BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11365
(95 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RAF0|NUDT4_PONAB Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Pongo
abelii GN=NUDT4 PE=2 SV=1
Length = 180
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 46/56 (82%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
+LLV+SSR P+ WIVPGGG+EPEEEP A+REV EEAGV GKLGR LG+FE + +
Sbjct: 34 VLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFENQDR 89
>sp|Q9NZJ9|NUDT4_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Homo
sapiens GN=NUDT4 PE=1 SV=2
Length = 180
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 46/56 (82%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
+LLV+SSR P+ WIVPGGG+EPEEEP A+REV EEAGV GKLGR LG+FE + +
Sbjct: 34 VLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFENQDR 89
>sp|Q99MY2|NUDT4_RAT Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Rattus
norvegicus GN=Nudt4 PE=2 SV=1
Length = 179
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 45/56 (80%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
+LLV+SSR P+ WIVPGGGVEPEEEP A REV EEAGV GKLGR LG+FE + +
Sbjct: 33 VLLVSSSRYPDQWIVPGGGVEPEEEPGGAAAREVYEEAGVKGKLGRLLGIFENQDR 88
>sp|Q8R2U6|NUDT4_MOUSE Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Mus
musculus GN=Nudt4 PE=1 SV=1
Length = 179
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 46/56 (82%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
+LLV+SSR P+ WIVPGGG+EPEEEP A+REV EEAGV GKLGR LG+FE + +
Sbjct: 33 VLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFENQDR 88
>sp|Q96G61|NUD11_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 3-beta OS=Homo
sapiens GN=NUDT11 PE=1 SV=1
Length = 164
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFE 89
+LLV+SSR P+ WIVPGGG+EPEEEP A+REV EEAGV GKLGR LGVFE
Sbjct: 33 VLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFE 84
>sp|Q8NFP7|NUD10_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 3-alpha OS=Homo
sapiens GN=NUDT10 PE=1 SV=1
Length = 164
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFE 89
+LLV+SSR P+ WIVPGGG+EPEEEP A+REV EEAGV GKLGR LGVFE
Sbjct: 33 VLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFE 84
>sp|P0C028|NUD11_MOUSE Diphosphoinositol polyphosphate phosphohydrolase 3-beta OS=Mus
musculus GN=Nudt11 PE=1 SV=1
Length = 164
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFE 89
+LLV+SSR P+ WIVPGGG+EPEEEP A+REV EEAGV GKLGR LGVFE
Sbjct: 33 VLLVSSSRYPDRWIVPGGGMEPEEEPDGAAVREVYEEAGVKGKLGRLLGVFE 84
>sp|P0C027|NUD10_MOUSE Diphosphoinositol polyphosphate phosphohydrolase 3-alpha OS=Mus
musculus GN=Nudt10 PE=1 SV=1
Length = 164
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFE 89
+LLV+SSR P+ WIVPGGG+EPEEEP A+REV EEAGV GKLGR LGVFE
Sbjct: 33 VLLVSSSRYPDRWIVPGGGMEPEEEPDGAAVREVYEEAGVKGKLGRLLGVFE 84
>sp|O95989|NUDT3_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Homo
sapiens GN=NUDT3 PE=1 SV=1
Length = 172
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
+LLV+SSR P+ WIVPGGG+EPEEEP+ A+REV EEAGV G LGR +G+FE + +
Sbjct: 34 VLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQER 89
>sp|Q566C7|NUDT3_RAT Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Rattus
norvegicus GN=Nudt3 PE=1 SV=1
Length = 168
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
+LLV+SSR P+ WIVPGGG+EPEEEP+ A+REV EEAGV G LGR +G+FE + +
Sbjct: 34 VLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQER 89
>sp|Q58CW0|NUD11_BOVIN Diphosphoinositol polyphosphate phosphohydrolase 3-beta OS=Bos
taurus GN=NUDT11 PE=2 SV=2
Length = 164
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 43/52 (82%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFE 89
+LLV+SSR P+ WIVPGGG+EPEEEP A+REV EEAGV GKLGR LG FE
Sbjct: 33 VLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVFEEAGVKGKLGRLLGNFE 84
>sp|Q9JI46|NUDT3_MOUSE Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Mus
musculus GN=Nudt3 PE=1 SV=1
Length = 168
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
+LLV+SSR P+ WIVPGGG+EPEEEP+ A+REV EEAGV G LGR +G+FE + +
Sbjct: 34 VLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQER 89
>sp|A2VE79|NUDT3_BOVIN Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Bos taurus
GN=NUDT3 PE=2 SV=1
Length = 172
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
+LLV+SSR P+ WIVPGGG+EPEEEP A+REV EEAGV G LGR +G+FE + +
Sbjct: 34 VLLVSSSRHPDRWIVPGGGMEPEEEPGTAAVREVCEEAGVKGTLGRLVGIFENQER 89
>sp|Q99321|DDP1_YEAST Diphosphoinositol polyphosphate phosphohydrolase DDP1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=DDP1 PE=1 SV=3
Length = 188
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 9 NHGLCHVDSVRR-------CPTMALFITTACVMST----LILLVTSSRRPEHWIVPGGGV 57
NHG ++ R P + C+ T +L++TSS + WIVP GGV
Sbjct: 7 NHGPVRSETAREGRENQVYSPVTGARLVAGCICLTPDKKQVLMITSSAHKKRWIVPKGGV 66
Query: 58 EPEE-EPAATALREVAEEAGVLGKLGRSLGVFE-VRP 92
E +E TA RE EEAG +GK+ +LG E +RP
Sbjct: 67 EKDEPNYETTAQRETWEEAGCIGKIVANLGTVEDMRP 103
>sp|Q09790|APS1_SCHPO Diphosphoinositol polyphosphate phosphohydrolase aps1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=aps1 PE=1 SV=1
Length = 210
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFE 89
+LLV+S+++ W+VP GG E +E ALRE EE G++G + RSLG F+
Sbjct: 57 VLLVSSAKKHPSWVVPKGGWEADESVQQAALREGWEEGGLVGHITRSLGSFK 108
>sp|Q8VY81|NUD21_ARATH Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21
PE=2 SV=1
Length = 198
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
+LL+++ ++ + ++P GG E +E ALRE EEAGV G+L SLG ++ + K
Sbjct: 81 VLLISAQKKGKGMLLPKGGWEIDESIEEAALRETIEEAGVTGQLEESLGKWQYKSK 136
>sp|Q9LE73|NUDT4_ARATH Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1
Length = 207
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 39 LLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
+L+ S+++ + + P GG E +E ALRE EEAGV G+L LG ++ + K
Sbjct: 85 VLLVSAQKGKGMLFPKGGWETDESMEEAALRETIEEAGVTGELEEKLGKWQYKSK 139
>sp|P96590|MUTT_BACSU Putative 8-oxo-dGTP diphosphatase OS=Bacillus subtilis (strain
168) GN=mutT PE=3 SV=1
Length = 149
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 35 STLILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
S ILLV P W +PGG V+P E A+RE+ EE G L +GV++ RPK
Sbjct: 14 SQQILLVKRKDVP-LWDLPGGRVDPGESAEEAAVREILEETGYNAALSAKIGVYQ-RPK 70
>sp|P50583|AP4A_HUMAN Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Homo sapiens
GN=NUDT2 PE=1 SV=3
Length = 147
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGV 77
LL+ +S HW P G VEP E+ TALRE EEAG+
Sbjct: 26 FLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGI 65
>sp|P50584|AP4A_PIG Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Sus scrofa
GN=NUDT2 PE=2 SV=3
Length = 147
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 23/40 (57%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGV 77
LL+ +S HW P G VEP E TALRE EEAG+
Sbjct: 26 FLLLQASNGIHHWTPPKGHVEPGESDLQTALRETQEEAGI 65
>sp|Q9C6Z2|NUD25_ARATH Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1
Length = 175
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 32 CVMSTLILLVTSSRR--PEHWIVPGGGVEPEEEPAATALREVAEEAGVL 78
C++++ L+ +SR P W +P GG+E E+P + A+RE+ EE GV+
Sbjct: 15 CLINSDNLVFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEETGVV 63
>sp|Q29RJ1|AP4A_BOVIN Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Bos taurus
GN=NUDT2 PE=2 SV=3
Length = 147
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 23/40 (57%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGV 77
LL+ +S HW P G VEP E TALRE EEAG+
Sbjct: 26 FLLLQASDGIHHWTPPKGHVEPGESDLETALRETQEEAGI 65
>sp|Q9LQU5|NUD18_ARATH Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana
GN=NUDT18 PE=2 SV=1
Length = 176
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 39 LLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
+LV SS++ + P GG E +E A RE EEAGV+G + R LG ++ K
Sbjct: 44 VLVISSQKGHALMFPKGGWELDESVEEAASRESLEEAGVVGNVERQLGKWDFLSK 98
>sp|Q9CAF2|NUD26_ARATH Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26
PE=1 SV=1
Length = 216
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 32 CVMSTLILLVTSSRR--PEHWIVPGGGVEPEEEPAATALREVAEEAGV 77
C+M++ + T+SR P W +P GG++ E+P +RE+ EE GV
Sbjct: 70 CLMNSSKKIFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGV 117
>sp|Q9U2M7|AP4A_CAEEL Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]
OS=Caenorhabditis elegans GN=ndx-4 PE=1 SV=1
Length = 138
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGV 77
LL+ +S P HW P G V+P E+ A+RE EEA +
Sbjct: 20 FLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANI 59
>sp|P53370|NUDT6_HUMAN Nucleoside diphosphate-linked moiety X motif 6 OS=Homo sapiens
GN=NUDT6 PE=1 SV=2
Length = 316
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 35 STLILLVTSSRRP--EHWIVPGGGVEPEEEPAATALREVAEEAGV 77
ST +LV R W PGG EPEE+ TA+REV EE G+
Sbjct: 154 STRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGI 198
>sp|Q9ZU95|NUD17_ARATH Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17
PE=2 SV=1
Length = 182
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 39 LLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRPK 93
+LV SS++ + P GG E +E A RE EEAGVLG + LG ++ K
Sbjct: 49 VLVISSQKGHALMFPKGGWELDESVEEAASRECLEEAGVLGNVEHQLGKWDFLSK 103
>sp|Q52K88|NUD13_ARATH Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana GN=NUDT13
PE=1 SV=1
Length = 202
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 29 TTACVMSTLILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRS-LGV 87
T+ + L +L+ SS + P GG E +E A RE EEAGV G L LGV
Sbjct: 39 TSVDFENKLQVLMISSPNRHDLVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGV 98
Query: 88 FEVRPK 93
+E R K
Sbjct: 99 WEFRSK 104
>sp|P54570|ADPP_BACSU ADP-ribose pyrophosphatase OS=Bacillus subtilis (strain 168)
GN=nudF PE=1 SV=1
Length = 185
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 38 ILLVTSSRRP-EHWIV--PGGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEVRP 92
I++V R+P E IV P G +E EEP TALRE+ EE G K + F P
Sbjct: 57 IIMVKQFRKPLERTIVEIPAGKLEKGEEPEYTALRELEEETGYTAKKLTKITAFYTSP 114
>sp|Q6PEC0|AP4A_RAT Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Rattus
norvegicus GN=Nudt2 PE=2 SV=3
Length = 147
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGV 77
LL+ +S HW P G V+P E TALRE EE G+
Sbjct: 26 FLLLQASDGIHHWTPPKGHVDPGENDLETALRETQEETGI 65
>sp|Q8CH40|NUDT6_MOUSE Nucleoside diphosphate-linked moiety X motif 6 OS=Mus musculus
GN=Nudt6 PE=2 SV=1
Length = 313
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 34 MSTLILLVTSSRRP--EHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSL 85
+ST +LV R W PGG EP E+ A TA+REV EE GV + RSL
Sbjct: 150 VSTRKVLVVQDRNKLKNMWKFPGGLSEPGEDIADTAVREVFEETGVKSEF-RSL 202
>sp|Q5LMH8|RPPH_RUEPO RNA pyrophosphohydrolase OS=Ruegeria pomeroyi (strain ATCC 700808
/ DSM 15171 / DSS-3) GN=rppH PE=3 SV=1
Length = 161
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 44 SRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKL 81
+ + W +P GGV+ +E+P ALRE+ EE GV L
Sbjct: 33 DQNTDAWQMPQGGVDEDEDPFEAALRELWEETGVTADL 70
>sp|P56380|AP4A_MOUSE Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Mus musculus
GN=Nudt2 PE=1 SV=3
Length = 147
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGV 77
LL+ +S HW P G V+P E TALRE EE G+
Sbjct: 26 FLLLQASDGIHHWTPPKGHVDPGENDLETALRETREETGI 65
>sp|Q16BL5|RPPH_ROSDO RNA pyrophosphohydrolase OS=Roseobacter denitrificans (strain
ATCC 33942 / OCh 114) GN=rppH PE=3 SV=1
Length = 160
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 50 WIVPGGGVEPEEEPAATALREVAEEAGV 77
W +P GGVE E+P A ALRE+ EE GV
Sbjct: 39 WQMPQGGVEKGEDPRAAALRELWEETGV 66
>sp|A9IMC9|RPPH_BART1 RNA pyrophosphohydrolase OS=Bartonella tribocorum (strain CIP
105476 / IBS 506) GN=rppH PE=3 SV=1
Length = 173
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 46 RPEHWIVPGGGVEPEEEPAATALREVAEEAGV 77
R W +P GG++ +E+P A RE+ EE G+
Sbjct: 43 RSHRWQLPQGGIDEDEKPLDAAYRELYEETGI 74
>sp|Q9ZG11|YO19_RHOER Uncharacterized Nudix hydrolase orf19 OS=Rhodococcus erythropolis
PE=3 SV=1
Length = 185
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 54 GGGVEPEEEPAATALREVAEEAGVLGKLGRSLGVFEV 90
GG V+P E P TA+REV EE G+ G + L + E+
Sbjct: 77 GGVVDPGETPQETAIREVGEELGIFGTADQPLQLTEI 113
>sp|A5FWY8|RPPH_ACICJ RNA pyrophosphohydrolase OS=Acidiphilium cryptum (strain JF-5)
GN=rppH PE=3 SV=1
Length = 164
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 49 HWIVPGGGVEPEEEPAATALREVAEEAGV 77
W +P GG++ +E+PAA LRE+ EE G
Sbjct: 39 QWQLPQGGIDGDEDPAAAVLRELDEEIGT 67
>sp|Q93ZY7|NUD12_ARATH Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12
PE=2 SV=1
Length = 203
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 38 ILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGR-SLGVFEVRPK 93
+L+V+S R + + P GG E +E A RE EEAGV G L LGV+E R K
Sbjct: 50 VLMVSSPNRHDL-VFPKGGWEDDETVLEAASREAIEEAGVKGILRELPLGVWEFRSK 105
>sp|A4FUG7|NUD17_BOVIN Nucleoside diphosphate-linked moiety X motif 17 OS=Bos taurus
GN=NUDT17 PE=2 SV=1
Length = 302
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 47 PEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGR----SLGVFE 89
P W+ PGG VEP+EE LRE+ EE+G+ G+ LG++E
Sbjct: 120 PNLWVPPGGHVEPDEELLDGGLRELWEESGLQLPQGQFSWVPLGLWE 166
>sp|A6Q441|RPPH_NITSB RNA pyrophosphohydrolase OS=Nitratiruptor sp. (strain SB155-2)
GN=rppH PE=3 SV=1
Length = 155
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 15 VDSVRRCPTMALFITTACVMSTLILLVTS-SRRPEHWIVPGGGVEPEEEPAATALREVAE 73
++ R P +A + ++ + + + S P+ W P GG++ E P LRE+ E
Sbjct: 1 MEKKRYRPNVAAIVLSSNYPKKVEFFIAARSDVPDSWQFPQGGIDKGESPKEALLRELKE 60
Query: 74 EAG 76
E G
Sbjct: 61 EIG 63
>sp|P70563|NUDT6_RAT Nucleoside diphosphate-linked moiety X motif 6 OS=Rattus norvegicus
GN=Nudt6 PE=1 SV=1
Length = 313
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 34 MSTLILLVTSSRRP--EHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSL 85
+ST +LV R W PGG EP E+ TA+REV EE GV + RSL
Sbjct: 150 VSTRKVLVVQDRNKLKNMWKFPGGLSEPGEDIGDTAVREVFEETGVKSEF-RSL 202
>sp|Q7NZ10|RPPH_CHRVO RNA pyrophosphohydrolase OS=Chromobacterium violaceum (strain
ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB
9131 / NCTC 9757) GN=rppH PE=3 SV=1
Length = 174
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 46 RPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSLG 86
R W P GG++P E P A RE+ EE G+L + + LG
Sbjct: 29 REHSWQFPQGGIKPGESPEAAMYRELLEEVGLLPQHVKILG 69
>sp|O06972|YVCI_BACSU Uncharacterized Nudix hydrolase YvcI OS=Bacillus subtilis (strain
168) GN=yvcI PE=3 SV=1
Length = 158
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 30 TACVMST--LILLVTSSRRPEHWIVPGGGVEPEEEPAATALREVAEEAGV 77
T CV+ T +LL+ RR W+ PGG +E E + +RE EE G+
Sbjct: 8 TNCVLQTDDKVLLLQKPRRG-WWVAPGGKMESGESVRDSVIREYREETGI 56
>sp|P95110|MUTT1_MYCTU Probable 8-oxo-dGTP diphosphatase 1 OS=Mycobacterium tuberculosis
GN=mutT1 PE=3 SV=2
Length = 317
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 46 RPEHWIVPGGGVEPEEEPAATALREVAEEAGVLGKLGRSL 85
R + W +P G V+P E A+RE+ EE G LGR L
Sbjct: 45 RYDDWSLPKGKVDPGETAPVGAVREILEETGHRANLGRRL 84
>sp|Q8FYM9|RPPH_BRUSU RNA pyrophosphohydrolase OS=Brucella suis biovar 1 (strain 1330)
GN=rppH PE=3 SV=2
Length = 178
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 50 WIVPGGGVEPEEEPAATALREVAEEAGV 77
W +P GG++ E+PA ALRE+ EE G+
Sbjct: 54 WQMPQGGIDKGEDPAQAALRELYEETGM 81
>sp|A9WWW1|RPPH_BRUSI RNA pyrophosphohydrolase OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=rppH PE=3 SV=1
Length = 178
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 50 WIVPGGGVEPEEEPAATALREVAEEAGV 77
W +P GG++ E+PA ALRE+ EE G+
Sbjct: 54 WQMPQGGIDKGEDPAQAALRELYEETGM 81
>sp|A5VSH6|RPPH_BRUO2 RNA pyrophosphohydrolase OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rppH PE=3 SV=1
Length = 178
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 50 WIVPGGGVEPEEEPAATALREVAEEAGV 77
W +P GG++ E+PA ALRE+ EE G+
Sbjct: 54 WQMPQGGIDKGEDPAQAALRELYEETGM 81
>sp|A9M874|RPPH_BRUC2 RNA pyrophosphohydrolase OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rppH PE=3 SV=1
Length = 178
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 50 WIVPGGGVEPEEEPAATALREVAEEAGV 77
W +P GG++ E+PA ALRE+ EE G+
Sbjct: 54 WQMPQGGIDKGEDPAQAALRELYEETGM 81
>sp|Q57B54|RPPH_BRUAB RNA pyrophosphohydrolase OS=Brucella abortus biovar 1 (strain
9-941) GN=rppH PE=3 SV=1
Length = 178
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 50 WIVPGGGVEPEEEPAATALREVAEEAGV 77
W +P GG++ E+PA ALRE+ EE G+
Sbjct: 54 WQMPQGGIDKGEDPAQAALRELYEETGM 81
>sp|Q2YLJ4|RPPH_BRUA2 RNA pyrophosphohydrolase OS=Brucella abortus (strain 2308)
GN=rppH PE=3 SV=2
Length = 178
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 50 WIVPGGGVEPEEEPAATALREVAEEAGV 77
W +P GG++ E+PA ALRE+ EE G+
Sbjct: 54 WQMPQGGIDKGEDPAQAALRELYEETGM 81
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,126,296
Number of Sequences: 539616
Number of extensions: 1308767
Number of successful extensions: 4190
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3916
Number of HSP's gapped (non-prelim): 286
length of query: 95
length of database: 191,569,459
effective HSP length: 65
effective length of query: 30
effective length of database: 156,494,419
effective search space: 4694832570
effective search space used: 4694832570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)