SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE---EEE---TTE
T ss_pred cceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee---EEe---CCE
Confidence 111222355666666532 25789998865433221111 1111111 111 678
Q ss_pred EEEEcCCCC------eEEEEeCCCCCeE
Q psy11351 183 YVVSGSDDF------VLYMWRVPRDDIY 204 (224)
Q Consensus 183 ~l~s~~~d~------~v~iw~~~~~~~~ 204 (224)
+++.|+.++ .|.++++++++..
T Consensus 319 i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 319 LLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp EEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred EEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 888887542 4666788888765
No 320
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.19 E-value=0.038 Score=40.73 Aligned_cols=181 Identities=9% Similarity=-0.031 Sum_probs=90.5
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeEE-ec-cCCeeEEEEcCCCCcEEEEecC-----C------CEEEEEecCCcccc--e
Q psy11351 9 VLRVIGNDDHVISHDMASGDPIDFY-LH-ERPVYGLSVDPSQDAIFASACD-----D------GRVLLFDTRSREEA--T 73 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~~~~~~-~~-~~~v~~~~~~~~~~~~l~s~~~-----d------~~i~iwd~~~~~~~--~ 73 (224)
+++.|+ ..+.+||..+++....- .. ...........++ .+++.|+. . ..+..||..+++-. .
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECC-EEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 455565 57999999988754321 11 1122222223344 67777763 1 23778888776521 1
Q ss_pred eeccCCcCeEEEEEcCCCCCeEEEecCC--------CcEEEEecCCCceeeEeec--CCCceeEEEEcCCCCeEeeeec-
Q psy11351 74 ELAVNSGPFHAVMFNPVEARLVATANSK--------DGIALYDTRKPKEVLMQYG--SCESCMSIRFNKAGTQLLGLRR- 142 (224)
Q Consensus 74 ~~~~~~~~i~~~~~~~~~~~~l~~~~~d--------g~v~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~- 142 (224)
.+.........+.+ ++.+++.|+.+ ..+.+||+.+.+- ..... ....-.+++. -+++.++.|+.
T Consensus 84 ~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 158 (315)
T 4asc_A 84 PLPSPRCLFGLGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKW-GESDPLPYVVYGHTVLS-HMDLVYVIGGKG 158 (315)
T ss_dssp CBSSCEESCEEEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEE-ETTEEEEECCBC
T ss_pred CCCcchhceeEEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcE-eECCCCCCcccceeEEE-ECCEEEEEeCCC
Confidence 12111111122222 45677777632 3488999887632 12111 1111112222 34566666665
Q ss_pred C-----CCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCC-----eEEEEeCCCCC
Q psy11351 143 R-----LPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDF-----VLYMWRVPRDD 202 (224)
Q Consensus 143 d-----~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-----~v~iw~~~~~~ 202 (224)
+ ..+.+||+.+.+-...-........ .. ++.. ++.+++.|+.++ .+.+||+.+.+
T Consensus 159 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~-~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEWKELAPMQTARSL--FG-ATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTSCBCCCEEEEETTTTEEEECCCCSSCCBS--CE-EEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCeEEECCCCCCchhc--eE-EEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 2 3588899876533222111111111 11 1111 677877777543 58889988763
No 321
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.15 E-value=0.045 Score=40.76 Aligned_cols=111 Identities=14% Similarity=0.144 Sum_probs=65.0
Q ss_pred eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec----cCCcCeEEEEEcCCCCCeEEEecCCCcEEEEec
Q psy11351 34 LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA----VNSGPFHAVMFNPVEARLVATANSKDGIALYDT 109 (224)
Q Consensus 34 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~ 109 (224)
.....+..+.+.+++ .+++. +.+|.+++.+...++....+. .....+.++.+.+ ++.+++.+. +|.+ .+..
T Consensus 202 ~~~~~~~~~~~~~~g-~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g~i-~~S~ 276 (327)
T 2xbg_A 202 TTSRRLHNMGFTPDG-RLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT-PNEVWLAGG-AGAL-LCSQ 276 (327)
T ss_dssp CSSSCEEEEEECTTS-CEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-SSCEEEEES-TTCE-EEES
T ss_pred CCCCccceeEECCCC-CEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-CCEEEEEeC-CCeE-EEeC
Confidence 345678899999987 55544 457888776433233222222 1223588999988 677777664 5655 3333
Q ss_pred CCCceeeEee---cCCCceeEEEEcCCCCeEeeeecCCCcEEEE
Q psy11351 110 RKPKEVLMQY---GSCESCMSIRFNKAGTQLLGLRRRLPPVLYN 150 (224)
Q Consensus 110 ~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d 150 (224)
..++.-.... .....+.++.|.+++. +++++.+|.|.-++
T Consensus 277 DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 277 DGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp STTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred CCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 3343333222 1235678888875555 55556677665554
No 322
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.10 E-value=0.046 Score=41.19 Aligned_cols=101 Identities=17% Similarity=0.163 Sum_probs=59.8
Q ss_pred cCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccc--ceee---ccCCcCeEEEEEcCC---CCCeEEEecCC-----C
Q psy11351 36 ERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREE--ATEL---AVNSGPFHAVMFNPV---EARLVATANSK-----D 102 (224)
Q Consensus 36 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~---~~~~~~i~~~~~~~~---~~~~l~~~~~d-----g 102 (224)
-.....++|.|++ .++++ ..++.|.+++ .++. +..+ .........++++|+ ++.++++-... .
T Consensus 30 l~~P~~ia~~pdG-~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 30 LEVPWALAFLPDG-GMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CSCEEEEEECTTS-CEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCceEEEEcCCC-eEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 3457899999998 55555 4569999998 3331 1111 122346789999993 24444444332 5
Q ss_pred cEEEEecCCCc-----eeeE-ee---cCCCceeEEEEcCCCCeEeee
Q psy11351 103 GIALYDTRKPK-----EVLM-QY---GSCESCMSIRFNKAGTQLLGL 140 (224)
Q Consensus 103 ~v~i~d~~~~~-----~~~~-~~---~~~~~v~~~~~~~~~~~l~~~ 140 (224)
.|..|+..... .+.. +. ........++|.|+|.+.++.
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 68888876431 1111 21 111234689999999755553
No 323
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.06 E-value=0.059 Score=40.69 Aligned_cols=157 Identities=12% Similarity=0.099 Sum_probs=85.6
Q ss_pred cCCeeEEEEcCCCCcEEEEec------------CCCEEEEEecCCcc-cceee--cc-----CCcCeEEEEEcCC-CC--
Q psy11351 36 ERPVYGLSVDPSQDAIFASAC------------DDGRVLLFDTRSRE-EATEL--AV-----NSGPFHAVMFNPV-EA-- 92 (224)
Q Consensus 36 ~~~v~~~~~~~~~~~~l~s~~------------~d~~i~iwd~~~~~-~~~~~--~~-----~~~~i~~~~~~~~-~~-- 92 (224)
.....++...|+| ..+++++ .+|.|.++|..+.. ....+ .+ ....-..+.+.++ ++
T Consensus 49 ~~G~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~ 127 (355)
T 3sre_A 49 DNGSEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTV 127 (355)
T ss_dssp CSCCCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCE
T ss_pred CCCcceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcE
Confidence 3456788888887 5555542 78999999987431 11122 22 1235566666441 22
Q ss_pred CeEEEecC--CCcEEEEecCCCceeeEe----ec-CCCceeEEEEcCCCCeEeeeec---C------------CCcEEEE
Q psy11351 93 RLVATANS--KDGIALYDTRKPKEVLMQ----YG-SCESCMSIRFNKAGTQLLGLRR---R------------LPPVLYN 150 (224)
Q Consensus 93 ~~l~~~~~--dg~v~i~d~~~~~~~~~~----~~-~~~~v~~~~~~~~~~~l~~~~~---d------------~~v~v~d 150 (224)
+++++-.. +..+.+|++......... .+ .-.....+.+.++|.+.++... | ..-.+|.
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 34454333 567888877654222221 11 2345788999999987766431 1 1223333
Q ss_pred CCCCCcceec-ccCCcccceeeeEEEEeCCCCe-EEEEcCCCCeEEEEeCCC
Q psy11351 151 TRSSSPVAQF-DHEGYYNSCTMKSCCFAGTQDE-YVVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 151 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~v~iw~~~~ 200 (224)
...++ +... ..-...+ -++|+| +++ ++++-+..+.|..|++..
T Consensus 208 ~d~~~-~~~~~~~l~~pN-----Gia~sp-Dg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 208 YSPND-VRVVAEGFDFAN-----GINISP-DGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp ECTTC-CEEEEEEESSEE-----EEEECT-TSSEEEEEEGGGTEEEEEEECT
T ss_pred EECCe-EEEeecCCcccC-----cceECC-CCCEEEEEeCCCCeEEEEEECC
Confidence 33332 2222 1111222 377888 565 455666788999999874
No 324
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.98 E-value=0.062 Score=39.63 Aligned_cols=181 Identities=11% Similarity=0.046 Sum_probs=89.1
Q ss_pred eEEEEEeCCCcEEEEeCCCCceeeEE-e--ccCCeeEEEEcCCCCcEEEEecC----CC-------EEEEEecCCcccc-
Q psy11351 8 KVLRVIGNDDHVISHDMASGDPIDFY-L--HERPVYGLSVDPSQDAIFASACD----DG-------RVLLFDTRSREEA- 72 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~~~~~~~~-~--~~~~v~~~~~~~~~~~~l~s~~~----d~-------~i~iwd~~~~~~~- 72 (224)
.+++.|+. .+..||..+++....- . ....-.++ ...++ .+++.|+. ++ .+..||..+.+-.
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~-~~~~~-~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 92 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSI-VTQQN-QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG 92 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEE-ECSSS-CEEEEESSCC-------CCCBEEEEEETTTTEEEE
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEE-EEECC-EEEEECCcccCccccCCCccccEEEEeCCCCcEEE
Confidence 45555553 4899999988755422 1 11122223 23444 67777773 12 2777888766522
Q ss_pred -eeeccCCcCeEEEEEcCCCCCeEEEecCC-------CcEEEEecCCCceeeEeecCCCc--eeEEEEcCCCCeEeeeec
Q psy11351 73 -TELAVNSGPFHAVMFNPVEARLVATANSK-------DGIALYDTRKPKEVLMQYGSCES--CMSIRFNKAGTQLLGLRR 142 (224)
Q Consensus 73 -~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-------g~v~i~d~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~ 142 (224)
..+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-. .......+ -.+++. .+++.++.|+.
T Consensus 93 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~~iyv~GG~ 167 (318)
T 2woz_A 93 LPPLPSARCLFGLGEV---DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPIKVYGHNVIS-HNGMIYCLGGK 167 (318)
T ss_dssp CSCBSSCBCSCEEEEE---TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSSCEESCEEEE-ETTEEEEECCE
T ss_pred CCCCCccccccceEEE---CCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCCcccccEEEE-ECCEEEEEcCC
Confidence 112111112222222 45677777653 24788898865322 22111111 112222 35666666653
Q ss_pred ------CCCcEEEECCCCCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCC-----CeEEEEeCCCCC
Q psy11351 143 ------RLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDD-----FVLYMWRVPRDD 202 (224)
Q Consensus 143 ------d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~v~iw~~~~~~ 202 (224)
-..+.+||+.+.+-...-........ . .++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 168 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSM--F-GVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp ESSSCBCCCEEEEETTTTEEEEECCCSSCCBS--C-EEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCCCCccceEEEEcCCCCEEEECCCCCCCccc--c-eEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 23588999887643222111111111 1 11121 57777777643 357788988764
No 325
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.93 E-value=0.13 Score=42.54 Aligned_cols=193 Identities=8% Similarity=0.097 Sum_probs=100.4
Q ss_pred cceEEEEEeCC----CcEEEEeCCCCceeeEE-e-------ccCCeeEEEEcC-CCCcEEEEecCC------CEEEEEec
Q psy11351 6 PIKVLRVIGND----DHVISHDMASGDPIDFY-L-------HERPVYGLSVDP-SQDAIFASACDD------GRVLLFDT 66 (224)
Q Consensus 6 ~~~~l~~~~~d----g~i~iwd~~~~~~~~~~-~-------~~~~v~~~~~~~-~~~~~l~s~~~d------~~i~iwd~ 66 (224)
.+.+++.|+.+ ..+.+||..+++....- . ....-.+++..+ ++ .+++.|+.+ ..+.+||.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEECCBSSTTCBCCCCEEEET
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCC-EEEEEcCCCCCCCccccEEEEeC
Confidence 34567777653 35888888877654332 1 111122333333 55 677777654 35778888
Q ss_pred CCccc--ceeeccCCcCeEEEEEcCCCCCeEEEecCCC--cEEEEecCCCceeeEe-----ecCCCceeEEEEcCC-CCe
Q psy11351 67 RSREE--ATELAVNSGPFHAVMFNPVEARLVATANSKD--GIALYDTRKPKEVLMQ-----YGSCESCMSIRFNKA-GTQ 136 (224)
Q Consensus 67 ~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg--~v~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~~-~~~ 136 (224)
.+.+- +..+...... .+++... ++.+++.|+.++ .+.+||+.+..-.... ........++.+..+ ++.
T Consensus 476 ~t~~W~~~~~~p~~R~~-h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFR-HSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEEECCCCSBCCBS-CEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCccc-ceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 77542 2222211122 2333323 567888887654 6899999876422111 111222334566655 566
Q ss_pred Eeeeec--C-----CCcEEEECCCCCc-----ceecccCCcccceeeeEEEEeCCCCeEEEEcCC--------CCeEEEE
Q psy11351 137 LLGLRR--R-----LPPVLYNTRSSSP-----VAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSD--------DFVLYMW 196 (224)
Q Consensus 137 l~~~~~--d-----~~v~v~d~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~--------d~~v~iw 196 (224)
++.|+. + ..+.+||+.+... -..+........... .++... ++.+++.|+. ...+.+|
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYIT-PRKLLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEE-TTEEEEECCBCSSCCCCTTTSEEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeC-CCEEEEECCccCCCCCCCCCeEEEE
Confidence 666665 2 3478899887762 111111000111111 112221 3788888874 3468999
Q ss_pred eCCCCCe
Q psy11351 197 RVPRDDI 203 (224)
Q Consensus 197 ~~~~~~~ 203 (224)
|+.+.+-
T Consensus 632 d~~t~~W 638 (695)
T 2zwa_A 632 DPLSETL 638 (695)
T ss_dssp ETTTTEE
T ss_pred ECCCCeE
Confidence 9987643
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.88 E-value=0.061 Score=47.84 Aligned_cols=194 Identities=7% Similarity=-0.012 Sum_probs=110.8
Q ss_pred CCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCC-cccceeeccC---
Q psy11351 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRS-REEATELAVN--- 78 (224)
Q Consensus 3 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~--- 78 (224)
.-+|.+.+++--...++.|+|+++.+.++.......|.-=.|-... .|+-.+ +..|.-|++.. ..+++.+..|
T Consensus 72 IMnP~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~--~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L 148 (1630)
T 1xi4_A 72 IMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSL 148 (1630)
T ss_pred ccCCCcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEecCCC--eeEEEc-CCeEEEeccCCCCccHHHHhcchhc
Confidence 3345554554445789999999998888877666677777777553 555544 35899999964 3455555444
Q ss_pred -CcCeEEEEEcCCCCCeEEEec-------CCCcEEEEecCCCceeeEeecCCCceeEEEEc--CCC-CeEeeee---cCC
Q psy11351 79 -SGPFHAVMFNPVEARLVATAN-------SKDGIALYDTRKPKEVLMQYGSCESCMSIRFN--KAG-TQLLGLR---RRL 144 (224)
Q Consensus 79 -~~~i~~~~~~~~~~~~l~~~~-------~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~l~~~~---~d~ 144 (224)
...|..-..++ +.++++..+ -.|.+.+|..... ....+.+|.+.-..+... +.. ..++.+. ..+
T Consensus 149 ~~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~ 226 (1630)
T 1xi4_A 149 AGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (1630)
T ss_pred ccCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCc
Confidence 34566667777 666655332 4577889988754 233344444333222221 111 1222221 125
Q ss_pred CcEEEECCCC---Ccce------ecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCe
Q psy11351 145 PPVLYNTRSS---SPVA------QFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDI 203 (224)
Q Consensus 145 ~v~v~d~~~~---~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~ 203 (224)
.++|.++... .+.. .+-.+...+...+ .+..++ ....+..-+.-|.+.+||+.++..
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv-~~~vs~-k~g~iy~itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISE-KHDVVFLITKYGYIHLYDLETGTC 292 (1630)
T ss_pred eEEEEecCCCccCCCCCccccccccCCcccccCcce-EEEecc-ccCEEEEEecCceEEEEecccchh
Confidence 7888887432 1111 1111112222211 133444 455666677899999999999976
No 327
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.69 E-value=0.13 Score=38.85 Aligned_cols=102 Identities=11% Similarity=0.141 Sum_probs=57.2
Q ss_pred cCCeeEEEEcCCCCc-EEEEecCCCEEEEEecCCccc---ceee----ccCCcCeEEEEEcCC---CCCeEEEecC----
Q psy11351 36 ERPVYGLSVDPSQDA-IFASACDDGRVLLFDTRSREE---ATEL----AVNSGPFHAVMFNPV---EARLVATANS---- 100 (224)
Q Consensus 36 ~~~v~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~---~~~~----~~~~~~i~~~~~~~~---~~~~l~~~~~---- 100 (224)
-.....++|.|++ . +++ +...|.|++++.. ++. +..+ .........++++|+ ++.++++-+.
T Consensus 17 l~~P~~i~~~pdG-~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 17 LDHPWALAFLPDN-HGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp ESSEEEEEECSTT-CCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CCCcEEEEEcCCC-CEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 3457899999998 6 554 4567999999853 321 1111 122346789999993 3444444322
Q ss_pred ---CCcEEEEecCCCc----eeeEe-ec------CCCceeEEEEcCCCCeEeee
Q psy11351 101 ---KDGIALYDTRKPK----EVLMQ-YG------SCESCMSIRFNKAGTQLLGL 140 (224)
Q Consensus 101 ---dg~v~i~d~~~~~----~~~~~-~~------~~~~v~~~~~~~~~~~l~~~ 140 (224)
...|..|++.... ....+ .. .......++|.|+|.+.++.
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence 2356666664321 11111 11 11224579999999655553
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.66 E-value=0.045 Score=38.28 Aligned_cols=138 Identities=13% Similarity=0.108 Sum_probs=74.6
Q ss_pred CCCCcceEEEEEeCCCcEEEEeCCCCceeeEEeccCC--------eeEEEEcCCCCcEEEEecCCCEEEEEecCCcccce
Q psy11351 2 ASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERP--------VYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73 (224)
Q Consensus 2 a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 73 (224)
|+..+|.+.+. .+|.+.-.+..+.+...-++-... ..++.|.|++ .+.++ .||.|.-++..+.....
T Consensus 47 af~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G-~LYav--~dG~iyr~~pP~~~~~~ 121 (236)
T 1tl2_A 47 FLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNG-YLYAV--SKDKLYKASPPQSDTDN 121 (236)
T ss_dssp EECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCC
T ss_pred EECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCC-CEEEe--CCCEEEEeCCCcCCCCc
Confidence 45566665555 677766666654322211111112 4789999998 66666 56999877753322111
Q ss_pred ------ee-ccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCc------eeeEee-cCCCceeEEEEcCCCCeEee
Q psy11351 74 ------EL-AVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPK------EVLMQY-GSCESCMSIRFNKAGTQLLG 139 (224)
Q Consensus 74 ------~~-~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~------~~~~~~-~~~~~v~~~~~~~~~~~l~~ 139 (224)
.+ ..-=..+..+.|.| ++.+.+.. |+.++-....+.. ....+. ..-..-+-+.|.+++...++
T Consensus 122 Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v 198 (236)
T 1tl2_A 122 WIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGV 198 (236)
T ss_dssp HHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEE
T ss_pred eeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEE
Confidence 11 11113689999999 88888777 6665332222111 001111 11123344668888877766
Q ss_pred eecCCCcEEEEC
Q psy11351 140 LRRRLPPVLYNT 151 (224)
Q Consensus 140 ~~~d~~v~v~d~ 151 (224)
. ++ ++|..
T Consensus 199 ~--~g--~~Y~~ 206 (236)
T 1tl2_A 199 Q--GG--KFYED 206 (236)
T ss_dssp E--TT--EEEEE
T ss_pred e--CC--eEEec
Confidence 5 55 44543
No 329
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.64 E-value=0.32 Score=42.83 Aligned_cols=206 Identities=10% Similarity=0.016 Sum_probs=103.8
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeE--EeccCCeeEEEEcCCC-----CcEEEEecC-CCEEEEEecCCcccceeecc-CC
Q psy11351 9 VLRVIGNDDHVISHDMASGDPIDF--YLHERPVYGLSVDPSQ-----DAIFASACD-DGRVLLFDTRSREEATELAV-NS 79 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~-----~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~-~~ 79 (224)
+++.++ ++.+.++++..++.... ......|.|+++.|.. ..+++.|.. |++++|+++.+.+.+....- ..
T Consensus 525 ~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~ 603 (1158)
T 3ei3_A 525 QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGE 603 (1158)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSS
T ss_pred EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCC
Confidence 444444 67788888776543322 2456789999998643 268888886 99999999986554432211 11
Q ss_pred cCeEEEEEcC-CCCCeEEEecCCCcEEEEecC--CCceee---EeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCC
Q psy11351 80 GPFHAVMFNP-VEARLVATANSKDGIALYDTR--KPKEVL---MQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 80 ~~i~~~~~~~-~~~~~l~~~~~dg~v~i~d~~--~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~ 153 (224)
....++.+.. .+..+|..|-.||.+.-+.+. ++.... .+.+ ..++.-..+...+..-+.+..+....+|.-+
T Consensus 604 ~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~- 681 (1158)
T 3ei3_A 604 IIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN- 681 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-
T ss_pred CCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-
Confidence 2233333321 134678888899998666554 332221 1222 2344444444444433333334444445433
Q ss_pred CCcceecccCCcccceeeeEEEEeCCC-CeEEEEcCCCCeEEEEeCCCCCeEeeeeeeEeeCCceeEEEee
Q psy11351 154 SSPVAQFDHEGYYNSCTMKSCCFAGTQ-DEYVVSGSDDFVLYMWRVPRDDIYVSSDIYVCRHGSLEVSILP 223 (224)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~p 223 (224)
++....--.-..+.. -+.|+... .+-++..+ ++.++|..+.+-+.+ .....+|+.+.-.+..+|
T Consensus 682 ~~l~~s~l~~~~v~~----~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~-~~~~ipL~~Tprri~y~~ 746 (1158)
T 3ei3_A 682 HKLVFSNVNLKEVNY----MCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKL-HIRTVPLYESPRKICYQE 746 (1158)
T ss_dssp SSEEEEEBSSSCCCE----EEEECCSSSTTEEEEEC-SSCEEEEEECCSSSE-EEEEEECSSEEEEEEEEG
T ss_pred CceEEeccChHHhce----EeccCcccCCCcEEEEc-CCceEEEEecccCCe-eEEEEeCCCCceEEEEcC
Confidence 322211101111111 13343211 12233333 445999888665443 333344444444444443
No 330
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.56 E-value=0.16 Score=38.34 Aligned_cols=102 Identities=13% Similarity=0.133 Sum_probs=59.9
Q ss_pred cCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc-cceee---ccCCcCeEEEEEcCC---CCCeEEEecC---C----
Q psy11351 36 ERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE-EATEL---AVNSGPFHAVMFNPV---EARLVATANS---K---- 101 (224)
Q Consensus 36 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~---~~~~~~i~~~~~~~~---~~~~l~~~~~---d---- 101 (224)
-.....++|.|++ .++++ ..++.|.++| .+++ .+..+ .........|+++|+ ++.++++-+. +
T Consensus 28 l~~P~~ia~~pdG-~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGGG-RYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEETT-EEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCCC-eEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 3567899999998 55554 5569999997 3443 22211 122346889999993 2455444332 3
Q ss_pred CcEEEEecCCC-------ceeeE-eec-CCCceeEEEEcCCCCeEeee
Q psy11351 102 DGIALYDTRKP-------KEVLM-QYG-SCESCMSIRFNKAGTQLLGL 140 (224)
Q Consensus 102 g~v~i~d~~~~-------~~~~~-~~~-~~~~v~~~~~~~~~~~l~~~ 140 (224)
..|..|+.... +.+.. +.. .......++|.|+|.+.++.
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 56777776543 11111 111 11234679999999866654
No 331
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.26 E-value=0.3 Score=38.25 Aligned_cols=98 Identities=10% Similarity=0.168 Sum_probs=54.6
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCCceeeEEe---------ccCCeeEEEEcCC---CCcEEEEecC-----------
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASGDPIDFYL---------HERPVYGLSVDPS---QDAIFASACD----------- 57 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---------~~~~v~~~~~~~~---~~~~l~s~~~----------- 57 (224)
|++..+|+++++-...+.|++++..+++...... .......++|+|+ +..+.++-+.
T Consensus 32 ~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~ 111 (454)
T 1cru_A 32 LLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELP 111 (454)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSC
T ss_pred EEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccc
Confidence 4566778766665444579888876555432221 2456779999995 4244444432
Q ss_pred -CCEEEEEecCCc-------ccce-eec-cCCcCeEEEEEcCCCCCeEEEec
Q psy11351 58 -DGRVLLFDTRSR-------EEAT-ELA-VNSGPFHAVMFNPVEARLVATAN 99 (224)
Q Consensus 58 -d~~i~iwd~~~~-------~~~~-~~~-~~~~~i~~~~~~~~~~~~l~~~~ 99 (224)
...|.-++...+ +.+. .+. .....-..|+|.| ++.++++.+
T Consensus 112 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~G 162 (454)
T 1cru_A 112 NQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIG 162 (454)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEEC
T ss_pred cccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEEC
Confidence 234555554322 1111 121 1123468999999 777666643
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.25 E-value=0.24 Score=37.09 Aligned_cols=92 Identities=9% Similarity=-0.020 Sum_probs=45.3
Q ss_pred cceEEEEEeCC-CcEEEEeCCC--CceeeEEe---ccCCeeEEEEcCCCCcEEEEecC-C---------CEEEEEecCCc
Q psy11351 6 PIKVLRVIGND-DHVISHDMAS--GDPIDFYL---HERPVYGLSVDPSQDAIFASACD-D---------GRVLLFDTRSR 69 (224)
Q Consensus 6 ~~~~l~~~~~d-g~i~iwd~~~--~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~~-d---------~~i~iwd~~~~ 69 (224)
.+++++.|+.+ ..+.++|+.+ .+....-. ....-.+++.. ++ .+++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-DG-NLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-TT-EEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-CC-EEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 34566666543 4688899874 33322211 11111122222 34 67777776 2 46888998876
Q ss_pred ccc--eeeccCCcCeEEEEEcCCCCCeEEEecCC
Q psy11351 70 EEA--TELAVNSGPFHAVMFNPVEARLVATANSK 101 (224)
Q Consensus 70 ~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 101 (224)
+-. ..+......-.+++. . ++.+++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV-H-NGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE-E-TTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEE-E-CCEEEEEeCcC
Confidence 522 122211111122222 3 56788888754
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.17 E-value=0.37 Score=39.96 Aligned_cols=150 Identities=13% Similarity=0.067 Sum_probs=80.2
Q ss_pred cceEEEEEeCCC------cEEEEeCCCCceeeEE--eccCCeeEEEEcCCCCcEEEEecCCC--EEEEEecCCccccee-
Q psy11351 6 PIKVLRVIGNDD------HVISHDMASGDPIDFY--LHERPVYGLSVDPSQDAIFASACDDG--RVLLFDTRSREEATE- 74 (224)
Q Consensus 6 ~~~~l~~~~~dg------~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~- 74 (224)
.+++++.|+.++ .+.+||..+.+....- .....-.+.+...++ .+++.|+.++ .+.+||..+.+-...
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~-~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDG-NVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTS-CEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCC-EEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 556777777543 4788888876544322 111111223332355 6888887655 688999887652211
Q ss_pred ----eccCCcCeEEEEEcCCCCCeEEEecC--C-----CcEEEEecCCCce-----eeEeec---CCCceeEEEEcCCCC
Q psy11351 75 ----LAVNSGPFHAVMFNPVEARLVATANS--K-----DGIALYDTRKPKE-----VLMQYG---SCESCMSIRFNKAGT 135 (224)
Q Consensus 75 ----~~~~~~~i~~~~~~~~~~~~l~~~~~--d-----g~v~i~d~~~~~~-----~~~~~~---~~~~v~~~~~~~~~~ 135 (224)
+........++.+....+.+++.|+. + ..+.+||+.+..- ...... ....-.++....++.
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~ 609 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK 609 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE
Confidence 11112222345555523677777765 2 3588999987751 111111 111112223333366
Q ss_pred eEeeeec--------CCCcEEEECCCCCc
Q psy11351 136 QLLGLRR--------RLPPVLYNTRSSSP 156 (224)
Q Consensus 136 ~l~~~~~--------d~~v~v~d~~~~~~ 156 (224)
.++.|+. ...+.+||+.+.+-
T Consensus 610 iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 610 LLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp EEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred EEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 6676664 24588999887643
No 334
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.09 E-value=0.29 Score=36.55 Aligned_cols=141 Identities=11% Similarity=0.104 Sum_probs=86.2
Q ss_pred CCcEEEEeCCCCceeeEEeccCCeeEEEEc--CCCCcEEEEecC---CCEEEEEecCCc---ccc------eeecc---C
Q psy11351 16 DDHVISHDMASGDPIDFYLHERPVYGLSVD--PSQDAIFASACD---DGRVLLFDTRSR---EEA------TELAV---N 78 (224)
Q Consensus 16 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~--~~~~~~l~s~~~---d~~i~iwd~~~~---~~~------~~~~~---~ 78 (224)
.|.+.+|..+.+.....-+|.+....+... +...++++-+.. .+.++|-++... .+. ..+.. .
T Consensus 179 ~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~ 258 (365)
T 2xzh_A 179 VGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ 258 (365)
T ss_dssp EEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCT
T ss_pred ceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCcccc
Confidence 467889999877655555776555444332 111134443332 268999998543 111 11111 1
Q ss_pred CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcc
Q psy11351 79 SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPV 157 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~ 157 (224)
.+---++..++ .-..+..-+.-|.+++||+.++.++..-.-..+.|..-+.+....-++....+|.|.-..++....+
T Consensus 259 ~DFPVamqvs~-kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 259 NDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 336 (365)
T ss_dssp TCCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTHH
T ss_pred CCceEEEEecc-cCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccEe
Confidence 22334677777 6677888889999999999999887776666677766665555445555557776666666554433
No 335
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.05 E-value=0.32 Score=36.61 Aligned_cols=106 Identities=16% Similarity=0.194 Sum_probs=63.5
Q ss_pred ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccc--ceee----ccCCcCeEEEEEcCC---CCCeEEEe--cCCCc
Q psy11351 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREE--ATEL----AVNSGPFHAVMFNPV---EARLVATA--NSKDG 103 (224)
Q Consensus 35 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~----~~~~~~i~~~~~~~~---~~~~l~~~--~~dg~ 103 (224)
.-.....++|.|++ .++++--..|.|++++...++. +..+ .........|+++|+ ++.++++- ..++.
T Consensus 30 gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 30 GLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 34567899999998 6777766589999998655542 1111 223457899999993 24444431 23455
Q ss_pred EEEEecCCC----------ceeeE-ee-cCCCceeEEEEcCCCCeEeeee
Q psy11351 104 IALYDTRKP----------KEVLM-QY-GSCESCMSIRFNKAGTQLLGLR 141 (224)
Q Consensus 104 v~i~d~~~~----------~~~~~-~~-~~~~~v~~~~~~~~~~~l~~~~ 141 (224)
|.-|.+... +.+.. +. .....-..+.|.|+|.+.++.+
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 666655431 11111 11 1122346799999998666643
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.03 E-value=0.022 Score=42.64 Aligned_cols=109 Identities=13% Similarity=0.113 Sum_probs=67.3
Q ss_pred CeEEEecCCCcEEEEecCCCceeeEeecC-CCceeEEEEc--C-CCCeEeee-ecCCCcEEEECCCCCcceecccCCccc
Q psy11351 93 RLVATANSKDGIALYDTRKPKEVLMQYGS-CESCMSIRFN--K-AGTQLLGL-RRRLPPVLYNTRSSSPVAQFDHEGYYN 167 (224)
Q Consensus 93 ~~l~~~~~dg~v~i~d~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-~~d~~v~v~d~~~~~~~~~~~~~~~~~ 167 (224)
.+++.++.||.|.-+|..+++....+... ..++....-. + ++..++.. ..||.++.++..+|.....+.....+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47788889999999999999877766543 1222211100 1 22333333 589999999998885554442221111
Q ss_pred ceeeeEEEEe-------C---CCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 168 SCTMKSCCFA-------G---TQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 168 ~~~~~~~~~~-------~---~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
.+++... + ..+..+++|+.+|++...|+.+|+..
T Consensus 91 ---~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 91 ---TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp ---TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred ---ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 1111110 0 03577899999999999999999884
No 337
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.44 E-value=0.31 Score=36.71 Aligned_cols=137 Identities=7% Similarity=-0.008 Sum_probs=70.3
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCCceeeE-------E-eccCCeeEEEEcCC---CCcEEEEecC-------CCEEE
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASGDPIDF-------Y-LHERPVYGLSVDPS---QDAIFASACD-------DGRVL 62 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-------~-~~~~~v~~~~~~~~---~~~~l~s~~~-------d~~i~ 62 (224)
|++..+|+.+..+...|.|++++.. ++.... . ........++++|+ +..+.++-.. ...|.
T Consensus 23 i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~ 101 (353)
T 2g8s_A 23 LAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVG 101 (353)
T ss_dssp EEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEE
T ss_pred EEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEE
Confidence 4566677724444567999999854 322111 1 12346789999995 4245544332 23566
Q ss_pred EEecCCcc----cce----eec---cCCcCeEEEEEcCCCCCeEEEecC-------------CCcEEEEecCCCc-----
Q psy11351 63 LFDTRSRE----EAT----ELA---VNSGPFHAVMFNPVEARLVATANS-------------KDGIALYDTRKPK----- 113 (224)
Q Consensus 63 iwd~~~~~----~~~----~~~---~~~~~i~~~~~~~~~~~~l~~~~~-------------dg~v~i~d~~~~~----- 113 (224)
.+++..+. ... .+. .....-..+.|.| ++.++++.+. .|.|.-+|....-
T Consensus 102 r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~np 180 (353)
T 2g8s_A 102 YGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNP 180 (353)
T ss_dssp EEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCT
T ss_pred EEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCC
Confidence 66654321 111 111 1111235799999 7766665433 2456666654210
Q ss_pred -------eeeEeecCCCceeEEEEcC-CCCeEee
Q psy11351 114 -------EVLMQYGSCESCMSIRFNK-AGTQLLG 139 (224)
Q Consensus 114 -------~~~~~~~~~~~v~~~~~~~-~~~~l~~ 139 (224)
....+..--.....++|+| +|++.++
T Consensus 181 f~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 181 FIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEE
T ss_pred CcCCCCCCccEEEEcCcCccceEEECCCCCEEEE
Confidence 1111111123467899999 5554443
No 338
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.39 E-value=0.6 Score=35.14 Aligned_cols=135 Identities=16% Similarity=0.201 Sum_probs=70.9
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCCc-eeeEE----eccCCeeEEEEcCC---CCcEEEEecC---C----CEEEEEe
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASGD-PIDFY----LHERPVYGLSVDPS---QDAIFASACD---D----GRVLLFD 65 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~----~~~~~v~~~~~~~~---~~~~l~s~~~---d----~~i~iwd 65 (224)
|++..+|++++ +..+|.|++++. +++ .+..+ ........++++|+ +..++++-+. + ..|..|+
T Consensus 34 ia~~pdG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~ 111 (354)
T 3a9g_A 34 IAPLGGGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGR 111 (354)
T ss_dssp EEEEETTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEE
T ss_pred EEEcCCCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEE
Confidence 34555666444 456699999974 444 11111 12356889999997 4245444332 3 5677777
Q ss_pred cCCc--c-----cc-eeecc-CCcCeEEEEEcCCCCCeEEEecC-------------CCcEEEEecCCC--------cee
Q psy11351 66 TRSR--E-----EA-TELAV-NSGPFHAVMFNPVEARLVATANS-------------KDGIALYDTRKP--------KEV 115 (224)
Q Consensus 66 ~~~~--~-----~~-~~~~~-~~~~i~~~~~~~~~~~~l~~~~~-------------dg~v~i~d~~~~--------~~~ 115 (224)
.... . .+ ..+.. ....-..++|.| ++.++++.+. .|.|.-++.... ...
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~ 190 (354)
T 3a9g_A 112 LDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSP 190 (354)
T ss_dssp ECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCC
T ss_pred ECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCc
Confidence 6543 1 11 11221 111246799999 7777766432 244555554321 001
Q ss_pred eEeecCCCceeEEEEcC-CCCeEee
Q psy11351 116 LMQYGSCESCMSIRFNK-AGTQLLG 139 (224)
Q Consensus 116 ~~~~~~~~~v~~~~~~~-~~~~l~~ 139 (224)
....++ .....++|+| +++.+++
T Consensus 191 i~a~G~-rnp~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 191 IWSYGH-RNPQGIDWHRASGVMVAT 214 (354)
T ss_dssp EEEECC-SCCCEEEECTTTCCEEEE
T ss_pred EEEEcc-CCcceEEEeCCCCCEEEE
Confidence 111223 2346799999 5655444
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.25 E-value=0.81 Score=35.78 Aligned_cols=105 Identities=11% Similarity=0.120 Sum_probs=61.1
Q ss_pred cCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccc--ceeec------cCCcCeEEEEEcCC---CCCeEEEecC----
Q psy11351 36 ERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREE--ATELA------VNSGPFHAVMFNPV---EARLVATANS---- 100 (224)
Q Consensus 36 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~~------~~~~~i~~~~~~~~---~~~~l~~~~~---- 100 (224)
-.....++|.|+| .++++-...+.|++++..+++. +..+. ........|+|+|+ ++.++++-+.
T Consensus 26 l~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 3466799999998 6777665545788887654442 22221 12456789999994 3444444322
Q ss_pred --------CCcEEEEecCCC-------ceeeE-ee-cCCCceeEEEEcCCCCeEeeee
Q psy11351 101 --------KDGIALYDTRKP-------KEVLM-QY-GSCESCMSIRFNKAGTQLLGLR 141 (224)
Q Consensus 101 --------dg~v~i~d~~~~-------~~~~~-~~-~~~~~v~~~~~~~~~~~l~~~~ 141 (224)
...|.-|+.... +.+.. +. ........|+|.|+|.+.++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555655322 11111 11 1223568899999998666543
No 340
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.85 E-value=1.1 Score=35.02 Aligned_cols=140 Identities=11% Similarity=0.097 Sum_probs=89.1
Q ss_pred CCcEEEEeCCCCceeeEEeccCCeeEEEEcC--CCCcEEEEecCC---CEEEEEecCCc---cc------ceeec---cC
Q psy11351 16 DDHVISHDMASGDPIDFYLHERPVYGLSVDP--SQDAIFASACDD---GRVLLFDTRSR---EE------ATELA---VN 78 (224)
Q Consensus 16 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~s~~~d---~~i~iwd~~~~---~~------~~~~~---~~ 78 (224)
.|.+.+|..+.+.....-+|.+....+...- ...++++-+... +.++|-++... .+ +..+. ..
T Consensus 178 ~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~ 257 (494)
T 1bpo_A 178 VGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ 257 (494)
T ss_dssp EEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTST
T ss_pred cceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccc
Confidence 4678899998876665557766655554432 111344444332 79999998543 11 01111 11
Q ss_pred CcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCc
Q psy11351 79 SGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSP 156 (224)
Q Consensus 79 ~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~ 156 (224)
.+---++..++ ....+..-+.-|.+++||+.++.++..-.-..+.|..-+.+....-++....+|.|.-..++....
T Consensus 258 ~DFPvamqvs~-kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 258 NDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp TCCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred cCceeEEEecc-cCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 22335777888 677788888999999999999988777666667776666665555556566777766666655433
No 341
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.70 E-value=0.98 Score=33.95 Aligned_cols=137 Identities=12% Similarity=0.194 Sum_probs=75.4
Q ss_pred CCCCCcceEEEEEeCCCcEEEEeCCCCceeeEE-------eccCCeeEEEEcCC---CCcEEEE--ecCCCEEEEEecCC
Q psy11351 1 MASGDPIKVLRVIGNDDHVISHDMASGDPIDFY-------LHERPVYGLSVDPS---QDAIFAS--ACDDGRVLLFDTRS 68 (224)
Q Consensus 1 ~a~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~v~~~~~~~~---~~~~l~s--~~~d~~i~iwd~~~ 68 (224)
||+..+|+++++--..|.|++++..+++..... ........++++|+ +..+.++ ...+..|.-|....
T Consensus 37 ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~ 116 (347)
T 3das_A 37 LAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDE 116 (347)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCT
T ss_pred EEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCC
Confidence 456677777776655899999987666543221 23567899999995 3234443 23455666666554
Q ss_pred cc--------cc---eeec-cCCcCeEEEEEcCCCCCeEEEecC-------------CCcEEEEecCCC--------cee
Q psy11351 69 RE--------EA---TELA-VNSGPFHAVMFNPVEARLVATANS-------------KDGIALYDTRKP--------KEV 115 (224)
Q Consensus 69 ~~--------~~---~~~~-~~~~~i~~~~~~~~~~~~l~~~~~-------------dg~v~i~d~~~~--------~~~ 115 (224)
+. .. ..+. .....-..+.|.| ++.++++.+. .|.|.-.+.... ...
T Consensus 117 ~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~ 195 (347)
T 3das_A 117 KKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSP 195 (347)
T ss_dssp TSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCC
T ss_pred CCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCe
Confidence 21 11 1121 1112346799999 7777766432 244444444321 001
Q ss_pred eEeecCCCceeEEEEcCCCCeEee
Q psy11351 116 LMQYGSCESCMSIRFNKAGTQLLG 139 (224)
Q Consensus 116 ~~~~~~~~~v~~~~~~~~~~~l~~ 139 (224)
..-.++ .....++|+|+|.+.++
T Consensus 196 i~a~G~-RNp~Gla~dp~G~L~~~ 218 (347)
T 3das_A 196 VYSYGH-RNVQGLAWDDKQRLFAS 218 (347)
T ss_dssp EEEBCC-SBCCEEEECTTCCEEEE
T ss_pred EEeeCC-CCcceEEECCCCCEEEE
Confidence 111133 23567999998776554
No 342
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.43 E-value=3 Score=34.82 Aligned_cols=177 Identities=10% Similarity=0.108 Sum_probs=92.4
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeEE-eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec-----cCCcCe
Q psy11351 9 VLRVIGNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA-----VNSGPF 82 (224)
Q Consensus 9 ~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-----~~~~~i 82 (224)
.|-.|+.+| +..||..+.+..... .....|.++.. .++ . |..++.+ -+..+|..+++.. .+. .....|
T Consensus 75 ~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~-lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i 148 (758)
T 3ott_A 75 YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-T-LWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTI 148 (758)
T ss_dssp EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-E-EEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCE
T ss_pred cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-c-EEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeE
Confidence 344555554 778888776443211 12335666654 344 3 4445555 6778888765432 221 113468
Q ss_pred EEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeec-----CCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcc
Q psy11351 83 HAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG-----SCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPV 157 (224)
Q Consensus 83 ~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~ 157 (224)
.++.... ++.+.+ |+.+ .+..||..+.+....... ....|.++...+++..|..++.. -+..+|..+++..
T Consensus 149 ~~i~~d~-~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~-Gl~~~~~~~~~~~ 224 (758)
T 3ott_A 149 YSIIRTK-DNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG-YLFQYFPSTGQIK 224 (758)
T ss_dssp EEEEECT-TCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEE-EEEEEETTTTEEE
T ss_pred EEEEEcC-CCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECC-CCeEEcCCCCeEE
Confidence 8888877 566555 3344 577888776532211111 12247888887777755555544 4888887765422
Q ss_pred eecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCC
Q psy11351 158 AQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDD 202 (224)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~ 202 (224)
.+.. ...-.+..+.... ++.+ ..|+.+ -+.+++..+++
T Consensus 225 -~~~~---l~~~~i~~i~~d~-~g~l-WigT~~-Gl~~~~~~~~~ 262 (758)
T 3ott_A 225 -QTEA---FHNNSIKSLALDG-NGDL-LAGTDN-GLYVYHNDTTP 262 (758)
T ss_dssp -EEEE---EEEEEEEEEEECT-TCCE-EEEETT-EEEEECCTTSC
T ss_pred -eccC---CCCCeEEEEEEcC-CCCE-EEEeCC-ceeEEecCCCc
Confidence 1210 0111122233332 3444 334444 47777766543
No 343
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.05 E-value=3.8 Score=37.11 Aligned_cols=143 Identities=11% Similarity=0.198 Sum_probs=86.6
Q ss_pred CCcEEEEeCCC-CceeeEE-ec----cCCeeEEEEcCCCCcEEE-Ee------cCCCEEEEEecCCcccceeeccCCcCe
Q psy11351 16 DDHVISHDMAS-GDPIDFY-LH----ERPVYGLSVDPSQDAIFA-SA------CDDGRVLLFDTRSREEATELAVNSGPF 82 (224)
Q Consensus 16 dg~i~iwd~~~-~~~~~~~-~~----~~~v~~~~~~~~~~~~l~-s~------~~d~~i~iwd~~~~~~~~~~~~~~~~i 82 (224)
+..|.-|++.. ..+.+.+ .| ...|..-..+++. ++++ +| .-.|.+.+|.++.+. .+.+.+|....
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~-kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F 201 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQ-KWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASF 201 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCC-CeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhh
Confidence 45799999974 3455555 33 4566666778887 5554 33 245889999887553 44556665544
Q ss_pred EEEEEc--CCCCCeEEEec---CCCcEEEEecCCC---ceeeE------eec---CCCceeEEEEcCCCCeEeeeecCCC
Q psy11351 83 HAVMFN--PVEARLVATAN---SKDGIALYDTRKP---KEVLM------QYG---SCESCMSIRFNKAGTQLLGLRRRLP 145 (224)
Q Consensus 83 ~~~~~~--~~~~~~l~~~~---~dg~v~i~d~~~~---~~~~~------~~~---~~~~v~~~~~~~~~~~l~~~~~d~~ 145 (224)
..+... +....+++.+. ..++++|.++... ..... +.. ..+...++..++.-..++.-+.-|.
T Consensus 202 ~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~ 281 (1630)
T 1xi4_A 202 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY 281 (1630)
T ss_pred heeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce
Confidence 333332 11122333222 2378999988543 11110 111 2334456777887778888888999
Q ss_pred cEEEECCCCCcceec
Q psy11351 146 PVLYNTRSSSPVAQF 160 (224)
Q Consensus 146 v~v~d~~~~~~~~~~ 160 (224)
+++||+.++..+..-
T Consensus 282 ~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 282 IHLYDLETGTCIYMN 296 (1630)
T ss_pred EEEEecccchhhhhc
Confidence 999999999887654
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.98 E-value=3 Score=33.65 Aligned_cols=122 Identities=7% Similarity=-0.036 Sum_probs=77.7
Q ss_pred cEEEEeCCC----Ccee-eEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccc-------------ceeeccCC
Q psy11351 18 HVISHDMAS----GDPI-DFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREE-------------ATELAVNS 79 (224)
Q Consensus 18 ~i~iwd~~~----~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-------------~~~~~~~~ 79 (224)
.|.+.|... +..+ ..+.-......+.++|+|...++++-.+.++.++|+++-.. ....+. .
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-G 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-C
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-C
Confidence 477888766 3333 33366677788999999966677788899999999975321 111121 2
Q ss_pred cCeEEEEEcCCCCCeEEEecCCCcEEEEecCCC----------ceeeEeecCCCceeEE-----EEcCCCCeEeeee
Q psy11351 80 GPFHAVMFNPVEARLVATANSKDGIALYDTRKP----------KEVLMQYGSCESCMSI-----RFNKAGTQLLGLR 141 (224)
Q Consensus 80 ~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~----------~~~~~~~~~~~~v~~~-----~~~~~~~~l~~~~ 141 (224)
..-...+|.+ +++...+---|..|..|++... ..+..+.-|..+-.-. .-.|+|++|++..
T Consensus 378 lGPlHt~Fd~-~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 378 LGPLHTTFDG-RGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp SCEEEEEECS-SSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred CcccEEEECC-CCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 2457789999 7766666668999999998743 1222233233222111 1257888888864
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.32 E-value=5.1 Score=34.64 Aligned_cols=37 Identities=14% Similarity=0.095 Sum_probs=31.7
Q ss_pred ceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec
Q psy11351 124 SCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 160 (224)
.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4566777788889999999999999999999877765
No 346
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.84 E-value=3.8 Score=32.14 Aligned_cols=106 Identities=11% Similarity=0.106 Sum_probs=58.9
Q ss_pred CCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc---cceeec---------cCCcCeEEEEEcCC---CCCeEEEecC-
Q psy11351 37 RPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE---EATELA---------VNSGPFHAVMFNPV---EARLVATANS- 100 (224)
Q Consensus 37 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~~---------~~~~~i~~~~~~~~---~~~~l~~~~~- 100 (224)
.....|+|.|++...++.+...|.|++++..... .+..+. ..+.....|+|+|+ ++.++++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4567999999983245556678999999754221 122111 11456889999993 1344443221
Q ss_pred -C----------CcEEEEecCC----------CceeeEee--cCCCceeEEEEcCCCCeEeeeec
Q psy11351 101 -K----------DGIALYDTRK----------PKEVLMQY--GSCESCMSIRFNKAGTQLLGLRR 142 (224)
Q Consensus 101 -d----------g~v~i~d~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 142 (224)
+ ..|.-|.+.. .+.+..+. .....-..|+|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 1344455532 12222222 12234678999999976665443
No 347
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.26 E-value=5.4 Score=34.48 Aligned_cols=37 Identities=5% Similarity=0.109 Sum_probs=30.6
Q ss_pred CeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceee
Q psy11351 38 PVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATEL 75 (224)
Q Consensus 38 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 75 (224)
.+.++...++. .++++-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~-~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTT-TEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCC-cEEEEEECCCEEEEEECCCCCeEeee
Confidence 56677777776 79999999999999999999876654
No 348
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=90.66 E-value=3.6 Score=29.76 Aligned_cols=166 Identities=10% Similarity=0.037 Sum_probs=79.9
Q ss_pred CCcEEEEeCCCCceeeE-EeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEEEEcCCCCCe
Q psy11351 16 DDHVISHDMASGDPIDF-YLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARL 94 (224)
Q Consensus 16 dg~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 94 (224)
||.|..|-.+..-.+-. ..-...|..++.-... .++. . ||.|..|-......+..-......|..++.-. ..
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~h--s~al-~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~---~~ 152 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWA--SYAL-K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGV---YT 152 (282)
T ss_dssp TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTE--EEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECS---SE
T ss_pred CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCE--EEEE-e-CCeEEEecCCCCCcCCCCccCCCCeEEEEccc---CE
Confidence 77777776553211110 1123467777766443 2332 3 88999997654322211112234577776543 22
Q ss_pred EEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec-ccCCcccceeeeE
Q psy11351 95 VATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKS 173 (224)
Q Consensus 95 l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~ 173 (224)
.+.-. ||.|..|-......+.........|..++...+.. ++. .|+.|+.|=......+..- .....+..+.
T Consensus 153 ~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~--- 225 (282)
T 3qhy_B 153 ALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIA--- 225 (282)
T ss_dssp EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEE---
T ss_pred EEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCCCCcccCCCceEEE---
Confidence 22333 68888887654322211111234566666544322 233 5888999865443222111 1112232222
Q ss_pred EEEeCCCCeEEEEcCCCCeEEEEeCCCC
Q psy11351 174 CCFAGTQDEYVVSGSDDFVLYMWRVPRD 201 (224)
Q Consensus 174 ~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 201 (224)
. .....+.-. ||.|+.|-....
T Consensus 226 --~---G~~h~~al~-~g~v~~wG~n~~ 247 (282)
T 3qhy_B 226 --S---GEWYSLALK-NGKVIAWGSSRT 247 (282)
T ss_dssp --E---CSSCEEEEE-TTEEEEESTTCC
T ss_pred --c---CCCEEEEEE-CCEEEEecCCCC
Confidence 2 222222223 899999966543
No 349
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=89.88 E-value=4.3 Score=29.38 Aligned_cols=165 Identities=8% Similarity=0.034 Sum_probs=84.8
Q ss_pred CCcEEEEeCCCCceeeE-EeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccCCcCeEEEEEcCCCCCe
Q psy11351 16 DDHVISHDMASGDPIDF-YLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARL 94 (224)
Q Consensus 16 dg~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 94 (224)
||+|..|-.+..-.+.. ......|..++..... .++. . ||.+..|-......+..-..-...|..++... .+
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h--s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~---~h 113 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH--SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGA---WA 113 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE--EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEET---TE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE--EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcC---CE
Confidence 89999997654321111 1223467777776543 3444 4 89999997654322211111134677777654 34
Q ss_pred EEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec-ccCCcccceeeeE
Q psy11351 95 VATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF-DHEGYYNSCTMKS 173 (224)
Q Consensus 95 l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~~~~~~~~~~~~~ 173 (224)
.+.-. +|.|..|-......+.........|..++...+. .+.-. |+.|+.|-.....++... .....+..
T Consensus 114 s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~----- 184 (282)
T 3qhy_B 114 SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDD----- 184 (282)
T ss_dssp EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEE-----
T ss_pred EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCCCCCceecCCCeEE-----
Confidence 44444 8999999765432221111223456666554432 22223 688888866543222111 11122222
Q ss_pred EEEeCCCCeEEEEcCCCCeEEEEeCCC
Q psy11351 174 CCFAGTQDEYVVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 174 ~~~~~~~~~~l~s~~~d~~v~iw~~~~ 200 (224)
++.. ....++. .||.|+.|-...
T Consensus 185 i~~G--~~hs~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 185 VAGG--IFHSLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp EEEC--SSEEEEE--ETTEEEEEECCT
T ss_pred EEec--CCEEEEE--ECCeEEEEECCC
Confidence 2221 2233444 599999997654
No 350
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.94 E-value=0.9 Score=36.55 Aligned_cols=77 Identities=6% Similarity=-0.028 Sum_probs=50.8
Q ss_pred CceeEEEEcCCCCeEeeee-cCCCcEEEECCCCCc-----c----eecccCCcccceeeeEEEEeCCCCeEEEEcCCCCe
Q psy11351 123 ESCMSIRFNKAGTQLLGLR-RRLPPVLYNTRSSSP-----V----AQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFV 192 (224)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~-~d~~v~v~d~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 192 (224)
.....+..+|||+++++++ .+.++.++|.+.... + ... ....-..+.-...+|.+ ++....|--.|.+
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~-~ae~e~GlGPlHt~Fd~-~G~aYTtlfidSq 400 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVI-VGEPELGLGPLHTTFDG-RGNAYTTLFIDSQ 400 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGE-EECCBCCSCEEEEEECS-SSEEEEEETTTTE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccce-EeeccCCCcccEEEECC-CCceEeeeeecce
Confidence 4456789999999988876 577899999874211 1 111 00111122233467877 6777888889999
Q ss_pred EEEEeCCCC
Q psy11351 193 LYMWRVPRD 201 (224)
Q Consensus 193 v~iw~~~~~ 201 (224)
|.-|++...
T Consensus 401 vvkWni~~a 409 (638)
T 3sbq_A 401 VVKWNMEEA 409 (638)
T ss_dssp EEEEEHHHH
T ss_pred EEEEeccHH
Confidence 999999753
No 351
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=88.00 E-value=7.4 Score=29.66 Aligned_cols=161 Identities=11% Similarity=0.178 Sum_probs=93.3
Q ss_pred CCeeEEEEcCCCCcEEEEecC--------------CCEEEEEecCCc--ccceeecc------CCcCeEEEEEc---CC-
Q psy11351 37 RPVYGLSVDPSQDAIFASACD--------------DGRVLLFDTRSR--EEATELAV------NSGPFHAVMFN---PV- 90 (224)
Q Consensus 37 ~~v~~~~~~~~~~~~l~s~~~--------------d~~i~iwd~~~~--~~~~~~~~------~~~~i~~~~~~---~~- 90 (224)
-.|..+...+.+.-+++=.+. --+|.+||+.++ +.++.+.- ..+.+..+.+. |.
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 357777777766222222111 236889999999 77666532 23467888887 21
Q ss_pred --CCCeEEEe-cCCCcEEEEecCCCceeeEee----c--------------CCCceeEEEEcCC----CCeEeeeecCCC
Q psy11351 91 --EARLVATA-NSKDGIALYDTRKPKEVLMQY----G--------------SCESCMSIRFNKA----GTQLLGLRRRLP 145 (224)
Q Consensus 91 --~~~~l~~~-~~dg~v~i~d~~~~~~~~~~~----~--------------~~~~v~~~~~~~~----~~~l~~~~~d~~ 145 (224)
+..++..+ +....|.+||+.+++...... . -...+..++++|+ ++.|+-....+
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss- 245 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA- 245 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-
Confidence 13343333 356789999999876543321 0 0246788999998 67777665544
Q ss_pred cEEEECCC-----C---CcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCC
Q psy11351 146 PVLYNTRS-----S---SPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 146 v~v~d~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~ 200 (224)
-++|.+.+ . ..+..++..+.... -...+..+.++.++++--....|..|+..+
T Consensus 246 ~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~--~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 246 IKVYSVNTKELKQKGGKLNPELLGNRGKYND--AIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp SEEEEEEHHHHSSTTCCCCCEEEEECCTTCC--EEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred CcEEEEEHHHhhCcchhhceEEeeecCCCCC--cceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 35555432 1 12222222221111 111333333688888888889999999876
No 352
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=87.25 E-value=12 Score=31.22 Aligned_cols=137 Identities=12% Similarity=0.100 Sum_probs=79.2
Q ss_pred EEeCCCcEEEEeCCCCceeeEE--e-----ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc-----ccc---eeec
Q psy11351 12 VIGNDDHVISHDMASGDPIDFY--L-----HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR-----EEA---TELA 76 (224)
Q Consensus 12 ~~~~dg~i~iwd~~~~~~~~~~--~-----~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-----~~~---~~~~ 76 (224)
.|+ ++-+..+|.++++..... . ....|.++...+++ . |-.|+..+-+.++|.++. ... ..+.
T Consensus 388 igt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~-lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 464 (758)
T 3ott_A 388 IAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAG-Q-LWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYS 464 (758)
T ss_dssp EEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTS-E-EEEEESSSCEEEEEHHHHHHCCSSEEECSEEEC
T ss_pred EEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCC-C-EEEEECCCceEEEccccccccCCcceecccccc
Confidence 344 456888998887654432 1 23458888877776 4 444555556777885431 111 1111
Q ss_pred ---c-CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCceeeEeecC----CCceeEEEEcCCCCeEeeeecCCCcEE
Q psy11351 77 ---V-NSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYGS----CESCMSIRFNKAGTQLLGLRRRLPPVL 148 (224)
Q Consensus 77 ---~-~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~v~v 148 (224)
+ ....|.++...+ ++.+.+.++..+.+..+|..+.+. ..+... ...+.++....+|...+. +.+| +..
T Consensus 465 ~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~Gl~~~d~~~~~~-~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~G-l~~ 540 (758)
T 3ott_A 465 VHNGLSGMFINQIIPDN-EGNVWVLLYNNKGIDKINPRTREV-TKLFADELTGEKSPNYLLCDEDGLLWVG-FHGG-VMR 540 (758)
T ss_dssp GGGTCSCSCEEEEEECT-TSCEEEEETTCSSEEEEETTTTEE-EEECTTTSCGGGCEEEEEECTTSCEEEE-ETTE-EEE
T ss_pred cccccccceeeeEEEcC-CCCEEEEccCCCCcEEEeCCCCce-EEecCCCcCCCcccceEEECCCCCEEEE-ecCc-eEE
Confidence 1 123588998888 677666333345688889876643 333211 235677877777776654 4455 888
Q ss_pred EECCCCC
Q psy11351 149 YNTRSSS 155 (224)
Q Consensus 149 ~d~~~~~ 155 (224)
++..+++
T Consensus 541 ~~~~~~~ 547 (758)
T 3ott_A 541 INPKDES 547 (758)
T ss_dssp ECC--CC
T ss_pred EecCCCc
Confidence 8876554
No 353
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=84.80 E-value=9.6 Score=27.88 Aligned_cols=127 Identities=6% Similarity=0.048 Sum_probs=66.6
Q ss_pred CCcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEecCC-------------CEEEEEecCCcccceeeccCCcCe
Q psy11351 16 DDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDD-------------GRVLLFDTRSREEATELAVNSGPF 82 (224)
Q Consensus 16 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~i 82 (224)
++.|...+.+.....+.... . +--+++++..+..+...+ ..|+..++...+.. .+.. ..
T Consensus 36 ~~~ly~~~~dg~~~~~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~--~~- 107 (302)
T 3s25_A 36 NGRLYAMNIDGSNIHKLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDP--DP- 107 (302)
T ss_dssp TTEEEEEETTSCSCEEEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEEC--SC-
T ss_pred CceEEEEcCCCCCCEEccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-Eeec--CC-
Confidence 45566666655554444322 1 234567774344443332 46777777665432 2222 12
Q ss_pred EEEEEcCCCCCeEEEec----CCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeec-CCCcEEEECCCCCcc
Q psy11351 83 HAVMFNPVEARLVATAN----SKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRR-RLPPVLYNTRSSSPV 157 (224)
Q Consensus 83 ~~~~~~~~~~~~l~~~~----~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~v~d~~~~~~~ 157 (224)
...|++ .+..|+-.. .+..|...++... ....+..+.. ..++++++.|+-.+. ...|.+.++..+...
T Consensus 108 -~~~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~ 180 (302)
T 3s25_A 108 -CIYASL-IGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA 180 (302)
T ss_dssp -EEEEEE-ETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE
T ss_pred -ccEEEE-eCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE
Confidence 225666 555555443 3344555565533 3344443322 456788888876654 566777777665433
No 354
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=84.06 E-value=10 Score=27.69 Aligned_cols=162 Identities=9% Similarity=0.030 Sum_probs=81.8
Q ss_pred CcEEEEeCCCCceeeEEeccCCeeEEEEcCCCCcEEEEec----CCCEEEEEecCCcccceeeccCCcCeEEEEEcCCCC
Q psy11351 17 DHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASAC----DDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEA 92 (224)
Q Consensus 17 g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----~d~~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~ 92 (224)
..|+..++...+...... .. ...|++++ +.|+-.. .+..|...++.... ...+..+.. ..+++.+.
T Consensus 88 ~~Iy~i~~dg~~~~~l~~--~~--~~~~s~~g-~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~ 157 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLDP--DP--CIYASLIG-NYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDR 157 (302)
T ss_dssp EEEEEEETTSCCCEEEEC--SC--EEEEEEET-TEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETT
T ss_pred CeEEEEeCCCCcceEeec--CC--ccEEEEeC-CEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECC
Confidence 467777887766444332 22 23567777 4554433 44566666665333 334433322 34566344
Q ss_pred CeEEEecCCCcEEEEecCCCceeeEeecCCCceeEEEEcCCCCeEeeeecCC--CcEEEECCCCCcceecccCCccccee
Q psy11351 93 RLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQLLGLRRRL--PPVLYNTRSSSPVAQFDHEGYYNSCT 170 (224)
Q Consensus 93 ~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~v~d~~~~~~~~~~~~~~~~~~~~ 170 (224)
.++.+......|...++...... .+.. +... ..+.|++.+|+-...++ .|..-++.... ...+.. ..+
T Consensus 158 ~iy~t~~g~~~Iy~~~l~g~~~~-~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~-~~~---- 227 (302)
T 3s25_A 158 YFYYNNPKNGQLYRYDTASQSEA-LFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE-ANI---- 227 (302)
T ss_dssp EEEEECTTTCCEEEEETTTTEEE-EEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC-SCE----
T ss_pred EEEEEeCCCceEEEEECCCCCEE-EEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC-CCc----
Confidence 44445444677888887765433 3332 2222 34568999888765443 34444555433 233321 111
Q ss_pred eeEEEEeCCCCeEEEEc--CCCCeEEEEeCCCCC
Q psy11351 171 MKSCCFAGTQDEYVVSG--SDDFVLYMWRVPRDD 202 (224)
Q Consensus 171 ~~~~~~~~~~~~~l~s~--~~d~~v~iw~~~~~~ 202 (224)
..+.| ++.+|.-+ ...+.|..-++....
T Consensus 228 ---~~~~~-~g~~Iy~~~~~~~~~i~~~~~DG~~ 257 (302)
T 3s25_A 228 ---EHYNV-YGSLIFYQRGGDNPALCVVKNDGTG 257 (302)
T ss_dssp ---EEEEE-ETTEEEEEECSSSCEEEEEETTSCC
T ss_pred ---ceEEE-CCCEEEEEECCCCcEEEEEECCCCc
Confidence 12444 34444432 334567776766543
No 355
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=80.18 E-value=17 Score=27.44 Aligned_cols=163 Identities=12% Similarity=0.076 Sum_probs=74.2
Q ss_pred CeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeecc-----C--------CcCeEEEEEcCCCCCeEEEecCCCcE
Q psy11351 38 PVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAV-----N--------SGPFHAVMFNPVEARLVATANSKDGI 104 (224)
Q Consensus 38 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-----~--------~~~i~~~~~~~~~~~~l~~~~~dg~v 104 (224)
.+.++.++|..+..+..+..++-|...+ ..++....+.. + ...+.++.++|.++..+..+...+ |
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l 255 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-I 255 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-E
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-E
Confidence 5788999985434444454444444332 12222111110 0 124889999985456666665544 4
Q ss_pred EEEecCCCceeeEeec--CC---CceeEEEEcCC-CCeEeeeec-----------CCCcEEEECCC-CCcceecc--cCC
Q psy11351 105 ALYDTRKPKEVLMQYG--SC---ESCMSIRFNKA-GTQLLGLRR-----------RLPPVLYNTRS-SSPVAQFD--HEG 164 (224)
Q Consensus 105 ~i~d~~~~~~~~~~~~--~~---~~v~~~~~~~~-~~~l~~~~~-----------d~~v~v~d~~~-~~~~~~~~--~~~ 164 (224)
...+- .++.-..+.. .. ..+..+.++|. ...+.++.. ++...+|.... ++.-..+. ...
T Consensus 256 ~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~ 334 (394)
T 3b7f_A 256 YRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPT 334 (394)
T ss_dssp EEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCC
T ss_pred EEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCC
Confidence 33331 1222222211 11 34567888763 344444432 23345665543 33333321 111
Q ss_pred --cccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCCCCeE
Q psy11351 165 --YYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPRDDIY 204 (224)
Q Consensus 165 --~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~ 204 (224)
....+....++++|.+...|+.++.++.|.. ....++-+
T Consensus 335 ~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~-S~D~G~tW 375 (394)
T 3b7f_A 335 DQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWA-SADEGEHW 375 (394)
T ss_dssp SSCCCCCCTBSEEECCSSSCCEEEECTTSCEEE-ESSTTSBC
T ss_pred ccccceEEEEEEEECCCCCCEEEEEeCCCeEEE-ECCCCCCc
Confidence 0000001235566644455666665665543 23445444
No 356
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=78.56 E-value=29 Score=29.27 Aligned_cols=63 Identities=14% Similarity=0.181 Sum_probs=38.7
Q ss_pred cCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeecc-------CCcCeEEEEEcCCCCCeEEEec
Q psy11351 36 ERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAV-------NSGPFHAVMFNPVEARLVATAN 99 (224)
Q Consensus 36 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~l~~~~ 99 (224)
.+.|.+|+++|.++..+..+...+.|...+ ..++.-..+.. ....+.+++++|.+...++.+.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 468999999998667777777767665443 22322222211 1246999999985445554443
No 357
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=77.96 E-value=20 Score=27.03 Aligned_cols=137 Identities=11% Similarity=-0.095 Sum_probs=65.4
Q ss_pred eEEEEEeCCCcEEEEeCCC-Cc-eeeE--EeccCCeeEEEEcCCCCcEEEEecCCC----EEEEEecCCcccceeec---
Q psy11351 8 KVLRVIGNDDHVISHDMAS-GD-PIDF--YLHERPVYGLSVDPSQDAIFASACDDG----RVLLFDTRSREEATELA--- 76 (224)
Q Consensus 8 ~~l~~~~~dg~i~iwd~~~-~~-~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~d~----~i~iwd~~~~~~~~~~~--- 76 (224)
..|..|...| +.+++... ++ .... ......|.++.+.|..+..+..+...+ .|...+ ..++.-..+.
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccc
Confidence 3566677777 55555432 22 2221 122457999999983223444444444 443332 2222211111
Q ss_pred ---c--------CCcCeEEEEEcCCC-CCeEEEecCCCcEEEEecCCCceeeEee-------------------cCCCce
Q psy11351 77 ---V--------NSGPFHAVMFNPVE-ARLVATANSKDGIALYDTRKPKEVLMQY-------------------GSCESC 125 (224)
Q Consensus 77 ---~--------~~~~i~~~~~~~~~-~~~l~~~~~dg~v~i~d~~~~~~~~~~~-------------------~~~~~v 125 (224)
. ....|.++++.|.+ ...+..++..+.|...+= .++.-..+. .....+
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i 179 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKM 179 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCce
Confidence 1 11247789998743 455555555555444321 122211111 012357
Q ss_pred eEEEEcCC-CCeEeeeecCCCcE
Q psy11351 126 MSIRFNKA-GTQLLGLRRRLPPV 147 (224)
Q Consensus 126 ~~~~~~~~-~~~l~~~~~d~~v~ 147 (224)
.+|.++|. ...++.+..++.|.
T Consensus 180 ~~i~~d~~~~~~l~vg~~~ggl~ 202 (394)
T 3b7f_A 180 HSILVDPRDPKHLYIGMSSGGVF 202 (394)
T ss_dssp EEEEECTTCTTCEEEEEETBEEE
T ss_pred eEEEECCCCCCEEEEEECCCCEE
Confidence 88999884 44555554444343
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.93 E-value=6.1 Score=34.91 Aligned_cols=37 Identities=14% Similarity=0.095 Sum_probs=29.6
Q ss_pred ceeEEEEcCCCCeEeeeecCCCcEEEECCCCCcceec
Q psy11351 124 SCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQF 160 (224)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 160 (224)
.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3445566677889999999999999999998776654
No 359
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=76.62 E-value=17 Score=29.56 Aligned_cols=58 Identities=14% Similarity=0.091 Sum_probs=38.7
Q ss_pred eEEEEEcCCCCCeEEEecCC------------CcEEEEecCCCceeeEeec-CCCceeEEEEcCCCCeEeee
Q psy11351 82 FHAVMFNPVEARLVATANSK------------DGIALYDTRKPKEVLMQYG-SCESCMSIRFNKAGTQLLGL 140 (224)
Q Consensus 82 i~~~~~~~~~~~~l~~~~~d------------g~v~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 140 (224)
---|+|+| .+++++.-..+ ..+.+.+..+++....+.. ....++.++|+||++.|++.
T Consensus 478 PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35688999 77766664322 2355566666654333333 56789999999999988775
No 360
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=75.83 E-value=21 Score=26.22 Aligned_cols=186 Identities=7% Similarity=0.059 Sum_probs=98.9
Q ss_pred cceEEEEEeCCCcEEEEeCCCCceee---------EEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCC--------
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDPID---------FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRS-------- 68 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~~~---------~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-------- 68 (224)
+..++++.+.+|.|+--.+..-+... .+.-...+..+...... ..++..+..|.++-.....
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~-~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTH-DYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETT-CEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCC-CEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 44678899999999988765332111 11223344444444333 4566666778877665431
Q ss_pred -ccc---ceeeccCCcCeEEEEEcCC--CCCeEEEecCCCcEEEEecCCCc-------eeeEeecCCCceeEEEEcCCCC
Q psy11351 69 -REE---ATELAVNSGPFHAVMFNPV--EARLVATANSKDGIALYDTRKPK-------EVLMQYGSCESCMSIRFNKAGT 135 (224)
Q Consensus 69 -~~~---~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~dg~v~i~d~~~~~-------~~~~~~~~~~~v~~~~~~~~~~ 135 (224)
|.+ ...+.. ...|..+...+. ....++..+..|.++.-.+.... ....+. ..+.+..+.......
T Consensus 86 ~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~-~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLN-DKDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCC-TTCCEEEEEEECTTC
T ss_pred CCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecC-CCCEEEEEEEeCCCC
Confidence 111 112222 234444433221 34567777899999888764321 111122 345666665555556
Q ss_pred eEeeeecCCCcEEEECCCCCc---------ceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCC
Q psy11351 136 QLLGLRRRLPPVLYNTRSSSP---------VAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 136 ~l~~~~~d~~v~v~d~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~ 200 (224)
.++..+.+|.+..+....-.. ...+.....+-. +.... ++..+++.+..|..+...+..
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~-----~~~v~-~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVK-----VLSVK-ENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEE-----EEECT-TCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEE-----EEEEC-CCCeEEEEECCCceEEEEHHH
Confidence 777888888888887643111 111211222222 22222 345677778888888877643
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=75.03 E-value=2.8 Score=36.97 Aligned_cols=37 Identities=5% Similarity=0.109 Sum_probs=29.1
Q ss_pred CeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceee
Q psy11351 38 PVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATEL 75 (224)
Q Consensus 38 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 75 (224)
.+.+++..++. .++++-+.|+++|+|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCCCeEEee
Confidence 34455556665 79999999999999999999876654
No 362
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=74.63 E-value=24 Score=26.22 Aligned_cols=184 Identities=10% Similarity=0.059 Sum_probs=96.5
Q ss_pred cceEEEEEeCCCcEEEEeCCCCc-------eee--EEeccCCeeEEEEcCCCCcEEEEecCCCEEEEE---ecCC-----
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGD-------PID--FYLHERPVYGLSVDPSQDAIFASACDDGRVLLF---DTRS----- 68 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~-------~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iw---d~~~----- 68 (224)
+...+++.+.+|.|+--.+.+.+ -+. .+.....+..+...... ..++.-+..|.++-. ++..
T Consensus 2 ~E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~-d~ll~fT~~Gr~y~~~~~~lp~~~r~~ 80 (327)
T 3uc1_A 2 AEDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTH-DLILFFTTQGRVYRAKAYDLPEASRTA 80 (327)
T ss_dssp CCEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETT-SEEEEEETTSEEEEEEGGGSCBCCSSS
T ss_pred CccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCC-CEEEEEeCCCeEEEEEHHHCcCCCccC
Confidence 44678889999999876643211 111 11233444444443333 344444445666544 3332
Q ss_pred -cccce---eeccCCcCeEEE-EEcCC-CCCeEEEecCCCcEEEEecCCCce-------eeEeecCCCceeEEEEcCCCC
Q psy11351 69 -REEAT---ELAVNSGPFHAV-MFNPV-EARLVATANSKDGIALYDTRKPKE-------VLMQYGSCESCMSIRFNKAGT 135 (224)
Q Consensus 69 -~~~~~---~~~~~~~~i~~~-~~~~~-~~~~l~~~~~dg~v~i~d~~~~~~-------~~~~~~~~~~v~~~~~~~~~~ 135 (224)
|.++. .+.. ...|..+ ...+. +...++..+.+|.++.-.+..... ...+. ..+.+..+.......
T Consensus 81 ~G~~i~~~l~l~~-~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lk-e~D~lv~~~~~~~~d 158 (327)
T 3uc1_A 81 RGQHVANLLAFQP-EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLR-DNDELVGAVLCSAGD 158 (327)
T ss_dssp CCEEHHHHTTCCT-TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCC-TTCCEEEEEEECTTC
T ss_pred CCEEHHHccCCCC-CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEEC-CCCEEEEEEEecCCC
Confidence 22221 1222 3345554 33321 367889999999999887654221 11122 345555555555566
Q ss_pred eEeeeecCCCcEEEECC--CCCcc---------eecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeC
Q psy11351 136 QLLGLRRRLPPVLYNTR--SSSPV---------AQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRV 198 (224)
Q Consensus 136 ~l~~~~~d~~v~v~d~~--~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~ 198 (224)
.++..+..|.+..+... .-... ..+.....+.. +...+ .+.+++..+..|.++.-.+
T Consensus 159 ~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~-----~~~~~-~~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 159 DLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLS-----LNVVR-EGTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp EEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEE-----EEECC-TTCEEEEEETTSEEEEEEG
T ss_pred EEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEE-----EEEEC-CCCEEEEEeCCCcEEEEEH
Confidence 77778888888877766 21111 11112222222 22222 3557777888888887664
No 363
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=74.13 E-value=22 Score=25.61 Aligned_cols=114 Identities=11% Similarity=0.070 Sum_probs=69.3
Q ss_pred ccCCeeEEEEcCC-CCcEEEEecCCCEEEEEecCCcc------cceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEE
Q psy11351 35 HERPVYGLSVDPS-QDAIFASACDDGRVLLFDTRSRE------EATELAVNSGPFHAVMFNPVEARLVATANSKDGIALY 107 (224)
Q Consensus 35 ~~~~v~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~ 107 (224)
....|..+-. ++ .+..++..+.+|.++-..+..-. ....++. .+.+..+.... +...++..+..|.+..+
T Consensus 66 ~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~-~~~~ill~T~~G~~~r~ 142 (276)
T 3no0_A 66 REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSV-DETHILLFTKKGRVARF 142 (276)
T ss_dssp TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECC-SSCEEEEEETTSEEEEE
T ss_pred CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeC-CCCEEEEEECCCEEEEE
Confidence 3455666544 32 23688889999999998865432 1122333 34555555555 45567777788988877
Q ss_pred ecCCC---------ceeeEeecCCCceeEEEEcCCCCeEeeeecCCCcEEEECC
Q psy11351 108 DTRKP---------KEVLMQYGSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTR 152 (224)
Q Consensus 108 d~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~ 152 (224)
....- .....+ ...+.|..+...+++..++..+..|.++...+.
T Consensus 143 ~~~eip~~gR~a~Gv~~i~L-~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 143 SVREVPPSTPGARGVQGIKL-EKNDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp EGGGSCBCCTTCCCEECCCC-CTTCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred EhhhCCCcCCCCCCEEEEcc-CCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 65321 111111 234566666555566788888899988888764
No 364
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=73.80 E-value=27 Score=26.58 Aligned_cols=135 Identities=11% Similarity=0.217 Sum_probs=78.7
Q ss_pred cEEEEeCCCC--ceeeEEe-------ccCCeeEEEEc---CC----CCcEEEEecCCCEEEEEecCCcccceeec-----
Q psy11351 18 HVISHDMASG--DPIDFYL-------HERPVYGLSVD---PS----QDAIFASACDDGRVLLFDTRSREEATELA----- 76 (224)
Q Consensus 18 ~i~iwd~~~~--~~~~~~~-------~~~~v~~~~~~---~~----~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----- 76 (224)
+|.+||+.+. +.++.+. ....+..+.+. |. +....++=+..+-|.++|+.+++..+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6889999999 8887762 23467888887 22 21233444457889999999876433221
Q ss_pred ---------cC----CcCeEEEEEcCCC---CCeEEEecCCCcEEEEecC-----CCc--eeeEeecCC---CceeEEEE
Q psy11351 77 ---------VN----SGPFHAVMFNPVE---ARLVATANSKDGIALYDTR-----KPK--EVLMQYGSC---ESCMSIRF 130 (224)
Q Consensus 77 ---------~~----~~~i~~~~~~~~~---~~~l~~~~~dg~v~i~d~~-----~~~--~~~~~~~~~---~~v~~~~~ 130 (224)
+. ...+..|+++|.. ++.|.-..-.+ -++|.+. ... ......+.. ..-..+++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 10 1368888998831 44454443322 1333322 211 111122222 33345677
Q ss_pred c-CCCCeEeeeecCCCcEEEECCC
Q psy11351 131 N-KAGTQLLGLRRRLPPVLYNTRS 153 (224)
Q Consensus 131 ~-~~~~~l~~~~~d~~v~v~d~~~ 153 (224)
+ .+|..+++--..+.|..|+..+
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTS
T ss_pred eCCCCeEEEEeccCCeEEEEeCCC
Confidence 5 5677777777778899999875
No 365
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=73.70 E-value=31 Score=27.07 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=52.8
Q ss_pred CCCCCcce-EEEEEeCCCcEEEEeCCCCc---eeeE----Ee------ccCCeeEEEEcCC----CCcEEEEecC--C--
Q psy11351 1 MASGDPIK-VLRVIGNDDHVISHDMASGD---PIDF----YL------HERPVYGLSVDPS----QDAIFASACD--D-- 58 (224)
Q Consensus 1 ~a~~~~~~-~l~~~~~dg~i~iwd~~~~~---~~~~----~~------~~~~v~~~~~~~~----~~~~l~s~~~--d-- 58 (224)
||+..++. .++.+...|.|++++..... .+.- +. .......|+|+|+ + .+.++-+. +
T Consensus 19 ~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~-~lYv~yt~~~~~~ 97 (463)
T 2wg3_C 19 ALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG-KLYVSYTTNQERW 97 (463)
T ss_dssp EECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC-EEEEEEEECCCSS
T ss_pred EEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCC-EEEEEEeCCCCCc
Confidence 45566664 45555678999999764321 1111 11 1457889999996 3 34443221 1
Q ss_pred --------CEEEEEecCCc----------ccceeec--cCCcCeEEEEEcCCCCCeEEEecCC
Q psy11351 59 --------GRVLLFDTRSR----------EEATELA--VNSGPFHAVMFNPVEARLVATANSK 101 (224)
Q Consensus 59 --------~~i~iwd~~~~----------~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~~d 101 (224)
..|.-|.+..+ +.+..+. .....-..|.|.| ++.++++.+..
T Consensus 98 ~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~ 159 (463)
T 2wg3_C 98 AIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDG 159 (463)
T ss_dssp CSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCT
T ss_pred ccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCC
Confidence 13444555321 1111221 1123468999999 77766665443
No 366
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=73.41 E-value=25 Score=26.04 Aligned_cols=144 Identities=10% Similarity=0.039 Sum_probs=81.9
Q ss_pred cceEEEEEeCCCcEEEEeCCCCce-----ee--EEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecC--Ccc------
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGDP-----ID--FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTR--SRE------ 70 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~~-----~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~------ 70 (224)
+..+++..+.+|.++--.+..... +. .+.-...+..+...... ..++..+..|.+..+... .-.
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~-d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAG-DDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTT-CEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCC-CEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 456899999999999888654221 11 11224455555444444 456666778888777665 211
Q ss_pred ---cceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCc-------eeeE--eecCCCceeEEEEcCCCCeEe
Q psy11351 71 ---EATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPK-------EVLM--QYGSCESCMSIRFNKAGTQLL 138 (224)
Q Consensus 71 ---~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~-------~~~~--~~~~~~~v~~~~~~~~~~~l~ 138 (224)
....+.. ...|.++...+ .+..++..+..|.++.-.+.... -... +....+.+-.+....+...++
T Consensus 187 ~Gv~~i~L~~-~d~Vv~~~~~~-~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~ 264 (327)
T 3uc1_A 187 SGVQGMRFNI-DDRLLSLNVVR-EGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELY 264 (327)
T ss_dssp BCEESSCCCT-TCCEEEEEECC-TTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEE
T ss_pred CCeeeecCCC-CCEEEEEEEEC-CCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEE
Confidence 1122322 34566666655 55678888899998887754321 1111 112234454444444445666
Q ss_pred eeecCCCcEEEECC
Q psy11351 139 GLRRRLPPVLYNTR 152 (224)
Q Consensus 139 ~~~~d~~v~v~d~~ 152 (224)
..+.+|.+.-++..
T Consensus 265 l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 265 AVTSGGGVIRTAAR 278 (327)
T ss_dssp EEEGGGCEEEEEGG
T ss_pred EEcCCCeEEEEehh
Confidence 66777777777654
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=73.14 E-value=28 Score=28.29 Aligned_cols=60 Identities=13% Similarity=0.079 Sum_probs=40.4
Q ss_pred CeEEEEEcCCCCCeEEEecC------------CCcEEEEecCCCceeeEeec-CCCceeEEEEcCCCCeEeeee
Q psy11351 81 PFHAVMFNPVEARLVATANS------------KDGIALYDTRKPKEVLMQYG-SCESCMSIRFNKAGTQLLGLR 141 (224)
Q Consensus 81 ~i~~~~~~~~~~~~l~~~~~------------dg~v~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 141 (224)
.-..|.|++ ++.+.+.... ...+..++..+++....+.. ....++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 456889999 7777773321 12566677766654433333 346789999999999888764
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=70.44 E-value=7 Score=32.54 Aligned_cols=36 Identities=6% Similarity=0.015 Sum_probs=27.9
Q ss_pred CeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeec
Q psy11351 38 PVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELA 76 (224)
Q Consensus 38 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 76 (224)
.|.++.+. . .++++-+.|.++|+|++++++++....
T Consensus 223 ~Is~~~~~--~-~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLFH--E-RYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEET--T-TEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEeccC--C-cEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 45555553 3 699999999999999999998765543
No 369
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=67.96 E-value=5.9 Score=32.97 Aligned_cols=27 Identities=26% Similarity=0.241 Sum_probs=24.0
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceeeEE
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPIDFY 33 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~~~ 33 (224)
..++++-+.|+++|+||+.+++++...
T Consensus 231 ~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 231 ERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp TTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred CcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 468999999999999999999887766
No 370
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=67.72 E-value=27 Score=28.38 Aligned_cols=58 Identities=16% Similarity=0.222 Sum_probs=37.2
Q ss_pred eeEEEEcCCCCcEEEEecCC------------CEEEEEecCCcccceeeccC-CcCeEEEEEcCCCCCeEEEe
Q psy11351 39 VYGLSVDPSQDAIFASACDD------------GRVLLFDTRSREEATELAVN-SGPFHAVMFNPVEARLVATA 98 (224)
Q Consensus 39 v~~~~~~~~~~~~l~s~~~d------------~~i~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~ 98 (224)
.--|+|+|.| .+++.-..+ ..+.+.+..+++..+.+... ..+++.++|+| +++.|+..
T Consensus 478 PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp-Dg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp EEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEEE
T ss_pred CcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC-CCCEEEEE
Confidence 4568899998 666654322 24555666666655444433 45899999999 66666554
No 371
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=58.11 E-value=83 Score=26.42 Aligned_cols=64 Identities=14% Similarity=0.160 Sum_probs=38.2
Q ss_pred eccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeecc------------CCcCeEEEEEcCCCCCeEEEe
Q psy11351 34 LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAV------------NSGPFHAVMFNPVEARLVATA 98 (224)
Q Consensus 34 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~------------~~~~i~~~~~~~~~~~~l~~~ 98 (224)
+-.+.|.++.++|.++..+..+...+.|...+ ..++.-..+.. ....+.+++++|.+...++.+
T Consensus 18 g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~ 93 (763)
T 3a0f_A 18 SGGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLA 93 (763)
T ss_dssp CBCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEE
T ss_pred cCCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEE
Confidence 45678999999998877777777666554332 12221111111 124589999998554554443
No 372
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=57.59 E-value=76 Score=25.83 Aligned_cols=60 Identities=13% Similarity=0.205 Sum_probs=38.8
Q ss_pred CCeeEEEEcCCCCcEEEEecC------------CCEEEEEecCCcccceeeccC-CcCeEEEEEcCCCCCeEEEe
Q psy11351 37 RPVYGLSVDPSQDAIFASACD------------DGRVLLFDTRSREEATELAVN-SGPFHAVMFNPVEARLVATA 98 (224)
Q Consensus 37 ~~v~~~~~~~~~~~~l~s~~~------------d~~i~iwd~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~ 98 (224)
.....|.|.++| .+.++... ...+..++..+++....+... ..+++.++|+| +++.|+.+
T Consensus 476 nsPDnL~fd~~G-~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSP-D~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTC-CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEEE
T ss_pred CCCCceEECCCC-CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECC-CCCEEEEE
Confidence 346689999998 66663221 225666777677754444432 35689999999 66666554
No 373
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=57.22 E-value=51 Score=23.68 Aligned_cols=143 Identities=13% Similarity=0.078 Sum_probs=80.5
Q ss_pred cceEEEEEeCCCcEEEEeCCCCc------eeeEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCc---------c
Q psy11351 6 PIKVLRVIGNDDHVISHDMASGD------PIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR---------E 70 (224)
Q Consensus 6 ~~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---------~ 70 (224)
+..+++..+.+|.++-..+..-. ....+.-.+.+..+...... ..++..+..|.+..++...- .
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~-~~ill~T~~G~~~r~~~~eip~~gR~a~Gv 157 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDE-THILLFTKKGRVARFSVREVPPSTPGARGV 157 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSS-CEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCC-CEEEEEECCCEEEEEEhhhCCCcCCCCCCE
Confidence 34688899999999998875432 11112234555555555444 56777777888887765321 1
Q ss_pred cceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCC-------ceeeEeecCCCceeEEEEcCCCCeEeeeecC
Q psy11351 71 EATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKP-------KEVLMQYGSCESCMSIRFNKAGTQLLGLRRR 143 (224)
Q Consensus 71 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 143 (224)
....+.. ...|..+...+ ++..++..+..|.++...+... +-...+ ...+.+..+........++..+.+
T Consensus 158 ~~i~L~~-~d~vv~~~~~~-~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~ 234 (276)
T 3no0_A 158 QGIKLEK-NDETSGLRIWN-GEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKN 234 (276)
T ss_dssp ECCCCCT-TCCEEEEEEES-SCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETT
T ss_pred EEEccCC-CCEEEEEEEeC-CCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCC
Confidence 1122333 24566655545 4567778888999888876432 112222 233444444333333455556667
Q ss_pred CCcEE--EECC
Q psy11351 144 LPPVL--YNTR 152 (224)
Q Consensus 144 ~~v~v--~d~~ 152 (224)
|.+.. ++..
T Consensus 235 G~~ir~~~~~~ 245 (276)
T 3no0_A 235 GKAFYDKINQK 245 (276)
T ss_dssp SCEEEEEEEGG
T ss_pred CeEEEeeeCHH
Confidence 76666 6653
No 374
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=46.82 E-value=82 Score=22.99 Aligned_cols=183 Identities=10% Similarity=0.026 Sum_probs=92.4
Q ss_pred ceEEEEEeCCCcEEEEeCCCCceee---------EEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEec---CC------
Q psy11351 7 IKVLRVIGNDDHVISHDMASGDPID---------FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDT---RS------ 68 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~~~~---------~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~---~~------ 68 (224)
..++++.+.+|.|+--.+...+..+ .+.-...+..+...... ..++..+..|.++-... ..
T Consensus 3 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~-~~ll~fT~~G~~~~~~~~elp~~~~~a~ 81 (307)
T 1zi0_A 3 EDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTH-DHILCFSSRGRVYSMKVYQLPEATRGAR 81 (307)
T ss_dssp CEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETT-CEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred CcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCC-CEEEEEECCCEEEEEEhhHCcCCCCCCC
Confidence 4578899999999887765432211 11122334333333333 34555555677655543 22
Q ss_pred cccce---eeccCCcCeEEEEEcC--CCCCeEEEecCCCcEEEEecCCCc-------eeeEeecCCCceeEEEEcCCCCe
Q psy11351 69 REEAT---ELAVNSGPFHAVMFNP--VEARLVATANSKDGIALYDTRKPK-------EVLMQYGSCESCMSIRFNKAGTQ 136 (224)
Q Consensus 69 ~~~~~---~~~~~~~~i~~~~~~~--~~~~~l~~~~~dg~v~i~d~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~ 136 (224)
|.++. .+.. ...|..+..-+ .+..+++..+.+|.++.-.+.... ....+... +.+-.+........
T Consensus 82 G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 82 GRPIVNLLPLEQ-DERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDE 159 (307)
T ss_dssp CEEGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCE
T ss_pred CeEhhhccCCCC-CCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCE
Confidence 22221 2222 33455554321 145567888899999988764211 11112223 55555555555556
Q ss_pred EeeeecCCCcEEEECCCCCc---------ceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeC
Q psy11351 137 LLGLRRRLPPVLYNTRSSSP---------VAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRV 198 (224)
Q Consensus 137 l~~~~~d~~v~v~d~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~ 198 (224)
++..+.+|.+..++...-.. ...+.....+-.+ .... ++..++..+..|..+-.++
T Consensus 160 i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~-----~~~~-~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSL-----IVPR-GDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEE-----ECCC-SSCEEEEEETTSEEEEECG
T ss_pred EEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEE-----EEec-CCCEEEEEEcCCceEEEEH
Confidence 77777888777776542111 1112222233222 1112 3456777788888887766
No 375
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=46.70 E-value=1.1e+02 Score=25.30 Aligned_cols=55 Identities=9% Similarity=0.149 Sum_probs=36.1
Q ss_pred eEEEEEeCCCcEE-EEeCCCCc-------eee---EEeccCCeeEEEEcCCCCcEEEEecCCCEEEE
Q psy11351 8 KVLRVIGNDDHVI-SHDMASGD-------PID---FYLHERPVYGLSVDPSQDAIFASACDDGRVLL 63 (224)
Q Consensus 8 ~~l~~~~~dg~i~-iwd~~~~~-------~~~---~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~i 63 (224)
..+..|..+|.|. +.....+. .+. .+....+|..+.++++. ..|..++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~-~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQ-QQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTT-TEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCC-CEEEEEECCEEEEE
Confidence 4677888999874 44332221 111 12456789999999987 78888888876664
No 376
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=44.58 E-value=64 Score=25.58 Aligned_cols=67 Identities=7% Similarity=-0.029 Sum_probs=40.2
Q ss_pred CeEEEEEcCC-----CCCeEEEecCCCcEEEEecC-CCc-------eeeEee--cCCCceeEEEEcCCCCeEeeeecCCC
Q psy11351 81 PFHAVMFNPV-----EARLVATANSKDGIALYDTR-KPK-------EVLMQY--GSCESCMSIRFNKAGTQLLGLRRRLP 145 (224)
Q Consensus 81 ~i~~~~~~~~-----~~~~l~~~~~dg~v~i~d~~-~~~-------~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~ 145 (224)
..++|+.... +-..+..|+.+|.|+-.-+. ... .+..+. ....+|..|.++++..+|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 3566655431 23467778888887544332 211 111121 24578999999999999999987764
Q ss_pred cE
Q psy11351 146 PV 147 (224)
Q Consensus 146 v~ 147 (224)
++
T Consensus 485 ~~ 486 (495)
T 1q47_A 485 AQ 486 (495)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 377
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=44.18 E-value=83 Score=22.29 Aligned_cols=144 Identities=7% Similarity=0.009 Sum_probs=72.4
Q ss_pred cEEEEecCCCEEEEEecCCccc-ceeeccCCcCeEEEEEcCCCCCeEEEecCCCcEEEE---ecCCC----ceeeEe--e
Q psy11351 50 AIFASACDDGRVLLFDTRSREE-ATELAVNSGPFHAVMFNPVEARLVATANSKDGIALY---DTRKP----KEVLMQ--Y 119 (224)
Q Consensus 50 ~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~---d~~~~----~~~~~~--~ 119 (224)
..+++.+.+|.|+--....... ...++... .+..+.... ....++..+..|.++-+ ++... ..+... .
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lke~D-~l~~~~~~~-t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L 80 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYKAGD-SFKAAVKGK-SNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTL 80 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCCTTC-CEEEEEEEE-TTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCCCCC-EEEEEEEeC-CCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecC
Confidence 4566677888887655433211 11233333 343433333 33344445577776554 44221 111111 1
Q ss_pred cCCCceeEEEEcCCCCeEeeeecCCCcEEEECCC-------CCcceecccCCcccceeeeEEEEeCCCCeEEEEcCCCCe
Q psy11351 120 GSCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRS-------SSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFV 192 (224)
Q Consensus 120 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~v~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 192 (224)
.....|..+....++.+++..+..|.++...+.. +.....+...+.+-. +...+.+++.++..+.+|.
T Consensus 81 ~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~-----~~~~~~~~~~i~l~T~~G~ 155 (256)
T 1zvt_A 81 PPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMP-----PVVIEDASDMLLAITQAGR 155 (256)
T ss_dssp CTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCC-----CEECCCTTCEEEEEETTSE
T ss_pred CCCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEE-----EEEecCCCCEEEEEcCCCe
Confidence 2345666664434566788889999988887632 222222222222222 1122113456667778888
Q ss_pred EEEEeCCC
Q psy11351 193 LYMWRVPR 200 (224)
Q Consensus 193 v~iw~~~~ 200 (224)
+..+....
T Consensus 156 ~lrf~~~e 163 (256)
T 1zvt_A 156 MLMFPVSD 163 (256)
T ss_dssp EEEEEGGG
T ss_pred EEEEEHHH
Confidence 88887643
No 378
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=42.36 E-value=1.2e+02 Score=24.06 Aligned_cols=56 Identities=9% Similarity=0.087 Sum_probs=36.0
Q ss_pred ceEEEEEeCCCcEE-EEeCCCCc-------eeeEE---eccCCeeEEEEcCCCCcEEEEecCCCEEEE
Q psy11351 7 IKVLRVIGNDDHVI-SHDMASGD-------PIDFY---LHERPVYGLSVDPSQDAIFASACDDGRVLL 63 (224)
Q Consensus 7 ~~~l~~~~~dg~i~-iwd~~~~~-------~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~i 63 (224)
-..+..|..+|.|. +.....+. .+..+ ....+|..+.++++. ..|..++.++.++|
T Consensus 421 ~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~-~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 421 YDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQ-QQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTT-TEEEEEBSSCEEEE
T ss_pred EEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCC-CEEEEEECCeEEEE
Confidence 34677889999874 33332221 12222 346789999999987 78888888776654
No 379
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=39.71 E-value=99 Score=25.21 Aligned_cols=55 Identities=7% Similarity=0.024 Sum_probs=36.2
Q ss_pred eEEEEEeCCCcEE-EEeCCCCc---ee--eEE---eccCCeeEEEEcCCCCcEEEEecCCCEEEE
Q psy11351 8 KVLRVIGNDDHVI-SHDMASGD---PI--DFY---LHERPVYGLSVDPSQDAIFASACDDGRVLL 63 (224)
Q Consensus 8 ~~l~~~~~dg~i~-iwd~~~~~---~~--~~~---~~~~~v~~~~~~~~~~~~l~s~~~d~~i~i 63 (224)
..+..|+.+|.|. +.....+. .. ..+ ....+|..+.++++. ..|..++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~-~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAER-RKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTT-TEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCC-CEEEEEecceEEEc
Confidence 5677888999875 33333221 11 112 346789999999987 68888887766665
No 380
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=38.04 E-value=90 Score=25.44 Aligned_cols=53 Identities=4% Similarity=-0.021 Sum_probs=33.1
Q ss_pred CeEEEecCCCcEEEEecCCCc-----e-eeEee--cCCCceeEEEEcCCCCeEeeeecCCC
Q psy11351 93 RLVATANSKDGIALYDTRKPK-----E-VLMQY--GSCESCMSIRFNKAGTQLLGLRRRLP 145 (224)
Q Consensus 93 ~~l~~~~~dg~v~i~d~~~~~-----~-~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~ 145 (224)
..+..|+.+|.|+-.-+.... . +..+. ....+|..+.++++...|++++.++.
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V 441 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEV 441 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceE
Confidence 466778888887644332211 1 11121 34568899999999888888766543
No 381
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=34.68 E-value=2e+02 Score=23.98 Aligned_cols=104 Identities=11% Similarity=0.025 Sum_probs=55.3
Q ss_pred CCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcccceeeccC-------CcCeEEEEEcCCCCCeEEEecCC-------C
Q psy11351 37 RPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVN-------SGPFHAVMFNPVEARLVATANSK-------D 102 (224)
Q Consensus 37 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~l~~~~~d-------g 102 (224)
+.|..++++|.++..+..+...+.|...+- .++.-..+..+ ...|.+++++|.+...++.+... +
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Confidence 389999999987667777776666554442 22221222111 24699999998555555444321 1
Q ss_pred cEEEEecCCC-ceeeEee-cC--------CCceeEEEEcCC-CCeEeeee
Q psy11351 103 GIALYDTRKP-KEVLMQY-GS--------CESCMSIRFNKA-GTQLLGLR 141 (224)
Q Consensus 103 ~v~i~d~~~~-~~~~~~~-~~--------~~~v~~~~~~~~-~~~l~~~~ 141 (224)
...||....+ +.-.... .. ...+..++++|. .+.++.+.
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 2445544332 2111111 11 112467899886 35566655
No 382
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=30.82 E-value=1.3e+02 Score=24.90 Aligned_cols=53 Identities=6% Similarity=-0.033 Sum_probs=33.5
Q ss_pred CeEEEecCCCcEE-EEecCCCc-------eee--EeecCCCceeEEEEcCCCCeEeeeecCCC
Q psy11351 93 RLVATANSKDGIA-LYDTRKPK-------EVL--MQYGSCESCMSIRFNKAGTQLLGLRRRLP 145 (224)
Q Consensus 93 ~~l~~~~~dg~v~-i~d~~~~~-------~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 145 (224)
..+..|+.+|.|+ +.-..... .+. .......+|..|.++++.++|++++.++.
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V 492 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 492 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEE
Confidence 4567788888864 33222111 111 11235678999999999999999887663
No 383
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=28.99 E-value=57 Score=21.95 Aligned_cols=35 Identities=23% Similarity=0.406 Sum_probs=25.4
Q ss_pred cCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCcc
Q psy11351 36 ERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSRE 70 (224)
Q Consensus 36 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 70 (224)
...+.++.|...+...+++.+.++++.++|.+-|+
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 34456667766544567777788999999998776
No 384
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=28.06 E-value=2.4e+02 Score=23.37 Aligned_cols=52 Identities=2% Similarity=0.054 Sum_probs=33.2
Q ss_pred CeEEEecCCCcEEEE-ecCCCceee-Ee--ecCCCceeEEEEcCCC--CeEeeeecCC
Q psy11351 93 RLVATANSKDGIALY-DTRKPKEVL-MQ--YGSCESCMSIRFNKAG--TQLLGLRRRL 144 (224)
Q Consensus 93 ~~l~~~~~dg~v~i~-d~~~~~~~~-~~--~~~~~~v~~~~~~~~~--~~l~~~~~d~ 144 (224)
..+..|+.+|.|+-. ......... .+ .....+|..|.++++. .+|++++.++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~ 473 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSG 473 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSC
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCe
Confidence 467788889887443 333322211 11 2345788899999987 8888877665
No 385
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=27.26 E-value=1.9e+02 Score=21.32 Aligned_cols=186 Identities=9% Similarity=0.062 Sum_probs=94.4
Q ss_pred ceEEEEEeCCCcEEEEeCCCCc---ee-eEEeccCCeeEEEEcCCCCcEEEEecCCCEEEEEec---CC------cccce
Q psy11351 7 IKVLRVIGNDDHVISHDMASGD---PI-DFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDT---RS------REEAT 73 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~---~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~---~~------~~~~~ 73 (224)
..++++.+.+|.|+--.+...+ .. ..+.-...+..+...... ..++..+..|.+.-... .. |.++.
T Consensus 5 e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~-d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~ 83 (323)
T 1wp5_A 5 EDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTK-DVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIA 83 (323)
T ss_dssp CEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETT-SEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGG
T ss_pred CcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCC-CEEEEEECCCEEEEEEHHHCcCCCCCCCCcChh
Confidence 4578899999999877654211 10 111223334343333333 34555555677655543 22 22221
Q ss_pred e---eccCCcCeEEE-EEcCC-CCCeEEEecCCCcEEEEecCCCce------e--eEeecCCCceeEEEEcCCCCeEeee
Q psy11351 74 E---LAVNSGPFHAV-MFNPV-EARLVATANSKDGIALYDTRKPKE------V--LMQYGSCESCMSIRFNKAGTQLLGL 140 (224)
Q Consensus 74 ~---~~~~~~~i~~~-~~~~~-~~~~l~~~~~dg~v~i~d~~~~~~------~--~~~~~~~~~v~~~~~~~~~~~l~~~ 140 (224)
. +.. ...|..+ ...+. ++.+++..+.+|.++.-.+..... . ..+. ..+.+-.+........++..
T Consensus 84 ~~i~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~-e~d~lv~~~~~~~~~~i~l~ 161 (323)
T 1wp5_A 84 NIIPIDR-DEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLK-NDDQVVDVHLTDGMNELFLV 161 (323)
T ss_dssp GTSCCCT-TCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCC-TTCCEEEEEEECSCSEEEEE
T ss_pred hccCCCC-CCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeC-CCCEEEEEEEeCCCCEEEEE
Confidence 1 222 2345554 33321 245788889999999887642211 1 1122 23555555555555677778
Q ss_pred ecCCCcEEEECCCCCc-------cee--cccCCcccceeeeEEEEeCCCCeEEEEcCCCCeEEEEeCCC
Q psy11351 141 RRRLPPVLYNTRSSSP-------VAQ--FDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWRVPR 200 (224)
Q Consensus 141 ~~d~~v~v~d~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~v~iw~~~~ 200 (224)
+.+|.+..+....-.. +.. +.....+-.+ ...+.+...++..+..|..+..++..
T Consensus 162 T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~-----~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 162 THNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSG-----QLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp ETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEE-----EEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred eCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEE-----EEEcCCCcEEEEEECCCceEEEEHHH
Confidence 8888887777643111 111 1122223222 12222332677777788877766543
No 386
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=26.75 E-value=87 Score=25.17 Aligned_cols=63 Identities=11% Similarity=0.107 Sum_probs=37.8
Q ss_pred eEEEEEcCC-CCCeEEEecCCCcEEEEecCCCc----eeeEe--ecCCCcee-EEEEcCCCCeEeeeecCC
Q psy11351 82 FHAVMFNPV-EARLVATANSKDGIALYDTRKPK----EVLMQ--YGSCESCM-SIRFNKAGTQLLGLRRRL 144 (224)
Q Consensus 82 i~~~~~~~~-~~~~l~~~~~dg~v~i~d~~~~~----~~~~~--~~~~~~v~-~~~~~~~~~~l~~~~~d~ 144 (224)
.++++.... +-..+..|+.+|.|+-.-+.... ....+ .....+|. .|.+++++.+|++++.++
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~ 472 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQ 472 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEeccc
Confidence 444444331 23466778889987655443221 11111 12356775 899999999999988765
No 387
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=24.43 E-value=2.3e+02 Score=21.28 Aligned_cols=139 Identities=9% Similarity=0.083 Sum_probs=73.7
Q ss_pred EEEEeCCCcEEEEeCCCC--------ceee---EEe--ccCCeeEEEEcCCCCcEEEEecCCCEEEEEecCCccc-----
Q psy11351 10 LRVIGNDDHVISHDMASG--------DPID---FYL--HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREE----- 71 (224)
Q Consensus 10 l~~~~~dg~i~iwd~~~~--------~~~~---~~~--~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----- 71 (224)
.+.-..||+|..|-.... +... ... ....+..++++.-. ...+.-..||.|..|-......
T Consensus 65 ~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~-~h~~al~~~G~v~~wG~n~~GqLG~g~ 143 (389)
T 3kci_A 65 LFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGG-KHCLALSSEGEVYSWGEAEDGKLGHGN 143 (389)
T ss_dssp EEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTC-SEEEEEETTSCEEEEECCGGGTTCSSS
T ss_pred EEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCC-CeEEEEcCCCCEEEEeCCCCCcCCCCC
Confidence 344467899999965421 1111 111 22334556665544 5666667799999996533111
Q ss_pred ------ceeecc-CCcCeEEEEEcCCCCCeEEEecCCCcEEEEecCCCc-----------eeeEeec-CCCceeEEEEcC
Q psy11351 72 ------ATELAV-NSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPK-----------EVLMQYG-SCESCMSIRFNK 132 (224)
Q Consensus 72 ------~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~-----------~~~~~~~-~~~~v~~~~~~~ 132 (224)
...+.. ....|..++. +....+.-..+|.|..|-..... .+..... ....|..++...
T Consensus 144 ~~~~~~p~~v~~l~~~~i~~va~---G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~ 220 (389)
T 3kci_A 144 RSPCDRPRVIESLRGIEVVDVAA---GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGS 220 (389)
T ss_dssp CCCEEEEEECGGGTTSCEEEEEE---CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECC
T ss_pred CccCcCCeEecccCCCeEEEEEe---CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcC
Confidence 111111 1225666654 44555566688999999653210 1111111 234566666544
Q ss_pred CCCeEeeeecCCCcEEEECC
Q psy11351 133 AGTQLLGLRRRLPPVLYNTR 152 (224)
Q Consensus 133 ~~~~l~~~~~d~~v~v~d~~ 152 (224)
...+.++-..++.|+.|-..
T Consensus 221 g~~~t~~l~~~G~v~~wG~n 240 (389)
T 3kci_A 221 GDAQTLCLTDDDTVWSWGDG 240 (389)
T ss_dssp SSCEEEEEETTTEEEEEECC
T ss_pred CCcEEEEEccCCEEEEEeCC
Confidence 33455556678888888543
No 388
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=23.19 E-value=1.8e+02 Score=23.39 Aligned_cols=56 Identities=7% Similarity=0.043 Sum_probs=35.1
Q ss_pred ceEEEEEeCCCcEEEEeCCCCc----eeeEE---eccCCee-EEEEcCCCCcEEEEecCCCEEEE
Q psy11351 7 IKVLRVIGNDDHVISHDMASGD----PIDFY---LHERPVY-GLSVDPSQDAIFASACDDGRVLL 63 (224)
Q Consensus 7 ~~~l~~~~~dg~i~iwd~~~~~----~~~~~---~~~~~v~-~~~~~~~~~~~l~s~~~d~~i~i 63 (224)
-..+..|..+|.|.=..+.... .+..+ ....+|. .+.+++++ ..|..++.++.++|
T Consensus 413 ~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~-~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 413 YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQ-LYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTS-SEEEEECSSEEEEE
T ss_pred eEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCC-CeEEEEecccccee
Confidence 3567788889987544443221 12222 2256785 89999987 78888887655554
No 389
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=20.49 E-value=1.5e+02 Score=23.85 Aligned_cols=55 Identities=5% Similarity=-0.052 Sum_probs=0.0
Q ss_pred eEEEecCCCcEEEEecCCCceeeEeec----CCCce-eEEEEcCCCCeEeeeecCCCcEE
Q psy11351 94 LVATANSKDGIALYDTRKPKEVLMQYG----SCESC-MSIRFNKAGTQLLGLRRRLPPVL 148 (224)
Q Consensus 94 ~l~~~~~dg~v~i~d~~~~~~~~~~~~----~~~~v-~~~~~~~~~~~l~~~~~d~~v~v 148 (224)
.+..|+.+|.|+-.-+........+.. ...+| ..+.++++..+|++++.++.+++
T Consensus 402 V~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 402 IAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Done!