RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11388
         (90 letters)



>d1e7ua4 d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (PI3K),
           catalytic domain {Pig (Sus scrofa) [TaxId: 9823]}
          Length = 369

 Score = 82.8 bits (204), Expect = 4e-21
 Identities = 30/82 (36%), Positives = 49/82 (59%)

Query: 2   LFNTQCERAFKILREHGSLILSLFAMMISTGLPELSSEKDVNYLRETLVLDLTEEDAIKH 61
            F   C +A+  LR H +L++ LF+MM+ TG+P+L+S++D+ Y+R+ L +  +EEDA K+
Sbjct: 283 KFQDVCVKAYLALRHHTNLLIILFSMMLMTGMPQLTSKEDIEYIRDALTVGKSEEDAKKY 342

Query: 62  FRSKFGEALANSWKTSLNWASH 83
           F  +        W    NW  H
Sbjct: 343 FLDQIEVCRDKGWTVQFNWFLH 364


>d2cr9a1 d.297.1.1 (A:8-133) Poly [ADP-ribose] polymerase-1, PARP-1
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 126

 Score = 26.0 bits (57), Expect = 0.50
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 54  TEEDAIKHFRSKFGEALANSWK 75
           ++EDAI+HF   + E   N+W 
Sbjct: 89  SKEDAIEHFMKLYEEKTGNAWH 110


>d1gvja_ a.4.5.21 (A:) ETS-1 transcription factor, residues
          331-440 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 142

 Score = 23.6 bits (51), Expect = 3.4
 Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 7/50 (14%)

Query: 44 YLRETLVLDLTEEDAIK------HFRSKFGEALANSWKTSLNWASHNLAK 87
          +L E L+ D + +  I        F+    + +A  W    N    N  K
Sbjct: 45 FLLE-LLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEK 93


>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A
           subunit) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 473

 Score = 23.8 bits (51), Expect = 3.8
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 5   TQCERAFKILREHGSLILSLFAMMISTGLPE--LSSEKDVNYLRETLVLDLTEEDAIKHF 62
            +  R F +LRE    +L+L  +  +  LP   LS  K    L+   V  +  ++AIK F
Sbjct: 391 GKMARVFSVLREESESVLTLKGLTPTGMLPSGVLSGGKQT--LQSATVEAIEADEAIKGF 448

Query: 63  R-----SKFGEA 69
                 + F EA
Sbjct: 449 SPQHKITSFEEA 460


>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus)
          [TaxId: 10090]}
          Length = 242

 Score = 23.4 bits (50), Expect = 4.6
 Identities = 6/21 (28%), Positives = 10/21 (47%)

Query: 47 ETLVLDLTEEDAIKHFRSKFG 67
          E + +DL + DA +      G
Sbjct: 53 EPVCVDLGDWDATEKALGGIG 73


>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 131

 Score = 22.6 bits (48), Expect = 7.8
 Identities = 3/22 (13%), Positives = 7/22 (31%)

Query: 68  EALANSWKTSLNWASHNLAKNN 89
           E +  +W   +     +    N
Sbjct: 110 ENVGKAWAEDVLALVKHPLTAN 131


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.130    0.375 

Gapped
Lambda     K      H
   0.267   0.0599    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 314,289
Number of extensions: 11482
Number of successful extensions: 38
Number of sequences better than 10.0: 1
Number of HSP's gapped: 38
Number of HSP's successfully gapped: 11
Length of query: 90
Length of database: 2,407,596
Length adjustment: 54
Effective length of query: 36
Effective length of database: 1,666,176
Effective search space: 59982336
Effective search space used: 59982336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.2 bits)