Query psy11382
Match_columns 328
No_of_seqs 199 out of 568
Neff 5.1
Searched_HMMs 29240
Date Fri Aug 16 16:59:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11382.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11382hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yf0_A Myotubularin-related pr 100.0 1.5E-89 5.2E-94 694.5 11.9 288 1-321 14-506 (512)
2 1zsq_A Myotubularin-related pr 100.0 9.6E-84 3.3E-88 654.5 19.0 280 8-323 29-520 (528)
3 1lw3_A Myotubularin-related pr 100.0 1.1E-82 3.8E-87 657.4 18.1 279 8-322 101-591 (657)
4 2hth_B Vacuolar protein sortin 96.6 0.014 4.7E-07 49.7 10.2 77 8-85 35-127 (140)
5 2cay_A VPS36 PH domain, vacuol 95.1 0.11 3.6E-06 44.5 9.2 77 8-85 48-131 (145)
6 3hsa_A Pleckstrin homology dom 93.8 0.23 7.9E-06 41.7 8.1 76 10-85 40-123 (126)
7 3b77_A Uncharacterized protein 86.2 1.8 6.3E-05 38.7 7.2 78 10-88 36-124 (193)
8 1zyi_A Methylosome subunit pic 83.1 6.1 0.00021 34.6 9.1 77 11-88 42-142 (171)
9 1pfj_A TFIIH basal transcripti 81.4 12 0.0004 30.5 9.5 77 9-85 18-99 (108)
10 1wgq_A FYVE, rhogef and PH dom 71.9 25 0.00084 26.5 8.7 78 11-88 25-104 (109)
11 1y5o_A TFB1, RNA polymerase II 71.6 32 0.0011 28.3 9.6 78 8-85 9-107 (115)
12 1w7p_D VPS36P, YLR417W; ESCRT- 69.7 0.94 3.2E-05 46.6 0.0 54 8-61 40-96 (566)
13 1t77_A Lipopolysaccharide-resp 68.1 5.3 0.00018 39.6 5.0 78 5-82 12-105 (414)
14 1pls_A Pleckstrin homology dom 60.9 44 0.0015 25.1 8.2 78 11-88 22-102 (113)
15 2d9y_A Pleckstrin homology dom 58.9 39 0.0013 25.3 7.6 77 11-88 29-110 (117)
16 2lyd_A Decapping protein 1; DC 58.7 44 0.0015 27.8 8.3 35 52-86 97-131 (134)
17 2yry_A Pleckstrin homology dom 56.6 37 0.0013 25.8 7.1 74 14-87 43-120 (122)
18 1upq_A PEPP1; PH domain, phosp 53.4 39 0.0013 25.7 6.8 76 12-88 30-110 (123)
19 2dkp_A Pleckstrin homology dom 50.6 21 0.00073 27.5 4.8 74 14-88 42-120 (128)
20 2qkl_A DCP1 protein, SPBC3B9.2 47.7 79 0.0027 26.0 8.0 35 52-86 91-125 (127)
21 2dn6_A KIAA0640 protein; PH do 47.5 84 0.0029 23.3 8.4 73 14-87 28-103 (115)
22 1fao_A Dual adaptor of phospho 44.2 1E+02 0.0035 23.4 8.6 74 13-87 37-112 (126)
23 2cof_A Protein KIAA1914; PH do 43.7 93 0.0032 23.2 7.5 74 15-88 27-102 (107)
24 2i5f_A Pleckstrin; PH domain, 42.6 93 0.0032 22.8 7.3 72 15-86 28-108 (109)
25 2gcl_A Hypothetical 63.0 kDa p 37.4 1.2E+02 0.004 28.0 8.3 72 8-83 171-249 (261)
26 2lul_A Tyrosine-protein kinase 37.2 1.7E+02 0.0059 24.0 8.8 77 11-88 37-122 (164)
27 1u5d_A SKAP55, SRC kinase-asso 36.2 1.2E+02 0.0042 21.9 7.0 75 11-85 24-103 (108)
28 3fss_A Histone chaperone RTT10 34.1 1.4E+02 0.0047 27.4 8.0 64 7-72 161-225 (237)
29 1btk_A Bruton'S tyrosine kinas 31.3 1.2E+02 0.004 25.3 6.8 78 10-88 24-133 (169)
30 1v89_A Hypothetical protein KI 29.7 1.4E+02 0.0049 22.0 6.5 76 13-88 27-113 (118)
31 2cod_A Centaurin-delta 1; ARF 26.5 2E+02 0.0068 21.4 7.1 73 9-86 24-98 (115)
32 1u5f_A SRC-associated adaptor 26.4 2.4E+02 0.0081 22.2 8.2 78 10-88 37-120 (148)
33 2kup_A Fibroblast growth facto 25.5 2.4E+02 0.0083 23.9 7.6 66 10-88 33-107 (146)
34 3aj4_A Pleckstrin homology dom 25.4 1.7E+02 0.0058 21.6 6.2 34 52-85 76-109 (112)
35 3f5r_A FACT complex subunit PO 23.9 3.7E+02 0.013 23.6 8.9 63 9-72 34-105 (191)
36 1x05_A Pleckstrin; PH domain, 23.8 1.7E+02 0.0057 22.3 6.0 38 51-88 84-121 (129)
37 1btn_A Beta-spectrin; signal t 22.7 2.2E+02 0.0075 20.5 6.4 76 8-84 21-105 (106)
38 2cy5_A Epidermal growth factor 21.6 3.6E+02 0.012 22.5 9.4 76 10-85 48-129 (140)
39 2rsg_A Collagen type IV alpha- 21.1 1.9E+02 0.0066 20.7 5.6 68 14-85 21-92 (94)
40 1eaz_A Tandem PH domain contai 20.6 2.2E+02 0.0074 21.3 6.0 76 11-87 31-111 (125)
41 1x1g_A Pleckstrin 2; PH domain 20.2 2.4E+02 0.0082 21.3 6.2 36 52-87 89-124 (129)
No 1
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-89 Score=694.54 Aligned_cols=288 Identities=48% Similarity=0.957 Sum_probs=263.4
Q ss_pred CCccCC-CCCceeEEEEEeCceEEEEcCCCCeeEEEecCccceEEeCCCCCCCCcEEEEeccccEEEEEeCCCcchHHHH
Q psy11382 1 MLNRAD-LRKPFVGTLHLTTTALIFQDTDCKKETWILLMHIASIERGPLSTLGSPLIIRCKTFLSVTFVIPRERECYDIY 79 (328)
Q Consensus 1 ~~~~~~-~~~~~~GtL~lT~~hLiF~~~~~~~e~wi~~~~I~~vek~~~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~ 79 (328)
|++|.+ .++++.|||+||||||||.+ +.++|+||+|++|++|||.+.++.|++|.|+|||||+++|.|+++++|.+||
T Consensus 14 l~~~~~~~~~~~~GtL~lTn~~LiF~~-~~~~e~wi~~~~I~~VeK~~~~~~~~~l~I~CKDfr~~~f~f~~~~~~~~v~ 92 (512)
T 2yf0_A 14 LLDRFSTSNKSLTGTLYLTATHLLFID-SHQKETWILHHHIASVEKLALTTSGCPLVIQCKNFRTVHFIVPRERDCHDIY 92 (512)
T ss_dssp CC--------CCEEEEEECSSEEEEEE-SSSCEEEEEGGGEEEEEECCCBTTBEEEEEEETTSCEEEEEESCHHHHHHHH
T ss_pred EEeccCCCCCceeEEEEEECCEEEEeC-CCCCceEecccceeEEEEecCCCCCceEEEEecCCcEEEEEeCChHHHHHHH
Confidence 456765 68899999999999999998 5568999999999999999887788999999999999999999999999999
Q ss_pred HHHHHhcCCCcccccccCCCCCCCCCCcCCccCCCccccccCCceecccccccCCCCC-CCCCCCcccCHHHHHHhcCCC
Q psy11382 80 VTLQKLSRPEPKKLRRRREPYPEPPVCKSSVIPTRPQRLLKIHIEELYCFTYTSTTES-PKSYGWDFFSLEQEFKRMQVP 158 (328)
Q Consensus 80 ~~l~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lyaF~~~~~~~~-~~~dGW~~fd~~~Ef~R~Gv~ 158 (328)
++|+++++| .++++||||.|+|.... ...+||++||++.||+|||++
T Consensus 93 ~sL~~~~~p--------------------------------~~~~~lfaF~y~~~~~~~~~~~gw~~yd~~~E~~R~g~~ 140 (512)
T 2yf0_A 93 NSLLQLSKQ--------------------------------AKYEDLYAFSYNPKQNDSERLQGWQLIDLAEEYKRMGVP 140 (512)
T ss_dssp HHHHHHSCC--------------------------------CCSTTSGGGTCCCSCCSHHHHHHHTTCCHHHHHHHTTCS
T ss_pred HHHHhhcCC--------------------------------CCcceeEEEeccccccccccCCCccccCHHHHHHHcCCC
Confidence 999999999 78899999999998652 236899999999999999999
Q ss_pred CCCeEEeeccccccccccc-------------------------c-----------------------------------
Q psy11382 159 NDEWCLTNLNKNYELVDIL-------------------------R----------------------------------- 178 (328)
Q Consensus 159 ~d~WRiS~iN~~Y~lC~TY-------------------------R----------------------------------- 178 (328)
++.||||++|++|++|+|| |
T Consensus 141 ~~~WRis~~N~~y~~c~tYP~~lvVP~~i~D~~l~~~a~fRs~~R~Pvl~w~h~~~~a~l~RssQP~~G~~~r~~eDE~l 220 (512)
T 2yf0_A 141 NSHWQLSDANRDYKICETYPRELYVPRIASKPIIVGSSKFRSKGRFPVLSYYHQDKEAAICRCSQPLSGFSARCLEDEHL 220 (512)
T ss_dssp SSSEEEEGGGTTSCSCSSSCSSEEEESSSCHHHHHHHHHHBGGGCCCEEEEECTTTCCEEEECCCBCCCSSCCCHHHHHH
T ss_pred cccEEEehhhcCCCccccCCceEEEeCcCCHHHHHHHHHHhhcCCceEEEEEcCCCCeEEEecCCcCcCcccCCHHHHHH
Confidence 9999999999999999997 0
Q ss_pred --------------------------------------------------------------------------------
Q psy11382 179 -------------------------------------------------------------------------------- 178 (328)
Q Consensus 179 -------------------------------------------------------------------------------- 178 (328)
T Consensus 221 l~~i~~~~~~~~~~~i~D~rp~~~a~an~a~G~G~E~~~~Y~~~~~~f~~i~nIh~~r~S~~kL~~~~~~~~~~~~~~ls 300 (512)
T 2yf0_A 221 LQAISKANPVNRYMYVMDTRPKLNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVNGTKGLSVNDFYS 300 (512)
T ss_dssp HHHHHHHCSSCCCEEEEECCSSCCC----CCCCSCCCTTTSTTEEEEECCCCCHHHHHHHHHHHHHHHSCCSCCHHHHHH
T ss_pred HHHHHHhCCCCCceEEEecCchhhHHHHHhcCCCcccccccCCceeEecChhhHHHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence
Q ss_pred -------------------------------------------------------------Cc-ceEEeeeeeccccccc
Q psy11382 179 -------------------------------------------------------------GG-TSLIEKDWLSFGHKFT 196 (328)
Q Consensus 179 -------------------------------------------------------------~G-~~LIEKEWl~fGH~F~ 196 (328)
+| ++|||||||+|||||.
T Consensus 301 ~Le~s~WL~~i~~iL~~a~~ia~~v~~~g~sVLVhcsDGwDrT~ql~SLaqllLDPyyRTi~GF~~LIEKEWlsfGH~F~ 380 (512)
T 2yf0_A 301 GLESSGWLRHIKAVMDAAVFLAKAITVENASVLVHCSDGWDRTSQVCSLGSLLLDSYYRTIKGFMVLIEKDWISFGHKFS 380 (512)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHTTCCCEEECTTTSSSHHHHHHHHHHHHHCSGGGSHHHHHHHHHHHTTTTTCCHH
T ss_pred HHHhCccHHHHHHHHHHHHHHHHHHHhCCCeEEEECCCCccccHHHHHHHHHHhCccccHHHHHHHHHhhHHhhcCCchh
Confidence 34 9999999999999999
Q ss_pred cccCCCCCCCCCCCcchhhhhhhHHHHHHhCCCCcccCHHHHHHHHHHhccCCccccccCcHHHHhhhhccCCcccchhh
Q psy11382 197 DRCGHLAGDPREVSPVFVQFLECSWQLSVQFPQAFEFNEIFLLTLQDHVTSCQFGTFVGNCEKDRLDLRLSENTYSLWGY 276 (328)
Q Consensus 197 ~R~gh~~~~~~e~SPvFlqFLDcV~Ql~~QfP~aFEFne~fL~~L~dh~ys~~fGTFL~Nse~eR~~~~~~~~T~SlW~~ 276 (328)
+||||..++++|.||||+|||||||||++|||++|||||.||++|+||+|||+|||||||||+||.+.++.++|.|||+|
T Consensus 381 ~R~gh~~~~~~e~SPvFlqFLDcV~Ql~~QfP~~FEFne~~L~~L~dh~ys~~fgTFL~nse~eR~~~~~~~~t~SlW~~ 460 (512)
T 2yf0_A 381 ERCGQLDGDPKEVSPVFTQFLECVWHLTEQFPQAFEFSEAFLLQIHEHIHSCQFGNFLGNCQKEREELKLKEKTYSLWPF 460 (512)
T ss_dssp HHHTSSSCCGGGCCCHHHHHHHHHHHHHHHCTTTCSBCHHHHHHHHHHHTTTCSTTSCSSSHHHHHHTTHHHHSCCSHHH
T ss_pred hhcCCCCCCcCCCCCchHHHHHHHHHHHhhCCCccccCHHHHHHHHHHhccCccCccccCCHHHHHHhCCCcCCccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccCCCCCCCC-CCCceeccCCCCCeeecCCCccccchhH
Q psy11382 277 MANRMEDYINPLYSPDA-HPDFIRPDLSPQNIRYTPFLTVEKNYDK 321 (328)
Q Consensus 277 ~~~~~~~f~Np~Y~~~~-~~~vl~P~~~~~~l~lW~~~Y~R~~~~~ 321 (328)
++++...|+||+|+|.. ..++|+|+++++++++|.++|+||+..+
T Consensus 461 ~~~~~~~f~Np~Y~~~~~~~~vl~P~~~~~~l~lW~~~y~r~~~~~ 506 (512)
T 2yf0_A 461 LLEDQKKYLNPLYSSESHRFTVLEPNTVSFNFKFWRNMYHQFDRTA 506 (512)
T ss_dssp HTTSHHHHBCTTCCCC---CCCCCCCCSSSSCCCCHHHHHHHCCC-
T ss_pred HHhcHHhhcCcCcCCCCCCCCeeecccCCCcCeechhhhCCCCCCc
Confidence 99999999999999962 3589999999999999999999999765
No 2
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=100.00 E-value=9.6e-84 Score=654.47 Aligned_cols=280 Identities=35% Similarity=0.603 Sum_probs=253.4
Q ss_pred CCceeEEEEEeCceEEEEcCCC--CeeEEEecCccceEEeCCC-CCC---CCcEEEEeccccEEEEEeCCC-cchHHHHH
Q psy11382 8 RKPFVGTLHLTTTALIFQDTDC--KKETWILLMHIASIERGPL-STL---GSPLIIRCKTFLSVTFVIPRE-RECYDIYV 80 (328)
Q Consensus 8 ~~~~~GtL~lT~~hLiF~~~~~--~~e~wi~~~~I~~vek~~~-s~~---g~~L~i~CKdfr~~~f~~~~~-~~~~~v~~ 80 (328)
.+++.|||+||||||||.+.+. ..++|||+.+|++|||.++ ++. .+.|+|+|||||+++|.|+++ .+|.+||+
T Consensus 29 ~~~~~GtL~lTn~rLiF~~~~~~~~~~~~iPL~~I~~vek~~~~s~~~~~~~~l~I~CKDfr~~~f~f~~~~~~~~~v~~ 108 (528)
T 1zsq_A 29 TGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCKDIRNLRFAHKPEGRTRRSIFE 108 (528)
T ss_dssp TEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEETTTEEEEEECCGGGCCHHHHHH
T ss_pred CCceeEEEEEECCEEEEEccCCCccEEEEeeccceEEEEEcCCCCcCCCCCceEEEEccCCeEEEEEecCchHHHHHHHH
Confidence 3579999999999999998543 4579999999999999864 232 357999999999999999987 56999999
Q ss_pred HHHHhcCCCcccccccCCCCCCCCCCcCCccCCCccccccCCc-eecccccccCCCCCCCCCCCcccCHHHHHHhcCCCC
Q psy11382 81 TLQKLSRPEPKKLRRRREPYPEPPVCKSSVIPTRPQRLLKIHI-EELYCFTYTSTTESPKSYGWDFFSLEQEFKRMQVPN 159 (328)
Q Consensus 81 ~l~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lyaF~~~~~~~~~~~dGW~~fd~~~Ef~R~Gv~~ 159 (328)
+|+++++| .+. .+||||.|+|... ++||++|+++.||+|||+++
T Consensus 109 ~L~~~~~p--------------------------------~~~~~~lfaF~y~~~~~---~~gw~~y~~~~E~~R~g~~~ 153 (528)
T 1zsq_A 109 NLMKYAFP--------------------------------VSNNLPLFAFEYKEVFP---ENGWKLYDPLLEYRRQGIPN 153 (528)
T ss_dssp HHHHHSCT--------------------------------TTTTCCCGGGTCCCCCS---SCGGGSCCHHHHHHHTTCSC
T ss_pred HHHHHhcC--------------------------------Cccccceeeeecccccc---CCCceecCHHHHHHHcCCCc
Confidence 99999999 444 4699999999874 69999999999999999999
Q ss_pred CCeEEeeccccccccccc-------------------------c------------------------------------
Q psy11382 160 DEWCLTNLNKNYELVDIL-------------------------R------------------------------------ 178 (328)
Q Consensus 160 d~WRiS~iN~~Y~lC~TY-------------------------R------------------------------------ 178 (328)
+.||||++|++|++|+|| |
T Consensus 154 ~~WRis~vN~~y~~c~tYP~~lvVP~~i~D~~l~~~a~frs~~R~Pvl~w~h~~~~a~l~RssqP~~g~~~~r~~~DE~~ 233 (528)
T 1zsq_A 154 ESWRITKINERYELCDTYPALLVVPANIPDEELKRVASFRSRGRIPVLSWIHPESQATITRCSQPMVGVSGKRSKEDEKY 233 (528)
T ss_dssp SSEEEECTTTTSSSCTTSCSSEEEETTCCHHHHHHHHHHBGGGCCCEEEEECTTTCCEEEEECCBCCTTTTCCCHHHHHH
T ss_pred ccEEEEEecCCCCccCCCCCeEEEeCcCCHHHHHHHHHHhhcCCceEEEEEcCCCCcEEEEcCCcCcccccCCCHHHHHH
Confidence 999999999999999997 0
Q ss_pred --------------------------------------------------------------------------------
Q psy11382 179 -------------------------------------------------------------------------------- 178 (328)
Q Consensus 179 -------------------------------------------------------------------------------- 178 (328)
T Consensus 234 l~~i~~~~~~~~~~~i~D~rp~~~A~an~a~G~G~E~~~~Y~~~~~~f~~i~nIh~~r~S~~kL~~~~~~~~~~~~wls~ 313 (528)
T 1zsq_A 234 LQAIMDSNAQSHKIFIFDARPSVNAVANKAKGGGYESEDAYQNAELVFLDIHNIHVMRESLRKLKEIVYPNIEETHWLSN 313 (528)
T ss_dssp HHHHHHHSSSCSSEEEEECSCHHHHHHHHHHTCCCCCTTTCTTEEEEECCCCCHHHHHHHHHHHHHHHSSCCCGGGHHHH
T ss_pred HHHHHHhCcccCccEEEccCchhhHHHhhhcCCcccCcccccCceEEEcCCccHHHHHHHHHHHHHHhCCCCcchhHHHH
Confidence
Q ss_pred ------------------------------------------------------------Cc-ceEEeeeeecccccccc
Q psy11382 179 ------------------------------------------------------------GG-TSLIEKDWLSFGHKFTD 197 (328)
Q Consensus 179 ------------------------------------------------------------~G-~~LIEKEWl~fGH~F~~ 197 (328)
+| ++|||||||+|||||.+
T Consensus 314 Le~s~WL~~i~~iL~~a~~ia~~l~~~~~sVLvhcsdGwDrT~ql~SLaqllLDPyyRTi~GF~~LIEKEWlsfGH~F~~ 393 (528)
T 1zsq_A 314 LESTHWLEHIKLILAGALRIADKVESGKTSVVVHSSDGWDRTAQLTSLAMLMLDGYYRTIRGFEVLVEKEWLSFGHRFQL 393 (528)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECSSSSSHHHHHHHHHHHHHCGGGGSHHHHHHHHHHHTTTTTCCHHH
T ss_pred hHhcccHHHHHHHHHHHHHHHHHHHcCCceEEEECCCCccchHHHHHHHHHHcCccccHHHHHHHHHHhHHhhcCCChhh
Confidence 33 99999999999999999
Q ss_pred ccCCCCC--CCCCCCcchhhhhhhHHHHHHhCCCCcccCHHHHHHHHHHhccCCccccccCcHHHHhhhhccCCcccchh
Q psy11382 198 RCGHLAG--DPREVSPVFVQFLECSWQLSVQFPQAFEFNEIFLLTLQDHVTSCQFGTFVGNCEKDRLDLRLSENTYSLWG 275 (328)
Q Consensus 198 R~gh~~~--~~~e~SPvFlqFLDcV~Ql~~QfP~aFEFne~fL~~L~dh~ys~~fGTFL~Nse~eR~~~~~~~~T~SlW~ 275 (328)
||||+.. .++|.||||+|||||||||++|||++|||||.||++|+||+|||+|||||||||+||.+.++.++|.|||+
T Consensus 394 R~gh~~~~~~~~e~SPvFlqFLDcV~Ql~~QfP~~FEFne~~L~~L~~h~ys~~fgTFL~nse~eR~~~~~~~~t~SlW~ 473 (528)
T 1zsq_A 394 RVGHGDKNHADADRSPVFLQFIDCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFGTFLCNSEQQRGKENLPKRTVSLWS 473 (528)
T ss_dssp HHTTTCCCTTCTTCCCHHHHHHHHHHHHHHHCTTTCSBCHHHHHHHHHHHHHCSSSTTCSSSHHHHHHTTHHHHSCCHHH
T ss_pred hcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhCCCccccCHHHHHHHHHHhcccccCCccccHHHHHHHhccCCCCcChHh
Confidence 9999864 46899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccccCCCCCCCCCCCceeccCCCCCeeecCCCccccchhHHh
Q psy11382 276 YMANRMEDYINPLYSPDAHPDFIRPDLSPQNIRYTPFLTVEKNYDKLQ 323 (328)
Q Consensus 276 ~~~~~~~~f~Np~Y~~~~~~~vl~P~~~~~~l~lW~~~Y~R~~~~~~~ 323 (328)
|++++.+.|+||+|+|.. ..+|+|+++++++++|.+||+||+.+.-.
T Consensus 474 ~~~~~~~~f~Np~Y~~~~-~~vl~P~~~~~~l~lW~~~y~r~~~~~~~ 520 (528)
T 1zsq_A 474 YINSQLEDFTNPLYGSYS-NHVLYPVASMRHLELWVGYYIRWNPRAAA 520 (528)
T ss_dssp HHHTCGGGGBCTTTTSCS-SSCCCCCCSTTTCCCCHHHHTCSCC----
T ss_pred hHhhCHHhhcCCCcCCCC-CcccCCccccCCCeehHHhhCCCCCCCCc
Confidence 999999999999999975 68999999999999999999999987543
No 3
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=100.00 E-value=1.1e-82 Score=657.42 Aligned_cols=279 Identities=35% Similarity=0.603 Sum_probs=254.0
Q ss_pred CCceeEEEEEeCceEEEEcCCC--CeeEEEecCccceEEeCCC-CCC---CCcEEEEeccccEEEEEeCCC-cchHHHHH
Q psy11382 8 RKPFVGTLHLTTTALIFQDTDC--KKETWILLMHIASIERGPL-STL---GSPLIIRCKTFLSVTFVIPRE-RECYDIYV 80 (328)
Q Consensus 8 ~~~~~GtL~lT~~hLiF~~~~~--~~e~wi~~~~I~~vek~~~-s~~---g~~L~i~CKdfr~~~f~~~~~-~~~~~v~~ 80 (328)
++++.|||+||||||||.+.+. ..++||||.+|++|||.++ ++. .+.|+|+|||||+++|.|+++ .+|.+||+
T Consensus 101 ~~~~~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Iekv~g~s~~g~~~~~l~I~CKDfR~~~f~f~~~~~~~~~v~~ 180 (657)
T 1lw3_A 101 TGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVCKDIRNLRFAHKPEGRTRRSIFE 180 (657)
T ss_dssp TEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEETTTEEEEEECCGGGCCHHHHHH
T ss_pred CCceeEEEEEECCEEEEEecCCCcceEEEecccceEEEEecCCCcccCCCCceEEEEecCCcEEEEEeCCccchHHHHHH
Confidence 3579999999999999998543 4579999999999999763 233 357999999999999999987 56999999
Q ss_pred HHHHhcCCCcccccccCCCCCCCCCCcCCccCCCccccccCCc-eecccccccCCCCCCCCCCCcccCHHHHHHhcCCCC
Q psy11382 81 TLQKLSRPEPKKLRRRREPYPEPPVCKSSVIPTRPQRLLKIHI-EELYCFTYTSTTESPKSYGWDFFSLEQEFKRMQVPN 159 (328)
Q Consensus 81 ~l~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lyaF~~~~~~~~~~~dGW~~fd~~~Ef~R~Gv~~ 159 (328)
+|.++++| .+. ..||||.|+|... ++||++|+++.||+|||+++
T Consensus 181 ~L~~~~~P--------------------------------~~~~~~lfAF~y~~~~~---~~Gw~~yd~~~E~~R~g~~~ 225 (657)
T 1lw3_A 181 NLMKYAFP--------------------------------VSNNLPLFAFEYKEVFP---ENGWKLYDPLLEYRRQGIPN 225 (657)
T ss_dssp HHHHHHSS--------------------------------GGGTCCCGGGTCCCCCS---SCGGGSCCHHHHHHHHTCSC
T ss_pred HHHHHhCC--------------------------------Ccccccceeeccccccc---CCCceecCHHHHHHHhCCCc
Confidence 99999999 444 4699999999874 69999999999999999999
Q ss_pred CCeEEeeccccccccccc-------------------------c------------------------------------
Q psy11382 160 DEWCLTNLNKNYELVDIL-------------------------R------------------------------------ 178 (328)
Q Consensus 160 d~WRiS~iN~~Y~lC~TY-------------------------R------------------------------------ 178 (328)
+.||||++|++|++|+|| |
T Consensus 226 ~~WRis~vN~~y~~C~TYP~~lvVP~~isD~~L~~~a~fRs~~R~Pvlsw~h~~~~a~l~RsSQPl~G~~~~r~~eDE~l 305 (657)
T 1lw3_A 226 ESWRITKINERYELCDTYPALLVVPANIPDEELKRVASFRSRGRIPVLSWIHPESQATITRCSQPMVGVSGKRSKEDEKY 305 (657)
T ss_dssp SSEEEECTTTTSCSCTTSCSCEEEETTCCHHHHHHHHHHBGGGCCCEEEEECTTTCCEEEEECCBCCTTTTCCCHHHHHH
T ss_pred ccEEEEeecCCCCccCCCCCeEEEeCcCCHHHHHHHHHHhhcCCceEEEEEcCCCCcEEEEcCCcCcccccCCCHHHHHH
Confidence 999999999999999997 0
Q ss_pred --------------------------------------------------------------------------------
Q psy11382 179 -------------------------------------------------------------------------------- 178 (328)
Q Consensus 179 -------------------------------------------------------------------------------- 178 (328)
T Consensus 306 l~ai~~a~~~~~~l~I~DaRp~~nA~an~a~G~G~E~~~~Y~~~~~~fl~I~nIh~mr~S~~KL~~~c~p~~~~~~wls~ 385 (657)
T 1lw3_A 306 LQAIMDSNAQSHKIFIFDARPSVNAVANKAKGGGYESEDAYQNAELVFLDIHNIHVMRESLRKLKEIVYPNIEETHWLSN 385 (657)
T ss_dssp HHHHHTTCTTCCCEEEEECSCHHHHHHHHTTTCCCCCTTTCTTEEEEECCCCCHHHHHHHHHHHHHHHSSCCCGGGHHHH
T ss_pred HHHHHHhCcccCccEEEccCchhHHHHHhhcCCcccCcccccCceEEECCCccHHHHHHHHHHHHHHhCCCCcchhHHHH
Confidence
Q ss_pred ------------------------------------------------------------Cc-ceEEeeeeecccccccc
Q psy11382 179 ------------------------------------------------------------GG-TSLIEKDWLSFGHKFTD 197 (328)
Q Consensus 179 ------------------------------------------------------------~G-~~LIEKEWl~fGH~F~~ 197 (328)
+| ++|||||||+|||||.+
T Consensus 386 Le~S~WL~hI~~iL~~A~~ia~~l~~~~~sVLVhcsDGwDrT~qlsSLaQLlLDPyYRTi~GF~vLIEKEWlsfGH~F~~ 465 (657)
T 1lw3_A 386 LESTHWLEHIKLILAGALRIADKVESGKTSVVVHSSDGWDRTAQLTSLAMLMLDGYYRTIRGFEVLVEKEWLSFGHRFQL 465 (657)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECSSSSSHHHHHHHHHHHHHCGGGGSHHHHHHHHHHHTTTTTCCHHH
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHcCCceEEEECCCCccchHHHHHHHHHHhCccccHHHHHHHHHHHHHHhcCCChhh
Confidence 33 99999999999999999
Q ss_pred ccCCCCC--CCCCCCcchhhhhhhHHHHHHhCCCCcccCHHHHHHHHHHhccCCccccccCcHHHHhhhhccCCcccchh
Q psy11382 198 RCGHLAG--DPREVSPVFVQFLECSWQLSVQFPQAFEFNEIFLLTLQDHVTSCQFGTFVGNCEKDRLDLRLSENTYSLWG 275 (328)
Q Consensus 198 R~gh~~~--~~~e~SPvFlqFLDcV~Ql~~QfP~aFEFne~fL~~L~dh~ys~~fGTFL~Nse~eR~~~~~~~~T~SlW~ 275 (328)
||||+.. .++|.||||+|||||||||++|||++|||||.||++|+||+|||+|||||||||+||.+.++.++|.|||+
T Consensus 466 R~gh~~~~~~~~e~SPvFlqFLDCV~QL~~QfP~aFEFne~fL~~L~dh~yS~~FGTFL~Nse~ER~~~~v~~~T~SlWs 545 (657)
T 1lw3_A 466 RVGHGDKNHADADRSPVFLQFIDCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFGTFLCNSEQQRGKENLPKRTVSLWS 545 (657)
T ss_dssp HHTTTCCCTTCTTCCCHHHHHHHHHHHHHHHCTTTCSBCHHHHHHHHHHHHHCSSSTTCSSSHHHHHHTTHHHHSCCHHH
T ss_pred hcCCCCCCCCcCCCCCCHHHHHHHHHHHHHhCCCccccCHHHHHHHHHHhhhcccCCccccHHHHHHHhccCCCCccHHH
Confidence 9999865 46899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccccCCCCCCCCCCCceeccCCCCCeeecCCCccccchhHH
Q psy11382 276 YMANRMEDYINPLYSPDAHPDFIRPDLSPQNIRYTPFLTVEKNYDKL 322 (328)
Q Consensus 276 ~~~~~~~~f~Np~Y~~~~~~~vl~P~~~~~~l~lW~~~Y~R~~~~~~ 322 (328)
|++++...|+||+|+|.. ..+|+|++++.++++|.+||+||++..-
T Consensus 546 ~i~~~~~~f~NplY~~~~-~~vl~P~~~~~~l~lW~~~y~R~~~~~~ 591 (657)
T 1lw3_A 546 YINSQLEDFTNPLYGSYS-NHVLYPVASMRHLELWVGYYIRWNPRMK 591 (657)
T ss_dssp HHTTCTTTTBCTTTTCCC-CCCCCCCCSTTTCCCCHHHHTCCSCC--
T ss_pred HHhhChHhhcCCCcCCCC-CceeccccccCCCEehHHHhCCCCCCCC
Confidence 999999999999999975 6899999999999999999999998654
No 4
>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A
Probab=96.62 E-value=0.014 Score=49.70 Aligned_cols=77 Identities=22% Similarity=0.231 Sum_probs=54.6
Q ss_pred CCceeEEEEEeCceEEEEcC-CCCeeEEEecCccceEEeCCCC-CCCCcEEEEecc--------------ccEEEEEeCC
Q psy11382 8 RKPFVGTLHLTTTALIFQDT-DCKKETWILLMHIASIERGPLS-TLGSPLIIRCKT--------------FLSVTFVIPR 71 (328)
Q Consensus 8 ~~~~~GtL~lT~~hLiF~~~-~~~~e~wi~~~~I~~vek~~~s-~~g~~L~i~CKd--------------fr~~~f~~~~ 71 (328)
.+...|+|+||+|||||.+. +....+=||+..|.++|..... .....|+++-+- .-.++|.|..
T Consensus 35 ~~~k~G~l~LTshRli~~d~~~~~~s~~lpl~~v~~~e~~~~~f~~s~Ki~l~l~~~~~~~~~gp~~~s~~~~~kLsFr~ 114 (140)
T 2hth_B 35 IKFDAGTLLLSTHRLIWRDQKNHECCMAILLSQIVFIEEQAAGIGKSAKIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKE 114 (140)
T ss_dssp SCCCCEEEEEESSEEEEEETTCCSCCEEEEGGGEEEEEEECCTTSSCCEEEEEECCCCCCSSSCCCSTTSCCEEEEEETT
T ss_pred CCCcCCEEEEecCEEEEecCCCCceEEEEEhHHeeeeeeeccccccCceEEEEecCCCccCCCCCcccccCcEEEEEEcC
Confidence 45689999999999999874 3345689999999999975422 122345566552 5678999986
Q ss_pred CcchHHHHHHHHHh
Q psy11382 72 ERECYDIYVTLQKL 85 (328)
Q Consensus 72 ~~~~~~v~~~l~~l 85 (328)
.. +.+.+..|.+.
T Consensus 115 Gg-~~eF~~~L~~a 127 (140)
T 2hth_B 115 HG-QIEFYRRLSEE 127 (140)
T ss_dssp SC-HHHHHHHHHHH
T ss_pred CC-ChHHHHHHHHH
Confidence 54 36666666554
No 5
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=95.10 E-value=0.11 Score=44.50 Aligned_cols=77 Identities=16% Similarity=0.089 Sum_probs=52.8
Q ss_pred CCceeEEEEEeCceEEEEcCCCC--eeEEEecCccceEEeCCCC-CCCCcEEEEecc----ccEEEEEeCCCcchHHHHH
Q psy11382 8 RKPFVGTLHLTTTALIFQDTDCK--KETWILLMHIASIERGPLS-TLGSPLIIRCKT----FLSVTFVIPRERECYDIYV 80 (328)
Q Consensus 8 ~~~~~GtL~lT~~hLiF~~~~~~--~e~wi~~~~I~~vek~~~s-~~g~~L~i~CKd----fr~~~f~~~~~~~~~~v~~ 80 (328)
.+...|+||||+|||||.+.... ..+=+|+..|..+|..... +...-++|..+- --.+++.|.... +.|.+.
T Consensus 48 ~~~k~G~lyLTshRIIyv~~~~~~~~SfslPL~~v~~~e~~~~~fg~s~Ki~l~~~p~~~~~~~~KLsFk~GG-a~eF~~ 126 (145)
T 2cay_A 48 LQRQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGFLTRSPRLILFFKDPSSSTEFVQLSFRKSD-GVLFSQ 126 (145)
T ss_dssp TTCSSEEEEEESSEEEEEESSCHHHHCEEEEGGGEEEEEEECSSSSSSCEEEEEESSCSSTTCCEEEEESSSC-CHHHHH
T ss_pred cCCCccEEEEEcCeEEEecCCCCcceEEEeEhHheeeeeEEcCccccCceEEEEecCCCCCceEEEEEEcCCC-chHHHH
Confidence 46789999999999999974322 4579999999999975321 122345556653 357788887654 366666
Q ss_pred HHHHh
Q psy11382 81 TLQKL 85 (328)
Q Consensus 81 ~l~~l 85 (328)
.|++.
T Consensus 127 ~l~~a 131 (145)
T 2cay_A 127 ATERA 131 (145)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 6
>3hsa_A Pleckstrin homology domain; YP_926556.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE MLY; 1.99A {Shewanella amazonensis SB2B} SCOP: b.55.1.13 PDB: 3dcx_A*
Probab=93.82 E-value=0.23 Score=41.72 Aligned_cols=76 Identities=14% Similarity=0.126 Sum_probs=57.4
Q ss_pred ceeEEEEEeCceEEEEc----CCCCee-EEEecCccceEEeCCCC--CCCCcEEEEeccccE-EEEEeCCCcchHHHHHH
Q psy11382 10 PFVGTLHLTTTALIFQD----TDCKKE-TWILLMHIASIERGPLS--TLGSPLIIRCKTFLS-VTFVIPRERECYDIYVT 81 (328)
Q Consensus 10 ~~~GtL~lT~~hLiF~~----~~~~~e-~wi~~~~I~~vek~~~s--~~g~~L~i~CKdfr~-~~f~~~~~~~~~~v~~~ 81 (328)
.+.+..+.||.+||+.+ +..+.| .-|||..|.++.--... ...+.|.|.-..-.. +.+.|.+..+.++++..
T Consensus 40 ~iRD~~iFTnkRLI~vD~QG~TGkK~~~~siPY~sI~~~siETAG~fDlDaElki~isg~~~pi~~~f~k~~di~~i~k~ 119 (126)
T 3hsa_A 40 MVRDLFVFTSXRLILIDXQGVTGXXVSYHSIPYXAIVHFQVETAGTFDMDAELXLWISGQHEPLVXELXRGTDVVGIQXT 119 (126)
T ss_dssp CSSEEEEEESSEEEEEEEESTTSCEEEEEEEEGGGEEEEEEEEESTTSCEEEEEEEETTCSSCEEEEECTTSCHHHHHHH
T ss_pred hcCceEEEccchheEEecCcCcccceEEEEeccceeeEEEEeccccccCCceEEEEEcCCceEEEEeccCcccHHHHHHH
Confidence 45689999999999997 233445 48999999988643211 123577777666555 89999999999999999
Q ss_pred HHHh
Q psy11382 82 LQKL 85 (328)
Q Consensus 82 l~~l 85 (328)
|.+.
T Consensus 120 La~~ 123 (126)
T 3hsa_A 120 IARY 123 (126)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9765
No 7
>3b77_A Uncharacterized protein; pleckstrin-homology domain, structural genomics, joint cente structural genomics, JCSG; 2.42A {Exiguobacterium sibiricum} SCOP: b.55.1.13
Probab=86.21 E-value=1.8 Score=38.68 Aligned_cols=78 Identities=13% Similarity=0.110 Sum_probs=55.5
Q ss_pred ceeEEEEEeCceEEEEcC----CCCee-EEEecC--ccceEEeCCCC--CCCCcEEEEeccccEEEEEeCC--CcchHHH
Q psy11382 10 PFVGTLHLTTTALIFQDT----DCKKE-TWILLM--HIASIERGPLS--TLGSPLIIRCKTFLSVTFVIPR--ERECYDI 78 (328)
Q Consensus 10 ~~~GtL~lT~~hLiF~~~----~~~~e-~wi~~~--~I~~vek~~~s--~~g~~L~i~CKdfr~~~f~~~~--~~~~~~v 78 (328)
.+.-.+++||.+||+.+. ..+.+ .=+||. .|..+.-.... ...+.|.|.-.. ..+.+.|++ ..+.+++
T Consensus 36 ~irD~~iFTNkRLI~vD~Qg~TGKK~~~~siPY~~~~I~~~siETAGtfDlDaElki~i~~-~~~~Ief~K~~~~di~~l 114 (193)
T 3b77_A 36 SKTDEYCFTNLALVHLDGESAVSSKRVLYRYPYAHYPIRHVMFETAGTVDLDVEIKFEIGG-KHYSIDVDKKQLEHVKDL 114 (193)
T ss_dssp CSSEEEEEESSEEEEEECCCC--CCCEEEEEETTTSCEEEEEEECCCSSCCEEEEEEEETT-EEEEEEEEGGGHHHHHHH
T ss_pred ecceEEEEecchhheeccccccceeEEEEEeccCCCceeEEEEEecceeccCccEEEEEcC-ceEEEEeCCcchhhHHHH
Confidence 345689999999999982 23444 368999 99988543211 223556666554 456789988 6789999
Q ss_pred HHHHHHhcCC
Q psy11382 79 YVTLQKLSRP 88 (328)
Q Consensus 79 ~~~l~~l~~p 88 (328)
|..|..+|.-
T Consensus 115 yk~L~~is~~ 124 (193)
T 3b77_A 115 YKALLAIAEK 124 (193)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 8
>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}
Probab=83.11 E-value=6.1 Score=34.56 Aligned_cols=77 Identities=13% Similarity=0.118 Sum_probs=49.3
Q ss_pred eeEEEEEeCceEEEEcCCCCeeEEEecCccc--eEEeCCCCCCCC--cEEEEecc--------------------ccEEE
Q psy11382 11 FVGTLHLTTTALIFQDTDCKKETWILLMHIA--SIERGPLSTLGS--PLIIRCKT--------------------FLSVT 66 (328)
Q Consensus 11 ~~GtL~lT~~hLiF~~~~~~~e~wi~~~~I~--~vek~~~s~~g~--~L~i~CKd--------------------fr~~~ 66 (328)
-.||||||+-+|+|.+. .++-+-|+|+.|+ .|.|.+..-... .+.|-.+. ..=++
T Consensus 42 g~GtLyVt~~~l~W~~~-~~~G~sI~YpsIsLHAIsrd~~~~p~~clY~Qld~~~~~~~~~~~~e~~~~Dde~~~~~Eir 120 (171)
T 1zyi_A 42 GTGTLYIAESRLSWLDG-SGLGFSLEYPTISLHAVSRDLNAYPREHLYVMVNAKFGEESKESVAEEEDSDDDVEPIAEFR 120 (171)
T ss_dssp CEEEEEEETTEEEEEET-TTEEEEESSCCCSEEECCSSCSSCCSCCEEEEEECCCCSSCSSSCCCSCCSSCCSCSEEEEE
T ss_pred CceEEEEEcCEEEEEcC-CCcEEEeecCeEEEEEEecCCCCCCCceEEEEEecccCccccccccccccccccccceeEEE
Confidence 47999999999999986 5667889998775 444443211111 23333321 22255
Q ss_pred EEeCCCcchHHHHHHHHHhcCC
Q psy11382 67 FVIPRERECYDIYVTLQKLSRP 88 (328)
Q Consensus 67 f~~~~~~~~~~v~~~l~~l~~p 88 (328)
|.-+.......||++|.+.+..
T Consensus 121 lvP~d~s~l~~if~Ams~Cq~L 142 (171)
T 1zyi_A 121 FVPSDKSALEAMFTAMCECQAL 142 (171)
T ss_dssp EEESCHHHHHHHHHHHHHHHHC
T ss_pred EeCCCccHHHHHHHHHHHHHHc
Confidence 5545556788999999887654
No 9
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=81.37 E-value=12 Score=30.53 Aligned_cols=77 Identities=17% Similarity=0.097 Sum_probs=52.2
Q ss_pred CceeEEEEEeCceEEEEcCCC-CeeEEEecCccceEEeCCCCCCCCcEEEEeccccEEEEEeCCCc----chHHHHHHHH
Q psy11382 9 KPFVGTLHLTTTALIFQDTDC-KKETWILLMHIASIERGPLSTLGSPLIIRCKTFLSVTFVIPRER----ECYDIYVTLQ 83 (328)
Q Consensus 9 ~~~~GtL~lT~~hLiF~~~~~-~~e~wi~~~~I~~vek~~~s~~g~~L~i~CKdfr~~~f~~~~~~----~~~~v~~~l~ 83 (328)
+...|||+|+.-|+.+..... ..-+-+++..|.....-|.+..--.|.|.-++=..++|.|.+.. |+..|=+.|+
T Consensus 18 KK~dGtL~l~~d~i~W~p~~~~~~~vs~~~~~I~~qq~SP~~k~KVqLqi~l~~~~~~~F~Ftn~~~a~~erd~VKd~L~ 97 (108)
T 1pfj_A 18 KKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQ 97 (108)
T ss_dssp SSCBCEEEEETTEEEEECSSSSSCSEEEETTTCCCEEECCSSSSSCEEEEECSSSCEEEEECCCSSCTTHHHHHHHHHHH
T ss_pred ecCCceEEEEcceEEEccCCCCCceEEEehhhhhcceeCCCCCccEEEEEEEeCCCceEEEEcCcHHHHHHHHHHHHHHH
Confidence 455699999999999997332 22244467777765544544444578888887788999998754 4455555555
Q ss_pred Hh
Q psy11382 84 KL 85 (328)
Q Consensus 84 ~l 85 (328)
++
T Consensus 98 ~~ 99 (108)
T 1pfj_A 98 QL 99 (108)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 10
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=71.87 E-value=25 Score=26.46 Aligned_cols=78 Identities=8% Similarity=-0.094 Sum_probs=55.5
Q ss_pred eeEEEEEeCceEEEEcC--CCCeeEEEecCccceEEeCCCCCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhcCC
Q psy11382 11 FVGTLHLTTTALIFQDT--DCKKETWILLMHIASIERGPLSTLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLSRP 88 (328)
Q Consensus 11 ~~GtL~lT~~hLiF~~~--~~~~e~wi~~~~I~~vek~~~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~~p 88 (328)
..=-..|++..|.+... +....--|++..+..++..........+.|.+.+-+.+.|.-+++.++.+....|++.+.+
T Consensus 25 k~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~~~ 104 (109)
T 1wgq_A 25 KHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTVS 104 (109)
T ss_dssp EEEEEEEETTEEEEESCTTCSSCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred eeEEEEEeCCEEEEECCCCcCccCceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 33445677888887752 2233456777776666544333334678888888888899999999999999999998776
No 11
>1y5o_A TFB1, RNA polymerase II transcription factor B 73 kDa subunit; TFIIH, PH domain, phosphoinositides, VP16; NMR {Saccharomyces cerevisiae} SCOP: b.55.1.9 PDB: 2gs0_A 2k2u_A 2l2i_A 2lox_A*
Probab=71.60 E-value=32 Score=28.27 Aligned_cols=78 Identities=21% Similarity=0.224 Sum_probs=60.4
Q ss_pred CCceeEEEEEeCc----eEEEEcCCCCeeEEEecCccceEEeCCCCCCCCcEEEEecc--------c---------cEEE
Q psy11382 8 RKPFVGTLHLTTT----ALIFQDTDCKKETWILLMHIASIERGPLSTLGSPLIIRCKT--------F---------LSVT 66 (328)
Q Consensus 8 ~~~~~GtL~lT~~----hLiF~~~~~~~e~wi~~~~I~~vek~~~s~~g~~L~i~CKd--------f---------r~~~ 66 (328)
-+...|+|.|++= -|.+...+..+-+-|++..|.....-+.++.--.|.|.-|. = -.+.
T Consensus 9 yKKk~G~lti~eD~~p~~l~W~p~~g~~~isI~l~~It~LQqTp~ts~KvmLKI~~k~~~~~~~~~~~~~~~~~~p~~~~ 88 (115)
T 1y5o_A 9 FEKVSGIIAINEDVSPAELTWRSTDGDKVHTVVLSTIDKLQATPASSEKMMLRLIGKVDESKKRKDNEGNEVVPKPQRHM 88 (115)
T ss_dssp SSSCEEEEEEECSSSSCEEEEEESSSSCEEEEESTTCSEEEECCTTCSSEEEEEEECSCCSSSCCCCSSCCSSCCCEEEE
T ss_pred EEecccEEEEccCCCcceEEEEECCCCccEEEEhhhhhhhhcCCCCCCceEEEEEEeccccccccCCCcCCCCCCcceEE
Confidence 3568999999998 89999866677799999999999877766555567777774 1 2378
Q ss_pred EEeCCCcchHHHHHHHHHh
Q psy11382 67 FVIPRERECYDIYVTLQKL 85 (328)
Q Consensus 67 f~~~~~~~~~~v~~~l~~l 85 (328)
|.|..-.++.+|=++|+..
T Consensus 89 F~FtnR~~~d~IKd~Lq~i 107 (115)
T 1y5o_A 89 FSFNNRTVMDNIKMTLQQI 107 (115)
T ss_dssp EEESCHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHHHH
Confidence 8898855777787887765
No 12
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=69.68 E-value=0.94 Score=46.57 Aligned_cols=54 Identities=20% Similarity=0.186 Sum_probs=0.0
Q ss_pred CCceeEEEEEeCceEEEEcCCC--CeeEEEecCccceEEeCCCC-CCCCcEEEEecc
Q psy11382 8 RKPFVGTLHLTTTALIFQDTDC--KKETWILLMHIASIERGPLS-TLGSPLIIRCKT 61 (328)
Q Consensus 8 ~~~~~GtL~lT~~hLiF~~~~~--~~e~wi~~~~I~~vek~~~s-~~g~~L~i~CKd 61 (328)
-....|++|||+|||||.+.+. +..+=|++..|.++|...+. .+..-|+|+-|.
T Consensus 40 ~~~q~G~~yLTShRiiyvD~~~p~~~s~~l~L~~I~~~e~~agflksSpKI~L~l~~ 96 (566)
T 1w7p_D 40 LQRQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGFLTRSPRLILFFKD 96 (566)
T ss_dssp ---------------------------------------------------------
T ss_pred ccccCceEEEEeeeEEEecCCCCcceEEEEEhHHcceeeeeeccccCCCceEEeecC
Confidence 3467899999999999997432 24578899999999975432 122345555543
No 13
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=68.13 E-value=5.3 Score=39.57 Aligned_cols=78 Identities=21% Similarity=0.162 Sum_probs=54.6
Q ss_pred CCCCCceeEEEEEeCceEEEEcCCCCe----------------eEEEecCccceEEeCCCCCCCCcEEEEeccccEEEEE
Q psy11382 5 ADLRKPFVGTLHLTTTALIFQDTDCKK----------------ETWILLMHIASIERGPLSTLGSPLIIRCKTFLSVTFV 68 (328)
Q Consensus 5 ~~~~~~~~GtL~lT~~hLiF~~~~~~~----------------e~wi~~~~I~~vek~~~s~~g~~L~i~CKdfr~~~f~ 68 (328)
........|+|.||+.+|+|...+... ..-+.+..|..|-++.---+...|+|-++|=+.+-|.
T Consensus 12 i~p~~~~~G~l~it~~~iyF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~~Rryll~~~alEif~~~g~s~~l~ 91 (414)
T 1t77_A 12 VAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANRVAVMFN 91 (414)
T ss_dssp ECSSCEEEEEEEECSSEEEEEECTTCHHHHHSCHHHHHHCCCTTCEEEGGGEEEEEEEEETTEEEEEEEEETTSCEEEEE
T ss_pred EeeecceeeEEEEeCCEEEEEeCCCcccccccccchhccccCcceEecchheeeeeeeeccCcceeEEEEEcCCcEEEEE
Confidence 345678899999999999998632110 0124567788887654333456899999999999999
Q ss_pred eCCCcchHHHHHHH
Q psy11382 69 IPRERECYDIYVTL 82 (328)
Q Consensus 69 ~~~~~~~~~v~~~l 82 (328)
|++......++..|
T Consensus 92 F~~~~~~~~~~~~l 105 (414)
T 1t77_A 92 FPDPATVKKVVNFL 105 (414)
T ss_dssp CSSHHHHHHHHHHS
T ss_pred cCCHHHHHHHHHhc
Confidence 99766555555443
No 14
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=60.88 E-value=44 Score=25.09 Aligned_cols=78 Identities=10% Similarity=-0.106 Sum_probs=53.8
Q ss_pred eeEEEEEeCceEEEEcCC--CCeeEEEecCccceEEe-CCCCCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhcC
Q psy11382 11 FVGTLHLTTTALIFQDTD--CKKETWILLMHIASIER-GPLSTLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLSR 87 (328)
Q Consensus 11 ~~GtL~lT~~hLiF~~~~--~~~e~wi~~~~I~~vek-~~~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~~ 87 (328)
..=-..|++..|.|.... ....--|++..+..++. .........+.|.+.+-+.+.|.-.++.++.+....|++.+.
T Consensus 22 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~ 101 (113)
T 1pls_A 22 KPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIK 101 (113)
T ss_dssp EEEEEEEETTEEEEESSTTCSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEECCEEEEEeCCCCCCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 344566778888877532 22334567777766642 222334467999999989999999999999999999988754
Q ss_pred C
Q psy11382 88 P 88 (328)
Q Consensus 88 p 88 (328)
.
T Consensus 102 ~ 102 (113)
T 1pls_A 102 C 102 (113)
T ss_dssp H
T ss_pred c
Confidence 3
No 15
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.86 E-value=39 Score=25.35 Aligned_cols=77 Identities=9% Similarity=-0.029 Sum_probs=49.8
Q ss_pred eeEEEEEeCceEEEEcCC--CCeeEEEecCccceEEeC---CCCCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHh
Q psy11382 11 FVGTLHLTTTALIFQDTD--CKKETWILLMHIASIERG---PLSTLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKL 85 (328)
Q Consensus 11 ~~GtL~lT~~hLiF~~~~--~~~e~wi~~~~I~~vek~---~~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l 85 (328)
..=-..|++..|.|...+ ....--|++..+. |+.. ........+.|.+.+-+.+.|.-.++.++.+....|++.
T Consensus 29 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~ 107 (117)
T 2d9y_A 29 NKRWFVLVDRCLFYYKDEKEESILGSIPLLSFR-VAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEA 107 (117)
T ss_dssp EEEEEEEETTEEEEESSTTCCSCCEEEECSSCE-EEECCTTTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHT
T ss_pred eEEEEEECCCEEEEECCCCCCCcCCEEEeCCeE-EEEcCccccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHH
Confidence 344456778888887522 2222234444433 2222 122334578888888899999999999999999999987
Q ss_pred cCC
Q psy11382 86 SRP 88 (328)
Q Consensus 86 ~~p 88 (328)
+..
T Consensus 108 ~~~ 110 (117)
T 2d9y_A 108 ARV 110 (117)
T ss_dssp TCC
T ss_pred Hhh
Confidence 654
No 16
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=58.73 E-value=44 Score=27.84 Aligned_cols=35 Identities=20% Similarity=0.108 Sum_probs=30.8
Q ss_pred CCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhc
Q psy11382 52 GSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLS 86 (328)
Q Consensus 52 g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~ 86 (328)
+.-|.++..+-.+.-+-|-.+++|..|++.|+++.
T Consensus 97 ~~~li~r~~~~~I~GiWf~~~~d~~~i~~~l~~l~ 131 (134)
T 2lyd_A 97 PPFLLYRNERSRIRGFWFYNSEECDRISGLVNGLL 131 (134)
T ss_dssp TTEEEEEEGGGEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcEEEEEecChHHHHHHHHHHHHHH
Confidence 45788888888899999999999999999999874
No 17
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.59 E-value=37 Score=25.76 Aligned_cols=74 Identities=9% Similarity=0.032 Sum_probs=46.2
Q ss_pred EEEEeCceEEEEcC--CCCeeEEEecCccc--eEEeCCCCCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhcC
Q psy11382 14 TLHLTTTALIFQDT--DCKKETWILLMHIA--SIERGPLSTLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLSR 87 (328)
Q Consensus 14 tL~lT~~hLiF~~~--~~~~e~wi~~~~I~--~vek~~~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~~ 87 (328)
-..|++..|.|... +....--|++..+. .++..........+.|.+.+-+.+.|.-+++.++.+...+|++.+.
T Consensus 43 ~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 43 WFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp EEEEETTEEEEESSTTCCSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCEEEEECCCCCCCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 34566677777642 22222234444433 3321112233457888888889999999999999999999988654
No 18
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=53.39 E-value=39 Score=25.68 Aligned_cols=76 Identities=11% Similarity=0.006 Sum_probs=49.1
Q ss_pred eEEEEEeCceEEEEcCC--CCeeEEEecCccceEEeCC---CCCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhc
Q psy11382 12 VGTLHLTTTALIFQDTD--CKKETWILLMHIASIERGP---LSTLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLS 86 (328)
Q Consensus 12 ~GtL~lT~~hLiF~~~~--~~~e~wi~~~~I~~vek~~---~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~ 86 (328)
.=-..|++..|.|...+ ....--|++..+ .|+... .......+.|.+.+-+.+.|.-.++.++.+....|+..+
T Consensus 30 kR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~-~v~~~~~~~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 108 (123)
T 1upq_A 30 RRWFVLSGHCLFYYKDSREESVLGSVLLPSY-NIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRAS 108 (123)
T ss_dssp EEEEEEETTEEEEESSTTCCSCCEEEEGGGC-EEEECCSSCTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCEEEEECCCCCcccceEEECCCC-EEEECCCCccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHH
Confidence 33455677777777422 222223444443 344332 122346788888888888999999999999999999987
Q ss_pred CC
Q psy11382 87 RP 88 (328)
Q Consensus 87 ~p 88 (328)
..
T Consensus 109 ~~ 110 (123)
T 1upq_A 109 RA 110 (123)
T ss_dssp C-
T ss_pred hc
Confidence 65
No 19
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=50.64 E-value=21 Score=27.46 Aligned_cols=74 Identities=11% Similarity=-0.036 Sum_probs=49.0
Q ss_pred EEEEeCceEEEEcCC--CCeeEEEecCccceEEeCC---CCCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhcCC
Q psy11382 14 TLHLTTTALIFQDTD--CKKETWILLMHIASIERGP---LSTLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLSRP 88 (328)
Q Consensus 14 tL~lT~~hLiF~~~~--~~~e~wi~~~~I~~vek~~---~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~~p 88 (328)
-..|++..|.|...+ ....--|++..+ .|+... .......+.|.+++-+.+.|.-.++.++.+....|++.+..
T Consensus 42 ~fvL~~~~L~yy~~~~~~~~~g~i~L~~~-~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 120 (128)
T 2dkp_A 42 WFVLSDLCLFYYRDEKEEGILGSILLPSF-QIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALV 120 (128)
T ss_dssp EEEEETTEEEEESSTTCCSEEEEECGGGS-EEEECCGGGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCEEEEECCCCCcccceEEEcCce-EEEEcCCcccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 345677777777532 222234555443 343332 12334679999998899999999999999999999887554
No 20
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=47.69 E-value=79 Score=26.04 Aligned_cols=35 Identities=14% Similarity=0.089 Sum_probs=31.0
Q ss_pred CCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhc
Q psy11382 52 GSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLS 86 (328)
Q Consensus 52 g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~ 86 (328)
+..|.++..+-.+.-+-|-+++||..|++.|+++.
T Consensus 91 ~~~l~~r~~~~~i~GiWf~~~~d~~~i~~~l~~ll 125 (127)
T 2qkl_A 91 DRYLIHRTENQHVVGLWMFDPNDMSRIFNIVKESL 125 (127)
T ss_dssp TTEEEEEETTTEEEEEEESSTHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCcEEEEEEEchHHHHHHHHHHHHHH
Confidence 45788888889999999999999999999999873
No 21
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.45 E-value=84 Score=23.32 Aligned_cols=73 Identities=11% Similarity=0.099 Sum_probs=50.5
Q ss_pred EEEEeCceEEEEcC--CCCeeEEEecCccceEEeCCC-CCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhcC
Q psy11382 14 TLHLTTTALIFQDT--DCKKETWILLMHIASIERGPL-STLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLSR 87 (328)
Q Consensus 14 tL~lT~~hLiF~~~--~~~~e~wi~~~~I~~vek~~~-s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~~ 87 (328)
-..|++..|.|... +....--|++..+..|+..+. ......+.|.+.+ +.+.|.-.+++++.+....|+....
T Consensus 28 ~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~-r~~~l~a~s~~e~~~Wi~ai~~~~~ 103 (115)
T 2dn6_A 28 WFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDKDGKKCLFLVKCFD-KTFEISASDKKKKQEWIQAIHSTIH 103 (115)
T ss_dssp EEEECSSCEEEESSTTCSSEEEEECCCTTCEEEEECCCTTCCSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEECCEEEEeCCCCCcccCcEEEecCcEEEEECCCCCCCeeEEEEEeCC-CEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 45567777777753 223344678888878876543 2334578888775 7788888888899999999887643
No 22
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=44.21 E-value=1e+02 Score=23.42 Aligned_cols=74 Identities=7% Similarity=-0.078 Sum_probs=50.7
Q ss_pred EEEEEeCceEEEEcC--CCCeeEEEecCccceEEeCCCCCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhcC
Q psy11382 13 GTLHLTTTALIFQDT--DCKKETWILLMHIASIERGPLSTLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLSR 87 (328)
Q Consensus 13 GtL~lT~~hLiF~~~--~~~~e~wi~~~~I~~vek~~~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~~ 87 (328)
--..|++..|.|... +....--|++..+..|+..........+.|.+.+ +.+.|.-+++.++.+...+|++...
T Consensus 37 R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~-r~~~l~a~s~~e~~~Wi~al~~~i~ 112 (126)
T 1fao_A 37 RWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPF-RTFYLCAKTGVEADEWIKILRWKLS 112 (126)
T ss_dssp EEEEEETTEEEEESSTTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEEETT-EEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCEEEEeCCCCCCCceeEEEccceEEEEecccCCCCCEEEEEeCC-cEEEEECCCHHHHHHHHHHHHHHHH
Confidence 345567777877742 2223346777777777765433344568888765 7788888888899999999988644
No 23
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=43.72 E-value=93 Score=23.18 Aligned_cols=74 Identities=14% Similarity=-0.041 Sum_probs=47.9
Q ss_pred EEEeCceEEEEcCCC-CeeEEEecCccce-EEeCCCCCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhcCC
Q psy11382 15 LHLTTTALIFQDTDC-KKETWILLMHIAS-IERGPLSTLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLSRP 88 (328)
Q Consensus 15 L~lT~~hLiF~~~~~-~~e~wi~~~~I~~-vek~~~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~~p 88 (328)
..|++..|.|..... ...--+.+..+.. |+..+.......+.|.+.+=|.+.|.-.++.++.+....|++.+..
T Consensus 27 fvL~~~~L~yyk~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~~~ 102 (107)
T 2cof_A 27 CSVRDNHLHFYQDRNRSKVAQQPLSLVGCEVVPDPSPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSESGS 102 (107)
T ss_dssp EEECSSCEEEECSSTTCSEEEEEECTTTCEEECCCBTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHSSC
T ss_pred EEEECCEEEEEeCCcccCCCeeEEeccceEEEECCCCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 457777887775322 2222333333332 5543333344678888887788888888889999999999987554
No 24
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=42.63 E-value=93 Score=22.82 Aligned_cols=72 Identities=14% Similarity=0.021 Sum_probs=44.0
Q ss_pred EEEeCc--eEEEEcCC--C--CeeEEEecCccceEEeCCC---CCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHh
Q psy11382 15 LHLTTT--ALIFQDTD--C--KKETWILLMHIASIERGPL---STLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKL 85 (328)
Q Consensus 15 L~lT~~--hLiF~~~~--~--~~e~wi~~~~I~~vek~~~---s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l 85 (328)
..|++. .|.|.... . ...+.+....|..++..+. ......+.|.+.+=+.+.|.-+++.++.+...+|++.
T Consensus 28 fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~ 107 (109)
T 2i5f_A 28 FILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMA 107 (109)
T ss_dssp EEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEeCCCcEEEEECCCCCCCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 456654 77776422 1 2233333333444443321 1234678999998888888888888999999999876
Q ss_pred c
Q psy11382 86 S 86 (328)
Q Consensus 86 ~ 86 (328)
+
T Consensus 108 ~ 108 (109)
T 2i5f_A 108 S 108 (109)
T ss_dssp H
T ss_pred h
Confidence 4
No 25
>2gcl_A Hypothetical 63.0 kDa protein in DAK1-ORC1 intergenic region; chromaint, double PH domain, yfact, DNA replication, RPA; 2.21A {Saccharomyces cerevisiae} SCOP: b.55.1.10 PDB: 2gcj_A
Probab=37.36 E-value=1.2e+02 Score=28.01 Aligned_cols=72 Identities=21% Similarity=0.142 Sum_probs=50.5
Q ss_pred CCceeEEEEEeCceEEEEcCCCCeeEEEecCccceEEeC--CC---CCCCCcEEEEeccc-cEEEEE-eCCCcchHHHHH
Q psy11382 8 RKPFVGTLHLTTTALIFQDTDCKKETWILLMHIASIERG--PL---STLGSPLIIRCKTF-LSVTFV-IPRERECYDIYV 80 (328)
Q Consensus 8 ~~~~~GtL~lT~~hLiF~~~~~~~e~wi~~~~I~~vek~--~~---s~~g~~L~i~CKdf-r~~~f~-~~~~~~~~~v~~ 80 (328)
.++..|.||.-.-+++|.. +.-++|++..|++|+-. ++ +++-.-|.|.+|+= ..+.|. |++++ ...+.+
T Consensus 171 ~ka~eG~LypL~~gflF~~---KP~~~i~~~~I~sV~fsrvg~~~~~~rTFdl~v~~k~g~~~~~Fs~IdreE-~~~L~~ 246 (261)
T 2gcl_A 171 FKANEGYLYPLDNAFFFLT---KPTLYIPFSDVSMVNISRAGQTSTSSRTFDLEVVLRSNRGSTTFANISKEE-QQLLEQ 246 (261)
T ss_dssp ETTEEEEEEECSSEEEEES---SSCEEEEGGGEEEEEEEC--------CEEEEEEEESTTCCEEEEEEEEGGG-HHHHHH
T ss_pred ccCCceEEEEecCceEEee---CCcEEEEhhHeeEEEEEeccCCcccCceEEEEEEEcCCCccEEEcccCHHH-HHHHHH
Confidence 4677899999999999964 45799999999999932 32 23346789999985 677776 55543 444444
Q ss_pred HHH
Q psy11382 81 TLQ 83 (328)
Q Consensus 81 ~l~ 83 (328)
=|+
T Consensus 247 ylk 249 (261)
T 2gcl_A 247 FLK 249 (261)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 26
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=37.21 E-value=1.7e+02 Score=24.01 Aligned_cols=77 Identities=14% Similarity=0.078 Sum_probs=54.8
Q ss_pred eeEEEEEeCceEEEEcCCC-Cee--EEEecCccceEEeCCCCC------CCCcEEEEeccccEEEEEeCCCcchHHHHHH
Q psy11382 11 FVGTLHLTTTALIFQDTDC-KKE--TWILLMHIASIERGPLST------LGSPLIIRCKTFLSVTFVIPRERECYDIYVT 81 (328)
Q Consensus 11 ~~GtL~lT~~hLiF~~~~~-~~e--~wi~~~~I~~vek~~~s~------~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~ 81 (328)
..=-..|++..|.|...+. ..+ --|++..|..|+...... ......|...+ |.+.|.-+++.|+.+..++
T Consensus 37 KkRwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~-rt~~l~A~s~~e~~~Wi~a 115 (164)
T 2lul_A 37 KERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDA-NTLYIFAPSPQSRDLWVKK 115 (164)
T ss_dssp EEEEEEEESSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSS-CEEEEECSSHHHHHHHHHH
T ss_pred eeEEEEEECCEEEEEeccCcccccccEEEEeeeEEEEeccccccCcccccceeEEEecCC-cEEEEECCCHHHHHHHHHH
Confidence 3445788999998875321 222 268888888888764322 22456777766 7777888888899999999
Q ss_pred HHHhcCC
Q psy11382 82 LQKLSRP 88 (328)
Q Consensus 82 l~~l~~p 88 (328)
|++....
T Consensus 116 L~~~i~~ 122 (164)
T 2lul_A 116 LKEEIKN 122 (164)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 9998776
No 27
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=36.17 E-value=1.2e+02 Score=21.91 Aligned_cols=75 Identities=9% Similarity=-0.040 Sum_probs=48.7
Q ss_pred eeEEEEEeCceEEEEcCCC--CeeEEEecCccceEEeC---CCCCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHh
Q psy11382 11 FVGTLHLTTTALIFQDTDC--KKETWILLMHIASIERG---PLSTLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKL 85 (328)
Q Consensus 11 ~~GtL~lT~~hLiF~~~~~--~~e~wi~~~~I~~vek~---~~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l 85 (328)
..=-..|++..|.+...+. ...--|++..+..+... ........+.|.+++-+.+.|.-+++.++.+...+|+..
T Consensus 24 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~ 103 (108)
T 1u5d_A 24 QKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFL 103 (108)
T ss_dssp EEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHH
T ss_pred eeeEEEEeCCEEEEecCCCCCCCCEEEEecceEEEeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHH
Confidence 3445667888888875322 22234555555532211 112234678999998888899999999999999888875
No 28
>3fss_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; 1.43A {Saccharomyces cerevisiae} PDB: 3tw1_A* 3tvv_A* 3gyp_A 3gyo_A 3to1_A
Probab=34.12 E-value=1.4e+02 Score=27.41 Aligned_cols=64 Identities=22% Similarity=0.117 Sum_probs=49.2
Q ss_pred CCCceeEEEEEeCceEEEEcCCCCeeEEEecCccceEEeCCCCCCCCcEEEEeccccEEEEE-eCCC
Q psy11382 7 LRKPFVGTLHLTTTALIFQDTDCKKETWILLMHIASIERGPLSTLGSPLIIRCKTFLSVTFV-IPRE 72 (328)
Q Consensus 7 ~~~~~~GtL~lT~~hLiF~~~~~~~e~wi~~~~I~~vek~~~s~~g~~L~i~CKdfr~~~f~-~~~~ 72 (328)
.+++.+|.||.-.-+++|-. .+.-+.|++..|++|+-...+++-..|.|..|+=.-+.|. |+++
T Consensus 161 ~~kAkeG~LyfL~~~ilFgf--~KP~l~i~~~dI~svs~Srv~~RTFdl~v~~k~g~e~eFsmIDq~ 225 (237)
T 3fss_A 161 HRGTKEGTLYFLPDHIIFGF--KKPILLLDASDIESITYSSITRLTFNASLVTKDGEKYEFSMIDQT 225 (237)
T ss_dssp ESSSSEEEEEECSSEEEEES--SSSCEEEEGGGEEEEEEESCCSSEEEEEEEETTSCEEEEEEEEGG
T ss_pred EcCCCCeEEEEecCceEEec--CCCeEEEEehhEEEEEEEeccCcEEEEEEEECCCCeEEEeecCHH
Confidence 36788999999999999963 2456999999999998655455557889988876667776 3443
No 29
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=31.27 E-value=1.2e+02 Score=25.33 Aligned_cols=78 Identities=15% Similarity=0.050 Sum_probs=53.8
Q ss_pred ceeEEEEEeCceEEEEcC----CCC--eeEEEecCccceEEeC---CCCCC---------------C--------CcEEE
Q psy11382 10 PFVGTLHLTTTALIFQDT----DCK--KETWILLMHIASIERG---PLSTL---------------G--------SPLII 57 (328)
Q Consensus 10 ~~~GtL~lT~~hLiF~~~----~~~--~e~wi~~~~I~~vek~---~~s~~---------------g--------~~L~i 57 (328)
-..=-..|+...|.|... ... ..=-|++..|..||.. ..... | ....|
T Consensus 24 WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I 103 (169)
T 1btk_A 24 FKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQV 103 (169)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---------CCTTHHHHCCCEEEEE
T ss_pred CceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccccCcccccccccccccccccEEE
Confidence 344557899999999863 111 2237888888888876 21110 0 34667
Q ss_pred EeccccEEEEEeCCCcchHHHHHHHHHhcCC
Q psy11382 58 RCKTFLSVTFVIPRERECYDIYVTLQKLSRP 88 (328)
Q Consensus 58 ~CKdfr~~~f~~~~~~~~~~v~~~l~~l~~p 88 (328)
...+ +.+.|.-+++.|..+..++|++....
T Consensus 104 ~t~~-rt~yl~A~s~~E~~eWi~aI~~~i~~ 133 (169)
T 1btk_A 104 VYDE-GPLYVFSPTEELRKRWIHQLKNVIRY 133 (169)
T ss_dssp EETT-CCEEEEESCHHHHHHHHHHHHHHHTT
T ss_pred EeCC-ceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 7766 66778888889999999999998665
No 30
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=29.66 E-value=1.4e+02 Score=21.96 Aligned_cols=76 Identities=12% Similarity=0.011 Sum_probs=48.9
Q ss_pred EEEEEeCceEEEEcCC--CCeeEEEecCccceEEeCCC--CCCCCcEEEEec-------cccEEEEEeCCCcchHHHHHH
Q psy11382 13 GTLHLTTTALIFQDTD--CKKETWILLMHIASIERGPL--STLGSPLIIRCK-------TFLSVTFVIPRERECYDIYVT 81 (328)
Q Consensus 13 GtL~lT~~hLiF~~~~--~~~e~wi~~~~I~~vek~~~--s~~g~~L~i~CK-------dfr~~~f~~~~~~~~~~v~~~ 81 (328)
=-..|++..|.+...+ ....--|++..+..++..+. ......+.|.+. +-+.+.|.-+++.++.+....
T Consensus 27 R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~a 106 (118)
T 1v89_A 27 RYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKF 106 (118)
T ss_dssp EEEEEETTEEEEESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHH
T ss_pred EEEEEECCEEEEEeCCCCCCceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHH
Confidence 3456777888887522 22223456555544433221 223456888873 678888998999999999999
Q ss_pred HHHhcCC
Q psy11382 82 LQKLSRP 88 (328)
Q Consensus 82 l~~l~~p 88 (328)
|++....
T Consensus 107 l~~~~~~ 113 (118)
T 1v89_A 107 LRRVAGS 113 (118)
T ss_dssp HHHHHHC
T ss_pred HHHHHcc
Confidence 9987654
No 31
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=26.52 E-value=2e+02 Score=21.39 Aligned_cols=73 Identities=12% Similarity=0.083 Sum_probs=51.4
Q ss_pred CceeEEEEEeCceEEEEcCC--CCeeEEEecCccceEEeCCCCCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhc
Q psy11382 9 KPFVGTLHLTTTALIFQDTD--CKKETWILLMHIASIERGPLSTLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLS 86 (328)
Q Consensus 9 ~~~~GtL~lT~~hLiF~~~~--~~~e~wi~~~~I~~vek~~~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~ 86 (328)
.-..=-..|++..|.+...+ ....--|++..+..|+..+ ...+.|.. .-|.+.|.-.++.++.+....|++..
T Consensus 24 ~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~----~~~F~i~~-~~r~~~l~a~s~~e~~~Wi~~l~~~~ 98 (115)
T 2cod_A 24 MFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG----DNKFEVVT-TQRTFVFRVEKEEERNDWISILLNAL 98 (115)
T ss_dssp CCEEEEEEECSSEEEEEESSCCSSCCCEEETTTEEEEEEET----TTEEEEEE-SSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEECCEEEEEcCCCCcccCCEEECCcceEEEeCC----CCEEEEEe-CCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 34445567788888877532 2233467788888887654 34577774 45778888888889999999999875
No 32
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=26.42 E-value=2.4e+02 Score=22.19 Aligned_cols=78 Identities=8% Similarity=-0.029 Sum_probs=51.7
Q ss_pred ceeEEEEEeCceEEEEcCCC--CeeEEEecCccceEEeCC----CCCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHH
Q psy11382 10 PFVGTLHLTTTALIFQDTDC--KKETWILLMHIASIERGP----LSTLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQ 83 (328)
Q Consensus 10 ~~~GtL~lT~~hLiF~~~~~--~~e~wi~~~~I~~vek~~----~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~ 83 (328)
...=-..|++..|.+..... ...--|++..+. |...+ .......+.|.+.+-|.+.|.-.++.++.+....|+
T Consensus 37 WkkR~fvL~~~~L~yyk~~~~~~~~g~i~L~~~~-v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~ 115 (148)
T 1u5f_A 37 WQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYD-VRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLK 115 (148)
T ss_dssp EEEEEEEEETTEEEEESSTTCSSCSEEEECTTCE-EEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHH
T ss_pred ceeEEEEEECCEEEEEcCCCCcccceEEEcCCcE-EEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHH
Confidence 34445677888888875322 222345555554 33222 122236789999888999999999999999999999
Q ss_pred HhcCC
Q psy11382 84 KLSRP 88 (328)
Q Consensus 84 ~l~~p 88 (328)
+....
T Consensus 116 ~~i~~ 120 (148)
T 1u5f_A 116 FILQD 120 (148)
T ss_dssp HHCC-
T ss_pred HHHHH
Confidence 97554
No 33
>2kup_A Fibroblast growth factor receptor substrate 3; complex, SNT-2, PTB domain, HALK, structural genomics, signa protein, NPPSFA; NMR {Homo sapiens} PDB: 2ys5_A
Probab=25.49 E-value=2.4e+02 Score=23.88 Aligned_cols=66 Identities=18% Similarity=0.251 Sum_probs=41.6
Q ss_pred ceeEEEEEeCceEEEEcCCCCeeEEEecCccceEEe---------CCCCCCCCcEEEEeccccEEEEEeCCCcchHHHHH
Q psy11382 10 PFVGTLHLTTTALIFQDTDCKKETWILLMHIASIER---------GPLSTLGSPLIIRCKTFLSVTFVIPRERECYDIYV 80 (328)
Q Consensus 10 ~~~GtL~lT~~hLiF~~~~~~~e~wi~~~~I~~vek---------~~~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~ 80 (328)
.-.|+|.||+..|++......--.| ||..|-+--. ......|.+ ++.|... ++.+||.
T Consensus 33 ~G~~~L~Lt~~~L~L~~~~~~~~~W-Py~~LRRYG~d~~~FsFEaGRrC~tGeG---------iF~F~t~---~~e~If~ 99 (146)
T 2kup_A 33 LGSGVMELTQSELVLHLHRREAVRW-PYLCLRRYGYDSNLFSFESGRRCQTGQG---------IFAFKCS---RAEEIFN 99 (146)
T ss_dssp EEEEEEEECSSCEEEECSSSCCEEE-CGGGCSCEEEETTEEEEEECTTSSSCSE---------EEEEECT---THHHHHH
T ss_pred ceeEEEEEccCEEEEEcCCCCeeEc-CHHHhhhcCccCCEEEEEcCCCCCCCCC---------EEEEEcC---CHHHHHH
Confidence 4579999999999998765444567 6666554432 222223332 3334433 4779999
Q ss_pred HHHHhcCC
Q psy11382 81 TLQKLSRP 88 (328)
Q Consensus 81 ~l~~l~~p 88 (328)
.|+...+-
T Consensus 100 ~l~~~iq~ 107 (146)
T 2kup_A 100 LLQDLMQC 107 (146)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhc
Confidence 99987654
No 34
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=25.37 E-value=1.7e+02 Score=21.63 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=29.5
Q ss_pred CCcEEEEeccccEEEEEeCCCcchHHHHHHHHHh
Q psy11382 52 GSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKL 85 (328)
Q Consensus 52 g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l 85 (328)
...+.|.+.+=|.+.|.-++++|+.+...+|++.
T Consensus 76 ~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a 109 (112)
T 3aj4_A 76 DCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDS 109 (112)
T ss_dssp GGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHH
Confidence 3578999988899999999999999999999875
No 35
>3f5r_A FACT complex subunit POB3; APC7736, FACT complex (SPT16P-POB3P), saccharomyces cerevisi structural genomics, PSI-2; 1.70A {Saccharomyces cerevisiae}
Probab=23.94 E-value=3.7e+02 Score=23.65 Aligned_cols=63 Identities=13% Similarity=0.178 Sum_probs=51.9
Q ss_pred CceeEEEEEeCceEEEEcC-CCC-------eeEEEecCccceEEeCCCCCCCCcEEEEeccccEEEEE-eCCC
Q psy11382 9 KPFVGTLHLTTTALIFQDT-DCK-------KETWILLMHIASIERGPLSTLGSPLIIRCKTFLSVTFV-IPRE 72 (328)
Q Consensus 9 ~~~~GtL~lT~~hLiF~~~-~~~-------~e~wi~~~~I~~vek~~~s~~g~~L~i~CKdfr~~~f~-~~~~ 72 (328)
....|.|-|+.--|.|... .+. +..-|+-.-|..++=...+ +|+.|.|..|+=.+++|+ |..+
T Consensus 34 s~~~G~lkla~~glgWK~~~~tG~~~~~~~k~~~i~~sdI~~a~W~r~~-rg~~LrI~~K~g~~~~fdGF~~~ 105 (191)
T 3f5r_A 34 SKFSGRFRIADSGLGWKISTSGGSAANQARKPFLLPATELSTVQWSRGC-RGYDLKINTKNQGVIQLDGFSQD 105 (191)
T ss_dssp CSSCEEEEEETTEEEEEECCSSTTTHHHHCCCEEEEGGGEEEEEEEECS-SSEEEEEEESSSCEEEEEEECGG
T ss_pred CCcccEEEEcCCceEEeecCCCCccccccCceEEEcHHHcCeEEEEEcc-CCcEEEEEECCCceEEecCCCHH
Confidence 4568999999999999976 555 6678999999999843333 789999999999999998 7654
No 36
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=23.78 E-value=1.7e+02 Score=22.28 Aligned_cols=38 Identities=13% Similarity=0.002 Sum_probs=31.6
Q ss_pred CCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhcCC
Q psy11382 51 LGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLSRP 88 (328)
Q Consensus 51 ~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~~p 88 (328)
....+.|.+.+=+.+.|.-.++.++.+...+|++.+..
T Consensus 84 ~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 84 EENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp SCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 45678999988777888888889999999999988654
No 37
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=22.75 E-value=2.2e+02 Score=20.55 Aligned_cols=76 Identities=12% Similarity=-0.021 Sum_probs=47.4
Q ss_pred CCceeEEEEEeCceEEEEcCCC--------CeeEEEecCccceEEeCC-CCCCCCcEEEEeccccEEEEEeCCCcchHHH
Q psy11382 8 RKPFVGTLHLTTTALIFQDTDC--------KKETWILLMHIASIERGP-LSTLGSPLIIRCKTFLSVTFVIPRERECYDI 78 (328)
Q Consensus 8 ~~~~~GtL~lT~~hLiF~~~~~--------~~e~wi~~~~I~~vek~~-~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v 78 (328)
+.-..=-..|++..|.|...+. ..+.-|.+.. ..|+..+ .......+.|.+.+-+.+.|.-+++.++.+.
T Consensus 21 ~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~-~~~~~~~~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~W 99 (106)
T 1btn_A 21 RSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKE-AICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTW 99 (106)
T ss_dssp CCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTT-CEEEECSSCCSSSSEEEEECTTSCEEEEECSSHHHHHHH
T ss_pred CChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCC-CEEEEcccccCCccEEEEEecCCCEEEEECCCHHHHHHH
Confidence 3344556778899999885321 1222233221 1222222 1233457889888989999999998899998
Q ss_pred HHHHHH
Q psy11382 79 YVTLQK 84 (328)
Q Consensus 79 ~~~l~~ 84 (328)
..+|++
T Consensus 100 i~ai~~ 105 (106)
T 1btn_A 100 IQAISS 105 (106)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 888864
No 38
>2cy5_A Epidermal growth factor receptor pathway substrate 8-like protein 1; structural genomics, signal transduction, phosphorylation, PTB domain, NPPSFA; 1.90A {Mus musculus} SCOP: b.55.1.2 PDB: 2cy4_A
Probab=21.56 E-value=3.6e+02 Score=22.54 Aligned_cols=76 Identities=17% Similarity=0.041 Sum_probs=52.0
Q ss_pred ceeEEEEEeCceEEEEcCCCCeeE-EEecCccceEEeCC-CCCCCCcEEEEecccc----EEEEEeCCCcchHHHHHHHH
Q psy11382 10 PFVGTLHLTTTALIFQDTDCKKET-WILLMHIASIERGP-LSTLGSPLIIRCKTFL----SVTFVIPRERECYDIYVTLQ 83 (328)
Q Consensus 10 ~~~GtL~lT~~hLiF~~~~~~~e~-wi~~~~I~~vek~~-~s~~g~~L~i~CKdfr----~~~f~~~~~~~~~~v~~~l~ 83 (328)
+..=.|.+++.++...+.++++|+ -+|+..|.++.... ...-++.|.|.||+=. -++|.=-.+-.|..|.+-|+
T Consensus 48 ~Q~m~L~v~~~~v~LlD~et~eelE~fpl~~I~~~~av~~~~~y~siLllv~q~~~~~~~~iH~FQc~ev~A~~v~~di~ 127 (140)
T 2cy5_A 48 AQEMLLRVSPSQVTLLDPVSKEELESYPLDAIVRCDAVMPRGRSRSLLLLVCQEPERAQPDVHFFQGLLLGAELIREDIQ 127 (140)
T ss_dssp CEEEEEEECSSEEEEECTTTCCEEEEEEGGGEEEEEEECCSSCSSCEEEEEECCTTCSSCEEEEEEECTTHHHHHHHHHH
T ss_pred cceeEEEECCCeEEEEccCccchhhcCChhhceeccccCCccccCcEEEEEEecCCCCCccEEEEEeccccHHHHHHHHH
Confidence 335578899999999998888887 78999999998653 3344678999998543 23322223334666666666
Q ss_pred Hh
Q psy11382 84 KL 85 (328)
Q Consensus 84 ~l 85 (328)
+.
T Consensus 128 ~a 129 (140)
T 2cy5_A 128 GA 129 (140)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 39
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=21.12 E-value=1.9e+02 Score=20.66 Aligned_cols=68 Identities=9% Similarity=-0.056 Sum_probs=42.2
Q ss_pred EEEEeCceEEEEcCCCC----eeEEEecCccceEEeCCCCCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHh
Q psy11382 14 TLHLTTTALIFQDTDCK----KETWILLMHIASIERGPLSTLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKL 85 (328)
Q Consensus 14 tL~lT~~hLiF~~~~~~----~e~wi~~~~I~~vek~~~s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l 85 (328)
-..|++..|.+...+.. ..--|.+..+..+. .......+.|.+.+ |.+.|.-.++.++.+..++|++.
T Consensus 21 ~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~~---~~~~~~~F~i~~~~-r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 21 WVVLKNNALSYYKSEDETEYGCRGSICLSKAVITP---HDFDECRFDISVND-SVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp EEEEETTEEEEESSTTGGGTCCSEEEETTTCEEEE---CSSCSSEEEEEETT-EEEEEECCSSCCTHHHHHHHHHH
T ss_pred EEEEECCEEEEEEecccccccceeeEecceeeeec---CcccceeEEEEeCC-eEEEEECCCHHHHHHHHHHHHhh
Confidence 35678888887642211 11223333322222 12234567888776 78888889999999999999874
No 40
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=20.57 E-value=2.2e+02 Score=21.28 Aligned_cols=76 Identities=7% Similarity=-0.040 Sum_probs=50.9
Q ss_pred eeEEEEEeCceEEEEcCC--CCeeEEEecCccceEEeCCC---CCCCCcEEEEeccccEEEEEeCCCcchHHHHHHHHHh
Q psy11382 11 FVGTLHLTTTALIFQDTD--CKKETWILLMHIASIERGPL---STLGSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKL 85 (328)
Q Consensus 11 ~~GtL~lT~~hLiF~~~~--~~~e~wi~~~~I~~vek~~~---s~~g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l 85 (328)
..=-..|++..|.|...+ ....--|++..+..|+.... ......+.|.+.+ +.+.|.-.++.++.+....|++.
T Consensus 31 k~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~-r~~~l~a~s~~e~~~W~~al~~~ 109 (125)
T 1eaz_A 31 KRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTS-RTFYVQADSPEEMHSWIKAVSGA 109 (125)
T ss_dssp EEEEEEECSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCEEEEEcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEEeCC-cEEEEEcCCHHHHHHHHHHHHHH
Confidence 344456778888877532 22234678888777775321 1234567887764 77778888888999999999887
Q ss_pred cC
Q psy11382 86 SR 87 (328)
Q Consensus 86 ~~ 87 (328)
..
T Consensus 110 i~ 111 (125)
T 1eaz_A 110 IV 111 (125)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 41
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=20.22 E-value=2.4e+02 Score=21.27 Aligned_cols=36 Identities=14% Similarity=0.094 Sum_probs=31.1
Q ss_pred CCcEEEEeccccEEEEEeCCCcchHHHHHHHHHhcC
Q psy11382 52 GSPLIIRCKTFLSVTFVIPRERECYDIYVTLQKLSR 87 (328)
Q Consensus 52 g~~L~i~CKdfr~~~f~~~~~~~~~~v~~~l~~l~~ 87 (328)
...+.|.+.+-+.+.|.-.+++++.+....|++...
T Consensus 89 ~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 89 GNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp SSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred CceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 467999999988888888888999999999998754
Done!