BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11354
(120 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332029766|gb|EGI69635.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Acromyrmex echinatior]
Length = 523
Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 86/132 (65%), Positives = 106/132 (80%), Gaps = 13/132 (9%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTN-------------VHT 47
MSDDED++YVKKQ TVHYGSLEE ER RLAA + D+++ TN VH
Sbjct: 1 MSDDEDLVYVKKQKTVHYGSLEEAERARLAATIETTDEEKDVTNANDVTNVSASGGNVHI 60
Query: 48 SNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAE 107
SN YME++DEM+KD+QALL+EFERRKKAR +NVSTDD++VK +LRQLGEPICLFGEGPA+
Sbjct: 61 SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKHLRQLGEPICLFGEGPAD 120
Query: 108 RRSRLRDLLSSL 119
RR+RLR+LL+S+
Sbjct: 121 RRTRLRELLASV 132
>gi|48116262|ref|XP_393186.1| PREDICTED: u4/U6 small nuclear ribonucleoprotein Prp4 [Apis
mellifera]
Length = 525
Score = 174 bits (440), Expect = 8e-42, Method: Composition-based stats.
Identities = 85/132 (64%), Positives = 106/132 (80%), Gaps = 13/132 (9%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYT-------------NVHT 47
MSDDED++YVKKQ TVHYGSLEE ER RLAA + ++++ T N+H
Sbjct: 1 MSDDEDLVYVKKQKTVHYGSLEEAERARLAAVAESSEEEKDTTTLGDNVNTVATLANIHI 60
Query: 48 SNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAE 107
SN YME++DEM+KD+QALL+EFERRKKAR +NVSTDD++VK NLRQLGEPICLFGEGPA+
Sbjct: 61 SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKRNLRQLGEPICLFGEGPAD 120
Query: 108 RRSRLRDLLSSL 119
RR+RLR+LL++L
Sbjct: 121 RRTRLRELLANL 132
>gi|380028595|ref|XP_003697980.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like [Apis
florea]
Length = 525
Score = 174 bits (440), Expect = 9e-42, Method: Composition-based stats.
Identities = 85/132 (64%), Positives = 106/132 (80%), Gaps = 13/132 (9%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYT-------------NVHT 47
MSDDED++YVKKQ TVHYGSLEE ER RLAA + ++++ T N+H
Sbjct: 1 MSDDEDLVYVKKQKTVHYGSLEEAERARLAAVAESSEEEKDTTTLGDNVNNVATLANIHI 60
Query: 48 SNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAE 107
SN YME++DEM+KD+QALL+EFERRKKAR +NVSTDD++VK NLRQLGEPICLFGEGPA+
Sbjct: 61 SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKRNLRQLGEPICLFGEGPAD 120
Query: 108 RRSRLRDLLSSL 119
RR+RLR+LL++L
Sbjct: 121 RRTRLRELLANL 132
>gi|307194495|gb|EFN76787.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Harpegnathos saltator]
Length = 523
Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats.
Identities = 86/132 (65%), Positives = 106/132 (80%), Gaps = 13/132 (9%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYT-------------NVHT 47
MSDDED++YVKKQ TVHYGSLEE ER RLAA +V D ++ T NVH
Sbjct: 1 MSDDEDLVYVKKQKTVHYGSLEEAERTRLAAAVEVTDGEKDVTTTDDITNASISAGNVHI 60
Query: 48 SNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAE 107
SN YME+++EM+KD+QALL+EFERRKKAR +NVSTDD++VK +LRQLGEPICLFGEGPA+
Sbjct: 61 SNEYMELEEEMSKDRQALLEEFERRKKARQINVSTDDSEVKKHLRQLGEPICLFGEGPAD 120
Query: 108 RRSRLRDLLSSL 119
RR+RLR+LL+S+
Sbjct: 121 RRTRLRELLASV 132
>gi|307168954|gb|EFN61840.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Camponotus floridanus]
Length = 526
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 85/135 (62%), Positives = 103/135 (76%), Gaps = 16/135 (11%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAA----------------NKDVDDDQEKYTN 44
MSDDED++YVKKQ TVHYGSLEE ER RLAA D+ + N
Sbjct: 1 MSDDEDLVYVKKQKTVHYGSLEEAERARLAALQVAVEAADEEKDATNANDITNASNLVGN 60
Query: 45 VHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEG 104
VH SN YME++DEM+KD+QALL+EFERRKKAR +NVSTDD++VK +LRQLGEPICLFGEG
Sbjct: 61 VHISNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKHLRQLGEPICLFGEG 120
Query: 105 PAERRSRLRDLLSSL 119
PA+RR+RLR+LL+S+
Sbjct: 121 PADRRTRLRELLASV 135
>gi|340708706|ref|XP_003392963.1| PREDICTED: u4/U6 small nuclear ribonucleoprotein Prp4-like [Bombus
terrestris]
Length = 525
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 83/132 (62%), Positives = 104/132 (78%), Gaps = 13/132 (9%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTN-------------VHT 47
MSDDED++YVKKQ TVHYGSLEE ER RL A + ++++ TN +H
Sbjct: 1 MSDDEDLVYVKKQKTVHYGSLEEAERARLVAVAESSEEEKNITNLGDNANATATLGNIHI 60
Query: 48 SNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAE 107
SN YME++DEM+KD+QALL+EFERRKKAR +NVSTDD++VK NLRQL EPICLFGEGPA+
Sbjct: 61 SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLDEPICLFGEGPAD 120
Query: 108 RRSRLRDLLSSL 119
RR+RLR+LL++L
Sbjct: 121 RRTRLRELLANL 132
>gi|350413006|ref|XP_003489846.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like [Bombus
impatiens]
Length = 525
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 83/132 (62%), Positives = 104/132 (78%), Gaps = 13/132 (9%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTN-------------VHT 47
MSDDED++YVKKQ TVHYGSLEE ER RL A + ++++ TN +H
Sbjct: 1 MSDDEDLVYVKKQKTVHYGSLEEAERARLVAVAESAEEEKTTTNLGDNASATATLGNIHI 60
Query: 48 SNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAE 107
SN YME++DEM+KD+QALL+EFERRKKAR +NVSTDD++VK NLRQL EPICLFGEGPA+
Sbjct: 61 SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLDEPICLFGEGPAD 120
Query: 108 RRSRLRDLLSSL 119
RR+RLR+LL++L
Sbjct: 121 RRTRLRELLANL 132
>gi|242023811|ref|XP_002432324.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Pediculus
humanus corporis]
gi|212517747|gb|EEB19586.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Pediculus
humanus corporis]
Length = 509
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 101/123 (82%), Gaps = 4/123 (3%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYT----NVHTSNVYMEIDD 56
MSDDE++IYVK+ +HYGSLEEQER +L + D D++ + N+H S+ YM+I+D
Sbjct: 1 MSDDEEIIYVKRPKKIHYGSLEEQERAKLLESLKDDADKDAGSLLSGNIHISDEYMDIED 60
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
E++KD+ ALL+EFERRK+AR ++VSTDD+QVK NLRQLGEPICLFGEGPA+RRSRLRDLL
Sbjct: 61 EVSKDRAALLEEFERRKRARQIHVSTDDDQVKKNLRQLGEPICLFGEGPADRRSRLRDLL 120
Query: 117 SSL 119
S L
Sbjct: 121 SKL 123
>gi|189234886|ref|XP_974218.2| PREDICTED: similar to wd-repeat protein [Tribolium castaneum]
gi|270001442|gb|EEZ97889.1| hypothetical protein TcasGA2_TC000271 [Tribolium castaneum]
Length = 511
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 82/126 (65%), Positives = 96/126 (76%), Gaps = 7/126 (5%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTN-------VHTSNVYME 53
MSDDED YVKK +HYGSLEE ER RLAA DD EK + VH S YME
Sbjct: 1 MSDDEDAPYVKKTKNIHYGSLEEAERARLAAGDGNDDSNEKAESTSANPPQVHISTEYME 60
Query: 54 IDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLR 113
++D M++DKQALL+EFERR+KAR +NVSTDD +VK NLRQLGEPICLFGEGPA+RRSRLR
Sbjct: 61 LEDAMSRDKQALLEEFERRRKARSINVSTDDAEVKRNLRQLGEPICLFGEGPADRRSRLR 120
Query: 114 DLLSSL 119
++LS +
Sbjct: 121 EILSRI 126
>gi|193666990|ref|XP_001949663.1| PREDICTED: u4/U6 small nuclear ribonucleoprotein Prp4-like
[Acyrthosiphon pisum]
Length = 507
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/120 (63%), Positives = 99/120 (82%), Gaps = 3/120 (2%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYT---NVHTSNVYMEIDDE 57
MSDDE++ YVKKQ T+HYGSLE+QER RL++ ++D E N++ SN Y +++D
Sbjct: 1 MSDDEEITYVKKQKTIHYGSLEDQERIRLSSLAFTENDGEPKVVGGNINVSNEYFDLEDA 60
Query: 58 MAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
++KDKQALL+EFER+KKARHV VSTDD++VK NLR+LG+ ICLFGEGPAERR+RLR+LLS
Sbjct: 61 ISKDKQALLEEFERKKKARHVQVSTDDDEVKKNLRKLGQAICLFGEGPAERRNRLRELLS 120
>gi|156538050|ref|XP_001605877.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like [Nasonia
vitripennis]
Length = 515
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 100/126 (79%), Gaps = 7/126 (5%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYT-------NVHTSNVYME 53
MSDDE+V Y ++ TVHYGSLEE ER R+ + + D + + + NVHTSN YME
Sbjct: 1 MSDDEEVQYTRRPRTVHYGSLEESERNRINSGINNDSNNDDSSMPSALIGNVHTSNEYME 60
Query: 54 IDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLR 113
++D+M+KD+QALL+EFERR KAR +NVSTDD++VK NLR LGEPICLFGEGPA+RR+RL+
Sbjct: 61 LEDDMSKDRQALLEEFERRNKARKINVSTDDSEVKKNLRHLGEPICLFGEGPADRRNRLK 120
Query: 114 DLLSSL 119
+LL+SL
Sbjct: 121 ELLASL 126
>gi|427797541|gb|JAA64222.1| Putative u4/u6 small nuclear ribonucleoprotein prp4, partial
[Rhipicephalus pulchellus]
Length = 404
Score = 154 bits (388), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 93/128 (72%), Gaps = 11/128 (8%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLA---ANKDVDDDQEKY--------TNVHTSN 49
MSDDED+ YVK+Q VHYGSLEE+ER+RLA A DDD + NVH S
Sbjct: 24 MSDDEDIAYVKRQKVVHYGSLEERERQRLADREAEDGSDDDSQNTDLKAAMASGNVHISE 83
Query: 50 VYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERR 109
YME++DE +DKQ LL+EFERRKKAR +NVSTDD +VK LR +GEPICLFGEGPA+RR
Sbjct: 84 EYMEMEDEGGRDKQQLLEEFERRKKARQINVSTDDTEVKSTLRDMGEPICLFGEGPADRR 143
Query: 110 SRLRDLLS 117
RLR LL+
Sbjct: 144 ERLRHLLA 151
>gi|427798685|gb|JAA64794.1| Putative u4/u6 small nuclear ribonucleoprotein prp4, partial
[Rhipicephalus pulchellus]
Length = 466
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 93/128 (72%), Gaps = 11/128 (8%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLA---ANKDVDDDQEKY--------TNVHTSN 49
MSDDED+ YVK+Q VHYGSLEE+ER+RLA A DDD + NVH S
Sbjct: 1 MSDDEDIAYVKRQKVVHYGSLEERERQRLADREAEDGSDDDSQNTDLKAAMASGNVHISE 60
Query: 50 VYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERR 109
YME++DE +DKQ LL+EFERRKKAR +NVSTDD +VK LR +GEPICLFGEGPA+RR
Sbjct: 61 EYMEMEDEGGRDKQQLLEEFERRKKARQINVSTDDTEVKSTLRDMGEPICLFGEGPADRR 120
Query: 110 SRLRDLLS 117
RLR LL+
Sbjct: 121 ERLRHLLA 128
>gi|322801557|gb|EFZ22214.1| hypothetical protein SINV_07360 [Solenopsis invicta]
Length = 523
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 78/132 (59%), Positives = 97/132 (73%), Gaps = 13/132 (9%)
Query: 1 MSDDEDVIYVKKQNTVHYGSL-------------EEQERKRLAANKDVDDDQEKYTNVHT 47
MSDDED++YVKKQ TVHYGSL E K + + D + NVH
Sbjct: 1 MSDDEDLVYVKKQKTVHYGSLEEAERARLAAAVESTDEEKDVTSANDAVNASASGGNVHI 60
Query: 48 SNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAE 107
SN YME++DEM+KD+QALL+EFERRKKAR +NVSTDD++VK +LRQL EPICLFGEGPA+
Sbjct: 61 SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKHLRQLDEPICLFGEGPAD 120
Query: 108 RRSRLRDLLSSL 119
RR+RLR+LL+S+
Sbjct: 121 RRTRLRELLASV 132
>gi|346464487|gb|AEO32088.1| hypothetical protein [Amblyomma maculatum]
Length = 522
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 78/132 (59%), Positives = 97/132 (73%), Gaps = 13/132 (9%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAAN----KDVDDDQEKYT---------NVHT 47
MSDDED+ YVK+Q VHYGSLEE+ER+RLA +D D+ + T N+H
Sbjct: 1 MSDDEDIAYVKRQKVVHYGSLEEKERQRLAEKDAGAEDGSDEDSQSTDLRAALASGNIHI 60
Query: 48 SNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAE 107
S+ YM+I+DE +DKQ LL+EFERRKKAR +NVSTDD +VK LR++GEPICLFGEGPA+
Sbjct: 61 SDEYMDIEDEGGRDKQQLLEEFERRKKARQINVSTDDTEVKSTLREMGEPICLFGEGPAD 120
Query: 108 RRSRLRDLLSSL 119
RR RLR LL+ L
Sbjct: 121 RRERLRHLLAQL 132
>gi|332372646|gb|AEE61465.1| unknown [Dendroctonus ponderosae]
Length = 507
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 92/126 (73%), Gaps = 8/126 (6%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKD------VDDDQEKYTNVH-TSNVYME 53
MSDDE V Y KK T+HYGSLE+ ER RL D D D H +N YME
Sbjct: 1 MSDDE-VSYAKKIKTIHYGSLEDAERARLENTHDDGKSDTSDSDSGVPPPQHEGNNEYME 59
Query: 54 IDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLR 113
+++ M++DKQALL+EFERRKKAR +NVSTDD +VK NLRQLGEPICLFGEGPAERRSRLR
Sbjct: 60 LEEAMSRDKQALLEEFERRKKARSINVSTDDGEVKRNLRQLGEPICLFGEGPAERRSRLR 119
Query: 114 DLLSSL 119
D+LS L
Sbjct: 120 DILSRL 125
>gi|383856641|ref|XP_003703816.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like
[Megachile rotundata]
Length = 525
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 83/132 (62%), Positives = 106/132 (80%), Gaps = 13/132 (9%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTN-------------VHT 47
MSDDED++YVKKQ TVHYGSLEE ER RLAA + ++++ TN +H
Sbjct: 1 MSDDEDLVYVKKQKTVHYGSLEEAERARLAAAAESSEEEKDSTNLGDSINATITLANIHI 60
Query: 48 SNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAE 107
SN YME++DEM+K++QALL+EFER+KKAR +NVSTDD++VK NLRQLGEPICLFGEGPA+
Sbjct: 61 SNEYMELEDEMSKNRQALLEEFERKKKARQINVSTDDSEVKKNLRQLGEPICLFGEGPAD 120
Query: 108 RRSRLRDLLSSL 119
RR+RLR+LL++L
Sbjct: 121 RRTRLRELLANL 132
>gi|157124855|ref|XP_001660556.1| wd-repeat protein [Aedes aegypti]
gi|108873844|gb|EAT38069.1| AAEL010013-PA [Aedes aegypti]
Length = 508
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 93/125 (74%), Gaps = 6/125 (4%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVD------DDQEKYTNVHTSNVYMEI 54
MSDDE+++YVK+ T+HYGSLE+ ER R + D + ++TS+ Y ++
Sbjct: 1 MSDDEELVYVKRPKTIHYGSLEDTERSRQMKDSGSDLYSGAGSSSDIIGQIYTSSEYFDL 60
Query: 55 DDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRD 114
++E++KDK ALL+EFER+KKAR ++VSTDD++VK NLR L EPIC FGEGPAERR RL++
Sbjct: 61 ENEVSKDKAALLEEFERKKKARQIHVSTDDSEVKKNLRALNEPICYFGEGPAERRIRLKE 120
Query: 115 LLSSL 119
LL+SL
Sbjct: 121 LLASL 125
>gi|170052593|ref|XP_001862292.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Culex quinquefasciatus]
gi|167873447|gb|EDS36830.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Culex quinquefasciatus]
Length = 506
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 91/121 (75%), Gaps = 2/121 (1%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYT--NVHTSNVYMEIDDEM 58
MSDDE++++ K+ T+HYGSLE+ ER R A+ ++TS+ Y ++++E+
Sbjct: 1 MSDDEELVFAKRPRTIHYGSLEDSERARQMADSGGPSGSSSGDIGQIYTSSDYFDLENEV 60
Query: 59 AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+KDK ALL+EFER+KKAR ++VSTDD++VK NLR L EPIC FGEGPAERR RL++LL++
Sbjct: 61 SKDKAALLEEFERKKKARQIHVSTDDSEVKRNLRALNEPICYFGEGPAERRIRLKELLAA 120
Query: 119 L 119
L
Sbjct: 121 L 121
>gi|357615969|gb|EHJ69928.1| putative wd-repeat protein [Danaus plexippus]
Length = 532
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 76/124 (61%), Positives = 98/124 (79%), Gaps = 7/124 (5%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAAN-----KDVDDDQEKYTNVHTSNVYMEID 55
MSDDE V+ VKK ++YGSLEEQE+ RLAA + V + ++ ++ SN YME++
Sbjct: 1 MSDDE-VVAVKKPK-LYYGSLEEQEKARLAALAAAAREGVKESAKETGDIQISNEYMELE 58
Query: 56 DEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
DE+ KDK+ALL+EFERR+KAR +NVSTDD++V+ +LRQLGEP+CLFGEGPAERR RLRDL
Sbjct: 59 DEITKDKKALLEEFERRRKARQLNVSTDDDEVRRSLRQLGEPVCLFGEGPAERRVRLRDL 118
Query: 116 LSSL 119
LS L
Sbjct: 119 LSYL 122
>gi|312371485|gb|EFR19662.1| hypothetical protein AND_22040 [Anopheles darlingi]
Length = 507
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 88/123 (71%), Gaps = 4/123 (3%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRL----AANKDVDDDQEKYTNVHTSNVYMEIDD 56
MSD E +Y K+ T++YGSLEE +R + ++ + Y ++ TS YM +D
Sbjct: 1 MSDSEQSVYAKRSKTIYYGSLEESDRWHVDRKDTEGENGASGKTDYNSLLTSAEYMTLDA 60
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
E+AKDK ALL+EFERRKKAR ++VSTDD++VK LR+L EPIC FGEGPAERR RL++LL
Sbjct: 61 EVAKDKAALLEEFERRKKARLIHVSTDDDEVKSALRKLNEPICYFGEGPAERRLRLKELL 120
Query: 117 SSL 119
S+L
Sbjct: 121 SAL 123
>gi|195376195|ref|XP_002046882.1| GJ13130 [Drosophila virilis]
gi|194154040|gb|EDW69224.1| GJ13130 [Drosophila virilis]
Length = 541
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 96/158 (60%), Gaps = 39/158 (24%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAAN-------------------KDVDDDQEK 41
MSDD+D+ Y+K+Q T+HYGSLEE ERKR A +D+D D++
Sbjct: 1 MSDDDDIQYIKRQRTLHYGSLEETERKRQTAAASSVAGTTPAAVTTTTAQLEDIDSDEDY 60
Query: 42 YTNVHTSNV--------------------YMEIDDEMAKDKQALLQEFERRKKARHVNVS 81
+ SN Y +++ EM +DK ALL+EFER+K+AR +NVS
Sbjct: 61 EESNKKSNATKVAMPPPTAASLANKIDDDYFDLEGEMERDKVALLEEFERKKRARQINVS 120
Query: 82 TDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
TDD+++K NLRQL EPIC FGEGPAERR RL++LL+SL
Sbjct: 121 TDDSEIKNNLRQLNEPICYFGEGPAERRRRLKELLASL 158
>gi|195012996|ref|XP_001983786.1| GH15383 [Drosophila grimshawi]
gi|193897268|gb|EDV96134.1| GH15383 [Drosophila grimshawi]
Length = 559
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 99/176 (56%), Gaps = 57/176 (32%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKR-----LAAN----------------------- 32
MSDD+D+ Y+K+Q T+HYGSLEE ERKR A+N
Sbjct: 1 MSDDDDIQYIKRQRTLHYGSLEETERKRQNAATTASNAGTTPAAAAAAASTAATTTTTST 60
Query: 33 ------KDVDDDQEKYTNVH----TSNV-------------------YMEIDDEMAKDKQ 63
+D+D D++ Y + TSN Y +++ EM +DK
Sbjct: 61 ATGAQLEDIDSDEDTYEEANKKSNTSNTKGAMAPPTAASLANKIDDDYFDLESEMERDKV 120
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
ALL+EFER+K+AR +NVSTDD ++K NLRQL EPIC FGEGPAERR RL++LL+SL
Sbjct: 121 ALLEEFERKKRARQINVSTDDAEIKSNLRQLNEPICFFGEGPAERRRRLKELLASL 176
>gi|195126092|ref|XP_002007508.1| GI12988 [Drosophila mojavensis]
gi|193919117|gb|EDW17984.1| GI12988 [Drosophila mojavensis]
Length = 540
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 93/157 (59%), Gaps = 38/157 (24%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAAN------------------KDVDDDQEKY 42
MSDD+D+ Y+K+Q T+HYGSLEE ERKR +D+D D++
Sbjct: 1 MSDDDDIQYIKRQRTLHYGSLEETERKRQTGAASSVTGTTPAATTTAAQLEDIDSDEDYE 60
Query: 43 TNVHTSNV--------------------YMEIDDEMAKDKQALLQEFERRKKARHVNVST 82
SN Y +++ EM +DK ALL+EFER+K+AR +NVST
Sbjct: 61 ETNKKSNATKVGMPPPTAASLANKIDDDYFDLETEMERDKVALLEEFERKKRARQINVST 120
Query: 83 DDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
DD ++K NLRQL EPIC FGEGPAERR RL++LL+SL
Sbjct: 121 DDAEIKNNLRQLNEPICYFGEGPAERRRRLKELLASL 157
>gi|158285020|ref|XP_308051.4| AGAP002144-PA [Anopheles gambiae str. PEST]
gi|157020873|gb|EAA03818.4| AGAP002144-PA [Anopheles gambiae str. PEST]
Length = 505
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 88/121 (72%), Gaps = 3/121 (2%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTNVH--TSNVYMEIDDEM 58
MSD E +Y K+ T+HYGSLEE +R + KD D D T+ T+ YM +D+++
Sbjct: 1 MSDSEQSVYAKRTKTIHYGSLEESDRWHVD-RKDNDADGSGRTDYSQLTTADYMALDEDV 59
Query: 59 AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
AK+K ALL+EFERRKKAR ++VSTDD +VK LR+L EPIC FGEGPA+RR RL++LLS+
Sbjct: 60 AKEKAALLEEFERRKKARLIHVSTDDGEVKSALRKLNEPICYFGEGPADRRLRLKELLSA 119
Query: 119 L 119
L
Sbjct: 120 L 120
>gi|194871924|ref|XP_001972931.1| GG15805 [Drosophila erecta]
gi|190654714|gb|EDV51957.1| GG15805 [Drosophila erecta]
Length = 552
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 97/168 (57%), Gaps = 49/168 (29%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKR-------------------------------- 28
MSDD+D+ Y+K+Q T+HYGSLEE ERKR
Sbjct: 1 MSDDDDIQYIKRQRTLHYGSLEESERKRQNAAASGAATTTTGTPASSGAGTTTTGTGGQL 60
Query: 29 --LAANKDVDDDQEKYTN------------VHTSNV---YMEIDDEMAKDKQALLQEFER 71
+ +++D ++ +K +N +N+ Y ++D EM +DK ALL+EFER
Sbjct: 61 EDIDSDEDYEESTKKASNSKQAAAPPPTAATLANNIDDDYFDLDMEMERDKVALLEEFER 120
Query: 72 RKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+K+AR +NVSTDD ++K NLRQL EPIC FGEGPAERR RL++LL+ L
Sbjct: 121 KKRARQINVSTDDTEIKSNLRQLNEPICYFGEGPAERRRRLKELLAGL 168
>gi|21355245|ref|NP_648990.1| U4-U6 small nuclear riboprotein factor 60K [Drosophila
melanogaster]
gi|7293972|gb|AAF49331.1| U4-U6 small nuclear riboprotein factor 60K [Drosophila
melanogaster]
gi|16769904|gb|AAL29171.1| SD09427p [Drosophila melanogaster]
gi|220946840|gb|ACL85963.1| CG6322-PA [synthetic construct]
Length = 553
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 50/169 (29%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKR-------------------------------- 28
MSDD+D+ Y+K+Q T+HYGSLEE ERKR
Sbjct: 1 MSDDDDIQYIKRQRTLHYGSLEESERKRQNAAASGAAATTTSGTTASSGAGTTTTGTGGQ 60
Query: 29 ---LAANKDVDDDQEKYTNVHTSNV---------------YMEIDDEMAKDKQALLQEFE 70
+ +++D ++ +K +N + Y +++ EM +DK ALL+EFE
Sbjct: 61 LEDIDSDEDYEESTKKTSNAKQAGAPPPTAATLANKIDDDYFDLEMEMERDKVALLEEFE 120
Query: 71 RRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
R+K+AR +NVSTDD ++K NLRQL EPIC FGEGPAERR RL++LL+ L
Sbjct: 121 RKKRARQINVSTDDTEIKSNLRQLNEPICYFGEGPAERRRRLKELLAGL 169
>gi|194750731|ref|XP_001957683.1| GF23908 [Drosophila ananassae]
gi|190624965|gb|EDV40489.1| GF23908 [Drosophila ananassae]
Length = 550
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 96/167 (57%), Gaps = 48/167 (28%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANK--------------------------- 33
MSDD+D+ Y+K+Q T+HYGSLEE ERKR A
Sbjct: 1 MSDDDDIQYIKRQRTLHYGSLEETERKRQNAAAAAASAATTTNTPASGTTTTIAGTGGQL 60
Query: 34 ---DVDDDQEKYTNVHTSNV------------------YMEIDDEMAKDKQALLQEFERR 72
D D+D E+ T +S+ Y +++ EM +DK ALL+EFER+
Sbjct: 61 EDIDSDEDYEENTKKISSSKAPAPPPTAATLANKIDDDYFDLEAEMERDKVALLEEFERK 120
Query: 73 KKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
K+AR +NVSTDD+++K NLRQL EPIC FGEGPAERR RL++LL++L
Sbjct: 121 KRARQINVSTDDSEIKSNLRQLNEPICYFGEGPAERRRRLKELLANL 167
>gi|195591096|ref|XP_002085279.1| GD12400 [Drosophila simulans]
gi|194197288|gb|EDX10864.1| GD12400 [Drosophila simulans]
Length = 553
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 50/169 (29%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKR-------------------------------- 28
MSDD+D+ Y+K+Q T+HYGSLEE ERKR
Sbjct: 1 MSDDDDIQYIKRQRTLHYGSLEESERKRQNAAASGAATTTTPGTPASSGTGATTTGTGGQ 60
Query: 29 ---LAANKDVDDDQEKYTNVHTSNV---------------YMEIDDEMAKDKQALLQEFE 70
+ +++D ++ +K +N + Y +++ EM +DK ALL+EFE
Sbjct: 61 LEDIDSDEDYEESTKKASNSKQAGAPPPTAATLANKIDDDYFDLEMEMERDKVALLEEFE 120
Query: 71 RRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
R+K+AR +NVSTDD ++K NLRQL EPIC FGEGPAERR RL++LL+ L
Sbjct: 121 RKKRARQINVSTDDTEIKSNLRQLNEPICYFGEGPAERRRRLKELLAGL 169
>gi|195328406|ref|XP_002030906.1| GM24327 [Drosophila sechellia]
gi|194119849|gb|EDW41892.1| GM24327 [Drosophila sechellia]
Length = 553
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 50/169 (29%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKR-------------------------------- 28
MSDD+D+ Y+K+Q T+HYGSLEE ERKR
Sbjct: 1 MSDDDDIQYIKRQRTLHYGSLEESERKRQNAAASGAATTTTPGTPASSGTGATTTGTGGQ 60
Query: 29 ---LAANKDVDDDQEKYTNVHTSNV---------------YMEIDDEMAKDKQALLQEFE 70
+ +++D ++ +K +N + Y +++ EM +DK ALL+EFE
Sbjct: 61 LEDIDSDEDYEESTKKASNSKQAGAPPPTAATLANKIDDDYFDLEMEMERDKVALLEEFE 120
Query: 71 RRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
R+K+AR +NVSTDD ++K NLRQL EPIC FGEGPAERR RL++LL+ L
Sbjct: 121 RKKRARQINVSTDDTEIKSNLRQLNEPICYFGEGPAERRRRLKELLAGL 169
>gi|195494811|ref|XP_002094999.1| GE22143 [Drosophila yakuba]
gi|194181100|gb|EDW94711.1| GE22143 [Drosophila yakuba]
Length = 552
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 94/169 (55%), Gaps = 51/169 (30%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANK--------------------------- 33
MSDD+D+ Y+K+Q T+HYGSLEE ERKR A
Sbjct: 1 MSDDDDIQYIKRQRTLHYGSLEESERKRQNAAASGAATTTTGTPASSGAGTTTTGTGGQL 60
Query: 34 ---DVDDDQEKYTNVHTSNV--------------------YMEIDDEMAKDKQALLQEFE 70
D D+D E+ T TSN Y +++ EM +DK ALL+EFE
Sbjct: 61 EDIDSDEDYEESTK-KTSNSKQAAAPPPTAATLANKIDDDYFDLEMEMERDKVALLEEFE 119
Query: 71 RRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
R+K+AR +NVSTDD ++K NLRQL EPIC FGEGPAERR RL++LL+ L
Sbjct: 120 RKKRARQINVSTDDTEIKSNLRQLNEPICYFGEGPAERRRRLKELLAGL 168
>gi|125979507|ref|XP_001353786.1| GA19511 [Drosophila pseudoobscura pseudoobscura]
gi|54640769|gb|EAL29520.1| GA19511 [Drosophila pseudoobscura pseudoobscura]
Length = 558
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 98/176 (55%), Gaps = 57/176 (32%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKR-------------------------------- 28
MSDD+D+ Y+K+Q T+HYGSLEE ERKR
Sbjct: 1 MSDDDDIQYIKRQRTIHYGSLEETERKRQNAGGASSAANAATAASATTPSQTSGAAAATP 60
Query: 29 -----------LAANKDVDDDQEKYTNVHTS-------NVYMEIDDE-------MAKDKQ 63
+ +++D ++ +K ++ S ++ +I+D+ M +DK
Sbjct: 61 AAPAPPAQLEDIESDEDYEEPSKKVSSTKASLPPPTAASLANKINDDYFDLETEMERDKV 120
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
ALL+EFER+K+AR +NVSTDD ++K NLRQL EPIC FGEGPAERR RL++LL++L
Sbjct: 121 ALLEEFERKKRARQINVSTDDAEIKSNLRQLNEPICFFGEGPAERRRRLKELLANL 176
>gi|443686049|gb|ELT89451.1| hypothetical protein CAPTEDRAFT_166413 [Capitella teleta]
Length = 336
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 88/129 (68%), Gaps = 12/129 (9%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANK---DVDDDQEKYTNVHTSNV------Y 51
MSD+E++ YV+K ++HYGS+EEQE+ R+A K + D K + N+
Sbjct: 1 MSDEEELHYVRK-TSLHYGSIEEQEKTRIAKGKYGESLGHDAIK-AGIRAGNINLAGGQS 58
Query: 52 MEID-DEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRS 110
M ID D+ +++K+ LL+EFERRK+ R ++VSTDD +VK+ LRQ GEPICLFGEGP +RR
Sbjct: 59 MYIDPDDSSQNKKDLLEEFERRKRVRQIHVSTDDGEVKIQLRQFGEPICLFGEGPQDRRE 118
Query: 111 RLRDLLSSL 119
RLR LL +
Sbjct: 119 RLRKLLGEM 127
>gi|443731474|gb|ELU16587.1| hypothetical protein CAPTEDRAFT_226300 [Capitella teleta]
Length = 410
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 88/129 (68%), Gaps = 12/129 (9%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANK---DVDDDQEKYTNVHTSNV------Y 51
MSD+E++ YV+K ++HYGS+EEQE+ R+A K + D K + N+
Sbjct: 1 MSDEEELHYVRK-TSLHYGSIEEQEKTRIAKGKYGESLGHDAIK-AGIRAGNINLAGGQS 58
Query: 52 MEID-DEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRS 110
M ID D+ +++K+ LL+EFERRK+ R ++VSTDD +VK+ LRQ GEPICLFGEGP +RR
Sbjct: 59 MYIDPDDSSQNKKDLLEEFERRKRVRQIHVSTDDGEVKIQLRQFGEPICLFGEGPQDRRE 118
Query: 111 RLRDLLSSL 119
RLR LL +
Sbjct: 119 RLRKLLGEM 127
>gi|20302751|gb|AAM18877.1|AF391290_3 unknown [Branchiostoma floridae]
Length = 509
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 88/129 (68%), Gaps = 11/129 (8%)
Query: 1 MSDDEDV-IYVKKQNTVHYGSLEEQERKRLA---ANKDVDDDQEKYTNVHTSNV------ 50
MSDDEDV + KK VH+GSLEE ER+RLA + D + + + N+
Sbjct: 1 MSDDEDVQLPSKKAKIVHFGSLEEVERQRLAKQEGQGSLGSDAVQ-AGILSGNINISEGE 59
Query: 51 YMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRS 110
++++ ++ ++ +L+EFERRK+AR ++VSTDD++VK LRQLGEPICLFGEGPA+RR
Sbjct: 60 TFDLEEHQSERQKEVLEEFERRKRARQIHVSTDDSEVKAQLRQLGEPICLFGEGPADRRE 119
Query: 111 RLRDLLSSL 119
RLR +L+ +
Sbjct: 120 RLRQILAKI 128
>gi|260791637|ref|XP_002590835.1| hypothetical protein BRAFLDRAFT_125722 [Branchiostoma floridae]
gi|229276032|gb|EEN46846.1| hypothetical protein BRAFLDRAFT_125722 [Branchiostoma floridae]
Length = 448
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 88/129 (68%), Gaps = 11/129 (8%)
Query: 1 MSDDEDV-IYVKKQNTVHYGSLEEQERKRLA---ANKDVDDDQEKYTNVHTSNV------ 50
MSDDEDV + KK VH+GSLEE ER+RLA + D + + + N+
Sbjct: 1 MSDDEDVQLPSKKAKIVHFGSLEEVERQRLAKQEGQGSLGSDAVQ-AGILSGNINISEGE 59
Query: 51 YMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRS 110
++++ ++ ++ +L+EFERRK+AR ++VSTDD++VK LRQLGEPICLFGEGPA+RR
Sbjct: 60 TFDLEEHQSERQKEVLEEFERRKRARQIHVSTDDSEVKAQLRQLGEPICLFGEGPADRRE 119
Query: 111 RLRDLLSSL 119
RLR +L+ +
Sbjct: 120 RLRQILAKI 128
>gi|62089180|dbj|BAD93034.1| PRPF4 protein variant [Homo sapiens]
Length = 537
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 61/121 (50%), Positives = 83/121 (68%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAAN------KDVDDDQEKYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA KD + N++ TS EI++
Sbjct: 33 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEE 92
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 93 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 152
Query: 117 S 117
S
Sbjct: 153 S 153
>gi|349732206|ref|NP_001231855.1| U4/U6 small nuclear ribonucleoprotein Prp4 isoform 2 [Homo sapiens]
gi|332832669|ref|XP_520198.3| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Pan
troglodytes]
gi|397526363|ref|XP_003833097.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Pan
paniscus]
gi|426362736|ref|XP_004048511.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Gorilla
gorilla gorilla]
gi|13938549|gb|AAH07424.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [Homo sapiens]
gi|45861374|gb|AAS78572.1| 60 kDa U4/U6 snRNP-specific spliceosomal protein [Homo sapiens]
gi|119607769|gb|EAW87363.1| PRP4 pre-mRNA processing factor 4 homolog (yeast), isoform CRA_b
[Homo sapiens]
gi|307685355|dbj|BAJ20608.1| PRP4 pre-mRNA processing factor 4 homolog [synthetic construct]
gi|410256154|gb|JAA16044.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410256156|gb|JAA16045.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410256158|gb|JAA16046.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410256160|gb|JAA16047.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410256162|gb|JAA16048.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410330629|gb|JAA34261.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
Length = 521
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/121 (50%), Positives = 83/121 (68%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAAN------KDVDDDQEKYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA KD + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|48146327|emb|CAG33386.1| PRPF4 [Homo sapiens]
Length = 521
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/121 (50%), Positives = 83/121 (68%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAAN------KDVDDDQEKYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA KD + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|189053699|dbj|BAG35951.1| unnamed protein product [Homo sapiens]
Length = 522
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/121 (50%), Positives = 83/121 (68%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAAN------KDVDDDQEKYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA KD + N++ TS EI++
Sbjct: 18 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEE 77
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 78 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 137
Query: 117 S 117
S
Sbjct: 138 S 138
>gi|24431950|ref|NP_004688.2| U4/U6 small nuclear ribonucleoprotein Prp4 isoform 1 [Homo sapiens]
gi|20514971|sp|O43172.2|PRP4_HUMAN RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp4; AltName:
Full=PRP4 homolog; Short=hPrp4; AltName: Full=U4/U6
snRNP 60 kDa protein; AltName: Full=WD splicing factor
Prp4
gi|16306787|gb|AAH01588.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [Homo sapiens]
gi|119607768|gb|EAW87362.1| PRP4 pre-mRNA processing factor 4 homolog (yeast), isoform CRA_a
[Homo sapiens]
gi|157928356|gb|ABW03474.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [synthetic
construct]
gi|157928994|gb|ABW03782.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [synthetic
construct]
gi|410206996|gb|JAA00717.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410206998|gb|JAA00718.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410207000|gb|JAA00719.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410287674|gb|JAA22437.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
Length = 522
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/121 (50%), Positives = 83/121 (68%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAAN------KDVDDDQEKYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA KD + N++ TS EI++
Sbjct: 18 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEE 77
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 78 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 137
Query: 117 S 117
S
Sbjct: 138 S 138
>gi|391337468|ref|XP_003743089.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Metaseiulus
occidentalis]
Length = 512
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 81/125 (64%), Gaps = 8/125 (6%)
Query: 1 MSDDEDVI-YVKKQNTVHYGSLEEQERKR------LAANKDVDDDQEKYTNVHTSNVYME 53
MSD ED I YVK+ TVHYG LEEQER R + D + S +M
Sbjct: 1 MSDSEDEIQYVKRARTVHYGGLEEQERLRQESRGDSTGSDSDSGDDSPGPSGKGSAEFMA 60
Query: 54 IDDE-MAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRL 112
+++E M ++K+ LL E ER+K+AR +NV TDD QV++ LR +G+PICLFGEGPA+RR RL
Sbjct: 61 LEEEKMTREKKLLLDELERKKRARKLNVPTDDGQVRMILRDIGQPICLFGEGPADRRERL 120
Query: 113 RDLLS 117
R +L+
Sbjct: 121 RSVLA 125
>gi|395824375|ref|XP_003785441.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Otolemur
garnettii]
Length = 648
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 174 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 233
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 234 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 293
Query: 117 S 117
S
Sbjct: 294 S 294
>gi|26354947|dbj|BAC41100.1| unnamed protein product [Mus musculus]
Length = 521
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|344272040|ref|XP_003407844.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Loxodonta
africana]
Length = 523
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 19 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 78
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 79 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 138
Query: 117 S 117
S
Sbjct: 139 S 139
>gi|73971978|ref|XP_532038.2| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Canis lupus
familiaris]
Length = 521
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|402896618|ref|XP_003911388.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Papio
anubis]
Length = 521
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|301760056|ref|XP_002915829.1| PREDICTED: u4/U6 small nuclear ribonucleoprotein Prp4-like
[Ailuropoda melanoleuca]
Length = 521
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|291382779|ref|XP_002708169.1| PREDICTED: PRP4 pre-mRNA processing factor 4 homolog [Oryctolagus
cuniculus]
Length = 521
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|2708305|gb|AAC51925.1| U4/U6 small nuclear ribonucleoprotein hPrp4 [Homo sapiens]
Length = 522
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/121 (50%), Positives = 83/121 (68%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAAN------KDVDDDQEKYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA KD + N++ TS EI++
Sbjct: 18 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEE 77
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 78 RISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 137
Query: 117 S 117
S
Sbjct: 138 S 138
>gi|157820821|ref|NP_001100129.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Rattus norvegicus]
gi|149059625|gb|EDM10563.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [Rattus
norvegicus]
Length = 521
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|197098526|ref|NP_001127122.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Pongo abelii]
gi|75070325|sp|Q5NVD0.1|PRP4_PONAB RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp4; AltName:
Full=U4/U6 snRNP 60 kDa protein; AltName: Full=WD
splicing factor Prp4
gi|56403896|emb|CAI29733.1| hypothetical protein [Pongo abelii]
Length = 521
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|348556065|ref|XP_003463843.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like [Cavia
porcellus]
Length = 521
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|387763274|ref|NP_001248498.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
gi|380817840|gb|AFE80794.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
gi|380817842|gb|AFE80795.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
gi|380817844|gb|AFE80796.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
gi|380817846|gb|AFE80797.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
gi|380817848|gb|AFE80798.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
gi|383422727|gb|AFH34577.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
gi|383422729|gb|AFH34578.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
gi|384950230|gb|AFI38720.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
gi|384950232|gb|AFI38721.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
gi|384950234|gb|AFI38722.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
gi|384950236|gb|AFI38723.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
gi|384950238|gb|AFI38724.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Macaca mulatta]
Length = 521
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|332229795|ref|XP_003264072.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Nomascus
leucogenys]
gi|338720455|ref|XP_001488913.3| PREDICTED: u4/U6 small nuclear ribonucleoprotein Prp4 [Equus
caballus]
gi|350579520|ref|XP_003353667.2| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like [Sus
scrofa]
gi|390458248|ref|XP_002743259.2| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Callithrix
jacchus]
gi|410978877|ref|XP_003995814.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Felis catus]
Length = 521
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|77735613|ref|NP_001029502.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Bos taurus]
gi|122142976|sp|Q3MHE2.1|PRP4_BOVIN RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp4; AltName:
Full=U4/U6 snRNP 60 kDa protein; AltName: Full=WD
splicing factor Prp4
gi|75948223|gb|AAI05271.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [Bos taurus]
gi|296484345|tpg|DAA26460.1| TPA: U4/U6 small nuclear ribonucleoprotein Prp4 [Bos taurus]
Length = 521
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGLLGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|426219679|ref|XP_004004046.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Ovis aries]
Length = 521
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGLLGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|55925589|ref|NP_081573.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Mus musculus]
gi|81917168|sp|Q9DAW6.1|PRP4_MOUSE RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp4; AltName:
Full=U4/U6 snRNP 60 kDa protein; AltName: Full=WD
splicing factor Prp4
gi|12838037|dbj|BAB24055.1| unnamed protein product [Mus musculus]
gi|26354699|dbj|BAC40976.1| unnamed protein product [Mus musculus]
gi|74143768|dbj|BAE41214.1| unnamed protein product [Mus musculus]
gi|74185002|dbj|BAE39112.1| unnamed protein product [Mus musculus]
gi|74191000|dbj|BAE39342.1| unnamed protein product [Mus musculus]
gi|76779866|gb|AAI06090.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [Mus musculus]
gi|116138540|gb|AAI25532.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [Mus musculus]
gi|116138897|gb|AAI25530.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [Mus musculus]
gi|148699201|gb|EDL31148.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [Mus musculus]
Length = 521
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|354482649|ref|XP_003503510.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Cricetulus
griseus]
gi|344250557|gb|EGW06661.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Cricetulus griseus]
Length = 521
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|281339932|gb|EFB15516.1| hypothetical protein PANDA_003854 [Ailuropoda melanoleuca]
Length = 513
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 9 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 68
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 69 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 128
Query: 117 S 117
S
Sbjct: 129 S 129
>gi|355567514|gb|EHH23855.1| U4/U6 snRNP 60 kDa protein [Macaca mulatta]
gi|355753097|gb|EHH57143.1| U4/U6 snRNP 60 kDa protein [Macaca fascicularis]
Length = 522
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 18 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 77
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 78 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 137
Query: 117 S 117
S
Sbjct: 138 S 138
>gi|2653736|gb|AAB87640.1| U4/U6 snRNP 60 kDa protein [Homo sapiens]
Length = 521
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 61/121 (50%), Positives = 83/121 (68%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAAN------KDVDDDQEKYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA KD + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + LL EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RL+++L
Sbjct: 77 HISERQAELLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLKNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|432091578|gb|ELK24603.1| U4/U6 small nuclear ribonucleoprotein Prp4, partial [Myotis
davidii]
Length = 533
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 59/121 (48%), Positives = 83/121 (68%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 29 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 88
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAE R RLR++L
Sbjct: 89 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAESRERLRNIL 148
Query: 117 S 117
S
Sbjct: 149 S 149
>gi|432950800|ref|XP_004084617.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like [Oryzias
latipes]
Length = 505
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 85/121 (70%), Gaps = 4/121 (3%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRL---AANKDVDDDQEKYTNVH-TSNVYMEIDD 56
MSD+ED + V K++ V YGSLEE+ER+RL A D K N++ +S +EI+D
Sbjct: 1 MSDEEDAVPVAKKSRVFYGSLEEKERERLSLQATGSDAVRAGIKAGNINISSGETLEIED 60
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ +Q +L EFERR++AR + VSTDD +VK LR LGEPI LFGEGPA+RR RLR +L
Sbjct: 61 RVSERQQEVLAEFERRRRARQITVSTDDAEVKAGLRALGEPITLFGEGPADRRERLRSVL 120
Query: 117 S 117
S
Sbjct: 121 S 121
>gi|126297568|ref|XP_001362345.1| PREDICTED: u4/U6 small nuclear ribonucleoprotein Prp4 isoform 1
[Monodelphis domestica]
Length = 523
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 81/115 (70%), Gaps = 7/115 (6%)
Query: 10 VKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDDEMAKDK 62
V K+ ++YGSLEE+E++RLA + +E + N++ TS EI++ +++ +
Sbjct: 25 VVKKPHIYYGSLEEKEKERLARGESGMLGKEGIKAGIEAGNINITSGEVFEIEEHISERQ 84
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++LS
Sbjct: 85 AEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILS 139
>gi|363740293|ref|XP_415544.3| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Gallus
gallus]
Length = 537
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/114 (50%), Positives = 78/114 (68%), Gaps = 9/114 (7%)
Query: 12 KQNTVHYGSLEEQERKRLAANKDVDDDQEKYT--------NVHTSNVYMEIDDEMAKDKQ 63
K+ + YGSLEE+ER+RLA + +E N+ + V+ E++D M++ +
Sbjct: 41 KRAPIFYGSLEEKERERLAKGESGLLGKEGMKAALEAGNINISSGEVF-ELEDHMSERQA 99
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++LS
Sbjct: 100 EVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILS 153
>gi|395506067|ref|XP_003757357.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Sarcophilus
harrisii]
Length = 523
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 81/115 (70%), Gaps = 7/115 (6%)
Query: 10 VKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDDEMAKDK 62
V K+ ++YGSLEE+E++RLA + +E + N++ TS EI++ +++ +
Sbjct: 25 VVKKPHIYYGSLEEKEKERLARGESGMLGKEGIKAGIEAGNINITSGEVFEIEEHISERQ 84
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++LS
Sbjct: 85 AEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILS 139
>gi|126297571|ref|XP_001362422.1| PREDICTED: u4/U6 small nuclear ribonucleoprotein Prp4 isoform 2
[Monodelphis domestica]
Length = 524
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 57/115 (49%), Positives = 81/115 (70%), Gaps = 7/115 (6%)
Query: 10 VKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDDEMAKDK 62
V K+ ++YGSLEE+E++RLA + +E + N++ TS EI++ +++ +
Sbjct: 26 VVKKPHIYYGSLEEKEKERLARGESGMLGKEGIKAGIEAGNINITSGEVFEIEEHISERQ 85
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++LS
Sbjct: 86 AEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILS 140
>gi|444730208|gb|ELW70598.1| U4/U6 small nuclear ribonucleoprotein Prp4, partial [Tupaia
chinensis]
Length = 362
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 59/121 (48%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V + K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 7 DDLVAPLVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 66
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 67 HISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 126
Query: 117 S 117
S
Sbjct: 127 S 127
>gi|327290124|ref|XP_003229774.1| PREDICTED: LOW QUALITY PROTEIN: u4/U6 small nuclear
ribonucleoprotein Prp4-like [Anolis carolinensis]
Length = 549
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 56/113 (49%), Positives = 77/113 (68%), Gaps = 7/113 (6%)
Query: 12 KQNTVHYGSLEEQERKRLAAN------KDVDDDQEKYTNVH-TSNVYMEIDDEMAKDKQA 64
K+ + YGSLEE+ER+RL KD + N++ TS +++D +++ +
Sbjct: 53 KKGPIFYGSLEEKERERLLKGESGMLGKDAVKAAIEAGNINVTSGEVFDLEDHISERQAE 112
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++LS
Sbjct: 113 VLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILS 165
>gi|156390600|ref|XP_001635358.1| predicted protein [Nematostella vectensis]
gi|156222451|gb|EDO43295.1| predicted protein [Nematostella vectensis]
Length = 513
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 82/137 (59%), Gaps = 19/137 (13%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEK-----------YTNVHTSN 49
MSDDED K+Q +H+GSLEE E+ RLA+ D +E + + N
Sbjct: 1 MSDDEDAPQAKRQR-IHFGSLEEVEKNRLASQTTGKDGKEMDEVDRIISNAIMEGIQSGN 59
Query: 50 V------YMEIDDEMAKDK-QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFG 102
+ Y+E+ ++ ++ Q LL++FERRKKAR + V TD+ V+ LR+LGEPI LFG
Sbjct: 60 INISEGEYLELSEDTTSERHQELLEQFERRKKARMITVPTDNAAVQARLRELGEPITLFG 119
Query: 103 EGPAERRSRLRDLLSSL 119
EGP ERR RLR +L+ L
Sbjct: 120 EGPPERRDRLRKMLAEL 136
>gi|45360769|ref|NP_989058.1| PRP4 pre-mRNA processing factor 4 homolog [Xenopus (Silurana)
tropicalis]
gi|38174058|gb|AAH61324.1| PRP4 pre-mRNA processing factor 4 homolog [Xenopus (Silurana)
tropicalis]
Length = 507
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 56/123 (45%), Positives = 80/123 (65%), Gaps = 7/123 (5%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTNVHTSNVYM------EI 54
MSDDE VK+ + YGSL ++ER+RLA + + N+ + ++
Sbjct: 1 MSDDEGPPVVKRSR-IFYGSLADKERERLAKGEAPMGRSAVRAGIDAGNINISGGESFDL 59
Query: 55 DDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRD 114
++ +++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR+
Sbjct: 60 EEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRN 119
Query: 115 LLS 117
+LS
Sbjct: 120 VLS 122
>gi|326930188|ref|XP_003211233.1| PREDICTED: u4/U6 small nuclear ribonucleoprotein Prp4-like
[Meleagris gallopavo]
Length = 537
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 55/114 (48%), Positives = 77/114 (67%), Gaps = 9/114 (7%)
Query: 12 KQNTVHYGSLEEQERKRLAANKDVDDDQEKYT--------NVHTSNVYMEIDDEMAKDKQ 63
K+ + YG LEE+ER+RLA + +E N+ + V+ +++D M++ +
Sbjct: 41 KRAPIFYGXLEEKERERLAKGESGLLGKEGMKAALEAGNINISSGEVF-DLEDHMSERQA 99
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++LS
Sbjct: 100 EVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILS 153
>gi|213513596|ref|NP_001133336.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Salmo salar]
gi|209150909|gb|ACI33049.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Salmo salar]
Length = 506
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/123 (45%), Positives = 76/123 (61%), Gaps = 7/123 (5%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTNVHTSNV------YMEI 54
MSDDE+ VKK + YGSLEE+ER+RL + N+ +E+
Sbjct: 1 MSDDEEAPLVKKTR-IFYGSLEEKERERLGREASGSGKDSVKAGIEAGNINISSGESLEL 59
Query: 55 DDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRD 114
++ + + + +L +FERRK+AR + VSTDD +VK LR L EPI LFGEGPAERR RLR+
Sbjct: 60 EERVTERQSEVLADFERRKRARQITVSTDDAEVKACLRALREPITLFGEGPAERRERLRN 119
Query: 115 LLS 117
+LS
Sbjct: 120 ILS 122
>gi|449270018|gb|EMC80745.1| U4/U6 small nuclear ribonucleoprotein Prp4, partial [Columba livia]
Length = 513
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/114 (48%), Positives = 78/114 (68%), Gaps = 9/114 (7%)
Query: 12 KQNTVHYGSLEEQERKRLAANKDVDDDQEKYT--------NVHTSNVYMEIDDEMAKDKQ 63
K+ + YGSLEE+E++RLA + +E N+ + V+ +++D M++ +
Sbjct: 17 KRAPIFYGSLEEKEKERLAKGESGLLGKEGMKAAMEAGNINISSGEVF-DLEDHMSERQA 75
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++LS
Sbjct: 76 EVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILS 129
>gi|126331160|ref|XP_001363061.1| PREDICTED: u4/U6 small nuclear ribonucleoprotein Prp4-like
[Monodelphis domestica]
Length = 523
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/115 (48%), Positives = 80/115 (69%), Gaps = 7/115 (6%)
Query: 10 VKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDDEMAKDK 62
V K+ ++YGSLEE+E++RLA + +E + N++ TS EI++ +++ +
Sbjct: 25 VVKKPHIYYGSLEEKEKERLARGESGLLGKEGIKAGIEAGNINITSGEVFEIEEHISERQ 84
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+L EFERRK+AR +NVSTDD++VK LR L EPI LFGEGPAERR RLR++LS
Sbjct: 85 AEVLAEFERRKRARQINVSTDDSEVKACLRALEEPITLFGEGPAERRERLRNILS 139
>gi|195442412|ref|XP_002068952.1| GK18046 [Drosophila willistoni]
gi|194165037|gb|EDW79938.1| GK18046 [Drosophila willistoni]
Length = 583
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 59/69 (85%)
Query: 51 YMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRS 110
Y +++ EM +D ALL+EFER+K+AR +NVSTDD+++K NLRQL EPIC FGEGPAERR
Sbjct: 130 YFDLEAEMERDTVALLEEFERKKRARQINVSTDDSEIKNNLRQLNEPICYFGEGPAERRR 189
Query: 111 RLRDLLSSL 119
RL++LL+SL
Sbjct: 190 RLKELLASL 198
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 25/28 (89%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKR 28
MSDD+D+ YVK+Q T+HYGSLEE ERKR
Sbjct: 1 MSDDDDIQYVKRQRTLHYGSLEEAERKR 28
>gi|41054303|ref|NP_956049.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Danio rerio]
gi|292614242|ref|XP_002662201.1| PREDICTED: u4/U6 small nuclear ribonucleoprotein Prp4-like [Danio
rerio]
gi|34784477|gb|AAH56720.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [Danio rerio]
gi|158254342|gb|AAI54323.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [Danio rerio]
Length = 507
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 59/124 (47%), Positives = 82/124 (66%), Gaps = 9/124 (7%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLA--ANKDVDDDQEK------YTNVHTSNVYMEID 55
DED V K++ + YGSLEE+E++RL+ D K + N+ +S ME++
Sbjct: 3 DEDEAPVVKRSRIFYGSLEEKEKERLSREGTSTTAKDAVKAGIEAGHINI-SSGESMEME 61
Query: 56 DEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
+ +++ + +L EFERRK+AR + VSTDD +VK LR LGEPI LFGEGPAERR RLR++
Sbjct: 62 ERVSERQAEVLAEFERRKRARQITVSTDDVEVKACLRALGEPITLFGEGPAERRERLRNV 121
Query: 116 LSSL 119
LS L
Sbjct: 122 LSVL 125
>gi|72110055|ref|XP_795434.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4
[Strongylocentrotus purpuratus]
Length = 502
Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/116 (43%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQ 63
+ED + K+ VHYG+LEE +K ++ + N+ + ++++ +++ ++
Sbjct: 3 EEDGLSALKKPRVHYGTLEEHLKKTGVSDATGIVLEAGNINMSAGETF-DMEEHISERRK 61
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
LL EFERR+KAR + VSTDD++VK LR+ GEPICLF EGPAERR RLR LL++L
Sbjct: 62 ELLAEFERRRKARQITVSTDDSEVKAQLRKYGEPICLFSEGPAERRERLRHLLAAL 117
>gi|348532267|ref|XP_003453628.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like
[Oreochromis niloticus]
Length = 510
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/126 (49%), Positives = 85/126 (67%), Gaps = 9/126 (7%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAAN--------KDVDDDQEKYTNVH-TSNVY 51
MSD+EDV K++ V YGSLEE+ER+RL+AN D + N++ +S
Sbjct: 1 MSDEEDVAPAVKKSRVFYGSLEEKERERLSANVASSTATGSDAVRAGIEAGNINISSGET 60
Query: 52 MEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSR 111
+EI++ +++ +Q L EFERR++AR + VSTDD +VK LR LGEPI LFGEGPA+RR R
Sbjct: 61 LEIEERVSERQQEALAEFERRRRARQITVSTDDAEVKAGLRALGEPITLFGEGPADRRER 120
Query: 112 LRDLLS 117
LR +LS
Sbjct: 121 LRSVLS 126
>gi|148232120|ref|NP_001087652.1| PRP4 pre-mRNA processing factor 4 homolog [Xenopus laevis]
gi|51703478|gb|AAH81044.1| MGC81780 protein [Xenopus laevis]
Length = 483
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 7/123 (5%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTNVHTSNVYM------EI 54
MSDDE VK+ + YGSL ++E++RLA + + N+ + ++
Sbjct: 1 MSDDEGPPVVKRSR-IFYGSLADKEKERLAKGEAPLGRTAVRAGIDAGNINISGGESFDL 59
Query: 55 DDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRD 114
++ +++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR+
Sbjct: 60 EEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRN 119
Query: 115 LLS 117
+LS
Sbjct: 120 VLS 122
>gi|224073009|ref|XP_002191402.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Taeniopygia
guttata]
Length = 491
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 52/104 (50%), Positives = 71/104 (68%), Gaps = 7/104 (6%)
Query: 21 LEEQERKRLAAN------KDVDDDQEKYTNVH-TSNVYMEIDDEMAKDKQALLQEFERRK 73
LEE+ER+RLA K+ + N++ +S +++D M++ + +L EFERRK
Sbjct: 4 LEEKERERLAKGETGLLAKEAMKAAMEAGNINISSGEVFDLEDHMSERQAEVLAEFERRK 63
Query: 74 KARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+AR +NVSTDD +VK LR LGEPI LFGEGPAERR RLR++LS
Sbjct: 64 RARQINVSTDDCEVKACLRALGEPITLFGEGPAERRERLRNILS 107
>gi|47216991|emb|CAG04933.1| unnamed protein product [Tetraodon nigroviridis]
Length = 506
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 5/122 (4%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYT----NVH-TSNVYMEID 55
MSDDED K++ V YGSLEE+ER+RL++ + K N++ +S +E++
Sbjct: 1 MSDDEDFAPAVKRSRVFYGSLEEKERERLSSEATGTSNAVKVGIEAGNINISSGETLELE 60
Query: 56 DEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
D +++ +Q L FERR++AR + VSTDD +VK LR LGEPI LFGEGPA+RR RLR++
Sbjct: 61 DRVSERQQEALAAFERRRRARQITVSTDDAEVKAGLRALGEPITLFGEGPADRRERLRNV 120
Query: 116 LS 117
LS
Sbjct: 121 LS 122
>gi|410904337|ref|XP_003965648.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like
[Takifugu rubripes]
Length = 509
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 57/125 (45%), Positives = 79/125 (63%), Gaps = 8/125 (6%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTNVH--------TSNVYM 52
MSDDED + V K++ + YGSLEE+ER+RL + V +S +
Sbjct: 1 MSDDEDFVPVVKRSRLFYGSLEEKERERLRSEATSGSTGSSAVKVGIEAGHINISSGETL 60
Query: 53 EIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRL 112
E+++ +++ +Q L FERR++AR + VSTDD +VK LR LGEPI LFGEGPA+RR RL
Sbjct: 61 ELEERVSERQQEALAAFERRRRARQITVSTDDAEVKAGLRALGEPITLFGEGPADRRERL 120
Query: 113 RDLLS 117
R +LS
Sbjct: 121 RTVLS 125
>gi|355713773|gb|AES04784.1| PRP4 pre-mRNA processing factor 4-like protein [Mustela putorius
furo]
Length = 436
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/53 (73%), Positives = 46/53 (86%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++LS
Sbjct: 1 VLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILS 53
>gi|405957659|gb|EKC23856.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Crassostrea gigas]
Length = 521
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 9/112 (8%)
Query: 3 DDEDVIYVKKQNTVHYGSLEEQERKRLAANKD---VDDDQEKY------TNVHTSNVYME 53
DDE++ + + + YGSLEE+E+ RLAAN + D K N+ Y
Sbjct: 6 DDEELNVPQVKRAIVYGSLEEKEKLRLAANSSSGSLASDAIKAGKAAGNINITEGGSYDI 65
Query: 54 IDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGP 105
+ + + ++ L+ E+RKKAR + VSTDD +VK NLRQLGEPICLFGEGP
Sbjct: 66 AERDPNEGQEELIATLEKRKKARQIQVSTDDFEVKANLRQLGEPICLFGEGP 117
>gi|195999906|ref|XP_002109821.1| hypothetical protein TRIADDRAFT_21736 [Trichoplax adhaerens]
gi|190587945|gb|EDV27987.1| hypothetical protein TRIADDRAFT_21736 [Trichoplax adhaerens]
Length = 484
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/58 (67%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
Query: 61 DKQA-LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
D+Q LL EFERRKK R V V TDD++VK LR+LGEPICLFGEGP+ERR+RLR++ +
Sbjct: 37 DRQTELLAEFERRKKVRSVVVPTDDSEVKARLRELGEPICLFGEGPSERRNRLREIYA 94
>gi|212541274|ref|XP_002150792.1| pre-mRNA splicing factor, putative [Talaromyces marneffei ATCC
18224]
gi|210068091|gb|EEA22183.1| pre-mRNA splicing factor, putative [Talaromyces marneffei ATCC
18224]
Length = 526
Score = 81.3 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 49/57 (85%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
ALL +FER+++A + V TDDN+V+L LR+LGEPI LFGEGPA+RR RLR++L++LQ
Sbjct: 47 ALLSQFERKRRAAAIIVPTDDNRVRLRLRELGEPITLFGEGPADRRDRLREILTTLQ 103
>gi|349805943|gb|AEQ18444.1| putative prp4 pre-mrna processing factor 4 [Hymenochirus curtipes]
Length = 206
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 47/58 (81%)
Query: 52 MEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERR 109
+ID+ +++ + +L EFERRK+AR +NVSTDD++VK LR LGEPI LFGEGPAERR
Sbjct: 10 FDIDEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 67
>gi|2853277|gb|AAC02261.1| WD splicing factor Hprp4p [Homo sapiens]
Length = 520
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/121 (42%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAAN------KDVDDDQEKYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA KD + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
A D+Q + DD++VK LR LGEPI LFGEGPAERR RLR++L
Sbjct: 77 ISASDRQKYWLSLREGSEPGRSMFPPDDSEVKACLRALGEPITLFGEGPAERRERLRNIL 136
Query: 117 S 117
S
Sbjct: 137 S 137
>gi|221119144|ref|XP_002158592.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like [Hydra
magnipapillata]
Length = 559
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%)
Query: 56 DEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
D ++ +Q L+ EFE+RK R + VSTDD VK LR+LG PICLFGEGPA+RR RL+DL
Sbjct: 111 DVSSERQQELMAEFEKRKMLRSITVSTDDYIVKAKLRELGHPICLFGEGPAQRRDRLKDL 170
Query: 116 L 116
L
Sbjct: 171 L 171
>gi|313244638|emb|CBY15378.1| unnamed protein product [Oikopleura dioica]
Length = 518
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
Q+LL +FE+RK+AR + VSTDD +VK LR LGEPI LFGE PA+RRSRLR +LS
Sbjct: 51 QSLLDDFEKRKRARKMAVSTDDKEVKATLRALGEPITLFGEDPADRRSRLRIILS 105
>gi|242799225|ref|XP_002483334.1| pre-mRNA splicing factor, putative [Talaromyces stipitatus ATCC
10500]
gi|218716679|gb|EED16100.1| pre-mRNA splicing factor, putative [Talaromyces stipitatus ATCC
10500]
Length = 531
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 47/57 (82%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
ALL +FER+++A + V TDD +V+L LR+LGEPI LFGEGP +RR RLR+LL++LQ
Sbjct: 47 ALLSQFERKRRAAAIVVPTDDTRVRLRLRELGEPITLFGEGPGDRRDRLRELLTTLQ 103
>gi|159123728|gb|EDP48847.1| pre-mRNA splicing factor, putative [Aspergillus fumigatus A1163]
Length = 537
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 61/93 (65%), Gaps = 8/93 (8%)
Query: 35 VDDDQEKYTNVHTSNVYMEIDDEM--------AKDKQALLQEFERRKKARHVNVSTDDNQ 86
V++ ++ + +NV ++ D ++ A+ A+L +FER+++A + V TDDN+
Sbjct: 10 VEESEDTEMGIDLANVPVDRDYDIPSAAAGIPAERASAILSQFERKRRAAAMAVPTDDNR 69
Query: 87 VKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
V+ LR+LGEPI LFGEGP +RR RLR+LL+ L
Sbjct: 70 VRARLRELGEPITLFGEGPVDRRDRLRELLTDL 102
>gi|146324741|ref|XP_747266.2| pre-mRNA splicing factor [Aspergillus fumigatus Af293]
gi|129556131|gb|EAL85228.2| pre-mRNA splicing factor, putative [Aspergillus fumigatus Af293]
Length = 536
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 61/93 (65%), Gaps = 8/93 (8%)
Query: 35 VDDDQEKYTNVHTSNVYMEIDDEM--------AKDKQALLQEFERRKKARHVNVSTDDNQ 86
V++ ++ + +NV ++ D ++ A+ A+L +FER+++A + V TDDN+
Sbjct: 9 VEESEDTEMGIDLANVPVDRDYDIPSAAAGIPAERASAILSQFERKRRAAAMAVPTDDNR 68
Query: 87 VKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
V+ LR+LGEPI LFGEGP +RR RLR+LL+ L
Sbjct: 69 VRARLRELGEPITLFGEGPVDRRDRLRELLTDL 101
>gi|256087108|ref|XP_002579719.1| hypothetical protein [Schistosoma mansoni]
gi|353231140|emb|CCD77558.1| hypothetical protein Smp_169060 [Schistosoma mansoni]
Length = 875
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 47/62 (75%)
Query: 56 DEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
DE+ K+ Q L + E RKKAR + VST+D++V+ LRQLGEP+CLFGE A+RR RLR +
Sbjct: 411 DEVDKNAQEALNQLELRKKARLIQVSTEDSEVRAYLRQLGEPVCLFGEDGADRRERLRMI 470
Query: 116 LS 117
L+
Sbjct: 471 LA 472
>gi|119484210|ref|XP_001262008.1| pre-mRNA splicing factor, putative [Neosartorya fischeri NRRL 181]
gi|119410164|gb|EAW20111.1| pre-mRNA splicing factor, putative [Neosartorya fischeri NRRL 181]
Length = 536
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 59 AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
A+ A+L +FER+++A + V TDDN+V+ LR+LGEPI LFGEGP +RR RLR+LL+
Sbjct: 41 AERASAILSQFERKRRAAAMAVPTDDNRVRARLRELGEPITLFGEGPVDRRDRLRELLTD 100
Query: 119 L 119
L
Sbjct: 101 L 101
>gi|358372727|dbj|GAA89329.1| pre-mRNA splicing factor [Aspergillus kawachii IFO 4308]
Length = 527
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 59 AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
A+ A+L +FER+++A + V TDD +V+ LR+LGEPI LFGEGPA+RR RLR+LL+
Sbjct: 42 AERASAILSQFERKRRAAAMAVPTDDGRVRARLRELGEPITLFGEGPADRRDRLRELLTD 101
Query: 119 L 119
L
Sbjct: 102 L 102
>gi|67522022|ref|XP_659072.1| hypothetical protein AN1468.2 [Aspergillus nidulans FGSC A4]
gi|40745442|gb|EAA64598.1| hypothetical protein AN1468.2 [Aspergillus nidulans FGSC A4]
gi|259486783|tpe|CBF84921.1| TPA: pre-mRNA splicing factor, putative (AFU_orthologue;
AFUA_8G04590) [Aspergillus nidulans FGSC A4]
Length = 521
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 47/61 (77%)
Query: 59 AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
A+ A++ +FER+++A + V TDD +V+ LR+LGEPI LFGEGPA+RR RLR+LL+
Sbjct: 42 AEKASAIISQFERKRRAAAMAVPTDDTRVRARLRELGEPITLFGEGPADRRDRLRELLTD 101
Query: 119 L 119
+
Sbjct: 102 I 102
>gi|349603920|gb|AEP99617.1| U4/U6 small nuclear ribonucleoprotein Prp4-like protein, partial
[Equus caballus]
Length = 429
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 39/45 (86%)
Query: 73 KKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
K+AR +NVSTDD++VK LR LGEPI LFGEGPAERR RLR++LS
Sbjct: 1 KRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILS 45
>gi|350633179|gb|EHA21545.1| hypothetical protein ASPNIDRAFT_45514 [Aspergillus niger ATCC 1015]
Length = 529
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
A+L +FER+++A + V TDD +V+ LR+LGEPI LFGEGPA+RR RLR+LL+ L
Sbjct: 47 AILSQFERKRRAAAMAVPTDDGRVRARLRELGEPITLFGEGPADRRDRLRELLTDL 102
>gi|317036331|ref|XP_001398136.2| pre-mRNA splicing factor [Aspergillus niger CBS 513.88]
Length = 529
Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
A+L +FER+++A + V TDD +V+ LR+LGEPI LFGEGPA+RR RLR+LL+ L
Sbjct: 47 AILSQFERKRRAAAMAVPTDDGRVRARLRELGEPITLFGEGPADRRDRLRELLTDL 102
>gi|56753746|gb|AAW25070.1| SJCHGC04552 protein [Schistosoma japonicum]
Length = 487
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 55 DDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRD 114
+DE+ K+ Q L + E RKKAR + VST+D++V+ LRQLGEP+CLFGE A+RR RLR
Sbjct: 22 NDEVDKNAQEALNQLELRKKARLIQVSTEDSEVRAYLRQLGEPVCLFGEDGADRRERLRM 81
Query: 115 LLS 117
+L+
Sbjct: 82 ILA 84
>gi|115491083|ref|XP_001210169.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197029|gb|EAU38729.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 531
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
A+L +FER+++A + V TDD +V+ LR+LGEPI LFGEGPA+RR RLR+LL+ L
Sbjct: 47 AILSQFERKRRAAAMAVPTDDTRVRARLRELGEPITLFGEGPADRRDRLRELLTDL 102
>gi|255945313|ref|XP_002563424.1| Pc20g09280 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588159|emb|CAP86257.1| Pc20g09280 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 521
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 45/56 (80%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
A+L +FER+++A + V TDD +V+ LR+LGEPI LFGEGP+ERR RLR+LL+ +
Sbjct: 48 AILSQFERKRRAAAMVVPTDDTRVRARLRELGEPITLFGEGPSERRDRLRELLTDM 103
>gi|134083698|emb|CAK42937.1| unnamed protein product [Aspergillus niger]
Length = 491
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
A+L +FER+++A + V TDD +V+ LR+LGEPI LFGEGPA+RR RLR+LL+ L
Sbjct: 47 AILSQFERKRRAAAMAVPTDDGRVRARLRELGEPITLFGEGPADRRDRLRELLTDL 102
>gi|83768744|dbj|BAE58881.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 512
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 46/56 (82%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
A+L +FER+++A + V TDD++V+ LR+LGEPI LFGEGPA+RR RLR+LL+ L
Sbjct: 29 AILSQFERKRRAAAMVVPTDDSRVRARLRELGEPITLFGEGPADRRDRLRELLTDL 84
>gi|238490740|ref|XP_002376607.1| pre-mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
gi|220697020|gb|EED53361.1| pre-mRNA splicing factor, putative [Aspergillus flavus NRRL3357]
Length = 513
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 46/56 (82%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
A+L +FER+++A + V TDD++V+ LR+LGEPI LFGEGPA+RR RLR+LL+ L
Sbjct: 30 AILSQFERKRRAAAMVVPTDDSRVRARLRELGEPITLFGEGPADRRDRLRELLTDL 85
>gi|425779440|gb|EKV17501.1| Pre-mRNA splicing factor, putative [Penicillium digitatum PHI26]
gi|425784088|gb|EKV21887.1| Pre-mRNA splicing factor, putative [Penicillium digitatum Pd1]
Length = 520
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 45/56 (80%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
A+L +FER+++A + V TDD +V+ LR+LGEPI LFGEGP+ERR RLR+LL+ +
Sbjct: 48 AILSQFERKRRAAAMVVPTDDTRVRARLRELGEPITLFGEGPSERRDRLRELLTDM 103
>gi|198422965|ref|XP_002129932.1| PREDICTED: similar to PRP4 pre-mRNA processing factor 4 homolog
[Ciona intestinalis]
Length = 512
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 74/121 (61%), Gaps = 8/121 (6%)
Query: 3 DDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTNVHTSN----VYMEIDDEM 58
++ +V +K + YGSLE ++ + ++ D K N++ S+ + M +++ +
Sbjct: 10 ENAEVATEEKPLSAQYGSLE----GKVGSKQEAIDMGIKAGNINISDPSETMEMTMEERI 65
Query: 59 AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
K + +L EFER+KK R + V+TDD+++K LR+ P+ LFGEGPA+RR RLR+ ++
Sbjct: 66 NKRQAEILAEFERKKKIRQIQVTTDDDEIKKLLRERNLPVTLFGEGPADRRERLRESIAE 125
Query: 119 L 119
+
Sbjct: 126 I 126
>gi|317145549|ref|XP_001820883.2| pre-mRNA splicing factor [Aspergillus oryzae RIB40]
gi|391865897|gb|EIT75176.1| U4/U6 small nuclear ribonucleoprotein [Aspergillus oryzae 3.042]
Length = 530
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 46/56 (82%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
A+L +FER+++A + V TDD++V+ LR+LGEPI LFGEGPA+RR RLR+LL+ L
Sbjct: 47 AILSQFERKRRAAAMVVPTDDSRVRARLRELGEPITLFGEGPADRRDRLRELLTDL 102
>gi|340923965|gb|EGS18868.1| hypothetical protein CTHT_0054790 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 531
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 8/90 (8%)
Query: 36 DDDQEKYTNVHTSNVYMEIDDEM--------AKDKQALLQEFERRKKARHVNVSTDDNQV 87
D + E V N+ ++ D E+ A+ ALL +FER++ A + V T D QV
Sbjct: 12 DAEMEDRGGVTLDNIPIDHDYEIPATAAGIPAEKASALLSQFERKRLAASIAVPTKDEQV 71
Query: 88 KLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+ LR+LGEPI LFGEGPA+RR RLR+LL+
Sbjct: 72 RAKLRELGEPITLFGEGPADRRDRLRELLT 101
>gi|430814241|emb|CCJ28500.1| unnamed protein product [Pneumocystis jirovecii]
Length = 481
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 56 DEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
+ ++ +Q +L EFERR+K +++ + TDD +V+ LR+LG+P+ LFGEGPA+RR RLR +
Sbjct: 22 NRYSEKEQIILAEFERRQKIKNIYIPTDDGRVRSKLRELGKPVTLFGEGPADRRDRLRQI 81
Query: 116 LSSL 119
LS+
Sbjct: 82 LSNF 85
>gi|339246247|ref|XP_003374757.1| putative acyltransferase [Trichinella spiralis]
gi|316972014|gb|EFV55720.1| putative acyltransferase [Trichinella spiralis]
Length = 590
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 44 NVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
N+ ++ + ++ ++ +L EF+RRK+AR + + TDD +VK LRQLG PICLFGE
Sbjct: 32 NIFKTDEHYTLESTTDSTREIMLAEFQRRKRARMMTLPTDDYEVKALLRQLGHPICLFGE 91
Query: 104 GPAERRSRLRDLLS 117
+RR RLR +LS
Sbjct: 92 DKPDRRERLRKILS 105
>gi|302414900|ref|XP_003005282.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Verticillium albo-atrum
VaMs.102]
gi|261356351|gb|EEY18779.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Verticillium albo-atrum
VaMs.102]
Length = 515
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 21 LEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNV 80
+EE + R A +DV D + ++ V E A++ +FER++ A + V
Sbjct: 10 VEEMDEDRGIALEDVPLDHDYEIPSASAGVAPE-------KASAVMAQFERKRLAASIAV 62
Query: 81 STDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
TDD +V+ LR+LGEP+ LFGEGPAERR RLR LL+
Sbjct: 63 PTDDGRVRAKLRELGEPVTLFGEGPAERRDRLRQLLA 99
>gi|407915673|gb|EKG09221.1| Hydrophobin fungi [Macrophomina phaseolina MS6]
Length = 522
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 45/59 (76%)
Query: 59 AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
++ A+L +FER++ A + V TDD +V+L LR+LGEPI LFGEGP +RR RLR+LL+
Sbjct: 45 SEKASAILAQFERKRLAATIAVPTDDTKVRLRLRELGEPITLFGEGPGDRRDRLRELLT 103
>gi|303289240|ref|XP_003063908.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454976|gb|EEH52281.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 490
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 56 DEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLR 113
+E ++ALL+EFE R++ R V V+TDD +V+ LR+LGEP+ LF EGP ERR RLR
Sbjct: 31 EETRTRQEALLREFENRRRQRAVAVTTDDREVRKQLRELGEPMTLFAEGPGERRDRLR 88
>gi|406867952|gb|EKD20989.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 560
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 10/102 (9%)
Query: 26 RKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEM-------AKDKQALLQ-EFERRKKARH 77
R++ AA+ D+ Q+ T + +NV ++ D +M A ++ + Q + +RRKKA
Sbjct: 46 RRKPAADGSGDNFQD--TGIDLTNVPLDNDYDMPSAGPGLAPERASAFQSQIDRRKKAAA 103
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ V TDD +V+ LRQLGEP+ FGEGP +RR RLR+LL+ L
Sbjct: 104 IAVPTDDKRVRERLRQLGEPVTEFGEGPGDRRDRLRELLADL 145
>gi|302687498|ref|XP_003033429.1| hypothetical protein SCHCODRAFT_54020 [Schizophyllum commune H4-8]
gi|300107123|gb|EFI98526.1| hypothetical protein SCHCODRAFT_54020 [Schizophyllum commune H4-8]
Length = 488
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 61 DKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ QALL E ER+KKAR + V TDDN+VK+ LR++GEPI LFGE A+RR RL +LS +
Sbjct: 15 ENQALLDELERKKKARAMAVPTDDNRVKMRLREIGEPITLFGERAADRRDRLIYVLSQI 73
>gi|358387146|gb|EHK24741.1| hypothetical protein TRIVIDRAFT_145460 [Trichoderma virens Gv29-8]
Length = 519
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 10/98 (10%)
Query: 21 LEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDK-QALLQEFERRKKARHVN 79
+EE E+ A +DV +D + M + D +K A+L +F R++ A +
Sbjct: 10 VEEAEQSTGIALEDVPEDHD---------YEMTMGDGAPPEKASAILNQFNRKRLAATIA 60
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
V TDD +V+ LR++GEPI LFGEGPA+RR RLR+LL+
Sbjct: 61 VPTDDGRVRAKLREMGEPITLFGEGPADRRDRLRELLT 98
>gi|367052897|ref|XP_003656827.1| hypothetical protein THITE_2122009 [Thielavia terrestris NRRL 8126]
gi|347004092|gb|AEO70491.1| hypothetical protein THITE_2122009 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 42/53 (79%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
ALL +FER++ A + V TDD +V+ LR+LGEPI LFGEGPA+RR RLR+LL
Sbjct: 48 ALLSKFERKRLAATIAVPTDDGRVRAKLRELGEPITLFGEGPADRRDRLRELL 100
>gi|346979541|gb|EGY22993.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Verticillium dahliae
VdLs.17]
Length = 515
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 21 LEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNV 80
+EE + R A +DV D + ++ V E A++ +FER++ A + V
Sbjct: 10 VEEMDDDRGIALEDVPLDHDYEIPSASAGVAPE-------KASAVMAQFERKRLAASIAV 62
Query: 81 STDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
TDD +V+ LR+LGEP+ LFGEGPAERR RLR LL+
Sbjct: 63 PTDDGRVRAKLRELGEPVTLFGEGPAERRDRLRQLLA 99
>gi|384485193|gb|EIE77373.1| hypothetical protein RO3G_02077 [Rhizopus delemar RA 99-880]
Length = 420
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
+ +L+EFERRK+A + V TDD +V+ LR+LGEP CLF EGP +RR RLR LLS ++
Sbjct: 64 RKVLEEFERRKRAFALAVPTDDGRVRQRLRELGEPQCLFCEGPGDRRDRLRYLLSRME 121
>gi|121719733|ref|XP_001276565.1| pre-mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
gi|119404777|gb|EAW15139.1| pre-mRNA splicing factor, putative [Aspergillus clavatus NRRL 1]
Length = 538
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 60/93 (64%), Gaps = 8/93 (8%)
Query: 35 VDDDQEKYTNVHTSNVYMEIDDEM--------AKDKQALLQEFERRKKARHVNVSTDDNQ 86
V++ ++ + +N+ ++ D E+ ++ A+L +FER+++A + V TDD++
Sbjct: 10 VEESEDTDMGIDLANLPVDRDYELPSAAAGIPSERASAILSQFERKRRAAAMVVPTDDSR 69
Query: 87 VKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
V+ LR+L EPI LFGEGP ERR RLR+LL+ L
Sbjct: 70 VRARLRELEEPITLFGEGPVERRDRLRELLTDL 102
>gi|367019146|ref|XP_003658858.1| hypothetical protein MYCTH_2295178 [Myceliophthora thermophila ATCC
42464]
gi|347006125|gb|AEO53613.1| hypothetical protein MYCTH_2295178 [Myceliophthora thermophila ATCC
42464]
Length = 532
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
ALL +FERR+ A + V TDD +V+ LR+LG PI LFGEGPA+RR RLR+LL+
Sbjct: 48 ALLSQFERRRLAATIAVPTDDARVRAKLRELGHPITLFGEGPADRRDRLRELLT 101
>gi|358335772|dbj|GAA54394.1| U4/U6 small nuclear ribonucleoprotein PRP4 [Clonorchis sinensis]
Length = 783
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 7 VIYVKKQNTVHYGSLEEQERK----------RLAANKDVDDDQEKYTNVHTSNVYMEIDD 56
+ K + V YG LE +R R+ D E + + + ++
Sbjct: 261 IFPPKDASIVQYGRLEWTKRTDVFTSNRCNGRIRLRTDFSISDELLPVLKSVGERLPLET 320
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+ + +Q +++ + RKKAR + VST+D++VK LRQLGEPICLFGE A+RR RLR LL
Sbjct: 321 QPSAAEQEAVRQMDLRKKARQLQVSTEDSEVKAYLRQLGEPICLFGEDGADRRERLRMLL 380
>gi|116181536|ref|XP_001220617.1| hypothetical protein CHGG_01396 [Chaetomium globosum CBS 148.51]
gi|88185693|gb|EAQ93161.1| hypothetical protein CHGG_01396 [Chaetomium globosum CBS 148.51]
Length = 492
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
ALL +FER++ A + V TDD +V+ LR+LG+P+ LFGEGPA+RR RLR+LL+
Sbjct: 48 ALLSQFERKRLAATIAVPTDDGRVRSKLRELGQPVTLFGEGPADRRDRLRELLT 101
>gi|330800283|ref|XP_003288167.1| hypothetical protein DICPUDRAFT_78987 [Dictyostelium purpureum]
gi|325081797|gb|EGC35300.1| hypothetical protein DICPUDRAFT_78987 [Dictyostelium purpureum]
Length = 529
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 42/51 (82%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
L ++ER+K+A+ V V T+DN VKL LR+LGEPI LFGE P +RR+RLR+LL
Sbjct: 59 LDDYERKKRAKQVIVPTNDNLVKLKLRELGEPIILFGEKPEDRRNRLRELL 109
>gi|392565597|gb|EIW58774.1| U4/U6 snRNP-specific spliceosomal protein [Trametes versicolor
FP-101664 SS1]
Length = 510
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 60 KDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
++ Q +L E ER+KKAR + V TDDN+VK LR++GEPI LFGE P +RR RL +LS +
Sbjct: 23 QENQVILDELERKKKARTLAVPTDDNKVKARLREIGEPITLFGERPPDRRDRLIYVLSQI 82
>gi|358398683|gb|EHK48034.1| hypothetical protein TRIATDRAFT_237465 [Trichoderma atroviride IMI
206040]
Length = 518
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 21 LEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNV 80
+EE E A +D+ +D + N+ D + A+L +F R++ A + V
Sbjct: 10 VEEAEHSTGIALEDLPEDHDYEMNMG--------DGAPPEKASAILSQFNRKRLAATIAV 61
Query: 81 STDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
TDD +V+ LR++GEP+ LFGEGPA+RR RLR+LL+
Sbjct: 62 PTDDGRVRARLREMGEPMTLFGEGPADRRDRLRELLT 98
>gi|395331737|gb|EJF64117.1| U4/U6 snRNP-specific spliceosomal protein [Dichomitus squalens
LYAD-421 SS1]
Length = 506
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 61 DKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ Q +L E ER+KKAR++ V TDDN+VK LR++GEPI LFGE P +RR RL +LS +
Sbjct: 24 ENQVILDELERKKKARNLAVPTDDNRVKARLREIGEPITLFGERPPDRRDRLIYVLSQI 82
>gi|302923127|ref|XP_003053610.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734551|gb|EEU47897.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 519
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Query: 21 LEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNV 80
+E+ E + A +D+ DD H +++M + A+L +F R++ A + V
Sbjct: 10 VEDAEPNQGIALEDIPDD-------HDYDLHMGGTGVAPEKASAILNQFNRKRLAATIAV 62
Query: 81 STDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
TDD +V+ LR++GEP+ LFGEGP +RR RLR+LL+
Sbjct: 63 PTDDGRVRAKLREMGEPMTLFGEGPVDRRDRLRELLT 99
>gi|353238806|emb|CCA70740.1| related to PRP4-U4/U6 small nuclear ribonucleoprotein
[Piriformospora indica DSM 11827]
Length = 495
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 45/58 (77%)
Query: 60 KDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
++ QA+L+E ER+K+AR + V TDD +V+ LR+LGEPI LFGE A+RR+RL L+S
Sbjct: 23 QENQAILEELERKKRARSIAVPTDDGRVRKRLRELGEPITLFGERAADRRARLIQLIS 80
>gi|429859915|gb|ELA34671.1| u4 u6 small nuclear ribonucleoprotein prp4 [Colletotrichum
gloeosporioides Nara gc5]
Length = 895
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A+L + ER+K A + V TDDN+V+ LR+LGEPI LFGEG ERR RLR+LL+
Sbjct: 429 AVLAQMERKKLAASIAVPTDDNRVRARLRELGEPITLFGEGKPERRDRLRNLLA 482
>gi|296412031|ref|XP_002835731.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629521|emb|CAZ79888.1| unnamed protein product [Tuber melanosporum]
Length = 522
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 28 RLAANKDVDDDQEKYTNV---HTSNVYMEIDDEMAKDK-QALLQEFERRKKARHVNVSTD 83
R A ++ D D NV N+ + +A +K A+L + +R+KKA + V TD
Sbjct: 8 RRAYVEEDDSDMVDLANVPIDRDYNLPQNLKSGIAPEKASAILSQMDRKKKAAAIVVPTD 67
Query: 84 DNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
D +V+ LR+LGEP+ LFGEGP +RR RLR+LL LQ
Sbjct: 68 DGRVRGRLRELGEPMTLFGEGPGDRRDRLRELLYQLQ 104
>gi|378733154|gb|EHY59613.1| pre-mRNA-processing factor 4 [Exophiala dermatitidis NIH/UT8656]
Length = 502
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 42/53 (79%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
A+L +F+R+++ V V TDD +V+ LR+LGEPI LFGEGPA+RR RLR++L
Sbjct: 29 AILSQFDRKRRLAQVAVPTDDGKVRARLRELGEPITLFGEGPADRRDRLREIL 81
>gi|402078026|gb|EJT73375.1| pre-mRNA splicing factor [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 528
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 58/90 (64%), Gaps = 8/90 (8%)
Query: 35 VDDDQEKYTNVHTSNVYMEIDDEM--------AKDKQALLQEFERRKKARHVNVSTDDNQ 86
V++ + + + SN+ ++ D ++ ++ L+ +FER++ A ++ V TDD +
Sbjct: 12 VEEAESEKRGIDLSNIPVDYDYDVPTSGAGIASEKASVLMSQFERKRLAANIAVPTDDGR 71
Query: 87 VKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
V+ LR++GEPI LFGEGPA+RR RLR+LL
Sbjct: 72 VRSRLREMGEPITLFGEGPADRRDRLRELL 101
>gi|301095756|ref|XP_002896977.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Phytophthora
infestans T30-4]
gi|262108406|gb|EEY66458.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Phytophthora
infestans T30-4]
Length = 525
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
Query: 30 AANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQA-LLQEFERRKKARHVNVSTDDNQVK 88
A N +V D NV T + + A++K A LL+ E K+AR++ V T +V
Sbjct: 43 AGNVNVSD------NVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVI 96
Query: 89 LNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
L LRQLGEPI LFGE PA+RR RLR++LS L+
Sbjct: 97 LRLRQLGEPITLFGERPADRRERLREILSRLE 128
>gi|340521978|gb|EGR52211.1| predicted protein [Trichoderma reesei QM6a]
Length = 519
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A+L +F R++ A + V TDD +V+ LR++GEPI LFGEGPA+RR RLR+LL+
Sbjct: 46 AILNQFNRKRLAATIAVPTDDGRVRAKLREMGEPITLFGEGPADRRDRLRELLT 99
>gi|347838635|emb|CCD53207.1| similar to U4/U6 small nuclear ribonucleoprotein Prp4 [Botryotinia
fuckeliana]
Length = 514
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A+L +F+R+++A + V TDD +V+ LR++GEPI LFGEGP +RR RLR LL+
Sbjct: 45 AILSQFDRKRRAAAIAVPTDDGRVRARLREMGEPITLFGEGPGDRRDRLRQLLT 98
>gi|154308836|ref|XP_001553753.1| hypothetical protein BC1G_07946 [Botryotinia fuckeliana B05.10]
Length = 509
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 42/54 (77%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A+L +F+R+++A + V TDD +V+ LR++GEPI LFGEGP +RR RLR LL+
Sbjct: 45 AILSQFDRKRRAAAIAVPTDDGRVRARLREMGEPITLFGEGPGDRRDRLRQLLT 98
>gi|402224697|gb|EJU04759.1| WD40 repeat-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 485
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 57 EMAK-DKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
E AK + +A+L E ER+K+AR + V TDD +V+ LR+LGEPI LFGE A+RR RL+ +
Sbjct: 22 ERAKAENKAILDELERKKRARTLAVPTDDGRVRARLRELGEPITLFGERAADRRDRLKYI 81
Query: 116 LSSL 119
LS L
Sbjct: 82 LSQL 85
>gi|320165512|gb|EFW42411.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Capsaspora owczarzaki
ATCC 30864]
Length = 495
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 42/59 (71%)
Query: 59 AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A + ++FER+ +A+ + V T+D V+ LRQLGEPI LFGEG AERR RLR+LLS
Sbjct: 14 AAQHDEIREDFERKIRAKQIVVPTNDEHVRKRLRQLGEPITLFGEGKAERRDRLRELLS 72
>gi|392590031|gb|EIW79361.1| WD40 repeat-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 487
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 61 DKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ Q +L E ER+KKAR++ V TDDN+VK LR++GEPI LFGE A+RR RL +LS +
Sbjct: 15 ENQVILDELERKKKARNMAVPTDDNRVKARLREIGEPITLFGERAADRRDRLIYVLSQI 73
>gi|390596597|gb|EIN05998.1| U4/U6 snRNP-specific spliceosomal protein [Punctularia
strigosozonata HHB-11173 SS5]
Length = 520
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 61 DKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ Q +L E ER+KKAR + V TDDN+VK LR++GEPI LFGE A+RR RL +LS +
Sbjct: 24 ENQVILDELERKKKARSMAVPTDDNRVKARLREIGEPITLFGERAADRRDRLIYVLSQI 82
>gi|336267310|ref|XP_003348421.1| hypothetical protein SMAC_02917 [Sordaria macrospora k-hell]
Length = 525
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
LL +FER++ A + V TDD +V+ LR++GEP+ LFGEGPA+RR RLR+L++
Sbjct: 48 LLSQFERKRLAASIAVPTDDGRVRAKLREMGEPVTLFGEGPADRRDRLRELMT 100
>gi|66806843|ref|XP_637144.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
gi|60465542|gb|EAL63626.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
Length = 600
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
Q +L E+ER+K+A+ V V T DN VKL LR+L EPI LFGE P RRSRLR++L
Sbjct: 55 QKVLDEYERKKRAKQVIVPTIDNLVKLKLRELLEPIILFGEKPEHRRSRLREIL 108
>gi|380092075|emb|CCC10343.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 526
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
LL +FER++ A + V TDD +V+ LR++GEP+ LFGEGPA+RR RLR+L++
Sbjct: 49 LLSQFERKRLAASIAVPTDDGRVRAKLREMGEPVTLFGEGPADRRDRLRELMT 101
>gi|310790881|gb|EFQ26414.1| WD domain-containing protein [Glomerella graminicola M1.001]
Length = 519
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A+L + ER+K A + V TDDN+V+ LR++GEPI LFGEG ERR RLR+LL+
Sbjct: 47 AVLAQMERKKLAASIAVPTDDNRVRAKLREMGEPITLFGEGKPERRDRLRNLLA 100
>gi|431900807|gb|ELK08248.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Pteropus alecto]
Length = 521
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 74/121 (61%), Gaps = 8/121 (6%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQE------KYTNVH-TSNVYMEIDD 56
D+ V V K+ ++YGSLEE+ER+RLA + +E + N++ TS EI++
Sbjct: 17 DDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIEAGNINITSGEVFEIEE 76
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + +L EFERRK+AR +NVSTDD++++ +L Q + L G + + LR++L
Sbjct: 77 HISERQAEVLAEFERRKRARQINVSTDDSEIE-HLSQYPAHVTLSEGGLSSQTKWLRNIL 135
Query: 117 S 117
S
Sbjct: 136 S 136
>gi|403415111|emb|CCM01811.1| predicted protein [Fibroporia radiculosa]
Length = 1343
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 61 DKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ + +L E ER+KKAR + V TDDN+VK LR++GEPI LFGE A+RR RL +LS +
Sbjct: 24 ENKVILDELERKKKARSLAVPTDDNRVKARLREIGEPITLFGERAADRRDRLIYVLSQI 82
>gi|171687265|ref|XP_001908573.1| hypothetical protein [Podospora anserina S mat+]
gi|170943594|emb|CAP69246.1| unnamed protein product [Podospora anserina S mat+]
Length = 546
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A++ +FER++ A + V TDD +V+ LR+LGEPI LFGEGP +RR RLR+LL+
Sbjct: 67 AIISQFERKRFAATIAVPTDDGRVRAKLRELGEPITLFGEGPVDRRDRLRELLT 120
>gi|156062614|ref|XP_001597229.1| hypothetical protein SS1G_01423 [Sclerotinia sclerotiorum 1980]
gi|154696759|gb|EDN96497.1| hypothetical protein SS1G_01423 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 514
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 42/54 (77%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A+L +F+R+++A + V TDD +V+ LR++GEP+ LFGEGP +RR RLR LL+
Sbjct: 45 AILSQFDRKRRAAAIAVPTDDGRVRARLREMGEPVTLFGEGPGDRRDRLRQLLT 98
>gi|336464376|gb|EGO52616.1| hypothetical protein NEUTE1DRAFT_72434 [Neurospora tetrasperma FGSC
2508]
Length = 526
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
LL +FER++ A + V TDD +V+ LR++GEP+ LFGEGPA+RR RLR+L++
Sbjct: 49 LLSQFERKRLAASIAVPTDDGRVRAKLREMGEPVTLFGEGPADRRDRLRELMT 101
>gi|350296467|gb|EGZ77444.1| WD40 repeat-like protein [Neurospora tetrasperma FGSC 2509]
Length = 526
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
LL +FER++ A + V TDD +V+ LR++GEP+ LFGEGPA+RR RLR+L++
Sbjct: 49 LLSQFERKRLAASIAVPTDDGRVRAKLREMGEPVTLFGEGPADRRDRLRELMT 101
>gi|164427237|ref|XP_001728376.1| hypothetical protein NCU11251 [Neurospora crassa OR74A]
gi|157071663|gb|EDO65285.1| hypothetical protein NCU11251 [Neurospora crassa OR74A]
Length = 526
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
LL +FER++ A + V TDD +V+ LR++GEP+ LFGEGPA+RR RLR+L++
Sbjct: 49 LLSQFERKRLAASIAVPTDDGRVRAKLREMGEPVTLFGEGPADRRDRLRELMT 101
>gi|346322387|gb|EGX91986.1| WD40 repeat-like-containing domain [Cordyceps militaris CM01]
Length = 517
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 46 HTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGP 105
H N+ ++ ++ A+L + R++ A + V TDD +V+ LR++GEPI LFGEGP
Sbjct: 27 HDYNIPTDVAGGTSEKASAILGQLNRKRLAATIAVPTDDGRVRAKLREMGEPITLFGEGP 86
Query: 106 AERRSRLRDLLS 117
+RR RLR+L++
Sbjct: 87 GDRRDRLRELMT 98
>gi|169849193|ref|XP_001831300.1| U4/U6 snRNP-specific spliceosomal protein [Coprinopsis cinerea
okayama7#130]
gi|116507568|gb|EAU90463.1| U4/U6 snRNP-specific spliceosomal protein [Coprinopsis cinerea
okayama7#130]
Length = 515
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
Q +L E ER+KKAR + TDDN+VK LR++GEPI LFGE A+RR RL +LS +
Sbjct: 26 QVILDELERKKKARGIAAPTDDNKVKARLREIGEPITLFGERAADRRDRLIYVLSQI 82
>gi|400602788|gb|EJP70386.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Beauveria bassiana
ARSEF 2860]
Length = 517
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 31 ANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLN 90
A +D+ DD H N+ I ++ A+L + R++ A + V TDD +V+
Sbjct: 19 ALEDLPDD-------HDYNLPTNIAGASSEKASAILGQLNRKRLAATIAVPTDDGRVRAK 71
Query: 91 LRQLGEPICLFGEGPAERRSRLRDLLS 117
LR++GEPI LFGEGP +RR RLR+L++
Sbjct: 72 LREMGEPITLFGEGPGDRRDRLRELMT 98
>gi|348677568|gb|EGZ17385.1| hypothetical protein PHYSODRAFT_314758 [Phytophthora sojae]
Length = 545
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
Query: 30 AANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQA-LLQEFERRKKARHVNVSTDDNQVK 88
A N +V D NV T + + A++K A LL+ E K+AR++ V T +V
Sbjct: 43 AGNVNVSD------NVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVI 96
Query: 89 LNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
LRQLGEPI LFGE PA+RR RLR++LS L+
Sbjct: 97 RRLRQLGEPITLFGERPADRRERLREILSRLE 128
>gi|326432164|gb|EGD77734.1| hypothetical protein PTSG_08825 [Salpingoeca sp. ATCC 50818]
Length = 511
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 44 NVHTSNVYMEIDD--EMAKDKQ-ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICL 100
N+ + M++ + +M + +Q A+L E ERRKK R V + D V L LR+LGEP+ L
Sbjct: 52 NISDTGARMQLSETSQMEQKRQDAILDELERRKKEREVLLPATDEGVILKLRELGEPVTL 111
Query: 101 FGEGPAERRSRLRDLLSS 118
FGE PA+RR RLR+ LS+
Sbjct: 112 FGEDPADRRIRLREFLSA 129
>gi|389745458|gb|EIM86639.1| U4/U6 snRNP-specific spliceosomal protein [Stereum hirsutum
FP-91666 SS1]
Length = 535
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 61 DKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ + +L E ER+KKAR + V TDDN+VK LR++GEPI LFGE A+RR RL +LS +
Sbjct: 24 ENKVILDELERKKKARAMAVPTDDNRVKARLREIGEPITLFGERAADRRDRLIYVLSQI 82
>gi|380470165|emb|CCF47868.1| WD repeat domain-containing protein [Colletotrichum higginsianum]
Length = 515
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A+L + ER+K A + V TDDN+V+ LR++GEPI FGEG ERR RLR+LL+
Sbjct: 47 AVLAQMERKKLAASIAVPTDDNRVRAKLREMGEPITFFGEGKPERRDRLRNLLA 100
>gi|345566782|gb|EGX49724.1| hypothetical protein AOL_s00078g213 [Arthrobotrys oligospora ATCC
24927]
Length = 513
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 44/55 (80%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
A++Q+F+++K+A + V TDDN+V+ LR+LGEPI LFGE ++RR RLR LL++
Sbjct: 46 AIIQQFDKKKRAAAITVPTDDNRVRAKLRELGEPITLFGEEKSDRRDRLRALLAA 100
>gi|452001776|gb|EMD94235.1| hypothetical protein COCHEDRAFT_1211664 [Cochliobolus
heterostrophus C5]
Length = 515
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 41/57 (71%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
+L+++F+R+++A + V T D VK LR GEPI LFGEGPAERR RLR LL+ Q
Sbjct: 47 SLMEDFDRKRRAAQLVVPTADRDVKAKLRSRGEPITLFGEGPAERRDRLRALLAEAQ 103
>gi|296806140|ref|XP_002843880.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Arthroderma otae CBS
113480]
gi|238845182|gb|EEQ34844.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Arthroderma otae CBS
113480]
Length = 534
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
A+L +FER+++A + V TDD +VK LR+LG PI LFGE +RR RLR++L+ L+
Sbjct: 47 AILSQFERKRRAAAIAVPTDDGRVKARLRELGHPITLFGEDSTDRRDRLREILADLE 103
>gi|328872892|gb|EGG21259.1| WD40 repeat-containing protein [Dictyostelium fasciculatum]
Length = 502
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 41/50 (82%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
L++FER+K+++HV + TDD VK+ LR+L EPI LFGE P ERR+RL+D+
Sbjct: 83 LEDFERKKRSKHVILPTDDALVKMKLRELSEPIILFGERPDERRARLKDI 132
>gi|302506839|ref|XP_003015376.1| hypothetical protein ARB_06499 [Arthroderma benhamiae CBS 112371]
gi|291178948|gb|EFE34736.1| hypothetical protein ARB_06499 [Arthroderma benhamiae CBS 112371]
Length = 516
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
A+L +FER+++A + V TDD +VK LR+LG PI LFGE +RR RLR++L+ L
Sbjct: 30 AILSQFERKRRAAAIAVPTDDGRVKARLRELGHPITLFGEDSTDRRDRLREVLADL 85
>gi|336368433|gb|EGN96776.1| hypothetical protein SERLA73DRAFT_93367 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381229|gb|EGO22381.1| hypothetical protein SERLADRAFT_451235 [Serpula lacrymans var.
lacrymans S7.9]
Length = 506
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 61 DKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ + +L E ER+KKAR++ V TDDN+VK LR++GEPI LFGE A+RR RL +LS +
Sbjct: 24 ENKVILDELERKKKARNMAVPTDDNRVKARLREIGEPITLFGERQADRRDRLIYVLSQI 82
>gi|58266782|ref|XP_570547.1| RNA processing-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134110414|ref|XP_776034.1| hypothetical protein CNBD0830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258702|gb|EAL21387.1| hypothetical protein CNBD0830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226780|gb|AAW43240.1| RNA processing-related protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 511
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 47 TSNVYM--EIDDEMAKDKQA-LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
T N Y IDDE + + A +++E ER+K+ R + V TDD +V+ LR GEPI LFGE
Sbjct: 8 TDNTYQLGGIDDERERAQNAAIIEELERKKRLRKLAVPTDDKKVRERLRAYGEPITLFGE 67
Query: 104 GPAERRSRLR 113
GP +RR RL+
Sbjct: 68 GPGDRRDRLK 77
>gi|440801831|gb|ELR22835.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Acanthamoeba
castellanii str. Neff]
Length = 511
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%)
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
E + ALL++ E K+AR + V T D V+ LR+LGEPI LFGE P ERR RLR++L
Sbjct: 50 ESQERHSALLEQLELSKRARQIAVPTSDPMVRARLRELGEPITLFGEQPPERRERLREVL 109
Query: 117 SSL 119
S +
Sbjct: 110 SRM 112
>gi|405119933|gb|AFR94704.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Cryptococcus neoformans
var. grubii H99]
Length = 511
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 47 TSNVYM--EIDDEMAKDKQA-LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGE 103
T N Y IDDE + + A +++E ER+K+ R + V TDD +V+ LR GEPI LFGE
Sbjct: 8 TDNTYQLGGIDDERERAQNAAIIEELERKKRLRKLAVPTDDKKVRERLRAYGEPITLFGE 67
Query: 104 GPAERRSRLR 113
GP +RR RL+
Sbjct: 68 GPGDRRDRLK 77
>gi|326472052|gb|EGD96061.1| pre-mRNA splicing factor [Trichophyton tonsurans CBS 112818]
gi|326477083|gb|EGE01093.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Trichophyton equinum
CBS 127.97]
Length = 533
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
A+L +FER+++A + V TDD +VK LR+LG PI LFGE +RR RLR++L+ L+
Sbjct: 47 AILSQFERKRRAAAIAVPTDDGRVKARLRELGHPITLFGEDSTDRRDRLREVLADLE 103
>gi|451849945|gb|EMD63248.1| hypothetical protein COCSADRAFT_93243 [Cochliobolus sativus ND90Pr]
Length = 515
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 41/57 (71%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
+L+++F+R+++A + V T D VK LR GEPI LFGEGPAERR RLR LL+ Q
Sbjct: 47 SLMEDFDRKRRAAQLVVPTADRDVKAKLRLRGEPITLFGEGPAERRDRLRALLAEAQ 103
>gi|302667323|ref|XP_003025248.1| hypothetical protein TRV_00564 [Trichophyton verrucosum HKI 0517]
gi|291189346|gb|EFE44637.1| hypothetical protein TRV_00564 [Trichophyton verrucosum HKI 0517]
Length = 526
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
A+L +FER+++A + V TDD +VK LR+LG PI LFGE +RR RLR++L+ L
Sbjct: 40 AILSQFERKRRAAAIAVPTDDGRVKARLRELGHPITLFGEDSTDRRDRLREVLADL 95
>gi|449547974|gb|EMD38941.1| hypothetical protein CERSUDRAFT_47016 [Ceriporiopsis subvermispora
B]
Length = 491
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 61 DKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ + +L E ER+KKAR + V TDDN+VK LR++GEPI LFGE A+RR RL +LS +
Sbjct: 24 ENKVILDELERKKKARSLAVPTDDNRVKGRLREIGEPITLFGERAADRRDRLIYVLSQI 82
>gi|315046252|ref|XP_003172501.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Arthroderma gypseum CBS
118893]
gi|311342887|gb|EFR02090.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Arthroderma gypseum CBS
118893]
Length = 533
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
A+L +FER+++A + V TDD +VK LR+LG PI LFGE +RR RLR++L+ L
Sbjct: 47 AILSQFERKRRAAAIAVPTDDGRVKARLRELGHPITLFGEDSTDRRDRLREILADL 102
>gi|281210657|gb|EFA84823.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
Length = 505
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 59/100 (59%), Gaps = 7/100 (7%)
Query: 16 VHYGSLEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKA 75
+ +G ++ K KD DD ++ T+ + +I + + Q L E E++K++
Sbjct: 9 IFFGGIQSSNLK-----KDKKDDNQQQTSTFLP--FSKITKDSQQKHQQTLDEHEKKKRS 61
Query: 76 RHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
+ + + T+DN +KL LR+LGEPI LFGE P +RR+RL+ L
Sbjct: 62 KLIVLPTNDNLIKLKLRELGEPIILFGEKPEDRRARLKQL 101
>gi|322708883|gb|EFZ00460.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Metarhizium anisopliae
ARSEF 23]
Length = 519
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A+L +F R++ A + V TDD +V+ LR++GEPI FGEGP +RR RLR+L++
Sbjct: 45 AILDQFNRKRLAATIAVPTDDGRVRAKLREIGEPITFFGEGPGDRRDRLRELMT 98
>gi|322698489|gb|EFY90259.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Metarhizium acridum
CQMa 102]
Length = 519
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A+L +F R++ A + V TDD +V+ LR++GEPI FGEGP +RR RLR+L++
Sbjct: 45 AILDQFNRKRLAATIAVPTDDGRVRAKLREIGEPITFFGEGPGDRRDRLRELMT 98
>gi|327305151|ref|XP_003237267.1| pre-mRNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326460265|gb|EGD85718.1| pre-mRNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 591
Score = 65.1 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
A+L +FER+++A + V TDD +VK LR+LG PI LFGE +RR RLR++L+ L+
Sbjct: 105 AILSQFERKRRAAAIAVPTDDGRVKARLRELGHPITLFGEDSTDRRDRLREVLADLE 161
>gi|392575485|gb|EIW68618.1| hypothetical protein TREMEDRAFT_69097 [Tremella mesenterica DSM
1558]
Length = 513
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 55 DDEMAKDKQA-LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLR 113
DDE + + A L+++ ER+K+ R + V TDD +VK LR GEPI LFGEGP +RR RL+
Sbjct: 20 DDERERAQNAALVEQLERKKRLRRMAVPTDDKKVKERLRAFGEPITLFGEGPGDRRDRLK 79
>gi|238596118|ref|XP_002393965.1| hypothetical protein MPER_06221 [Moniliophthora perniciosa FA553]
gi|215462225|gb|EEB94895.1| hypothetical protein MPER_06221 [Moniliophthora perniciosa FA553]
Length = 149
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+ +L E ER+KKAR + V TDDN+VK LR++GEPI LFGE A+RR RL +LS
Sbjct: 26 KVILDELERKKKARSLAVPTDDNRVKARLREIGEPITLFGERAADRRDRLIYVLS 80
>gi|328771697|gb|EGF81736.1| hypothetical protein BATDEDRAFT_9970, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 450
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 40/55 (72%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
A+L+ ERR+ AR + V TDD +V+ LR+L +PI LFGE P ERR RLR+ LS+
Sbjct: 1 AILESLERRRLARTLAVPTDDGRVRQKLRKLAQPITLFGERPGERRDRLREYLST 55
>gi|324507600|gb|ADY43222.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Ascaris suum]
Length = 492
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 66/105 (62%), Gaps = 11/105 (10%)
Query: 17 HYGSL--EEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKK 74
H+GSL EE +K K D +E++ ++ + ID+ M ++ ++ EFERR++
Sbjct: 14 HFGSLANEEAVQKIKEVEKQEPDKKEEHMDLDS------IDNPMERE---VMAEFERRRR 64
Query: 75 ARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
AR + + TDD VKL LR+L EPICLFGE +R+ RLR +LS++
Sbjct: 65 ARTLTLPTDDGHVKLLLRKLNEPICLFGEDKLDRKERLRTILSTM 109
>gi|169602957|ref|XP_001794900.1| hypothetical protein SNOG_04483 [Phaeosphaeria nodorum SN15]
gi|160706299|gb|EAT88243.2| hypothetical protein SNOG_04483 [Phaeosphaeria nodorum SN15]
Length = 500
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 39/53 (73%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
L++EF+R+++A + V T D VK LR GEPI LFGEGPA+RR RLR LL+
Sbjct: 39 LMEEFDRKRRAAALIVPTADRDVKAKLRSRGEPITLFGEGPADRRDRLRSLLA 91
>gi|321262675|ref|XP_003196056.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Cryptococcus gattii
WM276]
gi|317462531|gb|ADV24269.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Cryptococcus
gattii WM276]
Length = 512
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 55 DDEMAKDKQA-LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLR 113
DDE + + A +++E ER+K+ R + V TDD +V+ LR GEPI LFGEGP +RR RL+
Sbjct: 18 DDERERAQNAAIIEELERKKRLRKLAVPTDDKKVRERLRAYGEPITLFGEGPGDRRDRLK 77
>gi|291244641|ref|XP_002742204.1| PREDICTED: CG6322-like [Saccoglossus kowalevskii]
Length = 415
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 26/120 (21%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKRLAANKDVDDDQEKYTNVHTSNV-YMEIDDEMA 59
MSDDED K+Q ++YGSLE + +D + N++ S + + ++ +
Sbjct: 1 MSDDEDSTRFKRQK-IYYGSLEGKISDDNGGRGGMD-----FGNINLSEGDHFDFEEHIN 54
Query: 60 KDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
++ +L EFERRK+ LGEPICLFGEGPA+RR RLR L++L
Sbjct: 55 AQREEMLAEFERRKR-------------------LGEPICLFGEGPADRRERLRQHLANL 95
>gi|403348482|gb|EJY73678.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Oxytricha
trifallax]
Length = 532
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 21 LEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNV 80
L Q + AA + D+Q + SN E ++ + L++ +E ++K++++ +
Sbjct: 37 LVNQAMQARAAMQSQSDNQSTILTLSDSNA------EAIRNHENLMKAYEIQRKSKNLPI 90
Query: 81 STDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
T+D +VKL LR++ +PICLFGE P +RR RLR++++
Sbjct: 91 PTNDKEVKLRLREMEQPICLFGEDPGDRRERLRNVIT 127
>gi|443925444|gb|ELU44280.1| U4/U6 snRNP-specific spliceosomal protein [Rhizoctonia solani AG-1
IA]
Length = 515
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 56 DEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGP------AERR 109
D + + +ALL E +R+K+AR + V TDD++VK LR++GEPI LFGE P A+RR
Sbjct: 15 DRVRAENKALLDELDRKKRARTMAVPTDDSRVKARLREIGEPITLFGEPPIQCPQAADRR 74
Query: 110 SRLRDLLSSLQ 120
RL +LS ++
Sbjct: 75 DRLIYVLSQIR 85
>gi|403373495|gb|EJY86666.1| WD40 repeat-containing protein [Oxytricha trifallax]
Length = 202
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 56/88 (63%), Gaps = 6/88 (6%)
Query: 30 AANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKL 89
AA + D+Q + SN E ++ + L++ +E ++K++++ + T+D +VKL
Sbjct: 45 AAMQSQSDNQSTILTLSDSNA------EAIRNHENLMKAYELQRKSKNLPIPTNDKEVKL 98
Query: 90 NLRQLGEPICLFGEGPAERRSRLRDLLS 117
LR++ +PICLFGE P +RR RLR++++
Sbjct: 99 RLREMEQPICLFGEDPGDRRERLRNVIT 126
>gi|361126843|gb|EHK98829.1| putative endopolyphosphatase [Glarea lozoyensis 74030]
Length = 809
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A+L +F R++KA + V TDD +V+ LR++GEPI LFGEG +RR RLR L++
Sbjct: 528 AILNQFNRKRKAAAIAVPTDDGRVRARLREMGEPITLFGEGLGDRRDRLRQLMA 581
>gi|426196638|gb|EKV46566.1| hypothetical protein AGABI2DRAFT_205888 [Agaricus bisporus var.
bisporus H97]
Length = 517
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%)
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ +L E ER+KKAR + V TDD +V+ LR++GEPI LFGE A+RR RL +LS +
Sbjct: 26 KVILDELERKKKARSLAVPTDDTRVRARLREIGEPITLFGERAADRRDRLIYVLSQI 82
>gi|409081398|gb|EKM81757.1| hypothetical protein AGABI1DRAFT_35377 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 517
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%)
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ +L E ER+KKAR + V TDD +V+ LR++GEPI LFGE A+RR RL +LS +
Sbjct: 26 KVILDELERKKKARSLAVPTDDTRVRARLREIGEPITLFGERAADRRDRLIYVLSQI 82
>gi|300121899|emb|CBK22473.2| unnamed protein product [Blastocystis hominis]
Length = 160
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 74 KARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+ R +++ T D VKL LR GEPICLFGEGP +RRSRLR++L
Sbjct: 8 QGRIISIPTLDEDVKLQLRACGEPICLFGEGPGDRRSRLRNIL 50
>gi|170590149|ref|XP_001899835.1| U4/U6 small nuclear ribonucleoprotein hPrp4 [Brugia malayi]
gi|158592754|gb|EDP31351.1| U4/U6 small nuclear ribonucleoprotein hPrp4, putative [Brugia
malayi]
Length = 496
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/113 (41%), Positives = 63/113 (55%), Gaps = 24/113 (21%)
Query: 16 VHYGSLEEQE---------RKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALL 66
VH+GSL +E KR A KD D E +D+ M ++ ++
Sbjct: 16 VHFGSLANEEVVHKLQAEVEKREAERKDDQFDLEM------------VDNPMERE---VM 60
Query: 67 QEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
EFERR++AR + + TDD VKL LR+L EPICLFGE +R+ RLR LLS+L
Sbjct: 61 AEFERRRRARTLTLPTDDGHVKLLLRKLDEPICLFGEDKLDRKERLRALLSTL 113
>gi|312077130|ref|XP_003141168.1| U4/U6 small nuclear ribonucleoprotein hPrp4 [Loa loa]
gi|307763670|gb|EFO22904.1| U4/U6 small nuclear ribonucleoprotein hPrp4 [Loa loa]
Length = 496
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 24/113 (21%)
Query: 16 VHYGSLEEQE---------RKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALL 66
VH+GSL +E KR A +D D E +D+ M ++ ++
Sbjct: 16 VHFGSLANEEIVHKLQAEAEKREAEKRDDQFDLEM------------VDNPMERE---VM 60
Query: 67 QEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
EFERR++AR + + TDD VKL LR+L EPICLFGE +R+ RLR LLS+L
Sbjct: 61 AEFERRRRARTLTLPTDDGHVKLLLRKLNEPICLFGEDKLDRKERLRALLSTL 113
>gi|406695011|gb|EKC98326.1| RNA processing-related protein [Trichosporon asahii var. asahii CBS
8904]
Length = 524
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 53 EIDDEMAKDKQALLQE-FERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSR 111
+++DE + + A L E ER+K+ R + V TDD +V+ LR GEPI LFGEGP +RR R
Sbjct: 7 DLNDERERAQNAALHEQLERKKRMRRMAVPTDDRKVRERLRAFGEPITLFGEGPGDRRDR 66
Query: 112 LRDLLSSLQ 120
L+ + S +
Sbjct: 67 LKIIQESYE 75
>gi|320591880|gb|EFX04319.1| pre-mRNA splicing factor [Grosmannia clavigera kw1407]
Length = 544
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 9/98 (9%)
Query: 28 RLAANKDVDDDQEKYTNVHTSNVYMEIDDEM-------AKDKQA-LLQEFERRKKARHVN 79
RLA +D +D ++ + ++V +E D EM A +K + LL + R+K A +
Sbjct: 7 RLAYVEDAED-VDRRGGIDLASVPLEHDYEMPVTASGMAPEKASELLAQLARKKIAATIA 65
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
V +D +V+ LR+LGEP FGEGPA+R++RLR+LL+
Sbjct: 66 VPKEDGKVRERLRELGEPATQFGEGPADRKARLRELLA 103
>gi|401885307|gb|EJT49428.1| RNA processing-related protein [Trichosporon asahii var. asahii CBS
2479]
Length = 524
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 53 EIDDEMAKDKQALLQE-FERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSR 111
+++DE + + A L E ER+K+ R + V TDD +V+ LR GEPI LFGEGP +RR R
Sbjct: 7 DLNDERERAQNAALHEQLERKKRMRRMAVPTDDRKVRERLRAFGEPITLFGEGPGDRRDR 66
Query: 112 LRDLLSSLQ 120
L+ + S +
Sbjct: 67 LKIIQESYE 75
>gi|46107170|ref|XP_380644.1| hypothetical protein FG00468.1 [Gibberella zeae PH-1]
Length = 518
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 31 ANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLN 90
A +DV DD H ++ M ++ A+L +F R++ A + V TDD +V+
Sbjct: 19 ALEDVPDD-------HDYDISMGGTGVPSEKASAILNQFNRKRLAATIAVPTDDTRVRAK 71
Query: 91 LRQLGEPICLFGEGPAERRSRLRDLLS 117
LR++GEP+ LFGE +RR RLR+LL+
Sbjct: 72 LREMGEPVTLFGEALVDRRDRLRELLT 98
>gi|342879396|gb|EGU80647.1| hypothetical protein FOXB_08870 [Fusarium oxysporum Fo5176]
Length = 519
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 21 LEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNV 80
+E+ E + +A +DV DD H ++ M ++ A+L +F R++ A + V
Sbjct: 10 VEDAEPQGIAL-EDVPDD-------HDYDIPMGGTGVPSEKASAILSQFNRKRLAATIAV 61
Query: 81 STDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
TDD +V+ LR++GEP+ LFGE +RR RLR+LL+
Sbjct: 62 PTDDTRVRAKLREMGEPVTLFGEALVDRRDRLRELLT 98
>gi|408398654|gb|EKJ77783.1| hypothetical protein FPSE_02017 [Fusarium pseudograminearum CS3096]
Length = 518
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 21 LEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNV 80
+E+ E + +A +D+ DD H ++ M ++ A+L +F R++ A + V
Sbjct: 10 VEDAEPQGIAL-EDIPDD-------HDYDISMGGTGVPSEKASAILNQFNRKRLAATIAV 61
Query: 81 STDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
TDD +V+ LR++GEP+ LFGE +RR RLR+LL+
Sbjct: 62 PTDDTRVRAKLREMGEPVTLFGEALVDRRDRLRELLT 98
>gi|402590606|gb|EJW84536.1| hypothetical protein WUBG_04553 [Wuchereria bancrofti]
Length = 496
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 24/113 (21%)
Query: 16 VHYGSLEEQE---------RKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALL 66
VH+GSL +E KR A KD D + +D+ M ++ ++
Sbjct: 16 VHFGSLANEEVVHKLQAEAEKREAERKDDQFDLDM------------VDNPMERE---VM 60
Query: 67 QEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
EFERR++AR + + TDD VKL LR+L EPICLFGE +R+ RLR LLS+L
Sbjct: 61 AEFERRRRARTLTLPTDDGHVKLLLRKLDEPICLFGEDKLDRKERLRALLSTL 113
>gi|388580733|gb|EIM21046.1| RNA processing-related protein [Wallemia sebi CBS 633.66]
Length = 499
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 52 MEIDDEMAKDK-QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRS 110
M E+A+ + QA FERR+ R + V TDDN+V+ LR G P+ LFGE P +RRS
Sbjct: 19 MGTGQELARAELQATEDMFERRRVLRTLAVPTDDNKVRERLRAFGLPMTLFGERPEDRRS 78
Query: 111 RLRDLLSSLQ 120
RL+ +++ +Q
Sbjct: 79 RLKSMIADMQ 88
>gi|308499445|ref|XP_003111908.1| CRE-PRP-4 protein [Caenorhabditis remanei]
gi|308268389|gb|EFP12342.1| CRE-PRP-4 protein [Caenorhabditis remanei]
Length = 496
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+L EF+RR++AR + + TDD QVKL LR L +PICLFGE +RR RLR LLS++
Sbjct: 59 MLAEFDRRRRARTLTLPTDDVQVKLKLRALNQPICLFGEDALDRRERLRALLSTM 113
>gi|395854491|ref|XP_003799723.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small nuclear
ribonucleoprotein Prp4-like [Otolemur garnettii]
Length = 649
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRLAANK-DVDDDQEKYTNVHTSNVYMEIDDEMAKDK 62
D+ V V K+ V Y +LE +ER+ LA K ++ +++ + + + E+ +
Sbjct: 148 DDLVAPVGKKLHVGYRNLEAKERESLAQVKSEIWEEKGLKAGIEVGHTFGEVFETEENTS 207
Query: 63 QALLQEFERRKKARHVNVS---TDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A + + K V+ S D+++V LR LGEPI FGEGP ERR RL+++LS
Sbjct: 208 SAWQKRWLSLKDGSEVSKSLFPXDNSEVMTCLRALGEPITCFGEGPVERRERLKNILS 265
>gi|321479207|gb|EFX90163.1| hypothetical protein DAPPUDRAFT_299967 [Daphnia pulex]
Length = 432
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 34/38 (89%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
++ DD +++ +LRQ+GEPI LFGEGPA+RR+RL++LLS
Sbjct: 9 ITIDDGEIRKHLRQIGEPITLFGEGPADRRNRLKELLS 46
>gi|268566125|ref|XP_002639641.1| C. briggsae CBR-PRP-4 protein [Caenorhabditis briggsae]
Length = 496
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 52 MEIDDEM-AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRS 110
ME+ ++ ++ +L EF+RR++AR + + TDD QVKL LR L +PICLFGE +RR
Sbjct: 45 MEVTNQADSRHDAEMLAEFDRRRRARTLTLPTDDVQVKLKLRALNQPICLFGEDALDRRE 104
Query: 111 RLRDLLSSL 119
RLR LLS++
Sbjct: 105 RLRALLSTM 113
>gi|255087876|ref|XP_002505861.1| predicted protein [Micromonas sp. RCC299]
gi|226521131|gb|ACO67119.1| predicted protein [Micromonas sp. RCC299]
Length = 446
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
V V+TDD+QV+ LR LGEPI LFGEGP +RR RLR L+ L
Sbjct: 14 VAVTTDDSQVRKQLRALGEPITLFGEGPGDRRDRLRKKLAEL 55
>gi|341882090|gb|EGT38025.1| CBN-PRP-4 protein [Caenorhabditis brenneri]
Length = 496
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+L EF+RR++AR + + TDD QVKL LR L +PICLFGE +RR RLR LLS++
Sbjct: 59 MLAEFDRRRRARTLTLPTDDVQVKLKLRALNQPICLFGEDALDRRERLRALLSTM 113
>gi|440636849|gb|ELR06768.1| hypothetical protein GMDG_02206 [Geomyces destructans 20631-21]
Length = 408
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
A L + +R+K+A V T D V+ LR + EPI L+GEGP +RR RLR+LL
Sbjct: 27 AFLSQLDRKKRAAATIVPTSDTAVRAALRAISEPITLYGEGPGDRRDRLRELL 79
>gi|145356501|ref|XP_001422467.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582710|gb|ABP00784.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 476
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 60 KDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
K ++ L++EFE R++ R + T D V+ LR+ EPI LFGE +ERR RLR LL+SL
Sbjct: 18 KQREELVREFESRRRLRATHAPTHDADVRAMLRKYREPITLFGERESERRDRLRALLASL 77
>gi|449297566|gb|EMC93584.1| hypothetical protein BAUCODRAFT_95433 [Baudoinia compniacensis UAMH
10762]
Length = 483
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 71 RRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
R++KA + V TDD +V+L LR GEPI LFGE P +RR RLR+LL
Sbjct: 3 RKRKAASLAVPTDDKRVRLELRSRGEPITLFGERPEDRRERLRELL 48
>gi|428163615|gb|EKX32677.1| hypothetical protein GUITHDRAFT_166652, partial [Guillardia theta
CCMP2712]
Length = 479
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 74 KARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+AR V T+D+ VK+ LR+ EPICLFGEGPAERR RL+ +L+
Sbjct: 2 RARTVAAPTNDHDVKMQLRKFREPICLFGEGPAERRDRLKIILA 45
>gi|17505895|ref|NP_492363.1| Protein PRP-4 [Caenorhabditis elegans]
gi|3874777|emb|CAB02270.1| Protein PRP-4 [Caenorhabditis elegans]
Length = 496
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 52 MEIDDEM-AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRS 110
ME+ ++ ++ + EF+RR++AR + + TDD QVKL LR L +PICLFGE +RR
Sbjct: 45 MEVSNQADSRHDAEMFAEFDRRRRARTLTLPTDDVQVKLKLRALNQPICLFGEDALDRRE 104
Query: 111 RLRDLLSSL 119
RLR LLS++
Sbjct: 105 RLRALLSTM 113
>gi|119195649|ref|XP_001248428.1| hypothetical protein CIMG_02199 [Coccidioides immitis RS]
gi|392862367|gb|EAS36992.2| pre-mRNA splicing factor [Coccidioides immitis RS]
Length = 541
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 31 ANKDVDDDQEKYTNVHTSNVYMEIDDEMA----KDKQALLQEFERRKKARHVNVSTDDNQ 86
A +D D D N+ Y E+ A + A+L +F R+++A + V TDD +
Sbjct: 12 ATEDTDMDGVDLANIPVDRDY-ELPAATAGIAPEKASAILSQFSRKRRAAAIPVPTDDGR 70
Query: 87 VKLNLRQLGEPICLFGEGPAERRSRLR 113
V+ LR+LG PI LFGE +RR RLR
Sbjct: 71 VRSRLRELGHPITLFGEDATDRRDRLR 97
>gi|307109866|gb|EFN58103.1| hypothetical protein CHLNCDRAFT_20357 [Chlorella variabilis]
Length = 454
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 60 KDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ ++ L++E E R+K + V T+D +V+ LRQL EPI LFGE ERR RLR +L+ +
Sbjct: 2 RKQEELMKEIELRRKMKATVVPTNDQEVRRMLRQLREPITLFGEREMERRDRLRKMLAGM 61
>gi|224090045|ref|XP_002308919.1| predicted protein [Populus trichocarpa]
gi|222854895|gb|EEE92442.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 62 KQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+Q +QEF +K+A + V T+D V+ LR+LGEPI LFGE ERR RLR L++ L
Sbjct: 98 QQKAMQEFMMKKRAAALAVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMLMAKL 155
>gi|358054430|dbj|GAA99356.1| hypothetical protein E5Q_06051 [Mixia osmundae IAM 14324]
Length = 540
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
LL E ER+ +AR + + T+D V+ LR+LGEPI LFGE +RR RLR ++S
Sbjct: 31 LLAELERKTQARKLAIPTNDVDVRARLRELGEPITLFGEKREDRRDRLRTVVS 83
>gi|401405236|ref|XP_003882068.1| putative U4/U6 small nuclear ribonucleoprotein [Neospora caninum
Liverpool]
gi|325116482|emb|CBZ52036.1| putative U4/U6 small nuclear ribonucleoprotein [Neospora caninum
Liverpool]
Length = 717
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 16 VHYGSLEEQERKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEMAKDK-QALLQEFERRKK 74
+++G + +AA DV + V T + E++ E A + Q LL+ FE ++K
Sbjct: 34 IYFGPVSGTAPAGVAAVSDVTGE------VDTGSGGQEVEAEPAVQRHQELLKRFEIQQK 87
Query: 75 ARHVNV--STDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A + T D VK LR LG PICLFGEGP ERR RL+ L +
Sbjct: 88 ASNFQAVCPTHDRTVKKVLRALGHPICLFGEGPFERRQRLKLLFA 132
>gi|389633037|ref|XP_003714171.1| pre-mRNA splicing factor [Magnaporthe oryzae 70-15]
gi|351646504|gb|EHA54364.1| pre-mRNA splicing factor [Magnaporthe oryzae 70-15]
Length = 531
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 26 RKRLAANKDVDDDQEKYTNVHTSNVYMEIDDEM------AKDKQALLQEFERRKKARHVN 79
R+ N + + Q + + S+V M+ + +M + + A++ F+R+K A +
Sbjct: 8 RQAYVENAESQNAQPR-GQIALSDVPMDYNYDMPAGAGASGNASAIMSGFDRKKIADAIP 66
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
V T+D +V+ LR +GEPI LFGE ERR RLR+LL
Sbjct: 67 VPTNDVRVRARLRDMGEPITLFGEDAKERRDRLRELL 103
>gi|388856590|emb|CCF49896.1| related to PRP4-U4/U6 small nuclear ribonucleoprotein [Ustilago
hordei]
Length = 518
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 37/59 (62%)
Query: 59 AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A AL + ERRK AR + + T D +V+L LR+LGE FGEG +RR RLR LL+
Sbjct: 30 ATPDAALSAQLERRKLARSLAIPTSDAKVRLGLRELGEATRCFGEGEMDRRERLRQLLA 88
>gi|440473679|gb|ELQ42461.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Magnaporthe oryzae Y34]
gi|440486689|gb|ELQ66529.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Magnaporthe oryzae
P131]
Length = 521
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 61 DKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+ A++ F+R+K A + V T+D +V+ LR +GEPI LFGE ERR RLR+LL
Sbjct: 38 NASAIMSGFDRKKIADAIPVPTNDVRVRARLRDMGEPITLFGEDAKERRDRLRELL 93
>gi|328863184|gb|EGG12284.1| hypothetical protein MELLADRAFT_24633 [Melampsora larici-populina
98AG31]
Length = 459
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 58 MAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+ D LL +R ++R + V T++ +++ LR+LGEP+ LFGE P +RR RLR +LS
Sbjct: 1 LQADHANLLSSLDRATRSRQLAVPTNEVAIRVRLRELGEPMTLFGERPEDRRDRLRYVLS 60
Query: 118 SL 119
+
Sbjct: 61 QI 62
>gi|167526242|ref|XP_001747455.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774290|gb|EDQ87922.1| predicted protein [Monosiga brevicollis MX1]
Length = 894
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/43 (60%), Positives = 30/43 (69%)
Query: 74 KARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+AR +NV D VK LR GEPICLFGE P +RR RLRDL+
Sbjct: 471 QARALNVPAADMDVKKMLRSFGEPICLFGENPGDRRERLRDLI 513
>gi|118345960|ref|XP_976809.1| hypothetical protein TTHERM_00700970 [Tetrahymena thermophila]
gi|89288226|gb|EAR86214.1| hypothetical protein TTHERM_00700970 [Tetrahymena thermophila
SB210]
Length = 545
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 47/148 (31%)
Query: 11 KKQNTVHYGSLEEQERKRL------------------AAN-------------------- 32
K++ ++YGSLEEQER+R+ A N
Sbjct: 5 KQEERIYYGSLEEQERQRIIDEEKQKQERKQQQASQSAPNSSSDQQQSQQVQTGQLKSLG 64
Query: 33 ----KDVDDDQEKYTNVHTSNVYMEIDDEMAKDKQAL---LQEFERRKKARHVNVSTDDN 85
K + D + TNV +E+ + ++K+ +++ E +KKA + V T+D
Sbjct: 65 GKQLKSLADKDKSQTNVQIE--VLELSEHALEEKRRHDENMRKLELQKKASTMIVPTNDK 122
Query: 86 QVKLNLRQLGEPICLFGEGPAERRSRLR 113
+VK LRQLG PIC FGE A+RR RL+
Sbjct: 123 EVKYRLRQLGHPICYFGENNADRRERLK 150
>gi|261197958|ref|XP_002625381.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239595344|gb|EEQ77925.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239607807|gb|EEQ84794.1| pre-mRNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327355750|gb|EGE84607.1| U4/U6 small nuclear ribonucleoprotein PRP4 [Ajellomyces
dermatitidis ATCC 18188]
Length = 530
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 43/57 (75%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
A+L +F RR++A + V T+D++V+ LR+LG PI LFGE A+RR RLR+LL+ L+
Sbjct: 30 AILSQFSRRRRAAAIAVPTEDSRVRARLRELGHPITLFGEDAADRRDRLRELLTDLE 86
>gi|343426684|emb|CBQ70213.1| related to PRP4-U4/U6 small nuclear ribonucleoprotein [Sporisorium
reilianum SRZ2]
Length = 490
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 37 DDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGE 96
DD + V ++ + AL + + RK AR++ + T D +V+L LRQLGE
Sbjct: 4 DDAPTTSGVTIEDLLSSRSHAYSATDAALSAQLDARKVARNLAIPTSDPKVRLRLRQLGE 63
Query: 97 PICLFGEGPAERRSRLRDLLS 117
PI FGE +RR RLR L++
Sbjct: 64 PITCFGEREMDRRERLRQLVA 84
>gi|308811046|ref|XP_003082831.1| putative small nuclear ribonucleoprotein Prp4p (ISS) [Ostreococcus
tauri]
gi|116054709|emb|CAL56786.1| putative small nuclear ribonucleoprotein Prp4p (ISS) [Ostreococcus
tauri]
Length = 455
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 62 KQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
++ ++++FE R+K R V T+D + LR+ GEP+ LFGE +RR RLR +L++L
Sbjct: 8 RREIVEKFESRRKLRATTVPTNDAATRAELRRRGEPVTLFGEREGDRRERLRGILAAL 65
>gi|403160617|ref|XP_003321099.2| serine/threonine-protein kinase PRP4 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375170323|gb|EFP76680.2| serine/threonine-protein kinase PRP4 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 540
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
ALL +R ++R + V T++ +++ LR+LGEP+ LFGE P +RR RLR +LS +
Sbjct: 29 ALLTSLDRATRSRQLAVPTNEVAIRVRLRELGEPMTLFGERPEDRRDRLRYVLSQI 84
>gi|295665374|ref|XP_002793238.1| U4/U6 small nuclear ribonucleoprotein PRP4 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226278152|gb|EEH33718.1| U4/U6 small nuclear ribonucleoprotein PRP4 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 546
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 10/101 (9%)
Query: 28 RLAANKDVDDDQEKYTNVHTSNVYMEIDDEM-------AKDK-QALLQEFERRKKARHVN 79
R A +D +D E V +N+ ++ D +M A +K A+L +F RR++A +
Sbjct: 5 RRAYVEDAPEDTE--MGVDLNNIPLDRDYDMPSATAGIAPEKASAILSQFSRRRRAAAIA 62
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
V TDD +V+ LR+LG+PI LF E +RR RLR+LL+ L+
Sbjct: 63 VPTDDGRVRARLRELGQPITLFAEDATDRRDRLRELLTDLE 103
>gi|226290984|gb|EEH46412.1| U4/U6 small nuclear ribonucleoprotein PRP4 [Paracoccidioides
brasiliensis Pb18]
Length = 543
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 10/101 (9%)
Query: 28 RLAANKDVDDDQEKYTNVHTSNVYMEIDDEMA--------KDKQALLQEFERRKKARHVN 79
R A +D +D E V +N+ ++ D +M + A+L +F RR++A +
Sbjct: 5 RRAYVEDAPEDTE--MGVDLNNIPLDRDYDMPSATAGIAPEKASAILSQFSRRRRAAAIA 62
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
V TDD +V+ LR+LG+PI LF E +RR RLR+LL+ L+
Sbjct: 63 VPTDDGRVRARLRELGQPITLFAEDATDRRDRLRELLTDLE 103
>gi|237835111|ref|XP_002366853.1| U4/U6 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211964517|gb|EEA99712.1| U4/U6 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
Length = 711
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 55 DDEMAKDKQALLQEFERRKKARHVNV--STDDNQVKLNLRQLGEPICLFGEGPAERRSRL 112
++ + +Q LL+ FE ++KA + T D V+ LR LG PICLFGEGP ERR RL
Sbjct: 61 EEPAVQKQQELLKRFEVQQKASNFQAVCPTHDRTVRKVLRALGHPICLFGEGPFERRQRL 120
Query: 113 RDLLS 117
+ L +
Sbjct: 121 KVLFA 125
>gi|221485852|gb|EEE24122.1| U4/U6 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
GT1]
Length = 711
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 55 DDEMAKDKQALLQEFERRKKARHVNV--STDDNQVKLNLRQLGEPICLFGEGPAERRSRL 112
++ + +Q LL+ FE ++KA + T D V+ LR LG PICLFGEGP ERR RL
Sbjct: 61 EEPAVQKQQELLKRFEVQQKASNFQAVCPTHDRTVRKVLRALGHPICLFGEGPFERRQRL 120
Query: 113 RDLLS 117
+ L +
Sbjct: 121 KVLFA 125
>gi|221503781|gb|EEE29465.1| U4/U6 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
VEG]
Length = 711
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 55 DDEMAKDKQALLQEFERRKKARHVNV--STDDNQVKLNLRQLGEPICLFGEGPAERRSRL 112
++ + +Q LL+ FE ++KA + T D V+ LR LG PICLFGEGP ERR RL
Sbjct: 61 EEPAVQKQQELLKRFEVQQKASNFQAVCPTHDRTVRKVLRALGHPICLFGEGPFERRQRL 120
Query: 113 RDLLS 117
+ L +
Sbjct: 121 KVLFA 125
>gi|449505667|ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
protein-like [Cucumis sativus]
Length = 568
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+QEF +++A + V T+D V+ LR+LGEPI LFGE ERR RLR +++ L
Sbjct: 122 MQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARL 175
>gi|449458027|ref|XP_004146749.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
protein-like [Cucumis sativus]
Length = 569
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+QEF +++A + V T+D V+ LR+LGEPI LFGE ERR RLR +++ L
Sbjct: 123 MQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARL 176
>gi|325190545|emb|CCA25043.1| U4/U6 small nuclear ribonucleoprotein Prp4 putative [Albugo
laibachii Nc14]
Length = 529
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 59 AKDKQA-LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A++K A +L+ E ++AR++ V T ++V L LRQLG+PI L+ EGPA+RR RLR LLS
Sbjct: 68 AQEKHAQILRRMEAERRARNIAVPTSVDEVILRLRQLGQPITLYSEGPADRRERLRQLLS 127
Query: 118 SLQ 120
L+
Sbjct: 128 QLE 130
>gi|225679272|gb|EEH17556.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Paracoccidioides
brasiliensis Pb03]
Length = 513
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 41/57 (71%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
A+L +F RR++A + V TDD +V+ LR+LG+PI LF E +RR RLR+LL+ L+
Sbjct: 15 AILSQFSRRRRAAAIAVPTDDGRVRARLRELGQPITLFAEDATDRRDRLRELLTDLE 71
>gi|330926044|ref|XP_003301302.1| hypothetical protein PTT_12767 [Pyrenophora teres f. teres 0-1]
gi|311324095|gb|EFQ90603.1| hypothetical protein PTT_12767 [Pyrenophora teres f. teres 0-1]
Length = 515
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERR 109
+L+++F+R+++A + V T D VK LR GEPI LFGEGP+ERR
Sbjct: 47 SLMEDFDRKRRAAQLIVPTADRDVKARLRSRGEPITLFGEGPSERR 92
>gi|154413347|ref|XP_001579704.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121913913|gb|EAY18718.1| hypothetical protein TVAG_063230 [Trichomonas vaginalis G3]
Length = 415
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 72 RKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+KK + V TDD + LR++GEPICLFGE PA+RR RL+ +L+
Sbjct: 14 KKKMSQIPVPTDDADIMKMLRKVGEPICLFGEDPADRRERLKRVLA 59
>gi|357112133|ref|XP_003557864.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
protein-like [Brachypodium distachyon]
Length = 509
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
+QE +R++A + V T+D+ V+ LR+LGEPI LFGE ERR RLR L+ L+
Sbjct: 67 VQELLQRRRAYAMAVPTNDSAVRARLRRLGEPITLFGEREMERRDRLRALMVRLE 121
>gi|147819065|emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
Length = 1088
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 48 SNVYMEIDDE---MAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEG 104
S V EI +E + ++ QEF +++A + V T+D V+ LR+LGEPI LFGE
Sbjct: 620 SAVEYEISEESRQFRERQEKAKQEFLMKRRASALAVPTNDMAVRTRLRRLGEPITLFGER 679
Query: 105 PAERRSRLRDLLSSL 119
ERR RLR +++ L
Sbjct: 680 EMERRDRLRMIMAKL 694
>gi|225561892|gb|EEH10172.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Ajellomyces capsulatus
G186AR]
Length = 545
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
A+L +F RR++A + V T+D++V+ LR+LG PI LFGE +RR RLR+LL+ L+
Sbjct: 46 AILSQFSRRRRAAAIAVPTEDSRVRARLRELGHPITLFGEDATDRRDRLRELLTDLE 102
>gi|108708208|gb|ABF96003.1| U4/U6 small nuclear ribonucleoprotein PRP4, putative, expressed
[Oryza sativa Japonica Group]
gi|108708212|gb|ABF96007.1| U4/U6 small nuclear ribonucleoprotein PRP4, putative, expressed
[Oryza sativa Japonica Group]
Length = 524
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
Query: 53 EIDDEMAKDKQAL-------LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGP 105
E D E++ D +A +QE +R++A + V T+D+ V+ LR+LGEP+ LFGE
Sbjct: 60 EADYEVSDDHRAARERHERAVQELLQRRRAFAMAVPTNDSAVRARLRRLGEPVTLFGERE 119
Query: 106 AERRSRLRDLLSSLQ 120
ERR RLR L+ L+
Sbjct: 120 MERRDRLRALMVRLE 134
>gi|395146482|gb|AFN53638.1| hypothetical protein [Linum usitatissimum]
Length = 685
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 53 EIDDE---MAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERR 109
EI +E + + +Q +QE +++A + V T+D V+ LR+LGEPI LFGE ERR
Sbjct: 242 EISEESRLVRERQQKAIQELMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERR 301
Query: 110 SRLRDLLSSL 119
RLR L++ L
Sbjct: 302 DRLRMLMAKL 311
>gi|242040915|ref|XP_002467852.1| hypothetical protein SORBIDRAFT_01g035220 [Sorghum bicolor]
gi|241921706|gb|EER94850.1| hypothetical protein SORBIDRAFT_01g035220 [Sorghum bicolor]
Length = 520
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
+QE +R++A + V T+D+ V+ LR+LGEPI LFGE ERR RLR L+ L+
Sbjct: 74 VQELLQRRRAYAMAVPTNDSAVRARLRRLGEPITLFGEREMERRDRLRALMVRLE 128
>gi|240275501|gb|EER39015.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Ajellomyces capsulatus
H143]
gi|325091338|gb|EGC44648.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Ajellomyces capsulatus
H88]
Length = 546
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
A+L +F RR++A + V T+D++V+ LR+LG PI LFGE +RR RLR+LL+ L+
Sbjct: 47 AILSQFSRRRRAAAIAVPTEDSRVRARLRELGHPITLFGEDATDRRDRLRELLTDLE 103
>gi|414866854|tpg|DAA45411.1| TPA: hypothetical protein ZEAMMB73_640829 [Zea mays]
Length = 525
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 55 DDEMAKDK-QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLR 113
D A+++ + +QE +R++A + V T+D+ V+ LR+LGEPI LFGE ERR RLR
Sbjct: 68 DHRAARERHERAVQELLQRRRAYAMAVPTNDSAVRARLRRLGEPITLFGEREMERRDRLR 127
Query: 114 DLLSSLQ 120
L+ L+
Sbjct: 128 ALMVRLE 134
>gi|226528469|ref|NP_001146287.1| uncharacterized protein LOC100279862 [Zea mays]
gi|219886513|gb|ACL53631.1| unknown [Zea mays]
Length = 525
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 55 DDEMAKDK-QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLR 113
D A+++ + +QE +R++A + V T+D+ V+ LR+LGEPI LFGE ERR RLR
Sbjct: 68 DHRAARERHERAVQELLQRRRAYAMAVPTNDSAVRARLRRLGEPITLFGEREMERRDRLR 127
Query: 114 DLLSSLQ 120
L+ L+
Sbjct: 128 ALMVRLE 134
>gi|258575643|ref|XP_002542003.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902269|gb|EEP76670.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 537
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 28 RLAANKDVDDDQEKYTNVHTSNVYMEIDDEM-------AKDK-QALLQEFERRKKARHVN 79
R A +D DD E V +N+ M+ D E+ A +K A+L +F R+++A +
Sbjct: 5 RRAYVEDATDDTE-MGGVDLANIPMDRDYELPASAAGIAPEKASAILSQFSRKRRAAAIP 63
Query: 80 VSTDDNQVKLNLRQLGEPICLFGE 103
V TDD +V++ LR+LG PI LFGE
Sbjct: 64 VPTDDGRVRVRLRELGHPITLFGE 87
>gi|255578471|ref|XP_002530100.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Ricinus
communis]
gi|223530411|gb|EEF32299.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Ricinus
communis]
Length = 541
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 62 KQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+Q LQ+ +++A + V T+D V+ LR+LGEPI LFGE ERR RLR L++ L
Sbjct: 90 QQKALQDLMMKRRAAALAVPTNDKAVRARLRRLGEPITLFGEREMERRDRLRMLMAKL 147
>gi|225441355|ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
protein-like [Vitis vinifera]
Length = 577
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 67 QEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
QEF +++A + V T+D V+ LR+LGEPI LFGE ERR RLR +++ L
Sbjct: 131 QEFLMKRRASALAVPTNDMAVRTRLRRLGEPITLFGEREMERRDRLRMIMAKL 183
>gi|168010281|ref|XP_001757833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691109|gb|EDQ77473.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 492
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 62 KQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
K+ L+Q+ R++A + V T+D+ V+ LR LG PI LFGE ERR RLR +++ L
Sbjct: 21 KEQLVQQLLMRRRATALAVPTNDSAVRQRLRHLGHPITLFGEREMERRDRLRAVMAKL 78
>gi|154283543|ref|XP_001542567.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410747|gb|EDN06135.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 271
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
A+L +F RR++A + V T+D++V+ LR+LG PI LFGE +RR RLR+LL+ L+
Sbjct: 47 AILSQFSRRRRAAAIAVPTEDSRVRARLRELGHPITLFGEDATDRRDRLRELLTDLE 103
>gi|145501657|ref|XP_001436809.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403953|emb|CAK69412.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 21 LEEQERKRLAAN-KDVDDDQEKYTNV----HTSNVYMEIDDEMAKDKQALLQEFERRKK- 74
L++QER+R+ N + + V S ++ E +Q +E ER++K
Sbjct: 3 LQQQERQRVTDNLSQISQLSTRAPTVINQQQESLPFISYTTENVDRQQKQQEENERKQKL 62
Query: 75 ---ARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
AR + V T ++Q+K LRQLG+P+ FGE A+RR RLR LL+
Sbjct: 63 MAEARKLMVPTQESQIKSQLRQLGQPVTYFGESAADRRQRLRTLLT 108
>gi|294891385|ref|XP_002773553.1| wd-repeat protein, putative [Perkinsus marinus ATCC 50983]
gi|239878725|gb|EER05369.1| wd-repeat protein, putative [Perkinsus marinus ATCC 50983]
Length = 539
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+E + K V D +VK LR +GEPICLFGE PA+RR RL+ LLS
Sbjct: 58 FEEVRKTKGDLSAAVPGSDREVKNKLRLIGEPICLFGEDPADRRGRLKLLLS 109
>gi|195171443|ref|XP_002026515.1| GL20594 [Drosophila persimilis]
gi|194111421|gb|EDW33464.1| GL20594 [Drosophila persimilis]
Length = 377
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 57/135 (42%)
Query: 1 MSDDEDVIYVKKQNTVHYGSLEEQERKR-------------------------------- 28
MSDD+D+ Y+K+Q T+HYGSLEE ERKR
Sbjct: 1 MSDDDDIQYIKRQRTIHYGSLEETERKRQNAGGASSAANAATAASATTPSQTSGAAAATP 60
Query: 29 -----------LAANKDVDDDQEKYTNVHTS-------NVYMEIDD-------EMAKDKQ 63
+ +++D ++ +K ++ S ++ +I+D EM +DK
Sbjct: 61 AATAPPAQLEDIESDEDYEEPSKKVSSTKASLPPPTAASLANKINDDYFDLETEMERDKV 120
Query: 64 ALLQEFERRKKARHV 78
ALL+EFER+K+AR +
Sbjct: 121 ALLEEFERKKRARQI 135
>gi|443897959|dbj|GAC75297.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Pseudozyma antarctica
T-34]
Length = 487
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
AL + RK AR++ V T D +V+L LR+LGEP+ FGE +RR RLR +L+
Sbjct: 32 ALSAHIDARKIARNLAVPTSDPKVRLRLRELGEPVTCFGEREMDRRERLRQVLA 85
>gi|294876495|ref|XP_002767687.1| hypothetical protein Pmar_PMAR020792 [Perkinsus marinus ATCC 50983]
gi|239869470|gb|EER00405.1| hypothetical protein Pmar_PMAR020792 [Perkinsus marinus ATCC 50983]
Length = 224
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+E + K V D +VK LR +GEPICLFGE PA+RR RL+ LLS
Sbjct: 12 FEEVRKTKGDLSAAVPGSDREVKNKLRLIGEPICLFGEDPADRRGRLKLLLS 63
>gi|296005488|ref|XP_002809064.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|225632008|emb|CAX64345.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 648
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 34 DVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHV--NVSTDDNQVKLNL 91
DV D + Y N + M I++ +K+ LL+EFE R K R V + T D VK L
Sbjct: 5 DVLHDYKLYDNTKKKSSEMVINEN--DNKERLLEEFEIRSKVRKVCLGIPTQDIDVKNIL 62
Query: 92 RQLGEPICLFGEGPAERRSRLRDLL 116
R L EPICLFGE ++R RL+++L
Sbjct: 63 RLLKEPICLFGEDSYDKRKRLKNIL 87
>gi|406606005|emb|CCH42642.1| putative WD repeat-containing protein [Wickerhamomyces ciferrii]
Length = 453
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
LQ+ E ++ A + TDD++VK LR LGEPI FGE A+RR RL +L+ S
Sbjct: 27 FLQQLENKRTANLRLIPTDDDEVKAMLRSLGEPIIYFGEDKADRRERLTELVVS 80
>gi|260950639|ref|XP_002619616.1| hypothetical protein CLUG_00775 [Clavispora lusitaniae ATCC 42720]
gi|238847188|gb|EEQ36652.1| hypothetical protein CLUG_00775 [Clavispora lusitaniae ATCC 42720]
Length = 476
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 70 ERRKKARHVN--VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+R K R ++ + TDD +V+ LR+LGEPI LFGEG AERR RL L+S
Sbjct: 11 DRGKTDRQISLLIPTDDQEVRSELRKLGEPITLFGEGKAERRERLVRLVS 60
>gi|393222214|gb|EJD07698.1| WD40 repeat-like protein [Fomitiporia mediterranea MF3/22]
Length = 468
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
V TDD +V+ LR++GEPI LFGE PA+RR RL+ +LS +
Sbjct: 3 VPTDDARVRARLREIGEPITLFGERPADRRDRLKYVLSQI 42
>gi|356534706|ref|XP_003535893.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
protein-like [Glycine max]
Length = 570
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+QE +++A + V T+D V+ LR LGEPI LFGE ERR RLR +++ L
Sbjct: 126 MQELMMKRRAAALAVPTNDMAVRARLRHLGEPITLFGEREMERRDRLRMIMAKL 179
>gi|396472377|ref|XP_003839092.1| similar to U4/U6 small nuclear ribonucleoprotein Prp4
[Leptosphaeria maculans JN3]
gi|312215661|emb|CBX95613.1| similar to U4/U6 small nuclear ribonucleoprotein Prp4
[Leptosphaeria maculans JN3]
Length = 515
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 60 KDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPA 106
++ L+ EF+R+++A + V T D VK LR LGEPI LFGEGP+
Sbjct: 43 QNAATLMDEFDRKRRAAQLIVPTADRHVKAKLRSLGEPITLFGEGPS 89
>gi|71022699|ref|XP_761579.1| hypothetical protein UM05432.1 [Ustilago maydis 521]
gi|46101257|gb|EAK86490.1| hypothetical protein UM05432.1 [Ustilago maydis 521]
Length = 517
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLR 113
AL + + RK AR++ + T D +V+L LRQLG PI FGE +RR RLR
Sbjct: 47 ALSAQLDARKMARNLAIPTSDAKVRLRLRQLGHPITCFGEREMDRRQRLR 96
>gi|302852727|ref|XP_002957882.1| hypothetical protein VOLCADRAFT_84238 [Volvox carteri f.
nagariensis]
gi|300256759|gb|EFJ41018.1| hypothetical protein VOLCADRAFT_84238 [Volvox carteri f.
nagariensis]
Length = 474
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 39/54 (72%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
A L+EFE R+K R V V TDD +V+ LRQLGEP+ LFGE ERR RL+ +++
Sbjct: 20 AKLREFELRRKIRQVVVPTDDGKVRQLLRQLGEPVTLFGEREMERRERLKRIIA 73
>gi|326491527|dbj|BAJ94241.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508748|dbj|BAJ95896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 504
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
+QE +R++A + V T+D+ V+ LR+L EPI LFGE ERR RLR L+ L+
Sbjct: 61 VQELLQRRRAYAMAVPTNDSAVRTRLRRLSEPITLFGEREMERRDRLRALMVRLE 115
>gi|303321510|ref|XP_003070749.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110446|gb|EER28604.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040220|gb|EFW22153.1| pre-mRNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 541
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERR 109
A+L +F R+++A + V TDD +V+ LR+LG PI LFGE +RR
Sbjct: 48 AILSQFSRKRRAAAIPVPTDDGRVRSRLRELGHPITLFGEDATDRR 93
>gi|167393569|ref|XP_001740631.1| WD repeat-containing protein [Entamoeba dispar SAW760]
gi|165895204|gb|EDR22951.1| WD repeat-containing protein, putative [Entamoeba dispar SAW760]
Length = 426
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+++ E + K R + + T+D V L LR+LGEPI LFGE RR RLRD L+ +
Sbjct: 14 IKKLEEKWKYRKIPLPTEDKMVMLRLRELGEPIMLFGEEFESRRERLRDALAKV 67
>gi|452824514|gb|EME31516.1| PRP4 pre-mRNA processing factor 4-like protein [Galdieria
sulphuraria]
Length = 520
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+L+EFER+++AR + + TDD QV+ LR+ P+ LFGE +RR RLR +L+
Sbjct: 38 VLEEFERKREARGILLPTDDVQVRKELRKRQVPVTLFGEDAYDRRERLRLILA 90
>gi|407039681|gb|EKE39768.1| WD domain, G-beta repeat-containing protein [Entamoeba nuttalli
P19]
Length = 426
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+++ E + K R + + T+D V L LR+LGEPI LFGE RR RLRD L+ +
Sbjct: 14 IRKLEEKWKYRKIPLPTEDKMVMLRLRELGEPIMLFGEEFESRRERLRDALAKV 67
>gi|67471866|ref|XP_651845.1| WD domain containing protein [Entamoeba histolytica HM-1:IMSS]
gi|56468624|gb|EAL46455.1| WD domain containing protein [Entamoeba histolytica HM-1:IMSS]
gi|449702783|gb|EMD43353.1| WD repeatcontaining protein [Entamoeba histolytica KU27]
Length = 426
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+ + E + K R + + T+D V L LR+LGEPI LFGE RR RLRD L+ +
Sbjct: 14 IMKLEEKWKYRKIPLPTEDKMVMLRLRELGEPIMLFGEEFESRRERLRDALAKV 67
>gi|218188637|gb|EEC71064.1| hypothetical protein OsI_02814 [Oryza sativa Indica Group]
Length = 626
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 55 DDEMAKDK-QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLR 113
D A+++ + ++QE +R++ + V T+D V+ LR+LGEP+ LFGE E + RLR
Sbjct: 458 DHRAARERHECVVQELLQRRRTFAMAVPTNDFAVRARLRRLGEPVTLFGEREMESQDRLR 517
Query: 114 DLLSSLQ 120
L+ L+
Sbjct: 518 ALMVCLE 524
>gi|412988012|emb|CCO19408.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Bathycoccus prasinos]
Length = 608
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 36 DDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLG 95
D+D++K TS + IDD ++ + + + T D +VK LR L
Sbjct: 29 DEDEDK-----TSKNRLRIDDH--RNASSSFTPPLPALDDLLLPLPTSDREVKERLRSLD 81
Query: 96 EPICLFGEGPAERRSRLRDLLSSL 119
EPICLFGEG AERR RL+ LS+
Sbjct: 82 EPICLFGEGKAERRERLKRTLSAF 105
>gi|209875825|ref|XP_002139355.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Cryptosporidium muris
RN66]
gi|209554961|gb|EEA05006.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative
[Cryptosporidium muris RN66]
Length = 454
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
V V T+D+ VK LR LG PIC FGEGP ERR RL ++
Sbjct: 8 VTVPTNDDVVKATLRTLGHPICYFGEGPYERRIRLSTII 46
>gi|34809970|pdb|1MZW|B Chain B, Crystal Structure Of A U4U6 SNRNP COMPLEX BETWEEN HUMAN
Spliceosomal Cyclophilin H And A U4U6-60k Peptide
Length = 31
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/31 (74%), Positives = 27/31 (87%)
Query: 86 QVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+VK +LR LGEPI LFGEGPAERR RLR++L
Sbjct: 1 EVKASLRALGEPITLFGEGPAERRERLRNIL 31
>gi|15227373|ref|NP_181681.1| U4/U6 small nuclear ribonucleoprotein PRP4-like protein
[Arabidopsis thaliana]
gi|3123130|sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclear ribonucleoprotein PRP4-like
protein; AltName: Full=Protein EMBRYO DEFECTIVE 2776
gi|2618685|gb|AAB84332.1| putative small nuclear ribonucleoprotein Prp4p [Arabidopsis
thaliana]
gi|20197202|gb|AAM14969.1| putative small nuclear ribonucleoprotein Prp4p [Arabidopsis
thaliana]
gi|58652074|gb|AAW80862.1| At2g41500 [Arabidopsis thaliana]
gi|330254897|gb|AEC09991.1| U4/U6 small nuclear ribonucleoprotein PRP4-like protein
[Arabidopsis thaliana]
Length = 554
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
LQ+ +++A + V T+D V+ LR+LGEPI LFGE ERR+RL LL+
Sbjct: 105 LQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPITLFGEQEMERRARLTQLLT 156
>gi|452847952|gb|EME49884.1| hypothetical protein DOTSEDRAFT_50058 [Dothistroma septosporum
NZE10]
Length = 525
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 57 EMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
E ++ ++L EF R++KA + V TDD +V+ LR GEPI LFGE +RR RLR L+
Sbjct: 41 EPSQHTASVLGEFARKRKAAALAVPTDDQRVRTELRARGEPITLFGERKEDRRDRLRSLM 100
Query: 117 SSLQ 120
S Q
Sbjct: 101 LSEQ 104
>gi|30794128|gb|AAP40506.1| putative small nuclear ribonucleoprotein Prp4p [Arabidopsis
thaliana]
gi|110738927|dbj|BAF01385.1| putative U4/U6 small nuclear ribonucleoprotein [Arabidopsis
thaliana]
Length = 554
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
LQ+ +++A + V T+D V+ LR+LGEPI LFGE ERR+RL LL+
Sbjct: 105 LQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPITLFGEQEMERRARLTQLLT 156
>gi|399217292|emb|CCF73979.1| unnamed protein product [Babesia microti strain RI]
Length = 506
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 66 LQEFERRKKARHVNVS--TDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
L+EFE R + V ++ T DN ++ LR L EPI LFGEG ERR R + L+
Sbjct: 13 LKEFELRSRLSSVTIAVPTLDNSIRWILRSLKEPIHLFGEGKFERRERTKSLI 65
>gi|384252005|gb|EIE25482.1| WD40 repeat-like protein [Coccomyxa subellipsoidea C-169]
Length = 454
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 62 KQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
++ +++ E R++ R V T D +V+ LR L EP+ LFGE ERR RLR LL+ +
Sbjct: 11 QEEAVRQMELRRRMRAAVVPTQDAEVRRTLRLLKEPVTLFGEREMERRDRLRKLLAEM 68
>gi|294657120|ref|XP_459437.2| DEHA2E02398p [Debaryomyces hansenii CBS767]
gi|199432460|emb|CAG87651.2| DEHA2E02398p [Debaryomyces hansenii CBS767]
Length = 495
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 79 NVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+V T D +V++ LR+LGEPI FGEG AERR RL L+S L
Sbjct: 25 DVPTIDEEVRMELRRLGEPITYFGEGKAERRERLIKLVSEL 65
>gi|297827793|ref|XP_002881779.1| hypothetical protein ARALYDRAFT_483227 [Arabidopsis lyrata subsp.
lyrata]
gi|297327618|gb|EFH58038.1| hypothetical protein ARALYDRAFT_483227 [Arabidopsis lyrata subsp.
lyrata]
Length = 552
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
LQ+ +++A + V T+D V+ LR+LG+PI LFGE ERR+RL LL+ L
Sbjct: 101 LQDLLVKRRAAAMAVPTNDKAVRDRLRRLGQPITLFGEQEMERRARLTQLLARL 154
>gi|189203063|ref|XP_001937867.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187984966|gb|EDU50454.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 515
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 64 ALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPA 106
+L+++F+R+++A + V T D VK LR GEPI LFGEGP+
Sbjct: 47 SLMEDFDRKRRAAQLIVPTADRDVKARLRARGEPITLFGEGPS 89
>gi|356500553|ref|XP_003519096.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
protein-like [Glycine max]
Length = 570
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+QE +++A + V T+D V+ LR LGE I LFGE ERR RLR +++ L
Sbjct: 126 MQELMMKRRAAALAVPTNDMAVRARLRHLGEAITLFGEREMERRDRLRMIMAKL 179
>gi|403220827|dbj|BAM38960.1| U4/U6 small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 528
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 65 LLQEFERRKKAR--HVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
++++FE + H+ ++T+D +K R L EPI LFGEG ERR RL+ LL S
Sbjct: 17 VMKQFELKSNMSNLHIGITTNDVVIKRIFRALLEPIILFGEGNYERRERLKKLLLS 72
>gi|67624349|ref|XP_668457.1| WD-40 repeat protein family / small nuclear ribonucleoprotein
Prp4p-related [Cryptosporidium hominis TU502]
gi|54659670|gb|EAL38237.1| WD-40 repeat protein family / small nuclear ribonucleoprotein
Prp4p-related [Cryptosporidium hominis]
Length = 439
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
VST+D VKL LR+LGEPIC FGE RR RL +L+
Sbjct: 10 VSTNDEIVKLQLRELGEPICYFGEDQYRRRERLSNLI 46
>gi|126649177|ref|XP_001388261.1| WD-40 repeat protein family / small nuclear ribonucleoprotein
Prp4p-related [Cryptosporidium parvum Iowa II]
gi|126117183|gb|EAZ51283.1| WD-40 repeat protein family / small nuclear ribonucleoprotein
Prp4p-related [Cryptosporidium parvum Iowa II]
Length = 439
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
VST+D VKL LR+LGEPIC FGE RR RL +L+
Sbjct: 10 VSTNDEIVKLQLRELGEPICYFGEDQYRRRERLSNLI 46
>gi|125586281|gb|EAZ26945.1| hypothetical protein OsJ_10872 [Oryza sativa Japonica Group]
gi|218192844|gb|EEC75271.1| hypothetical protein OsI_11600 [Oryza sativa Indica Group]
Length = 433
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
V T+D+ V+ LR+LGEP+ LFGE ERR RLR L+ L+
Sbjct: 3 VPTNDSAVRARLRRLGEPVTLFGEREMERRDRLRALMVRLE 43
>gi|302761332|ref|XP_002964088.1| hypothetical protein SELMODRAFT_81344 [Selaginella moellendorffii]
gi|300167817|gb|EFJ34421.1| hypothetical protein SELMODRAFT_81344 [Selaginella moellendorffii]
Length = 525
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 72 RKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+++A + V T D VK LRQ+G+P+ LFGE ERR RLR L++
Sbjct: 54 QRRAAALAVPTSDAAVKEKLRQMGQPVTLFGEREMERRDRLRYLMA 99
>gi|302787324|ref|XP_002975432.1| hypothetical protein SELMODRAFT_442802 [Selaginella moellendorffii]
gi|300157006|gb|EFJ23633.1| hypothetical protein SELMODRAFT_442802 [Selaginella moellendorffii]
Length = 525
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 72 RKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+++A + V T D VK LRQ+G+P+ LFGE ERR RLR L++
Sbjct: 54 QRRAAALAVPTSDAAVKEKLRQMGQPVTLFGEREMERRDRLRYLMA 99
>gi|398411634|ref|XP_003857155.1| hypothetical protein MYCGRDRAFT_31393 [Zymoseptoria tritici IPO323]
gi|339477040|gb|EGP92131.1| hypothetical protein MYCGRDRAFT_31393 [Zymoseptoria tritici IPO323]
Length = 522
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 59 AKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+++ + EF R+++A + V TDD +V+ LR GEPI LFGE +RR RLR+LL
Sbjct: 40 SQNAAIVFDEFARKRRAAALAVPTDDLRVRTELRARGEPITLFGERKEDRRDRLRELL 97
>gi|219124130|ref|XP_002182364.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406325|gb|EEC46265.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 484
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 63 QALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
QA+L + E +K A ++V T QV+ LR++G+P+ LFGE A+ R RLR+ ++
Sbjct: 29 QAMLLDLEAKKIAASLDVPTLPEQVRAALREMGQPVRLFGENLADVRQRLREAMA 83
>gi|156083054|ref|XP_001609011.1| WD domain, G-beta repeat domain containing protein [Babesia bovis
T2Bo]
gi|154796261|gb|EDO05443.1| WD domain, G-beta repeat domain containing protein [Babesia bovis]
Length = 524
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 66 LQEFERRKKAR--HVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
++EFE + K H+ ++T+D +V LR L EPI LFGEG ERR RL+ +L
Sbjct: 19 MKEFELKSKLHSIHLGITTNDLEVIRILRALIEPITLFGEGKYERRERLKKVL 71
>gi|397613233|gb|EJK62098.1| hypothetical protein THAOC_17304 [Thalassiosira oceanica]
Length = 573
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 51 YMEIDDEMAKDKQAL---LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAE 107
Y+E+ + +QA L + E RK+A ++V T + V+ LR LGEPI LFGE A
Sbjct: 7 YLELTSDSLAARQAHRNKLLDMEARKRAATIDVPTLPSDVRDALRNLGEPIRLFGEDLAA 66
Query: 108 RRSRLRDLLS 117
R RLR +L+
Sbjct: 67 IRERLRMILA 76
>gi|440294521|gb|ELP87538.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Entamoeba
invadens IP1]
Length = 441
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
+++ E + K R + + TDD + L LR++GEPI LF E +RR RLR+ L+ +
Sbjct: 14 IRKLEEKWKFRKIPLPTDDRLIMLRLREIGEPIKLFSESFEDRRERLRNSLTKV 67
>gi|290999931|ref|XP_002682533.1| predicted protein [Naegleria gruberi]
gi|284096160|gb|EFC49789.1| predicted protein [Naegleria gruberi]
Length = 605
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+ T D V+L LR++GEP+ LFGEG +ERR RL+ +++
Sbjct: 29 IPTIDLDVRLKLREMGEPMTLFGEGSSERRERLKRMIA 66
>gi|146421572|ref|XP_001486731.1| hypothetical protein PGUG_00108 [Meyerozyma guilliermondii ATCC
6260]
Length = 465
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
V DD +VK LR+LGEP+ +GEGP RR RL+++L
Sbjct: 25 VPEDDEEVKRLLRKLGEPVTNYGEGPGRRRERLKNVL 61
>gi|190344349|gb|EDK36010.2| hypothetical protein PGUG_00108 [Meyerozyma guilliermondii ATCC
6260]
Length = 465
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
V DD +VK LR+LGEP+ +GEGP RR RL+++L
Sbjct: 25 VPEDDEEVKRLLRKLGEPVTNYGEGPGRRRERLKNVL 61
>gi|156096366|ref|XP_001614217.1| WD domain, G-beta repeat domain containing protein [Plasmodium
vivax Sal-1]
gi|148803091|gb|EDL44490.1| WD domain, G-beta repeat domain containing protein [Plasmodium
vivax]
Length = 644
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 65 LLQEFERRKKARHV--NVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+L+EFE + K R V + T + VK LR L EPICLFGE ++R RL+ +L
Sbjct: 44 VLEEFEIKSKMRKVCLGIPTKELDVKNILRLLKEPICLFGEDSYDKRKRLKSVL 97
>gi|429328293|gb|AFZ80053.1| WD domain, G-beta repeat family protein [Babesia equi]
Length = 525
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 55 DDEMAKDKQALLQEFERRKKAR--HVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRL 112
D E + +L+E E + K ++ V+T+D+ VK R L EPI LFGEG ERR RL
Sbjct: 8 DTETSNLDGEVLKELELKSKLSNLYIGVTTNDSVVKKIFRSLKEPIILFGEGSYERRERL 67
Query: 113 RDLL 116
+ +L
Sbjct: 68 KMVL 71
>gi|299471181|emb|CBN79037.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 616
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 44 NVHTSNVYMEIDDEMAKDKQA------LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEP 97
N+H + EI D + K+A LL++ E ++AR + V T V LRQLG+P
Sbjct: 65 NIHQQE-HTEIMDLSEESKEAQQEHARLLKQVEADRRARTMVVPTKTEDVAKKLRQLGQP 123
Query: 98 ICLFGEGPAERRSRLRDLLSS 118
+ LF E A+ R RLR +++
Sbjct: 124 VRLFSENVADIRERLRRFIAA 144
>gi|342320326|gb|EGU12267.1| U4/U6 snRNP-specific spliceosomal protein [Rhodotorula glutinis
ATCC 204091]
Length = 438
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 34 DVDDDQEKYTNVHTSNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQ 93
D DD + + ++ TS + E LL E +R+K AR + + T+D +V+ LR+
Sbjct: 7 DFDDIESREVDLATSASHPE--------TARLLSELDRKKLARKIALPTNDGEVRARLRE 58
Query: 94 LGEPICLFG 102
LGEPI LF
Sbjct: 59 LGEPITLFA 67
>gi|145530592|ref|XP_001451068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418712|emb|CAK83671.1| unnamed protein product [Paramecium tetraurelia]
Length = 246
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 74 KARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+AR + V T +N++K LRQLG+ + FGEG A+R RL LL+
Sbjct: 3 EARKLMVPTQENEIKSQLRQLGQLVTYFGEGAADRGQRLHSLLT 46
>gi|340500535|gb|EGR27403.1| u4 u6 small nuclear ribonucleoprotein, putative [Ichthyophthirius
multifiliis]
Length = 432
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLR 113
+ V T+D VK LRQLG+PIC FGE +RR RL+
Sbjct: 1 MTVPTNDKDVKNRLRQLGQPICYFGENNVDRRERLK 36
>gi|452989468|gb|EME89223.1| hypothetical protein MYCFIDRAFT_25537 [Pseudocercospora fijiensis
CIRAD86]
Length = 517
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 39 QEKYTNVHTSNVYMEIDDEMAKDKQA--LLQEFERRKKARHVNVSTDDNQVKLNLRQLGE 96
+E+ + V +N Y D + + A +L EF R+++A + V TDD +V+ LR GE
Sbjct: 12 EEEVSTVSNTN-YQIRDPNTGQSQHASTVLGEFARKRRANALAVPTDDARVRQELRSRGE 70
Query: 97 PICLFGE 103
PI LFGE
Sbjct: 71 PITLFGE 77
>gi|393240411|gb|EJD47937.1| WD40 repeat-like protein [Auricularia delicata TFB-10046 SS5]
Length = 443
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
V TDD +V+ LR++GEPI LFGE +RR RL +LS +
Sbjct: 3 VPTDDGRVRARLREIGEPITLFGERAPDRRDRLIYVLSQI 42
>gi|448121572|ref|XP_004204240.1| Piso0_000070 [Millerozyma farinosa CBS 7064]
gi|358349779|emb|CCE73058.1| Piso0_000070 [Millerozyma farinosa CBS 7064]
Length = 502
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 79 NVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+V T D++V+ LR LGEPI FGE AERR RL LL
Sbjct: 25 DVPTSDDEVRQALRNLGEPITYFGEAKAERRERLIKLL 62
>gi|387219749|gb|AFJ69583.1| u4 u6 small nuclear ribonucleoprotein prp4, partial
[Nannochloropsis gaditana CCMP526]
Length = 125
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 59 AKDKQA-LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRD 114
A+ +QA LL++ E K+ R + V T ++V LR G+PI LFGE A+RR RLR+
Sbjct: 10 AQGRQAMLLRKLEAEKRKRGLVVPTKPSEVIDMLRDHGQPITLFGEAAADRRERLRE 66
>gi|125571133|gb|EAZ12648.1| hypothetical protein OsJ_02563 [Oryza sativa Japonica Group]
Length = 225
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 65 LLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
++QE +R++ + V T+D V+ LR+LGEP+ LFGE E + RLR L+ L+
Sbjct: 69 VVQELLQRRRTFAMAVPTNDFAVRARLRRLGEPVTLFGEREMESQDRLRALMVCLE 124
>gi|448123940|ref|XP_004204793.1| Piso0_000070 [Millerozyma farinosa CBS 7064]
gi|358249426|emb|CCE72492.1| Piso0_000070 [Millerozyma farinosa CBS 7064]
Length = 502
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 79 NVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
NV T D++V+ LR +GEPI FGE A+RR RL L+S
Sbjct: 25 NVPTSDDEVRQALRNMGEPITYFGEDKADRRERLIKLVS 63
>gi|164655911|ref|XP_001729084.1| hypothetical protein MGL_3872 [Malassezia globosa CBS 7966]
gi|159102973|gb|EDP41870.1| hypothetical protein MGL_3872 [Malassezia globosa CBS 7966]
Length = 248
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 69 FERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
E+RK A+ V V T D V+ LR+ EP+ LFGE A+RR+RL +L
Sbjct: 44 LEQRKLAQQVPVPTSDIHVRETLRRYDEPVTLFGEHEADRRARLLGVL 91
>gi|221058541|ref|XP_002259916.1| homo sapiens riken cDNA 1600015h11 gene-related [Plasmodium
knowlesi strain H]
gi|193809989|emb|CAQ41183.1| homo sapiens riken cDNA 1600015h11 gene-related,putative
[Plasmodium knowlesi strain H]
Length = 629
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 57 EMAKDKQALLQEFERRKKARHVN--VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRD 114
EM + AL +EFE + K R V+ + T + VK LR L EPICLFGE ++R RL+
Sbjct: 31 EMTSSENAL-EEFEMKSKMRKVSLGIPTKELDVKNILRLLKEPICLFGEDSYDKRKRLKS 89
Query: 115 LL 116
+L
Sbjct: 90 IL 91
>gi|50554175|ref|XP_504496.1| YALI0E28226p [Yarrowia lipolytica]
gi|49650365|emb|CAG80099.1| YALI0E28226p [Yarrowia lipolytica CLIB122]
Length = 452
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 67 QEFERRKKA---RHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
Q E++++A + ++V TDD V+ LR L EPI LF E A+RR+RL L+
Sbjct: 27 QLLEKQRRADILKKLHVPTDDKDVRAKLRSLNEPITLFAEDKADRRTRLGQLM 79
>gi|223992935|ref|XP_002286151.1| small nuclear ribonucleoprotein prp4 [Thalassiosira pseudonana
CCMP1335]
gi|220977466|gb|EED95792.1| small nuclear ribonucleoprotein prp4 [Thalassiosira pseudonana
CCMP1335]
Length = 463
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 61 DKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
+ +++L + E RK+A ++V T V+ LR LGEP+ +FGE A R RLR +L+
Sbjct: 15 EHRSMLLDLEARKRASTMDVPTLPADVRDALRSLGEPVRMFGEDLAAIRDRLRMVLA 71
>gi|385301717|gb|EIF45888.1| u4 u6 small nuclear ribonucleoprotein prp4 [Dekkera bruxellensis
AWRI1499]
Length = 298
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
V T D+ VK LR+ +PI FGEGP ERR RL + S
Sbjct: 11 VPTIDDDVKXVLRRFQQPIIYFGEGPLERRQRLIEFFS 48
>gi|82596043|ref|XP_726099.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481363|gb|EAA17664.1| Homo sapiens RIKEN cDNA 1600015H11 gene-related [Plasmodium yoelii
yoelii]
Length = 619
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 61 DKQALLQEFERRKKARHV--NVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+ ++L+EFE + K R V + T D +VK LR L EPICLF E ++R+RL+ +L
Sbjct: 29 NNDSILEEFEIKNKIRKVCLGIPTKDLEVKNILRLLKEPICLFAEDNYDKRNRLKHIL 86
>gi|389584899|dbj|GAB67630.1| WD domain G-beta repeat domain containing protein [Plasmodium
cynomolgi strain B]
Length = 432
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 63 QALLQEFERRKKARHV--NVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
+ +++EFE + K R V + T + VK LR L EPICLFGE ++R RL+ +L
Sbjct: 42 ENVMEEFEIKSKMRKVCLGIPTKELDVKNILRLLKEPICLFGEDSYDKRKRLKSVL 97
>gi|432140287|gb|AGB06081.1| RNA-binding protein, partial [Plasmodium vinckei vinckei]
Length = 183
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ + T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 1 LGIPTKDLEVKNVLRLLKEPICLFGEDQYDKRNRLKHILVT 41
>gi|432140267|gb|AGB06071.1| RNA-binding protein, partial [Plasmodium vinckei lentum]
Length = 184
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ + T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 2 LGIPTKDLEVKNVLRLLKEPICLFGEDQYDKRNRLKHILVT 42
>gi|432140229|gb|AGB06052.1| RNA-binding protein, partial [Plasmodium chabaudi adami]
gi|432140231|gb|AGB06053.1| RNA-binding protein, partial [Plasmodium chabaudi adami]
gi|432140247|gb|AGB06061.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
Length = 183
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ + T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 1 LGIPTKDVEVKNVLRLLKEPICLFGEDQYDKRNRLKRILVT 41
>gi|432140275|gb|AGB06075.1| RNA-binding protein, partial [Plasmodium vinckei]
gi|432140277|gb|AGB06076.1| RNA-binding protein, partial [Plasmodium vinckei]
gi|432140281|gb|AGB06078.1| RNA-binding protein, partial [Plasmodium vinckei]
gi|432140283|gb|AGB06079.1| RNA-binding protein, partial [Plasmodium vinckei]
Length = 182
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 2 IPTKDLEVKNVLRLLKEPICLFGEDQYDKRNRLKHILVT 40
>gi|432140263|gb|AGB06069.1| RNA-binding protein, partial [Plasmodium vinckei brucechwatti]
gi|432140265|gb|AGB06070.1| RNA-binding protein, partial [Plasmodium vinckei brucechwatti]
gi|432140269|gb|AGB06072.1| RNA-binding protein, partial [Plasmodium vinckei lentum]
gi|432140271|gb|AGB06073.1| RNA-binding protein, partial [Plasmodium vinckei petteri]
gi|432140273|gb|AGB06074.1| RNA-binding protein, partial [Plasmodium vinckei petteri]
gi|432140279|gb|AGB06077.1| RNA-binding protein, partial [Plasmodium vinckei]
Length = 182
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 2 IPTKDLEVKNVLRLLKEPICLFGEDQYDKRNRLKHILVT 40
>gi|213402073|ref|XP_002171809.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Schizosaccharomyces
japonicus yFS275]
gi|211999856|gb|EEB05516.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Schizosaccharomyces
japonicus yFS275]
Length = 475
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 48 SNVYMEIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAE 107
+ + E K++ A E ER + + V +D V+ LR L +P+ LFGE +
Sbjct: 12 TRAFTEGRTRATKEQAAYFAEKERETRLAELKVPVEDVGVREALRALKQPVTLFGENALD 71
Query: 108 RRSRLRDLL 116
RR RL+ L+
Sbjct: 72 RRLRLQQLM 80
>gi|432140235|gb|AGB06055.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
gi|432140253|gb|AGB06064.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
gi|432140259|gb|AGB06067.1| RNA-binding protein, partial [Plasmodium chabaudi]
Length = 183
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ + T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 1 LGIPTKDLEVKNVLRLLKEPICLFGEDQYDKRNRLKRILVT 41
>gi|432140285|gb|AGB06080.1| RNA-binding protein, partial [Plasmodium vinckei vinckei]
Length = 182
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 2 IPTKDLEVKNVLRLLKEPICLFGEDQYDKRNRLKHILVT 40
>gi|432140245|gb|AGB06060.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
Length = 182
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 2 IPTKDVEVKNVLRLLKEPICLFGEDQYDKRNRLKRILVT 40
>gi|150951674|ref|XP_001388029.2| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|149388793|gb|EAZ64006.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 485
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
V T D +V+ LR+LGEP+ FGE ++RR RL LLS
Sbjct: 25 VPTSDPEVRAELRKLGEPVTYFGEDDSDRRQRLIKLLS 62
>gi|432140241|gb|AGB06058.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
Length = 162
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 2 IPTKDLEVKNVLRLLKEPICLFGEDQYDKRNRLKRILVT 40
>gi|432140233|gb|AGB06054.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
gi|432140237|gb|AGB06056.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
gi|432140243|gb|AGB06059.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
gi|432140251|gb|AGB06063.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
gi|432140257|gb|AGB06066.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
gi|432140261|gb|AGB06068.1| RNA-binding protein, partial [Plasmodium chabaudi]
gi|432140289|gb|AGB06082.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
Length = 182
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 2 IPTKDLEVKNVLRLLKEPICLFGEDQYDKRNRLKRILVT 40
>gi|432140255|gb|AGB06065.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
Length = 182
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 2 IPTKDLEVKNVLRLLKEPICLFGEDQYDKRNRLKRILVT 40
>gi|432140249|gb|AGB06062.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
Length = 182
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 2 IPTKDLEVKNVLRLLKEPICLFGEDQYDKRNRLKRILVT 40
>gi|432140239|gb|AGB06057.1| RNA-binding protein, partial [Plasmodium chabaudi chabaudi]
Length = 161
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLFGE ++R+RL+ +L +
Sbjct: 2 IPTKDLEVKNVLRLLKEPICLFGEDQYDKRNRLKRILVT 40
>gi|432140321|gb|AGB06098.1| RNA-binding protein, partial [Plasmodium yoelii yoelii]
Length = 182
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ + T D +VK LR L EPICLF E ++R+RL+ +L +
Sbjct: 1 LGIPTKDLEVKNILRLLKEPICLFAEDNYDKRNRLKHILVT 41
>gi|432140299|gb|AGB06087.1| RNA-binding protein, partial [Plasmodium yoelii]
gi|432140303|gb|AGB06089.1| RNA-binding protein, partial [Plasmodium yoelii]
gi|432140307|gb|AGB06091.1| RNA-binding protein, partial [Plasmodium yoelii yoelii]
gi|432140319|gb|AGB06097.1| RNA-binding protein, partial [Plasmodium yoelii yoelii]
Length = 183
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ + T D +VK LR L EPICLF E ++R+RL+ +L +
Sbjct: 1 LGIPTKDLEVKNILRLLKEPICLFAEDNYDKRNRLKHILVT 41
>gi|432140301|gb|AGB06088.1| RNA-binding protein, partial [Plasmodium yoelii]
Length = 178
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLF E ++R+RL+ +L +
Sbjct: 2 IPTKDLEVKNILRLLKEPICLFAEDNYDKRNRLKHILVT 40
>gi|432140215|gb|AGB06045.1| RNA-binding protein, partial [Plasmodium berghei]
gi|432140217|gb|AGB06046.1| RNA-binding protein, partial [Plasmodium berghei]
gi|432140227|gb|AGB06051.1| RNA-binding protein, partial [Plasmodium berghei]
Length = 182
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ + T D +VK LR L EPICLF E ++R+RL+ +L +
Sbjct: 1 LGIPTKDLEVKNILRLLKEPICLFAEDNYDKRNRLKHILVT 41
>gi|432140317|gb|AGB06096.1| RNA-binding protein, partial [Plasmodium yoelii yoelii]
Length = 180
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLF E ++R+RL+ +L +
Sbjct: 2 IPTKDLEVKNILRLLKEPICLFAEDNYDKRNRLKHILVT 40
>gi|432140291|gb|AGB06083.1| RNA-binding protein, partial [Plasmodium yoelii nigeriensis]
gi|432140293|gb|AGB06084.1| RNA-binding protein, partial [Plasmodium yoelii killicki]
gi|432140297|gb|AGB06086.1| RNA-binding protein, partial [Plasmodium yoelii nigeriensis]
gi|432140305|gb|AGB06090.1| RNA-binding protein, partial [Plasmodium yoelii yoelii]
gi|432140313|gb|AGB06094.1| RNA-binding protein, partial [Plasmodium yoelii yoelii]
gi|432140323|gb|AGB06099.1| RNA-binding protein, partial [Plasmodium yoelii yoelii]
Length = 184
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ + T D +VK LR L EPICLF E ++R+RL+ +L +
Sbjct: 2 LGIPTKDLEVKNILRLLKEPICLFAEDNYDKRNRLKHILVT 42
>gi|432140219|gb|AGB06047.1| RNA-binding protein, partial [Plasmodium berghei]
gi|432140225|gb|AGB06050.1| RNA-binding protein, partial [Plasmodium berghei]
Length = 183
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 78 VNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ + T D +VK LR L EPICLF E ++R+RL+ +L +
Sbjct: 2 LGIPTKDLEVKNILRLLKEPICLFAEDNYDKRNRLKHILVT 42
>gi|432140295|gb|AGB06085.1| RNA-binding protein, partial [Plasmodium yoelii killicki]
gi|432140309|gb|AGB06092.1| RNA-binding protein, partial [Plasmodium yoelii yoelii]
gi|432140311|gb|AGB06093.1| RNA-binding protein, partial [Plasmodium yoelii yoelii]
gi|432140315|gb|AGB06095.1| RNA-binding protein, partial [Plasmodium yoelii yoelii]
Length = 182
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLF E ++R+RL+ +L +
Sbjct: 2 IPTKDLEVKNILRLLKEPICLFAEDNYDKRNRLKHILVT 40
>gi|432140213|gb|AGB06044.1| RNA-binding protein, partial [Plasmodium berghei]
gi|432140221|gb|AGB06048.1| RNA-binding protein, partial [Plasmodium berghei]
gi|432140223|gb|AGB06049.1| RNA-binding protein, partial [Plasmodium berghei]
Length = 181
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
+ T D +VK LR L EPICLF E ++R+RL+ +L +
Sbjct: 2 IPTKDLEVKNILRLLKEPICLFAEDNYDKRNRLKHILVT 40
>gi|19113878|ref|NP_592966.1| U4/U6 x U5 tri-snRNP complex subunit Prp4 family (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74698446|sp|Q9UTC7.1|YIDC_SCHPO RecName: Full=Uncharacterized WD repeat-containing protein C227.12
gi|6455915|emb|CAB61461.1| U4/U6 x U5 tri-snRNP complex subunit Prp4 family (predicted)
[Schizosaccharomyces pombe]
Length = 462
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 58 MAKDKQALLQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
K++ A E + + + + + + +D++V+ LR+ GEPI FGE RR RL+ L+
Sbjct: 24 FTKEQAAYYAEQKEKDRIKALKIPYEDSKVREYLRRYGEPITYFGEDALARRQRLQQLM 82
>gi|84999126|ref|XP_954284.1| u4/u6 small nuclear ribonucleoprotein [Theileria annulata]
gi|65305282|emb|CAI73607.1| u4/u6 small nuclear ribonucleoprotein, putative [Theileria
annulata]
Length = 544
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 57 EMAKDKQALLQEFERRKKAR--HVNVSTDDNQVKLNLRQLGEPICLFGEG 104
++ K A+L+EFE + H+ ++T+D +K R L EPI LFGEG
Sbjct: 25 QLLKVDPAVLKEFEMKSNMSNLHIGITTNDEVIKKIFRSLVEPITLFGEG 74
>gi|149235179|ref|XP_001523468.1| hypothetical protein LELG_05314 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452877|gb|EDK47133.1| hypothetical protein LELG_05314 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 443
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 68 EFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
EFE + V +D QVK L++LG+P+ + GE RR RL++LL+
Sbjct: 2 EFEDIPTINDIPVPDEDEQVKEELQRLGQPVFINGEDDDGRRERLKNLLN 51
>gi|164655560|ref|XP_001728909.1| hypothetical protein MGL_3903 [Malassezia globosa CBS 7966]
gi|159102797|gb|EDP41695.1| hypothetical protein MGL_3903 [Malassezia globosa CBS 7966]
Length = 239
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 82 TDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
+DD+ ++ LRQ GEPI LFGE ERR RLR L
Sbjct: 8 SDDDAIQ-RLRQKGEPIHLFGETSRERRMRLRSL 40
>gi|344233942|gb|EGV65812.1| WD40 repeat-like protein [Candida tenuis ATCC 10573]
Length = 489
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 79 NVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSSL 119
++ T D +V+ LR+L EPI FGE A+RRSRL ++ +
Sbjct: 33 SIPTSDAEVRSLLRKLKEPITYFGEDNADRRSRLIKFINEM 73
>gi|70934984|ref|XP_738640.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56515023|emb|CAH77167.1| hypothetical protein PC000040.02.0 [Plasmodium chabaudi chabaudi]
Length = 210
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 76 RHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
+H ++ + Q+ LRQL EPI LFGE +R +RL +L
Sbjct: 24 KHTGIALSNKQIITLLRQLKEPIRLFGETDLQRYNRLNEL 63
>gi|70937840|ref|XP_739674.1| pre-mRNA splicing factor protein [Plasmodium chabaudi chabaudi]
gi|56516845|emb|CAH84019.1| pre-mRNA splicing factor protein, putative [Plasmodium chabaudi
chabaudi]
Length = 235
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 76 RHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
+H ++ + Q+ LRQL EPI LFGE +R +RL +L
Sbjct: 13 KHTGIALSNKQIITLLRQLKEPIRLFGETDLQRYNRLNEL 52
>gi|357483873|ref|XP_003612223.1| U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Medicago
truncatula]
gi|355513558|gb|AES95181.1| U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Medicago
truncatula]
Length = 488
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 66 LQEFERRKKARHVNVSTDDNQVKLNLRQLGEPICLF 101
+Q+ R++A + + T+D V+ +LR LGEPI LF
Sbjct: 27 MQDLTMRRRAAALAIPTNDMAVRAHLRYLGEPITLF 62
>gi|124507002|ref|XP_001352098.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
gi|23505127|emb|CAD51909.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
Length = 343
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 77 HVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
++ ++ + Q+ + LRQL EPI LFGE +R +RL++L
Sbjct: 81 NIEITLSNKQIIMLLRQLKEPIRLFGETDLQRYNRLKEL 119
>gi|389583065|dbj|GAB65801.1| pre-mRNA splicing factor protein [Plasmodium cynomolgi strain B]
Length = 342
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
++ + Q+ + LRQL EPI LFGE ER +RL++L
Sbjct: 84 ITLTNRQIIILLRQLKEPIRLFGETDLERYNRLKEL 119
>gi|221054718|ref|XP_002258498.1| pre-mrna splicing factor protein [Plasmodium knowlesi strain H]
gi|193808567|emb|CAQ39270.1| pre-mrna splicing factor protein, putative [Plasmodium knowlesi
strain H]
Length = 342
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
++ + Q+ + LRQL EPI LFGE ER +RL++L
Sbjct: 84 ITLTNRQIIILLRQLKEPIRLFGETDLERYNRLKEL 119
>gi|156097452|ref|XP_001614759.1| pre-mRNA splicing factor protein [Plasmodium vivax Sal-1]
gi|148803633|gb|EDL45032.1| pre-mRNA splicing factor protein, putative [Plasmodium vivax]
Length = 342
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
++ + Q+ + LRQL EPI LFGE ER +RL++L
Sbjct: 84 ITLTNRQIIILLRQLKEPIRLFGETDLERYNRLKEL 119
>gi|71032723|ref|XP_766003.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352960|gb|EAN33720.1| hypothetical protein, conserved [Theileria parva]
Length = 528
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 64 ALLQEFERRKKAR--HVNVSTDDNQVKLNLRQLGEPICLFGEG 104
A+L+EFE + H+ ++T+D +K R L EPI LFGEG
Sbjct: 16 AVLKEFEMKSNMSNLHIGITTNDEVIKKIFRSLIEPITLFGEG 58
>gi|320584101|gb|EFW98313.1| pre-mRNA splicing factor, putative [Ogataea parapolymorpha DL-1]
Length = 428
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLS 117
V T D V+ L+ LGEP FGE A+RR RL DLL+
Sbjct: 13 VPTIDEDVRRVLQALGEPQTYFGEDKADRRERLVDLLA 50
>gi|68075127|ref|XP_679480.1| pre-mRNA splicing factor protein [Plasmodium berghei strain ANKA]
gi|56500242|emb|CAH93971.1| pre-mRNA splicing factor protein, putative [Plasmodium berghei]
Length = 285
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 80 VSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDL 115
++ + Q+ + LRQL EPI LFGE +R +RL++L
Sbjct: 27 IALSNKQIIIFLRQLKEPIRLFGETDLQRYNRLKEL 62
>gi|449296068|gb|EMC92088.1| hypothetical protein BAUCODRAFT_275782 [Baudoinia compniacensis
UAMH 10762]
Length = 358
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 84 DNQVKLNLRQLGEPICLFGEGPAERRSRLRDLLSS 118
D+++++NLR +GEP LFGE +R R R L ++
Sbjct: 125 DDELRMNLRDMGEPTVLFGETHLQRLRRYRKLTAA 159
>gi|323509131|dbj|BAJ77458.1| cgd7_5490 [Cryptosporidium parvum]
gi|323510423|dbj|BAJ78105.1| cgd7_5490 [Cryptosporidium parvum]
Length = 348
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 18/25 (72%)
Query: 91 LRQLGEPICLFGEGPAERRSRLRDL 115
LR LGEPI LFGE ER +RLR L
Sbjct: 115 LRLLGEPITLFGEDDNERYNRLRRL 139
>gi|301106368|ref|XP_002902267.1| pre-mRNA-splicing factor 18, putative [Phytophthora infestans
T30-4]
gi|262098887|gb|EEY56939.1| pre-mRNA-splicing factor 18, putative [Phytophthora infestans
T30-4]
Length = 350
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 18/23 (78%)
Query: 91 LRQLGEPICLFGEGPAERRSRLR 113
LR+LGEPI LFGE +R +RLR
Sbjct: 99 LRELGEPITLFGESMKDRMTRLR 121
>gi|330814803|ref|XP_003291420.1| hypothetical protein DICPUDRAFT_156019 [Dictyostelium purpureum]
gi|325078413|gb|EGC32066.1| hypothetical protein DICPUDRAFT_156019 [Dictyostelium purpureum]
Length = 357
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 91 LRQLGEPICLFGEGPAERRSRLRDL 115
LR+ G+PI FGE P +R SRL+ L
Sbjct: 98 LRERGQPITYFGETPKDRASRLKKL 122
>gi|66363452|ref|XP_628692.1| PRP18 (SFM+PRP18 domains) [Cryptosporidium parvum Iowa II]
gi|46229843|gb|EAK90661.1| PRP18 (SFM+PRP18 domains) [Cryptosporidium parvum Iowa II]
Length = 337
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 18/25 (72%)
Query: 91 LRQLGEPICLFGEGPAERRSRLRDL 115
LR LGEPI LFGE ER +RLR L
Sbjct: 104 LRLLGEPITLFGEDDNERYNRLRRL 128
>gi|443692217|gb|ELT93865.1| hypothetical protein CAPTEDRAFT_226664 [Capitella teleta]
Length = 9362
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 4 DEDVIYVKKQNTVHYGSLEEQERKRL-----AANKDVDDDQEKYTNVHTSNV--YMEIDD 56
D+ ++K+ ++ S E+QE+KR + NK +DD+ E+ H N+ + +
Sbjct: 8706 DQKKAELEKRLKKNHSSFEDQEKKRQQDELNSYNKQLDDEMEREKEKHKRNLDSLSKRKE 8765
Query: 57 EMAKDKQALLQE 68
EM KDK+ L+E
Sbjct: 8766 EMIKDKKDRLKE 8777
>gi|67516701|ref|XP_658236.1| hypothetical protein AN0632.2 [Aspergillus nidulans FGSC A4]
gi|40746019|gb|EAA65175.1| hypothetical protein AN0632.2 [Aspergillus nidulans FGSC A4]
gi|259489102|tpe|CBF89096.1| TPA: mRNA splicing factor (Prp18), putative (AFU_orthologue;
AFUA_1G16990) [Aspergillus nidulans FGSC A4]
Length = 371
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 91 LRQLGEPICLFGEGPAERRSRLRDLLS 117
LR++GEP+CLFGE +R R + LL+
Sbjct: 148 LREMGEPVCLFGETHRDRLRRYKKLLA 174
>gi|296416543|ref|XP_002837936.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633827|emb|CAZ82127.1| unnamed protein product [Tuber melanosporum]
Length = 346
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 90 NLRQLGEPICLFGEGPAERRSRLRDLLSSLQ 120
LR +GEP CLF E ++ RL+ LL++L+
Sbjct: 131 KLRSMGEPACLFAETHPQKVRRLKRLLAALE 161
>gi|255710435|ref|XP_002551501.1| KLTH0A00880p [Lachancea thermotolerans]
gi|238932878|emb|CAR21059.1| KLTH0A00880p [Lachancea thermotolerans CBS 6340]
Length = 471
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 68 EFERRKKARHVNVSTDDNQVKLNLRQLGEPICLFGEGPAERRSRLRDLL 116
EF+R +K V TDD +V+ +L LG+P L E +RR RL DLL
Sbjct: 35 EFDREQKL--TIVPTDDTEVRESLVHLGQPEALENESNRDRRDRLSDLL 81
>gi|453088837|gb|EMF16877.1| WD40 repeat-like protein [Mycosphaerella populorum SO2202]
Length = 537
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 37 DDQEKYTNVHTSNVYMEIDDEM--------AKDKQALLQEFERRKKARHVNVSTDDNQVK 88
+D+++ T + S+V ++ + + A+ + EF R++KA + V TDD +V+
Sbjct: 24 NDEKEDTTLDLSSVPLDTNYHLPATTIGGEAQHASTVFNEFARKRKAAALAVPTDDQRVR 83
Query: 89 LNLRQLGEPICLFGE 103
LR G PI LFGE
Sbjct: 84 TELRARGHPITLFGE 98
>gi|268537278|ref|XP_002633775.1| Hypothetical protein CBG03465 [Caenorhabditis briggsae]
Length = 352
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query: 53 EIDDEMAKDKQALLQEFERRKKARHVNVSTDDNQVKLN-----LRQLGEPICLFGEGPAE 107
+IDDE+ ++ + + K NV+ D +V ++ LRQ G+PI LFGE E
Sbjct: 57 KIDDEILRESSS------KTKVVPEENVAEFDEKVPMSDIHFRLRQRGQPILLFGESELE 110
Query: 108 RRSRLRDL 115
R RL L
Sbjct: 111 VRKRLHQL 118
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.130 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,796,893,726
Number of Sequences: 23463169
Number of extensions: 67814494
Number of successful extensions: 213948
Number of sequences better than 100.0: 552
Number of HSP's better than 100.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 170
Number of HSP's that attempted gapping in prelim test: 213368
Number of HSP's gapped (non-prelim): 648
length of query: 120
length of database: 8,064,228,071
effective HSP length: 87
effective length of query: 33
effective length of database: 6,022,932,368
effective search space: 198756768144
effective search space used: 198756768144
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)