Your job contains 1 sequence.
>psy11384
MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ
SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFPRSVSLTEGTVTAMVLSS
QNQREKEDRIGESHLFK
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11384
(137 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0261597 - symbol:RpS26 "Ribosomal protein S26" spe... 480 1.0e-45 1
ZFIN|ZDB-GENE-030131-8606 - symbol:rps26 "ribosomal prote... 437 3.6e-41 1
ZFIN|ZDB-GENE-040426-1706 - symbol:rps26l "ribosomal prot... 437 3.6e-41 1
UNIPROTKB|J9P4R8 - symbol:RPS26 "Uncharacterized protein"... 435 5.9e-41 1
UNIPROTKB|Q56JV1 - symbol:RPS26 "40S ribosomal protein S2... 434 7.5e-41 1
UNIPROTKB|P62854 - symbol:RPS26 "40S ribosomal protein S2... 434 7.5e-41 1
UNIPROTKB|P49171 - symbol:RPS26 "40S ribosomal protein S2... 434 7.5e-41 1
RGD|621044 - symbol:Rps26 "ribosomal protein S26" species... 434 7.5e-41 1
UNIPROTKB|F8VZW7 - symbol:LOC100996747 "Protein LOC100996... 430 2.0e-40 1
UNIPROTKB|F1MB60 - symbol:RPS26 "40S ribosomal protein S2... 429 2.6e-40 1
UNIPROTKB|F1SPH5 - symbol:LOC100625477 "Uncharacterized p... 429 2.6e-40 1
UNIPROTKB|G3N0E2 - symbol:G3N0E2 "Uncharacterized protein... 427 4.2e-40 1
RGD|2319323 - symbol:LOC100361854 "ribosomal protein S26-... 426 5.3e-40 1
RGD|2319518 - symbol:LOC100361756 "ribosomal protein S26-... 421 1.8e-39 1
TAIR|locus:2061883 - symbol:AT2G40510 species:3702 "Arabi... 415 7.8e-39 1
TAIR|locus:2061928 - symbol:AT2G40590 species:3702 "Arabi... 415 7.8e-39 1
TAIR|locus:2078491 - symbol:AT3G56340 species:3702 "Arabi... 409 3.4e-38 1
UNIPROTKB|Q5JNZ5 - symbol:RPS26P11 "Putative 40S ribosoma... 401 2.4e-37 1
CGD|CAL0004688 - symbol:RPS26A species:5476 "Candida albi... 399 3.9e-37 1
RGD|1582959 - symbol:LOC688948 "similar to ribosomal prot... 398 4.9e-37 1
WB|WBGene00004495 - symbol:rps-26 species:6239 "Caenorhab... 394 1.3e-36 1
POMBASE|SPAC1805.11c - symbol:rps2602 "40S ribosomal prot... 384 1.5e-35 1
RGD|1586381 - symbol:LOC689919 "similar to 40S ribosomal ... 378 6.5e-35 1
ASPGD|ASPL0000029491 - symbol:AN5715 species:162425 "Emer... 374 1.7e-34 1
RGD|1562415 - symbol:RGD1562415 "similar to 40S ribosomal... 373 2.2e-34 1
POMBASE|SPAC806.03c - symbol:rps2601 "40S ribosomal prote... 370 4.6e-34 1
SGD|S000003157 - symbol:RPS26A "Protein component of the ... 370 4.6e-34 1
SGD|S000000933 - symbol:RPS26B "Protein component of the ... 370 4.6e-34 1
RGD|1559808 - symbol:RGD1559808 "similar to 40S ribosomal... 368 7.4e-34 1
GENEDB_PFALCIPARUM|PFB0830w - symbol:PFB0830w "Ribosomal ... 367 9.5e-34 1
UNIPROTKB|O96258 - symbol:PFB0830w "40S ribosomal protein... 367 9.5e-34 1
UNIPROTKB|J9NX11 - symbol:J9NX11 "Uncharacterized protein... 344 2.6e-31 1
RGD|1565117 - symbol:RGD1565117 "similar to 40S ribosomal... 340 6.9e-31 1
DICTYBASE|DDB_G0281677 - symbol:rps26 "40S ribosomal prot... 337 1.4e-30 1
UNIPROTKB|F1RFS4 - symbol:F1RFS4 "Uncharacterized protein... 333 3.8e-30 1
UNIPROTKB|I3L5L2 - symbol:RPS26 "40S ribosomal protein S2... 317 1.9e-28 1
UNIPROTKB|G3N0G0 - symbol:G3N0G0 "Uncharacterized protein... 294 5.2e-26 1
UNIPROTKB|I3L8W3 - symbol:I3L8W3 "Uncharacterized protein... 293 6.6e-26 1
UNIPROTKB|F1M2V6 - symbol:F1M2V6 "Uncharacterized protein... 276 4.2e-24 1
UNIPROTKB|D4ADZ4 - symbol:D4ADZ4 "Uncharacterized protein... 275 5.3e-24 1
UNIPROTKB|F1M5Y5 - symbol:F1M5Y5 "Uncharacterized protein... 244 1.0e-20 1
>FB|FBgn0261597 [details] [associations]
symbol:RpS26 "Ribosomal protein S26" species:7227 "Drosophila
melanogaster" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;NAS] [GO:0005840
"ribosome" evidence=NAS] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 EMBL:AE014134 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG4830 KO:K02976 PANTHER:PTHR12538
OMA:SKHGRGH GeneTree:ENSGT00390000002517 CTD:6231 EMBL:X13625
EMBL:X14247 EMBL:AY069761 EMBL:BT072894 PIR:S03724
RefSeq:NP_523595.1 RefSeq:NP_724109.1 RefSeq:NP_724110.1
UniGene:Dm.6957 ProteinModelPortal:P13008 SMR:P13008 DIP:DIP-17487N
IntAct:P13008 MINT:MINT-297533 STRING:P13008 PaxDb:P13008
PRIDE:P13008 EnsemblMetazoa:FBtr0081089 EnsemblMetazoa:FBtr0081090
EnsemblMetazoa:FBtr0081091 EnsemblMetazoa:FBtr0331455 GeneID:35098
KEGG:dme:Dmel_CG10305 FlyBase:FBgn0261597 InParanoid:P13008
OrthoDB:EOG4G1K01 PhylomeDB:P13008 ChiTaRS:RPS26 GenomeRNAi:35098
NextBio:791848 Bgee:P13008 GermOnline:CG10305 Uniprot:P13008
Length = 114
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 90/107 (84%), Positives = 97/107 (90%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRNGGR+KH RGHV PVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEAS +
Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFPRSVS 107
SY LPKLYAKLHYCVSCAIHSKVVRNRS+ RRIRTPP R+FP+ ++
Sbjct: 61 SYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSFPKDMA 107
>ZFIN|ZDB-GENE-030131-8606 [details] [associations]
symbol:rps26 "ribosomal protein S26" species:7955
"Danio rerio" [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733
ZFIN:ZDB-GENE-030131-8606 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR12538 GeneTree:ENSGT00390000002517 EMBL:CR352210
IPI:IPI00996558 Ensembl:ENSDART00000128833 ArrayExpress:F1QP94
Bgee:F1QP94 Uniprot:F1QP94
Length = 119
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 83/103 (80%), Positives = 89/103 (86%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
SY LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R P
Sbjct: 61 SYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRP 103
>ZFIN|ZDB-GENE-040426-1706 [details] [associations]
symbol:rps26l "ribosomal protein S26, like"
species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733
ZFIN:ZDB-GENE-040426-1706 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG4830 HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538
HOVERGEN:HBG079147 OrthoDB:EOG4JWVG2 EMBL:BC059532 IPI:IPI00481430
RefSeq:NP_957036.1 UniGene:Dr.76736 STRING:Q6PBZ2 PRIDE:Q6PBZ2
GeneID:393715 KEGG:dre:393715 CTD:393715 InParanoid:Q6PBZ2
NextBio:20814717 ArrayExpress:Q6PBZ2 Bgee:Q6PBZ2 Uniprot:Q6PBZ2
Length = 115
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 83/103 (80%), Positives = 89/103 (86%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
SY LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R P
Sbjct: 61 SYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRP 103
>UNIPROTKB|J9P4R8 [details] [associations]
symbol:RPS26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR12538 OMA:SKHGRGH
GeneTree:ENSGT00390000002517 EMBL:AAEX03006917
Ensembl:ENSCAFT00000049430 Uniprot:J9P4R8
Length = 121
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 84/107 (78%), Positives = 92/107 (85%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFPRSVS 107
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R F +VS
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPR-FRPAVS 106
>UNIPROTKB|Q56JV1 [details] [associations]
symbol:RPS26 "40S ribosomal protein S26" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG4830 HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538
HOVERGEN:HBG079147 EMBL:AY911381 EMBL:BC113281 IPI:IPI00694688
RefSeq:NP_001015561.1 UniGene:Bt.2934 ProteinModelPortal:Q56JV1
SMR:Q56JV1 STRING:Q56JV1 PRIDE:Q56JV1 GeneID:509426 KEGG:bta:509426
CTD:6231 InParanoid:Q56JV1 OrthoDB:EOG4JWVG2 NextBio:20868963
Uniprot:Q56JV1
Length = 115
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 82/103 (79%), Positives = 89/103 (86%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R P
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRP 103
>UNIPROTKB|P62854 [details] [associations]
symbol:RPS26 "40S ribosomal protein S26" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0006412 "translation" evidence=IC;TAS]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0015935 "small
ribosomal subunit" evidence=IDA] [GO:0033119 "negative regulation
of RNA splicing" evidence=IDA] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 Reactome:REACT_116125 GO:GO:0000184
GO:GO:0006413 GO:GO:0003729 GO:GO:0003735 GO:GO:0033119
GO:GO:0006415 GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0019083 Orphanet:124 eggNOG:COG4830
HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538 OMA:SKHGRGH
HOVERGEN:HBG079147 CTD:6231 OrthoDB:EOG4JWVG2 EMBL:X69654
EMBL:X77770 EMBL:X79236 EMBL:U41448 EMBL:BC002604 EMBL:BC015832
EMBL:BC070220 EMBL:BC105276 EMBL:BC105798 IPI:IPI00655650
PIR:S55545 PIR:T50824 RefSeq:NP_001020.2 UniGene:Hs.447562
UniGene:Hs.567235 UniGene:Hs.711461 ProteinModelPortal:P62854
SMR:P62854 IntAct:P62854 STRING:P62854 PhosphoSite:P62854
DMDM:51338650 PaxDb:P62854 PRIDE:P62854 DNASU:6231
Ensembl:ENST00000356464 Ensembl:ENST00000552361 GeneID:6231
KEGG:hsa:6231 UCSC:uc001sjf.3 GeneCards:GC12P056438
H-InvDB:HIX0161895 HGNC:HGNC:10414 HPA:HPA043961 MIM:603701
MIM:613309 neXtProt:NX_P62854 PharmGKB:PA34818 InParanoid:P62854
PhylomeDB:P62854 GenomeRNAi:6231 NextBio:24189 ArrayExpress:P62854
Bgee:P62854 CleanEx:HS_RPS26 Genevestigator:P62854
GermOnline:ENSG00000196656 GermOnline:ENSG00000197728
Uniprot:P62854
Length = 115
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 82/103 (79%), Positives = 89/103 (86%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R P
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRP 103
>UNIPROTKB|P49171 [details] [associations]
symbol:RPS26 "40S ribosomal protein S26" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG4830 HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538
HOVERGEN:HBG079147 CTD:6231 OrthoDB:EOG4JWVG2 EMBL:F14491
EMBL:DQ629173 RefSeq:NP_001090950.1 UniGene:Ssc.945
ProteinModelPortal:P49171 SMR:P49171 STRING:P49171 PRIDE:P49171
GeneID:100037997 KEGG:ssc:100037997 Uniprot:P49171
Length = 115
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 82/103 (79%), Positives = 89/103 (86%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R P
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRP 103
>RGD|621044 [details] [associations]
symbol:Rps26 "ribosomal protein S26" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015935 "small ribosomal subunit" evidence=ISO] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO;IDA] [GO:0033119
"negative regulation of RNA splicing" evidence=ISO]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 RGD:621044
GO:GO:0006412 GO:GO:0003735 GO:GO:0022627 eggNOG:COG4830
HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538
GeneTree:ENSGT00390000002517 HOVERGEN:HBG079147 CTD:6231
OrthoDB:EOG4JWVG2 EMBL:X02414 EMBL:BC061561 IPI:IPI00551657
PIR:A02753 RefSeq:NP_037356.1 RefSeq:XP_002728047.1
RefSeq:XP_003752685.1 UniGene:Rn.135639 UniGene:Rn.203156
ProteinModelPortal:P62856 SMR:P62856 STRING:P62856 PRIDE:P62856
Ensembl:ENSRNOT00000007304 GeneID:100360508 GeneID:27139
KEGG:rno:100360508 KEGG:rno:27139 UCSC:RGD:621044 InParanoid:P62856
NextBio:608057 Genevestigator:P62856 GermOnline:ENSRNOG00000005517
Uniprot:P62856
Length = 115
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 82/103 (79%), Positives = 89/103 (86%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R P
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRP 103
>UNIPROTKB|F8VZW7 [details] [associations]
symbol:LOC100996747 "Protein LOC100996747" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC225613 PANTHER:PTHR12538 IPI:IPI01022997
RefSeq:XP_003846586.1 ProteinModelPortal:F8VZW7 SMR:F8VZW7
Ensembl:ENST00000547899 GeneID:100996747 KEGG:hsa:100996747
ArrayExpress:F8VZW7 Uniprot:F8VZW7
Length = 115
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 81/103 (78%), Positives = 88/103 (85%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+E S +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R P
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRP 103
>UNIPROTKB|F1MB60 [details] [associations]
symbol:RPS26 "40S ribosomal protein S26" species:9913 "Bos
taurus" [GO:0033119 "negative regulation of RNA splicing"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR12538 OMA:SKHGRGH GeneTree:ENSGT00390000002517
IPI:IPI00694688 EMBL:DAAA02013535 Ensembl:ENSBTAT00000054840
Uniprot:F1MB60
Length = 115
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 81/102 (79%), Positives = 88/102 (86%)
Query: 2 TCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQS 61
T KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS + +
Sbjct: 2 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDA 61
Query: 62 YQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R P
Sbjct: 62 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRP 103
>UNIPROTKB|F1SPH5 [details] [associations]
symbol:LOC100625477 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0033119 "negative regulation of RNA splicing"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR12538 OMA:SKHGRGH GeneTree:ENSGT00390000002517
EMBL:CU457395 Ensembl:ENSSSCT00000000399 Uniprot:F1SPH5
Length = 116
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 81/102 (79%), Positives = 88/102 (86%)
Query: 2 TCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQS 61
T KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS + +
Sbjct: 3 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDA 62
Query: 62 YQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R P
Sbjct: 63 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRP 104
>UNIPROTKB|G3N0E2 [details] [associations]
symbol:G3N0E2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR12538 OMA:SCAIHST GeneTree:ENSGT00390000002517
EMBL:DAAA02073248 Ensembl:ENSBTAT00000064544 NextBio:20927036
Uniprot:G3N0E2
Length = 115
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 79/103 (76%), Positives = 88/103 (85%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFV RNI+EAAA+RDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVTRNIIEAAAIRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R P
Sbjct: 61 TYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRP 103
>RGD|2319323 [details] [associations]
symbol:LOC100361854 "ribosomal protein S26-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 RGD:2319323 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538 OMA:KAICVTR
GeneTree:ENSGT00390000002517 OrthoDB:EOG4JWVG2 IPI:IPI00213366
RefSeq:XP_002730256.1 RefSeq:XP_003754880.1 PRIDE:D3Z8D7
Ensembl:ENSRNOT00000051134 GeneID:100361854 KEGG:rno:100361854
Uniprot:D3Z8D7
Length = 115
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 81/103 (78%), Positives = 88/103 (85%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRG V P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS +
Sbjct: 1 MTKKRRNNGRAKKGRGQVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R P
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRP 103
>RGD|2319518 [details] [associations]
symbol:LOC100361756 "ribosomal protein S26-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 RGD:2319518 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 OMA:IRANPNS PANTHER:PTHR12538
IPI:IPI00777091 Ensembl:ENSRNOT00000057635 Uniprot:F1M6H7
Length = 114
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 79/100 (79%), Positives = 86/100 (86%)
Query: 4 KRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQSYQ 63
KRRN GR+K GRGH P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS + +Y
Sbjct: 3 KRRNNGRAKKGRGHEQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYV 62
Query: 64 LPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
LPKLY KLHYCVSCAIHSKVVRNRS+ R+ RTPP R P
Sbjct: 63 LPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRP 102
>TAIR|locus:2061883 [details] [associations]
symbol:AT2G40510 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 GO:GO:0009506
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
GO:GO:0003735 EMBL:AC002336 GO:GO:0022627 eggNOG:COG4830
HOGENOM:HOG000108824 KO:K02976 ProtClustDB:PLN00186
PANTHER:PTHR12538 EMBL:AY099673 EMBL:BT020291 EMBL:BT026422
EMBL:AY086823 IPI:IPI00522785 PIR:D84830 RefSeq:NP_181583.1
UniGene:At.23445 ProteinModelPortal:Q8LPJ7 SMR:Q8LPJ7 STRING:Q8LPJ7
PaxDb:Q8LPJ7 PRIDE:Q8LPJ7 EnsemblPlants:AT2G40510.1 GeneID:818646
KEGG:ath:AT2G40510 TAIR:At2g40510 InParanoid:Q8LPJ7 OMA:SCAIHST
PhylomeDB:Q8LPJ7 Genevestigator:Q8LPJ7 GermOnline:AT2G40510
Uniprot:Q8LPJ7
Length = 133
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 74/104 (71%), Positives = 88/104 (84%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRNGGR+KH RGHVNP+RC+NC +C PKDKAIK+F++RNIVE AA+RD+ EAS Y+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFPR 104
Y LPKLYAK YCVSCAIHS VVR RS+++RR+RTPP R F R
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPR-FAR 103
>TAIR|locus:2061928 [details] [associations]
symbol:AT2G40590 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0003735 EMBL:AC002336
GO:GO:0022627 EMBL:AY127000 EMBL:BT001026 EMBL:Z18167
IPI:IPI00525445 PIR:D84831 RefSeq:NP_181591.1 UniGene:At.48573
ProteinModelPortal:P49206 SMR:P49206 IntAct:P49206 STRING:P49206
PaxDb:P49206 PRIDE:P49206 EnsemblPlants:AT2G40590.1 GeneID:818654
KEGG:ath:AT2G40590 TAIR:At2g40590 eggNOG:COG4830
HOGENOM:HOG000108824 InParanoid:P49206 KO:K02976 OMA:IRANPNS
PhylomeDB:P49206 ProtClustDB:PLN00186 Genevestigator:P49206
GermOnline:AT2G40590 PANTHER:PTHR12538 Uniprot:P49206
Length = 131
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 74/104 (71%), Positives = 88/104 (84%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRNGGR+KH RGHVNP+RC+NC +C PKDKAIK+F++RNIVE AA+RD+ EAS Y+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFPR 104
Y LPKLYAK YCVSCAIHS VVR RS+++RR+RTPP R F R
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPR-FTR 103
>TAIR|locus:2078491 [details] [associations]
symbol:AT3G56340 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009664 "plant-type cell wall organization"
evidence=RCA] [GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0003735
EMBL:AL163763 GO:GO:0022627 eggNOG:COG4830 HOGENOM:HOG000108824
KO:K02976 ProtClustDB:PLN00186 PANTHER:PTHR12538 EMBL:AY039886
EMBL:AY133664 IPI:IPI00546882 PIR:T47751 RefSeq:NP_191193.1
UniGene:At.5076 ProteinModelPortal:Q9LYK9 SMR:Q9LYK9 STRING:Q9LYK9
PaxDb:Q9LYK9 PRIDE:Q9LYK9 EnsemblPlants:AT3G56340.1 GeneID:824801
KEGG:ath:AT3G56340 TAIR:At3g56340 InParanoid:Q9LYK9 OMA:SKHGRGH
PhylomeDB:Q9LYK9 Genevestigator:Q9LYK9 GermOnline:AT3G56340
Uniprot:Q9LYK9
Length = 130
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 73/104 (70%), Positives = 87/104 (83%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRNGGR+KH RGHV P+RC+NC +C PKDKAIK+F++RNIVE AA+RD+ EAS Y+
Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFPR 104
Y LPKLYAK YCVSCAIHS VVR RS+++RR+RTPP R F R
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPR-FAR 103
>UNIPROTKB|Q5JNZ5 [details] [associations]
symbol:RPS26P11 "Putative 40S ribosomal protein S26-like 1"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG4830 PANTHER:PTHR12538 EMBL:AL929401
IPI:IPI00187140 UniGene:Hs.449523 ProteinModelPortal:Q5JNZ5
SMR:Q5JNZ5 STRING:Q5JNZ5 DMDM:74741611 PaxDb:Q5JNZ5 PRIDE:Q5JNZ5
GeneCards:GC0XP071181 HGNC:HGNC:31817 neXtProt:NX_Q5JNZ5
HOVERGEN:HBG079147 InParanoid:Q5JNZ5 PhylomeDB:Q5JNZ5
Genevestigator:Q5JNZ5 Uniprot:Q5JNZ5
Length = 115
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 76/103 (73%), Positives = 83/103 (80%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN +K GRGHV P+RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI+E S +
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
+Y LPKLY KLHYCVSCAIHSKVVRNRS+ + RTPP R P
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPPPRFRP 103
>CGD|CAL0004688 [details] [associations]
symbol:RPS26A species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0006407 "rRNA export from nucleus"
evidence=IEA] InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733
CGD:CAL0004688 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000008 EMBL:AACQ01000007 eggNOG:COG4830
HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538 RefSeq:XP_722381.1
RefSeq:XP_722520.1 STRING:Q5ALV6 GeneID:3635787 GeneID:3635985
KEGG:cal:CaO19.1470 KEGG:cal:CaO19.9045 Uniprot:Q5ALV6
Length = 119
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 73/100 (73%), Positives = 85/100 (85%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
M KR + GR+K GRGHV PVRC NCARCVPKDKAIK+ IRN+VEAAAVRD++EAS Y
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCLNCARCVPKDKAIKRVTIRNMVEAAAVRDLSEASVYA 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y LPKLY KLHYCVSCAIH+++VR RS++DR+IRTPPQR
Sbjct: 61 EYALPKLYNKLHYCVSCAIHARIVRVRSRTDRKIRTPPQR 100
>RGD|1582959 [details] [associations]
symbol:LOC688948 "similar to ribosomal protein S26"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 RGD:1582959
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
OrthoDB:EOG4JWVG2 IPI:IPI00394551 RefSeq:XP_001066146.1
RefSeq:XP_002726626.1 Ensembl:ENSRNOT00000041748 GeneID:688948
KEGG:rno:688948 UCSC:RGD:1582959 NextBio:737590 Uniprot:D4AAJ9
Length = 115
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 77/103 (74%), Positives = 83/103 (80%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN G +K G HV P+ CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EA +
Sbjct: 1 MTKKRRNNGCAKKGHSHVQPICCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEAGVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
+Y LPKLY KLHYCVSCAIHSKVVRNRS R+ RTPP R P
Sbjct: 61 TYVLPKLYVKLHYCVSCAIHSKVVRNRSCEARKDRTPPPRFRP 103
>WB|WBGene00004495 [details] [associations]
symbol:rps-26 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0006915 GO:GO:0002119
GO:GO:0006412 GO:GO:0010171 GO:GO:0040011 GO:GO:0000003
GO:GO:0005840 GO:GO:0003735 EMBL:Z92834 eggNOG:COG4830
HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538 OMA:SKHGRGH
GeneTree:ENSGT00390000002517 PIR:T21988 RefSeq:NP_493571.1
ProteinModelPortal:O45499 SMR:O45499 STRING:O45499 PaxDb:O45499
PRIDE:O45499 EnsemblMetazoa:F39B2.6.1 EnsemblMetazoa:F39B2.6.2
GeneID:173342 KEGG:cel:CELE_F39B2.6 UCSC:F39B2.6.1 CTD:173342
WormBase:F39B2.6 InParanoid:O45499 NextBio:879249 Uniprot:O45499
Length = 117
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 76/111 (68%), Positives = 85/111 (76%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K RGHV +RCTNC RC PKDKAIKKFV+RNIVEAAAVRDI +AS Y
Sbjct: 1 MTFKRRNHGRNKKNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYT 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFPRSVSLTEG 111
Y LPKLY KLHYC++CAIHSKVVRNRS+ RR R PP R R+ + G
Sbjct: 61 QYALPKLYHKLHYCIACAIHSKVVRNRSREARRDRNPPPRFGQRAAAARPG 111
>POMBASE|SPAC1805.11c [details] [associations]
symbol:rps2602 "40S ribosomal protein S26 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 PomBase:SPAC1805.11c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0022627 eggNOG:COG4830 HOGENOM:HOG000108824 KO:K02976
PANTHER:PTHR12538 OMA:SKHGRGH OrthoDB:EOG4T1MX3 EMBL:AB029514
PIR:T37896 PIR:T43515 RefSeq:NP_593922.1 STRING:Q9UTG4 PRIDE:Q9UTG4
EnsemblFungi:SPAC1805.11c.1 GeneID:2542538 KEGG:spo:SPAC1805.11c
NextBio:20803590 Uniprot:Q9UTG4
Length = 119
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 71/100 (71%), Positives = 82/100 (82%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+KHGRGHV VRC NC+R VPKDKAIK++ IRN+VE AA+RD++EAS Y
Sbjct: 1 MTQKRRNNGRNKHGRGHVKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYS 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y +PKLY KL YCVSCAIHS+VVR RS+ RRIRTPP R
Sbjct: 61 EYTIPKLYIKLQYCVSCAIHSRVVRVRSREGRRIRTPPPR 100
>RGD|1586381 [details] [associations]
symbol:LOC689919 "similar to 40S ribosomal protein S26"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 RGD:1586381
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
IPI:IPI00565233 Ensembl:ENSRNOT00000061643 Uniprot:F1LYT3
Length = 115
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 72/102 (70%), Positives = 82/102 (80%)
Query: 2 TCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQS 61
T K+RN GR+K G GHV P+RCTNCARCVPKDKAIK FVIRNI+EAAAVR I+EA+ + +
Sbjct: 2 TKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDA 61
Query: 62 YQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
Y PKLY KLHYCVSCAIHSKVV NRS R+ +TPP R P
Sbjct: 62 YVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRP 103
>ASPGD|ASPL0000029491 [details] [associations]
symbol:AN5715 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006407 "rRNA export from nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840 EMBL:AACD01000098
EMBL:BN001305 GO:GO:0003735 eggNOG:COG4830 HOGENOM:HOG000108824
KO:K02976 PANTHER:PTHR12538 OMA:SKHGRGH OrthoDB:EOG4T1MX3
RefSeq:XP_663319.1 STRING:Q5B165 EnsemblFungi:CADANIAT00003347
GeneID:2872004 KEGG:ani:AN5715.2 Uniprot:Q5B165
Length = 119
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 67/100 (67%), Positives = 81/100 (81%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
M KR N GR+K+GRGHV PVRC+NCARCVPKDKAIK+F IRN+VE+AA+RDI++AS +
Sbjct: 1 MVKKRANNGRNKNGRGHVKPVRCSNCARCVPKDKAIKRFTIRNMVESAAIRDISDASVFA 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y +PK+Y KL YCVSCAIH K+VR RS+ RR R PP R
Sbjct: 61 DYAVPKMYLKLQYCVSCAIHGKIVRVRSREGRRNRAPPPR 100
>RGD|1562415 [details] [associations]
symbol:RGD1562415 "similar to 40S ribosomal protein S26"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 RGD:1562415
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
IPI:IPI00362101 Ensembl:ENSRNOT00000042292 Uniprot:F1M3V7
Length = 115
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 73/100 (73%), Positives = 79/100 (79%)
Query: 4 KRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQSYQ 63
K RN G +K G HV P+RCTNC RCVPKDKAIKKFVIRNIVEAAAVRDI+EAS + +Y
Sbjct: 4 KWRNKGCAKKGPSHVQPIRCTNCTRCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYV 63
Query: 64 LPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
LPKLY KLHYCVSCAIHSKVVRN S R+ TPP R P
Sbjct: 64 LPKLYVKLHYCVSCAIHSKVVRNPSCEARKDGTPPPRFRP 103
>POMBASE|SPAC806.03c [details] [associations]
symbol:rps2601 "40S ribosomal protein S26 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR000892 Pfam:PF01283
PROSITE:PS00733 PomBase:SPAC806.03c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0042254 GO:GO:0003735 GO:GO:0002181
GO:GO:0022627 HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538
PIR:T39095 RefSeq:NP_592853.1 STRING:Q9UT56 PRIDE:Q9UT56
EnsemblFungi:SPAC806.03c.1 GeneID:2543085 KEGG:spo:SPAC806.03c
OMA:KAICVTR OrthoDB:EOG4T1MX3 NextBio:20804113 Uniprot:Q9UT56
Length = 120
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 68/100 (68%), Positives = 81/100 (81%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+KHGRGH VRC NC+R VPKDKAIK++ IRN+VE AA+RD++EAS Y
Sbjct: 1 MTQKRRNCGRNKHGRGHTKFVRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYS 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
Y +PK+Y KL YCVSCAIH++VVR RS+ RRIRTPP R
Sbjct: 61 EYAIPKIYVKLQYCVSCAIHARVVRVRSREGRRIRTPPPR 100
>SGD|S000003157 [details] [associations]
symbol:RPS26A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;NAS] [GO:0005622
"intracellular" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006407 "rRNA export from nucleus" evidence=IGI] [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 SGD:S000003157
EMBL:X91489 EMBL:BK006941 GO:GO:0003735 GO:GO:0002181 GO:GO:0022627
PDB:3U5C PDB:3U5G PDBsum:3U5C PDBsum:3U5G GO:GO:0006407
HOGENOM:HOG000108824 KO:K02976 PANTHER:PTHR12538 OMA:KAICVTR
OrthoDB:EOG4T1MX3 EMBL:U10563 EMBL:Z72711 EMBL:EF123138 PIR:S47942
RefSeq:NP_011326.1 ProteinModelPortal:P39938 SMR:P39938
DIP:DIP-1396N IntAct:P39938 MINT:MINT-383624 STRING:P39938
PeptideAtlas:P39938 PRIDE:P39938 EnsemblFungi:YGL189C GeneID:852686
KEGG:sce:YGL189C CYGD:YGL189c GeneTree:ENSGT00390000002517
NextBio:972011 Genevestigator:P39938 GermOnline:YGL189C
Uniprot:P39938
Length = 119
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 69/104 (66%), Positives = 82/104 (78%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
M KR + GR+K GRGHV PVRC NC++ +PKDKAIK+ IRNIVEAAAVRD++EAS Y
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFPR 104
Y LPK Y KLHYCVSCAIH+++VR RS+ DR+ R PPQR PR
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQR--PR 102
>SGD|S000000933 [details] [associations]
symbol:RPS26B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005840
"ribosome" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006407 "rRNA export from
nucleus" evidence=IGI] [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 SGD:S000000933
EMBL:BK006939 GO:GO:0003735 GO:GO:0002181 EMBL:U18916 GO:GO:0022627
GO:GO:0006407 eggNOG:COG4830 HOGENOM:HOG000108824 KO:K02976
PANTHER:PTHR12538 OMA:SKHGRGH OrthoDB:EOG4T1MX3
GeneTree:ENSGT00390000002517 EMBL:AY692782 EMBL:EF123142 PIR:S50634
RefSeq:NP_011057.1 ProteinModelPortal:P39939 SMR:P39939
DIP:DIP-1395N IntAct:P39939 MINT:MINT-383586 STRING:P39939
PaxDb:P39939 PRIDE:P39939 EnsemblFungi:YER131W GeneID:856868
KEGG:sce:YER131W CYGD:YER131w NextBio:983234 Genevestigator:P39939
GermOnline:YER131W Uniprot:P39939
Length = 119
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 69/104 (66%), Positives = 82/104 (78%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
M KR + GR+K GRGHV PVRC NC++ +PKDKAIK+ IRNIVEAAAVRD++EAS Y
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFPR 104
Y LPK Y KLHYCVSCAIH+++VR RS+ DR+ R PPQR PR
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQR--PR 102
>RGD|1559808 [details] [associations]
symbol:RGD1559808 "similar to 40S ribosomal protein S26"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 RGD:1559808 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538 OrthoDB:EOG4JWVG2
IPI:IPI00193949 RefSeq:XP_001065275.1 RefSeq:XP_236845.1
PRIDE:D4AEB9 Ensembl:ENSRNOT00000045419 GeneID:316158
KEGG:rno:316158 UCSC:RGD:1559808 CTD:316158 NextBio:670501
Uniprot:D4AEB9
Length = 115
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 71/103 (68%), Positives = 80/103 (77%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KRRN GR+K GRGHV P+ C NC+ CVPKDKAIKKFVI NIVE AAVRDI+EA +
Sbjct: 1 MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
+Y LPKLY KLHYCVS AIHSKV+RN+S R+ RT P R P
Sbjct: 61 AYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRP 103
>GENEDB_PFALCIPARUM|PFB0830w [details] [associations]
symbol:PFB0830w "Ribosomal protein S26e,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 GO:GO:0006412
GO:GO:0003735 EMBL:AE001362 GO:GO:0022627 HOGENOM:HOG000108824
KO:K02976 PANTHER:PTHR12538 OMA:SKHGRGH ProtClustDB:PTZ00172
PIR:F71604 RefSeq:XP_001349683.1 ProteinModelPortal:O96258
PRIDE:O96258 EnsemblProtists:PFB0830w:mRNA GeneID:812765
KEGG:pfa:PFB0830w EuPathDB:PlasmoDB:PF3D7_0217800 Uniprot:O96258
Length = 107
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 68/95 (71%), Positives = 78/95 (82%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
M KRRNGGRSKH RGHVNP+RC+NC RCVPKDKAIK+F IRNIV+ +A RDI EAS Y
Sbjct: 1 MPKKRRNGGRSKHNRGHVNPLRCSNCGRCVPKDKAIKRFNIRNIVDTSAQRDIKEASVYS 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIR 95
++QLPKLY K YCVSCAIHS+ VR RS+ RR+R
Sbjct: 61 TFQLPKLYIKQCYCVSCAIHSRFVRVRSREQRRVR 95
>UNIPROTKB|O96258 [details] [associations]
symbol:PFB0830w "40S ribosomal protein S26e, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 GO:GO:0006412 GO:GO:0003735
EMBL:AE001362 GO:GO:0022627 HOGENOM:HOG000108824 KO:K02976
PANTHER:PTHR12538 OMA:SKHGRGH ProtClustDB:PTZ00172 PIR:F71604
RefSeq:XP_001349683.1 ProteinModelPortal:O96258 PRIDE:O96258
EnsemblProtists:PFB0830w:mRNA GeneID:812765 KEGG:pfa:PFB0830w
EuPathDB:PlasmoDB:PF3D7_0217800 Uniprot:O96258
Length = 107
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 68/95 (71%), Positives = 78/95 (82%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
M KRRNGGRSKH RGHVNP+RC+NC RCVPKDKAIK+F IRNIV+ +A RDI EAS Y
Sbjct: 1 MPKKRRNGGRSKHNRGHVNPLRCSNCGRCVPKDKAIKRFNIRNIVDTSAQRDIKEASVYS 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIR 95
++QLPKLY K YCVSCAIHS+ VR RS+ RR+R
Sbjct: 61 TFQLPKLYIKQCYCVSCAIHSRFVRVRSREQRRVR 95
>UNIPROTKB|J9NX11 [details] [associations]
symbol:J9NX11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR12538 GeneTree:ENSGT00390000002517 EMBL:AAEX03000630
Ensembl:ENSCAFT00000048299 OMA:ICCTSCA Uniprot:J9NX11
Length = 115
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 67/103 (65%), Positives = 79/103 (76%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KR N G +K G G + P+ CT+CARCVPKDKAIKKFVI NIVEAA RDI++AS +
Sbjct: 1 MTKKRWNNGCAKKGLGQMQPICCTSCARCVPKDKAIKKFVIGNIVEAATSRDISQASVFD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
+Y LPKLY KLHYC+SCAI SKVVRN S+ R+ RTPP + P
Sbjct: 61 AYVLPKLYVKLHYCMSCAIRSKVVRNCSREARKDRTPPPQLRP 103
>RGD|1565117 [details] [associations]
symbol:RGD1565117 "similar to 40S ribosomal protein S26"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733 RGD:1565117
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
GeneTree:ENSGT00390000002517 OrthoDB:EOG4JWVG2 IPI:IPI00208657
RefSeq:XP_001055593.1 RefSeq:XP_235217.1 Ensembl:ENSRNOT00000045687
GeneID:299848 KEGG:rno:299848 UCSC:RGD:1565117 CTD:299848
NextBio:645892 Uniprot:D3ZJ54
Length = 106
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 67/103 (65%), Positives = 78/103 (75%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT KR+N R+K G GHV P+RCTNCA+CVPK F+IRNI+EAAAVRDI+EAS +
Sbjct: 1 MTKKRKNNSRAKKGLGHVQPIRCTNCAQCVPK------FIIRNIIEAAAVRDISEASVFD 54
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
+Y LPKL+ KLHYCVSCAIHSKV RN S+ DR TPP R P
Sbjct: 55 AYVLPKLFVKLHYCVSCAIHSKVTRNPSREDR---TPPPRFRP 94
>DICTYBASE|DDB_G0281677 [details] [associations]
symbol:rps26 "40S ribosomal protein S26"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000892 Pfam:PF01283 PROSITE:PS00733
dictyBase:DDB_G0281677 GenomeReviews:CM000152_GR GO:GO:0006412
GO:GO:0005840 EMBL:AAFI02000042 GO:GO:0003735 eggNOG:COG4830
KO:K02976 PANTHER:PTHR12538 OMA:SKHGRGH RefSeq:XP_640573.1
STRING:Q54TL8 PRIDE:Q54TL8 EnsemblProtists:DDB0231064
GeneID:8623182 KEGG:ddi:DDB_G0281677 ProtClustDB:PTZ00172
Uniprot:Q54TL8
Length = 112
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 64/102 (62%), Positives = 78/102 (76%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYY- 59
MT KRRN GRSKHGRG V +RCTNCARCVPKDKA+K+F IR IVE AAV+DI++ +
Sbjct: 1 MTQKRRNHGRSKHGRGSVPYIRCTNCARCVPKDKAVKRFYIRPIVENAAVKDISDQGVFN 60
Query: 60 -QSYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQR 100
+ Y+ P+ Y K YC+SCAIHS +VR RS +DR+IRT P R
Sbjct: 61 VKGYKFPRTYVKSQYCISCAIHSHIVRVRSVADRKIRTRPSR 102
>UNIPROTKB|F1RFS4 [details] [associations]
symbol:F1RFS4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
GeneTree:ENSGT00390000002517 EMBL:CU466242
Ensembl:ENSSSCT00000003110 Uniprot:F1RFS4
Length = 93
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 60/92 (65%), Positives = 74/92 (80%)
Query: 17 HVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQSYQLPKLYAKLHYCVS 76
H+ P+ CTNCARC+PKDKAI+KF+IRNIVEAAAV I+E S + +Y LPKLYAK HYC S
Sbjct: 1 HMQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCES 60
Query: 77 CAIHSKVVRNRSKSDRRIRTPPQRNFPRSVSL 108
CAIHSKV+RNRS+ +++RTPP R P +L
Sbjct: 61 CAIHSKVIRNRSREAQKVRTPPPRFRPTGAAL 92
>UNIPROTKB|I3L5L2 [details] [associations]
symbol:RPS26 "40S ribosomal protein S26" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
GeneTree:ENSGT00390000002517 Ensembl:ENSSSCT00000026366 OMA:HKDRTPP
Uniprot:I3L5L2
Length = 76
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 59/72 (81%), Positives = 64/72 (88%)
Query: 2 TCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQS 61
T KRRN GR+K GRGHV P+RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EAS + +
Sbjct: 3 TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDA 62
Query: 62 YQLPKLYAKLHY 73
Y LPKLY KLHY
Sbjct: 63 YVLPKLYVKLHY 74
>UNIPROTKB|G3N0G0 [details] [associations]
symbol:G3N0G0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
GO:GO:0006412 GO:GO:0003729 GO:GO:0003735 GO:GO:0033119
GO:GO:0022627 PANTHER:PTHR12538 GeneTree:ENSGT00390000002517
EMBL:DAAA02016539 Ensembl:ENSBTAT00000064945 OMA:MVEATAI
NextBio:20927684 Uniprot:G3N0G0
Length = 114
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 60/103 (58%), Positives = 72/103 (69%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
MT K RN G +K G + P+RCT+CA C+PKDKAIKKF+I N+VEA A+RDI+EAS +
Sbjct: 1 MTKKSRNNG-AKKGHSLMQPIRCTSCACCMPKDKAIKKFIIWNMVEATAIRDISEASVFD 59
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFP 103
++ LPKLY KLHY SCAIHSKVV S RTP R P
Sbjct: 60 AHLLPKLYVKLHYHGSCAIHSKVVSTHSPEAWENRTPAPRFRP 102
>UNIPROTKB|I3L8W3 [details] [associations]
symbol:I3L8W3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000892 Pfam:PF01283
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR12538
GeneTree:ENSGT00390000002517 EMBL:FP236438
Ensembl:ENSSSCT00000025827 Uniprot:I3L8W3
Length = 112
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 55/101 (54%), Positives = 71/101 (70%)
Query: 4 KRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQSYQ 63
K N G +K G GHV P+ TNCA+C+PKDKAI+ FVIRNI EA A+R+I+EA + +
Sbjct: 4 KEWNNGHAKKGHGHVQPIHYTNCAQCMPKDKAIEAFVIRNIAEAVAIRNISEARVFDACV 63
Query: 64 LPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPPQRNFPR 104
P+LY KL+Y VSCAIHS VVRN S ++ RTP + P+
Sbjct: 64 FPELYVKLYYWVSCAIHSNVVRNHSPKAQKDRTPSPQFIPQ 104
>UNIPROTKB|F1M2V6 [details] [associations]
symbol:F1M2V6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR12538 IPI:IPI00777268 Ensembl:ENSRNOT00000059861
Uniprot:F1M2V6
Length = 116
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 55/97 (56%), Positives = 68/97 (70%)
Query: 4 KRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAA--VRDITEASYYQS 61
+RRN G +K G+GHV + C NCA C+ KDKAIK FVI+N VEA A VRDI+EA+ + +
Sbjct: 4 RRRNNGCAKKGQGHVQTIHCMNCAWCMLKDKAIKTFVIQNFVEAIASTVRDISEANIFSA 63
Query: 62 YQLPKLYAKLHYCVSCAIHSKVVRNRSKSDRRIRTPP 98
LPKLY +LHYC SC IHSKV+RN S + PP
Sbjct: 64 SVLPKLYVELHYC-SCVIHSKVIRNSSPKTNQPPPPP 99
>UNIPROTKB|D4ADZ4 [details] [associations]
symbol:D4ADZ4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 PROSITE:PS00733 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR12538 OMA:MVEATAI IPI:IPI00778823
Ensembl:ENSRNOT00000055432 Uniprot:D4ADZ4
Length = 107
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 54/87 (62%), Positives = 66/87 (75%)
Query: 11 SKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQSYQLPKLYAK 70
+K G GHV PV C + A C+PKDKAIK F+I+NI+EAAAVRDI +A+ +++Y LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 71 LHYCVSCAIHSKVVRNRSKSDRRIRTP 97
LHYCVSCAIHS+VVRN RR P
Sbjct: 71 LHYCVSCAIHSEVVRNHLLKLRRTEHP 97
>UNIPROTKB|F1M5Y5 [details] [associations]
symbol:F1M5Y5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000892
Pfam:PF01283 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
IPI:IPI00947677 Ensembl:ENSRNOT00000066259 Uniprot:F1M5Y5
Length = 92
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 52/88 (59%), Positives = 61/88 (69%)
Query: 1 MTCKRRNGGRSKHGRGHVNPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASYYQ 60
+T KRRN R+K G +V P+ NC + +PKDKA KKFV RNIVEAAAVRDI EA+
Sbjct: 1 VTRKRRNHSRAKKGHSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLD 60
Query: 61 SYQLPKLYAKLHYCVSCAIHSKVVRNRS 88
+ LPK Y KL + C IHSKVVRNRS
Sbjct: 61 ANVLPKFYIKL--ALLCEIHSKVVRNRS 86
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.132 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 137 137 0.00091 102 3 11 22 0.39 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 41
No. of states in DFA: 556 (59 KB)
Total size of DFA: 131 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 14.40u 0.08s 14.48t Elapsed: 00:00:39
Total cpu time: 14.40u 0.08s 14.48t Elapsed: 00:00:45
Start: Thu Aug 15 13:07:37 2013 End: Thu Aug 15 13:08:22 2013