Your job contains 1 sequence.
>psy11351
MASGDPIKVLRVIGNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGR
VLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG
SCESCMSIRFNKAGTQLLGLRRRLPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQ
DEYVVSGSDDFVLYMWRVPRDDIYVSSDIYVCRHGSLEVSILPA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11351
(224 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-060929-808 - symbol:dcaf5 "ddb1 and cul4 as... 572 1.8e-55 1
UNIPROTKB|F1N0J7 - symbol:DCAF5 "Uncharacterized protein"... 574 3.2e-55 1
UNIPROTKB|Q96JK2 - symbol:DCAF5 "DDB1- and CUL4-associate... 574 5.4e-55 1
UNIPROTKB|E2QXZ3 - symbol:DCAF5 "Uncharacterized protein"... 574 5.6e-55 1
UNIPROTKB|G3V6K4 - symbol:Dcaf5 "Protein Dcaf5" species:1... 572 9.2e-55 1
MGI|MGI:2444785 - symbol:Dcaf5 "DDB1 and CUL4 associated ... 571 1.2e-54 1
UNIPROTKB|F1NXD8 - symbol:DCAF5 "Uncharacterized protein"... 564 4.0e-54 1
DICTYBASE|DDB_G0269686 - symbol:DDB_G0269686 "WD40 repeat... 96 1.3e-06 3
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 123 2.5e-05 1
ASPGD|ASPL0000009210 - symbol:AN4226 species:162425 "Emer... 122 3.7e-05 1
POMBASE|SPBC1A4.07c - symbol:SPBC1A4.07c "U3 snoRNP-assoc... 121 4.6e-05 1
TAIR|locus:2132796 - symbol:AT4G35140 "AT4G35140" species... 89 6.0e-05 2
FB|FBgn0036500 - symbol:CG7275 species:7227 "Drosophila m... 120 6.4e-05 1
CGD|CAL0005164 - symbol:SOF1 species:5476 "Candida albica... 119 8.0e-05 1
UNIPROTKB|Q5A7Q9 - symbol:SOF1 "Putative uncharacterized ... 119 8.0e-05 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 116 9.5e-05 1
CGD|CAL0005992 - symbol:orf19.3581 species:5476 "Candida ... 118 0.00011 1
TAIR|locus:2121164 - symbol:AT4G38480 "AT4G38480" species... 88 0.00014 2
UNIPROTKB|Q2HJ56 - symbol:PWP1 "Periodic tryptophan prote... 117 0.00017 1
MGI|MGI:1917715 - symbol:Wdr77 "WD repeat domain 77" spec... 114 0.00021 1
RGD|1310362 - symbol:Wdtc1 "WD and tetratricopeptide repe... 81 0.00033 2
MGI|MGI:2685541 - symbol:Wdtc1 "WD and tetratricopeptide ... 81 0.00033 2
UNIPROTKB|Q13610 - symbol:PWP1 "Periodic tryptophan prote... 114 0.00039 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 111 0.00052 1
UNIPROTKB|F1NUL8 - symbol:WDR77 "Uncharacterized protein"... 110 0.00063 1
DICTYBASE|DDB_G0293070 - symbol:DDB_G0293070 "TROVE domai... 119 0.00066 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 111 0.00069 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 110 0.00070 1
UNIPROTKB|Q96EX3 - symbol:WDR34 "WD repeat-containing pro... 112 0.00074 1
SGD|S000003934 - symbol:SOF1 "Essential protein required ... 111 0.00084 1
>ZFIN|ZDB-GENE-060929-808 [details] [associations]
symbol:dcaf5 "ddb1 and cul4 associated factor 5"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-060929-808 Gene3D:2.130.10.10 SUPFAM:SSF50978
CTD:8816 KO:K11800 GeneTree:ENSGT00530000062951 EMBL:CR361558
EMBL:CABZ01003772 EMBL:CABZ01003773 EMBL:FP103009 EMBL:BC124494
IPI:IPI00503404 RefSeq:NP_001071020.1 UniGene:Dr.83785
Ensembl:ENSDART00000084867 GeneID:560257 KEGG:dre:560257
HOGENOM:HOG000205845 HOVERGEN:HBG095204 InParanoid:Q08BZ1
NextBio:20883350 Uniprot:Q08BZ1
Length = 789
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 106/193 (54%), Positives = 137/193 (70%)
Query: 14 GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73
GND+ VI HD+ G+ ++ +LH+ VYGLSV P D +FAS+ DDGRVL++DTR
Sbjct: 118 GNDEQVILHDVERGETLNVFLHDDAVYGLSVSPVNDNVFASSSDDGRVLIWDTREPPHGE 177
Query: 74 ELAVNSGP--FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG---SCESCMSI 128
+ + P FH+VMFNPVE RL+ATANSK+G+ L+D RKP+ L++YG S +S MS+
Sbjct: 178 PFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPRSSLLRYGGSLSLQSAMSV 237
Query: 129 RFNKAGTQXXXXXXXXPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS 188
RFN GTQ PPVLY S P QFD++GY+NSCTMKSCCFAG +D+Y++SGS
Sbjct: 238 RFNSTGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDRDQYILSGS 297
Query: 189 DDFVLYMWRVPRD 201
DDF LYMWR+P D
Sbjct: 298 DDFNLYMWRIPTD 310
>UNIPROTKB|F1N0J7 [details] [associations]
symbol:DCAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0080008
OMA:YIGEDNY GeneTree:ENSGT00530000062951 EMBL:DAAA02029489
IPI:IPI00687521 Ensembl:ENSBTAT00000028279 Uniprot:F1N0J7
Length = 876
Score = 574 (207.1 bits), Expect = 3.2e-55, P = 3.2e-55
Identities = 108/193 (55%), Positives = 137/193 (70%)
Query: 14 GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73
GND+ VI HD+ S + +D + HE VYGLSV P D IFAS+ DDGRVL++D R
Sbjct: 49 GNDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 108
Query: 74 ELAVNSGP--FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG---SCESCMSI 128
+ + P FH+VMFNPVE RL+ATANSK+G+ L+D RKP+ L++YG S +S MS+
Sbjct: 109 PFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSV 168
Query: 129 RFNKAGTQXXXXXXXXPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS 188
RFN GTQ PPVLY+ S PV QFD++GY+NSCTMKSCCFAG +D+Y++SGS
Sbjct: 169 RFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGS 228
Query: 189 DDFVLYMWRVPRD 201
DDF LYMWR+P D
Sbjct: 229 DDFNLYMWRIPAD 241
>UNIPROTKB|Q96JK2 [details] [associations]
symbol:DCAF5 "DDB1- and CUL4-associated factor 5"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA;IC]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005739 EMBL:CH471061 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567
GO:GO:0080008 EMBL:AB058727 EMBL:AL831932 EMBL:AL831823
EMBL:BC136632 EMBL:AF044774 IPI:IPI00382979 IPI:IPI00783277
RefSeq:NP_003852.1 UniGene:Hs.509780 PDB:3I89 PDBsum:3I89
ProteinModelPortal:Q96JK2 SMR:Q96JK2 DIP:DIP-48763N IntAct:Q96JK2
STRING:Q96JK2 PhosphoSite:Q96JK2 DMDM:47606200 PaxDb:Q96JK2
PRIDE:Q96JK2 Ensembl:ENST00000341516 Ensembl:ENST00000554215
Ensembl:ENST00000556847 GeneID:8816 KEGG:hsa:8816 UCSC:uc001xkp.3
CTD:8816 GeneCards:GC14M069517 HGNC:HGNC:20224 MIM:603812
neXtProt:NX_Q96JK2 PharmGKB:PA165478844 HOGENOM:HOG000060080
HOVERGEN:HBG057544 InParanoid:Q96JK2 KO:K11800 OMA:YIGEDNY
OrthoDB:EOG44MXRG ChiTaRS:DCAF5 EvolutionaryTrace:Q96JK2
GenomeRNAi:8816 NextBio:33070 ArrayExpress:Q96JK2 Bgee:Q96JK2
CleanEx:HS_WDR22 Genevestigator:Q96JK2 GermOnline:ENSG00000139990
Uniprot:Q96JK2
Length = 942
Score = 574 (207.1 bits), Expect = 5.4e-55, P = 5.4e-55
Identities = 108/193 (55%), Positives = 137/193 (70%)
Query: 14 GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73
GND+ VI HD+ S + +D + HE VYGLSV P D IFAS+ DDGRVL++D R
Sbjct: 120 GNDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 74 ELAVNSGP--FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG---SCESCMSI 128
+ + P FH+VMFNPVE RL+ATANSK+G+ L+D RKP+ L++YG S +S MS+
Sbjct: 180 PFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSV 239
Query: 129 RFNKAGTQXXXXXXXXPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS 188
RFN GTQ PPVLY+ S PV QFD++GY+NSCTMKSCCFAG +D+Y++SGS
Sbjct: 240 RFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGS 299
Query: 189 DDFVLYMWRVPRD 201
DDF LYMWR+P D
Sbjct: 300 DDFNLYMWRIPAD 312
>UNIPROTKB|E2QXZ3 [details] [associations]
symbol:DCAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0080008
CTD:8816 KO:K11800 OMA:YIGEDNY GeneTree:ENSGT00530000062951
EMBL:AAEX03005804 EMBL:AAEX03005805 EMBL:AAEX03005806
RefSeq:XP_547871.3 Ensembl:ENSCAFT00000026219 GeneID:490749
KEGG:cfa:490749 Uniprot:E2QXZ3
Length = 947
Score = 574 (207.1 bits), Expect = 5.6e-55, P = 5.6e-55
Identities = 108/193 (55%), Positives = 137/193 (70%)
Query: 14 GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73
GND+ VI HD+ S + +D + HE VYGLSV P D IFAS+ DDGRVL++D R
Sbjct: 120 GNDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 74 ELAVNSGP--FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG---SCESCMSI 128
+ + P FH+VMFNPVE RL+ATANSK+G+ L+D RKP+ L++YG S +S MS+
Sbjct: 180 PFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSV 239
Query: 129 RFNKAGTQXXXXXXXXPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS 188
RFN GTQ PPVLY+ S PV QFD++GY+NSCTMKSCCFAG +D+Y++SGS
Sbjct: 240 RFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGS 299
Query: 189 DDFVLYMWRVPRD 201
DDF LYMWR+P D
Sbjct: 300 DDFNLYMWRIPAD 312
>UNIPROTKB|G3V6K4 [details] [associations]
symbol:Dcaf5 "Protein Dcaf5" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1306535 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CH473947
CTD:8816 KO:K11800 OMA:YIGEDNY GeneTree:ENSGT00530000062951
RefSeq:NP_001094188.1 UniGene:Rn.47944 ProteinModelPortal:G3V6K4
Ensembl:ENSRNOT00000006005 GeneID:314273 KEGG:rno:314273
NextBio:667391 Uniprot:G3V6K4
Length = 946
Score = 572 (206.4 bits), Expect = 9.2e-55, P = 9.2e-55
Identities = 108/193 (55%), Positives = 137/193 (70%)
Query: 14 GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73
GND+ VI HD+ S + +D + HE VYGLSV P D IFAS+ DDGRVL++D R
Sbjct: 120 GNDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 74 ELAVNSGP--FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG---SCESCMSI 128
+ + P FH+VMFNPVE RL+ATANSK+G+ L+D RKP+ L++YG S +S MS+
Sbjct: 180 PFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSV 239
Query: 129 RFNKAGTQXXXXXXXXPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS 188
RFN GTQ PPVLY+ S PV QFD++GY+NSCTMKSCCFAG +D+Y++SGS
Sbjct: 240 RFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGS 299
Query: 189 DDFVLYMWRVPRD 201
DDF LYMW+VP D
Sbjct: 300 DDFNLYMWKVPAD 312
>MGI|MGI:2444785 [details] [associations]
symbol:Dcaf5 "DDB1 and CUL4 associated factor 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:2444785 GO:GO:0005739
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0016567 GO:GO:0080008 CTD:8816 HOGENOM:HOG000060080
HOVERGEN:HBG057544 KO:K11800 OMA:YIGEDNY OrthoDB:EOG44MXRG
EMBL:AK122561 EMBL:BC030857 EMBL:BC042567 EMBL:BC046813
EMBL:AK034653 EMBL:AK077889 IPI:IPI00340504 RefSeq:NP_796241.3
UniGene:Mm.220310 UniGene:Mm.447547 ProteinModelPortal:Q80T85
SMR:Q80T85 STRING:Q80T85 PhosphoSite:Q80T85 PaxDb:Q80T85
PRIDE:Q80T85 Ensembl:ENSMUST00000054145 GeneID:320808
KEGG:mmu:320808 GeneTree:ENSGT00530000062951 InParanoid:Q80T85
NextBio:397479 Bgee:Q80T85 CleanEx:MM_WDR22 Genevestigator:Q80T85
GermOnline:ENSMUSG00000049106 Uniprot:Q80T85
Length = 946
Score = 571 (206.1 bits), Expect = 1.2e-54, P = 1.2e-54
Identities = 107/193 (55%), Positives = 137/193 (70%)
Query: 14 GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73
GND+ VI HD+ S + +D + HE VYGLSV P D IFAS+ DDGRVL++D R
Sbjct: 120 GNDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGE 179
Query: 74 ELAVNSGP--FHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG---SCESCMSI 128
+ + P FH+VMFNPVE RL+ATANSK+G+ L+D RKP+ L++YG S +S MS+
Sbjct: 180 PFCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSV 239
Query: 129 RFNKAGTQXXXXXXXXPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS 188
RFN GTQ PPVLY+ S PV QFD++GY+NSCTMKSCCFAG +D+Y++SGS
Sbjct: 240 RFNSNGTQLLALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGS 299
Query: 189 DDFVLYMWRVPRD 201
DDF LYMW++P D
Sbjct: 300 DDFNLYMWKIPAD 312
>UNIPROTKB|F1NXD8 [details] [associations]
symbol:DCAF5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0080008
OMA:YIGEDNY GeneTree:ENSGT00530000062951 EMBL:AADN02003166
IPI:IPI00585055 Ensembl:ENSGALT00000015407 Uniprot:F1NXD8
Length = 871
Score = 564 (203.6 bits), Expect = 4.0e-54, P = 4.0e-54
Identities = 109/193 (56%), Positives = 137/193 (70%)
Query: 14 GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTR--SREE 71
GND+ VI HD+ S + +D + HE VYGLSV P D IFAS+ DDGRVL++D R S E
Sbjct: 49 GNDEQVILHDVESTETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESSHGE 108
Query: 72 ATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVLMQYG---SCESCMSI 128
LA FH+VMFNPVE RL+ATANSK+G+ L+D R+P+ L++YG S +S MS+
Sbjct: 109 PFCLAHYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRRPQSSLLRYGGNLSLQSAMSV 168
Query: 129 RFNKAGTQXXXXXXXXPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGS 188
RFN GTQ PPVLY+ PV QFD++GY+NSCTMKSCCFAG +D+Y++SGS
Sbjct: 169 RFNSNGTQLLALRRRLPPVLYDIHCRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGS 228
Query: 189 DDFVLYMWRVPRD 201
DDF LYMWR+P D
Sbjct: 229 DDFNLYMWRIPPD 241
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 96 (38.9 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 14 GNDDHVISHDMASGDPIDFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEAT 73
GND + +D+ + + H + V LSV P+Q +F S+ DG V LFD R + + T
Sbjct: 109 GNDADIRYYDIENQKCTVYKHHSKKVLKLSVCPTQPQVFLSSSSDGSVRLFDVRLKYKDT 168
Query: 74 ELA-VNSGP 81
E+ + + P
Sbjct: 169 EIQPIQTAP 177
Score = 87 (35.7 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 162 HEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMW 196
+ G+ + T+KS F G EY+VSGSDD L++W
Sbjct: 773 YSGHVSEQTIKSVNFYGPNSEYIVSGSDDSKLFIW 807
Score = 38 (18.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 84 AVMFNPVEARLVATANSKDGIALYDTR 110
+V ++P + TA+S + L+D R
Sbjct: 274 SVEYHPFDGYSFITASSDGTVRLFDQR 300
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARL 94
HE + +S + +F SA +DGR++++DTR+ + ++ V+ + + FNP +
Sbjct: 216 HESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWV 275
Query: 95 VATANSKDGIALYDTRK 111
+ATA+S +AL+D RK
Sbjct: 276 LATASSDSTVALFDLRK 292
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 122 (48.0 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 39/166 (23%), Positives = 75/166 (45%)
Query: 39 VYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATA 98
+ ++ + ++ ++ AS D ++L+D R+ ++L + +AV +NP+EA A A
Sbjct: 200 ITSVAFNQTETSVLASTGIDRSIILYDLRTSSPLSKLVLKLAS-NAVSWNPMEAFNFAVA 258
Query: 99 NSKDGIALYDTRKPKEVL-MQYGSCESCMSIRFNKAGTQXXXXXXXXPPVLYNTRSSSPV 157
N + ++D RK L + + M + F+ G + L+N R++
Sbjct: 259 NEDHNVYMFDMRKMNRALNVLKDHVAAVMDVDFSPTGEELVTASYDRTIRLWN-RATG-- 315
Query: 158 AQFDHEGYYNSCTMKSCCFAGTQD-EYVVSGSDDFVLYMWRVPRDD 202
+ Y+ + T D +YV+SGSDD + +WR D
Sbjct: 316 --HSRDIYHTQRMQRVFSAKFTPDNKYVLSGSDDGNIRLWRANASD 359
>POMBASE|SPBC1A4.07c [details] [associations]
symbol:SPBC1A4.07c "U3 snoRNP-associated protein Sof1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1A4.07c GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 PIR:T39855 RefSeq:NP_595809.1
ProteinModelPortal:O74340 STRING:O74340 EnsemblFungi:SPBC1A4.07c.1
GeneID:2540796 KEGG:spo:SPBC1A4.07c OrthoDB:EOG4GXJWG
NextBio:20801914 Uniprot:O74340
Length = 436
Score = 121 (47.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 36/153 (23%), Positives = 67/153 (43%)
Query: 47 SQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIAL 106
++ ++ ASA D ++++D R+ T+L + +++ +NP+EA + + +
Sbjct: 198 TETSVLASAGMDRSIVIYDLRTSSPLTKL-ITKLRTNSISWNPMEAFNFVAGSEDHNLYM 256
Query: 107 YDTRKPKEVLMQYGSCESC-MSIRFNKAGTQXXXXXXXXPPVLYNTRSSSPVAQFDHEGY 165
YD R K L Y S MS+ F+ G + +YN R + Y
Sbjct: 257 YDMRNLKRALHVYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRIYNVREGH-----SRDVY 311
Query: 166 YNSCTMKSCCFAGTQD-EYVVSGSDDFVLYMWR 197
+ + + D +Y+ SGSDD + +WR
Sbjct: 312 HTKRMQRVTAVKFSMDAQYIFSGSDDSNVRLWR 344
>TAIR|locus:2132796 [details] [associations]
symbol:AT4G35140 "AT4G35140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 KO:K11804 HOGENOM:HOG000243561 EMBL:AY120722
EMBL:BT000028 IPI:IPI00525689 RefSeq:NP_195240.2 UniGene:At.44855
ProteinModelPortal:Q8L862 SMR:Q8L862 PRIDE:Q8L862
EnsemblPlants:AT4G35140.1 GeneID:829666 KEGG:ath:AT4G35140
TAIR:At4g35140 eggNOG:NOG257676 InParanoid:Q8L862 OMA:IDPRNSN
PhylomeDB:Q8L862 ProtClustDB:CLSN2684761 Genevestigator:Q8L862
Uniprot:Q8L862
Length = 496
Score = 89 (36.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 146 PVLYNTRSSSPVAQFDH------EGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWR 197
PV + SSSP + +H +G+ N T+K F G + EYVVSGSD +++WR
Sbjct: 305 PVSKSESSSSPKDENEHSVSLVYKGHKNCETVKGVNFFGPRSEYVVSGSDCGRIFIWR 362
Score = 74 (31.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 30/110 (27%), Positives = 48/110 (43%)
Query: 16 DDHVISHDMASGDPID--FY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEA 72
D V + GD ++ F LH+ + L ++P IF + +DG V FD R+ E
Sbjct: 125 DGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPGNPHIFYTCGEDGLVQRFDLRT-EAP 183
Query: 73 TELAV--NSGP---------FHAVMFNPVEARLVATANSKDGIALYDTRK 111
TEL + P +A+ +P + L A ++ LYD R+
Sbjct: 184 TELFTCRSVDPRRRNMDAIQLNAIAIDPRNSNLFAVGGMEEYARLYDIRR 233
>FB|FBgn0036500 [details] [associations]
symbol:CG7275 species:7227 "Drosophila melanogaster"
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006911 EMBL:AE014296 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00390000005711
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:AY058590
RefSeq:NP_648767.1 UniGene:Dm.4153 SMR:Q9VUN7 STRING:Q9VUN7
EnsemblMetazoa:FBtr0075547 GeneID:39669 KEGG:dme:Dmel_CG7275
UCSC:CG7275-RA FlyBase:FBgn0036500 InParanoid:Q9VUN7
OrthoDB:EOG49S4NW GenomeRNAi:39669 NextBio:814787 Uniprot:Q9VUN7
Length = 446
Score = 120 (47.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 35/161 (21%), Positives = 69/161 (42%)
Query: 39 VYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATA 98
++ +S +P + +I A D ++L+D R + ++ + + + +NP+EA A
Sbjct: 199 LHTISYNPVETSILACCASDRSIILYDQREAQPLRKVVLTMKS-NKLAWNPMEAFNFTVA 257
Query: 99 NSKDGIALYDTRKPKEVL-MQYGSCESCMSIRFNKAGTQXXXXXXXXPPVLYNTRSSSPV 157
N + +DTRK + L + + + + ++ G + +YN S
Sbjct: 258 NEDCNLYTFDTRKLQTPLKVHFDHVSAVTDVDYSPTGKEFVSASYDKTIRIYNAHHSH-- 315
Query: 158 AQFDHEGYYNSCTMKSCCFAGTQDE-YVVSGSDDFVLYMWR 197
+ Y+ C A + D YV SGSD+ + MW+
Sbjct: 316 ---SRDIYHTKRMQHVVCVAWSLDNRYVFSGSDEMNVRMWK 353
>CGD|CAL0005164 [details] [associations]
symbol:SOF1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005164 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000210082 KO:K11806
InterPro:IPR007287 Pfam:PF04158 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717685.1 RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9
STRING:Q5A7Q9 GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 119 (46.9 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 39/148 (26%), Positives = 64/148 (43%)
Query: 51 IFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTR 110
I AS+ D ++L+D R+ ++ V S + + +NP+EA AT N LYD R
Sbjct: 234 IIASSGSDNSIVLYDIRTNTPVHKV-VTSLRNNCITWNPMEAFNFATGNEDHNGYLYDMR 292
Query: 111 KPKEVLMQY-GSCESCMSIRFNKAGTQXXXXXXXXPPVLYNTRSSSPVAQFDHEGYYNSC 169
++ L Y G + M + F G + L+ T + +
Sbjct: 293 NLQKTLKVYKGHVGAIMDVDFAPTGQELVTGSYDKTIRLWKTLDGRSKDVYHTKRMQKVF 352
Query: 170 TMKSCCFAGTQDEYVVSGSDDFVLYMWR 197
++K T +Y++SGSDD L +WR
Sbjct: 353 SVKY----STDSKYIISGSDDTNLRVWR 376
>UNIPROTKB|Q5A7Q9 [details] [associations]
symbol:SOF1 "Putative uncharacterized protein SOF1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005164 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000210082 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717685.1
RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9 STRING:Q5A7Q9
GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 119 (46.9 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 39/148 (26%), Positives = 64/148 (43%)
Query: 51 IFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIALYDTR 110
I AS+ D ++L+D R+ ++ V S + + +NP+EA AT N LYD R
Sbjct: 234 IIASSGSDNSIVLYDIRTNTPVHKV-VTSLRNNCITWNPMEAFNFATGNEDHNGYLYDMR 292
Query: 111 KPKEVLMQY-GSCESCMSIRFNKAGTQXXXXXXXXPPVLYNTRSSSPVAQFDHEGYYNSC 169
++ L Y G + M + F G + L+ T + +
Sbjct: 293 NLQKTLKVYKGHVGAIMDVDFAPTGQELVTGSYDKTIRLWKTLDGRSKDVYHTKRMQKVF 352
Query: 170 TMKSCCFAGTQDEYVVSGSDDFVLYMWR 197
++K T +Y++SGSDD L +WR
Sbjct: 353 SVKY----STDSKYIISGSDDTNLRVWR 376
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 116 (45.9 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 42/168 (25%), Positives = 78/168 (46%)
Query: 30 IDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFN 88
+ FY H V + P + +A DDG V ++ T+S LA + GP + F+
Sbjct: 19 VRFYGQHHGEVNCSAFSPDGRTLL-TASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFS 77
Query: 89 PVEARLVATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQXXXXXXXXPPVL 148
P + RL+A+++S I L+D + K + + G S ++ F+ Q ++
Sbjct: 78 P-DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIV 136
Query: 149 YNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMW 196
+ +S V G+ +S ++S F+ T D + +GS D +++W
Sbjct: 137 WEVQSGRRVHLL--VGHCDS--IQSSDFSPTSDS-LATGSWDSTVHIW 179
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 39/155 (25%), Positives = 74/155 (47%)
Query: 46 PSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIA 105
P+ D++F +A D+G + L+DTR++ A + A ++V NP A +AT +S I
Sbjct: 276 PTHDSLFCTADDNGWLKLYDTRNQSAAVQNANIGNSVNSVACNPGYATGLATGDSNGVIK 335
Query: 106 LYDTRKPKEVLMQ-YGSCESCMSIRFN-KAGTQXXXXXXXXPPVLYNTRSSSPVAQFDHE 163
++D R L + +G +S +++N K L++ + S + F H
Sbjct: 336 MWDIRNFDNSLSELHGHSDSVTQLKWNPKCHNILGSSSSDHSVKLHDMSNDSTI--FTHL 393
Query: 164 GYYNSCTMKSCCFAGTQDEYVVSG-SDDFVLYMWR 197
G+ +A D ++V+ +DD L++W+
Sbjct: 394 GHMLGVNDFDWSYA---DPWMVASVADDNSLHVWK 425
>TAIR|locus:2121164 [details] [associations]
symbol:AT4G38480 "AT4G38480" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
KO:K11804 IPI:IPI00543482 RefSeq:NP_568042.1 UniGene:At.31171
ProteinModelPortal:F4JTP6 SMR:F4JTP6 EnsemblPlants:AT4G38480.1
GeneID:830004 KEGG:ath:AT4G38480 OMA:VAGMDEY Uniprot:F4JTP6
Length = 471
Score = 88 (36.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 24/82 (29%), Positives = 36/82 (43%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPF------HAVMFN 88
H+ PV+ L+V+P F + +DG V FD R+R F HA+ +
Sbjct: 143 HQGPVHKLAVEPGSPFSFYTCGEDGAVKHFDLRTRVATNLFTCKEAKFNLVVYLHAIAVD 202
Query: 89 PVEARLVATANSKDGIALYDTR 110
P L+A A + +YD R
Sbjct: 203 PRNPGLLAVAGMDEYARVYDIR 224
Score = 71 (30.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 146 PVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAGTQDEYVVSGSDDFVLYMWR 197
P +T++ + ++ + N T+K F G + EYVVSGSD +++WR
Sbjct: 287 PYPSSTKTEERMTPQVYKEHTNRETVKGVNFFGPKCEYVVSGSDCGRIFIWR 338
>UNIPROTKB|Q2HJ56 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BC113302 IPI:IPI00691154 RefSeq:NP_001039631.1
UniGene:Bt.12659 ProteinModelPortal:Q2HJ56 STRING:Q2HJ56
PRIDE:Q2HJ56 Ensembl:ENSBTAT00000006109 GeneID:514147
KEGG:bta:514147 CTD:11137 GeneTree:ENSGT00390000017324
HOGENOM:HOG000212580 HOVERGEN:HBG001543 InParanoid:Q2HJ56 KO:K14791
OMA:RGVAKET OrthoDB:EOG4STS4J NextBio:20871193 Uniprot:Q2HJ56
Length = 500
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 41/157 (26%), Positives = 65/157 (41%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARL 94
H V LS + + ASA D V+L+D + A LAV++ + F+P EA+
Sbjct: 254 HTDAVLDLSWNKLVRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQT 313
Query: 95 VATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQXXXXXXXXPPVLYN--TR 152
+ + + +ALYD R P+E + + +N + +YN R
Sbjct: 314 LISGSYDKSVALYDCRSPEESHRMWRFSGQIERVTWNHF-SPCHFLASTDDGFVYNLDAR 372
Query: 153 SSSPV----AQFDH-EGYYNSCTMKSCCFAGTQDEYV 184
S P+ A D G S +K C + D+YV
Sbjct: 373 SDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYV 409
>MGI|MGI:1917715 [details] [associations]
symbol:Wdr77 "WD repeat domain 77" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0008284
"positive regulation of cell proliferation" evidence=IGI]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IGI] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=ISO] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IMP]
[GO:0060770 "negative regulation of epithelial cell proliferation
involved in prostate gland development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1917715 GO:GO:0005634 GO:GO:0005794 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0006357
GO:GO:0060770 GO:GO:0030374 GO:GO:0060528 CTD:79084
HOGENOM:HOG000035094 HOVERGEN:HBG052458 KO:K13221 OrthoDB:EOG4MPHQT
OMA:MRKETPP EMBL:AK012014 EMBL:AK032897 EMBL:AK048488 EMBL:AK050391
EMBL:AK163839 EMBL:AK169128 EMBL:BC005755 IPI:IPI00114819
RefSeq:NP_081708.1 UniGene:Mm.5110 ProteinModelPortal:Q99J09
SMR:Q99J09 IntAct:Q99J09 STRING:Q99J09 PhosphoSite:Q99J09
PaxDb:Q99J09 PRIDE:Q99J09 Ensembl:ENSMUST00000010278 GeneID:70465
KEGG:mmu:70465 UCSC:uc008qvo.1 GeneTree:ENSGT00390000010711
InParanoid:Q99J09 ChiTaRS:WDR77 NextBio:331685 Bgee:Q99J09
CleanEx:MM_WDR77 Genevestigator:Q99J09
GermOnline:ENSMUSG00000000561 Uniprot:Q99J09
Length = 342
Score = 114 (45.2 bits), Expect = 0.00021, P = 0.00021
Identities = 28/103 (27%), Positives = 56/103 (54%)
Query: 12 VIGNDDHVIS-HDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSR 69
V G+ D I D+A ++ Y H V ++ P +D++F S +D R+LL+DTR
Sbjct: 141 VSGSKDCCIKIWDLAQQVSLNSYRAHAGQVTCVAASPHKDSVFLSCSEDSRILLWDTRCP 200
Query: 70 EEATELAVNSGPF--HAVMFNPVEARLVATANSKDGIALYDTR 110
+ A+++A N+ + A+ ++P ++ + + ++L DT+
Sbjct: 201 KPASQMACNASGYLPTALAWHPQQSEVFVFGDENGSVSLVDTK 243
>RGD|1310362 [details] [associations]
symbol:Wdtc1 "WD and tetratricopeptide repeats 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0006006 "glucose metabolic process"
evidence=IEA;ISO] [GO:0008361 "regulation of cell size"
evidence=IEA;ISO] [GO:0032869 "cellular response to insulin
stimulus" evidence=IEA;ISO] [GO:0035264 "multicellular organism
growth" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0043086 "negative regulation of catalytic
activity" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IEA;ISO] [GO:0055082 "cellular
chemical homeostasis" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 RGD:1310362 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0032869
GO:GO:0004857 GO:GO:0001701 GO:GO:0006006 GO:GO:0008361
GO:GO:0000122 GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264
InterPro:IPR013105 Pfam:PF07719 GeneTree:ENSGT00530000062951
EMBL:CH473968 CTD:23038 KO:K11807 OMA:HRYCGHC OrthoDB:EOG4CRKZJ
GO:GO:0055082 IPI:IPI00366746 RefSeq:NP_001101378.1
UniGene:Rn.16646 Ensembl:ENSRNOT00000011311 GeneID:313020
KEGG:rno:313020 UCSC:RGD:1310362 NextBio:665469 Uniprot:D4A7Z0
Length = 676
Score = 81 (33.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 29/116 (25%), Positives = 49/116 (42%)
Query: 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFYL-HERPVYGLSVDPSQDAIFASACDDGRV 61
+GD I + + HV HD+ + I + H V ++ P F SA +DG +
Sbjct: 102 AGDRILITGAADSKVHV--HDLTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLI 159
Query: 62 LLFDTRSREEATELAVN----SGPF---HAVMFNPVEARLVATANSKDGIALYDTR 110
+D R + +E+ ++ GP + NP + +A S + LYD R
Sbjct: 160 RQYDLRENSKHSEVLIDLTEYCGPMVEAKCLTVNPQDNNCLAVGASGPFVRLYDIR 215
Score = 79 (32.9 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 159 QFDHEGYYNSCT-MKSCCFAGTQDEYVVSGSDDFVLYMW 196
QF + G+ N+ T +K F G+ +Y+VSGSDD ++W
Sbjct: 526 QFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIW 564
>MGI|MGI:2685541 [details] [associations]
symbol:Wdtc1 "WD and tetratricopeptide repeats 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0004857 "enzyme inhibitor activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006006 "glucose metabolic process" evidence=IMP] [GO:0008361
"regulation of cell size" evidence=IMP] [GO:0032869 "cellular
response to insulin stimulus" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042393 "histone
binding" evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0043086 "negative regulation of catalytic
activity" evidence=IDA] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IMP;IDA] [GO:0055082 "cellular
chemical homeostasis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2685541
GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0032869 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00530000062951 CTD:23038
HOGENOM:HOG000231334 HOVERGEN:HBG059105 KO:K11807 OMA:HRYCGHC
OrthoDB:EOG4CRKZJ ChiTaRS:WDTC1 GO:GO:0055082 EMBL:BC048824
EMBL:BC057107 IPI:IPI00108450 RefSeq:NP_955010.1 UniGene:Mm.226576
ProteinModelPortal:Q80ZK9 SMR:Q80ZK9 STRING:Q80ZK9
PhosphoSite:Q80ZK9 PaxDb:Q80ZK9 PRIDE:Q80ZK9
Ensembl:ENSMUST00000043305 GeneID:230796 KEGG:mmu:230796
InParanoid:Q80ZK9 NextBio:380168 Bgee:Q80ZK9 CleanEx:MM_WDTC1
Genevestigator:Q80ZK9 GermOnline:ENSMUSG00000037622 Uniprot:Q80ZK9
Length = 677
Score = 81 (33.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 29/116 (25%), Positives = 49/116 (42%)
Query: 3 SGDPIKVLRVIGNDDHVISHDMASGDPIDFYL-HERPVYGLSVDPSQDAIFASACDDGRV 61
+GD I + + HV HD+ + I + H V ++ P F SA +DG +
Sbjct: 102 AGDRILITGAADSKVHV--HDLTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLI 159
Query: 62 LLFDTRSREEATELAVN----SGPF---HAVMFNPVEARLVATANSKDGIALYDTR 110
+D R + +E+ ++ GP + NP + +A S + LYD R
Sbjct: 160 RQYDLRENSKHSEVLIDLTEYCGPMVEAKCLTVNPQDNNCLAVGASGPFVRLYDIR 215
Score = 79 (32.9 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 159 QFDHEGYYNSCT-MKSCCFAGTQDEYVVSGSDDFVLYMW 196
QF + G+ N+ T +K F G+ +Y+VSGSDD ++W
Sbjct: 527 QFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIW 565
>UNIPROTKB|Q13610 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471054 GO:GO:0006351 CTD:11137 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:L07758 EMBL:AK290681 IPI:IPI00014298 PIR:I39360
RefSeq:NP_008993.1 UniGene:Hs.506652 ProteinModelPortal:Q13610
SMR:Q13610 IntAct:Q13610 STRING:Q13610 PhosphoSite:Q13610
DMDM:2494897 PaxDb:Q13610 PeptideAtlas:Q13610 PRIDE:Q13610
DNASU:11137 Ensembl:ENST00000412830 GeneID:11137 KEGG:hsa:11137
UCSC:uc001tmo.1 GeneCards:GC12P108079 HGNC:HGNC:17015 HPA:HPA038707
neXtProt:NX_Q13610 PharmGKB:PA142671112 InParanoid:Q13610
PhylomeDB:Q13610 ChiTaRS:PWP1 GenomeRNAi:11137 NextBio:42336
ArrayExpress:Q13610 Bgee:Q13610 CleanEx:HS_PWP1
Genevestigator:Q13610 GermOnline:ENSG00000136045 Uniprot:Q13610
Length = 501
Score = 114 (45.2 bits), Expect = 0.00039, P = 0.00039
Identities = 41/157 (26%), Positives = 64/157 (40%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARL 94
H V LS + + ASA D V+L+D + A LAV++ + F+P EA+
Sbjct: 255 HTDAVLDLSWNKLIRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQT 314
Query: 95 VATANSKDGIALYDTRKPKEVLMQYGSCESCMSIRFNKAGTQXXXXXXXXPPVLYN--TR 152
+ + + +ALYD R P E + + +N + +YN R
Sbjct: 315 LISGSYDKSVALYDCRSPDESHRMWRFSGQIERVTWNHF-SPCHFLASTDDGFVYNLDAR 373
Query: 153 SSSPV----AQFDH-EGYYNSCTMKSCCFAGTQDEYV 184
S P+ A D G S +K C + D+YV
Sbjct: 374 SDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYV 410
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 111 (44.1 bits), Expect = 0.00052, P = 0.00052
Identities = 45/201 (22%), Positives = 92/201 (45%)
Query: 10 LRVIGNDDHVIS-HDMASGDPIDFYL-HERPVYGLSVDPSQDAIFASACDDGRVLLFDTR 67
L V G+DD + ++++G + H V+ + +P + I + + D+ V ++D R
Sbjct: 128 LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES-VRIWDVR 186
Query: 68 SREEATELAVNSGPFHAVMFNPVEARLVATANSKDGIA-LYDTRKPKEVLMQYGSCESCM 126
+ + L +S P AV FN + L+ ++ S DG+ ++DT + + +
Sbjct: 187 TGKCLKTLPAHSDPVSAVHFNR-DGSLIVSS-SYDGLCRIWDTASGQCLKTLIDDDNPPV 244
Query: 127 S-IRFNKAGTQXXXXXXXXPPVLYNTRSSSPVAQFDHEGYYNSCTMKSCCFAG---TQDE 182
S ++F+ G L++ + + G+ N K C FA T +
Sbjct: 245 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT--GHKNE---KYCIFANFSVTGGK 299
Query: 183 YVVSGSDDFVLYMWRVPRDDI 203
++VSGS+D ++Y+W + ++
Sbjct: 300 WIVSGSEDNMVYIWNLQSKEV 320
>UNIPROTKB|F1NUL8 [details] [associations]
symbol:WDR77 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=IEA] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA] [GO:0060770 "negative
regulation of epithelial cell proliferation involved in prostate
gland development" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006357 GO:GO:0060770
GO:GO:0030374 GeneTree:ENSGT00390000010711 EMBL:AADN02044988
IPI:IPI00923799 Ensembl:ENSGALT00000002188 ArrayExpress:F1NUL8
Uniprot:F1NUL8
Length = 346
Score = 110 (43.8 bits), Expect = 0.00063, P = 0.00063
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 14 GNDDHVISHDMASGDPIDFY-LHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEA 72
G D V D+ + Y H V ++ P +D IF S +D R+LL+DTR + A
Sbjct: 142 GRDFSVKVWDLPQQAVLHSYRAHSDAVTCVAACPGKDTIFLSCAEDERILLWDTRCPKPA 201
Query: 73 TELAV---------NSGPFHAVMFNPVEARLVATANSKDGIALYDTRKPKEVL 116
T +A+ N P +V+++P E+ + A + +AL DT+ P L
Sbjct: 202 TRIAICLLTVCSACNYLPT-SVLWHPQESDIFALGDESGTVALVDTKNPDSAL 253
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 119 (46.9 bits), Expect = 0.00066, P = 0.00066
Identities = 50/205 (24%), Positives = 91/205 (44%)
Query: 5 DPIKVLRVIGNDDHVISHDMASGDPI-DFYLHERPVYGLSVDPSQDAIFASACDDGRVLL 63
D K L D+ VI D+ G+ I F H R V P+ + + S D +++
Sbjct: 1574 DDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIII 1633
Query: 64 FDTRSREEATEL-AVNSGPFHAVMFNPVEARLVATANSKDG-IAL---YDT---RKPKEV 115
F+T + + +S P ++ ++P + L+A++ S DG I + +DT + K V
Sbjct: 1634 FNTSDKNIFRNFRSAHSKPVNSCCWSP-DGTLIASS-SWDGTIKIWNPFDTIAKDRLKHV 1691
Query: 116 L---MQYGSCESCMSIRFNKAGTQXXXXXXXXPPVLYNTRSSSPVAQF-DHEGYYNSCTM 171
+ + YGS +SC +F+ Q +L++ S ++ +H N C++
Sbjct: 1692 IDASLSYGSIKSC---KFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSL 1748
Query: 172 KSCCFAGTQDEYVVSGSDDFVLYMW 196
+ Y+V+GSDD +W
Sbjct: 1749 SN------DGNYIVTGSDDATAKVW 1767
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 111 (44.1 bits), Expect = 0.00069, P = 0.00069
Identities = 31/92 (33%), Positives = 48/92 (52%)
Query: 29 PI-DFYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTR--SREEATE-LAVNSGPFHA 84
PI ++ H V + P +A+ AS DD + + DTR EEA + + +S +A
Sbjct: 227 PIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINA 286
Query: 85 VMFNPVEARLVATANSKDGIALYDTRKPKEVL 116
V NP L+ATA++ +AL+D R P + L
Sbjct: 287 VAINPFNDYLLATASADKTVALWDLRNPYQRL 318
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 110 (43.8 bits), Expect = 0.00070, P = 0.00070
Identities = 42/177 (23%), Positives = 80/177 (45%)
Query: 35 HERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARL 94
H V+ + +P Q ++ S D V ++D R+ L +S P AV FN + L
Sbjct: 162 HTNYVFCCNFNP-QSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNR-DGSL 219
Query: 95 VATANSKDGIA-LYDTRKPKEVLMQYGSCESCMS-IRFNKAGTQXXXXXXXXPPVLYNTR 152
+ T+ S DG+ ++DT + V ++ ++F+ G L++
Sbjct: 220 I-TSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFG 278
Query: 153 SSSPVAQFDHEGYYNSCTMKSCCFAG---TQDEYVVSGSDDFVLYMWRVPRDDIYVS 206
+ Q+ +G+ N+ K C FA T ++++SGS+D +Y+W + ++ S
Sbjct: 279 KGKTLKQY--QGHENN---KYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQS 330
>UNIPROTKB|Q96EX3 [details] [associations]
symbol:WDR34 "WD repeat-containing protein 34" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:AL356481 EMBL:BC001614 EMBL:BC011874 IPI:IPI00306130
RefSeq:NP_443076.2 UniGene:Hs.495240 ProteinModelPortal:Q96EX3
SMR:Q96EX3 IntAct:Q96EX3 STRING:Q96EX3 PhosphoSite:Q96EX3
DMDM:88985038 PRIDE:Q96EX3 DNASU:89891 Ensembl:ENST00000372715
GeneID:89891 KEGG:hsa:89891 UCSC:uc004bvq.1 CTD:89891
GeneCards:GC09M131395 HGNC:HGNC:28296 HPA:HPA040764 HPA:HPA041091
MIM:613363 neXtProt:NX_Q96EX3 PharmGKB:PA134951680 eggNOG:NOG319112
HOGENOM:HOG000232095 HOVERGEN:HBG058945 InParanoid:Q96EX3
OMA:PVYCLEF OrthoDB:EOG43TZVB GenomeRNAi:89891 NextBio:76421
ArrayExpress:Q96EX3 Bgee:Q96EX3 CleanEx:HS_WDR34
Genevestigator:Q96EX3 GermOnline:ENSG00000119333 Uniprot:Q96EX3
Length = 536
Score = 112 (44.5 bits), Expect = 0.00074, P = 0.00074
Identities = 33/109 (30%), Positives = 51/109 (46%)
Query: 32 FYLHERPVYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVE 91
F H P+Y +S P +F SA DG V L+ T L ++ AV ++PV
Sbjct: 388 FSPHGGPIYSVSCSPFHRNLFLSAGTDGHVHLYSMLQAPPLTSLQLSLKYLFAVRWSPVR 447
Query: 92 ARLVATANSKDGIALYDTRKPKE---VLMQYGSCESCM-SIRFNKAGTQ 136
+ A A+ K + L+D +K + VL++ ES + + FN TQ
Sbjct: 448 PLVFAAASGKGDVQLFDLQKSSQKPTVLIKQTQDESPVYCLEFNSQQTQ 496
>SGD|S000003934 [details] [associations]
symbol:SOF1 "Essential protein required for biogenesis of the
40S ribosomal subunit" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000003934 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006945 GO:GO:0030686 EMBL:X91488 GO:GO:0032040
GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082 KO:K11806
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 OrthoDB:EOG4GXJWG
EMBL:X70052 EMBL:Z73116 PIR:S35323 RefSeq:NP_013090.1
ProteinModelPortal:P33750 SMR:P33750 DIP:DIP-746N IntAct:P33750
MINT:MINT-635582 STRING:P33750 PaxDb:P33750 PeptideAtlas:P33750
EnsemblFungi:YLL011W GeneID:850649 KEGG:sce:YLL011W CYGD:YLL011w
NextBio:966596 Genevestigator:P33750 GermOnline:YLL011W
GO:GO:0000462 Uniprot:P33750
Length = 489
Score = 111 (44.1 bits), Expect = 0.00084, P = 0.00084
Identities = 39/161 (24%), Positives = 65/161 (40%)
Query: 39 VYGLSVDPSQDAIFASACDDGRVLLFDTRSREEATELAVNSGPFHAVMFNPVEARLVATA 98
+ L + ++ I AS D ++L+D R+ T+ V + +A+ +NP+EA TA
Sbjct: 222 ITSLKFNQNETDILASTGSDNSIVLYDLRTNSP-TQKIVQTMRTNAICWNPMEAFNFVTA 280
Query: 99 NSKDGIALYDTRKPKEVLMQYGSCESC-MSIRFNKAGTQXXXXXXXXPPVLYNTRSSSPV 157
N YD R L + S M + F+ G + +Y T
Sbjct: 281 NEDHNAYYYDMRNLSRSLNVFKDHVSAVMDVDFSPTGDEIVTGSYDKSIRIYKTNHGH-- 338
Query: 158 AQFDHEGYYNSCTMKSCCFAGTQD-EYVVSGSDDFVLYMWR 197
E Y+ + D +Y++SGSDD + +WR
Sbjct: 339 ---SREIYHTKRMQHVFQVKYSMDSKYIISGSDDGNVRLWR 376
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 224 216 0.00088 112 3 11 22 0.37 33
32 0.50 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 600 (64 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.06u 0.08s 17.14t Elapsed: 00:00:12
Total cpu time: 17.07u 0.08s 17.15t Elapsed: 00:00:12
Start: Thu Aug 15 12:06:28 2013 End: Thu Aug 15 12:06:40 2013