Query psy11373
Match_columns 539
No_of_seqs 351 out of 3211
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 16:45:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11373.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11373hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 3E-31 1E-35 301.7 30.4 232 65-404 135-386 (802)
2 3bcv_A Putative glycosyltransf 99.9 2.4E-26 8.1E-31 223.4 14.8 116 68-189 3-119 (240)
3 1qg8_A Protein (spore coat pol 99.9 1.7E-25 5.8E-30 219.5 11.1 118 70-193 1-128 (255)
4 1xhb_A Polypeptide N-acetylgal 99.9 2.4E-24 8.2E-29 231.2 16.0 116 67-187 26-148 (472)
5 2d7i_A Polypeptide N-acetylgal 99.9 3.8E-24 1.3E-28 234.9 11.4 118 67-189 109-231 (570)
6 2z86_A Chondroitin synthase; G 99.9 4E-23 1.4E-27 229.3 16.2 218 67-405 372-594 (625)
7 2ffu_A Ppgalnact-2, polypeptid 99.9 7.4E-23 2.5E-27 221.4 13.7 117 67-191 63-183 (501)
8 2z86_A Chondroitin synthase; G 99.9 3.8E-22 1.3E-26 221.4 18.1 240 68-392 91-336 (625)
9 4fix_A UDP-galactofuranosyl tr 99.9 2.7E-22 9.2E-27 222.5 15.1 253 67-409 177-446 (657)
10 3ckj_A Putative uncharacterize 99.9 7E-22 2.4E-26 202.3 10.8 119 68-190 46-169 (329)
11 3f1y_A Mannosyl-3-phosphoglyce 99.8 1.9E-20 6.5E-25 195.2 11.6 119 69-190 93-217 (387)
12 3l7i_A Teichoic acid biosynthe 99.8 6.9E-22 2.3E-26 223.2 0.0 115 70-189 2-116 (729)
13 2fy7_A Beta-1,4-galactosyltran 99.7 7.6E-18 2.6E-22 168.6 9.2 77 68-172 63-146 (287)
14 2nxv_A ATP synthase subunits r 99.7 5.4E-18 1.9E-22 166.4 7.9 92 67-189 13-114 (249)
15 2bo4_A Mannosylglycerate synth 99.6 2.3E-15 7.8E-20 156.8 15.1 112 74-190 4-128 (397)
16 2wvl_A Mannosyl-3-phosphoglyce 99.3 1.2E-11 4E-16 123.7 10.9 114 70-187 53-197 (391)
17 2zu9_A Mannosyl-3-phosphoglyce 99.2 8.9E-11 3.1E-15 120.5 11.8 105 71-180 52-184 (394)
18 1fo8_A Alpha-1,3-mannosyl-glyc 98.8 8.4E-09 2.9E-13 105.0 7.8 118 70-189 2-138 (343)
19 3lw6_A FI08434P, beta-4-galact 97.7 0.00037 1.3E-08 67.7 13.8 74 69-171 50-129 (287)
20 2c0n_A A197; thermophil protei 95.6 0.013 4.3E-07 53.8 5.2 40 151-193 49-91 (203)
21 1qwj_A Cytidine monophospho-N- 85.6 15 0.0005 34.0 13.9 90 81-180 27-120 (229)
22 3cu0_A Galactosylgalactosylxyl 84.1 6.6 0.00023 37.8 10.5 105 66-177 17-154 (281)
23 3tqd_A 3-deoxy-manno-octuloson 83.2 11 0.00039 35.8 12.1 92 83-187 35-132 (256)
24 1v84_A Galactosylgalactosylxyl 82.9 5.1 0.00018 38.1 9.2 103 69-178 2-129 (253)
25 3k8d_A 3-deoxy-manno-octuloson 82.3 9.9 0.00034 36.4 11.3 102 71-185 18-138 (264)
26 2d0j_A Galactosylgalactosylxyl 81.8 14 0.00047 35.0 11.6 103 69-178 2-123 (246)
27 3oam_A 3-deoxy-manno-octuloson 80.2 13 0.00045 35.0 11.4 87 81-180 26-116 (252)
28 2y6p_A 3-deoxy-manno-octuloson 79.6 9.1 0.00031 35.3 9.9 84 80-180 25-111 (234)
29 4fcu_A 3-deoxy-manno-octuloson 79.2 19 0.00065 34.1 12.1 95 80-187 24-125 (253)
30 3d5n_A Q97W15_sulso; NESG, SSR 78.9 7.7 0.00026 35.1 8.9 84 80-180 26-112 (197)
31 1omz_A Alpha-1,4-N-acetylhexos 78.5 12 0.00041 36.4 10.4 110 69-189 27-141 (293)
32 4hg6_A Cellulose synthase subu 77.7 1 3.6E-05 50.7 3.0 51 244-296 317-369 (802)
33 3ngw_A Molybdopterin-guanine d 77.0 12 0.00043 34.2 9.8 84 80-180 24-108 (208)
34 1h7e_A 3-deoxy-manno-octuloson 75.4 32 0.0011 31.7 12.5 87 80-180 25-114 (245)
35 2j0a_A Beta-1,3-N-acetylglucos 75.3 4.1 0.00014 39.6 6.1 37 153-189 91-127 (280)
36 2wee_A MOBA-related protein; u 73.9 14 0.00047 32.9 9.1 88 80-179 29-120 (197)
37 2waw_A MOBA relate protein; un 73.7 17 0.00057 32.3 9.6 88 80-179 29-120 (199)
38 1ezi_A CMP-N-acetylneuraminic 73.2 24 0.00084 32.2 10.9 90 81-180 28-122 (228)
39 1vgw_A 4-diphosphocytidyl-2C-m 73.0 29 0.00097 31.7 11.3 90 80-180 32-129 (231)
40 3q80_A 2-C-methyl-D-erythritol 73.0 8.5 0.00029 36.1 7.6 88 80-180 33-125 (231)
41 4fix_A UDP-galactofuranosyl tr 72.7 1.8 6.1E-05 47.5 3.1 47 243-295 364-417 (657)
42 3f1c_A Putative 2-C-methyl-D-e 70.4 15 0.00051 34.4 8.8 100 80-189 30-139 (246)
43 1xhb_A Polypeptide N-acetylgal 68.8 1.9 6.6E-05 44.9 2.2 49 244-296 204-259 (472)
44 3bcv_A Putative glycosyltransf 68.3 3.1 0.00011 38.4 3.3 32 244-275 171-203 (240)
45 1i52_A 4-diphosphocytidyl-2-C- 68.1 33 0.0011 31.5 10.6 90 80-180 33-124 (236)
46 1vic_A 3-deoxy-manno-octuloson 67.3 43 0.0015 31.4 11.4 89 80-180 25-116 (262)
47 3juk_A UDP-glucose pyrophospho 66.8 6.6 0.00023 37.6 5.5 95 76-180 28-149 (281)
48 2yc3_A 2-C-methyl-D-erythritol 66.3 16 0.00054 33.5 7.8 91 80-180 30-123 (228)
49 4fce_A Bifunctional protein GL 66.2 25 0.00086 36.0 10.2 89 80-180 34-124 (459)
50 2d7i_A Polypeptide N-acetylgal 64.1 3.2 0.00011 44.6 2.9 48 244-295 284-338 (570)
51 2ffu_A Ppgalnact-2, polypeptid 63.8 3.3 0.00011 43.5 2.8 52 244-295 236-290 (501)
52 3rsb_A Adenosylcobinamide-phos 62.8 6.5 0.00022 35.3 4.3 91 80-180 25-117 (196)
53 2qh5_A PMI, ALGA, mannose-6-ph 62.7 58 0.002 31.4 11.6 95 75-179 30-128 (308)
54 1hm9_A GLMU, UDP-N-acetylgluco 62.3 24 0.00084 36.2 9.2 91 76-180 34-127 (468)
55 2v0h_A Bifunctional protein GL 62.1 55 0.0019 33.3 11.9 88 81-180 32-121 (456)
56 4ecm_A Glucose-1-phosphate thy 61.8 9.2 0.00032 36.4 5.4 91 82-180 55-146 (269)
57 2e8b_A Probable molybdopterin- 57.5 32 0.0011 30.9 8.1 75 85-177 43-120 (201)
58 3st8_A Bifunctional protein GL 56.2 34 0.0012 35.7 9.1 99 75-180 34-136 (501)
59 2vsh_A TARI, 2-C-methyl-D-eryt 54.3 30 0.001 31.6 7.5 92 80-180 29-131 (236)
60 2xwl_A 2-C-methyl-D-erythritol 51.8 34 0.0012 30.9 7.3 89 80-180 28-118 (223)
61 3tzt_A Glycosyl transferase fa 51.6 60 0.0021 31.0 9.3 115 72-188 6-134 (276)
62 2dpw_A Hypothetical protein TT 51.3 52 0.0018 30.2 8.6 77 80-178 30-107 (232)
63 1w55_A ISPD/ISPF bifunctional 48.2 56 0.0019 32.8 8.8 85 80-180 29-114 (371)
64 2ux8_A Glucose-1-phosphate uri 47.9 28 0.00094 33.5 6.3 90 82-180 45-158 (297)
65 3pnn_A Conserved domain protei 46.9 41 0.0014 32.5 7.4 97 75-180 25-139 (303)
66 1g9r_A Glycosyl transferase; a 45.9 47 0.0016 32.2 7.7 107 80-188 10-129 (311)
67 1vpa_A 2-C-methyl-D-erythritol 42.7 63 0.0021 29.4 7.7 90 80-180 39-132 (234)
68 2gak_A Beta-1,6-N-acetylglucos 42.3 1.9E+02 0.0066 29.0 11.8 107 69-180 83-199 (391)
69 2xme_A CTP-inositol-1-phosphat 41.7 44 0.0015 30.5 6.4 86 82-179 45-131 (232)
70 2e3d_A UTP--glucose-1-phosphat 41.4 54 0.0019 31.4 7.3 91 81-180 38-159 (302)
71 2nxv_A ATP synthase subunits r 40.4 11 0.00038 35.4 1.9 44 244-295 153-203 (249)
72 1e5k_A Molybdopterin-guanine d 36.1 80 0.0028 28.2 7.1 92 80-187 31-123 (201)
73 2bn5_B U1 small nuclear ribonu 34.5 12 0.0004 21.4 0.6 11 522-532 7-17 (26)
74 1fxo_A Glucose-1-phosphate thy 30.7 1.7E+02 0.0057 27.9 8.8 97 75-180 27-125 (293)
75 2pa4_A UTP-glucose-1-phosphate 30.6 1.4E+02 0.0047 28.9 8.3 50 128-180 106-158 (323)
76 3kts_A Glycerol uptake operon 30.1 62 0.0021 29.3 5.0 77 75-161 12-88 (192)
77 1qg8_A Protein (spore coat pol 28.4 18 0.00061 33.4 1.2 20 243-262 155-175 (255)
78 2i5e_A Hypothetical protein MM 27.7 2.4E+02 0.0081 25.1 8.9 35 143-178 76-111 (211)
79 1lvw_A Glucose-1-phosphate thy 25.1 2.8E+02 0.0094 26.4 9.2 96 75-180 28-126 (295)
80 4evw_A Nucleoside-diphosphate- 24.6 1.2E+02 0.0043 28.2 6.5 91 76-173 25-123 (255)
81 3kcq_A Phosphoribosylglycinami 24.5 4E+02 0.014 24.2 10.3 96 71-176 8-103 (215)
82 2fy7_A Beta-1,4-galactosyltran 24.0 17 0.00059 35.2 0.2 72 332-403 173-257 (287)
83 3rht_A (gatase1)-like protein; 21.4 3E+02 0.01 25.9 8.4 79 100-188 5-84 (259)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=3e-31 Score=301.69 Aligned_cols=232 Identities=20% Similarity=0.249 Sum_probs=176.9
Q ss_pred CCCCCCcEEEEEecCCChhhH-HHHHHHHHcCCCCC--eEEEEEeCCCCCCcH---------------HHHHHHHHhCCC
Q psy11373 65 QEMPYPGVTILKPLTGTDPNL-YSNLETFFTMSYPK--YEICFCLEDDVDPAV---------------PLVEKLCKKYPN 126 (539)
Q Consensus 65 ~~~~~p~VSIIIP~~ne~~~l-~~~L~Sl~~q~yp~--~eIIvvdd~s~D~t~---------------~il~~l~~~~p~ 126 (539)
++++.|+|||+||+|||++.+ ++||+|+.+|+||+ +||++|||+|+|+|. +.++++.++++
T Consensus 135 ~~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~- 213 (802)
T 4hg6_A 135 QPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELG- 213 (802)
T ss_dssp CTTTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CccCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcC-
Confidence 456679999999999999876 99999999999996 999999999999983 33444444433
Q ss_pred ceEEEEecCcccCcchhhhhHHHHHHhcCCcEEEEEcCCCCCChHHHHHHHHhh--CCCeeEEEeeceecCCCChHHHHH
Q psy11373 127 VDTSVFIGGQVVGVNPKINNMEPGYKAAKYELILISDSGIRMKEDTLLDMVNHL--KPGVGLVHQMPFTWDRKGFAAALE 204 (539)
Q Consensus 127 ~~~~~~~~~~~~g~~~K~~al~~g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~--~~~vg~V~g~~~~~~~~~~~~~~~ 204 (539)
++++..+++. ++|++|+|.|++.+++||++++|+|+.++|++++++++.+ ++++++|++.....+.+.......
T Consensus 214 --v~~i~~~~~~--~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~ 289 (802)
T 4hg6_A 214 --VVYSTRERNE--HAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLA 289 (802)
T ss_dssp --CEEEECSSCC--SHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHT
T ss_pred --cEEEEecCCC--CcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhh
Confidence 2344544442 3499999999999999999999999999999999999999 889999999665555443221110
Q ss_pred HHHhcchhHHHHHhhhccccCcCCCCccCCCCCCCcccccccceeeEehHHHHHhCCCccccccchhhhhhhhhhhhhhh
Q psy11373 205 KTYFGTAQARIYLAANFLQIPCHTGCTLNDKAPNSIFMPFTGMSTLTRKSIFDELGGIKTFGCYLAEERMKEDTLLDMVN 284 (539)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~~~~~rr~~~~~vGgf~~~~~~~~ed~~~~di~~~~~~ 284 (539)
. +. .... +
T Consensus 290 ~--~~------------------------------------------------------~~~~---~------------- 297 (802)
T 4hg6_A 290 L--GD------------------------------------------------------RCPP---E------------- 297 (802)
T ss_dssp C--CT------------------------------------------------------TSCC---T-------------
T ss_pred H--Hh------------------------------------------------------hhhH---H-------------
Confidence 0 00 0000 0
Q ss_pred cccCCcceecccccccccchhhhhhhhhhcccchhHHHHHhhhccccccccchhhhchhhHhhhcchHHHHHhhhHhHHH
Q psy11373 285 HLKPGVGLVHQMPFTWDRKGFAAALEKTYFGTAQARIYLAANFLQIPCHTGMSTLTRKSIFDELGGIKTFGCYLAEDLFF 364 (539)
Q Consensus 285 ~~~p~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~~rr~~l~~~gg~~~~~~~~~ED~~l 364 (539)
.+.+ +.......+..+..+..|+++++||++++++||++. +.++||.++
T Consensus 298 -------------------------~~~~----~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~~--~~~~ED~~l 346 (802)
T 4hg6_A 298 -------------------------NEMF----YGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFAG--ETITEDAET 346 (802)
T ss_dssp -------------------------THHH----HHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCCC--SSSSHHHHH
T ss_pred -------------------------HHHH----HHHHHhhHhhcCCceecccchhhhHHHHHHcCCcCC--CCcchHHHH
Confidence 0000 000011112233456679999999999999999984 467899999
Q ss_pred HHHHHHcCCceeeecccccccCCCCCHHHHHHHHHHHHHH
Q psy11373 365 ARALSELGWKITISGQPAWQNSGYCDVTSFRNRLSRWVKL 404 (539)
Q Consensus 365 ~~~l~~~G~ri~~~~~~~~~~~~~~s~~~~~~qr~RW~r~ 404 (539)
+.++.++||++.+.+++.+.+..+.+++++++||.||.+.
T Consensus 347 ~~rl~~~G~ri~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G 386 (802)
T 4hg6_A 347 ALEIHSRGWKSLYIDRAMIAGLQPETFASFIQQRGRWATG 386 (802)
T ss_dssp HHHHHTTTCCEEECCCCCEEECCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEecCCEEEecCCCCHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999999984
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.94 E-value=2.4e-26 Score=223.38 Aligned_cols=116 Identities=19% Similarity=0.280 Sum_probs=104.3
Q ss_pred CCCcEEEEEecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhH
Q psy11373 68 PYPGVTILKPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNM 147 (539)
Q Consensus 68 ~~p~VSIIIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al 147 (539)
..|.||||||+||+++.|++||+|+++|+|+++|||+|||+|+|+|.++++++.+++|++ +++. .++.| ++.++
T Consensus 3 ~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i--~~i~-~~n~G---~~~a~ 76 (240)
T 3bcv_A 3 LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNI--KVIH-KKNAG---LGMAC 76 (240)
T ss_dssp CCCSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSE--EEEE-CCCCC---HHHHH
T ss_pred CCCcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCE--EEEE-CCCCC---hHHHH
Confidence 357899999999999999999999999999999999999999999999999999999876 4444 46777 89999
Q ss_pred HHHHHhcCCcEEEEEcCCCCCChHHHHHHHHhh-CCCeeEEEe
Q psy11373 148 EPGYKAAKYELILISDSGIRMKEDTLLDMVNHL-KPGVGLVHQ 189 (539)
Q Consensus 148 ~~g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~-~~~vg~V~g 189 (539)
|.|++.|+||||+++|+|+.++|++|+++++.+ +++.+++.+
T Consensus 77 N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~ 119 (240)
T 3bcv_A 77 NSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFT 119 (240)
T ss_dssp HHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999999999999999999999999 446666665
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.92 E-value=1.7e-25 Score=219.52 Aligned_cols=118 Identities=13% Similarity=0.227 Sum_probs=105.3
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecC--------cccCcc
Q psy11373 70 PGVTILKPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGG--------QVVGVN 141 (539)
Q Consensus 70 p~VSIIIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~--------~~~g~~ 141 (539)
|.||||||+||+++.|.+||+|+++|+|+++|||||||+|+|+|.++++++.+ .+++ +++..+ ++.|
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~~i--~~i~~~~~~~~~~~~n~G-- 75 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN-DNRV--RFYQSDISGVKERTEKTR-- 75 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG-STTE--EEEECCCCSHHHHHSSCH--
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh-cCCE--EEEecccccccccccccC--
Confidence 67999999999999999999999999999999999999999999999998865 5654 555555 4555
Q ss_pred hhhhhHHHHHHhcCCcEEEEEcCCCCCChHHHHHHHHhh--CCCeeEEEeecee
Q psy11373 142 PKINNMEPGYKAAKYELILISDSGIRMKEDTLLDMVNHL--KPGVGLVHQMPFT 193 (539)
Q Consensus 142 ~K~~al~~g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~--~~~vg~V~g~~~~ 193 (539)
++.++|.|++.|+||||+++|+|+.++|++|+++++.+ +|++++|++....
T Consensus 76 -~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~ 128 (255)
T 1qg8_A 76 -YAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKT 128 (255)
T ss_dssp -HHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEE
T ss_pred -HHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEE
Confidence 89999999999999999999999999999999999999 6789999885443
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.91 E-value=2.4e-24 Score=231.20 Aligned_cols=116 Identities=15% Similarity=0.115 Sum_probs=104.1
Q ss_pred CCCCcEEEEEecCCCh-hhHHHHHHHHHcCCCCC--eEEEEEeCCCCCC-cHHHHHHHHHhCC-CceEEEEecCcccCcc
Q psy11373 67 MPYPGVTILKPLTGTD-PNLYSNLETFFTMSYPK--YEICFCLEDDVDP-AVPLVEKLCKKYP-NVDTSVFIGGQVVGVN 141 (539)
Q Consensus 67 ~~~p~VSIIIP~~ne~-~~l~~~L~Sl~~q~yp~--~eIIvvdd~s~D~-t~~il~~l~~~~p-~~~~~~~~~~~~~g~~ 141 (539)
.+.|.||||||+|||+ +.|.+||+|+++|+||+ +|||||||+|+|+ |.++++++.+++| ++ +++..+++.|
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v--~vi~~~~n~G-- 101 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPV--HVIRMEQRSG-- 101 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCE--EEEECSSCCC--
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcE--EEEECCCCCC--
Confidence 4678999999999999 99999999999999987 7999999999995 9999999988888 54 5667777888
Q ss_pred hhhhhHHHHHHhcCCcEEEEEcCCCCCChHHHHHHHHhh--CCCeeEE
Q psy11373 142 PKINNMEPGYKAAKYELILISDSGIRMKEDTLLDMVNHL--KPGVGLV 187 (539)
Q Consensus 142 ~K~~al~~g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~--~~~vg~V 187 (539)
++.++|.|++.|++|||+++|+|+.++|++|+++++.+ ++.++++
T Consensus 102 -~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~ 148 (472)
T 1xhb_A 102 -LIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVC 148 (472)
T ss_dssp -HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEE
T ss_pred -hHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEE
Confidence 89999999999999999999999999999999999999 5555433
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.90 E-value=3.8e-24 Score=234.87 Aligned_cols=118 Identities=17% Similarity=0.224 Sum_probs=104.4
Q ss_pred CCCCcEEEEEecCCCh-hhHHHHHHHHHcCCCCC--eEEEEEeCCCCCCc-HHHHHHHHHhCCCceEEEEecCcccCcch
Q psy11373 67 MPYPGVTILKPLTGTD-PNLYSNLETFFTMSYPK--YEICFCLEDDVDPA-VPLVEKLCKKYPNVDTSVFIGGQVVGVNP 142 (539)
Q Consensus 67 ~~~p~VSIIIP~~ne~-~~l~~~L~Sl~~q~yp~--~eIIvvdd~s~D~t-~~il~~l~~~~p~~~~~~~~~~~~~g~~~ 142 (539)
...|.||||||+|||+ +.|.+||+|+++|+|++ +|||||||+|+|+| .++++++.+++|++ +++..+++.|
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v--~vi~~~~n~G--- 183 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSV--RILRTKKREG--- 183 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTE--EEEECSSCCC---
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeE--EEEECCCCCC---
Confidence 4578999999999998 99999999999999986 49999999999999 89999998888865 5567777878
Q ss_pred hhhhHHHHHHhcCCcEEEEEcCCCCCChHHHHHHHHhh-CCCeeEEEe
Q psy11373 143 KINNMEPGYKAAKYELILISDSGIRMKEDTLLDMVNHL-KPGVGLVHQ 189 (539)
Q Consensus 143 K~~al~~g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~-~~~vg~V~g 189 (539)
++.++|.|++.|++|||+++|+|+.++|+||+.+++.+ +....+|++
T Consensus 184 ~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~ 231 (570)
T 2d7i_A 184 LIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCP 231 (570)
T ss_dssp HHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEee
Confidence 89999999999999999999999999999999999999 333345555
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.89 E-value=4e-23 Score=229.33 Aligned_cols=218 Identities=15% Similarity=0.141 Sum_probs=163.9
Q ss_pred CCCCcEEEEEecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhh
Q psy11373 67 MPYPGVTILKPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINN 146 (539)
Q Consensus 67 ~~~p~VSIIIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~a 146 (539)
...|.||||||+||+++.|.+||+|+++|+|+++|||||||+|+|+|.++++++.+++|++ +++. .++.| ++.+
T Consensus 372 ~~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i--~~~~-~~n~G---~~~a 445 (625)
T 2z86_A 372 KRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRV--RFIS-QKNKG---IGSA 445 (625)
T ss_dssp CSSCSEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTE--EEEE-ECCCC---HHHH
T ss_pred ccCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcE--EEEe-CCCCC---HHHH
Confidence 3467899999999999999999999999999999999999999999999999998888875 3333 56666 8999
Q ss_pred HHHHHHhcCCcEEEEEcCCCCCChHHHHHHHHhh--CCCeeEEEeeceecCCCChHHHHHHHHhcchhHHHHHhhhcccc
Q psy11373 147 MEPGYKAAKYELILISDSGIRMKEDTLLDMVNHL--KPGVGLVHQMPFTWDRKGFAAALEKTYFGTAQARIYLAANFLQI 224 (539)
Q Consensus 147 l~~g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~--~~~vg~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (539)
+|.|++.|+||||+++|+|+.++|++|+++++.+ ++++++|.+.....+.++-.. .
T Consensus 446 ~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-------~--------------- 503 (625)
T 2z86_A 446 SNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLI-------S--------------- 503 (625)
T ss_dssp HHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEE-------E---------------
T ss_pred HHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEe-------c---------------
Confidence 9999999999999999999999999999999988 788999888444433322000 0
Q ss_pred CcCCCCccCCCCCCCcccccccceeeEehHHHHHhCCCccccccchhhhhhhhhhhhhhhcccCCcceecccccccccch
Q psy11373 225 PCHTGCTLNDKAPNSIFMPFTGMSTLTRKSIFDELGGIKTFGCYLAEERMKEDTLLDMVNHLKPGVGLVHQMPFTWDRKG 304 (539)
Q Consensus 225 ~~~~g~~~~~~~~~~~~~~~~G~~~~~rr~~~~~vGgf~~~~~~~~ed~~~~di~~~~~~~~~p~~~~~~~~~~~w~~~~ 304 (539)
.++.. |.
T Consensus 504 -----------------------------------~~~~~-----------------------~~--------------- 510 (625)
T 2z86_A 504 -----------------------------------NGYNW-----------------------PI--------------- 510 (625)
T ss_dssp -----------------------------------ECCCC-----------------------SS---------------
T ss_pred -----------------------------------cCccc-----------------------cc---------------
Confidence 00000 00
Q ss_pred hhhhhhhhhcccchhHHHHHhhhccccccccchhhhchhhHhhhcchHHHHHhhhHhHHHHHHHHHcCCceeeecccccc
Q psy11373 305 FAAALEKTYFGTAQARIYLAANFLQIPCHTGMSTLTRKSIFDELGGIKTFGCYLAEDLFFARALSELGWKITISGQPAWQ 384 (539)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~~rr~~l~~~gg~~~~~~~~~ED~~l~~~l~~~G~ri~~~~~~~~~ 384 (539)
... +.+......|+++++||++++++|||+.-.. .+||++++.|+.++| ++.+.|.+..+
T Consensus 511 -------------~~~-----~~~~~~~~~~~~~~~~r~~~~~~ggfd~~~~-~~eD~dl~~r~~~~g-~~~~~~~~~~~ 570 (625)
T 2z86_A 511 -------------YSR-----EKLTSAMICHHFRMFTARAWNLTEGFNESIS-NAVDYDMYLKLSEVG-PFKHINKICYN 570 (625)
T ss_dssp -------------CCH-----HHHTTSCCCCSCEEEEHHHHTTTTCCCSSCS-SCHHHHHHHHHTTTS-CEEEEEEEEEE
T ss_pred -------------CCH-----HHHhhcccCCceEEEEHHHHHHhCCCCCccC-ChHHHHHHHHHHHhC-CEEEeCCcEEE
Confidence 000 0011234558889999999999999985322 679999999999999 89998886654
Q ss_pred ---cCCCCCHHHHHHHHHHHHHHH
Q psy11373 385 ---NSGYCDVTSFRNRLSRWVKLR 405 (539)
Q Consensus 385 ---~~~~~s~~~~~~qr~RW~r~~ 405 (539)
+....+.+....|+.+|.+..
T Consensus 571 ~r~h~~~~s~~~~~~~~~~~~~~~ 594 (625)
T 2z86_A 571 RVLHGENTSIKKLDIQKENHFKVV 594 (625)
T ss_dssp EECC----CCSSHHHHHHHHHHHH
T ss_pred EEECCCccchhhHHHHHHHHHHHH
Confidence 334455555666666666643
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.88 E-value=7.4e-23 Score=221.36 Aligned_cols=117 Identities=18% Similarity=0.219 Sum_probs=100.2
Q ss_pred CCCCcEEEEEecCCChh-hHHHHHHHHHcCCCCC--eEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchh
Q psy11373 67 MPYPGVTILKPLTGTDP-NLYSNLETFFTMSYPK--YEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPK 143 (539)
Q Consensus 67 ~~~p~VSIIIP~~ne~~-~l~~~L~Sl~~q~yp~--~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K 143 (539)
.+.|.||||||+|||++ .|.+||+|+++|++++ +|||||||+|+|+|.+. ..+++|++ +++..+++.| +
T Consensus 63 ~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~---~~~~~~~v--~vi~~~~n~G---~ 134 (501)
T 2ffu_A 63 VDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGA---LLGKIEKV--RVLRNDRREG---L 134 (501)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHH---GGGGBTTE--EEEECSSCCH---H
T ss_pred cCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHH---HHhcCCCE--EEEECCCCcC---H
Confidence 46789999999999997 8999999999999986 69999999999999643 33567765 5567777777 8
Q ss_pred hhhHHHHHHhcCCcEEEEEcCCCCCChHHHHHHHHhh-CCCeeEEEeec
Q psy11373 144 INNMEPGYKAAKYELILISDSGIRMKEDTLLDMVNHL-KPGVGLVHQMP 191 (539)
Q Consensus 144 ~~al~~g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~-~~~vg~V~g~~ 191 (539)
+.|+|.|++.|+||||+++|+|+.++|++|+.+++.+ +...++|++..
T Consensus 135 ~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~ 183 (501)
T 2ffu_A 135 MRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPII 183 (501)
T ss_dssp HHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeee
Confidence 9999999999999999999999999999999999999 44446776633
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.88 E-value=3.8e-22 Score=221.40 Aligned_cols=240 Identities=15% Similarity=0.101 Sum_probs=155.4
Q ss_pred CCCcEEEEEecCCChhhHHHHHHHHHcCCCC-CeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCc-ccCcchhhh
Q psy11373 68 PYPGVTILKPLTGTDPNLYSNLETFFTMSYP-KYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQ-VVGVNPKIN 145 (539)
Q Consensus 68 ~~p~VSIIIP~~ne~~~l~~~L~Sl~~q~yp-~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~-~~g~~~K~~ 145 (539)
..|.||||||+|||++.|.+||+|+.+|+++ ++|||||||+|+|+|.++++++.+. +++ +++.... +.| |+.
T Consensus 91 ~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~-~~i--~~i~~~~~~~g---~~~ 164 (625)
T 2z86_A 91 IIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESL-LNI--KYVRQKDYGYQ---LCA 164 (625)
T ss_dssp CCCCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTT-SCE--EEEEECCCSCC---HHH
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhc-CCe--EEEEeCCCCcc---hhH
Confidence 4588999999999999999999999999886 7999999999999999999887432 333 4444332 223 899
Q ss_pred hHHHHHHhcCCcEEEEEcCCCCCChHHHHHHHHhh--CCCeeEEEeeceecCCCC-hHHHHHHHHhcchhHHHHHhhhcc
Q psy11373 146 NMEPGYKAAKYELILISDSGIRMKEDTLLDMVNHL--KPGVGLVHQMPFTWDRKG-FAAALEKTYFGTAQARIYLAANFL 222 (539)
Q Consensus 146 al~~g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~--~~~vg~V~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 222 (539)
|+|.|++.+++||++++|+|+.++|++|+.+++.+ ++.++++++.....+... +........+.. .
T Consensus 165 a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------~- 233 (625)
T 2z86_A 165 VRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLIN----------E- 233 (625)
T ss_dssp HHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGG----------T-
T ss_pred HHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhh----------h-
Confidence 99999999999999999999999999999999999 677777766444333322 211111100000 0
Q ss_pred ccCcCCCCccCCCCCCCcccccccceeeEehHHHHHhCCCccccccchhhhhhhhhhhhhhhcccCCcceeccccccccc
Q psy11373 223 QIPCHTGCTLNDKAPNSIFMPFTGMSTLTRKSIFDELGGIKTFGCYLAEERMKEDTLLDMVNHLKPGVGLVHQMPFTWDR 302 (539)
Q Consensus 223 ~~~~~~g~~~~~~~~~~~~~~~~G~~~~~rr~~~~~vGgf~~~~~~~~ed~~~~di~~~~~~~~~p~~~~~~~~~~~w~~ 302 (539)
+| ....... -.|.+.. .....|..
T Consensus 234 -~~----------------------~~~~~~~---~~~~~~~------------------------------~~~~~~~~ 257 (625)
T 2z86_A 234 -IP----------------------EIITNNQ---VAGKVEQ------------------------------NKSVDWRI 257 (625)
T ss_dssp -SC----------------------C------------------------------------------------CCCTHH
T ss_pred -cc----------------------hhccCCc---hhhhhcc------------------------------CCccccch
Confidence 00 0000000 0000000 00000100
Q ss_pred chhhhhhhhhhcccchhHHHHHhhhccccccccchhhhchhhHhhhcchHHHHHh-hhHhHHHHHHHHHcCCceeeeccc
Q psy11373 303 KGFAAALEKTYFGTAQARIYLAANFLQIPCHTGMSTLTRKSIFDELGGIKTFGCY-LAEDLFFARALSELGWKITISGQP 381 (539)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~~rr~~l~~~gg~~~~~~~-~~ED~~l~~~l~~~G~ri~~~~~~ 381 (539)
..+... .. .........+..|+++++||++++++|||+..... .+||.+++.|+.++|+++.+.|.+
T Consensus 258 ~~~~~~--~~----------~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~ 325 (625)
T 2z86_A 258 EHFKNT--DN----------LRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGA 325 (625)
T ss_dssp HHHHHT--TT----------TTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGGG
T ss_pred hhhccc--cc----------ccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcccc
Confidence 000000 00 00000112357799999999999999999854322 269999999999999999999998
Q ss_pred ccccCCCCCHH
Q psy11373 382 AWQNSGYCDVT 392 (539)
Q Consensus 382 ~~~~~~~~s~~ 392 (539)
.+.+..+.+..
T Consensus 326 ~v~H~~~~~~~ 336 (625)
T 2z86_A 326 MAYHQEPPGKE 336 (625)
T ss_dssp CEEEECCC---
T ss_pred hhhccCCcccc
Confidence 77777655433
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.87 E-value=2.7e-22 Score=222.53 Aligned_cols=253 Identities=10% Similarity=0.057 Sum_probs=165.7
Q ss_pred CCCCcEEEEEecCCChhhHHHHHHHHHcCCC---CCeEEEEEeCCCCCC--cHHHHHHHHHhCCCceEEEEecCcccCcc
Q psy11373 67 MPYPGVTILKPLTGTDPNLYSNLETFFTMSY---PKYEICFCLEDDVDP--AVPLVEKLCKKYPNVDTSVFIGGQVVGVN 141 (539)
Q Consensus 67 ~~~p~VSIIIP~~ne~~~l~~~L~Sl~~q~y---p~~eIIvvdd~s~D~--t~~il~~l~~~~p~~~~~~~~~~~~~g~~ 141 (539)
...|+||||||+||+++.|.+||+|+.+|+| +.+|||||||+|+|+ +.++.+.+....++ ++++..+ |.|
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~--I~vI~~~-N~G-- 251 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSR--LSIHDQP-NLG-- 251 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGG--EEEEECC-CCH--
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCC--EEEEECC-CCC--
Confidence 4468999999999999999999999999998 557999999999984 33444433344454 4555555 777
Q ss_pred hhhhhHHHHHHhc----CCcEEEEEcCCCCCChHHHHHHHHhh--CCCeeEEEeeceecCCCChHHHHHHHHhcchhHHH
Q psy11373 142 PKINNMEPGYKAA----KYELILISDSGIRMKEDTLLDMVNHL--KPGVGLVHQMPFTWDRKGFAAALEKTYFGTAQARI 215 (539)
Q Consensus 142 ~K~~al~~g~~~a----~~d~i~~lDaD~~~~p~~L~~lv~~~--~~~vg~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (539)
.+.+.|.|++.| ++|||+++|+|+.++|++|+++++.+ ++++++|++.....+..+.....
T Consensus 252 -~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~------------ 318 (657)
T 4fix_A 252 -GSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIM------------ 318 (657)
T ss_dssp -HHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCS------------
T ss_pred -HHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeec------------
Confidence 678889999988 56899999999999999999999999 67888888744433222100000
Q ss_pred HHhhhccccCcCCCCccCCCCCCCcccccccceeeEehHHHHHhCCCccccccchhhhhhhhhhhhhhhcccCCcceecc
Q psy11373 216 YLAANFLQIPCHTGCTLNDKAPNSIFMPFTGMSTLTRKSIFDELGGIKTFGCYLAEERMKEDTLLDMVNHLKPGVGLVHQ 295 (539)
Q Consensus 216 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~~~~~rr~~~~~vGgf~~~~~~~~ed~~~~di~~~~~~~~~p~~~~~~~ 295 (539)
+.+....+. ...+. ..+.+ ..|+.
T Consensus 319 -----------------------g~~~~~~~~--~~~~~---~~~~~-------~~~f~--------------------- 342 (657)
T 4fix_A 319 -----------------------GEVVDRSIF--MWTAA---PHAEY-------DHDFA--------------------- 342 (657)
T ss_dssp -----------------------CEEEETTTT--EEEEC---TTCCS-------CEETT---------------------
T ss_pred -----------------------ccEeccccc--ccccc---ccccc-------ccccc---------------------
Confidence 000000000 00000 00000 00000
Q ss_pred cccccccchhhhhhhhhhcccchhHHHHHhhhccccccccchhhhchhhHhhhcchHHHHHhhhHhHHHHHHHHHcCCce
Q psy11373 296 MPFTWDRKGFAAALEKTYFGTAQARIYLAANFLQIPCHTGMSTLTRKSIFDELGGIKTFGCYLAEDLFFARALSELGWKI 375 (539)
Q Consensus 296 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~~rr~~l~~~gg~~~~~~~~~ED~~l~~~l~~~G~ri 375 (539)
...+... ..... .........+..|+++++||++++++||++.+ ...+||.+++.|+.++||++
T Consensus 343 ------~~~l~~~-------~~~~~--~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~-F~~~ED~Dl~lR~~~~G~ki 406 (657)
T 4fix_A 343 ------EYPLNDN-------NSRSK--LLHRRIDVDYNGWWTCMIPRQVAEELGQPLPL-FIKWDDADYGLRAAEHGYPT 406 (657)
T ss_dssp ------TSCSSCS-------SHHHH--GGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSC-SSSSHHHHHHHHHHHTTCCE
T ss_pred ------ccccccc-------ccccc--ccccceeccccchhHhHhhHHHHHHhCCChhH-hccCcHHHHHHHHHHcCCeE
Confidence 0000000 00000 00011223567799999999999999999843 23469999999999999999
Q ss_pred eeecccccccCCC------CCHHHHHHHHHHHHHHHHHHh
Q psy11373 376 TISGQPAWQNSGY------CDVTSFRNRLSRWVKLRIAMA 409 (539)
Q Consensus 376 ~~~~~~~~~~~~~------~s~~~~~~qr~RW~r~~~~~~ 409 (539)
.+.|++.+.+... ..++.|+..|.|+.-.+++..
T Consensus 407 ~~~p~a~V~H~~~~~~~~~s~~r~Yy~~RN~l~~~~k~~~ 446 (657)
T 4fix_A 407 VTLPGAAIWHMAWSDKDDAIDWQAYFHLRNRLVVAAMHWD 446 (657)
T ss_dssp EEEEEEEEEECCSSSSCCTTSTHHHHHHHHHHHHHHHHCC
T ss_pred EEECCEEEEEcCcCccccccHHHHHHHHHHHHHHHHHhCC
Confidence 9999987766532 227889999999877766644
No 10
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.86 E-value=7e-22 Score=202.26 Aligned_cols=119 Identities=13% Similarity=0.071 Sum_probs=100.8
Q ss_pred CCCcEEEEEecCCChhhHHHHHHHHHcCCCCC-eEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEe-cCcccCcchhhh
Q psy11373 68 PYPGVTILKPLTGTDPNLYSNLETFFTMSYPK-YEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFI-GGQVVGVNPKIN 145 (539)
Q Consensus 68 ~~p~VSIIIP~~ne~~~l~~~L~Sl~~q~yp~-~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~-~~~~~g~~~K~~ 145 (539)
..|.||||||+|||++.|.+||+|+.+|+|++ +|||||||+|+|+|.++++++..+... +++++. ..++.| |..
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~-~~~~~~~~~~n~G---~~~ 121 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVS-REQALPEVPIRPG---KGE 121 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEE-HHHHCTTSCCCCS---HHH
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhcc-ceeeeccCCCCCC---HHH
Confidence 35789999999999999999999999999995 999999999999999999876432110 011111 456666 999
Q ss_pred hHHHHHHhcCCcEEEEEcCCCC-CChHHHHHHHHhh--CCCeeEEEee
Q psy11373 146 NMEPGYKAAKYELILISDSGIR-MKEDTLLDMVNHL--KPGVGLVHQM 190 (539)
Q Consensus 146 al~~g~~~a~~d~i~~lDaD~~-~~p~~L~~lv~~~--~~~vg~V~g~ 190 (539)
|+|.|++.++||||+++|+|+. ++|++|+++++.+ ++++++|.|.
T Consensus 122 a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~ 169 (329)
T 3ckj_A 122 ALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSF 169 (329)
T ss_dssp HHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEE
T ss_pred HHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEE
Confidence 9999999999999999999999 8999999999996 7789999884
No 11
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.82 E-value=1.9e-20 Score=195.24 Aligned_cols=119 Identities=15% Similarity=0.148 Sum_probs=98.7
Q ss_pred CCcEEEEEecCCChhhHHHHHHHHHc--CCCC-CeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhh
Q psy11373 69 YPGVTILKPLTGTDPNLYSNLETFFT--MSYP-KYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKIN 145 (539)
Q Consensus 69 ~p~VSIIIP~~ne~~~l~~~L~Sl~~--q~yp-~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~ 145 (539)
.|.||||||+|||++.|.+||+|+.+ |+|+ ++|||||||+|+|+|.++++++.++.....++++..+.+.| |..
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G---~g~ 169 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHG---KGD 169 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCS---HHH
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCC---HHH
Confidence 47899999999999999999999987 4665 79999999999999999998864431111111112345666 999
Q ss_pred hHHHHHHhcCCcEEEEEcCCCC-CChHHHHHHHHhh--CCCeeEEEee
Q psy11373 146 NMEPGYKAAKYELILISDSGIR-MKEDTLLDMVNHL--KPGVGLVHQM 190 (539)
Q Consensus 146 al~~g~~~a~~d~i~~lDaD~~-~~p~~L~~lv~~~--~~~vg~V~g~ 190 (539)
|+|.|++.|+||||+++|+|+. ++|++|+++++.+ ++++++|.|.
T Consensus 170 A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~ 217 (387)
T 3f1y_A 170 AMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAA 217 (387)
T ss_dssp HHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEE
T ss_pred HHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEe
Confidence 9999999999999999999999 8999999999999 6789999984
No 12
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.82 E-value=6.9e-22 Score=223.20 Aligned_cols=115 Identities=9% Similarity=0.128 Sum_probs=0.0
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHH
Q psy11373 70 PGVTILKPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEP 149 (539)
Q Consensus 70 p~VSIIIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~ 149 (539)
|.||||||+||+++.|.+||+|+++|+|+++|||||||+|+|+|.++++++.++++. +++++..+++.| .+.|.|.
T Consensus 2 p~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~-~i~~i~~~~n~G---~~~arN~ 77 (729)
T 3l7i_A 2 NKLTIIVTYYNAEEYITGCLESIKQQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDK-NIRFIDLDENSG---HAHARNI 77 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCC-CEEEEECCCCCC---HHHHHHH
Confidence 679999999999999999999999999999999999999999999999999877552 345556666777 6889999
Q ss_pred HHHhcCCcEEEEEcCCCCCChHHHHHHHHhhCCCeeEEEe
Q psy11373 150 GYKAAKYELILISDSGIRMKEDTLLDMVNHLKPGVGLVHQ 189 (539)
Q Consensus 150 g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~~~~vg~V~g 189 (539)
|++.|+||||+++|+|+.++|++|+++++.++ +.+++.+
T Consensus 78 gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~d~v~~ 116 (729)
T 3l7i_A 78 ALEEVETPYFMFLDADDELASYAITFYLEKFN-NTDGLIA 116 (729)
T ss_dssp ----------------------------------------
T ss_pred HHHhccCCEEEEECCCCCCChhHHHHHHHHhc-CCCEEEE
Confidence 99999999999999999999999999999985 3344443
No 13
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.72 E-value=7.6e-18 Score=168.57 Aligned_cols=77 Identities=17% Similarity=0.188 Sum_probs=65.8
Q ss_pred CCCcEEEEEecCCChhhHHHHHHHHH---cCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhh
Q psy11373 68 PYPGVTILKPLTGTDPNLYSNLETFF---TMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKI 144 (539)
Q Consensus 68 ~~p~VSIIIP~~ne~~~l~~~L~Sl~---~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~ 144 (539)
..|.||||||+||+++.|.+||+|+. +|+++++|||||||+++++ .+ |+
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~~EIiVVdds~d~~-------------------------f~---~a 114 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYGIYVINQAGDTI-------------------------FN---RA 114 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSSC-------------------------CC---HH
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEeCCCCc-------------------------cc---hh
Confidence 35789999999999999999999998 6889999999999944321 12 56
Q ss_pred hhHHHHH----HhcCCcEEEEEcCCCCCChHH
Q psy11373 145 NNMEPGY----KAAKYELILISDSGIRMKEDT 172 (539)
Q Consensus 145 ~al~~g~----~~a~~d~i~~lDaD~~~~p~~ 172 (539)
.++|.|+ +.|++||++++|+|+.+.|++
T Consensus 115 ~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 115 KLLNVGFQEALKDYDYTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEECTTEEESBTT
T ss_pred hhhhhHHHHHHHhCCCCEEEEECCCcccCCCc
Confidence 6778888 889999999999999999985
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.72 E-value=5.4e-18 Score=166.43 Aligned_cols=92 Identities=10% Similarity=0.038 Sum_probs=76.7
Q ss_pred CCCCcEEEEEecCCChhhHHHHHHHHHc----CCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcch
Q psy11373 67 MPYPGVTILKPLTGTDPNLYSNLETFFT----MSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNP 142 (539)
Q Consensus 67 ~~~p~VSIIIP~~ne~~~l~~~L~Sl~~----q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~ 142 (539)
...+.+||| |+||+++.|++||+|+.+ |++ +|||||||+|+|. .|
T Consensus 13 ~~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~--~EiIVVDn~s~d~-------------------------~g--- 61 (249)
T 2nxv_A 13 ESTLMFSVC-SLVRDQAKYDRLLESFERFGFTPDK--AEFLAADNREGNQ-------------------------FH--- 61 (249)
T ss_dssp CCCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTT--EEEEEEECTTSCS-------------------------CC---
T ss_pred CCcceEEEE-EeeCCHHHHHHHHHHHHHhccCCCc--EEEEEEECCCCCc-------------------------cc---
Confidence 345689975 679999999999997753 433 9999999999872 12
Q ss_pred hhhhHHHHHHhcCCcEEEEEcCCCCCChHHHHHHHHhh-C-----CCeeEEEe
Q psy11373 143 KINNMEPGYKAAKYELILISDSGIRMKEDTLLDMVNHL-K-----PGVGLVHQ 189 (539)
Q Consensus 143 K~~al~~g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~-~-----~~vg~V~g 189 (539)
.+.+.|.|++.|+|||++|+|+|+.++|+||+++++.+ + +++|+++.
T Consensus 62 ~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~ 114 (249)
T 2nxv_A 62 GFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGV 114 (249)
T ss_dssp TTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEES
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEee
Confidence 35677999999999999999999999999999999988 4 88888764
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.63 E-value=2.3e-15 Score=156.76 Aligned_cols=112 Identities=19% Similarity=0.258 Sum_probs=87.2
Q ss_pred EEEecCCChhhHHHHHHHHH-cCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCC---CceEEEEecC--c--ccCcchhhh
Q psy11373 74 ILKPLTGTDPNLYSNLETFF-TMSYPKYEICFCLEDDVDPAVPLVEKLCKKYP---NVDTSVFIGG--Q--VVGVNPKIN 145 (539)
Q Consensus 74 IIIP~~ne~~~l~~~L~Sl~-~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p---~~~~~~~~~~--~--~~g~~~K~~ 145 (539)
||||+ ||+ +|.++++++. .+.++++|||||||+|+|+|.+++++++++++ ++++...... . +.| |..
T Consensus 4 VIiP~-~eE-~I~~vl~~l~~~~~~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~G---kG~ 78 (397)
T 2bo4_A 4 VVFPF-KHE-HPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPG---KGD 78 (397)
T ss_dssp EEEEC-CSS-CHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSS---HHH
T ss_pred EEEeC-Ccc-CHHHHHHHHHHhccCCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCC---HHH
Confidence 45555 543 6888888875 34567899999999999999999997765554 3333222212 2 556 999
Q ss_pred hHHHHH----HhcCCcEEEEEcCCCC-CChHHHHHHHHhhCCCeeEEEee
Q psy11373 146 NMEPGY----KAAKYELILISDSGIR-MKEDTLLDMVNHLKPGVGLVHQM 190 (539)
Q Consensus 146 al~~g~----~~a~~d~i~~lDaD~~-~~p~~L~~lv~~~~~~vg~V~g~ 190 (539)
|++.|+ +.++||+++++|||.. .+|+++.++++.+.++.++|.|.
T Consensus 79 Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g~D~V~g~ 128 (397)
T 2bo4_A 79 GMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRHY 128 (397)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHcCCCEEEEE
Confidence 999999 8999999999999996 89999999999985568888873
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.28 E-value=1.2e-11 Score=123.66 Aligned_cols=114 Identities=14% Similarity=0.058 Sum_probs=86.9
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCc---HHHHHHHHHhCCCceEEEEecCc--------cc
Q psy11373 70 PGVTILKPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPA---VPLVEKLCKKYPNVDTSVFIGGQ--------VV 138 (539)
Q Consensus 70 p~VSIIIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t---~~il~~l~~~~p~~~~~~~~~~~--------~~ 138 (539)
..+|||||||||+.. +|+++++|.+.++|||+|||+|+|.+ .++++++++..++ ++.++++.. +.
T Consensus 53 ~klSIVVPvYNEe~~---lLesVl~qi~~d~eIIlVdDGS~D~s~~e~dil~~~~~~~~~-ri~viHQkn~gls~Ar~~~ 128 (391)
T 2wvl_A 53 EQTAIVVPTRNERLK---LLEGVLSGIPHEALILVASNSSPDRFQMERDLLEEFAHLTER-PALIFHQKDPALAEALRAG 128 (391)
T ss_dssp TTEEEEEEESSCCHH---HHHHHHHTSCTTSEEEEEECCCHHHHHHHHHHHHHHHHHTTC-CEEEEETTCHHHHHHHHHT
T ss_pred hceEEEEeccCcHHH---HHHHHHhcCCCCceEEEEECCCCCChHhHHHHHHHHHhhccc-ceEEEeccChHHHHHHHhc
Confidence 469999999999975 69999999998999999999999999 5788898864222 344454311 11
Q ss_pred C-----------cchhhhhHHHHHHhc---CCcEEEEEcCCCCCChHHHHHH---HHhh---CCCeeEE
Q psy11373 139 G-----------VNPKINNMEPGYKAA---KYELILISDSGIRMKEDTLLDM---VNHL---KPGVGLV 187 (539)
Q Consensus 139 g-----------~~~K~~al~~g~~~a---~~d~i~~lDaD~~~~p~~L~~l---v~~~---~~~vg~V 187 (539)
| .++|..++..|+..| +++||.|+|||..++.+..+.+ .+.| .....+|
T Consensus 129 G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a~s~~~MV 197 (391)
T 2wvl_A 129 GYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMAKTPFAMV 197 (391)
T ss_dssp TCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHCCSSEEEE
T ss_pred CcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHHHHHHhcccCCCcceE
Confidence 1 256888888999988 7999999999999977665544 3333 3557777
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.17 E-value=8.9e-11 Score=120.53 Aligned_cols=105 Identities=12% Similarity=0.103 Sum_probs=78.2
Q ss_pred cEEEEEecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCc------HHHHHHHHHhCCCceEEEEecCcc-------
Q psy11373 71 GVTILKPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPA------VPLVEKLCKKYPNVDTSVFIGGQV------- 137 (539)
Q Consensus 71 ~VSIIIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t------~~il~~l~~~~p~~~~~~~~~~~~------- 137 (539)
++|||||+|||+..+ +...+++-...+|||+|||+|+|+| .++++++++..+.. ..++....+
T Consensus 52 ~iSVVIP~yNEE~~l---I~~vL~~i~~~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~~-~~Vl~~~~p~v~~~~~ 127 (394)
T 2zu9_A 52 KMAVIVPMKNEKLHL---VDGVLKAIPHKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHSK-IIMIHQKDPGLAKAFK 127 (394)
T ss_dssp TEEEEEEESSCCHHH---HHHHHHHSCTTSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHCCC-EEEEETTCHHHHHHHH
T ss_pred CEEEEEecCcccHHH---HHHHHHcCCCCcEEEEEECcCcccccchhhHHHHHHHHhhccccc-eEEEecCCcchhHHhh
Confidence 599999999999764 4443332222589999999998888 78888876654543 233433321
Q ss_pred ------------cCcchhhhhHHHHHHhc---CCcEEEEEcCCCCCChHHHHHHHHhh
Q psy11373 138 ------------VGVNPKINNMEPGYKAA---KYELILISDSGIRMKEDTLLDMVNHL 180 (539)
Q Consensus 138 ------------~g~~~K~~al~~g~~~a---~~d~i~~lDaD~~~~p~~L~~lv~~~ 180 (539)
...|||..|+..|+..| ++|+|+++|||. ..|..+.++++.+
T Consensus 128 ~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy 184 (394)
T 2zu9_A 128 EVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDY 184 (394)
T ss_dssp HHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHH
T ss_pred hccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHh
Confidence 23457999999999999 999999999999 6788887777665
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.77 E-value=8.4e-09 Score=104.99 Aligned_cols=118 Identities=8% Similarity=0.096 Sum_probs=85.7
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHcCCCC--CeEEEEEeCCCCCCcHHHHHHHHHh-----CCCceEEEEecCcccCcc-
Q psy11373 70 PGVTILKPLTGTDPNLYSNLETFFTMSYP--KYEICFCLEDDVDPAVPLVEKLCKK-----YPNVDTSVFIGGQVVGVN- 141 (539)
Q Consensus 70 p~VSIIIP~~ne~~~l~~~L~Sl~~q~yp--~~eIIvvdd~s~D~t~~il~~l~~~-----~p~~~~~~~~~~~~~g~~- 141 (539)
+.++|+|++||..+ +++||+|+++|+.+ +.+|||.||++.+++.++++++..+ ++++..+ ...+++.|..
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~-~~~~~N~g~~~ 79 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNI-AVQPDHRKFQG 79 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCC-CCCTTCGGGHH
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCcccc-ccchhhcCccc
Confidence 45789999999998 99999999998743 4899999999999998888876421 1111100 0123344430
Q ss_pred ------hhhhhHHHHHHhcCCcEEEEEcCCCCCChHHHHHHHHhh-----CCCeeEEEe
Q psy11373 142 ------PKINNMEPGYKAAKYELILISDSGIRMKEDTLLDMVNHL-----KPGVGLVHQ 189 (539)
Q Consensus 142 ------~K~~al~~g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~-----~~~vg~V~g 189 (539)
.=..+++..+..+++|+++++|.|+.+.|++++-+.+.+ ++.+..+++
T Consensus 80 y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa 138 (343)
T 1fo8_A 80 YYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSA 138 (343)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEES
T ss_pred chhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEec
Confidence 011466666766799999999999999999987666554 788888877
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=97.75 E-value=0.00037 Score=67.70 Aligned_cols=74 Identities=15% Similarity=0.195 Sum_probs=53.6
Q ss_pred CCcEEEEEecCCChhhHHHHHHHH---H-cCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhh
Q psy11373 69 YPGVTILKPLTGTDPNLYSNLETF---F-TMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKI 144 (539)
Q Consensus 69 ~p~VSIIIP~~ne~~~l~~~L~Sl---~-~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~ 144 (539)
.-+|+||||.+|.+++|...|..+ + +|.. ++.|+||+... + .... ++
T Consensus 50 ~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l-~y~I~VieQ~~-~------------------------~~FN---Ra 100 (287)
T 3lw6_A 50 VHKMALLVPFRDRFEELLQFVPHMTAFLKRQGV-AHHIFVLNQVD-R------------------------FRFN---RA 100 (287)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTC-EEEEEEEEECS-S------------------------SCCC---HH
T ss_pred cceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCC-ceEEEEEecCC-C------------------------Cccc---hh
Confidence 347999999999999987777544 2 3433 58888887632 1 1112 56
Q ss_pred hhHHHHHHhc--CCcEEEEEcCCCCCChH
Q psy11373 145 NNMEPGYKAA--KYELILISDSGIRMKED 171 (539)
Q Consensus 145 ~al~~g~~~a--~~d~i~~lDaD~~~~p~ 171 (539)
.-+|.|+.+| ..|++++-|.|..+..|
T Consensus 101 ~LlNvGf~ea~~~~d~~ifHDVDLlP~dd 129 (287)
T 3lw6_A 101 SLINVGFQFASDVYDYIAMHDVDLLPLND 129 (287)
T ss_dssp HHHHHHHHHSCTTCCEEEEECTTEEECCT
T ss_pred heecccHHHHhccCCEEEEecccccccCC
Confidence 7778899887 47999999999998644
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=95.60 E-value=0.013 Score=53.81 Aligned_cols=40 Identities=15% Similarity=0.255 Sum_probs=32.5
Q ss_pred HHhcCCcEEEEEcCC---CCCChHHHHHHHHhhCCCeeEEEeecee
Q psy11373 151 YKAAKYELILISDSG---IRMKEDTLLDMVNHLKPGVGLVHQMPFT 193 (539)
Q Consensus 151 ~~~a~~d~i~~lDaD---~~~~p~~L~~lv~~~~~~vg~V~g~~~~ 193 (539)
++..++|+++++||| ...+|+.+.++++. +..+|+|....
T Consensus 49 l~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g~DVV~GsYp~ 91 (203)
T 2c0n_A 49 LEMKDYDTLAFLDEDVVPIEIDFQKVEAKFNE---GYDVVCGYYYL 91 (203)
T ss_dssp HHCTTCCEEEEECTTEEEEECCHHHHHHHHHH---TCSEEEEECBC
T ss_pred HhcCCCCEEEEEeCCCCccccCHHHHHHHHhC---CCCEEEEEeec
Confidence 445688999999999 99999999999965 66788884433
No 21
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=85.62 E-value=15 Score=34.01 Aligned_cols=90 Identities=7% Similarity=0.047 Sum_probs=55.0
Q ss_pred ChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcc--cCcchhhhhHHHHHHhc-CCc
Q psy11373 81 TDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQV--VGVNPKINNMEPGYKAA-KYE 157 (539)
Q Consensus 81 e~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~--~g~~~K~~al~~g~~~a-~~d 157 (539)
+.+-|...++.+.+...- -+|+++.++ +.+++...++ .++ ++..+.. .+..+...++..+++.. ..|
T Consensus 27 Gkpli~~~i~~~~~~~~~-~~ivv~~~~------~~i~~~~~~~-g~~--~~~~~~~~~~~~~~~~~~v~~al~~~~~~d 96 (229)
T 1qwj_A 27 GVPLIGWVLRAALDAGVF-QSVWVSTDH------DEIENVAKQF-GAQ--VHRRSSETSKDSSTSLDAIVEFLNYHNEVD 96 (229)
T ss_dssp TEEHHHHHHHHHHHHTCC-SEEEEEESC------HHHHHHHHHT-TCE--EEECCGGGSSTTCCHHHHHHHHHTTCTTCS
T ss_pred CEEHHHHHHHHHHhCCCc-CEEEEECCh------HHHHHHHHHc-CCE--EEeChhhhcCCCCcHHHHHHHHHHhcCCCC
Confidence 445678888888764321 367776632 2233443443 333 3333321 11111235667777766 679
Q ss_pred EEEEEcCCCCC-ChHHHHHHHHhh
Q psy11373 158 LILISDSGIRM-KEDTLLDMVNHL 180 (539)
Q Consensus 158 ~i~~lDaD~~~-~p~~L~~lv~~~ 180 (539)
.++++++|+-+ +++.++++++.+
T Consensus 97 ~vlv~~~D~Pli~~~~i~~l~~~~ 120 (229)
T 1qwj_A 97 IVGNIQATSPCLHPTDLQKVAEMI 120 (229)
T ss_dssp EEEEECTTCTTCCHHHHHHHHHHH
T ss_pred EEEEecCCCCcCCHHHHHHHHHHH
Confidence 99999999964 899999999987
No 22
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=84.09 E-value=6.6 Score=37.84 Aligned_cols=105 Identities=6% Similarity=0.006 Sum_probs=62.3
Q ss_pred CCCCCcEEEEEecCCChhhH---HHHHHHHHcCCCCCeEEEEEeCCC--CCCcHHHHHHHHHhCCCceEEEEecCcccCc
Q psy11373 66 EMPYPGVTILKPLTGTDPNL---YSNLETFFTMSYPKYEICFCLEDD--VDPAVPLVEKLCKKYPNVDTSVFIGGQVVGV 140 (539)
Q Consensus 66 ~~~~p~VSIIIP~~ne~~~l---~~~L~Sl~~q~yp~~eIIvvdd~s--~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~ 140 (539)
....|.+-||-|+|...... .+.-+.|.. -|++-.|||+|+. ++.+.+++++- ++.++.+....+...
T Consensus 17 ~~~~p~IivVTPTy~R~~Q~a~LtRLa~TL~~--Vp~L~WIVVEd~~~~t~~va~lL~rs-----Gl~y~HL~~~~p~~~ 89 (281)
T 3cu0_A 17 RGSHMTIYVVTPTYARLVQKAELVRLSQTLSL--VPRLHWLLVEDAEGPTPLVSGLLAAS-----GLLFTHLVVLTPKAQ 89 (281)
T ss_dssp ----CEEEEEEEECCSTTHHHHHHHHHHHHTT--SSSEEEEEEESSSSCCHHHHHHHHHH-----CSEEEEEECCCC---
T ss_pred CCCCCeEEEEeCCCCCcchhHHHHHHHHHHhc--CCceEEEEEcCCCCCCHHHHHHHHHc-----CCceEEeccCCCccc
Confidence 34578899999999876544 333344432 3689999999864 34445555543 233343432221111
Q ss_pred c-----------hhhhhHHHHHHhcC-----------------CcEEEEEcCCCCCChHHHHHHH
Q psy11373 141 N-----------PKINNMEPGYKAAK-----------------YELILISDSGIRMKEDTLLDMV 177 (539)
Q Consensus 141 ~-----------~K~~al~~g~~~a~-----------------~d~i~~lDaD~~~~p~~L~~lv 177 (539)
. ....+.|.|++..+ .-+|.|.|+|...+-+..++|-
T Consensus 90 ~~~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdemR 154 (281)
T 3cu0_A 90 RLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMR 154 (281)
T ss_dssp --------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHHT
T ss_pred cccccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHhh
Confidence 0 11456677775544 3588999999999999988863
No 23
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=83.20 E-value=11 Score=35.77 Aligned_cols=92 Identities=12% Similarity=0.187 Sum_probs=55.1
Q ss_pred hhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhc---CCcEE
Q psy11373 83 PNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAA---KYELI 159 (539)
Q Consensus 83 ~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a---~~d~i 159 (539)
+.|...++.+.+.. --+|+|+.|+ +.++++..++. .++.....+...| ..+ +..+++.. +.|.+
T Consensus 35 Pli~~~l~~l~~~~--i~~VvVvt~~------~~i~~~~~~~g-~~v~~~~~~~~~G---t~~-i~~a~~~l~~~~~d~v 101 (256)
T 3tqd_A 35 PMIQHVYESAIKSG--AEEVVIATDD------KRIRQVAEDFG-AVVCMTSSDHQSG---TER-IAEAAVALGFEDDEII 101 (256)
T ss_dssp EHHHHHHHHHHHTT--CSEEEEEESC------HHHHHHHHHTT-CEEEECCTTCCSH---HHH-HHHHHHHTTCCTTCEE
T ss_pred hHHHHHHHHHHhCC--CCEEEEECCH------HHHHHHHHHcC-CeEEEeCCCCCCc---HHH-HHHHHHHhCcCCCCEE
Confidence 45678888887643 2467777541 33444444443 3332212233344 233 55666665 57999
Q ss_pred EEEcCCCC-CChHHHHHHHHhh--CCCeeEE
Q psy11373 160 LISDSGIR-MKEDTLLDMVNHL--KPGVGLV 187 (539)
Q Consensus 160 ~~lDaD~~-~~p~~L~~lv~~~--~~~vg~V 187 (539)
+++++|.- ++++.++++++.+ +++.+++
T Consensus 102 lv~~gD~Pli~~~~i~~li~~~~~~~~~~~a 132 (256)
T 3tqd_A 102 VCLQGDEPLIPPDAIRKLAEDLDEHDNVKVA 132 (256)
T ss_dssp EEECTTCCCCCHHHHHHHHHHHHHCC--CEE
T ss_pred EEEeCCcccCCHHHHHHHHHHHHhCCCCCEE
Confidence 99999995 5899999999988 3454443
No 24
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=82.94 E-value=5.1 Score=38.14 Aligned_cols=103 Identities=7% Similarity=0.064 Sum_probs=64.1
Q ss_pred CCcEEEEEecCCChhhH---HHHHHHHHcCCCCCeEEEEEeCCC--CCCcHHHHHHHHHhCCCceEEEEecCcc------
Q psy11373 69 YPGVTILKPLTGTDPNL---YSNLETFFTMSYPKYEICFCLEDD--VDPAVPLVEKLCKKYPNVDTSVFIGGQV------ 137 (539)
Q Consensus 69 ~p~VSIIIP~~ne~~~l---~~~L~Sl~~q~yp~~eIIvvdd~s--~D~t~~il~~l~~~~p~~~~~~~~~~~~------ 137 (539)
.|.+-||-|+|...... .+.-+.|.. -|++-.|||+|+. ++.+.+++++- ++.++.+....+
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~--Vp~L~WIVVEd~~~~t~~va~lL~~s-----gl~y~HL~~~~p~~~~~~ 74 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTLLH--VPNLHWLVVEDAPRRTPLTARLLRDT-----GLNYTHLHVETPRNYKLR 74 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHHTT--SSSEEEEEEESSSSCCHHHHHHHHHH-----CCEEEEEECCCCHHHHCC
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhhcc--CCceEEEEEeCCCCCCHHHHHHHHHc-----CCceEEeecCCCcccccc
Confidence 57899999999876443 344444432 3789999999864 45555666553 233444432211
Q ss_pred -----cCcchhhhhHHHHHHhc---------CCcEEEEEcCCCCCChHHHHHHHH
Q psy11373 138 -----VGVNPKINNMEPGYKAA---------KYELILISDSGIRMKEDTLLDMVN 178 (539)
Q Consensus 138 -----~g~~~K~~al~~g~~~a---------~~d~i~~lDaD~~~~p~~L~~lv~ 178 (539)
.....-..+.|.|++.. ..-++.|.|+|...+-+..++|-.
T Consensus 75 ~~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR~ 129 (253)
T 1v84_A 75 GDARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRS 129 (253)
T ss_dssp -------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHHT
T ss_pred ccccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHhc
Confidence 00001234666776543 246899999999999999998753
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=82.27 E-value=9.9 Score=36.41 Aligned_cols=102 Identities=11% Similarity=0.110 Sum_probs=61.1
Q ss_pred cEEEEEecCCCh--------------hhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCc
Q psy11373 71 GVTILKPLTGTD--------------PNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQ 136 (539)
Q Consensus 71 ~VSIIIP~~ne~--------------~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~ 136 (539)
++.+|||+.+.. +.|...++.+.+.. --+|+++.|+ +.++++..++. +++.......
T Consensus 18 ~~~aIIlA~G~stRlp~K~L~~i~GkPmi~~~l~~l~~~~--i~~IvV~t~~------~~i~~~~~~~g-~~v~~~~~~~ 88 (264)
T 3k8d_A 18 SFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESG--AERIIVATDH------EDVARAVEAAG-GEVCMTRADH 88 (264)
T ss_dssp CCEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHHTT--CSEEEEEESC------HHHHHHHHHTT-CEEEECCTTC
T ss_pred ceEEEEEcCCCCCCCCCcceeeECCeEHHHHHHHHHHhCC--CCEEEEECCH------HHHHHHHHHcC-CEEEEecCCC
Confidence 467777776544 34567788876543 2467777641 23344444443 3332112333
Q ss_pred ccCcchhhhhHHHHHHhc---CCcEEEEEcCCCC-CChHHHHHHHHhh-CCCee
Q psy11373 137 VVGVNPKINNMEPGYKAA---KYELILISDSGIR-MKEDTLLDMVNHL-KPGVG 185 (539)
Q Consensus 137 ~~g~~~K~~al~~g~~~a---~~d~i~~lDaD~~-~~p~~L~~lv~~~-~~~vg 185 (539)
..|. .+ +..+++.. +.|+++++++|.- ++++.++++++.+ +++.+
T Consensus 89 ~~Gt---~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~ 138 (264)
T 3k8d_A 89 QSGT---ER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVG 138 (264)
T ss_dssp CSHH---HH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCS
T ss_pred CCCH---HH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCC
Confidence 4443 22 44444433 6799999999995 5999999999988 54443
No 26
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=81.77 E-value=14 Score=35.00 Aligned_cols=103 Identities=7% Similarity=0.065 Sum_probs=61.4
Q ss_pred CCcEEEEEecCCChhhH---HHHHHHHHcCCCCCeEEEEEeCCCCCC--cHHHHHHHHHhCCCceEEEEecCcccCcc--
Q psy11373 69 YPGVTILKPLTGTDPNL---YSNLETFFTMSYPKYEICFCLEDDVDP--AVPLVEKLCKKYPNVDTSVFIGGQVVGVN-- 141 (539)
Q Consensus 69 ~p~VSIIIP~~ne~~~l---~~~L~Sl~~q~yp~~eIIvvdd~s~D~--t~~il~~l~~~~p~~~~~~~~~~~~~g~~-- 141 (539)
.|.+-||-|+|...... .+.-+.|.. -|++-.|||+|+..-. +.+++++ . ++.++.+....+....
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~--Vp~l~WIVVEd~~~~~~~v~~lL~~----s-gl~y~HL~~~~~~~~~~~ 74 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFRQ--VAQLHWILVEDAAARSELVSRFLAR----A-GLPSTHLHVPTPRRYKRP 74 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHTT--STTEEEEEEESSSSCCHHHHHHHHH----S-CSCEEEEECCCCCC----
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHhc--CCceEEEEEcCCCCCCHHHHHHHHH----c-CCceEEEecCCccccCCC
Confidence 57889999999986443 333344432 3668888888866432 2344433 2 2334444322111110
Q ss_pred ---hhhhhHHHHHHhc---------CCcEEEEEcCCCCCChHHHHHHHH
Q psy11373 142 ---PKINNMEPGYKAA---------KYELILISDSGIRMKEDTLLDMVN 178 (539)
Q Consensus 142 ---~K~~al~~g~~~a---------~~d~i~~lDaD~~~~p~~L~~lv~ 178 (539)
.-..+.|.|++.. ..-++.|.|+|...+-+..++|-+
T Consensus 75 ~~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~emR~ 123 (246)
T 2d0j_A 75 GLPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMRT 123 (246)
T ss_dssp CCCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHHTT
T ss_pred CCcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHHhh
Confidence 1135566666432 247899999999999999888744
No 27
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=80.23 E-value=13 Score=35.01 Aligned_cols=87 Identities=8% Similarity=0.074 Sum_probs=54.0
Q ss_pred ChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhc---CCc
Q psy11373 81 TDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAA---KYE 157 (539)
Q Consensus 81 e~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a---~~d 157 (539)
+.+-|...++.+.+... -+|+++.|+ +.+++...++ .+++.....+...|. .+ +..+++.. +.|
T Consensus 26 GkPli~~~l~~l~~~~~--~~ivVv~~~------~~i~~~~~~~-g~~v~~~~~~~~~Gt---~~-~~~~~~~l~~~~~d 92 (252)
T 3oam_A 26 GKPMIQWVYEQAMQAGA--DRVIIATDD------ERVEQAVQAF-GGVVCMTSPNHQSGT---ER-LAEVVAKMAIPADH 92 (252)
T ss_dssp TEEHHHHHHHHHHHTTC--SEEEEEESC------HHHHHHHHHT-TCEEEECCTTCCSHH---HH-HHHHHHHTTCCTTS
T ss_pred CEEHHHHHHHHHHhCCC--CeEEEECCH------HHHHHHHHHc-CCEEEEcCCCCCCcH---HH-HHHHHHhcCcCCCC
Confidence 44567888888876532 467777642 3344444444 333322223344443 33 34445544 579
Q ss_pred EEEEEcCCCC-CChHHHHHHHHhh
Q psy11373 158 LILISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 158 ~i~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
.++++++|.- ++++.++++++.+
T Consensus 93 ~vlv~~gD~Pli~~~~i~~l~~~~ 116 (252)
T 3oam_A 93 IVVNVQGDEPLIPPAIIRQVADNL 116 (252)
T ss_dssp EEEECCTTCTTCCHHHHHHHHHHH
T ss_pred EEEEEeCCeeecCHHHHHHHHHHH
Confidence 9999999994 6999999999988
No 28
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=79.64 E-value=9.1 Score=35.29 Aligned_cols=84 Identities=11% Similarity=0.106 Sum_probs=53.8
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEec-C-cccCcchhhhhHHHHHHhcCCc
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIG-G-QVVGVNPKINNMEPGYKAAKYE 157 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~-~-~~~g~~~K~~al~~g~~~a~~d 157 (539)
++.+-|..+++.+.+. . -+|+++.+. +.+++...++ +++ +.. + ...| ..+.+ .+++..+.|
T Consensus 25 ~g~pli~~~l~~~~~~-~--~~i~v~~~~------~~i~~~~~~~--~~~--~~~~~~~~~g---~~~~~-~~~~~~~~~ 87 (234)
T 2y6p_A 25 LGKPLIRWVVEGLVKT-G--ERVILATDS------ERVKEVVEDL--CEV--FLTPSDLPSG---SDRVL-YVVRDLDVD 87 (234)
T ss_dssp TTEEHHHHHHHHHHTT-T--SCEEEEESC------HHHHHHHTTT--SEE--EECCTTCCSH---HHHHH-HHHTTCCCS
T ss_pred CCEEHHHHHHHHHHHh-C--CEEEEECCh------HHHHHHHHhc--eEE--EECCcccccc---hHHHH-HHHHhCCCC
Confidence 3447788899998765 3 356666643 2333443333 333 332 2 2233 33333 466666789
Q ss_pred EEEEEcCCC-CCChHHHHHHHHhh
Q psy11373 158 LILISDSGI-RMKEDTLLDMVNHL 180 (539)
Q Consensus 158 ~i~~lDaD~-~~~p~~L~~lv~~~ 180 (539)
+++++++|. .+++..++++++.+
T Consensus 88 ~vlv~~~D~P~~~~~~i~~l~~~~ 111 (234)
T 2y6p_A 88 LIINYQGDEPFVYEEDIKLIFREL 111 (234)
T ss_dssp EEEECCTTCCCCCHHHHHHHHHHH
T ss_pred EEEEecCCcCcCCHHHHHHHHHHH
Confidence 999999999 77889999999877
No 29
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=79.24 E-value=19 Score=34.11 Aligned_cols=95 Identities=12% Similarity=0.233 Sum_probs=57.3
Q ss_pred CChhhHHHHH-HHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhc---C
Q psy11373 80 GTDPNLYSNL-ETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAA---K 155 (539)
Q Consensus 80 ne~~~l~~~L-~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a---~ 155 (539)
++.+-|..++ +++.+.. --+|+|+.|+ +.+++...++. +++.....+...|. ..+..+++.. .
T Consensus 24 ~GkPli~~~i~~~~~~~~--~~~vvVvt~~------~~i~~~~~~~g-~~v~~~~~~~~~Gt----~~i~~a~~~~~~~~ 90 (253)
T 4fcu_A 24 HDRPMILRVVDQAKKVEG--FDDLCVATDD------ERIAEICRAEG-VDVVLTSADHPSGT----DRLSEVARIKGWDA 90 (253)
T ss_dssp TTEEHHHHHHHHHHTCTT--CCEEEEEESC------HHHHHHHHTTT-CCEEECCTTCCCHH----HHHHHHHHHHTCCT
T ss_pred CCeEhHHHHHHHHHHhcC--CCEEEEECCH------HHHHHHHHHcC-CeEEEeCCCCCChH----HHHHHHHHhcCcCC
Confidence 3455678888 8886532 2467777652 33444444443 33321122333332 3455566654 4
Q ss_pred CcEEEEEcCCCC-CChHHHHHHHHhh--CCCeeEE
Q psy11373 156 YELILISDSGIR-MKEDTLLDMVNHL--KPGVGLV 187 (539)
Q Consensus 156 ~d~i~~lDaD~~-~~p~~L~~lv~~~--~~~vg~V 187 (539)
.|+++++++|.- ++++.++++++.+ +++..++
T Consensus 91 ~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a 125 (253)
T 4fcu_A 91 DDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMS 125 (253)
T ss_dssp TCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEE
T ss_pred CCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEE
Confidence 699999999995 5999999999988 4344443
No 30
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=78.95 E-value=7.7 Score=35.07 Aligned_cols=84 Identities=12% Similarity=0.193 Sum_probs=54.3
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCc-ccCcchhhhhHHHHHHhcCC-c
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQ-VVGVNPKINNMEPGYKAAKY-E 157 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~-~~g~~~K~~al~~g~~~a~~-d 157 (539)
++.+-++.+++.+.+. ++++|.+... +.+++... .++ ++..+. ..| -..++..|++..+. |
T Consensus 26 ~g~pll~~~l~~l~~~-----~ivvv~~~~~----~~~~~~~~--~~~---~v~~~~~~~G---~~~si~~al~~~~~~~ 88 (197)
T 3d5n_A 26 DNTPIIMRTIRIYGDL-----EKIIIVGKYV----NEMLPLLM--DQI---VIYNPFWNEG---ISTSLKLGLRFFKDYD 88 (197)
T ss_dssp SSSBHHHHHHHHTTTS-----BCCEEECTTH----HHHGGGCT--TSC---EEECTTGGGC---HHHHHHHHHHHTTTSS
T ss_pred CceEHHHHHHHHHHhC-----CEEEEECCCH----HHHHHHhc--CCE---EEECCCCCCC---HHHHHHHHHHhhccCC
Confidence 4556788888888654 6676665431 22332221 122 233322 234 45677788887754 8
Q ss_pred EEEEEcCCCC-CChHHHHHHHHhh
Q psy11373 158 LILISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 158 ~i~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
.++++++|.- ++++.++++++.+
T Consensus 89 ~vlv~~~D~P~i~~~~i~~l~~~~ 112 (197)
T 3d5n_A 89 AVLVALGDMPFVTKEDVNKIINTF 112 (197)
T ss_dssp EEEEEETTCCCSCHHHHHHHHHTC
T ss_pred cEEEEeCCccccCHHHHHHHHHHh
Confidence 9999999994 6999999999876
No 31
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=78.55 E-value=12 Score=36.44 Aligned_cols=110 Identities=11% Similarity=0.106 Sum_probs=68.9
Q ss_pred CCcEEEEEecCCChhhHHHHHHHHHcCCCCC-eEEEEEeCCCCCCcHH-HHHHHHHhCC-CceEEEEecCcccCcchhhh
Q psy11373 69 YPGVTILKPLTGTDPNLYSNLETFFTMSYPK-YEICFCLEDDVDPAVP-LVEKLCKKYP-NVDTSVFIGGQVVGVNPKIN 145 (539)
Q Consensus 69 ~p~VSIIIP~~ne~~~l~~~L~Sl~~q~yp~-~eIIvvdd~s~D~t~~-il~~l~~~~p-~~~~~~~~~~~~~g~~~K~~ 145 (539)
...+||+|-+|+..+.|.+.++.+.+. |. -||+||=++...+..+ ....+ .+ .+.++++....+ . .+
T Consensus 27 ~~~FTvvi~ty~R~~~L~~lv~~~~~~--~~v~~IvVvWn~~~~~pp~~~~~~~---~~~~vpv~v~~~~~n-s----Ln 96 (293)
T 1omz_A 27 LDSFTLIMQTYNRTDLLLRLLNHYQAV--PSLHKVIVVWNNVGEKGPEELWNSL---GPHPIPVIFKPQTAN-K----MR 96 (293)
T ss_dssp TTCEEEEEEESSCHHHHHHHHHHHTTS--TTEEEEEEEECCTTCCCTHHHHHHT---CCCSSCEEEEECSSC-C----GG
T ss_pred CCceEEEEEeecccHHHHHHHHHHhcC--CCCCeEEEEeCCCCCCCChhhcccc---CCCCccEEEEeCCCC-c----hh
Confidence 346999999999988888888877543 44 5777666655433333 22222 11 234554443322 1 22
Q ss_pred hHHHHHHhcCCcEEEEEcCCCCCChHHHHHHHHhh--CCCeeEEEe
Q psy11373 146 NMEPGYKAAKYELILISDSGIRMKEDTLLDMVNHL--KPGVGLVHQ 189 (539)
Q Consensus 146 al~~g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~--~~~vg~V~g 189 (539)
|.-.-....+.|-|+.+|+|+.++.+.|+..-... .|+ -+|+-
T Consensus 97 nRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~Pd-RlVGf 141 (293)
T 1omz_A 97 NRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPD-QIIGF 141 (293)
T ss_dssp GGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTT-SEEES
T ss_pred hccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCcc-ceecC
Confidence 22223345689999999999999999998877766 444 34444
No 32
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=77.70 E-value=1 Score=50.67 Aligned_cols=51 Identities=16% Similarity=0.159 Sum_probs=34.9
Q ss_pred cccceeeEehHHHHHhCCCccccccchhhhhhhhh--hhhhhhcccCCcceeccc
Q psy11373 244 FTGMSTLTRKSIFDELGGIKTFGCYLAEERMKEDT--LLDMVNHLKPGVGLVHQM 296 (539)
Q Consensus 244 ~~G~~~~~rr~~~~~vGgf~~~~~~~~ed~~~~di--~~~~~~~~~p~~~~~~~~ 296 (539)
++|++.++||++++++|||++.. +.||+++.-- ...|+..+.|++.+.|..
T Consensus 317 ~~G~~~~~Rr~al~~vGgf~~~~--~~ED~~l~~rl~~~G~ri~~~~~~~~~~~~ 369 (802)
T 4hg6_A 317 FCGSAAVLRRRALDEAGGFAGET--ITEDAETALEIHSRGWKSLYIDRAMIAGLQ 369 (802)
T ss_dssp CCSSSEEEEHHHHHHHTTCCCSS--SSHHHHHHHHHHTTTCCEEECCCCCEEECC
T ss_pred ecccchhhhHHHHHHcCCcCCCC--cchHHHHHHHHHHcCCeEEEecCCEEEecC
Confidence 67999999999999999998633 3466554311 123344477877777653
No 33
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=77.02 E-value=12 Score=34.23 Aligned_cols=84 Identities=15% Similarity=0.197 Sum_probs=57.3
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhcCCcEE
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAAKYELI 159 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a~~d~i 159 (539)
++.+-++..++.+.+. +|++|.++ .+..+.+...+ .+ .++. +...|. +-...+..|++.. .|++
T Consensus 24 ~G~pli~~~~~~l~~~-----~vvvv~~~-----~~~~~~~~~~~-~~--~~v~-d~~~~~-G~~~si~~gl~~~-~~~v 87 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSPF-----QTVFVCRD-----EKQAEKLSSRY-EA--EFIW-DLHKGV-GSIAGIHAALRHF-GSCV 87 (208)
T ss_dssp TTEEHHHHHHHHHTTS-----EEEEECSS-----HHHHHHHHTTS-CS--CEEC-CTTCCC-SHHHHHHHHHHHH-SSEE
T ss_pred CCeeHHHHHHHHhcCC-----CEEEEECC-----HHHHHHHHHhc-CC--eEEe-cCCCCC-ChHHHHHHHHHHc-CCCE
Confidence 6677889999998654 88888642 13344443323 23 2232 222332 2467788888888 8999
Q ss_pred EEEcCCCC-CChHHHHHHHHhh
Q psy11373 160 LISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 160 ~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
++++|.- ++++.++++++.+
T Consensus 88 -v~~~D~P~i~~~~i~~l~~~~ 108 (208)
T 3ngw_A 88 -VAAIDMPFVKPEVLEHLYKEG 108 (208)
T ss_dssp -EEETTCTTCCHHHHHHHHHHH
T ss_pred -EEECCccCCCHHHHHHHHHHh
Confidence 9999995 4999999999987
No 34
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=75.40 E-value=32 Score=31.70 Aligned_cols=87 Identities=9% Similarity=0.140 Sum_probs=54.7
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecC-c-ccCcchhhhhHHHHHHhcCCc
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGG-Q-VVGVNPKINNMEPGYKAAKYE 157 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~-~-~~g~~~K~~al~~g~~~a~~d 157 (539)
++.+-+..+++.+.+.... -+|+++.+. +.+++...++ ++ .++..+ . ..| -.+ +..+++..+.|
T Consensus 25 ~g~pli~~~i~~~~~~~~~-~~ivvv~~~------~~i~~~~~~~-~~--~~~~~~~~~~~g---~~~-~~~~~~~~~~~ 90 (245)
T 1h7e_A 25 VGKPMIQHVYERALQVAGV-AEVWVATDD------PRVEQAVQAF-GG--KAIMTRNDHESG---TDR-LVEVMHKVEAD 90 (245)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CEEEEEESC------HHHHHHHHHT-TC--EEEECCSCCSSH---HHH-HHHHHHHSCCS
T ss_pred CCchHHHHHHHHHHhCCCC-CeEEEECCc------HHHHHHHHHc-CC--eEEeCCCccCCc---HHH-HHHHHHhCCCC
Confidence 4556788899998765321 477777653 2333443444 23 334432 2 223 333 33556666789
Q ss_pred EEEEEcCCCC-CChHHHHHHHHhh
Q psy11373 158 LILISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 158 ~i~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
.++++++|.. ++++.++++++.+
T Consensus 91 ~~lv~~~D~P~~~~~~i~~l~~~~ 114 (245)
T 1h7e_A 91 IYINLQGDEPMIRPRDVETLLQGM 114 (245)
T ss_dssp EEEECCTTCTTCCHHHHHHHHHHH
T ss_pred EEEEEcCCcCcCCHHHHHHHHHHH
Confidence 9999999996 4899999999887
No 35
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=75.26 E-value=4.1 Score=39.60 Aligned_cols=37 Identities=8% Similarity=0.100 Sum_probs=30.1
Q ss_pred hcCCcEEEEEcCCCCCChHHHHHHHHhhCCCeeEEEe
Q psy11373 153 AAKYELILISDSGIRMKEDTLLDMVNHLKPGVGLVHQ 189 (539)
Q Consensus 153 ~a~~d~i~~lDaD~~~~p~~L~~lv~~~~~~vg~V~g 189 (539)
..+.|+++..|+|+.+..+-|.+++..+++.-.+..|
T Consensus 91 ~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG 127 (280)
T 2j0a_A 91 VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVG 127 (280)
T ss_dssp HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEE
T ss_pred CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEE
Confidence 3589999999999999999999999988655444444
No 36
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=73.93 E-value=14 Score=32.86 Aligned_cols=88 Identities=10% Similarity=0.058 Sum_probs=54.8
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecC-cccCcchhhhhHHHHHHhc--CC
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGG-QVVGVNPKINNMEPGYKAA--KY 156 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~-~~~g~~~K~~al~~g~~~a--~~ 156 (539)
++.+-++.+++.+.+... -+|+++.+.. .+.+++...++ .+ .++..+ ...| -..++..|++.. +.
T Consensus 29 ~g~pll~~~l~~l~~~~~--~~i~vv~~~~----~~~~~~~~~~~-~~--~~~~~~~~~~g---~~~~i~~al~~~~~~~ 96 (197)
T 2wee_A 29 RDTTVLGATLDVARQAGF--DQLILTLGGA----ASAVRAAMALD-GT--DVVVVEDVERG---CAASLRVALARVHPRA 96 (197)
T ss_dssp TTEEHHHHHHHHHHHTTC--SEEEEEECTT----HHHHHHHSCCT-TS--EEEECC----C---CHHHHHHHHTTSCTTE
T ss_pred CCccHHHHHHHHHHhcCC--CcEEEEeCCC----HHHHHHHhccC-CC--EEEECCCcccC---HHHHHHHHHHHhcccC
Confidence 445678889998876532 3677766432 12333332222 23 333322 2233 466777788776 56
Q ss_pred cEEEEEcCCCC-CChHHHHHHHHh
Q psy11373 157 ELILISDSGIR-MKEDTLLDMVNH 179 (539)
Q Consensus 157 d~i~~lDaD~~-~~p~~L~~lv~~ 179 (539)
|.++++++|.. ++++.++++++.
T Consensus 97 ~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 97 TGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp EEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CeEEEEeCCcCCCCHHHHHHHHhh
Confidence 89999999995 699999999886
No 37
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=73.73 E-value=17 Score=32.29 Aligned_cols=88 Identities=9% Similarity=0.066 Sum_probs=56.3
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEe-cCcccCcchhhhhHHHHHHhc--CC
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFI-GGQVVGVNPKINNMEPGYKAA--KY 156 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~-~~~~~g~~~K~~al~~g~~~a--~~ 156 (539)
++.+-++.+++.+.+... -+|+++.+... +.+++...++ .+ .++. .+...| -..++..|++.. +.
T Consensus 29 ~g~pli~~~l~~l~~~~~--~~i~vv~~~~~----~~~~~~~~~~-~~--~~~~~~~~~~g---~~~~i~~al~~~~~~~ 96 (199)
T 2waw_A 29 GDTTLLGATLAMARRCPF--DQLIVTLGGAA----DEVLEKVELD-GL--DIVLVDDAGLG---CSSSLKSALTWVDPTA 96 (199)
T ss_dssp TTEEHHHHHHHHHHTSSC--SEEEEEECTTH----HHHHHHSCCT-TS--EEEECCCCCTT---CCCHHHHHHHTSCTTC
T ss_pred CccCHHHHHHHHHHhCCC--CcEEEEeCCCH----HHHHHHhccC-CC--EEEECCCcccC---HHHHHHHHHHhhhccC
Confidence 345678889999876531 36777765322 2333333222 23 3333 222233 456777888876 67
Q ss_pred cEEEEEcCCCCC-ChHHHHHHHHh
Q psy11373 157 ELILISDSGIRM-KEDTLLDMVNH 179 (539)
Q Consensus 157 d~i~~lDaD~~~-~p~~L~~lv~~ 179 (539)
|.++++++|+.. +++.++++++.
T Consensus 97 ~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 97 EGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp SEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CeEEEEeCCcccCCHHHHHHHHhh
Confidence 999999999974 89999999886
No 38
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=73.24 E-value=24 Score=32.22 Aligned_cols=90 Identities=8% Similarity=0.065 Sum_probs=55.4
Q ss_pred ChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCc--ccCcchhhhhHHHHHHhc--CC
Q psy11373 81 TDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQ--VVGVNPKINNMEPGYKAA--KY 156 (539)
Q Consensus 81 e~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~--~~g~~~K~~al~~g~~~a--~~ 156 (539)
+.+-|+.+++.+.+...- -+|+++.++ +.++++.+++. +. ++..+. ..+..+...++..|++.. +.
T Consensus 28 gkpll~~~l~~~~~~~~~-~~ivvv~~~------~~i~~~~~~~~-~~--~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~ 97 (228)
T 1ezi_A 28 GISLLGHTINAAISSKCF-DRIIVSTDG------GLIAEEAKNFG-VE--VVLRPAELASDTASSISGVIHALETIGSNS 97 (228)
T ss_dssp TEEHHHHHHHHHHHHCCC-SEEEEEESC------HHHHHHHHHTT-CE--EEECCC------CHHHHHHHHHHHHHTCCS
T ss_pred CcCHHHHHHHHHHhCCCC-CEEEEECCC------HHHHHHHHHcC-CE--EEeCchHHcCCCCChHHHHHHHHHHhCCCC
Confidence 446678888888764321 377777752 12333333442 32 233322 112233566777787766 46
Q ss_pred cEEEEEcCCCC-CChHHHHHHHHhh
Q psy11373 157 ELILISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 157 d~i~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
|.++++++|.. ++++.++++++.+
T Consensus 98 d~vlv~~~D~P~~~~~~i~~l~~~~ 122 (228)
T 1ezi_A 98 GTVTLLQPTSPLRTGAHIREAFSLF 122 (228)
T ss_dssp EEEEECCTTCTTCCHHHHHHHHTTC
T ss_pred CEEEEEcCCCCcCCHHHHHHHHHHH
Confidence 89999999996 5899999999887
No 39
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=73.04 E-value=29 Score=31.70 Aligned_cols=90 Identities=12% Similarity=0.047 Sum_probs=55.9
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhc-----
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAA----- 154 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a----- 154 (539)
++.+-|+.+++.+.+.... -+|+++.+...+...+ +.+. ..+. +.++ . ...| ...++..|++..
T Consensus 32 ~gkpli~~~l~~l~~~~~~-~~ivvv~~~~~~~~~~-~~~~--~~~~--i~~~-~-~~~~---~~~si~~~l~~~~~~~~ 100 (231)
T 1vgw_A 32 GSKTVLEHVLGIFERHEAV-DLTVVVVSPEDTFADK-VQTA--FPQV--RVWK-N-GGQT---RAETVRNGVAKLLETGL 100 (231)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CEEEEECCTTCSTHHH-HHHH--CTTS--EEEC-C-CCSS---HHHHHHHHHHHHHHHSS
T ss_pred CCeEHHHHHHHHHHcCCCC-CeEEEEECccHHHHHH-HHhc--CCCc--eEEE-c-CCCc---HHHHHHHHHHHHhhhcc
Confidence 4567788899998764321 3677776544333222 3221 1122 3322 2 2233 466667777654
Q ss_pred --CCcEEEEEcCCCC-CChHHHHHHHHhh
Q psy11373 155 --KYELILISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 155 --~~d~i~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
..|.++++++|.. ++++.++++++.+
T Consensus 101 ~~~~~~vlv~~~D~p~~~~~~i~~l~~~~ 129 (231)
T 1vgw_A 101 AAETDNILVHDAARCCLPSEALARLIEQA 129 (231)
T ss_dssp SCTTSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcccCCHHHHHHHHHHH
Confidence 4799999999985 5899999999987
No 40
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=73.00 E-value=8.5 Score=36.07 Aligned_cols=88 Identities=9% Similarity=0.185 Sum_probs=56.0
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhcC----
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAAK---- 155 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a~---- 155 (539)
++.+-+..+++.+.+... --+|+++.+... .+.++++... . +.++..+. .....+..|++..+
T Consensus 33 ~Gkpll~~~l~~~~~~~~-~~~ivVv~~~~~---~~~~~~~~~~--~--v~~v~gg~-----~r~~sv~~gl~~~~~~~~ 99 (231)
T 3q80_A 33 DGQTLIERAVDGLLDSGV-VDTVVVAVPADR---TDEARQILGH--R--AMIVAGGS-----NRTDTVNLALTVLSGTAE 99 (231)
T ss_dssp TTEEHHHHHHHHHHHTSC-CCEEEEEECGGG---HHHHHHHHGG--G--CEEEECCS-----SHHHHHHHHHGGGC---C
T ss_pred CCeEHHHHHHHHHHhCCC-CCeEEEECChHH---HHHHHHHhcC--C--eEEEcCCC-----chHHHHHHHHHHhhhcCC
Confidence 455678889998875422 146777765432 2334444332 2 23333221 12456677887764
Q ss_pred CcEEEEEcCCCCC-ChHHHHHHHHhh
Q psy11373 156 YELILISDSGIRM-KEDTLLDMVNHL 180 (539)
Q Consensus 156 ~d~i~~lDaD~~~-~p~~L~~lv~~~ 180 (539)
.|+++++|+|.-. +++.++++++.+
T Consensus 100 ~d~Vlv~~~d~Pli~~~~i~~li~~~ 125 (231)
T 3q80_A 100 PEFVLVHDAARALTPPALVARVVEAL 125 (231)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred CCEEEEEcCCcCCCCHHHHHHHHHHH
Confidence 5899999999865 999999999988
No 41
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=72.72 E-value=1.8 Score=47.55 Aligned_cols=47 Identities=15% Similarity=0.100 Sum_probs=36.2
Q ss_pred ccccceeeEehHHHHHhCCCccccccchhhhhhhhhhhhhhhc-------ccCCcceecc
Q psy11373 243 PFTGMSTLTRKSIFDELGGIKTFGCYLAEERMKEDTLLDMVNH-------LKPGVGLVHQ 295 (539)
Q Consensus 243 ~~~G~~~~~rr~~~~~vGgf~~~~~~~~ed~~~~di~~~~~~~-------~~p~~~~~~~ 295 (539)
..+|+++++||++++++|||++ .+... ||+++++|.. +.|++.++|.
T Consensus 364 ~~~g~~~lirr~v~~~vGgfd~-~F~~~-----ED~Dl~lR~~~~G~ki~~~p~a~V~H~ 417 (657)
T 4fix_A 364 YNGWWTCMIPRQVAEELGQPLP-LFIKW-----DDADYGLRAAEHGYPTVTLPGAAIWHM 417 (657)
T ss_dssp BCCTTEEEEEHHHHHHHCSCCS-CSSSS-----HHHHHHHHHHHTTCCEEEEEEEEEEEC
T ss_pred ccchhHhHhhHHHHHHhCCChh-HhccC-----cHHHHHHHHHHcCCeEEEECCEEEEEc
Confidence 3678999999999999999984 33222 6667666554 7889999995
No 42
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=70.39 E-value=15 Score=34.41 Aligned_cols=100 Identities=15% Similarity=0.223 Sum_probs=58.6
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhC-CCceEEEEecCcccCcchhhhhHHHHHHhc----
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKY-PNVDTSVFIGGQVVGVNPKINNMEPGYKAA---- 154 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~-p~~~~~~~~~~~~~g~~~K~~al~~g~~~a---- 154 (539)
++.+-|..+|+++.+.... -+|+++.+... .+.+++..+++ ....+.++..+. + ...++..|++..
T Consensus 30 ~Gkpll~~~l~~~~~~~~~-~~ivvv~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~sv~~al~~l~~~~ 100 (246)
T 3f1c_A 30 NGKPIIVHTVEKFILNTRF-DKILISSPKEW---MNHAEDNIKKYISDDRIVVIEGGE--D---RNETIMNGIRFVEKTY 100 (246)
T ss_dssp TTEEHHHHHHHHHHTCTTC-SEEEEEECGGG---HHHHHHHHHHHCCCTTEEEEECCS--S---HHHHHHHHHHHHHHHT
T ss_pred CCeeHHHHHHHHHHcCCCC-CEEEEEeCHHH---HHHHHHHHHHhCCCCCEEEECCCC--c---hHHHHHHHHHHHhhhh
Confidence 4457889999998765322 36666665432 22233332222 122233333222 2 344556666554
Q ss_pred ---CCcEEEEEcCCCC-CChHHHHHHHHhh-CCCeeEEEe
Q psy11373 155 ---KYELILISDSGIR-MKEDTLLDMVNHL-KPGVGLVHQ 189 (539)
Q Consensus 155 ---~~d~i~~lDaD~~-~~p~~L~~lv~~~-~~~vg~V~g 189 (539)
..|+++++|+|.- ++++.++++++.+ +.+ +.+..
T Consensus 101 ~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~-a~i~~ 139 (246)
T 3f1c_A 101 GLTDDDIIVTHDAVRPFLTHRIIEENIDAALETG-AVDTV 139 (246)
T ss_dssp CCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTS-EEEEE
T ss_pred cCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcC-CEEEE
Confidence 2689999999985 5999999999988 433 33444
No 43
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=68.79 E-value=1.9 Score=44.93 Aligned_cols=49 Identities=12% Similarity=0.038 Sum_probs=35.2
Q ss_pred cccceeeEehHHHHHhCCCccccccchhhhhhhhhhhhhhhc-------ccCCcceeccc
Q psy11373 244 FTGMSTLTRKSIFDELGGIKTFGCYLAEERMKEDTLLDMVNH-------LKPGVGLVHQM 296 (539)
Q Consensus 244 ~~G~~~~~rr~~~~~vGgf~~~~~~~~ed~~~~di~~~~~~~-------~~p~~~~~~~~ 296 (539)
.+|+++++||++|+++|||++..+.+ ..||.++..+.. ..|...+.|..
T Consensus 204 ~~g~~~~irr~~~~~iGgfde~~~~~----g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~ 259 (472)
T 1xhb_A 204 MAGGLFSIDRDYFQEIGTYDAGMDIW----GGENLEISFRIWQCGGTLEIVTCSHVGHVF 259 (472)
T ss_dssp CCSSSEEEEHHHHHHTTSCCTTSCTT----CCCCSHHHHHHHHTTCEEEEEEEEEEEEEC
T ss_pred ccceeEEEEHHHHHHcCCCCCccccc----CchhHHHHHHHHhcCCeEEEccCcEEEEEc
Confidence 67888999999999999998744322 135555555544 77888888863
No 44
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=68.26 E-value=3.1 Score=38.42 Aligned_cols=32 Identities=9% Similarity=0.108 Sum_probs=24.3
Q ss_pred cccceeeEehHHHHHhC-CCccccccchhhhhh
Q psy11373 244 FTGMSTLTRKSIFDELG-GIKTFGCYLAEERMK 275 (539)
Q Consensus 244 ~~G~~~~~rr~~~~~vG-gf~~~~~~~~ed~~~ 275 (539)
.+|+++++||+.++++| ||++..+...||+++
T Consensus 171 ~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~ 203 (240)
T 3bcv_A 171 VSAKVVLYRRNLIEKKHLRFVSERILPSEDLIF 203 (240)
T ss_dssp HTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHH
T ss_pred cchhheeeeHHHHHHcCCccCCCCCccCCCHHH
Confidence 45788999999999999 998854444455533
No 45
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=68.09 E-value=33 Score=31.50 Aligned_cols=90 Identities=14% Similarity=0.224 Sum_probs=56.6
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhc-CCcE
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAA-KYEL 158 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a-~~d~ 158 (539)
++.+-++.+++.+.+... --+|+++.+...+...+ ++ .++...+.++..+ .| ...++..|++.. +.|.
T Consensus 33 ~g~pll~~~i~~l~~~~~-~~~ivvv~~~~~~~~~~-~~----~~~~~~v~~~~~~--~g---~~~~i~~al~~~~~~~~ 101 (236)
T 1i52_A 33 GNQTILEHSVHALLAHPR-VKRVVIAISPGDSRFAQ-LP----LANHPQITVVDGG--DE---RADSVLAGLKAAGDAQW 101 (236)
T ss_dssp TTEEHHHHHHHHHHTSTT-EEEEEEEECTTCCSGGG-SG----GGGCTTEEEEECC--SS---HHHHHHHHHHTSTTCSE
T ss_pred CCEEHHHHHHHHHHhCCC-CCeEEEEeCccHHHHHH-HH----hcCCCCEEEECCC--CC---HHHHHHHHHHhcCCCCE
Confidence 345667888888865421 14677776654444333 22 2211123333322 23 456677788877 4799
Q ss_pred EEEEcCCCC-CChHHHHHHHHhh
Q psy11373 159 ILISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 159 i~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
++++++|.. ++++.++++++.+
T Consensus 102 ~lv~~~D~P~~~~~~i~~l~~~~ 124 (236)
T 1i52_A 102 VLVHDAARPCLHQDDLARLLALS 124 (236)
T ss_dssp EEECCTTCTTCCHHHHHHHHGGG
T ss_pred EEEEcCccccCCHHHHHHHHHHH
Confidence 999999986 5999999999887
No 46
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=67.31 E-value=43 Score=31.35 Aligned_cols=89 Identities=10% Similarity=0.177 Sum_probs=52.3
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEec--CcccCcchhhhhHHHHHHhcCCc
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIG--GQVVGVNPKINNMEPGYKAAKYE 157 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~--~~~~g~~~K~~al~~g~~~a~~d 157 (539)
++.+-|..+++.+.+... -+|+++.+. + .+++...++ ++ .++.. ....|..+ ......++...+.|
T Consensus 25 ~gkpli~~~l~~l~~~~~--~~ivvv~~~--~----~i~~~~~~~-~~--~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~ 92 (262)
T 1vic_A 25 KGKPMIQHVFEKALQSGA--SRVIIATDN--E----NVADVAKSF-GA--EVCMTSVNHNSGTER-LAEVVEKLAIPDNE 92 (262)
T ss_dssp TTEEHHHHHHHHHHHTTC--SEEEEEESC--H----HHHHHHHHT-TC--EEEECCCSSCCHHHH-HHHHHHHTTCCTTC
T ss_pred CCeEHHHHHHHHHHhCCC--ceEEEECCc--H----HHHHHHHhc-CC--EEEECCccccCChHH-HHHHHHHhccCCCC
Confidence 345778889999877543 477777653 1 233433343 23 33333 22233211 11112222223579
Q ss_pred EEEEEcCCCC-CChHHHHHHHHhh
Q psy11373 158 LILISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 158 ~i~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
+++++++|.- ++++.++++++.+
T Consensus 93 ~vlv~~~D~P~i~~~~i~~l~~~~ 116 (262)
T 1vic_A 93 IIVNIQGDEPLIPPVIVRQVADNL 116 (262)
T ss_dssp EEEECCTTCTTCCHHHHHHHHHHH
T ss_pred EEEEEeCCcCccCHHHHHHHHHHH
Confidence 9999999995 5899999999877
No 47
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=66.82 E-value=6.6 Score=37.64 Aligned_cols=95 Identities=12% Similarity=0.021 Sum_probs=60.6
Q ss_pred EecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhC-----------------------CCceEEEE
Q psy11373 76 KPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKY-----------------------PNVDTSVF 132 (539)
Q Consensus 76 IP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~-----------------------p~~~~~~~ 132 (539)
+|+-|. +-|...|+++.+... -+|+++..... +.+++...+. ...++..+
T Consensus 28 l~i~gk-pli~~~l~~l~~~gi--~~i~vv~~~~~----~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 100 (281)
T 3juk_A 28 LPIVDK-PLIQYAVEEAMEAGC--EVMAIVTGRNK----RSLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEKCCFSYV 100 (281)
T ss_dssp CBSSSS-BHHHHHHHHHHHHTC--CEEEEEECTTH----HHHHHHTSCCC--------CCHHHHHHHHHHHHHHCEEEEE
T ss_pred ceECCE-EHHHHHHHHHHhCCC--CEEEEEecCCH----HHHHHHHhcchhhhhhhhcccchhhhhhhhccccCccEEEE
Confidence 455555 788889998876532 46777764321 2222221111 12344444
Q ss_pred ecCcccCcchhhhhHHHHHHhcCCcEEEEEcCCCCCChH----HHHHHHHhh
Q psy11373 133 IGGQVVGVNPKINNMEPGYKAAKYELILISDSGIRMKED----TLLDMVNHL 180 (539)
Q Consensus 133 ~~~~~~g~~~K~~al~~g~~~a~~d~i~~lDaD~~~~p~----~L~~lv~~~ 180 (539)
..+...| -++++..+....+.+.++++.+|...+++ .++++++.+
T Consensus 101 ~~~~~~G---t~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~ 149 (281)
T 3juk_A 101 RQKQMKG---LGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLY 149 (281)
T ss_dssp ECSSCCC---HHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHH
T ss_pred ecCCCCC---cHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHH
Confidence 4555555 46777777777666888999999988888 899999877
No 48
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=66.27 E-value=16 Score=33.49 Aligned_cols=91 Identities=19% Similarity=0.147 Sum_probs=55.2
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhcC--Cc
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAAK--YE 157 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a~--~d 157 (539)
++.+-+..+++.+.+... --+|+++.+... .++.+.+...+. .++.++.. ..| ...++..|++..+ .+
T Consensus 30 ~g~pli~~~l~~l~~~~~-~~~ivvv~~~~~---~~~~~~~~~~~~-~~v~~~~~--~~~---~~~sv~~al~~~~~~~~ 99 (228)
T 2yc3_A 30 LGQPIALYSFFTFSRMPE-VKEIVVVCDPFF---RDIFEEYEESID-VDLSFAIP--GKE---RQDSVYSGLQEIDVNSE 99 (228)
T ss_dssp TTEEHHHHHHHHHHHCTT-EEEEEEECCGGG---HHHHHTTTTTSS-SEEEEECC--CSS---HHHHHHHHHTTSCTTCS
T ss_pred CCEEHHHHHHHHHHcCCC-CCeEEEEEChHH---HHHHHHHHHhCC-CcEEEECC--CCC---HHHHHHHHHHhhccCCC
Confidence 345677888888865421 136777654322 233333333331 23433322 123 4566777777654 58
Q ss_pred EEEEEcCCC-CCChHHHHHHHHhh
Q psy11373 158 LILISDSGI-RMKEDTLLDMVNHL 180 (539)
Q Consensus 158 ~i~~lDaD~-~~~p~~L~~lv~~~ 180 (539)
+++++|+|. .++++.++++++.+
T Consensus 100 ~vl~~d~d~P~~~~~~i~~l~~~~ 123 (228)
T 2yc3_A 100 LVCIHDSARPLVNTEDVEKVLKDG 123 (228)
T ss_dssp EEEEEETTCTTCCHHHHHHHHHHH
T ss_pred EEEEecCCCccCCHHHHHHHHHHH
Confidence 999999997 56999999999877
No 49
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=66.15 E-value=25 Score=35.98 Aligned_cols=89 Identities=12% Similarity=0.124 Sum_probs=57.1
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhcC-CcE
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAAK-YEL 158 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a~-~d~ 158 (539)
+..+-|+..++++.+... -+|+++..... +.++++..+. .++++..+...| -..++..+++..+ .|.
T Consensus 34 ~g~pli~~~l~~l~~~~~--~~i~vv~~~~~----~~i~~~~~~~---~~~~v~~~~~~g---~~~~i~~~~~~~~~~~~ 101 (459)
T 4fce_A 34 AGKPMVQHVIDAAMKLGA--QHVHLVYGHGG----ELLKKTLADP---SLNWVLQAEQLG---TGHAMQQAAPHFADDED 101 (459)
T ss_dssp TTEEHHHHHHHHHHHHTC--SCEEEEESSCH----HHHHHHC--------CEEECSSCCC---HHHHHHHHGGGSCTTSE
T ss_pred CCeeHHHHHHHHHHhCCC--CcEEEEeCCCH----HHHHHHhccC---CcEEEeCCCCCC---cHHHHHHHHHhcCCCCc
Confidence 344678888988876532 36666665432 3333332222 233444554455 4677777877765 489
Q ss_pred EEEEcCCC-CCChHHHHHHHHhh
Q psy11373 159 ILISDSGI-RMKEDTLLDMVNHL 180 (539)
Q Consensus 159 i~~lDaD~-~~~p~~L~~lv~~~ 180 (539)
++++++|. .++++.++++++.+
T Consensus 102 ~lv~~~D~P~i~~~~i~~l~~~~ 124 (459)
T 4fce_A 102 ILMLYGDVPLISVDTLQRLLAAK 124 (459)
T ss_dssp EEEEETTCTTCCHHHHHHHHHHC
T ss_pred EEEEeCCcccCCHHHHHHHHHHH
Confidence 99999999 46999999999988
No 50
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=64.14 E-value=3.2 Score=44.57 Aligned_cols=48 Identities=19% Similarity=0.034 Sum_probs=35.0
Q ss_pred cccceeeEehHHHHHhCCCccccccchhhhhhhhhhhhhhhc-------ccCCcceecc
Q psy11373 244 FTGMSTLTRKSIFDELGGIKTFGCYLAEERMKEDTLLDMVNH-------LKPGVGLVHQ 295 (539)
Q Consensus 244 ~~G~~~~~rr~~~~~vGgf~~~~~~~~ed~~~~di~~~~~~~-------~~p~~~~~~~ 295 (539)
.+|+++++||++|+++|||++..... ..||.++.+|.. ..|...+.|.
T Consensus 284 ~~g~~~~irr~~~~~iGgfDe~~~~~----g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~ 338 (570)
T 2d7i_A 284 MAGGLFAVDRKWFWELGGYDPGLEIW----GGEQYEISFKVWMCGGRMEDIPCSRVGHI 338 (570)
T ss_dssp CCSSSEEEEHHHHHHTTSSCTTCCSS----SSHHHHHHHHHHHTTCEEEEEEEEEEEEC
T ss_pred ccceEEEEEHHHHHhcCCCCCccccc----CcchHHHHHHHHhCCCeEEEccCeEEEEE
Confidence 67999999999999999998744322 135555555443 7888888885
No 51
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=63.75 E-value=3.3 Score=43.54 Aligned_cols=52 Identities=17% Similarity=0.040 Sum_probs=35.5
Q ss_pred cccceeeEehHHHHHhCCCccccccc-hhhhhhh--hhhhhhhhcccCCcceecc
Q psy11373 244 FTGMSTLTRKSIFDELGGIKTFGCYL-AEERMKE--DTLLDMVNHLKPGVGLVHQ 295 (539)
Q Consensus 244 ~~G~~~~~rr~~~~~vGgf~~~~~~~-~ed~~~~--di~~~~~~~~~p~~~~~~~ 295 (539)
..|+++++||++|+++|||++..... .||.++. -....++....|...+.|.
T Consensus 236 ~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~ 290 (501)
T 2ffu_A 236 IAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHV 290 (501)
T ss_dssp CCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEEC
T ss_pred ccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEE
Confidence 56889999999999999998755443 4444332 1112333447888888886
No 52
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=62.83 E-value=6.5 Score=35.27 Aligned_cols=91 Identities=11% Similarity=0.123 Sum_probs=53.6
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCC-ceEEEEecCcccCcchhhhhHHHHHHhcCCcE
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPN-VDTSVFIGGQVVGVNPKINNMEPGYKAAKYEL 158 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~-~~~~~~~~~~~~g~~~K~~al~~g~~~a~~d~ 158 (539)
++.+-+..+++.+.+... -+|+++.+...+...+.++ ..++. .++.++ .....| -..++..|++.. .|.
T Consensus 25 ~g~pli~~~l~~l~~~~~--~~v~vv~~~~~~~i~~~~~---~~~~~~~~~~~~-~~~~~g---~~~si~~al~~~-~~~ 94 (196)
T 3rsb_A 25 CGRCLIDYVVSPLLKSKV--NNIFIATSPNTPKTKEYIN---SAYKDYKNIVVI-DTSGKG---YIEDLNECIGYF-SEP 94 (196)
T ss_dssp TTEEHHHHHHHHHHSSSC--CCEEEECCTTCHHHHHHHH---HHTTTTTEEEE------------CCCCCTTTTTC-SSC
T ss_pred CCEEHHHHHHHHHHHCCC--CEEEEEeCCChHHHHHHHH---hhccCCCCEEEE-ECCCCC---cHHHHHHHHHhC-CCC
Confidence 455788999999876542 3677776544332222222 22331 123333 222233 344555666666 899
Q ss_pred EEEEcCCCC-CChHHHHHHHHhh
Q psy11373 159 ILISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 159 i~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
++++++|.- ++++.++++++.+
T Consensus 95 vlv~~~D~P~i~~~~i~~l~~~~ 117 (196)
T 3rsb_A 95 FLVVSSDLINLKSKIINSIVDYF 117 (196)
T ss_dssp EEEEETTEESCCHHHHHHHHHHH
T ss_pred EEEEeCCcccCCHHHHHHHHHHH
Confidence 999999995 5999999999988
No 53
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=62.69 E-value=58 Score=31.45 Aligned_cols=95 Identities=7% Similarity=0.047 Sum_probs=59.2
Q ss_pred EEecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHh-CCCc-eEEEEecCcccCcchhhhhHHHHHH
Q psy11373 75 LKPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKK-YPNV-DTSVFIGGQVVGVNPKINNMEPGYK 152 (539)
Q Consensus 75 IIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~-~p~~-~~~~~~~~~~~g~~~K~~al~~g~~ 152 (539)
++|+.+..+-|..+++.+.+. . -+|+++.+.. ..+.+++...+ + .+ ++.++..+...| -+.++..+..
T Consensus 30 ll~i~gg~pli~~~l~~l~~~-~--~~i~vv~~~~---~~~~i~~~~~~~~-~~~~~~~i~~~~~~g---t~~al~~a~~ 99 (308)
T 2qh5_A 30 FLKLFDHKSLFELSFKRNASL-V--DETLIVCNEK---HYFLALEEIKNEI-KNKSVGFLLESLSKN---TANAIALSAL 99 (308)
T ss_dssp GCTTBTTBCHHHHHHHHHHTT-C--SEEEEEEEGG---GHHHHHHHTTTTC-SSCEEEEEEESSCCC---HHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHcc-C--CCEEEEEChh---HHHHHHHHHHHhh-CCCccEEEeCCCCCC---hHHHHHHHHH
Confidence 345555667889999998776 3 3566665432 12334343333 3 22 334445455555 4666666666
Q ss_pred hcC-CcEEEEEcCCCCC-ChHHHHHHHHh
Q psy11373 153 AAK-YELILISDSGIRM-KEDTLLDMVNH 179 (539)
Q Consensus 153 ~a~-~d~i~~lDaD~~~-~p~~L~~lv~~ 179 (539)
..+ .++++++.+|... +++.+.++++.
T Consensus 100 ~l~~~~~~lv~~~D~~~~~~~~~~~~~~~ 128 (308)
T 2qh5_A 100 MSDKEDLLIVTPSDHLIKDLQAYENAIKK 128 (308)
T ss_dssp TSCTTSEEEEEESSCBCCCHHHHHHHHHH
T ss_pred HhCCCCeEEEEcCCccccCHHHHHHHHHH
Confidence 654 5589999999988 78888888875
No 54
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=62.27 E-value=24 Score=36.24 Aligned_cols=91 Identities=8% Similarity=0.062 Sum_probs=57.8
Q ss_pred EecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhcC
Q psy11373 76 KPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAAK 155 (539)
Q Consensus 76 IP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a~ 155 (539)
+|.. ..+-|+..|+.+.+.. --+|+++.+.. .+.+++...+ .+ .++..+...| -..++..+++..+
T Consensus 34 ~~i~-gkpli~~~l~~l~~~g--~~~iivv~~~~----~~~i~~~~~~--~i--~~v~~~~~~G---~~~sl~~a~~~~~ 99 (468)
T 1hm9_A 34 HKVA-GISMLEHVFRSVGAIQ--PEKTVTVVGHK----AELVEEVLAG--QT--EFVTQSEQLG---TGHAVMMTEPILE 99 (468)
T ss_dssp SEET-TEEHHHHHHHHHHTTC--CSEEEEEECTT----HHHHHHSSSS--SS--EEEECSSCCC---HHHHHHTTHHHHT
T ss_pred eEEC-CccHHHHHHHHHHhcC--CCCEEEEECCC----HHHHHHHhCC--Cc--EEEeCCccCC---hHHHHHHHHHHhc
Confidence 3443 4478899999987653 24677766432 2223332221 23 4444444445 4566666666654
Q ss_pred --CcEEEEEcCCCC-CChHHHHHHHHhh
Q psy11373 156 --YELILISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 156 --~d~i~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
.|.++++++|.. +.++.++++++.+
T Consensus 100 ~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 127 (468)
T 1hm9_A 100 GLSGHTLVIAGDTPLITGESLKNLIDFH 127 (468)
T ss_dssp TCCSEEEEEETTCTTCCHHHHHHHHHHH
T ss_pred cCCCeEEEEeCCccccCHHHHHHHHHHH
Confidence 689999999996 5899999999877
No 55
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=62.09 E-value=55 Score=33.30 Aligned_cols=88 Identities=11% Similarity=0.121 Sum_probs=57.6
Q ss_pred ChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhcC-CcEE
Q psy11373 81 TDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAAK-YELI 159 (539)
Q Consensus 81 e~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a~-~d~i 159 (539)
..+-|+..|+++.+... -+|+++.+.. .+.+++...++ . ++++..+...| -..++..+++..+ .|.+
T Consensus 32 gkpli~~~l~~l~~~~~--~~iivv~~~~----~~~i~~~~~~~-~--~~~v~~~~~~g---~~~~~~~~~~~~~~~~~v 99 (456)
T 2v0h_A 32 GKPMVKHVIDTAHQLGS--ENIHLIYGHG----GDLMRTHLANE-Q--VNWVLQTEQLG---TAHAVQQAAPFFKDNENI 99 (456)
T ss_dssp TEEHHHHHHHHHHHTTC--SCEEEEECTT----HHHHHHHTTTC-C--CEEEECSCCCC---HHHHHHHHGGGCCTTSEE
T ss_pred CccHHHHHHHHHHhCCC--CcEEEEeCCC----HHHHHHHhhcC-C--cEEEeCCCCCC---cHHHHHHHHHhcCCCCeE
Confidence 34678888998876532 3566666542 13344433332 2 34444444444 4567777777664 7999
Q ss_pred EEEcCCCC-CChHHHHHHHHhh
Q psy11373 160 LISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 160 ~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
+++++|.. +++..++++++.+
T Consensus 100 lv~~~D~P~i~~~~i~~l~~~~ 121 (456)
T 2v0h_A 100 VVLYGDAPLITKETLEKLIEAK 121 (456)
T ss_dssp EEEETTCTTCCHHHHHHHHHHC
T ss_pred EEEcCCcceeCHHHHHHHHHHH
Confidence 99999995 6899999999887
No 56
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=61.78 E-value=9.2 Score=36.41 Aligned_cols=91 Identities=10% Similarity=0.040 Sum_probs=54.1
Q ss_pred hhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHH-hCCCceEEEEecCcccCcchhhhhHHHHHHhcCCcEEE
Q psy11373 82 DPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCK-KYPNVDTSVFIGGQVVGVNPKINNMEPGYKAAKYELIL 160 (539)
Q Consensus 82 ~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~-~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a~~d~i~ 160 (539)
.+-|..+|+++.+.. --+|+++.+... ..++.+.+.. ....+++.....+...| -..++..+....+.+.++
T Consensus 55 ~pli~~~l~~l~~~g--~~~iivv~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~G---~~~al~~a~~~~~~~~~l 127 (269)
T 4ecm_A 55 YPMIYHAVYKLKQCD--ITDIMIITGKEH--MGDVVSFLGSGQEFGVSFTYRVQDKAGG---IAQALGLCEDFVGNDRMV 127 (269)
T ss_dssp EEHHHHHHHHHHHTT--CCEEEEEECTTT--HHHHHHHHTTSGGGTCEEEEEECSSCCC---HHHHHHTTHHHHTTSEEE
T ss_pred EEHHHHHHHHHHHCC--CCEEEEECChhh--HHHHHHHHhhccccCceEEEeeCCccCc---HHHHHHHHHHhcCCCcEE
Confidence 345677888887653 246777765422 1233322221 01123444444444455 456676776666678999
Q ss_pred EEcCCCCCChHHHHHHHHhh
Q psy11373 161 ISDSGIRMKEDTLLDMVNHL 180 (539)
Q Consensus 161 ~lDaD~~~~p~~L~~lv~~~ 180 (539)
++.+|.... ..+.++++.+
T Consensus 128 v~~~D~~~~-~~l~~l~~~~ 146 (269)
T 4ecm_A 128 VILGDNIFS-DDIRPYVEEF 146 (269)
T ss_dssp EEETTEEES-SCSHHHHHHH
T ss_pred EEeCCccCc-cCHHHHHHHH
Confidence 999999776 5677777776
No 57
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=57.53 E-value=32 Score=30.90 Aligned_cols=75 Identities=19% Similarity=0.204 Sum_probs=47.8
Q ss_pred HHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecC-cccCcchhhhhHHHHHHhcCCcEEEEEc
Q psy11373 85 LYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGG-QVVGVNPKINNMEPGYKAAKYELILISD 163 (539)
Q Consensus 85 l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~-~~~g~~~K~~al~~g~~~a~~d~i~~lD 163 (539)
++.+++.+.+. --+|+++.+...+ +.+. ++ +++..+ ...| -..++..|++..+.|.+++++
T Consensus 43 l~~~l~~l~~~---~~~i~vv~~~~~~------~~~~----~~--~~v~~~~~~~g---~~~~i~~al~~~~~~~~lv~~ 104 (201)
T 2e8b_A 43 IERVYETAKSV---FKEVYIVAKDREK------FSFL----NA--PVVLDEFEESA---SIIGLYTALKHAKEENVFVLS 104 (201)
T ss_dssp HHHHHHHHHTT---CSEEEEEESCSGG------GGGG----TC--CEEECCCSSCC---HHHHHHHHHHHCSSSEEEEEE
T ss_pred HHHHHHHHHHh---CCEEEEEeCcHHH------hhcC----Cc--eEEecCCCCCC---cHHHHHHHHHHcCCCCEEEEe
Confidence 45566666544 2467777654332 1111 23 233322 2334 567788888888889999999
Q ss_pred CCCCC-ChHHHHH-HH
Q psy11373 164 SGIRM-KEDTLLD-MV 177 (539)
Q Consensus 164 aD~~~-~p~~L~~-lv 177 (539)
+|... +++.+++ ++
T Consensus 105 ~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 105 GDLPLMKKETVLYVLE 120 (201)
T ss_dssp TTCTTCCHHHHHHHHH
T ss_pred CCcCcCCHHHHHHHHh
Confidence 99964 9999999 87
No 58
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=56.19 E-value=34 Score=35.75 Aligned_cols=99 Identities=19% Similarity=0.258 Sum_probs=62.2
Q ss_pred EEecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhc
Q psy11373 75 LKPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAA 154 (539)
Q Consensus 75 IIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a 154 (539)
++|+.|. +-|...|+.+.+... -+|+++.....|.-.+.+.+....+ ..+++++.+.+..| =++|+..+....
T Consensus 34 l~pv~gk-p~i~~~l~~~~~~g~--~~i~vv~~~~~~~i~~~~~~~~~~~-~~~i~~~~q~~~lG---Ta~Av~~a~~~l 106 (501)
T 3st8_A 34 LHTLAGR-SMLSHVLHAIAKLAP--QRLIVVLGHDHQRIAPLVGELADTL-GRTIDVALQDRPLG---TGHAVLCGLSAL 106 (501)
T ss_dssp GCEETTE-EHHHHHHHHHHHHCC--SEEEEEECTTHHHHHHHHHHHHHHH-TSCCEEEECSSCCC---HHHHHHHHHTTS
T ss_pred HeEECCh-hHHHHHHHHHHhCCC--CEEEEEeCCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCC---cHHHHHHHHHHh
Confidence 5667664 477888888876532 4777777654443333343332222 23456667777778 467777777665
Q ss_pred CC---cEEEEEcCCC-CCChHHHHHHHHhh
Q psy11373 155 KY---ELILISDSGI-RMKEDTLLDMVNHL 180 (539)
Q Consensus 155 ~~---d~i~~lDaD~-~~~p~~L~~lv~~~ 180 (539)
+. +.++++..|+ ...++.+..+++..
T Consensus 107 ~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h 136 (501)
T 3st8_A 107 PDDYAGNVVVTSGDTPLLDADTLADLIATH 136 (501)
T ss_dssp CTTCCSEEEEEETTCTTCCHHHHHHHHHHH
T ss_pred ccccccceeeecCcceeecHHHHHHHHHHH
Confidence 33 3566666666 55889999998876
No 59
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=54.26 E-value=30 Score=31.56 Aligned_cols=92 Identities=18% Similarity=0.183 Sum_probs=54.4
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCC-Cc--eEEEEecCcccCcchhhhhHHHHHHhc--
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYP-NV--DTSVFIGGQVVGVNPKINNMEPGYKAA-- 154 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p-~~--~~~~~~~~~~~g~~~K~~al~~g~~~a-- 154 (539)
++.+-|..+++.+.+...- -+|+++.+... .+.++++..+++ .+ ....... ..| ...++..|++..
T Consensus 29 ~g~pli~~~l~~l~~~~~~-~~i~vv~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~i~~~l~~~~~ 99 (236)
T 2vsh_A 29 GDRPILIHTIEKFVLEPSI-EKIVVGVHGDW---VSHAEDLVDKYLPLYKERIIITKG--GAD---RNTSIKNIIEAIDA 99 (236)
T ss_dssp TTEEHHHHHHHHHHTCTTC-CCEEEEECGGG---HHHHHHHHHHHCGGGGGGEEEEEC--CSS---HHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHcCCCC-CeEEEEeCHHH---HHHHHHHHHhccccccCceEEECC--CCc---hHHHHHHHHHHHHh
Confidence 4557888999998764221 36666665432 123333333322 01 1121111 112 455566666654
Q ss_pred -----CCcEEEEEcCCC-CCChHHHHHHHHhh
Q psy11373 155 -----KYELILISDSGI-RMKEDTLLDMVNHL 180 (539)
Q Consensus 155 -----~~d~i~~lDaD~-~~~p~~L~~lv~~~ 180 (539)
..|+++++++|. .++++.++++++.+
T Consensus 100 ~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~ 131 (236)
T 2vsh_A 100 YRPLTPEDIVVTHDSVRPFITLRMIQDNIQLA 131 (236)
T ss_dssp HSCCCTTCEEEEEETTCTTCCHHHHHHHHHHH
T ss_pred hccCCCCCEEEEecCCcccCCHHHHHHHHHHH
Confidence 348999999999 56999999999887
No 60
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=51.78 E-value=34 Score=30.94 Aligned_cols=89 Identities=18% Similarity=0.227 Sum_probs=55.8
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhc-CCcE
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAA-KYEL 158 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a-~~d~ 158 (539)
++.+-+..+++.+.+.... -+|+++.+... .+.+++... .. .+.++..+ .+ ....+..|++.. +.|+
T Consensus 28 ~g~pli~~~l~~l~~~~~~-~~i~vv~~~~~---~~~~~~~~~-~~--~v~~~~~~--~~---~~~~i~~al~~~~~~~~ 95 (223)
T 2xwl_A 28 GGTPLLEHALSGLRASGVI-DRIVIAVPPAL---TDESKLVFG-GE--DSVIVSGG--VD---RTESVALALEAAGDAEF 95 (223)
T ss_dssp TTEEHHHHHHHHHHHHSCC-SEEEEEECGGG---HHHHHHHTC-BT--TEEEEECC--SS---HHHHHHHHHTTCTTCSE
T ss_pred CCeEHHHHHHHHHhcCCCC-CeEEEEEcccH---HHHHHHHhc-cC--CeEEEcCC--CC---HHHHHHHHHHhcCCCCE
Confidence 3457788888888764321 36676665322 233333321 12 23333322 22 356677788777 7799
Q ss_pred EEEEcCCCC-CChHHHHHHHHhh
Q psy11373 159 ILISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 159 i~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
++++++|.- ++++.++++++.+
T Consensus 96 vlv~~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 96 VLVHDAARALTPPALIARVVAAL 118 (223)
T ss_dssp EEECCTTCTTCCHHHHHHHHHHH
T ss_pred EEEEcCCcccCCHHHHHHHHHHH
Confidence 999999995 5999999999876
No 61
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=51.64 E-value=60 Score=30.97 Aligned_cols=115 Identities=10% Similarity=0.055 Sum_probs=63.7
Q ss_pred EEEEEecC-CChhhHHHHHHHHHcCCCC-CeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCc-cc-Ccc-hhhhh
Q psy11373 72 VTILKPLT-GTDPNLYSNLETFFTMSYP-KYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQ-VV-GVN-PKINN 146 (539)
Q Consensus 72 VSIIIP~~-ne~~~l~~~L~Sl~~q~yp-~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~-~~-g~~-~K~~a 146 (539)
+.|++.+= |-...+..++.|+++..-. ++.+.++.|+-+++..+.++++...+ +.+++.+.-+. .. +.. .+...
T Consensus 6 i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~s 84 (276)
T 3tzt_A 6 DALLLTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKF-SYTLYPIRATDDLFSFAKVTDRYP 84 (276)
T ss_dssp EEEEEECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTT-TCEEEEEECC-------------C
T ss_pred EEEEEEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHc-CCEEEEEEeCHHHHhcCccccccC
Confidence 66776653 3446678889999875432 58888888887777778888876654 34555443222 11 100 00001
Q ss_pred HHHHHH-----hc--CCcEEEEEcCCCCCChHHHHHHHH-hh-CCCeeEEE
Q psy11373 147 MEPGYK-----AA--KYELILISDSGIRMKEDTLLDMVN-HL-KPGVGLVH 188 (539)
Q Consensus 147 l~~g~~-----~a--~~d~i~~lDaD~~~~p~~L~~lv~-~~-~~~vg~V~ 188 (539)
...-.+ .- ..|-++.+|+|+.+-.+. +++.+ .+ +..+|+|.
T Consensus 85 ~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di-~~L~~~dl~~~~~aav~ 134 (276)
T 3tzt_A 85 KEMYYRLLAGEFLPENLGEILYLDPDMLVINPL-DDLLRTDISDYILAAAS 134 (276)
T ss_dssp HHHHHHHTHHHHSCTTCCEEEEECSSEEECSCS-HHHHTCCCTTSSEEEEE
T ss_pred HHHHHHHHHHHHcccccCeEEEEeCCeeecCCH-HHHhhcCCCCCeEEEEE
Confidence 111111 11 579999999999985442 33332 33 23455554
No 62
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=51.29 E-value=52 Score=30.22 Aligned_cols=77 Identities=14% Similarity=0.227 Sum_probs=51.9
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhcCCcEE
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAAKYELI 159 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a~~d~i 159 (539)
++.+-++.+++.+.+.. . +|+++.+. +.. ++ +- .+++ ....| -.+++..|++..+ |.+
T Consensus 30 ~g~pll~~~l~~l~~~~--~-~ivvv~~~--~~i----~~----~~--~~~~---~~~~g---~~~~i~~a~~~~~-~~~ 87 (232)
T 2dpw_A 30 RGRPMVEWVLEALYAAG--L-SPVYVGEN--PGL----VP----AP--ALTL---PDRGG---LLENLEQALEHVE-GRV 87 (232)
T ss_dssp TTEETHHHHHHHHHHTT--C-EEEEESCC--SSC----SS----CC--SEEE---CCCSS---HHHHHHHHHHTCC-SEE
T ss_pred CCEEHHHHHHHHHHhcC--C-EEEEEeCh--HHH----hh----hc--CeEe---cCCCC---HHHHHHHHHHHcC-CCE
Confidence 45678888999987653 3 78777432 221 11 11 2332 33334 4667778887777 899
Q ss_pred EEEcCCCC-CChHHHHHHHH
Q psy11373 160 LISDSGIR-MKEDTLLDMVN 178 (539)
Q Consensus 160 ~~lDaD~~-~~p~~L~~lv~ 178 (539)
+++++|.. ++++.++++++
T Consensus 88 lv~~~D~P~~~~~~i~~l~~ 107 (232)
T 2dpw_A 88 LVATGDIPHLTEEAVRFVLD 107 (232)
T ss_dssp EEEETTCTTCCHHHHHHHHH
T ss_pred EEEeCCcccCCHHHHHHHHh
Confidence 99999996 59999999998
No 63
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=48.19 E-value=56 Score=32.81 Aligned_cols=85 Identities=13% Similarity=0.226 Sum_probs=55.2
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhcCCcEE
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAAKYELI 159 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a~~d~i 159 (539)
++.+-++.+++.+.+... --+|+++.+ . .+.++++. ..+ .++.. ..| ....+..|++..+.|++
T Consensus 29 ~GkPLi~~~l~~l~~~~~-~~~IvVvt~-~----~~~i~~~~---~~v--~~v~~--g~g---~~~sv~~aL~~l~~d~v 92 (371)
T 1w55_A 29 GNDPLWLYATKNLSSFYP-FKKIVVTSS-N----ITYMKKFT---KNY--EFIEG--GDT---RAESLKKALELIDSEFV 92 (371)
T ss_dssp BTEEHHHHHHHHHHTTSC-CSCEEEEES-C----HHHHHTTC---SSS--EEEEC--CSS---HHHHHHHHHTTCCSSEE
T ss_pred CCeEHHHHHHHHHHccCC-CCeEEEEcC-C----HHHHHHHh---CCC--EEEeC--CCC---hHHHHHHHHHhcCCCeE
Confidence 355678889998875322 136777766 1 23333321 223 33321 122 45677778887778999
Q ss_pred EEEcCCCC-CChHHHHHHHHhh
Q psy11373 160 LISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 160 ~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
+++|+|.- ++++.++++++.+
T Consensus 93 lv~~~D~Pli~~~~i~~li~~~ 114 (371)
T 1w55_A 93 MVSDVARVLVSKNLFDRLIENL 114 (371)
T ss_dssp EEEETTCTTCCHHHHHHHHTTG
T ss_pred EEEeCCcccCCHHHHHHHHHHH
Confidence 99999995 5999999999887
No 64
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=47.93 E-value=28 Score=33.50 Aligned_cols=90 Identities=10% Similarity=-0.019 Sum_probs=55.8
Q ss_pred hhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHh---------------------C-CCceEEEEecCcccC
Q psy11373 82 DPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKK---------------------Y-PNVDTSVFIGGQVVG 139 (539)
Q Consensus 82 ~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~---------------------~-p~~~~~~~~~~~~~g 139 (539)
.+-|...++.+.+... -+|+++.+...+ .+++...+ . ...++.++..+...|
T Consensus 45 kpli~~~l~~l~~~g~--~~i~vv~~~~~~----~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~i~~~~~~~~~G 118 (297)
T 2ux8_A 45 RPLIQYAVDEAVEAGI--EQMIFVTGRGKS----ALEDHFDIAYELEATMAARGKSLDVLDGTRLKPGNIAYVRQQEPMG 118 (297)
T ss_dssp EEHHHHHHHHHHHTTC--CEEEEEECTTCH----HHHHHTSCCHHHHHHHHTTTCCGGGGTTSCCSTTSEEEEECCSCCC
T ss_pred eEHHHHHHHHHHhCCC--CEEEEEeCCCHH----HHHHHHhhhhhhhhhhhhccchhhhhhhcccCCCceEEEeCCCCCC
Confidence 3667888888876532 367777664322 22222111 1 123444444444445
Q ss_pred cchhhhhHHHHHHhcCCcEEEEEcCCCCCC--hHHHHHHHHhh
Q psy11373 140 VNPKINNMEPGYKAAKYELILISDSGIRMK--EDTLLDMVNHL 180 (539)
Q Consensus 140 ~~~K~~al~~g~~~a~~d~i~~lDaD~~~~--p~~L~~lv~~~ 180 (539)
-+.++..+....+.+.++++.+|.... +..++++++..
T Consensus 119 ---t~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~ 158 (297)
T 2ux8_A 119 ---LGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAY 158 (297)
T ss_dssp ---HHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHH
T ss_pred ---hHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHH
Confidence 466666666665668899999999987 68899998876
No 65
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=46.93 E-value=41 Score=32.51 Aligned_cols=97 Identities=10% Similarity=0.149 Sum_probs=56.6
Q ss_pred EEecC-CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHH-HHHhCC-CceEEEEecC---------------c
Q psy11373 75 LKPLT-GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEK-LCKKYP-NVDTSVFIGG---------------Q 136 (539)
Q Consensus 75 IIP~~-ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~-l~~~~p-~~~~~~~~~~---------------~ 136 (539)
++|+- +..+-|..+|+.+.+... -+|+++..... .+.+++ +....+ +.++..+.++ .
T Consensus 25 l~~ig~~g~pli~~~l~~~~~~~~--~~i~vv~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 99 (303)
T 3pnn_A 25 LDGIGPGGDTIMDYSVYDAIRAGF--GRLVFVIRHSF---EKEFREKILTKYEGRIPVELVFQELDRLPEGFSCPEGREK 99 (303)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHHTC--CEEEEEECGGG---HHHHHHHTHHHHTTTSCEEEEECCTTCCCTTCCCCTTCCS
T ss_pred EeEcCCCCeeHHHHHHHHHHHCCC--CeEEEEcCchH---HHHHHHHHHHHhccCCcEEEEecccccccccccccccccc
Confidence 45663 455788888988866432 46777765331 122222 222221 2334444443 2
Q ss_pred ccCcchhhhhHHHHHHhcCCcEEEEEcCCCCCChHHHHHHHHhh
Q psy11373 137 VVGVNPKINNMEPGYKAAKYELILISDSGIRMKEDTLLDMVNHL 180 (539)
Q Consensus 137 ~~g~~~K~~al~~g~~~a~~d~i~~lDaD~~~~p~~L~~lv~~~ 180 (539)
..| -++++..+....+.+ ++++.+|...+++.++++++..
T Consensus 100 ~~G---t~~al~~a~~~i~~~-~lV~~gD~l~~~~~~~~l~~~~ 139 (303)
T 3pnn_A 100 PWG---TNHAVLMGRDAIREP-FAVINADDFYGRNGFEVLARKL 139 (303)
T ss_dssp CCC---HHHHHHTTTTTCCSC-EEEEESSCBCCHHHHHHHHHHH
T ss_pred cCC---cHHHHHHHHHhcCCC-EEEEECCeecCHHHHHHHHHHH
Confidence 333 456666665555545 4566899988999999999886
No 66
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=45.91 E-value=47 Score=32.24 Aligned_cols=107 Identities=7% Similarity=-0.040 Sum_probs=57.9
Q ss_pred CChhhHHHHHHHH-HcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecC-cc-------cC-cchhhhhHHH
Q psy11373 80 GTDPNLYSNLETF-FTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGG-QV-------VG-VNPKINNMEP 149 (539)
Q Consensus 80 ne~~~l~~~L~Sl-~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~-~~-------~g-~~~K~~al~~ 149 (539)
|-...+..++.|+ ++..-.++.+.+++|+-+++..+.++++...+. ..++.+.-+ +. .+ .+.-......
T Consensus 10 ~Y~~~~~vli~Sl~l~~~~~~~~f~il~~~ls~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ 88 (311)
T 1g9r_A 10 NYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGG-GNIRFIDVNPEDFAGFPLNIRHISITTYARLK 88 (311)
T ss_dssp GGHHHHHHHHHHHHHTCTTSCCEEEEEESSCCHHHHHHHHHHSGGGT-TTEEEEECCGGGGTTSCCCCTTCCGGGGGGGG
T ss_pred hHHHHHHHHHHHHHHHcCCCCceEEEEECCCCHHHHHHHHHHHHHcC-CEEEEEEcCHHHHhcCccccccCCHHHHHHHH
Confidence 3445678889999 654433588888888777777777877755432 233433211 10 00 0000110001
Q ss_pred HHH-hcCCcEEEEEcCCCCCChHHHHHHHHh-h-CCCeeEEE
Q psy11373 150 GYK-AAKYELILISDSGIRMKEDTLLDMVNH-L-KPGVGLVH 188 (539)
Q Consensus 150 g~~-~a~~d~i~~lDaD~~~~p~~L~~lv~~-~-~~~vg~V~ 188 (539)
.-. ..+.|-++.+|+|+.+-.| ++++.+. + +..+++|.
T Consensus 89 l~~ll~~~~kvlyLD~D~iv~~d-i~eL~~~~l~~~~~aav~ 129 (311)
T 1g9r_A 89 LGEYIADCDKVLYLDIDVLVRDS-LTPLWDTDLGDNWLGASI 129 (311)
T ss_dssp HHHHCCSCSCEEEECSSEEECSC-CHHHHTCCCTTCSEEEEE
T ss_pred HHHHhhhcCEEEEEcCCeEeccC-HHHHhccCCCCcEEEEEe
Confidence 111 1377999999999998655 3344332 3 23345443
No 67
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=42.67 E-value=63 Score=29.39 Aligned_cols=90 Identities=11% Similarity=0.109 Sum_probs=52.6
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhc---CC
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAA---KY 156 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a---~~ 156 (539)
++.+-|+.+++.+.+.... -+|+|+.+... .+.++++.. +. ..+.... |.......+..|++.. ..
T Consensus 39 ~Gkpli~~~i~~l~~~~~~-~~ivVv~~~~~---~~~~~~~~~-~~-~~~~~~~-----gg~~~~~sv~~al~~~~~~~~ 107 (234)
T 1vpa_A 39 EGRMLFEYPLSTFLKSEAI-DGVVIVTRREW---FEVVEKRVF-HE-KVLGIVE-----GGDTRSQSVRSALEFLEKFSP 107 (234)
T ss_dssp TTEETTHHHHHHHHHCTTC-SEEEEEECGGG---HHHHHTTCC-CT-TEEEEEE-----CCSSHHHHHHHHHHHHGGGCC
T ss_pred CCeEHHHHHHHHHHcCCCC-CeEEEEEChHH---HHHHHHHhc-cC-CceEEeC-----CCCcHHHHHHHHHHHhhhcCC
Confidence 4456778888888764322 36777765322 222232211 11 1221111 1111344566677655 46
Q ss_pred cEEEEEcCCCC-CChHHHHHHHHhh
Q psy11373 157 ELILISDSGIR-MKEDTLLDMVNHL 180 (539)
Q Consensus 157 d~i~~lDaD~~-~~p~~L~~lv~~~ 180 (539)
|+++++++|.- ++++.++++++.+
T Consensus 108 ~~vlv~~~D~Pli~~~~i~~l~~~~ 132 (234)
T 1vpa_A 108 SYVLVHDSARPFLRKKHVSEVLRRA 132 (234)
T ss_dssp SEEEEEETTSCCCCHHHHHHHHHHH
T ss_pred CEEEEecCcccCCCHHHHHHHHHHH
Confidence 89999999994 6999999999877
No 68
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=42.33 E-value=1.9e+02 Score=28.98 Aligned_cols=107 Identities=10% Similarity=0.039 Sum_probs=64.0
Q ss_pred CCcEEEEEecCCChhhHHHHHHHHHcCCCCCeEEEEEeC-CCCCCcHHHHHHHHHhCCCceEEEEecCcccCcch--hh-
Q psy11373 69 YPGVTILKPLTGTDPNLYSNLETFFTMSYPKYEICFCLE-DDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNP--KI- 144 (539)
Q Consensus 69 ~p~VSIIIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd-~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~--K~- 144 (539)
..+++.+|-+++..+.+++.++.+ ..|+..++|-.| .+++...+.++++...++++.+ ........+++ -.
T Consensus 83 ~~kiAflil~h~d~~~l~rll~~l---y~p~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~v--~~~~~~v~WGg~S~v~ 157 (391)
T 2gak_A 83 GFPIAYSIVVHHKIEMLDRLLRAI---YMPQNFYCIHVDRKAEESFLAAVQGIASCFDNVFV--ASQLESVVYASWTRVK 157 (391)
T ss_dssp TSCEEEEEEECSCHHHHHHHHHHH---CCTTSEEEEEECTTSCHHHHHHHHHHHHTCTTEEE--CSSCCCCCTTSHHHHH
T ss_pred CCCEEEEEEecCCHHHHHHHHHHH---hCCCCeEEEEEeCCCCHHHHHHHHHHHhcCCCEEE--eccCcccccCCchHHH
Confidence 457999999999887777777776 335545555555 4444444455555566787632 22222222211 11
Q ss_pred ---hhHHHHHHhc-CCcEEEEEcCCCCC--ChHHHHHHHHhh
Q psy11373 145 ---NNMEPGYKAA-KYELILISDSGIRM--KEDTLLDMVNHL 180 (539)
Q Consensus 145 ---~al~~g~~~a-~~d~i~~lDaD~~~--~p~~L~~lv~~~ 180 (539)
+.+..+++.. +.+|++.+-+.+.+ +.+.|.+.+...
T Consensus 158 A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~~ 199 (391)
T 2gak_A 158 ADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCS 199 (391)
T ss_dssp HHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHhc
Confidence 2333344433 78888888888876 777787777764
No 69
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=41.65 E-value=44 Score=30.53 Aligned_cols=86 Identities=5% Similarity=-0.009 Sum_probs=50.6
Q ss_pred hhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcc-cCcchhhhhHHHHHHhcCCcEEE
Q psy11373 82 DPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQV-VGVNPKINNMEPGYKAAKYELIL 160 (539)
Q Consensus 82 ~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~-~g~~~K~~al~~g~~~a~~d~i~ 160 (539)
.+-++.+++.+.+. --+|+++. ... .++.+.+.+++. .++.++.++.. .| -..++..|++..+.+ ++
T Consensus 45 ~pli~~~l~~l~~~---~~~i~vv~-~~~---~~~~~~~~~~~~-~~~~~v~~~~~~~g---~~~~i~~a~~~~~~~-~l 112 (232)
T 2xme_A 45 CEIILRTMKLLSPH---VSEFIIVA-SRY---ADDIDAFLKDKG-FNYKIVRHDRPEKG---NGYSLLVAKNHVEDR-FI 112 (232)
T ss_dssp EEHHHHHHHHHGGG---EEEEEEEE-STT---HHHHHHHHTTSC-CCEEEEECSCGGGC---HHHHHHTTGGGCCSS-EE
T ss_pred EEHHHHHHHHHHHh---CCEEEEEe-CCh---HHHHHHHHHhcC-CcEEEEECCCCCCC---cHHHHHHHHHHCCCC-EE
Confidence 45678888888654 24666666 322 233444333332 23444443332 34 356666677666644 55
Q ss_pred EEcCCCCCChHHHHHHHHh
Q psy11373 161 ISDSGIRMKEDTLLDMVNH 179 (539)
Q Consensus 161 ~lDaD~~~~p~~L~~lv~~ 179 (539)
++.+|...+++.++++++.
T Consensus 113 v~~~D~p~~~~~~~~l~~~ 131 (232)
T 2xme_A 113 LTMGDHVYSQQFIEKAVRG 131 (232)
T ss_dssp EEETTEEECHHHHHHHTTC
T ss_pred EEcCCcccCHHHHHHHHhC
Confidence 7889998888888887653
No 70
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=41.39 E-value=54 Score=31.40 Aligned_cols=91 Identities=12% Similarity=0.130 Sum_probs=56.2
Q ss_pred ChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHh------------------------CCCceEEEEecCc
Q psy11373 81 TDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKK------------------------YPNVDTSVFIGGQ 136 (539)
Q Consensus 81 e~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~------------------------~p~~~~~~~~~~~ 136 (539)
..+-|..+|+.+.+... -+|+++.+...+ + +++.... ....++.++....
T Consensus 38 gkpli~~~l~~l~~~gi--~~i~vv~~~~~~---~-i~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~ 111 (302)
T 2e3d_A 38 DKPLIQYVVNECIAAGI--TEIVLVTHSSKN---S-IENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQGL 111 (302)
T ss_dssp TEEHHHHHHHHHHHTTC--CEEEEEECGGGH---H-HHHHHSCCHHHHHHHC----CHHHHHHHHTSCTTCEEEEEECSS
T ss_pred CeEHHHHHHHHHHHCCC--CEEEEEeCCCHH---H-HHHHHhcchhhhhhhhhccchhhhhhhhhccccCcceEEeeCCc
Confidence 34778889998876532 367777654322 2 2222111 0133444445555
Q ss_pred ccCcchhhhhHHHHHHhcCCcEEEEEcCCCCCC----hH---HHHHHHHhh
Q psy11373 137 VVGVNPKINNMEPGYKAAKYELILISDSGIRMK----ED---TLLDMVNHL 180 (539)
Q Consensus 137 ~~g~~~K~~al~~g~~~a~~d~i~~lDaD~~~~----p~---~L~~lv~~~ 180 (539)
..| -++++..+......+.++++.+|.... +. .++++++..
T Consensus 112 ~~G---t~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~ 159 (302)
T 2e3d_A 112 AKG---LGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRF 159 (302)
T ss_dssp CCC---HHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHH
T ss_pred cCC---HHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHH
Confidence 555 466777777666667889999999986 45 789988876
No 71
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=40.37 E-value=11 Score=35.39 Aligned_cols=44 Identities=11% Similarity=-0.251 Sum_probs=30.5
Q ss_pred cccceeeEehHHHHHhCCCccccccchhhhhhhhhhhhhhhc-------ccCCcceecc
Q psy11373 244 FTGMSTLTRKSIFDELGGIKTFGCYLAEERMKEDTLLDMVNH-------LKPGVGLVHQ 295 (539)
Q Consensus 244 ~~G~~~~~rr~~~~~vGgf~~~~~~~~ed~~~~di~~~~~~~-------~~p~~~~~~~ 295 (539)
.+|+++++||+. +|||++.. ++|..+|+|+++|.. ..|. .+.|.
T Consensus 153 ~~g~~~~~rr~~---~~gFDe~~----~~~~~~D~Dl~~R~~~~G~~~~~~p~-~v~H~ 203 (249)
T 2nxv_A 153 LDECFLLMRRLK---PVLNSYDM----QGFHYYGADLCLQAEFLGGRAYAIDF-HLHHY 203 (249)
T ss_dssp ECTTEEEEETTB---CCCCCSSC----CSSSSHHHHHHHHHHHTTCEEEECCC-CCEEC
T ss_pred eeeEeeEEEHhh---hCCCCCCC----CCcceehhHHHHHHHHcCCeEEEecc-EEEEC
Confidence 579999999999 78898621 234456788887765 4454 36675
No 72
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=36.14 E-value=80 Score=28.20 Aligned_cols=92 Identities=9% Similarity=0.046 Sum_probs=56.7
Q ss_pred CChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhcCCcEE
Q psy11373 80 GTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAAKYELI 159 (539)
Q Consensus 80 ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a~~d~i 159 (539)
++.+-++.+++.+... --+|+++.+... + ++. + ..+ .++..... +..+-...+..|++..+.|++
T Consensus 31 ~G~pli~~~l~~l~~~---~~~ivvv~~~~~----~---~~~-~-~~~--~~v~~~~~-~~~G~~~si~~~l~~~~~~~v 95 (201)
T 1e5k_A 31 NGKPLWQHVADALMTQ---LSHVVVNANRHQ----E---IYQ-A-SGL--KVIEDSLA-DYPGPLAGMLSVMQQEAGEWF 95 (201)
T ss_dssp TTEEHHHHHHHHHHHH---CSCEEEECSSSH----H---HHH-T-TSC--CEECCCTT-CCCSHHHHHHHHHHHCCSSEE
T ss_pred CceeHHHHHHHHHHhh---CCEEEEEcCCcH----H---HHh-h-cCC--eEEecCCC-CCCCHHHHHHHHHHhCCCCcE
Confidence 3456778888887642 136776654321 1 121 1 223 23333222 212256778888888889999
Q ss_pred EEEcCCC-CCChHHHHHHHHhhCCCeeEE
Q psy11373 160 LISDSGI-RMKEDTLLDMVNHLKPGVGLV 187 (539)
Q Consensus 160 ~~lDaD~-~~~p~~L~~lv~~~~~~vg~V 187 (539)
+++++|. .++++.++++++. ..+..++
T Consensus 96 lv~~~D~P~i~~~~i~~l~~~-~~~~~~~ 123 (201)
T 1e5k_A 96 LFCPCDTPYIPPDLAARLNHQ-RKDAPVV 123 (201)
T ss_dssp EEEETTCTTCCTTHHHHHHHT-CTTCSEE
T ss_pred EEEeCCcCcCCHHHHHHHHhh-cCCCCEE
Confidence 9999999 5699999999886 4443333
No 73
>2bn5_B U1 small nuclear ribonucleoprotein 70 kDa; nuclear protein, splicing, protein-protein interaction, structure, proline-rich peptide; NMR {Drosophila melanogaster}
Probab=34.52 E-value=12 Score=21.41 Aligned_cols=11 Identities=55% Similarity=1.220 Sum_probs=8.1
Q ss_pred cceeecCCCCC
Q psy11373 522 WYLFTVPPPPP 532 (539)
Q Consensus 522 ~~~~~~~~~~~ 532 (539)
-..|++||||-
T Consensus 7 hnmfsvppppi 17 (26)
T 2bn5_B 7 HNMFSVPPPPI 17 (26)
T ss_dssp CCCCSCCCCSC
T ss_pred CceecCCCCCc
Confidence 45688998874
No 74
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=30.69 E-value=1.7e+02 Score=27.93 Aligned_cols=97 Identities=14% Similarity=0.105 Sum_probs=54.3
Q ss_pred EEecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhC--CCceEEEEecCcccCcchhhhhHHHHHH
Q psy11373 75 LKPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKY--PNVDTSVFIGGQVVGVNPKINNMEPGYK 152 (539)
Q Consensus 75 IIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~--p~~~~~~~~~~~~~g~~~K~~al~~g~~ 152 (539)
++|+.| .+-|...|+.+.+... -+|+++....+ .+.++++..+. -.+++.+...+...| -+.++..+.+
T Consensus 27 llpi~g-kpli~~~l~~l~~~gi--~~I~vv~~~~~---~~~i~~~l~~g~~~g~~i~~~~~~~~~G---~~~al~~a~~ 97 (293)
T 1fxo_A 27 LLPVYD-KPMIYYPLSTLMLAGI--REILIISTPQD---TPRFQQLLGDGSNWGLDLQYAVQPSPDG---LAQAFLIGES 97 (293)
T ss_dssp GSEETT-EETTHHHHHHHHHTTC--CEEEEEECTTT---HHHHHHHHTTSGGGTCEEEEEECSSCCC---GGGHHHHTHH
T ss_pred eCeECC-EeHHHHHHHHHHHCCC--CEEEEEecccc---HHHHHHHHhcccccCceEEEeeCCCCCC---HHHHHHHHHH
Confidence 345565 3778888888876432 36766653322 12333433321 123444444444445 4666667766
Q ss_pred hcCCcEEEEEcCCCCCChHHHHHHHHhh
Q psy11373 153 AAKYELILISDSGIRMKEDTLLDMVNHL 180 (539)
Q Consensus 153 ~a~~d~i~~lDaD~~~~p~~L~~lv~~~ 180 (539)
....|-++++.+|....+..+.++++.+
T Consensus 98 ~i~~~~~~lv~gD~~~~~~~l~~~l~~~ 125 (293)
T 1fxo_A 98 FIGNDLSALVLGDNLYYGHDFHELLGSA 125 (293)
T ss_dssp HHTTSEEEEEETTEEEECTTHHHHHHHH
T ss_pred HhCCCCEEEEECChhccCccHHHHHHHH
Confidence 6554555555599876435678887766
No 75
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=30.58 E-value=1.4e+02 Score=28.91 Aligned_cols=50 Identities=4% Similarity=-0.057 Sum_probs=33.7
Q ss_pred eEEEEecCcccCcchhhhhHHHHHHhcC--CcEEEEEcCCCCCC-hHHHHHHHHhh
Q psy11373 128 DTSVFIGGQVVGVNPKINNMEPGYKAAK--YELILISDSGIRMK-EDTLLDMVNHL 180 (539)
Q Consensus 128 ~~~~~~~~~~~g~~~K~~al~~g~~~a~--~d~i~~lDaD~~~~-p~~L~~lv~~~ 180 (539)
++.++..+...| -+.++..+..... .|+++++.+|...+ +..++++++.+
T Consensus 106 ~i~~~~~~~~~G---t~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~ 158 (323)
T 2pa4_A 106 KAVPVTQDKPLG---LGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVR 158 (323)
T ss_dssp EEEEEECSSCCC---HHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHH
T ss_pred ceEEEeCCccCC---cHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHH
Confidence 344444444445 4666666665543 35588999999986 58899999877
No 76
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=30.09 E-value=62 Score=29.32 Aligned_cols=77 Identities=14% Similarity=0.067 Sum_probs=50.5
Q ss_pred EEecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhc
Q psy11373 75 LKPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAA 154 (539)
Q Consensus 75 IIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a 154 (539)
|||+-...+.++++++| +.+++++-++.-....++++.+.+.- . ..++..+--.|.+.+..++..--+..
T Consensus 12 iI~Avr~~~~l~~al~s-------~~~~ifll~g~i~~l~~~v~~lk~~~-K--~v~Vh~Dli~Gls~d~~ai~fL~~~~ 81 (192)
T 3kts_A 12 IIPAAHNQKDMEKILEL-------DLTYMVMLETHVAQLKALVKYAQAGG-K--KVLLHADLVNGLKNDDYAIDFLCTEI 81 (192)
T ss_dssp EEEEESSSHHHHHHTTS-------SCCEEEECSEETTTHHHHHHHHHHTT-C--EEEEEGGGEETCCCSHHHHHHHHHTT
T ss_pred EEEEecCHHHHHHHHcC-------CCCEEEEecCcHHHHHHHHHHHHHcC-C--eEEEecCchhccCCcHHHHHHHHhCC
Confidence 56665555566666543 25788888887777778888775543 2 23457777788877877776655544
Q ss_pred CCcEEEE
Q psy11373 155 KYELILI 161 (539)
Q Consensus 155 ~~d~i~~ 161 (539)
+-|.|+-
T Consensus 82 ~pdGIIs 88 (192)
T 3kts_A 82 CPDGIIS 88 (192)
T ss_dssp CCSEEEE
T ss_pred CCCEEEe
Confidence 6666654
No 77
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=28.44 E-value=18 Score=33.44 Aligned_cols=20 Identities=15% Similarity=0.303 Sum_probs=18.0
Q ss_pred ccccceeeEehHHHHHhC-CC
Q psy11373 243 PFTGMSTLTRKSIFDELG-GI 262 (539)
Q Consensus 243 ~~~G~~~~~rr~~~~~vG-gf 262 (539)
...|+++++||++++++| ||
T Consensus 155 ~~~~~~~~~rr~~~~~~g~~f 175 (255)
T 1qg8_A 155 AIDHCSVMHRYSVLEKVKEKF 175 (255)
T ss_dssp TSCGGGEEEETHHHHHHHHHH
T ss_pred CCccceEEEEHHHHHhhcccc
Confidence 467899999999999999 88
No 78
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=27.71 E-value=2.4e+02 Score=25.11 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=28.4
Q ss_pred hhhhHHHHHHhcCCcEEEEEcCCCCC-ChHHHHHHHH
Q psy11373 143 KINNMEPGYKAAKYELILISDSGIRM-KEDTLLDMVN 178 (539)
Q Consensus 143 K~~al~~g~~~a~~d~i~~lDaD~~~-~p~~L~~lv~ 178 (539)
-..++..+++.. .+.++++-+|+-. +++.++++++
T Consensus 76 l~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 76 LNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp HHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred HHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 456677777666 6889999999975 9999999987
No 79
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=25.14 E-value=2.8e+02 Score=26.41 Aligned_cols=96 Identities=15% Similarity=0.150 Sum_probs=54.1
Q ss_pred EEecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhC--CCceEEEEecCcccCcchhhhhHHHHHH
Q psy11373 75 LKPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKY--PNVDTSVFIGGQVVGVNPKINNMEPGYK 152 (539)
Q Consensus 75 IIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~--p~~~~~~~~~~~~~g~~~K~~al~~g~~ 152 (539)
++|+.| .+-|...|+.+.+... -+|+++....+ .+.++++..+. -.+++.++..+...| -+.++..+.+
T Consensus 28 llpi~g-kpli~~~l~~l~~~gi--~~Iivv~~~~~---~~~i~~~l~~g~~~g~~i~~~~~~~~~G---~~~al~~a~~ 98 (295)
T 1lvw_A 28 LLPIYD-KPMIYYPLSVLMLAGI--RDILIISTPRD---LPLYRDLLGDGSQFGVRFSYRVQEEPRG---IADAFIVGKD 98 (295)
T ss_dssp GSEETT-EETTHHHHHHHHHTTC--CEEEEEECTTT---HHHHHHHHTTSGGGTSEEEEEECSSCCC---GGGHHHHTHH
T ss_pred ecEECC-eeHHHHHHHHHHHCCC--CeEEEEeccch---HHHHHHHhhhccccCceEEEeeCCCCCC---hHHHHHHHHH
Confidence 456666 4778888888876432 36776653221 23334443321 123444444444445 4666666666
Q ss_pred hcC-CcEEEEEcCCCCCChHHHHHHHHhh
Q psy11373 153 AAK-YELILISDSGIRMKEDTLLDMVNHL 180 (539)
Q Consensus 153 ~a~-~d~i~~lDaD~~~~p~~L~~lv~~~ 180 (539)
... .+++++. +|....+..+.++++..
T Consensus 99 ~i~~~~~~lv~-gD~~~~~~~l~~~l~~~ 126 (295)
T 1lvw_A 99 FIGDSKVALVL-GDNVFYGHRFSEILRRA 126 (295)
T ss_dssp HHTTSCEEEEE-TTCCEECTTHHHHHHHH
T ss_pred HhCCCcEEEEE-CCccccCcCHHHHHHHH
Confidence 554 4566666 99876335677777766
No 80
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=24.61 E-value=1.2e+02 Score=28.16 Aligned_cols=91 Identities=9% Similarity=0.068 Sum_probs=52.3
Q ss_pred EecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhC--CCceEEEEecCcccCcchhhhhHHHHHHh
Q psy11373 76 KPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKY--PNVDTSVFIGGQVVGVNPKINNMEPGYKA 153 (539)
Q Consensus 76 IP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~--p~~~~~~~~~~~~~g~~~K~~al~~g~~~ 153 (539)
+|+.| .+-|+.+|+++.+.. .--+|++|.....+ ..+.+++...++ +.... ++.++...| -++++..+...
T Consensus 25 lpv~g-kpli~~~l~~l~~~~-gi~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~G---t~~av~~a~~~ 97 (255)
T 4evw_A 25 LEAHG-QTLFEHSVNSFAAYF-ASTPFLFIVRNVYD-TAVFVREKATQLGIKQFYI-AELHTETRG---QAETVTLGLEE 97 (255)
T ss_dssp CEETT-EEHHHHHHGGGGGGT-TTSCEEEEEESSTT-HHHHHHHHHHHHTCSSEEE-EEESSCCSS---HHHHHHHHHHH
T ss_pred cEECC-eEHHHHHHHHHhccC-CCceEEEEECchhh-hHHHHHHHHHHcCCCCceE-EEeCCCCCC---HHHHHHHHHHH
Confidence 45544 478899999887621 11356666554444 445555433332 23222 345555556 46777777766
Q ss_pred c------CCcEEEEEcCCCCCChHHH
Q psy11373 154 A------KYELILISDSGIRMKEDTL 173 (539)
Q Consensus 154 a------~~d~i~~lDaD~~~~p~~L 173 (539)
. ..+-++++++|+...+..+
T Consensus 98 l~~~~~~~~~~~lV~~gD~l~~~~~~ 123 (255)
T 4evw_A 98 LAKQGVDYQGSITVFNIDTFRPNFVF 123 (255)
T ss_dssp HHHTTCCCCSCEEECCTTEECTTCCC
T ss_pred HhhcccCCCCcEEEEeCCEEEecchh
Confidence 5 3556888999997744333
No 81
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=24.50 E-value=4e+02 Score=24.22 Aligned_cols=96 Identities=13% Similarity=0.195 Sum_probs=59.2
Q ss_pred cEEEEEecCCChhhHHHHHHHHHcCCCCCeEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHH
Q psy11373 71 GVTILKPLTGTDPNLYSNLETFFTMSYPKYEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPG 150 (539)
Q Consensus 71 ~VSIIIP~~ne~~~l~~~L~Sl~~q~yp~~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g 150 (539)
+.-|.|=+-+...++..+++.+.+... +.||..|.-+..|... + +.++++ ++.+. ....+.. +...+...
T Consensus 8 ~~ri~vl~SG~gsnl~all~~~~~~~~-~~~I~~Vis~~~~a~~--l-~~A~~~-gIp~~-~~~~~~~----~~~~~~~~ 77 (215)
T 3kcq_A 8 ELRVGVLISGRGSNLEALAKAFSTEES-SVVISCVISNNAEARG--L-LIAQSY-GIPTF-VVKRKPL----DIEHISTV 77 (215)
T ss_dssp CEEEEEEESSCCHHHHHHHHHTCCC-C-SEEEEEEEESCTTCTH--H-HHHHHT-TCCEE-ECCBTTB----CHHHHHHH
T ss_pred CCEEEEEEECCcHHHHHHHHHHHcCCC-CcEEEEEEeCCcchHH--H-HHHHHc-CCCEE-EeCcccC----ChHHHHHH
Confidence 445666667888999999999865544 3787776655444321 1 222232 23332 1222211 23556677
Q ss_pred HHhcCCcEEEEEcCCCCCChHHHHHH
Q psy11373 151 YKAAKYELILISDSGIRMKEDTLLDM 176 (539)
Q Consensus 151 ~~~a~~d~i~~lDaD~~~~p~~L~~l 176 (539)
++..+.|++++.-=--+++++.|+..
T Consensus 78 L~~~~~Dlivlagy~~IL~~~~l~~~ 103 (215)
T 3kcq_A 78 LREHDVDLVCLAGFMSILPEKFVTDW 103 (215)
T ss_dssp HHHTTCSEEEESSCCSCCCHHHHHHT
T ss_pred HHHhCCCEEEEeCCceEeCHHHHhhc
Confidence 78889999999888888899888763
No 82
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=23.98 E-value=17 Score=35.18 Aligned_cols=72 Identities=13% Similarity=-0.010 Sum_probs=52.8
Q ss_pred ccccchhhhchhhHhhhcchHHHH-HhhhHhHHHHHHHHHcCCceeee-----ccccc-cc------CCCCCHHHHHHHH
Q psy11373 332 CHTGMSTLTRKSIFDELGGIKTFG-CYLAEDLFFARALSELGWKITIS-----GQPAW-QN------SGYCDVTSFRNRL 398 (539)
Q Consensus 332 ~~~G~~~~~rr~~l~~~gg~~~~~-~~~~ED~~l~~~l~~~G~ri~~~-----~~~~~-~~------~~~~s~~~~~~qr 398 (539)
...|+++++||++++++|||+.-. ...+||.+++.|+.++|+++... +.... |. ..+..++.+.+++
T Consensus 173 ~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~ 252 (287)
T 2fy7_A 173 QYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTK 252 (287)
T ss_dssp TCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHH
T ss_pred ceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcc
Confidence 456999999999999999998532 22359999999999999998833 22222 11 2345577788889
Q ss_pred HHHHH
Q psy11373 399 SRWVK 403 (539)
Q Consensus 399 ~RW~r 403 (539)
.||.+
T Consensus 253 ~~~~~ 257 (287)
T 2fy7_A 253 ETMLS 257 (287)
T ss_dssp HHTTT
T ss_pred cEEcC
Confidence 99966
No 83
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=21.36 E-value=3e+02 Score=25.90 Aligned_cols=79 Identities=23% Similarity=0.328 Sum_probs=44.9
Q ss_pred eEEEEEeCCCCCCcHHHHHHHHHhCCCceEEEEecCcccCcchhhhhHHHHHHhcCCcEEEEEcCCC-CCChHHHHHHHH
Q psy11373 100 YEICFCLEDDVDPAVPLVEKLCKKYPNVDTSVFIGGQVVGVNPKINNMEPGYKAAKYELILISDSGI-RMKEDTLLDMVN 178 (539)
Q Consensus 100 ~eIIvvdd~s~D~t~~il~~l~~~~p~~~~~~~~~~~~~g~~~K~~al~~g~~~a~~d~i~~lDaD~-~~~p~~L~~lv~ 178 (539)
.++++|+++........+.+..++.+ ..++++... .... .....+++|.|++.|... .++++.++.+.+
T Consensus 5 ~~vLiV~g~~~~~~a~~l~~aL~~~g-~~V~~i~~~-~~~~--------~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~ 74 (259)
T 3rht_A 5 TRVLYCGDTSLETAAGYLAGLMTSWQ-WEFDYIPSH-VGLD--------VGELLAKQDLVILSDYPAERMTAQAIDQLVT 74 (259)
T ss_dssp -CEEEEESSCTTTTHHHHHHHHHHTT-CCCEEECTT-SCBC--------SSHHHHTCSEEEEESCCGGGBCHHHHHHHHH
T ss_pred ceEEEECCCCchhHHHHHHHHHHhCC-ceEEEeccc-cccc--------ChhHHhcCCEEEEcCCccccCCHHHHHHHHH
Confidence 36777765544444454544434333 344433322 2210 112457999999998775 468888888887
Q ss_pred hhCCCeeEEE
Q psy11373 179 HLKPGVGLVH 188 (539)
Q Consensus 179 ~~~~~vg~V~ 188 (539)
+...+-|++.
T Consensus 75 yV~~GGgLi~ 84 (259)
T 3rht_A 75 MVKAGCGLVM 84 (259)
T ss_dssp HHHTTCEEEE
T ss_pred HHHhCCeEEE
Confidence 7744555543
Done!