BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11384
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P13008|RS26_DROME 40S ribosomal protein S26 OS=Drosophila melanogaster GN=RpS26 PE=1
SV=1
Length = 114
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/107 (84%), Positives = 97/107 (90%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRNGGR+KH RGHV PVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEAS +
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFPRSVS 107
SY LPKLYAKLHYCVSCAIHSKVVRNRS+ RRIRTPP R+FP+ ++
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFPKDMA 107
>sp|Q9GT45|RS26_ANOGA 40S ribosomal protein S26 OS=Anopheles gambiae GN=RpS26 PE=3 SV=2
Length = 115
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/107 (84%), Positives = 96/107 (89%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRNGGR KH RGHV VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++AS Y
Sbjct: 1 MTKKRRNGGRCKHNRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYS 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFPRSVS 107
SY LPKLYAKLHYCVSCAIHSKVVRNRSK RRIRTPPQR+FP+ ++
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSKETRRIRTPPQRSFPKDMN 107
>sp|P62856|RS26_RAT 40S ribosomal protein S26 OS=Rattus norvegicus GN=Rps26 PE=3 SV=3
Length = 115
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 88/100 (88%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPR 100
>sp|P49171|RS26_PIG 40S ribosomal protein S26 OS=Sus scrofa GN=RPS26 PE=3 SV=4
Length = 115
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 88/100 (88%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPR 100
>sp|P62855|RS26_MOUSE 40S ribosomal protein S26 OS=Mus musculus GN=Rps26 PE=2 SV=3
Length = 115
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 88/100 (88%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPR 100
>sp|P61251|RS26_MACFA 40S ribosomal protein S26 OS=Macaca fascicularis GN=RPS26 PE=3 SV=3
Length = 115
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 88/100 (88%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPR 100
>sp|P62854|RS26_HUMAN 40S ribosomal protein S26 OS=Homo sapiens GN=RPS26 PE=1 SV=3
Length = 115
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 88/100 (88%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPR 100
>sp|Q56JV1|RS26_BOVIN 40S ribosomal protein S26 OS=Bos taurus GN=RPS26 PE=3 SV=3
Length = 115
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 88/100 (88%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPR 100
>sp|P30742|RS26_CRICR 40S ribosomal protein S26 OS=Cricetus cricetus GN=RPS26 PE=3 SV=3
Length = 115
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 88/100 (88%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
+Y LPKLY +LHYCVSCAIHSKVVRNRS+ R+ RTPP R
Sbjct: 61 AYVLPKLYVELHYCVSCAIHSKVVRNRSREARKDRTPPPR 100
>sp|Q6Q312|RS26_SHEEP 40S ribosomal protein S26 OS=Ovis aries GN=RPS26 PE=3 SV=3
Length = 115
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/100 (80%), Positives = 87/100 (87%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EA +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEAGVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPR 100
>sp|P27085|RS26_OCTVU 40S ribosomal protein S26 OS=Octopus vulgaris GN=RPS26 PE=2 SV=1
Length = 127
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/103 (77%), Positives = 87/103 (84%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR K GRGHV +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++AS Y+
Sbjct: 1 MTSKRRNNGRGKKGRGHVKYIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYE 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
Y LPKLYAKL YCVSCAIHSK+VRNRS+ R+ RTPP R P
Sbjct: 61 VYALPKLYAKLLYCVSCAIHSKIVRNRSREARKDRTPPIRFRP 103
>sp|Q8LPJ7|RS262_ARATH 40S ribosomal protein S26-2 OS=Arabidopsis thaliana GN=RPS26B PE=2
SV=2
Length = 133
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 86/100 (86%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRNGGR+KH RGHVNP+RC+NC +C PKDKAIK+F++RNIVE AA+RD+ EAS Y+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y LPKLYAK YCVSCAIHS VVR RS+++RR+RTPP R
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPR 100
>sp|P49206|RS261_ARATH 40S ribosomal protein S26-1 OS=Arabidopsis thaliana GN=RPS26A PE=2
SV=2
Length = 131
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 86/100 (86%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRNGGR+KH RGHVNP+RC+NC +C PKDKAIK+F++RNIVE AA+RD+ EAS Y+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y LPKLYAK YCVSCAIHS VVR RS+++RR+RTPP R
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPR 100
>sp|Q9LYK9|RS263_ARATH 40S ribosomal protein S26-3 OS=Arabidopsis thaliana GN=RPS26C PE=2
SV=1
Length = 130
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 85/100 (85%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRNGGR+KH RGHV P+RC+NC +C PKDKAIK+F++RNIVE AA+RD+ EAS Y+
Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y LPKLYAK YCVSCAIHS VVR RS+++RR+RTPP R
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPR 100
>sp|Q5JNZ5|RS26L_HUMAN Putative 40S ribosomal protein S26-like 1 OS=Homo sapiens
GN=RPS26P11 PE=5 SV=1
Length = 115
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/100 (75%), Positives = 82/100 (82%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN +K GRGHV P+RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI+E S +
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ + RTPP R
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPPPR 100
>sp|O45499|RS26_CAEEL 40S ribosomal protein S26 OS=Caenorhabditis elegans GN=rps-26 PE=3
SV=1
Length = 117
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 81/100 (81%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K RGHV +RCTNC RC PKDKAIKKFV+RNIVEAAAVRDI +AS Y
Sbjct: 1 MTFKRRNHGRNKKNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYT 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y LPKLY KLHYC++CAIHSKVVRNRS+ RR R PP R
Sbjct: 61 QYALPKLYHKLHYCIACAIHSKVVRNRSREARRDRNPPPR 100
>sp|Q9UTG4|RS26B_SCHPO 40S ribosomal protein S26-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps26b PE=3 SV=1
Length = 119
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 82/100 (82%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+KHGRGHV VRC NC+R VPKDKAIK++ IRN+VE AA+RD++EAS Y
Sbjct: 1 MTQKRRNNGRNKHGRGHVKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYS 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y +PKLY KL YCVSCAIHS+VVR RS+ RRIRTPP R
Sbjct: 61 EYTIPKLYIKLQYCVSCAIHSRVVRVRSREGRRIRTPPPR 100
>sp|P21772|RS26_NEUCR 40S ribosomal protein S26E OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rps-26 PE=3 SV=2
Length = 119
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 88/119 (73%), Gaps = 4/119 (3%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
M KR+N GR+K GRGHV P+RC+NC+RC PKDKAIK+F IRN+VE+AA+RDI++AS +
Sbjct: 1 MVKKRKNNGRNKKGRGHVKPIRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFA 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR----NFPRSVSLTEGTVTA 115
Y +PK+Y KL YCVSCAIH K+VR RS+ RR R PP R + V+ T+G TA
Sbjct: 61 EYTVPKMYLKLQYCVSCAIHGKIVRVRSREGRRNRAPPPRVRYNKDGKKVTPTQGAKTA 119
>sp|P39939|RS26B_YEAST 40S ribosomal protein S26-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS26B PE=1 SV=1
Length = 119
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 80/100 (80%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
M KR + GR+K GRGHV PVRC NC++ +PKDKAIK+ IRNIVEAAAVRD++EAS Y
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y LPK Y KLHYCVSCAIH+++VR RS+ DR+ R PPQR
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQR 100
>sp|P39938|RS26A_YEAST 40S ribosomal protein S26-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS26A PE=1 SV=1
Length = 119
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 80/100 (80%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
M KR + GR+K GRGHV PVRC NC++ +PKDKAIK+ IRNIVEAAAVRD++EAS Y
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y LPK Y KLHYCVSCAIH+++VR RS+ DR+ R PPQR
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQR 100
>sp|Q9UT56|RS26A_SCHPO 40S ribosomal protein S26-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps26a PE=3 SV=1
Length = 120
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/100 (68%), Positives = 81/100 (81%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+KHGRGH VRC NC+R VPKDKAIK++ IRN+VE AA+RD++EAS Y
Sbjct: 1 MTQKRRNCGRNKHGRGHTKFVRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYS 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y +PK+Y KL YCVSCAIH++VVR RS+ RRIRTPP R
Sbjct: 61 EYAIPKIYVKLQYCVSCAIHARVVRVRSREGRRIRTPPPR 100
>sp|O93931|RS26_SCHCO 40S ribosomal protein S26 OS=Schizophyllum commune GN=RPS26 PE=2
SV=1
Length = 126
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/100 (68%), Positives = 81/100 (81%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRNGGR+K GRGHV VRC+NC+RCV KDKAIK+F +RN+VE+AA+RDI++AS Y
Sbjct: 1 MTKKRRNGGRNKSGRGHVTFVRCSNCSRCVAKDKAIKRFTVRNMVESAAIRDISDASVYP 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y +PKLY K+ YCVSCAIHS VVR RS+ RR R PP R
Sbjct: 61 EYAIPKLYIKIAYCVSCAIHSHVVRVRSREGRRNRAPPPR 100
>sp|P41959|RS26_BRUPA 40S ribosomal protein S26 (Fragment) OS=Brugia pahangi PE=3 SV=1
Length = 83
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 72/83 (86%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNC RC PKDKAIKKFV+RNIV AAAVRDI++AS Y
Sbjct: 1 MTTKRRNHGRNKKGRGHVRPIRCTNCGRCAPKDKAIKKFVVRNIVVAAAVRDISDASAYD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKV 83
SY LPKLY KLHYCVSCAIHSKV
Sbjct: 61 SYALPKLYHKLHYCVSCAIHSKV 83
>sp|P49216|RS26_ORYSJ 40S ribosomal protein S26 OS=Oryza sativa subsp. japonica
GN=RPS26 PE=2 SV=2
Length = 133
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 72/85 (84%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRNGGR+KHGRGHV +RC+NCA+C PKDKAIK+F +RNIVE AA+RD+ EA +
Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVR 85
Y LPKLYAK+H+CVSCAIH+ +VR
Sbjct: 61 GYVLPKLYAKVHHCVSCAIHAHIVR 85
>sp|Q54TL8|RS26_DICDI 40S ribosomal protein S26 OS=Dictyostelium discoideum GN=rps26 PE=3
SV=1
Length = 112
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 78/102 (76%), Gaps = 2/102 (1%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYY- 59
MT KRRN GRSKHGRG V +RCTNCARCVPKDKA+K+F IR IVE AAV+DI++ +
Sbjct: 1 MTQKRRNHGRSKHGRGSVPYIRCTNCARCVPKDKAVKRFYIRPIVENAAVKDISDQGVFN 60
Query: 60 -QSYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
+ Y+ P+ Y K YC+SCAIHS +VR RS +DR+IRT P R
Sbjct: 61 VKGYKFPRTYVKSQYCISCAIHSHIVRVRSVADRKIRTRPSR 102
>sp|Q9BHU1|RS26_OXYNO 40S ribosomal protein S26 OS=Oxytricha nova GN=RPS26 PE=3 SV=1
Length = 125
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEA-SYY 59
M KRRN GR+K +GH + VRCTNC R V KDKAIK+F RN+V+A++ RDI E +Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 60 QS-YQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIR 95
QS + +PK+Y KL YCVSCAIH+++VR RS DRR R
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHR 97
>sp|Q8SRN2|RS26_ENCCU 40S ribosomal protein S26 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS26 PE=1 SV=1
Length = 105
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 60/91 (65%)
Query: 5 RRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQSYQL 64
RRN GR K RG ++C C PKDKAIK+F I++++E A+ D+ +A+ Y +++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 65 PKLYAKLHYCVSCAIHSKVVRNRSKSDRRIR 95
P++ K +CVSCA H+K+VR RS R+IR
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>sp|P41692|RS26_MUSVI 40S ribosomal protein S26 (Fragment) OS=Mustela vison GN=RPS26
PE=3 SV=3
Length = 41
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 35/40 (87%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFV 40
MT KRRN GR+K GRGHV P+RCTN ARCVPKDKAIKKFV
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNLARCVPKDKAIKKFV 40
>sp|P18732|ZG64_XENLA Gastrula zinc finger protein XlCGF64.1 (Fragment) OS=Xenopus
laevis PE=3 SV=1
Length = 196
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 13 HGRGHVN--PVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQSYQL 64
H RGH P CT C +C + KA+++ + E V E + + QL
Sbjct: 24 HQRGHTEEKPFMCTQCGKCFRQKKALRRHQFIHTGEKPYVCTECEKRFLEKSQL 77
>sp|Q8NCN2|ZBT34_HUMAN Zinc finger and BTB domain-containing protein 34 OS=Homo sapiens
GN=ZBTB34 PE=2 SV=4
Length = 500
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 13 HGRGHVN--PVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEA 56
H RGH + P RC C +C P + + + +N A VR E+
Sbjct: 418 HIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVAEVRSRIES 463
>sp|Q2FQQ2|CAS1D_METHJ CRISPR-associated endonuclease Cas1 4 OS=Methanospirillum hungatei
(strain JF-1 / DSM 864) GN=cas1-4 PE=3 SV=1
Length = 347
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 81 SKVVRNRSKSDRRIRTPPQRNFPRSVSLTEGTVTAMVLSSQNQREKEDRIGESHL 135
S + + +SD+R R PP+ +SLT V V+S+ Q + IG H+
Sbjct: 188 SSSLPDEWRSDKRTRRPPRDELNALLSLTYTMVNTEVISALRQYNLDPFIGVMHV 242
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.132 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,311,389
Number of Sequences: 539616
Number of extensions: 1635965
Number of successful extensions: 3413
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3382
Number of HSP's gapped (non-prelim): 34
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)