BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11388
(90 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AJW|A Chain A, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
pdb|4AJW|B Chain B, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
Length = 934
Score = 114 bits (286), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 66/88 (75%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F CERA+ ILR HG L L LFA+M + GLPELS KD+ YL+++L L TEE+A+KHF
Sbjct: 846 FRGYCERAYTILRRHGLLFLHLFALMRAAGLPELSCSKDIQYLKDSLALGKTEEEALKHF 905
Query: 63 RSKFGEALANSWKTSLNWASHNLAKNNK 90
R KF EAL SWKT +NW +HN++K+N+
Sbjct: 906 RVKFNEALRESWKTKVNWLAHNVSKDNR 933
>pdb|2WXF|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Pik-39.
pdb|2WXG|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw13.
pdb|2WXH|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw14.
pdb|2WXI|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Sw30.
pdb|2WXJ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink654.
pdb|2WXK|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink666.
pdb|2WXL|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Zstk474.
pdb|2WXM|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Dl06.
pdb|2WXN|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Dl07.
pdb|2WXO|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As5.
pdb|2WXP|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Gdc-0941.
pdb|2WXQ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As15.
pdb|2WXR|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta.
pdb|2X38|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ic87114
Length = 940
Score = 114 bits (286), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 66/88 (75%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F CERA+ ILR HG L L LFA+M + GLPELS KD+ YL+++L L TEE+A+KHF
Sbjct: 852 FRGYCERAYTILRRHGLLFLHLFALMRAAGLPELSCSKDIQYLKDSLALGKTEEEALKHF 911
Query: 63 RSKFGEALANSWKTSLNWASHNLAKNNK 90
R KF EAL SWKT +NW +HN++K+N+
Sbjct: 912 RVKFNEALRESWKTKVNWLAHNVSKDNR 939
>pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of
P85beta And The Drug Gdc-0941
Length = 1092
Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 64/88 (72%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F CE A+ ILR HG+L ++LFA+M++ GLPEL+S KD+ YL+++L L +EE+A+K F
Sbjct: 1004 FRQCCEDAYLILRRHGNLFITLFALMLTAGLPELTSVKDIQYLKDSLALGKSEEEALKQF 1063
Query: 63 RSKFGEALANSWKTSLNWASHNLAKNNK 90
+ KF EAL SW T +NW +H + K+ +
Sbjct: 1064 KQKFDEALRESWTTKVNWMAHTVRKDYR 1091
>pdb|3HHM|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With
Nish2 Of P85alpha And The Drug Wortmannin
Length = 1091
Score = 80.5 bits (197), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 57/86 (66%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ +R+H +L ++LF+MM+ +G+PEL S D+ Y+R+TL LD TE++A+++F
Sbjct: 1003 FQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEYF 1062
Query: 63 RSKFGEALANSWKTSLNWASHNLAKN 88
+ +A W T ++W H + ++
Sbjct: 1063 MKQMNDARHGGWTTKMDWIFHTIKQH 1088
>pdb|3HIZ|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With
Nish2 Of P85alpha
Length = 1096
Score = 80.5 bits (197), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 57/86 (66%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ +R+H +L ++LF+MM+ +G+PEL S D+ Y+R+TL LD TE++A+++F
Sbjct: 1008 FQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEYF 1067
Query: 63 RSKFGEALANSWKTSLNWASHNLAKN 88
+ +A W T ++W H + ++
Sbjct: 1068 MKQMNDARHGGWTTKMDWIFHTIKQH 1093
>pdb|4A55|A Chain A, Crystal Structure Of P110alpha In Complex With Ish2 Of
P85alpha And The Inhibitor Pik-108
Length = 1096
Score = 80.1 bits (196), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 57/86 (66%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ +R+H +L ++LF+MM+ +G+PEL S D+ Y+R+TL LD TE++A+++F
Sbjct: 1008 FQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEYF 1067
Query: 63 RSKFGEALANSWKTSLNWASHNLAKN 88
+ +A W T ++W H + ++
Sbjct: 1068 TKQMNDAHHGGWTTKMDWIFHTIKQH 1093
>pdb|2RD0|A Chain A, Structure Of A Human P110alpha/p85alpha Complex
Length = 1096
Score = 80.1 bits (196), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 57/86 (66%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ +R+H +L ++LF+MM+ +G+PEL S D+ Y+R+TL LD TE++A+++F
Sbjct: 1008 FQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEYF 1067
Query: 63 RSKFGEALANSWKTSLNWASHNLAKN 88
+ +A W T ++W H + ++
Sbjct: 1068 MKQMNDAHHGGWTTKMDWIFHTIKQH 1093
>pdb|4ANV|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 71.2 bits (173), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+PEL+S++D+ Y+R+ L + EEDA K+F
Sbjct: 871 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPELTSKEDIEYIRDALTVGKNEEDAKKYF 930
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 931 LDQIEVCRDKGWTVQFNWFLH 951
>pdb|1E8X|A Chain A, Structural Insights Into Phoshoinositide 3-Kinase
Enzymatic Mechanism And Signalling
pdb|1E90|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E7V|A Chain A, Structure Determinants Of Phosphoinositide 3-kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8W|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + +EEDA K+F
Sbjct: 868 FQDVCVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKSEEDAKKYF 927
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 928 LDQIEVCRDKGWTVQFNWFLH 948
>pdb|1E7U|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + +EEDA K+F
Sbjct: 868 FQDVCVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKSEEDAKKYF 927
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 928 LDQIEVCRDKGWTVQFNWFLH 948
>pdb|3L54|A Chain A, Structure Of Pi3k Gamma With Inhibitor
Length = 966
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + EEDA K+F
Sbjct: 867 FQDVCVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 926
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 927 LDQIEVCRDKGWTVQFNWFLH 947
>pdb|3NZS|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
pdb|3NZU|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
Length = 954
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + EEDA K+F
Sbjct: 863 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 922
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 923 LDQIEVCRDKGWTVQFNWFLH 943
>pdb|4ANX|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + EEDA K+F
Sbjct: 871 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 930
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 931 LDQIEVCRDKGWTVQFNWFLH 951
>pdb|4ANU|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors.
pdb|4ANW|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + EEDA K+F
Sbjct: 871 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 930
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 931 LDQIEVCRDKGWTVQFNWFLH 951
>pdb|3APC|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5132799
pdb|3APD|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5108134
pdb|3APF|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5039699
Length = 966
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + EEDA K+F
Sbjct: 873 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 932
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 933 LDQIEVCRDKGWTVQFNWFLH 953
>pdb|3QAQ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 1
pdb|3QAR|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 32
pdb|3QJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 1
pdb|3QK0|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 82
pdb|3S2A|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With A
Quinoline Inhibitor
pdb|4FHJ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Imidazopyridine 2
pdb|4F1S|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine-Sulfonamide Inhibitor
pdb|4FLH|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Amg511
pdb|4FJY|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Quinoline-Indoline Inhibitor 24f
pdb|4FJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Pyrrolo-Pyridine Inhibitor 63
Length = 960
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + EEDA K+F
Sbjct: 867 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 926
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 927 LDQIEVCRDKGWTVQFNWFLH 947
>pdb|1HE8|A Chain A, Ras G12v-Pi 3-Kinase Gamma Complex
Length = 965
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + EEDA K+F
Sbjct: 866 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 925
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 926 LDQIEVCRDKGWTVQFNWFLH 946
>pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8Z|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|2A4Z|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With
As604850
pdb|2A5U|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With
As605240
pdb|2CHW|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110 Alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-39
pdb|2CHX|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-90
pdb|2CHZ|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-93
pdb|3DPD|A Chain A, Achieving Multi-Isoform Pi3k Inhibition In A Series Of
Substituted 3,4-Dihydro-2h-Benzo[1,4]oxazines
pdb|2V4L|A Chain A, Complex Of Human Phosphoinositide 3-kinase Catalytic
Subunit Gamma (p110 Gamma) With Pik-284
pdb|3IBE|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Bound
To Pi3 Kinase Gamma
pdb|3LJ3|A Chain A, Pi3-Kinase-Gamma With A Pyrrolopyridine-Benzofuran
Inhibitor
pdb|3ML8|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR
PF-0 Through Structure Based Drug Design
pdb|3ML9|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR
PF-0 Through Structure Based Drug Design
pdb|3MJW|A Chain A, Pi3 Kinase Gamma With A Benzofuranone Inhibitor
pdb|3P2B|A Chain A, Crystal Structure Of Pi3k Gamma With
3-(2-Morpholino-6-(Pyridin-3-
Ylamino)pyrimidin-4-Yl)phenol
pdb|3SD5|A Chain A, Crystal Structure Of Pi3k Gamma With
5-(2,4-Dimorpholinopyrimidin-6-
Yl)-4-(Trifluoromethyl)pyridin-2-Amine
pdb|3TJP|A Chain A, Crystal Structure Of Pi3k Gamma With
N6-(3,4-Dimethoxyphenyl)-2-
Morpholino-[4,5'-Bipyrimidine]-2',6-Diamine
pdb|4FUL|A Chain A, Pi3 Kinase Gamma Bound To A Pyrmidine Inhibitor
Length = 966
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + EEDA K+F
Sbjct: 867 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 926
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 927 LDQIEVCRDKGWTVQFNWFLH 947
>pdb|4DK5|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine Inhibitor
Length = 959
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + EEDA K+F
Sbjct: 866 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 925
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 926 LDQIEVCRDKGWTVQFNWFLH 946
>pdb|3ENE|A Chain A, Complex Of Pi3k Gamma With An Inhibitor
Length = 959
Score = 70.1 bits (170), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + EEDA K+F
Sbjct: 866 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 925
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 926 LDQIEVCRDKGWTVQFNWFLH 946
>pdb|3DBS|A Chain A, Structure Of Pi3k Gamma In Complex With Gdc0941
pdb|3L13|A Chain A, Crystal Structures Of Pan-Pi3-Kinase And Dual
Pan-Pi3-KinaseMTOR Inhibitors
pdb|4AOF|A Chain A, Selective Small Molecule Inhibitor Discovered By
Chemoproteomic Assay Platform Reveals Regulation Of Th17
Cell Differentiation By Pi3kgamma
Length = 960
Score = 69.7 bits (169), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + EEDA K+F
Sbjct: 867 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 926
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 927 LDQIEVCRDKGWTVQFNWFLH 947
>pdb|3CST|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor E5e2
pdb|3CSF|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor Dw2
pdb|3L16|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE
TREATMENT OF CANCER
pdb|3L17|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE
TREATMENT OF CANCER
pdb|3L08|A Chain A, Structure Of Pi3k Gamma With A Potent Inhibitor:
Gsk2126458
pdb|3OAW|A Chain A, 4-Methylpteridineones As Orally Active And Selective
Pi3kMTOR DUAL Inhibitors
pdb|3PRE|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PRZ|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PS6|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3R7Q|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3- Kinase
pdb|3R7R|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3-Kinase
pdb|3ZVV|A Chain A, Fragment Bound To Pi3kinase Gamma
pdb|3ZW3|A Chain A, Fragment Based Discovery Of A Novel And Selective Pi3
Kinase Inhibitor
pdb|3TL5|A Chain A, Discovery Of Gdc-0980: A Potent, Selective, And Orally
Available Class I Phosphatidylinositol 3-Kinase
(Pi3k)MAMMALIAN TARGET OF RAPAMYCIN (Mtor) Kinase
Inhibitor For The Treatment Of Cancer
pdb|3T8M|A Chain A, Rational Design Of Pi3k-Alpha Inhibitors That Exhibit
Selectivity Over The Pi3k-Beta Isoform
pdb|4GB9|A Chain A, Potent And Highly Selective Benzimidazole Inhibitors Of
Pi3k-Delta
pdb|4G11|A Chain A, X-Ray Structure Of Pi3k-Gamma Bound To A
4-(Morpholin-4-Yl)- (6-Oxo-1,
6-Dihydropyrimidin-2-Yl)amide Inhibitor
pdb|4HLE|A Chain A, Compound 21 (1-alkyl-substituted 1,2,4-triazoles)
Length = 966
Score = 69.7 bits (169), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L + EEDA K+F
Sbjct: 867 FQDICVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKNEEDAKKYF 926
Query: 63 RSKFGEALANSWKTSLNWASH 83
+ W NW H
Sbjct: 927 LDQIEVCRDKGWTVQFNWFLH 947
>pdb|3ZIM|A Chain A, Discovery Of A Potent And Isoform-selective Targeted
Covalent Inhibitor Of The Lipid Kinase Pi3kalpha
Length = 940
Score = 68.2 bits (165), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 48/67 (71%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHF 62
F C +A+ +R+H +L ++LF+MM+ +G+PEL S D+ Y+R+TL LD TE++A+++F
Sbjct: 874 FQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEYF 933
Query: 63 RSKFGEA 69
+ +A
Sbjct: 934 MKQMNDA 940
>pdb|2X6F|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6F|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6H|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6H|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6I|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6I|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6J|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6J|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6K|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
pdb|2X6K|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
Length = 696
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKD--VNYLRETLVLDLTEEDAIK 60
F QC A+ LR H +++L+LF++M+ +P+++ E D V + E L L LT+E+A++
Sbjct: 607 FRKQCYTAYLHLRRHANVMLNLFSLMVDATVPDIALEPDKAVKKVEENLQLGLTDEEAVQ 666
Query: 61 HFRS 64
H +S
Sbjct: 667 HLQS 670
>pdb|3IHY|A Chain A, Human Pik3c3 Crystal Structure
pdb|3IHY|B Chain B, Human Pik3c3 Crystal Structure
pdb|3IHY|C Chain C, Human Pik3c3 Crystal Structure
pdb|3IHY|D Chain D, Human Pik3c3 Crystal Structure
pdb|3IHY|E Chain E, Human Pik3c3 Crystal Structure
Length = 600
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKD--VNYLRETLVLDLTEEDAIK 60
F QC AF LR + +LIL+LF++M+ +P+++ E D V +++ LDL++E+A+
Sbjct: 519 FRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVH 578
Query: 61 HFRSKFGEAL 70
+ +S E++
Sbjct: 579 YMQSLIDESV 588
>pdb|3LS8|A Chain A, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
pdb|3LS8|B Chain B, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
Length = 614
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 3 FNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKD--VNYLRETLVLDLTEEDAIK 60
F QC AF LR + +LIL+LF++M+ +P+++ E D V +++ LDL++E+A+
Sbjct: 533 FRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVH 592
Query: 61 HFRSKFGEAL 70
+ +S E++
Sbjct: 593 YMQSLIDESV 602
>pdb|3E29|A Chain A, X-Ray Structure Of The Protein Q7we92_borbr From
Thioesterase Superfamily. Northeast Structural Genomics
Consortium Target Bor214a.
pdb|3E29|B Chain B, X-Ray Structure Of The Protein Q7we92_borbr From
Thioesterase Superfamily. Northeast Structural Genomics
Consortium Target Bor214a.
pdb|3E29|C Chain C, X-Ray Structure Of The Protein Q7we92_borbr From
Thioesterase Superfamily. Northeast Structural Genomics
Consortium Target Bor214a.
pdb|3E29|D Chain D, X-Ray Structure Of The Protein Q7we92_borbr From
Thioesterase Superfamily. Northeast Structural Genomics
Consortium Target Bor214a
Length = 144
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 12 KILREHGSLILSL------FAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHFRSK 65
+I HG ++ +L +A+ + TG P + + V+Y R DL E + HF +
Sbjct: 49 EIRSTHGGILATLVDAAGDYAVALKTGHPVPTXDXHVDYHRVATPGDLRAEGQVIHFGKR 108
Query: 66 FGEALA 71
F A A
Sbjct: 109 FATAHA 114
>pdb|2VP8|A Chain A, Structure Of Mycobacterium Tuberculosis Rv1207
pdb|2VP8|B Chain B, Structure Of Mycobacterium Tuberculosis Rv1207
Length = 318
Score = 30.0 bits (66), Expect = 0.32, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 17 HGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTE 55
HG L+L A ++ TG P L + + + + ETL +DLTE
Sbjct: 228 HGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGVDLTE 266
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 36 LSSEKDVNYLRETLVLDLTEEDAIKHFRSKFGEALANSWKTSLNW-ASHNL 85
LSS++ + + D A+K R FG+ L SW NW +HN+
Sbjct: 52 LSSQRLIKEACDESRFDKNLSQALKFVRDFFGDGLFTSWTHEKNWKKAHNI 102
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 36 LSSEKDVNYLRETLVLDLTEEDAIKHFRSKFGEALANSWKTSLNW-ASHNL 85
LSS++ + + D A+K R G+ LA SW NW +HN+
Sbjct: 52 LSSQRLIKEACDESRFDKNLSQALKFVRDFAGDGLATSWTHEKNWKKAHNI 102
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 36 LSSEKDVNYLRETLVLDLTEEDAIKHFRSKFGEALANSWKTSLNW-ASHNL 85
LSS++ + + D A+K R G+ LA SW NW +HN+
Sbjct: 52 LSSQRLIKEACDESRFDKNLSQALKFVRDFAGDGLATSWTHEKNWKKAHNI 102
>pdb|4DQY|C Chain C, Structure Of Human Parp-1 Bound To A Dna Double Strand
Break
pdb|4DQY|F Chain F, Structure Of Human Parp-1 Bound To A Dna Double Strand
Break
Length = 506
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 54 TEEDAIKHFRSKFGEALANSWKT 76
++EDAI+HF + E N+W +
Sbjct: 90 SKEDAIEHFMKLYEEKTGNAWHS 112
>pdb|3BH1|A Chain A, Crystal Structure Of Protein Dip2346 From Corynebacterium
Diphtheriae
pdb|3BH1|B Chain B, Crystal Structure Of Protein Dip2346 From Corynebacterium
Diphtheriae
pdb|3BH1|C Chain C, Crystal Structure Of Protein Dip2346 From Corynebacterium
Diphtheriae
pdb|3BH1|D Chain D, Crystal Structure Of Protein Dip2346 From Corynebacterium
Diphtheriae
Length = 507
Score = 25.8 bits (55), Expect = 6.1, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 12 KILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKHFR-SKFGEAL 70
++ EH + + +A + + L E VN E +DL + + I HF + +GE
Sbjct: 194 QVYHEHKRGVAAGYAKFETFPIWNLPLEHPVNLAYEAATVDLNDANVIDHFHLAAYGEQT 253
Query: 71 AN 72
N
Sbjct: 254 VN 255
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 25.8 bits (55), Expect = 6.1, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 36 LSSEKDVNYLRETLVLDLTEEDAIKHFRSKFGEALANSWKTSLNWA-SHNL 85
LSS++ + + D A+K R G+ L SW NW +HN+
Sbjct: 53 LSSQRLIKEAADESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWCKAHNI 103
>pdb|2HZP|A Chain A, Crystal Structure Of Homo Sapiens Kynureninase
Length = 501
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 36 LSSEKDVNYLRETLVLDLTEEDAIKHFRSKF 66
+++E + E + L L EED ++HFR F
Sbjct: 52 IAAELKCHPTDERVALHLDEEDKLRHFREXF 82
>pdb|3E9K|A Chain A, Crystal Structure Of Homo Sapiens
Kynureninase-3-Hydroxyhippuric Acid Inhibitor Complex
Length = 465
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 36 LSSEKDVNYLRETLVLDLTEEDAIKHFRSKF 66
+++E + E + L L EED ++HFR F
Sbjct: 16 IAAELKCHPTDERVALHLDEEDKLRHFREXF 46
>pdb|2EOC|A Chain A, Solution Structure Of The Wgr Domain From Human Poly [adp-
Ribose] Polymerase-3
Length = 124
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 56 EDAIKHFRSKFGEALANSWKTSLNWASH 83
EDA K F KF E N+W ++ SH
Sbjct: 86 EDAKKDFEKKFREKTKNNWAERDHFVSH 113
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 25.4 bits (54), Expect = 9.1, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 36 LSSEKDVNYLRETLVLDLTEEDAIKHFRSKFGEALANSWKTSLNW-ASHNL 85
LSS++ + + D A+K R G+ L SW NW +HN+
Sbjct: 52 LSSQRLIKEACDESRFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNI 102
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 25.4 bits (54), Expect = 9.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 36 LSSEKDVNYLRETLVLDLTEEDAIKHFRSKFGEALANSWKTSLNW-ASHNL 85
LSS++ + + D A+K R G+ L SW NW +HN+
Sbjct: 52 LSSQRLIKEACDESRFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNI 102
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 25.4 bits (54), Expect = 9.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 36 LSSEKDVNYLRETLVLDLTEEDAIKHFRSKFGEALANSWKTSLNW-ASHNL 85
LSS++ + + D A+K R G+ L SW NW +HN+
Sbjct: 53 LSSQRLIKEACDESRFDKNLSQALKFVRDFAGDGLLTSWTHEKNWKKAHNI 103
>pdb|2VEC|A Chain A, The Crystal Structure Of The Protein Yhak From Escherichia
Coli
Length = 256
Score = 25.0 bits (53), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 61 HFRSKFGEALANSWKTSLNWASHNLAKN 88
H ++ GEAL S + ++++ HNL+K+
Sbjct: 105 HVQASAGEALLLSTQPGVSYSEHNLSKD 132
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,561,760
Number of Sequences: 62578
Number of extensions: 80223
Number of successful extensions: 349
Number of sequences better than 100.0: 73
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 308
Number of HSP's gapped (non-prelim): 73
length of query: 90
length of database: 14,973,337
effective HSP length: 57
effective length of query: 33
effective length of database: 11,406,391
effective search space: 376410903
effective search space used: 376410903
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)