BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11394
(391 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P08510|KCNAS_DROME Potassium voltage-gated channel protein Shaker OS=Drosophila
melanogaster GN=Sh PE=1 SV=3
Length = 655
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/377 (66%), Positives = 281/377 (74%), Gaps = 18/377 (4%)
Query: 20 HFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDR 79
HFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFP+TLLGDPARR+RYFDPLRNEYFFDR
Sbjct: 85 HFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRYFDPLRNEYFFDR 144
Query: 80 NRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEEKPL 139
+RPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGD A NKFREDEGFIKEEE+PL
Sbjct: 145 SRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDQAINKFREDEGFIKEEERPL 204
Query: 140 PSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNG 199
P +E QRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNG
Sbjct: 205 PDNEKQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNG 264
Query: 200 TKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYIFAGVVL 259
TKIEEDEVPDITDPFFLIET I+ + L L + + +M + + +
Sbjct: 265 TKIEEDEVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCR----DVMNVIDIIAI 320
Query: 260 FSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGVFCRSRL----R 315
+ A +++ ++P A V D + RL R
Sbjct: 321 IPYFITLATVVAEEEDTLNLPKA---------PVSPQDKSSNQAMSLAILRVIRLVRVFR 371
Query: 316 KFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFKSIPD 374
F L +S+ ++G+++ + + + + GVVLFSSAVYFAEAGSENSFFKSIPD
Sbjct: 372 IFKLSRHSKGLQILGRTLKASMRELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIPD 431
Query: 375 AFWWAVVTMTTVGYGDM 391
AFWWAVVTMTTVGYGDM
Sbjct: 432 AFWWAVVTMTTVGYGDM 448
>sp|Q09470|KCNA1_HUMAN Potassium voltage-gated channel subfamily A member 1 OS=Homo
sapiens GN=KCNA1 PE=1 SV=2
Length = 495
Score = 360 bits (923), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 205/403 (50%), Positives = 250/403 (62%), Gaps = 50/403 (12%)
Query: 4 DEDGPPSHSQ--HYP-GVDHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPETLLGD 60
+ P H Q YP DH DH+ CERVVIN+SGLRFETQL+TL QFP TLLG+
Sbjct: 11 EASAAPGHPQDGSYPRQADH-----DDHECCERVVINISGLRFETQLKTLAQFPNTLLGN 65
Query: 61 PARRIRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDV 120
P +R+RYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLD+FSEEIKFYELG+
Sbjct: 66 PKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDMFSEEIKFYELGEE 125
Query: 121 ATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFC 180
A KFREDEGFIKEEE+PLP E+QR+VWLLFEYPESS ARV+AI+SV VIL+SIVIFC
Sbjct: 126 AMEKFREDEGFIKEEERPLPEKEYQRQVWLLFEYPESSGPARVIAIVSVMVILISIVIFC 185
Query: 181 LETLPEFKHYKVFNTTT----NGTKIEEDEVPDITDPFFLIETFLIM-------PSLYCL 229
LETLPE K K F T N T I + TDPFF++ET I+ +
Sbjct: 186 LETLPELKDDKDFTGTVHRIDNTTVIYNSNI--FTDPFFIVETLCIIWFSFELVVRFFAC 243
Query: 230 LTSLLLYSVVMIYVHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVT 289
+ + +M ++ ++ I +I G + AE +Q
Sbjct: 244 PSKTDFFKNIMNFIDIVAIIPYFITLGTEI-------AEQEGNQK--------------- 281
Query: 290 MTTVGYGDMRCGAFFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGY 348
G+ R + R F L +S+ ++G+++ + + + +
Sbjct: 282 ------GEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFI 335
Query: 349 GVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
GV+LFSSAVYFAEA S F SIPDAFWWAVV+MTTVGYGDM
Sbjct: 336 GVILFSSAVYFAEAEEAESHFSSIPDAFWWAVVSMTTVGYGDM 378
>sp|P10499|KCNA1_RAT Potassium voltage-gated channel subfamily A member 1 OS=Rattus
norvegicus GN=Kcna1 PE=1 SV=1
Length = 495
Score = 359 bits (922), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/405 (50%), Positives = 251/405 (61%), Gaps = 50/405 (12%)
Query: 2 SQDEDGPPSHSQ--HYP-GVDHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPETLL 58
+ + P H Q YP DH DH+ CERVVIN+SGLRFETQL+TL QFP TLL
Sbjct: 9 ADEASAAPGHPQDGSYPRQADH-----DDHECCERVVINISGLRFETQLKTLAQFPNTLL 63
Query: 59 GDPARRIRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELG 118
G+P +R+RYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLD+FSEEIKFYELG
Sbjct: 64 GNPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDMFSEEIKFYELG 123
Query: 119 DVATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVI 178
+ A KFREDEGFIKEEE+PLP E+QR+VWLLFEYPESS ARV+AI+SV VIL+SIVI
Sbjct: 124 EEAMEKFREDEGFIKEEERPLPEKEYQRQVWLLFEYPESSGPARVIAIVSVMVILISIVI 183
Query: 179 FCLETLPEFKHYKVFNTTT----NGTKIEEDEVPDITDPFFLIETFLIM-------PSLY 227
FCLETLPE K K F T N T I + TDPFF++ET I+ +
Sbjct: 184 FCLETLPELKDDKDFTGTIHRIDNTTVIYTSNI--FTDPFFIVETLCIIWFSFELVVRFF 241
Query: 228 CLLTSLLLYSVVMIYVHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAV 287
+ + +M ++ ++ I +I G + AE +Q
Sbjct: 242 ACPSKTDFFKNIMNFIDIVAIIPYFITLGTEI-------AEQEGNQK------------- 281
Query: 288 VTMTTVGYGDMRCGAFFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTV 346
G+ R + R F L +S+ ++G+++ + + + +
Sbjct: 282 --------GEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFL 333
Query: 347 GYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
GV+LFSSAVYFAEA S F SIPDAFWWAVV+MTTVGYGDM
Sbjct: 334 FIGVILFSSAVYFAEAEEAESHFSSIPDAFWWAVVSMTTVGYGDM 378
>sp|P16388|KCNA1_MOUSE Potassium voltage-gated channel subfamily A member 1 OS=Mus
musculus GN=Kcna1 PE=2 SV=1
Length = 495
Score = 358 bits (920), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 205/398 (51%), Positives = 249/398 (62%), Gaps = 50/398 (12%)
Query: 9 PSHSQ--HYP-GVDHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRI 65
P H Q YP DH DH+ CERVVIN+SGLRFETQL+TL QFP TLLG+P +R+
Sbjct: 16 PGHPQDGSYPRQADH-----DDHECCERVVINISGLRFETQLKTLAQFPNTLLGNPKKRM 70
Query: 66 RYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKF 125
RYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLD+FSEEIKFYELG+ A KF
Sbjct: 71 RYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDMFSEEIKFYELGEEAMEKF 130
Query: 126 REDEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLP 185
REDEGFIKEEE+PLP E+QR+VWLLFEYPESS ARV+AI+SV VIL+SIVIFCLETLP
Sbjct: 131 REDEGFIKEEERPLPEKEYQRQVWLLFEYPESSGPARVIAIVSVMVILISIVIFCLETLP 190
Query: 186 EFKHYKVFNTTT----NGTKIEEDEVPDITDPFFLIETFLIM-------PSLYCLLTSLL 234
E K K F T N T I + TDPFF++ET I+ + +
Sbjct: 191 ELKDDKDFTGTIHRIDNTTVIYTSNI--FTDPFFIVETLCIIWFSFELVVRFFACPSKTD 248
Query: 235 LYSVVMIYVHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVG 294
+ +M ++ ++ I +I G + AE +Q
Sbjct: 249 FFKNIMNFIDIVAIIPYFITLGTEI-------AEQEGNQK-------------------- 281
Query: 295 YGDMRCGAFFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLF 353
G+ R + R F L +S+ ++G+++ + + + + GV+LF
Sbjct: 282 -GEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILF 340
Query: 354 SSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
SSAVYFAEA S F SIPDAFWWAVV+MTTVGYGDM
Sbjct: 341 SSAVYFAEAEEAESHFSSIPDAFWWAVVSMTTVGYGDM 378
>sp|P63142|KCNA2_RAT Potassium voltage-gated channel subfamily A member 2 OS=Rattus
norvegicus GN=Kcna2 PE=1 SV=1
Length = 499
Score = 353 bits (907), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 200/399 (50%), Positives = 251/399 (62%), Gaps = 50/399 (12%)
Query: 9 PSHSQHYPGVDHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYF 68
P H Q D ++P DH+ CERVVIN+SGLRFETQL+TL QFPETLLGDP +R+RYF
Sbjct: 16 PGHPQ-----DTYDP-EADHECCERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYF 69
Query: 69 DPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFRED 128
DPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLD+FSEEI+FYELG+ A FRED
Sbjct: 70 DPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFRED 129
Query: 129 EGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFK 188
EG+IKEEE+PLP +EFQR+VWLLFEYPESS AR++AI+SV VIL+SIV FCLETLP F+
Sbjct: 130 EGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFR 189
Query: 189 HYK--------VFNTTTNGTKIEEDEVPDITDPFFLIETFLI-------MPSLYCLLTSL 233
F+T +N T I + TDPFF++ET I + + +
Sbjct: 190 DENEDMHGGGVTFHTYSNST-IGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKA 248
Query: 234 LLYSVVMIYVHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTV 293
++ +M + ++ I +I G L AE D + V+ + V
Sbjct: 249 GFFTNIMNIIDIVAIIPYFITLGTEL-------AEKPEDAQQGQQAMSLAILRVIRLVRV 301
Query: 294 GYGDMRCGAFFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVL 352
R F L +S+ ++G+++ + + + + GV+L
Sbjct: 302 --------------------FRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVIL 341
Query: 353 FSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
FSSAVYFAEA +S F SIPDAFWWAVV+MTTVGYGDM
Sbjct: 342 FSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDM 380
>sp|P63141|KCNA2_MOUSE Potassium voltage-gated channel subfamily A member 2 OS=Mus
musculus GN=Kcna2 PE=1 SV=1
Length = 499
Score = 353 bits (907), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 200/399 (50%), Positives = 251/399 (62%), Gaps = 50/399 (12%)
Query: 9 PSHSQHYPGVDHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYF 68
P H Q D ++P DH+ CERVVIN+SGLRFETQL+TL QFPETLLGDP +R+RYF
Sbjct: 16 PGHPQ-----DTYDP-EADHECCERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYF 69
Query: 69 DPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFRED 128
DPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLD+FSEEI+FYELG+ A FRED
Sbjct: 70 DPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFRED 129
Query: 129 EGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFK 188
EG+IKEEE+PLP +EFQR+VWLLFEYPESS AR++AI+SV VIL+SIV FCLETLP F+
Sbjct: 130 EGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFR 189
Query: 189 HYK--------VFNTTTNGTKIEEDEVPDITDPFFLIETFLI-------MPSLYCLLTSL 233
F+T +N T I + TDPFF++ET I + + +
Sbjct: 190 DENEDMHGGGVTFHTYSNST-IGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKA 248
Query: 234 LLYSVVMIYVHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTV 293
++ +M + ++ I +I G L AE D + V+ + V
Sbjct: 249 GFFTNIMNIIDIVAIIPYFITLGTEL-------AEKPEDAQQGQQAMSLAILRVIRLVRV 301
Query: 294 GYGDMRCGAFFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVL 352
R F L +S+ ++G+++ + + + + GV+L
Sbjct: 302 --------------------FRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVIL 341
Query: 353 FSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
FSSAVYFAEA +S F SIPDAFWWAVV+MTTVGYGDM
Sbjct: 342 FSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDM 380
>sp|P16389|KCNA2_HUMAN Potassium voltage-gated channel subfamily A member 2 OS=Homo
sapiens GN=KCNA2 PE=1 SV=2
Length = 499
Score = 353 bits (906), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/399 (50%), Positives = 250/399 (62%), Gaps = 50/399 (12%)
Query: 9 PSHSQHYPGVDHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYF 68
P H Q D ++P DH+ CERVVIN+SGLRFETQL+TL QFPETLLGDP +R+RYF
Sbjct: 16 PGHPQ-----DTYDP-EADHECCERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYF 69
Query: 69 DPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFRED 128
DPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLD+FSEEI+FYELG+ A FRED
Sbjct: 70 DPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFRED 129
Query: 129 EGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFK 188
EG+IKEEE+PLP +EFQR+VWLLFEYPESS AR++AI+SV VIL+SIV FCLETLP F+
Sbjct: 130 EGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFR 189
Query: 189 HYK--------VFNTTTNGTKIEEDEVPDITDPFFLIETFLI-------MPSLYCLLTSL 233
F+T +N T I + TDPFF++ET I + + +
Sbjct: 190 DENEDMHGSGVTFHTYSNST-IGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKA 248
Query: 234 LLYSVVMIYVHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTV 293
++ +M + ++ I +I G L AE D + V+ + V
Sbjct: 249 GFFTNIMNIIDIVAIIPYFITLGTEL-------AEKPEDAQQGQQAMSLAILRVIRLVRV 301
Query: 294 GYGDMRCGAFFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVL 352
R F L +S+ ++G+++ + + + + GV+L
Sbjct: 302 --------------------FRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVIL 341
Query: 353 FSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
FSSAVYFAEA S F SIPDAFWWAVV+MTTVGYGDM
Sbjct: 342 FSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDM 380
>sp|P16390|KCNA3_MOUSE Potassium voltage-gated channel subfamily A member 3 OS=Mus
musculus GN=Kcna3 PE=2 SV=3
Length = 528
Score = 352 bits (902), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 195/390 (50%), Positives = 245/390 (62%), Gaps = 40/390 (10%)
Query: 19 DHFEPIP------HDHDFC-ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPL 71
D +EP+P + D C ERVVIN+SGLRFETQL+TL QFPETLLGDP RR+RYFDPL
Sbjct: 37 DRYEPLPPALPAAGEQDCCGERVVINISGLRFETQLKTLCQFPETLLGDPKRRMRYFDPL 96
Query: 72 RNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGF 131
RNEYFFDRNRPSFDAILYYYQSGGR+RRPVNVP+D+FSEEI+FY+LG+ A KFREDEGF
Sbjct: 97 RNEYFFDRNRPSFDAILYYYQSGGRIRRPVNVPIDIFSEEIRFYQLGEEAMEKFREDEGF 156
Query: 132 IKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYK 191
++EEE+PLP +FQR+VWLLFEYPESS AR +AI+SV VIL+SIVIFCLETLPEF+ K
Sbjct: 157 LREEERPLPRRDFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPEFRDEK 216
Query: 192 ---------VFNTTTNGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIY 242
VF N T +DPFF++ET I+ + LL +
Sbjct: 217 DYPASPSQDVFEAANNSTSGAPSGASSFSDPFFVVETLCIIWFSFELLVRFFACPSKATF 276
Query: 243 VHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGA 302
++ + + + + YF G++ + G G
Sbjct: 277 SRNIMNL-------IDIVAIIPYFITLGTELA----------------ERQGNGQQAMSL 313
Query: 303 FFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAE 361
R + R F L +S+ ++G+++ + + + + GV+LFSSAVYFAE
Sbjct: 314 AILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 373
Query: 362 AGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
A +S F SIPDAFWWAVVTMTTVGYGDM
Sbjct: 374 ADDPSSGFNSIPDAFWWAVVTMTTVGYGDM 403
>sp|P15384|KCNA3_RAT Potassium voltage-gated channel subfamily A member 3 OS=Rattus
norvegicus GN=Kcna3 PE=1 SV=2
Length = 525
Score = 349 bits (895), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/392 (50%), Positives = 246/392 (62%), Gaps = 40/392 (10%)
Query: 17 GVDHFEPIP------HDHDFC-ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFD 69
G D +EP+P + D C ERVVIN+SGLRFETQL+TL QFPETLLGDP RR+RYFD
Sbjct: 32 GCDRYEPLPPALPAAGEQDCCGERVVINISGLRFETQLKTLCQFPETLLGDPKRRMRYFD 91
Query: 70 PLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDE 129
PLRNEYFFDRNRPSFDAILYYYQSGGR+RRPVNVP+D+FSEEI+FY+LG+ A KFREDE
Sbjct: 92 PLRNEYFFDRNRPSFDAILYYYQSGGRIRRPVNVPIDIFSEEIRFYQLGEEAMEKFREDE 151
Query: 130 GFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKH 189
GF++EEE+PLP +FQR+VWLLFEYPESS AR +AI+SV VIL+SIVIFCLETLPEF+
Sbjct: 152 GFLREEERPLPRRDFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPEFRD 211
Query: 190 YK---------VFNTTTNGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVM 240
K VF N T +DPFF++ET I+ + LL
Sbjct: 212 EKDYPASPSQDVFEAANNSTSGASSGASSFSDPFFVVETLCIIWFSFELLVRFFACPSKA 271
Query: 241 IYVHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRC 300
+ ++ + + + + YF G++ + G G
Sbjct: 272 TFSRNIMNL-------IDIVAIIPYFITLGTELA----------------ERQGNGQQAM 308
Query: 301 GAFFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYF 359
R + R F L +S+ ++G+++ + + + + GV+LFSSAVYF
Sbjct: 309 SLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYF 368
Query: 360 AEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
AEA +S F SIPDAFWWAVVTMTTVGYGDM
Sbjct: 369 AEADDPSSGFNSIPDAFWWAVVTMTTVGYGDM 400
>sp|P22001|KCNA3_HUMAN Potassium voltage-gated channel subfamily A member 3 OS=Homo
sapiens GN=KCNA3 PE=2 SV=3
Length = 575
Score = 348 bits (893), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 194/390 (49%), Positives = 246/390 (63%), Gaps = 40/390 (10%)
Query: 19 DHFEPIP------HDHDFC-ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPL 71
D +EP+P + D C ERVVIN+SGLRFETQL+TL QFPETLLGDP RR+RYFDPL
Sbjct: 84 DRYEPLPPSLPAAGEQDCCGERVVINISGLRFETQLKTLCQFPETLLGDPKRRMRYFDPL 143
Query: 72 RNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGF 131
RNEYFFDRNRPSFDAILYYYQSGGR+RRPVNVP+D+FSEEI+FY+LG+ A KFREDEGF
Sbjct: 144 RNEYFFDRNRPSFDAILYYYQSGGRIRRPVNVPIDIFSEEIRFYQLGEEAMEKFREDEGF 203
Query: 132 IKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYK 191
++EEE+PLP +FQR+VWLLFEYPESS AR +AI+SV VIL+SIVIFCLETLPEF+ K
Sbjct: 204 LREEERPLPRRDFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPEFRDEK 263
Query: 192 VFNTTT---------NGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIY 242
+ +T N T +DPFF++ET I+ + LL +
Sbjct: 264 DYPASTSQDSFEAAGNSTSGSRAGASSFSDPFFVVETLCIIWFSFELLVRFFACPSKATF 323
Query: 243 VHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGA 302
++ + + + + YF G++ + + G G
Sbjct: 324 SRNIMNL-------IDIVAIIPYFITLGTELAERQ----------------GNGQQAMSL 360
Query: 303 FFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAE 361
R + R F L +S+ ++G+++ + + + + GV+LFSSAVYFAE
Sbjct: 361 AILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE 420
Query: 362 AGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
A S F SIPDAFWWAVVTMTTVGYGDM
Sbjct: 421 ADDPTSGFSSIPDAFWWAVVTMTTVGYGDM 450
>sp|P22739|KCNA2_XENLA Potassium voltage-gated channel subfamily A member 2 OS=Xenopus
laevis GN=kcna2 PE=3 SV=2
Length = 499
Score = 347 bits (891), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 195/386 (50%), Positives = 245/386 (63%), Gaps = 39/386 (10%)
Query: 19 DHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFD 78
D ++P P DH+ CERVVIN+SGLRFETQL+TL+QFPETLLGDP +R+RYFDPLRNEYFFD
Sbjct: 21 DSYDPEP-DHECCERVVINISGLRFETQLKTLSQFPETLLGDPKKRMRYFDPLRNEYFFD 79
Query: 79 RNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEEKP 138
RNRPSFDAILY+YQSGGRLRRPVNVPLD+FSEEI+FYELG+ A FREDEGFIKEEE+P
Sbjct: 80 RNRPSFDAILYFYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEIFREDEGFIKEEERP 139
Query: 139 LPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFK---------- 188
LP +EFQ++VWLLFEYPESS AR++AIISV VIL+SIV FCLETLP F+
Sbjct: 140 LPDNEFQKQVWLLFEYPESSGPARIIAIISVTVILISIVSFCLETLPVFRDENEDMHGSG 199
Query: 189 --HYKVFNTTTNGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVL 246
+Y N+T K TDPFF++ET I+ + L L ++ L
Sbjct: 200 GNYYSYPNSTVRFQKSN-----TFTDPFFIVETLCIIWFSFEFLVRFLACPSKAVFFTNL 254
Query: 247 IPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFER 306
+ I+ + + AE D + V+ + V
Sbjct: 255 MNIIDIVAIIPYFITLGTELAEKTEDGQQGQQAMSLAILRVIRLVRV------------- 301
Query: 307 GVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSE 365
R F L +S+ ++G+++ + + + + GV+LFSSAV+FAEA
Sbjct: 302 -------FRIFKLSRHSKGLQILGQTLNASMRELGLLIFFLFIGVILFSSAVFFAEADER 354
Query: 366 NSFFKSIPDAFWWAVVTMTTVGYGDM 391
+S F SIPDAFWWAVV+MTTVGYGDM
Sbjct: 355 DSQFPSIPDAFWWAVVSMTTVGYGDM 380
>sp|Q9I830|KCNA2_ONCMY Potassium voltage-gated channel subfamily A member 2
OS=Oncorhynchus mykiss GN=kcna2 PE=2 SV=1
Length = 494
Score = 344 bits (882), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 197/397 (49%), Positives = 247/397 (62%), Gaps = 42/397 (10%)
Query: 8 PPSHSQHYPGVDHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRY 67
P + +PG DH+ CERVVIN+SGLRFETQL+TL+QFP+TLLGDP +R+RY
Sbjct: 8 PSDEAAAHPGNPAEYDPDADHECCERVVINISGLRFETQLKTLSQFPDTLLGDPKKRMRY 67
Query: 68 FDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFRE 127
FDPLRNEYFFDR+R SFDAILY+YQSGGRLRRP NV LD+FSEEI+FYELGD A FRE
Sbjct: 68 FDPLRNEYFFDRSRTSFDAILYFYQSGGRLRRPANVTLDIFSEEIRFYELGDEAIELFRE 127
Query: 128 DEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEF 187
DEGF+KEEE+PLP +EFQR+VWLLFEYPESS AR++AIISV VIL+SIV FCLETLP F
Sbjct: 128 DEGFVKEEERPLPDNEFQRQVWLLFEYPESSGPARIIAIISVMVILISIVSFCLETLPIF 187
Query: 188 KH-----YKVFNTTTNGTKIEEDEVPDITDPFFLIETFLI-------MPSLYCLLTSLLL 235
++ + VF+T TN T TDPFF++ET I + L+ +
Sbjct: 188 RNDDDEPHSVFDTNTNTTIYFTSTY--FTDPFFILETLCIIWFSFEFLVRLFACPSKSGF 245
Query: 236 YSVVMIYVHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGY 295
+ VM + V+ I +I L AE D + V+ + V
Sbjct: 246 FGNVMNIIDVVAIIPYFITLATEL-------AEKPEDGQAGQQAMSLAILRVIRLVRV-- 296
Query: 296 GDMRCGAFFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFS 354
R F L +S+ ++G+++ + + + + GV+LFS
Sbjct: 297 ------------------FRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFS 338
Query: 355 SAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
SAVYFAEA S F+SIPDAFWWAVV+MTTVGYGDM
Sbjct: 339 SAVYFAEADEPESQFESIPDAFWWAVVSMTTVGYGDM 375
>sp|Q28293|KCNA2_CANFA Potassium voltage-gated channel subfamily A member 2 OS=Canis
familiaris GN=KCNA2 PE=2 SV=1
Length = 499
Score = 343 bits (880), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/399 (49%), Positives = 247/399 (61%), Gaps = 50/399 (12%)
Query: 9 PSHSQHYPGVDHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYF 68
P H Q D ++P DH+ CERVV N+SGLRFETQL+TL QFPETLLGDP +R+R+F
Sbjct: 16 PGHPQ-----DTYDP-EADHECCERVVTNISGLRFETQLKTLAQFPETLLGDPKKRMRFF 69
Query: 69 DPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFRED 128
DPLRNE FF RNRPSFDAILYYYQSGGRLRRPVNVPLD+FSEEI+FYELG+ A FRED
Sbjct: 70 DPLRNEIFFVRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFRED 129
Query: 129 EGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFK 188
EG+IKEEE+PLP +EFQR+VWLLFEYPESS AR++AI+SV VIL+SIV FCLETLP F+
Sbjct: 130 EGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFR 189
Query: 189 HYK--------VFNTTTNGTKIEEDEVPDITDPFFLIETFLI-------MPSLYCLLTSL 233
F+T +N T I + TDPFF++ET I + + +
Sbjct: 190 DENEDMHGGGVTFHTYSNST-IGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKA 248
Query: 234 LLYSVVMIYVHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTV 293
++ +M + ++ I +I G L AE D + V+ + V
Sbjct: 249 GFFTNIMNIIDIVAIIPYFITLGTEL-------AEKPEDAQQGQQAMSLAILRVIRLVRV 301
Query: 294 GYGDMRCGAFFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVL 352
R F L +S+ ++G+++ + + + + GV+L
Sbjct: 302 --------------------FRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVIL 341
Query: 353 FSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
FSSAVYFAEA S F SIPDAFWWAVV+MTTVGYGDM
Sbjct: 342 FSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDM 380
>sp|P15385|KCNA4_RAT Potassium voltage-gated channel subfamily A member 4 OS=Rattus
norvegicus GN=Kcna4 PE=1 SV=1
Length = 655
Score = 328 bits (841), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 185/385 (48%), Positives = 241/385 (62%), Gaps = 49/385 (12%)
Query: 29 DFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAIL 88
D CERVVINVSGLRFETQ++TL QFPETLLGDP +R +YFDPLRNEYFFDRNRPSFDAIL
Sbjct: 175 DCCERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFFDRNRPSFDAIL 234
Query: 89 YYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEE-KPLPSHEFQRK 147
YYYQSGGRL+RPVNVP D+F+EE+KFY+LG+ A KFREDEGF++EEE + LP +EF+++
Sbjct: 235 YYYQSGGRLKRPVNVPFDIFTEEVKFYQLGEEALLKFREDEGFVREEEDRALPENEFKKQ 294
Query: 148 VWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFK-------------HYKVFN 194
+WLLFEYPESS AR +AI+SV VIL+SIVIFCLETLPEF+ H ++ N
Sbjct: 295 IWLLFEYPESSSPARGIAIVSVLVILISIVIFCLETLPEFRDDRDLIMALSAGGHSRLLN 354
Query: 195 TTTNGTKIEEDEVPDITDPFFLIETFLI-------MPSLYCLLTSLLLYSVVMIYVHVLI 247
T+ +E DPFF++ET I + + + L + +M + ++
Sbjct: 355 DTS-APHLENSGHTIFNDPFFIVETVCIVWFSFEFVVRCFACPSQALFFKNIMNIIDIVS 413
Query: 248 PILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERG 307
+ +I G L A A +A++ + +R F
Sbjct: 414 ILPYFITLGTDL---------AQQQGGGNGQQQQAMSFAILRI-------IRLVRVF--- 454
Query: 308 VFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSEN 366
R F L +S+ ++G ++ + + + + GV+LFSSAVYFAEA
Sbjct: 455 -------RIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAEADEPT 507
Query: 367 SFFKSIPDAFWWAVVTMTTVGYGDM 391
+ F+SIPDAFWWAVVTMTTVGYGDM
Sbjct: 508 THFQSIPDAFWWAVVTMTTVGYGDM 532
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMR 299
++ ++F GV+LFSS VYFAEA + F+SIPDAFWWAVVTMTTVGYGDM+
Sbjct: 483 LIFFLFIGVILFSSAVYFAEADEPTTHFQSIPDAFWWAVVTMTTVGYGDMK 533
>sp|Q61423|KCNA4_MOUSE Potassium voltage-gated channel subfamily A member 4 OS=Mus
musculus GN=Kcna4 PE=1 SV=2
Length = 654
Score = 328 bits (840), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 185/385 (48%), Positives = 241/385 (62%), Gaps = 49/385 (12%)
Query: 29 DFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAIL 88
D CERVVINVSGLRFETQ++TL QFPETLLGDP +R +YFDPLRNEYFFDRNRPSFDAIL
Sbjct: 174 DCCERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFFDRNRPSFDAIL 233
Query: 89 YYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEE-KPLPSHEFQRK 147
YYYQSGGRL+RPVNVP D+F+EE+KFY+LG+ A KFREDEGF++EEE + LP +EF+++
Sbjct: 234 YYYQSGGRLKRPVNVPFDIFTEEVKFYQLGEEALLKFREDEGFVREEEDRALPENEFKKQ 293
Query: 148 VWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFK-------------HYKVFN 194
+WLLFEYPESS AR +AI+SV VIL+SIVIFCLETLPEF+ H ++ N
Sbjct: 294 IWLLFEYPESSSPARGIAIVSVLVILISIVIFCLETLPEFRDDRDLIMALSAGGHSRLLN 353
Query: 195 TTTNGTKIEEDEVPDITDPFFLIETFLI-------MPSLYCLLTSLLLYSVVMIYVHVLI 247
T+ +E DPFF++ET I + + + L + +M + ++
Sbjct: 354 DTS-APHLENSGHTIFNDPFFIVETVCIVWFSFEFVVRCFACPSQALFFKNIMNIIDIVS 412
Query: 248 PILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERG 307
+ +I G L A A +A++ + +R F
Sbjct: 413 ILPYFITLGTDL---------AQQQGGGNGQQQQAMSFAILRI-------IRLVRVF--- 453
Query: 308 VFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSEN 366
R F L +S+ ++G ++ + + + + GV+LFSSAVYFAEA
Sbjct: 454 -------RIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAEADEPT 506
Query: 367 SFFKSIPDAFWWAVVTMTTVGYGDM 391
+ F+SIPDAFWWAVVTMTTVGYGDM
Sbjct: 507 THFQSIPDAFWWAVVTMTTVGYGDM 531
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMR 299
++ ++F GV+LFSS VYFAEA + F+SIPDAFWWAVVTMTTVGYGDM+
Sbjct: 482 LIFFLFIGVILFSSAVYFAEADEPTTHFQSIPDAFWWAVVTMTTVGYGDMK 532
>sp|P79197|KCNA5_MUSPF Potassium voltage-gated channel subfamily A member 5 OS=Mustela
putorius furo GN=KCNA5 PE=2 SV=1
Length = 601
Score = 327 bits (838), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 187/383 (48%), Positives = 237/383 (61%), Gaps = 40/383 (10%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
+RV+IN+SGLRFETQL TL QFP TLLGDPA+R+RYFDPLRNEYFFDRNRPSFD ILYYY
Sbjct: 109 QRVLINISGLRFETQLGTLAQFPNTLLGDPAKRLRYFDPLRNEYFFDRNRPSFDGILYYY 168
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEEKPLPSHEFQRKVWLL 151
QSGGRLRRPVNV LDVF++EI+FY+LGD A +FREDEGFIKEEEKPLP +EFQR+VWL+
Sbjct: 169 QSGGRLRRPVNVSLDVFADEIRFYQLGDEAMERFREDEGFIKEEEKPLPRNEFQRQVWLI 228
Query: 152 FEYPESSQAARVVAIISVFVILLSIVIFCLETLPEF-------KHYKVFNTTTNGTKIEE 204
FEYPESS +AR +AI+SV VIL+SI+ FCLETLPEF +H V + ++
Sbjct: 229 FEYPESSGSARGIAIVSVLVILISIITFCLETLPEFRDERELLRHPPVPHQPLGPSRGAN 288
Query: 205 DEVP---------------DITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPI 249
P + DPFF++ET ++ + LL +
Sbjct: 289 GSGPLAPPSGPTVAPLLPRTLADPFFIVETTCVIWFTFELLVRFFACPSKAEFSRN---- 344
Query: 250 LMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGVF 309
+M I V +F YF G++ + M+ +R F
Sbjct: 345 IMNIIDVVAIFP---YFITLGTELAEQPGGGGGGQNGQQAMSLAILRVIRLVRVF----- 396
Query: 310 CRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSF 368
R F L +S+ ++GK++ + + + + GV+LFSSAVYFAEA ++ +
Sbjct: 397 -----RIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADNQETH 451
Query: 369 FKSIPDAFWWAVVTMTTVGYGDM 391
F SIPDAFWWAVVTMTTVGYGDM
Sbjct: 452 FSSIPDAFWWAVVTMTTVGYGDM 474
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMR 299
++ ++F GV+LFSS VYFAEA + ++ F SIPDAFWWAVVTMTTVGYGDMR
Sbjct: 425 LIFFLFIGVILFSSAVYFAEADNQETHFSSIPDAFWWAVVTMTTVGYGDMR 475
>sp|Q05037|KCNA4_BOVIN Potassium voltage-gated channel subfamily A member 4 OS=Bos taurus
GN=KCNA4 PE=2 SV=1
Length = 660
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/384 (47%), Positives = 241/384 (62%), Gaps = 47/384 (12%)
Query: 29 DFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAIL 88
D CERVVINVSGLRFETQ++TL QFPETLLGDP +R +YFDPLRNEYFFDRNRPSFDAIL
Sbjct: 181 DCCERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFFDRNRPSFDAIL 240
Query: 89 YYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEE-KPLPSHEFQRK 147
YYYQSGGRL+RPVNVP D+F+EE+KFY+LG+ A KFREDEGF++EEE + LP +EF+++
Sbjct: 241 YYYQSGGRLKRPVNVPFDIFTEEVKFYQLGEEALLKFREDEGFVREEEDRALPENEFKKQ 300
Query: 148 VWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYK----VFNTTTNGTKIE 203
+WLLFEYPESS AR +AI+SV VIL+SIVIFCLETLPEF+ + +T +G +
Sbjct: 301 IWLLFEYPESSSPARGIAIVSVLVILISIVIFCLETLPEFRDDRDLIMALSTGGHGGLLN 360
Query: 204 EDEVPD--------ITDPFFLIETFLI-------MPSLYCLLTSLLLYSVVMIYVHVLIP 248
+ P DPFF++ET I + + + L + +M + ++
Sbjct: 361 DTSAPHPENSGHTIFNDPFFIVETVCIVWFSFEFVVRCFACPSQALFFKNIMNIIDIVSI 420
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGV 308
+ +I G L A A +A++ + +R F
Sbjct: 421 LPYFITLGTDL---------AQQQGGGNGQQQQAMSFAILRI-------IRLVRVF---- 460
Query: 309 FCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENS 367
R F L +S+ ++G ++ + + + + GV+LFSSAVYFAEA +
Sbjct: 461 ------RIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAEADEPTT 514
Query: 368 FFKSIPDAFWWAVVTMTTVGYGDM 391
F+SIPDAFWWAVVTMTTVGYGDM
Sbjct: 515 HFQSIPDAFWWAVVTMTTVGYGDM 538
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMR 299
++ ++F GV+LFSS VYFAEA + F+SIPDAFWWAVVTMTTVGYGDM+
Sbjct: 489 LIFFLFIGVILFSSAVYFAEADEPTTHFQSIPDAFWWAVVTMTTVGYGDMK 539
>sp|Q28527|KCNA4_MUSPF Potassium voltage-gated channel subfamily A member 4 OS=Mustela
putorius furo GN=KCNA4 PE=2 SV=1
Length = 654
Score = 327 bits (837), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/382 (48%), Positives = 238/382 (62%), Gaps = 43/382 (11%)
Query: 29 DFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAIL 88
D CERVVINVSGLRFETQ++TL QFPETLLGDP +R +YFDPLRNEYFFDRNRPSFDAIL
Sbjct: 174 DCCERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFFDRNRPSFDAIL 233
Query: 89 YYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEE-KPLPSHEFQRK 147
YYYQSGGRL+RPVNVP D+F+EE+KFY+LG+ A KFREDEGF++EEE + LP +EF+++
Sbjct: 234 YYYQSGGRLKRPVNVPFDIFTEEVKFYQLGEEALLKFREDEGFVREEEDRALPENEFKKQ 293
Query: 148 VWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFK-------------HYKVFN 194
+WLLFEYPESS AR +AI+SV VIL+SIVIFCLETLPEF+ H + N
Sbjct: 294 IWLLFEYPESSSPARGIAIVSVLVILISIVIFCLETLPEFRDDRDLIMALSAGGHSGLLN 353
Query: 195 TTTNGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYIF 254
T+ +E DPFF++ET I + +S + P F
Sbjct: 354 DTS-APHLENSGHTIFNDPFFIVETVCI-----------VWFSFEFVVRCFACPSQALFF 401
Query: 255 AGVV----LFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGVFC 310
++ + S YF G+D + + + ++ + R +
Sbjct: 402 KNIMNIIDIVSILPYFITLGTDLAQQQGGGNGQQQQAMSFAIL------------RIIRL 449
Query: 311 RSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFF 369
R F L +S+ ++G ++ + + + + GV+LFSSAVYFAEA + F
Sbjct: 450 VRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAEADEPTTHF 509
Query: 370 KSIPDAFWWAVVTMTTVGYGDM 391
+SIPDAFWWAVVTMTTVGYGDM
Sbjct: 510 QSIPDAFWWAVVTMTTVGYGDM 531
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMR 299
++ ++F GV+LFSS VYFAEA + F+SIPDAFWWAVVTMTTVGYGDM+
Sbjct: 482 LIFFLFIGVILFSSAVYFAEADEPTTHFQSIPDAFWWAVVTMTTVGYGDMK 532
>sp|P22459|KCNA4_HUMAN Potassium voltage-gated channel subfamily A member 4 OS=Homo
sapiens GN=KCNA4 PE=1 SV=2
Length = 653
Score = 326 bits (836), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 183/384 (47%), Positives = 241/384 (62%), Gaps = 47/384 (12%)
Query: 29 DFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAIL 88
D CERVVINVSGLRFETQ++TL QFPETLLGDP +R +YFDPLRNEYFFDRNRPSFDAIL
Sbjct: 173 DCCERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFFDRNRPSFDAIL 232
Query: 89 YYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEE-KPLPSHEFQRK 147
YYYQSGGRL+RPVNVP D+F+EE+KFY+LG+ A KFREDEGF++EEE + LP +EF+++
Sbjct: 233 YYYQSGGRLKRPVNVPFDIFTEEVKFYQLGEEALLKFREDEGFVREEEDRALPENEFKKQ 292
Query: 148 VWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYK----VFNTTTNGTKIE 203
+WLLFEYPESS AR +AI+SV VIL+SIVIFCLETLPEF+ + + +G +
Sbjct: 293 IWLLFEYPESSSPARGIAIVSVLVILISIVIFCLETLPEFRDDRDLVMALSAGGHGGLLN 352
Query: 204 EDEVPDI--------TDPFFLIETFLI-------MPSLYCLLTSLLLYSVVMIYVHVLIP 248
+ P + DPFF++ET I + + + L + +M + ++
Sbjct: 353 DTSAPHLENSGHTIFNDPFFIVETVCIVWFSFEFVVRCFACPSQALFFKNIMNIIDIVSI 412
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGV 308
+ +I G L A A +A++ + +R F
Sbjct: 413 LPYFITLGTDL---------AQQQGGGNGQQQQAMSFAILRI-------IRLVRVF---- 452
Query: 309 FCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENS 367
R F L +S+ ++G ++ + + + + GV+LFSSAVYFAEA +
Sbjct: 453 ------RIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAEADEPTT 506
Query: 368 FFKSIPDAFWWAVVTMTTVGYGDM 391
F+SIPDAFWWAVVTMTTVGYGDM
Sbjct: 507 HFQSIPDAFWWAVVTMTTVGYGDM 530
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMR 299
++ ++F GV+LFSS VYFAEA + F+SIPDAFWWAVVTMTTVGYGDM+
Sbjct: 481 LIFFLFIGVILFSSAVYFAEADEPTTHFQSIPDAFWWAVVTMTTVGYGDMK 531
>sp|P19024|KCNA5_RAT Potassium voltage-gated channel subfamily A member 5 OS=Rattus
norvegicus GN=Kcna5 PE=1 SV=1
Length = 602
Score = 325 bits (834), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/424 (45%), Positives = 247/424 (58%), Gaps = 64/424 (15%)
Query: 2 SQDEDGPPSHSQHYPGVDHFE--PIPHDHDFC--ERVVINVSGLRFETQLRTLNQFPETL 57
++DE+G + PG+ E P D +RV+IN+SGLRFETQL TL QFP TL
Sbjct: 82 AEDEEG-----EGDPGLGTVEEDQAPQDAGSLHHQRVLINISGLRFETQLGTLAQFPNTL 136
Query: 58 LGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYEL 117
LGDPA+R+ YFDPLRNEYFFDRNRPSFD ILYYYQSGGRLRRPVNV LDVF++EI+FY+L
Sbjct: 137 LGDPAKRLHYFDPLRNEYFFDRNRPSFDGILYYYQSGGRLRRPVNVSLDVFADEIRFYQL 196
Query: 118 GDVATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIV 177
GD A +FREDEGFIKEEEKPLP +EFQR+VWL+FEYPESS +AR +AI+SV VIL+SI+
Sbjct: 197 GDEAMERFREDEGFIKEEEKPLPRNEFQRQVWLIFEYPESSGSARAIAIVSVLVILISII 256
Query: 178 IFCLETLPEFKHYK----------------------VFNTTTNGTKIEEDEVPDITDPFF 215
FCLETLPEF+ + V ++G + + DPFF
Sbjct: 257 TFCLETLPEFRDERELLRHPPVPPQPPAPAPGINGSVSGALSSGPTVAPLLPRTLADPFF 316
Query: 216 LIE-------TFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYIFAGVVLFSSTVYFAE 268
++E TF ++ + + +M + V+ +I G L
Sbjct: 317 IVETTCVIWFTFELLVRFFACPSKAEFSRNIMNIIDVVAIFPYFITLGTELAEQQPGGGG 376
Query: 269 AGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGVFCRSRLRKFLLQEYSRCF-L 327
Q+ +I V+ + V R F L +S+ +
Sbjct: 377 QNGQQAMSLAI-----LRVIRLVRV--------------------FRIFKLSRHSKGLQI 411
Query: 328 VGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVG 387
+GK++ + + + + GV+LFSSAVYFAEA + S F SIPDAFWWAVVTMTTVG
Sbjct: 412 LGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADNHGSHFSSIPDAFWWAVVTMTTVG 471
Query: 388 YGDM 391
YGDM
Sbjct: 472 YGDM 475
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 48/66 (72%)
Query: 234 LLYSVVMIYVHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTV 293
+L + + L ++ ++F GV+LFSS VYFAEA + S F SIPDAFWWAVVTMTTV
Sbjct: 411 ILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADNHGSHFSSIPDAFWWAVVTMTTV 470
Query: 294 GYGDMR 299
GYGDMR
Sbjct: 471 GYGDMR 476
>sp|P22460|KCNA5_HUMAN Potassium voltage-gated channel subfamily A member 5 OS=Homo
sapiens GN=KCNA5 PE=1 SV=4
Length = 613
Score = 323 bits (829), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 185/383 (48%), Positives = 237/383 (61%), Gaps = 39/383 (10%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
+RV IN+SGLRFETQL TL QFP TLLGDPA+R+RYFDPLRNEYFFDRNRPSFD ILYYY
Sbjct: 120 QRVHINISGLRFETQLGTLAQFPNTLLGDPAKRLRYFDPLRNEYFFDRNRPSFDGILYYY 179
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEEKPLPSHEFQRKVWLL 151
QSGGRLRRPVNV LDVF++EI+FY+LGD A +FREDEGFIKEEEKPLP +EFQR+VWL+
Sbjct: 180 QSGGRLRRPVNVSLDVFADEIRFYQLGDEAMERFREDEGFIKEEEKPLPRNEFQRQVWLI 239
Query: 152 FEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVF-------------NTTTN 198
FEYPESS +AR +AI+SV VIL+SI+ FCLETLPEF+ + N
Sbjct: 240 FEYPESSGSARAIAIVSVLVILISIITFCLETLPEFRDERELLRHPPAPHQPPAPAPGAN 299
Query: 199 GTKIEEDE--------VP-DITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPI 249
G+ + +P + DPFF++ET ++ + LL +
Sbjct: 300 GSGVMAPPSGPTVAPLLPRTLADPFFIVETTCVIWFTFELLVRFFACPSKAGFSRN---- 355
Query: 250 LMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGVF 309
+M I V +F YF G++ + + ++ R +
Sbjct: 356 IMNIIDVVAIFP---YFITLGTELAEQQPGGGGGGQNGQQAMSLA---------ILRVIR 403
Query: 310 CRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSF 368
R F L +S+ ++GK++ + + + + GV+LFSSAVYFAEA ++ +
Sbjct: 404 LVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADNQGTH 463
Query: 369 FKSIPDAFWWAVVTMTTVGYGDM 391
F SIPDAFWWAVVTMTTVGYGDM
Sbjct: 464 FSSIPDAFWWAVVTMTTVGYGDM 486
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMR 299
++ ++F GV+LFSS VYFAEA + + F SIPDAFWWAVVTMTTVGYGDMR
Sbjct: 437 LIFFLFIGVILFSSAVYFAEADNQGTHFSSIPDAFWWAVVTMTTVGYGDMR 487
>sp|P50638|KCNA5_RABIT Potassium voltage-gated channel subfamily A member 5 OS=Oryctolagus
cuniculus GN=KCNA5 PE=2 SV=1
Length = 598
Score = 323 bits (827), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/384 (47%), Positives = 238/384 (61%), Gaps = 40/384 (10%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
+RV+IN+SGLRFETQL TL QFP TLLGDPA+R+RYFDPLRNEYFFDRNRPSFD ILYYY
Sbjct: 104 QRVLINISGLRFETQLGTLAQFPNTLLGDPAKRLRYFDPLRNEYFFDRNRPSFDGILYYY 163
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEEKPLPSHEFQRKVWLL 151
QSGGRLRRPVNV LDVF++EI+FY+LGD A +FREDEGFIK+EEKPLP +EFQR+VWL+
Sbjct: 164 QSGGRLRRPVNVSLDVFADEIRFYQLGDEAMERFREDEGFIKDEEKPLPRNEFQRQVWLI 223
Query: 152 FEYPESSQAARVVAIISVFVILLSIVIFCLETLPEF-------KHYKVFN---------- 194
FEYPESS +AR +AI+SV VIL+SI+ FCLETLPEF +H V +
Sbjct: 224 FEYPESSGSARAIAIVSVLVILISIITFCLETLPEFKDERELLRHPPVPHQPPAAPALGA 283
Query: 195 ------TTTNGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIP 248
+G+ + + DPFF++ET ++ + LL + +
Sbjct: 284 NGSGAVAPASGSTVAPLLPRTLADPFFIVETTCVIWFTFELLVRFFACPSKAEFSRNI-- 341
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGV 308
M I V +F YF G++ + + ++ R +
Sbjct: 342 --MNIIDIVAIFP---YFITLGTELAEQQPGGGGGGQNGQQAMSLA---------ILRVI 387
Query: 309 FCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENS 367
R F L +S+ ++GK++ + + + + GV+LFSSAVYFAEA ++ +
Sbjct: 388 RLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADNQGT 447
Query: 368 FFKSIPDAFWWAVVTMTTVGYGDM 391
F SIPDAFWWAVVTMTTVGYGDM
Sbjct: 448 HFSSIPDAFWWAVVTMTTVGYGDM 471
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMR 299
++ ++F GV+LFSS VYFAEA + + F SIPDAFWWAVVTMTTVGYGDMR
Sbjct: 422 LIFFLFIGVILFSSAVYFAEADNQGTHFSSIPDAFWWAVVTMTTVGYGDMR 472
>sp|Q61923|KCNA6_MOUSE Potassium voltage-gated channel subfamily A member 6 OS=Mus
musculus GN=Kcna6 PE=1 SV=1
Length = 529
Score = 313 bits (803), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/401 (47%), Positives = 238/401 (59%), Gaps = 54/401 (13%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
ER+VIN+SGLRFETQLRTL+ FP+TLLGDP RR+R+FDPLRNEYFFDRNRPSFDAILYYY
Sbjct: 41 ERLVINISGLRFETQLRTLSLFPDTLLGDPGRRVRFFDPLRNEYFFDRNRPSFDAILYYY 100
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFI---KEEEKPLPSHEFQRKV 148
QSGGRLRRPVNVPLD+F EEI+FY+LG+ A FREDEG + E+EKPLPS FQR+V
Sbjct: 101 QSGGRLRRPVNVPLDIFMEEIRFYQLGEEALAAFREDEGCLPEGGEDEKPLPSQPFQRQV 160
Query: 149 WLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFK-HYKVFNTTTNGTKIE---- 203
WLLFEYPESS AR +AI+SV VIL+SIVIFCLETLP+F+ + + +GT++
Sbjct: 161 WLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPQFRADGRGGSNEGSGTRLSPASR 220
Query: 204 --------------EDEVPD------------------ITDPFFLIETFLIMPSLYCLLT 231
+P TDPFFL+ET I+ + LL
Sbjct: 221 SHEEEDEDEDSYAFPGSIPSGGLGTGGTSSLSTLGGSFFTDPFFLVETLCIVWFTFELLV 280
Query: 232 SLLLYSVVMIYVHVLIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMT 291
+ +M I V +F YF G++ + V+
Sbjct: 281 RFSACPSKAAFFRN----IMNIIDLVAIFP---YFITLGTE------LVQRHEQQSVSGG 327
Query: 292 TVGYGDMRCGAFFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGV 350
+ G R + R F L +S+ ++GK++ + + + + GV
Sbjct: 328 SGQNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGV 387
Query: 351 VLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
+LFSSAVYFAEA +S F SIPDAFWWAVVTMTTVGYGDM
Sbjct: 388 ILFSSAVYFAEADDVDSLFPSIPDAFWWAVVTMTTVGYGDM 428
>sp|P17659|KCNA6_RAT Potassium voltage-gated channel subfamily A member 6 OS=Rattus
norvegicus GN=Kcna6 PE=2 SV=1
Length = 530
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/410 (46%), Positives = 242/410 (59%), Gaps = 71/410 (17%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
ER+VIN+SGLR+ETQLRTL+ FP+TLLGDP RR+R+FDPLRNEYFFDRNRPSFDAILYYY
Sbjct: 41 ERLVINISGLRYETQLRTLSLFPDTLLGDPGRRVRFFDPLRNEYFFDRNRPSFDAILYYY 100
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFI---KEEEKPLPSHEFQRKV 148
QSGGRLRRPVNVPLD+F EEI+FY+LGD A FREDEG + E+EKPLPS FQR+V
Sbjct: 101 QSGGRLRRPVNVPLDIFMEEIRFYQLGDEALAAFREDEGCLPEGGEDEKPLPSQPFQRQV 160
Query: 149 WLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFK-HYKVFNTTTNGTKIE---- 203
WLLFEYPESS AR +AI+SV VIL+SIVIFCLETLP+F+ + + +GT++
Sbjct: 161 WLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPQFRADGRGGSNEGSGTRMSPASR 220
Query: 204 ---------------EDEVPD------------------ITDPFFLIETFLIMPSLYCLL 230
+P TDPFFL+ET I+ + LL
Sbjct: 221 GSHEEEDEDEDSYAFPGSIPSGGLGTGGTSSFSTLGGSFFTDPFFLVETLCIVWFTFELL 280
Query: 231 -------TSLLLYSVVMIYVHVLIPILMYIFAGVVLFSS-TVYFAEAGSDQSFFKSIPDA 282
+ + +M + ++ +I G L GS Q+ +++ A
Sbjct: 281 VRFSACPSKAAFFRNIMNIIDLVAIFPYFITLGTELVQRHEQQPVSGGSGQNRQQAMSLA 340
Query: 283 FWWAVVTMTTVGYGDMRCGAFFERGVFCRSRLRKFLLQEYSRCF-LVGKSIPDAFWWAVV 341
V+ + V R F L +S+ ++GK++ + +
Sbjct: 341 I-LRVIRLVRV--------------------FRIFKLSRHSKGLQILGKTLQASMRELGL 379
Query: 342 TMTTVGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
+ + GV+LFSSAVYFAEA +S F SIPDAFWWAVVTMTTVGYGDM
Sbjct: 380 LIFFLFIGVILFSSAVYFAEADDVDSLFPSIPDAFWWAVVTMTTVGYGDM 429
>sp|Q7T199|KCA10_CHICK Potassium voltage-gated channel subfamily A member 10 OS=Gallus
gallus GN=KCNA10 PE=2 SV=1
Length = 516
Score = 303 bits (775), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/368 (47%), Positives = 235/368 (63%), Gaps = 34/368 (9%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
+RV+IN++GLRFET+L+TLNQFPETLLGDP +R+RYFD +RNEYFFDRNRPSFD ILYYY
Sbjct: 91 QRVIINIAGLRFETRLKTLNQFPETLLGDPEKRMRYFDSMRNEYFFDRNRPSFDGILYYY 150
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEEKPLPSHEFQRKVWLL 151
QSGG++RRP NVP+DVF++EI FYELGD A ++FREDEGFIK+ E LP+++F R+ WLL
Sbjct: 151 QSGGKIRRPANVPIDVFADEITFYELGDEAMDQFREDEGFIKDPETLLPTNDFHRQFWLL 210
Query: 152 FEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEV---P 208
FEYPESS AAR VA++SV VI++SI+IFC+ETLPEF+ + + +T +K D +
Sbjct: 211 FEYPESSSAARGVALVSVLVIVISIIIFCMETLPEFREEREYKSTQELSKNTTDTLLAHS 270
Query: 209 DITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYIFAGVVLFSSTVYFAE 268
TDPFF+IET I + +S + ++ P S T +F
Sbjct: 271 TFTDPFFVIETACI-----------IWFSFELFVRFIVCP------------SKTEFFKN 307
Query: 269 AGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGVFCRSRL----RKFLLQEYSR 324
+ IP ++ +T + ++ + RL R F L +S+
Sbjct: 308 IMNIIDIVSIIP---YFVTLTTELIQQSELNGQQNMSLAILRIIRLVRVFRIFKLSRHSK 364
Query: 325 CF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTM 383
++G+++ + + + + GV+LFSSAVYFAE S F SIPD FWWAVVTM
Sbjct: 365 GLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPQSHFSSIPDGFWWAVVTM 424
Query: 384 TTVGYGDM 391
TTVGYGDM
Sbjct: 425 TTVGYGDM 432
>sp|Q9I829|KCNA1_ONCMY Shaker-related potassium channel tsha2 OS=Oncorhynchus mykiss PE=2
SV=1
Length = 483
Score = 300 bits (768), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/380 (48%), Positives = 242/380 (63%), Gaps = 46/380 (12%)
Query: 27 DHDFCERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDA 86
D + ERVVIN+SGLRFETQLRTL++FP TLLGDP +R+R+FDPLRNEYFFDRNRPSFDA
Sbjct: 29 DQECSERVVINISGLRFETQLRTLSRFPTTLLGDPRKRMRFFDPLRNEYFFDRNRPSFDA 88
Query: 87 ILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEEKPLPSHEFQR 146
ILYYYQSGG+LRRPVNV +D+F EE+ FYE+ + A + F+EDEG I E E+ +P +EFQR
Sbjct: 89 ILYYYQSGGKLRRPVNVTMDIFMEEMTFYEIEEEAIDMFKEDEGMIIEVERAMPDNEFQR 148
Query: 147 KVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNT------TTNGT 200
++WLLFEYPESS AR++A++SV VI++SIVIFCLETLP+F+ N TTNGT
Sbjct: 149 QLWLLFEYPESSGPARMIAVVSVSVIVISIVIFCLETLPQFREDTSANLPLSNHHTTNGT 208
Query: 201 KIEEDEVPDI-TDPFFLIETFLIMPSLYCLLTSLL-------LYSVVMIYVHVLIPILMY 252
+ + P++ TDPFF++ET I+ + L L + M + +L +
Sbjct: 209 TLHKK--PNLFTDPFFMVETLCIVWFSFEFLVRFLSCPSKPAFFKNAMNSIDILAIAPYF 266
Query: 253 IFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGVFCRS 312
I G+ L EAGS+Q+ +I V+ + V
Sbjct: 267 ITLGLELAEQ----QEAGSEQAMSLAI-----LRVIRLVRV------------------- 298
Query: 313 RLRKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFKS 371
R F L +S+ ++G+++ + + + + GV+LFSSAVYFAEA S F S
Sbjct: 299 -FRIFKLSRHSKGLQILGQTLHASISELGLLIFFLLIGVILFSSAVYFAEADDPESGFSS 357
Query: 372 IPDAFWWAVVTMTTVGYGDM 391
IP AFWWAVV+MTTVGYGDM
Sbjct: 358 IPAAFWWAVVSMTTVGYGDM 377
>sp|Q16322|KCA10_HUMAN Potassium voltage-gated channel subfamily A member 10 OS=Homo
sapiens GN=KCNA10 PE=1 SV=2
Length = 511
Score = 275 bits (703), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 169/369 (45%), Positives = 231/369 (62%), Gaps = 36/369 (9%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
+RV+IN++GLRFETQLRTL+QFPETLLGD +R+++FD +RNEYFFDRNRPSFD ILYYY
Sbjct: 86 QRVIINIAGLRFETQLRTLSQFPETLLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYY 145
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEEKPLPSHEFQRKVWLL 151
QSGG++RRP NVP+D+F++EI FYELG A ++FREDEGFIK+ E LP+++ R+ WLL
Sbjct: 146 QSGGKIRRPANVPIDIFADEISFYELGSEAMDQFREDEGFIKDPETLLPTNDIHRQFWLL 205
Query: 152 FEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYK----VFNTTTNGTKIEEDEV 207
FEYPESS AAR VA++SV V+++SI IFCLETLPEF+ + V + N +K +
Sbjct: 206 FEYPESSSAARAVAVVSVLVVVISITIFCLETLPEFREDRELKVVRDPNLNMSKTVLSQT 265
Query: 208 PDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYIFAGVVLFSSTVYFA 267
TDPFF++E+ T ++ ++ ++ V+ P S T +F
Sbjct: 266 M-FTDPFFMVES-----------TCIVWFTFELVLRFVVCP------------SKTDFFR 301
Query: 268 EAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGVFCRSRL----RKFLLQEYS 323
+ IP ++A + V + + RL R F L +S
Sbjct: 302 NIMNIIDIISIIP---YFATLITELVQETEPSAQQNMSLAILRIIRLVRVFRIFKLSRHS 358
Query: 324 RCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVT 382
+ ++G+++ + + + + GV+LFSSAVYFAE S F SIPD FWWAVVT
Sbjct: 359 KGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEVDEPESHFSSIPDGFWWAVVT 418
Query: 383 MTTVGYGDM 391
MTTVGYGDM
Sbjct: 419 MTTVGYGDM 427
>sp|Q61762|KCNA5_MOUSE Potassium voltage-gated channel subfamily A member 5 OS=Mus
musculus GN=Kcna5 PE=2 SV=2
Length = 602
Score = 271 bits (694), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/194 (68%), Positives = 157/194 (80%), Gaps = 9/194 (4%)
Query: 2 SQDEDGPPSHSQHYPGVDHFE--PIPHDHDFC--ERVVINVSGLRFETQLRTLNQFPETL 57
++DE+G + PG+ E P D +RV+IN+SGLRFETQL TL QFP TL
Sbjct: 82 AEDEEG-----EGDPGLGTVEEDQAPQDSGSLHHQRVLINISGLRFETQLGTLAQFPNTL 136
Query: 58 LGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYEL 117
LGDP +R+RYFDPLRNEYFFDRNRPSFD ILYYYQSGGRLRRPVNV LDVF++EI+FY+L
Sbjct: 137 LGDPVKRLRYFDPLRNEYFFDRNRPSFDGILYYYQSGGRLRRPVNVSLDVFADEIRFYQL 196
Query: 118 GDVATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIV 177
GD A +FREDEGFIKEEEKPLP +EFQR+VWL+FEYPESS +AR +AI+SV VIL+SI+
Sbjct: 197 GDEAMERFREDEGFIKEEEKPLPRNEFQRQVWLIFEYPESSGSARAIAIVSVLVILISII 256
Query: 178 IFCLETLPEFKHYK 191
FCLETLPEF+ +
Sbjct: 257 TFCLETLPEFRDER 270
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 43/51 (84%)
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMR 299
++ ++F GV+LFSS VYFAEA + S F SIPDAFWWAVVTMTTVGYGDMR
Sbjct: 426 LIFFLFIGVILFSSAVYFAEADNQGSHFSSIPDAFWWAVVTMTTVGYGDMR 476
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 315 RKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFKSIP 373
R F L +S+ ++GK++ + + + + GV+LFSSAVYFAEA ++ S F SIP
Sbjct: 398 RIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADNQGSHFSSIP 457
Query: 374 DAFWWAVVTMTTVGYGDM 391
DAFWWAVVTMTTVGYGDM
Sbjct: 458 DAFWWAVVTMTTVGYGDM 475
>sp|Q96RP8|KCNA7_HUMAN Potassium voltage-gated channel subfamily A member 7 OS=Homo
sapiens GN=KCNA7 PE=2 SV=1
Length = 456
Score = 262 bits (669), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 167/373 (44%), Positives = 225/373 (60%), Gaps = 38/373 (10%)
Query: 34 VVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYYQS 93
+V+NV+GLRFET+ RTL +FP+TLLGDPARR R++D R EYFFDR+RPSFDA+LYYYQS
Sbjct: 15 LVLNVAGLRFETRARTLGRFPDTLLGDPARRGRFYDDARREYFFDRHRPSFDAVLYYYQS 74
Query: 94 GGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFE 153
GGRLRRP +VPLDVF EE+ FY LG A + REDEG E+PLP F R++WLLFE
Sbjct: 75 GGRLRRPAHVPLDVFLEEVAFYGLGAAALARLREDEGCPVPPERPLPRRAFARQLWLLFE 134
Query: 154 YPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYK------------VFNTTTNGTK 201
+PESSQAARV+A++SV VIL+SIV+FCLETLP+F+ + F NG+
Sbjct: 135 FPESSQAARVLAVVSVLVILVSIVVFCLETLPDFRDDRDGTGLAAAAAAGPFPAPLNGSS 194
Query: 202 IEEDEVPDI--TDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYIFAGVVL 259
P + DPFF++ET I + LL LL+ I+ ++ ++ ++
Sbjct: 195 QMPGNPPRLPFNDPFFVVETLCICWFSFELLVRLLVCPSKAIFFKNVMNLIDFV------ 248
Query: 260 FSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGVFCRSRLRKFLL 319
+ YF G++ + + G G R + R F L
Sbjct: 249 -AILPYFVALGTELARQR----------------GVGQQAMSLAILRVIRLVRVFRIFKL 291
Query: 320 QEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWW 378
+S+ ++G+++ + + + + GVVLFSSAVYFAE +S F SIP++FWW
Sbjct: 292 SRHSKGLQILGQTLRASMRELGLLIFFLFIGVVLFSSAVYFAEVDRVDSHFTSIPESFWW 351
Query: 379 AVVTMTTVGYGDM 391
AVVTMTTVGYGDM
Sbjct: 352 AVVTMTTVGYGDM 364
>sp|P17658|KCNA6_HUMAN Potassium voltage-gated channel subfamily A member 6 OS=Homo
sapiens GN=KCNA6 PE=1 SV=1
Length = 529
Score = 261 bits (667), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 125/160 (78%), Positives = 142/160 (88%), Gaps = 3/160 (1%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
ER+VIN+SGLRFETQLRTL+ FP+TLLGDP RR+R+FDPLRNEYFFDRNRPSFDAILYYY
Sbjct: 41 ERLVINISGLRFETQLRTLSLFPDTLLGDPGRRVRFFDPLRNEYFFDRNRPSFDAILYYY 100
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFI---KEEEKPLPSHEFQRKV 148
QSGGRLRRPVNVPLD+F EEI+FY+LGD A FREDEG + E+EKPLPS FQR+V
Sbjct: 101 QSGGRLRRPVNVPLDIFLEEIRFYQLGDEALAAFREDEGCLPEGGEDEKPLPSQPFQRQV 160
Query: 149 WLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFK 188
WLLFEYPESS AR +AI+SV VIL+SIVIFCLETLP+F+
Sbjct: 161 WLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPQFR 200
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 42/50 (84%)
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDM 298
++ ++F GV+LFSS VYFAEA D S F SIPDAFWWAVVTMTTVGYGDM
Sbjct: 379 LIFFLFIGVILFSSAVYFAEADDDDSLFPSIPDAFWWAVVTMTTVGYGDM 428
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 315 RKFLLQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFKSIP 373
R F L +S+ ++GK++ + + + + GV+LFSSAVYFAEA ++S F SIP
Sbjct: 351 RIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADDDDSLFPSIP 410
Query: 374 DAFWWAVVTMTTVGYGDM 391
DAFWWAVVTMTTVGYGDM
Sbjct: 411 DAFWWAVVTMTTVGYGDM 428
>sp|Q17ST2|KCNA7_MOUSE Potassium voltage-gated channel subfamily A member 7 OS=Mus
musculus GN=Kcna7 PE=2 SV=2
Length = 489
Score = 252 bits (644), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 165/374 (44%), Positives = 211/374 (56%), Gaps = 39/374 (10%)
Query: 34 VVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYYQS 93
+V+NV+GLRFET+ RTL +FP+TLLGDP RR R++D R EYFFDR+RPSFDA+LYYYQS
Sbjct: 47 LVLNVAGLRFETRARTLGRFPDTLLGDPVRRSRFYDGARREYFFDRHRPSFDAVLYYYQS 106
Query: 94 GGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFE 153
GGRLRRP +VPLDVF EE+ FY LG A + REDEG E+PLP F R++WLLFE
Sbjct: 107 GGRLRRPAHVPLDVFLEEVSFYGLGAAALARLREDEGCAVPPERPLPRRAFARQLWLLFE 166
Query: 154 YPESSQAARVVAIISVFVILLSIVIFCLETL-------------PEFKHYKVFNTTTNGT 200
+PESSQAARV+A++SV VIL+SIV+FCLETL P F NG+
Sbjct: 167 FPESSQAARVLAVVSVLVILVSIVVFCLETLPDFRDDRDDPGLAPVAAATGPFLARLNGS 226
Query: 201 KIEEDEVPD--ITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYIFAGVV 258
P DPFF++ET I C + LL +V
Sbjct: 227 SPMPGAPPRQPFNDPFFVVETLCI-----CWFSFELLVRLVACP---------------- 265
Query: 259 LFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGVFCRSRLRKFL 318
S V+F + F +P G G R + R F
Sbjct: 266 --SKAVFFKNVMNLIDFVAILPYFVALGTELARQRGVGQPAMSLAILRVIRLVRVFRIFK 323
Query: 319 LQEYSRCF-LVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFKSIPDAFW 377
L +S+ ++G+++ + + + + GVVLFSSAVYFAE ++ F SIP++FW
Sbjct: 324 LSRHSKGLQILGQTLRASMRELGLLIFFLFIGVVLFSSAVYFAEVDRVDTHFTSIPESFW 383
Query: 378 WAVVTMTTVGYGDM 391
WAVVTMTTVGYGDM
Sbjct: 384 WAVVTMTTVGYGDM 397
>sp|Q09081|KCNA2_RABIT Potassium voltage-gated channel subfamily A member 2 (Fragment)
OS=Oryctolagus cuniculus GN=KCNA2 PE=2 SV=1
Length = 273
Score = 198 bits (504), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 118/148 (79%), Gaps = 6/148 (4%)
Query: 80 NRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFIKEEEKPL 139
NRPSFDAILYYYQSGGRLRRPVNVPLD+FSEEI+FYELG+ A FREDEG+IKEEE+PL
Sbjct: 1 NRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPL 60
Query: 140 PSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKH----YKVFNT 195
P +EFQR+VWLLFEYPESS AR++AI+SV VIL+SIV FCLETLP F+ + F+T
Sbjct: 61 PENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENDMHGTFHT 120
Query: 196 TTNGTKIEEDEVPDITDPFFLIETFLIM 223
+N T + TDPFF++ET I+
Sbjct: 121 YSNSTIGYQQ--TSFTDPFFIVETLCII 146
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 249 ILMYIFAGVVLFSSTVYFAEAGSDQSFFKS 278
++ ++F GV+LFSS VYFAE S F S
Sbjct: 244 LIFFLFIGVILFSSAVYFAEVDEPDSQFPS 273
>sp|Q8I4B0|KCNSK_CAEEL Potassium voltage-gated channel protein shk-1 OS=Caenorhabditis
elegans GN=shk-1 PE=2 SV=1
Length = 536
Score = 197 bits (502), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 201/380 (52%), Gaps = 41/380 (10%)
Query: 26 HDHDFCERVV-INVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPS- 83
H + +++V INVSG+RF+T TL+++P +LLGD +R +F NE+FFDR+R +
Sbjct: 126 QGHPYTDQIVTINVSGMRFQTFESTLSRYPNSLLGDRNKRQHFFVSDTNEFFFDRHRTTS 185
Query: 84 -----------FDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDVATNKFREDEGFI 132
F++ILY YQSGGR++RP VP+D+F +E++F+++GD +F EG+
Sbjct: 186 SSFTFEIRNYLFESILYIYQSGGRVKRPEIVPIDIFLKEMRFFQMGDDLLEEFWIAEGYE 245
Query: 133 KEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKV 192
K +E +P+++ QRK+W L EYP+SS +AR++A IS+ VI LSI+ FC ET+P K
Sbjct: 246 KPKEVMMPNNKTQRKIWELMEYPDSSLSARIIAFISIAVIALSIISFCWETVPSDIEEKP 305
Query: 193 FNTTTNGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMY 252
N + ++E + + PFF IE I L+ + +L + V +L
Sbjct: 306 INNSATAELLDEMDEKHYS-PFFWIELMCI---LWFTIELILRFISCPCKVTFATSVLNI 361
Query: 253 I-FAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDMRCGAFFERGVFCR 311
I F + F +FA+ S V G F R
Sbjct: 362 IDFVAIAPFFVNFFFADTSKSNSSMSFAVLRVLRLVRVFRVFKLSRHSVGLQILGKTF-R 420
Query: 312 SRLRKFLLQEYSRCFLVGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFKS 371
S +++F C L+ F+ A+ +VLF+S +YFAE G NS F S
Sbjct: 421 SSVQEF-------CLLI-------FFMAI--------ALVLFASGMYFAEQGEPNSKFTS 458
Query: 372 IPDAFWWAVVTMTTVGYGDM 391
IP +FW+ +VTMTTVGYGD+
Sbjct: 459 IPASFWFVLVTMTTVGYGDL 478
>sp|Q9MZ19|KCNB1_RABIT Potassium voltage-gated channel subfamily B member 1 OS=Oryctolagus
cuniculus GN=KCNB1 PE=2 SV=1
Length = 858
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 154/357 (43%), Gaps = 96/357 (26%)
Query: 33 RVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPL----------RNEYFFDRNRP 82
RV +NV GL E RTL++ P T LG R D L NEYFFDR+
Sbjct: 32 RVRLNVGGLAHEVLWRTLDRLPRTRLGK-LRDCNTHDSLLEVCDDYSLDDNEYFFDRHPG 90
Query: 83 SFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDV---------------------- 120
+F +IL +Y++G RL + FS+E+ ++ + ++
Sbjct: 91 AFTSILNFYRTG-RLHMMEEMCALSFSQELDYWGIDEIYLESCCQARYHQKKEQMNEELK 149
Query: 121 -ATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIF 179
RE EG EE E ++K+W L E P SS AA+++AIIS+ I+LS +
Sbjct: 150 REAETLREREG---EEFDNTCCAEKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIAL 206
Query: 180 CLETLPEFKHYKVFNTTTNGTKIEEDEVPDIT---------------------DPFFLIE 218
L TLPE + F TT+ ++ E I P I+
Sbjct: 207 SLNTLPELQSLDEFGQTTDNPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAID 266
Query: 219 TFLIMP---------SLYCLLTSLLLYSVVMIY-VHVLIPIL------------------ 250
I+P S +L + VV I+ + ++ IL
Sbjct: 267 LLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRR 326
Query: 251 ---------MYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDM 298
+++ G+++FSS V+FAE D + FKSIP +FWWA +TMTTVGYGD+
Sbjct: 327 SYNELGLLILFLAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDI 383
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 37/46 (80%)
Query: 346 VGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
+ G+++FSS V+FAE +++ FKSIP +FWWA +TMTTVGYGD+
Sbjct: 338 LAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDI 383
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 330 KSIPDAFWWAVVTMTTVGYGVV 351
KSIP +FWWA +TMTTVGYG +
Sbjct: 362 KSIPASFWWATITMTTVGYGDI 383
>sp|O18868|KCNB1_PIG Potassium voltage-gated channel subfamily B member 1 OS=Sus scrofa
GN=KCNB1 PE=2 SV=1
Length = 858
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 154/357 (43%), Gaps = 96/357 (26%)
Query: 33 RVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPL----------RNEYFFDRNRP 82
RV +NV GL E RTL++ P T LG R D L NEYFFDR+
Sbjct: 32 RVRLNVGGLAHEVLWRTLDRLPRTRLGK-LRDCNTHDSLLEVCDDYSLDDNEYFFDRHPG 90
Query: 83 SFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDV---------------------- 120
+F +IL +Y++G RL + FS+E+ ++ + ++
Sbjct: 91 AFTSILNFYRTG-RLHMMEEMCALSFSQELDYWGIDEIYLESCCQARYHQKKEQMNEELK 149
Query: 121 -ATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIF 179
RE EG EE E ++K+W L E P SS AA+++AIIS+ I+LS +
Sbjct: 150 REAETLREREG---EEFDNTCCAEKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIAL 206
Query: 180 CLETLPEFKHYKVFNTTTNGTKIEEDEVPDIT---------------------DPFFLIE 218
L TLPE + F TT+ ++ E I P I+
Sbjct: 207 SLNTLPELQSLDEFGQTTDNPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAID 266
Query: 219 TFLIMP---------SLYCLLTSLLLYSVVMIY-VHVLIPIL------------------ 250
I+P S +L + VV I+ + ++ IL
Sbjct: 267 LLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRR 326
Query: 251 ---------MYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDM 298
+++ G+++FSS V+FAE D + FKSIP +FWWA +TMTTVGYGD+
Sbjct: 327 SYNELGLLILFLAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDI 383
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 37/46 (80%)
Query: 346 VGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
+ G+++FSS V+FAE +++ FKSIP +FWWA +TMTTVGYGD+
Sbjct: 338 LAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDI 383
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 330 KSIPDAFWWAVVTMTTVGYGVV 351
KSIP +FWWA +TMTTVGYG +
Sbjct: 362 KSIPASFWWATITMTTVGYGDI 383
>sp|Q03717|KCNB1_MOUSE Potassium voltage-gated channel subfamily B member 1 OS=Mus
musculus GN=Kcnb1 PE=1 SV=2
Length = 857
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 154/357 (43%), Gaps = 96/357 (26%)
Query: 33 RVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPL----------RNEYFFDRNRP 82
RV +NV GL E RTL++ P T LG R D L NEYFFDR+
Sbjct: 32 RVRLNVGGLAHEVLWRTLDRLPRTRLGK-LRDCNTHDSLLQVCDDYSLEDNEYFFDRHPG 90
Query: 83 SFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDV---------------------- 120
+F +IL +Y++G RL + FS+E+ ++ + ++
Sbjct: 91 AFTSILNFYRTG-RLHMMEEMCALSFSQELDYWGIDEIYLESCCQARYHQKKEQMNEELK 149
Query: 121 -ATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIF 179
RE EG EE E ++K+W L E P SS AA+++AIIS+ I+LS +
Sbjct: 150 REAETLREREG---EEFDNTCCAEKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIAL 206
Query: 180 CLETLPEFKHYKVFNTTTNGTKIEEDEVPDIT---------------------DPFFLIE 218
L TLPE + F +T+ ++ E I P I+
Sbjct: 207 SLNTLPELQSLDEFGQSTDNPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAID 266
Query: 219 TFLIMP---------SLYCLLTSLLLYSVVMIY-VHVLIPIL------------------ 250
I+P S +L + VV I+ + ++ IL
Sbjct: 267 LLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRR 326
Query: 251 ---------MYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDM 298
+++ G+++FSS V+FAE D + FKSIP +FWWA +TMTTVGYGD+
Sbjct: 327 SYNELGLLILFLAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDI 383
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 37/46 (80%)
Query: 346 VGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
+ G+++FSS V+FAE +++ FKSIP +FWWA +TMTTVGYGD+
Sbjct: 338 LAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDI 383
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 330 KSIPDAFWWAVVTMTTVGYGVV 351
KSIP +FWWA +TMTTVGYG +
Sbjct: 362 KSIPASFWWATITMTTVGYGDI 383
>sp|Q14721|KCNB1_HUMAN Potassium voltage-gated channel subfamily B member 1 OS=Homo
sapiens GN=KCNB1 PE=1 SV=2
Length = 858
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 154/357 (43%), Gaps = 96/357 (26%)
Query: 33 RVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPL----------RNEYFFDRNRP 82
RV +NV GL E RTL++ P T LG R D L NEYFFDR+
Sbjct: 32 RVRLNVGGLAHEVLWRTLDRLPRTRLGK-LRDCNTHDSLLEVCDDYSLDDNEYFFDRHPG 90
Query: 83 SFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDV---------------------- 120
+F +IL +Y++G RL + FS+E+ ++ + ++
Sbjct: 91 AFTSILNFYRTG-RLHMMEEMCALSFSQELDYWGIDEIYLESCCQARYHQKKEQMNEELK 149
Query: 121 -ATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIF 179
RE EG EE E ++K+W L E P SS AA+++AIIS+ I+LS +
Sbjct: 150 REAETLREREG---EEFDNTCCAEKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIAL 206
Query: 180 CLETLPEFKHYKVFNTTTNGTKIEEDEVPDIT---------------------DPFFLIE 218
L TLPE + F +T+ ++ E I P I+
Sbjct: 207 SLNTLPELQSLDEFGQSTDNPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAID 266
Query: 219 TFLIMP---------SLYCLLTSLLLYSVVMIY-VHVLIPIL------------------ 250
I+P S +L + VV I+ + ++ IL
Sbjct: 267 LLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRR 326
Query: 251 ---------MYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDM 298
+++ G+++FSS V+FAE D + FKSIP +FWWA +TMTTVGYGD+
Sbjct: 327 SYNELGLLILFLAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDI 383
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 37/46 (80%)
Query: 346 VGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
+ G+++FSS V+FAE +++ FKSIP +FWWA +TMTTVGYGD+
Sbjct: 338 LAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDI 383
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 330 KSIPDAFWWAVVTMTTVGYGVV 351
KSIP +FWWA +TMTTVGYG +
Sbjct: 362 KSIPASFWWATITMTTVGYGDI 383
>sp|Q9NSA2|KCND1_HUMAN Potassium voltage-gated channel subfamily D member 1 OS=Homo
sapiens GN=KCND1 PE=1 SV=2
Length = 647
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 159/348 (45%), Gaps = 90/348 (25%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
E +V+NVSG RFET TL+++P+TLLG + ++D EYFFDR+ F +L +Y
Sbjct: 40 EVLVVNVSGRRFETWKNTLDRYPDTLLGSSEKEF-FYDADSGEYFFDRDPDMFRHVLNFY 98
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYEL-----GDVATNKFR-----------EDEGFIKEE 135
++ GRL P + F EE+ FY L GD ++R EDE +
Sbjct: 99 RT-GRLHCPRQECIQAFDEELAFYGLVPELVGDCCLEEYRDRKKENAERLAEDEEAEQAG 157
Query: 136 EKP-LPS-HEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVF 193
+ P LP+ ++++W FE P +S AA V ++ F I +S++ +ET+P
Sbjct: 158 DGPALPAGSSLRQRLWRAFENPHTSTAALVFYYVTGFFIAVSVIANVVETIP-------C 210
Query: 194 NTTTNGTKIEEDEVPDITDPFFLIETFLIM-------------PSLYCLLTSLL-LYSVV 239
+ + E+ FF ++T ++ PS L S++ L VV
Sbjct: 211 RGSARRSSREQPCGERFPQAFFCMDTACVLIFTGEYLLRLFAAPSRCRFLRSVMSLIDVV 270
Query: 240 MI---YVHVLIP----------------------------------------------IL 250
I Y+ +L+P +L
Sbjct: 271 AILPYYIGLLVPKNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLL 330
Query: 251 MYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDM 298
+ +++F++ +++AE G++++ F SIP AFW+ +VTMTT+GYGDM
Sbjct: 331 FSLTMAIIIFATVMFYAEKGTNKTNFTSIPAAFWYTIVTMTTLGYGDM 378
>sp|Q03719|KCND1_MOUSE Potassium voltage-gated channel subfamily D member 1 OS=Mus
musculus GN=Kcnd1 PE=1 SV=1
Length = 651
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 173/384 (45%), Gaps = 69/384 (17%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
E +V+NVSG RFET TL+++P+TLLG + ++D EYFFDR+ F +L +Y
Sbjct: 40 EVLVVNVSGRRFETWKNTLDRYPDTLLGSSEKEF-FYDAESGEYFFDRDPDMFRHVLNFY 98
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYEL-----GDVATNKFR-----------EDEGFIKEE 135
++G RL P + F EE+ FY L GD ++R EDE +
Sbjct: 99 RTG-RLHCPRQECIQAFDEELAFYGLVPELVGDCCLEEYRDRKKENAERLAEDEEAEQAG 157
Query: 136 EKP-LPS-HEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVF 193
E P LP+ ++++W FE P +S AA V ++ F I +S++ +ET+P
Sbjct: 158 EGPALPAGSSLRQRLWRAFENPHTSTAALVFYYVTGFFIAVSVIANVVETIP-------- 209
Query: 194 NTTTNGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYI 253
GT + D F + +C+ T+ +L I
Sbjct: 210 ---CRGTPRWPSKEQSCGDRF--------PTAFFCMDTACVL-----------------I 241
Query: 254 FAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGY----GDMRCGAFFERGVF 309
F G L FA A S F +S+ + +G D GAF VF
Sbjct: 242 FTGEYLLR---LFA-APSRCRFLRSVMSLIDVVAILPYYIGLFVPKNDDVSGAFVTLRVF 297
Query: 310 CRSRLRKFLLQEYSRCFL--VGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENS 367
R+ KF L KS + + ++T +++F++ +++AE G+ +
Sbjct: 298 RVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLT---MAIIIFATVMFYAEKGTSKT 354
Query: 368 FFKSIPDAFWWAVVTMTTVGYGDM 391
F SIP AFW+ +VTMTT+GYGDM
Sbjct: 355 NFTSIPAAFWYTIVTMTTLGYGDM 378
>sp|Q95L11|KCNB2_RABIT Potassium voltage-gated channel subfamily B member 2 OS=Oryctolagus
cuniculus GN=KCNB2 PE=2 SV=1
Length = 911
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 150/357 (42%), Gaps = 96/357 (26%)
Query: 33 RVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPL----------RNEYFFDRNRP 82
RV INV GL E RTL++ P T LG R + L NEYFFDR+
Sbjct: 36 RVKINVGGLNHEVLWRTLDRLPRTRLGK-LRDCNTHESLLEVCDDYNLGDNEYFFDRHPG 94
Query: 83 SFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDV---------------------- 120
+F +IL +Y++G +L + F +E+ ++ + ++
Sbjct: 95 AFTSILNFYRTG-KLHMMEEMCALSFGQELDYWGIDEIYLESCCQARYHQKKEQMNEELR 153
Query: 121 -ATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIF 179
RE EG EE E ++K+W L E P SS AA+++AI+S+ I+LS +
Sbjct: 154 REAETMREREG---EEFDNTCCPEKRKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIAL 210
Query: 180 CLETLPEFKHYKVFNTTTNGTKIEEDEVPDIT---------------------DPFFLIE 218
L TLPE + F ++ K+ E I P +I+
Sbjct: 211 SLNTLPELQETDEFGQPSDNPKLAHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVID 270
Query: 219 TFLIMPSLYCLL-----TSLLLYSVVMIYVHV---------------------------- 245
I+P + S+L + V V +
Sbjct: 271 LLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRR 330
Query: 246 ----LIPILMYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDM 298
L +++++ G+++FSS V+FAE D + F SIP +FWWA +TMTTVGYGD+
Sbjct: 331 SYNELGLLILFLAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDI 387
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 346 VGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
+ G+++FSS V+FAE + + F SIP +FWWA +TMTTVGYGD+
Sbjct: 342 LAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDI 387
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 331 SIPDAFWWAVVTMTTVGYGVV 351
SIP +FWWA +TMTTVGYG +
Sbjct: 367 SIPASFWWATITMTTVGYGDI 387
>sp|Q52PG9|KCND1_BOVIN Potassium voltage-gated channel subfamily D member 1 OS=Bos taurus
GN=KCND1 PE=2 SV=1
Length = 648
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 176/384 (45%), Gaps = 69/384 (17%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
E +V+NVSG RFET TL+++P+TLLG + +++ EYFFDR+ F +L +Y
Sbjct: 40 EVLVVNVSGRRFETWKNTLDRYPDTLLGSSEKEF-FYNADSGEYFFDRDPDMFRHVLNFY 98
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYEL-----GDVATNKFR-----------EDEGFIKEE 135
++G RL P + F EE+ FY L GD ++R EDE +
Sbjct: 99 RTG-RLHCPRQECIQAFDEELAFYGLVPELVGDCCLEEYRDRKKENAERLAEDEEAEQAG 157
Query: 136 EKP-LPS-HEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVF 193
+ P LP+ ++++W FE P +S AA V ++ F I +S++ +ET+P
Sbjct: 158 DGPTLPAGSSLRQRLWRAFENPHTSTAALVFYYVTGFFIAVSVIANVVETIP-------- 209
Query: 194 NTTTNGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYI 253
+ T+ E P D F L + +C+ T+ +L I
Sbjct: 210 --CRSPTRRPPREQP-CGDRFPL--------AFFCMDTACVL-----------------I 241
Query: 254 FAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGY----GDMRCGAFFERGVF 309
F G L FA A S F +S+ + +G + GAF VF
Sbjct: 242 FTGEYLLR---LFA-APSRCRFLRSVMSLIDVVAILPYYIGLFMPKNEDVSGAFVTLRVF 297
Query: 310 CRSRLRKFLLQEYSRCFL--VGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENS 367
R+ KF L KS + + ++T +++F++ +++AE G+ +
Sbjct: 298 RVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLT---MAIIIFATVMFYAEKGTNKT 354
Query: 368 FFKSIPDAFWWAVVTMTTVGYGDM 391
F SIP AFW+ +VTMTT+GYGDM
Sbjct: 355 NFTSIPAAFWYTIVTMTTLGYGDM 378
>sp|A6H8H5|KCNB2_MOUSE Potassium voltage-gated channel subfamily B member 2 OS=Mus
musculus GN=Kcnb2 PE=2 SV=2
Length = 907
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 153/354 (43%), Gaps = 90/354 (25%)
Query: 33 RVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPL----------RNEYFFDRNRP 82
RV INV GL E RTL++ P T LG R + L NEYFFDR+
Sbjct: 36 RVKINVGGLNHEVLWRTLDRLPRTRLGK-LRDCNTHESLLEVCDDYNLNENEYFFDRHPG 94
Query: 83 SFDAILYYYQSGGRLRRPVNVPLDVFSEEI----------------KFYELGDVATNKFR 126
+F +IL +Y++G +L + F +E+ ++++ + + R
Sbjct: 95 AFTSILNFYRTG-KLHMMEEMCALSFGQELDYWGIDEIYLESCCQARYHQKKEQMNEELR 153
Query: 127 EDEGFIKEEE----KPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLE 182
+ ++E E E ++K+W L E P SS AA+++AI+S+ I+LS + L
Sbjct: 154 REAETMREREGEEFDNTCCPEKRKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIALSLN 213
Query: 183 TLPEFKHYKVFNTTTNGTKIEEDEVPDIT---------------------DPFFLIETFL 221
TLPE + F ++ K+ E I P +I+
Sbjct: 214 TLPELQENDEFGQPSDNRKLAHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLA 273
Query: 222 IMP---------SLYCLLTSLLLYSVVMIY-VHVLIPIL--------------------- 250
I+P S +L + VV I+ + ++ IL
Sbjct: 274 ILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYN 333
Query: 251 ------MYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDM 298
+++ G+++FSS V+FAE D + F SIP +FWWA +TMTTVGYGD+
Sbjct: 334 ELGLLILFLAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDI 387
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 346 VGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
+ G+++FSS V+FAE + + F SIP +FWWA +TMTTVGYGD+
Sbjct: 342 LAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDI 387
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 331 SIPDAFWWAVVTMTTVGYGVV 351
SIP +FWWA +TMTTVGYG +
Sbjct: 367 SIPASFWWATITMTTVGYGDI 387
>sp|Q63099|KCNB2_RAT Potassium voltage-gated channel subfamily B member 2 OS=Rattus
norvegicus GN=Kcnb2 PE=2 SV=2
Length = 907
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 155/354 (43%), Gaps = 90/354 (25%)
Query: 33 RVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPL----------RNEYFFDRNRP 82
RV INV GL E RTL++ P T LG R + L NEYFFDR+
Sbjct: 36 RVKINVGGLNHEVLWRTLDRLPRTRLGK-LRDCNTHESLLEVCDDYNLNENEYFFDRHPG 94
Query: 83 SFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDV----------ATNKFREDEGFI 132
+F +IL +Y++G +L + F +E+ ++ + ++ K + +E
Sbjct: 95 AFTSILNFYRTG-KLHMMEEMCALSFGQELDYWGIDEIYLESCCQARYHQKKEQMNEELR 153
Query: 133 KEEE--KPLPSHEF--------QRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLE 182
+E E + EF ++K+W L E P SS AA+++AI+S+ I+LS + L
Sbjct: 154 REAETMRDGEGEEFDNTCCPEKRKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIALSLN 213
Query: 183 TLPEFKHYKVFNTTTNGTKIEEDEVPDIT---------------------DPFFLIETFL 221
TLPE + F ++ K+ E I P +I+
Sbjct: 214 TLPELQENDEFGQPSDNRKLAHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLA 273
Query: 222 IMP---------SLYCLLTSLLLYSVVMIY-VHVLIPIL--------------------- 250
I+P S +L + VV I+ + ++ IL
Sbjct: 274 ILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYN 333
Query: 251 ------MYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDM 298
+++ G+++FSS V+FAE D + F SIP +FWWA +TMTTVGYGD+
Sbjct: 334 ELGLLILFLAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDI 387
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 346 VGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
+ G+++FSS V+FAE + + F SIP +FWWA +TMTTVGYGD+
Sbjct: 342 LAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDI 387
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 331 SIPDAFWWAVVTMTTVGYGVV 351
SIP +FWWA +TMTTVGYG +
Sbjct: 367 SIPASFWWATITMTTVGYGDI 387
>sp|Q9UK17|KCND3_HUMAN Potassium voltage-gated channel subfamily D member 3 OS=Homo
sapiens GN=KCND3 PE=1 SV=3
Length = 655
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 176/381 (46%), Gaps = 68/381 (17%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
E +V+NVSG RF+T TL ++P+TLLG + +F+ EYFFDR+ F +L +Y
Sbjct: 40 ELIVLNVSGRRFQTWRTTLERYPDTLLGSTEKEF-FFNEDTKEYFFDRDPEVFRCVLNFY 98
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYEL-----GDVATNKFRE----------DEGFIKEEE 136
++G +L P + + +E+ FY + GD ++++ D+ + +
Sbjct: 99 RTG-KLHYPRYECISAYDDELAFYGILPEIIGDCCYEEYKDRKRENAERLMDDNDSENNQ 157
Query: 137 KPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTT 196
+ +PS F++ +W FE P +S A V ++ F I +S++ +ET+P
Sbjct: 158 ESMPSLSFRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVP----------- 206
Query: 197 TNGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYIFAG 256
GT E+P E + + + +CL T+ VMI+ + L+ +FA
Sbjct: 207 -CGTVPGSKELP-------CGERYSV--AFFCLDTA-----CVMIFT---VEYLLRLFA- 247
Query: 257 VVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGY----GDMRCGAFFERGVFCRS 312
A S F +S+ + +G + GAF VF
Sbjct: 248 ------------APSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFRVF 295
Query: 313 RLRKFLLQEYSRCFL--VGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFK 370
R+ KF L KS + + ++T +++F++ +++AE GS S F
Sbjct: 296 RIFKFSRHSQGLRILGYTLKSCASELGFLLFSLT---MAIIIFATVMFYAEKGSSASKFT 352
Query: 371 SIPDAFWWAVVTMTTVGYGDM 391
SIP +FW+ +VTMTT+GYGDM
Sbjct: 353 SIPASFWYTIVTMTTLGYGDM 373
>sp|Q62897|KCND3_RAT Potassium voltage-gated channel subfamily D member 3 OS=Rattus
norvegicus GN=Kcnd3 PE=1 SV=2
Length = 655
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 176/381 (46%), Gaps = 68/381 (17%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
E +V+NVSG RF+T TL ++P+TLLG + +F+ EYFFDR+ F +L +Y
Sbjct: 40 ELIVLNVSGRRFQTWRTTLERYPDTLLGSTEKEF-FFNEDTKEYFFDRDPEVFRCVLNFY 98
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYEL-----GDVATNKFRE----------DEGFIKEEE 136
++G +L P + + +E+ FY + GD ++++ D+ + +
Sbjct: 99 RTG-KLHYPRYECISAYDDELAFYGILPEIIGDCCYEEYKDRKRENAERLMDDNESENNQ 157
Query: 137 KPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTT 196
+ +PS F++ +W FE P +S A V ++ F I +S++ +ET+P
Sbjct: 158 ESMPSLSFRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVP----------- 206
Query: 197 TNGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYIFAG 256
GT E+P E + + + +CL T+ VMI+ + L+ +FA
Sbjct: 207 -CGTVPGSKELP-------CGERYSV--AFFCLDTA-----CVMIFT---VEYLLRLFA- 247
Query: 257 VVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGY----GDMRCGAFFERGVFCRS 312
A S F +S+ + +G + GAF VF
Sbjct: 248 ------------APSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFRVF 295
Query: 313 RLRKFLLQEYSRCFL--VGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFK 370
R+ KF L KS + + ++T +++F++ +++AE GS S F
Sbjct: 296 RIFKFSRHSQGLRILGYTLKSCASELGFLLFSLT---MAIIIFATVMFYAEKGSSASKFT 352
Query: 371 SIPDAFWWAVVTMTTVGYGDM 391
SIP +FW+ +VTMTT+GYGDM
Sbjct: 353 SIPASFWYTIVTMTTLGYGDM 373
>sp|Q9TTT5|KCND3_RABIT Potassium voltage-gated channel subfamily D member 3 OS=Oryctolagus
cuniculus GN=KCND3 PE=2 SV=1
Length = 655
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 176/381 (46%), Gaps = 68/381 (17%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
E +V+NVSG RF+T TL ++P+TLLG + +F+ EYFFDR+ F +L +Y
Sbjct: 40 ELIVLNVSGRRFQTWRTTLERYPDTLLGSTEKEF-FFNEDTKEYFFDRDPEVFRCVLNFY 98
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYEL-----GDVATNKFRE----------DEGFIKEEE 136
++G +L P + + +E+ FY + GD ++++ D+ + +
Sbjct: 99 RTG-KLHYPRYECISAYDDELAFYGILPEIIGDCCYEEYKDRKRENAERLMDDNDSENNQ 157
Query: 137 KPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTT 196
+ +PS F++ +W FE P +S A V ++ F I +S++ +ET+P
Sbjct: 158 ESMPSLSFRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVP----------- 206
Query: 197 TNGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYIFAG 256
GT E+P E + + + +CL T+ VMI+ + L+ +FA
Sbjct: 207 -CGTVPGSKELP-------CGERYSV--AFFCLDTA-----CVMIFT---VEYLLRLFA- 247
Query: 257 VVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGY----GDMRCGAFFERGVFCRS 312
A S F +S+ + +G + GAF VF
Sbjct: 248 ------------APSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFRVF 295
Query: 313 RLRKFLLQEYSRCFL--VGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFK 370
R+ KF L KS + + ++T +++F++ +++AE GS S F
Sbjct: 296 RIFKFSRHSQGLRILGYTLKSCASELGFLLFSLT---MAIIIFATVMFYAEKGSSASKFT 352
Query: 371 SIPDAFWWAVVTMTTVGYGDM 391
SIP +FW+ +VTMTT+GYGDM
Sbjct: 353 SIPASFWYTIVTMTTLGYGDM 373
>sp|Q4ZHA6|KCNB2_BOVIN Potassium voltage-gated channel subfamily B member 2 OS=Bos taurus
GN=KCNB2 PE=2 SV=1
Length = 911
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 151/357 (42%), Gaps = 96/357 (26%)
Query: 33 RVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPL----------RNEYFFDRNRP 82
RV INV GL E RTL++ P T LG R + L NEYFFDR+
Sbjct: 36 RVKINVGGLNHEVLWRTLDRLPRTRLGK-LRDCNTHESLLEVCDDYNLNENEYFFDRHPG 94
Query: 83 SFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDV---------------------- 120
+F +IL +Y++G +L + F +E+ ++ + ++
Sbjct: 95 AFTSILNFYRTG-KLHMMEEMCALSFGQELDYWGIDEIYLESCCQARYHQKKEQMNEELR 153
Query: 121 -ATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIF 179
RE EG EE E ++K+W L E P SS AA+++AI+S+ I+LS +
Sbjct: 154 REAETMREREG---EEFDNTCCPEKRKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIAL 210
Query: 180 CLETLPEFKHYKVFNTTTNGTKIEEDEVPDIT---------------------DPFFLIE 218
L TLPE + F + ++ E I P +I+
Sbjct: 211 SLNTLPELQEMDEFGQPNDNPQLAHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVID 270
Query: 219 TFLIMP---------SLYCLLTSLLLYSVVMIY-VHVLIPIL------------------ 250
I+P S +L + VV I+ + ++ IL
Sbjct: 271 LLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRR 330
Query: 251 ---------MYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDM 298
+++ G+++FSS V+FAE D + F SIP +FWWA +TMTTVGYGD+
Sbjct: 331 SYNELGLLILFLAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDI 387
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 346 VGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
+ G+++FSS V+FAE + + F SIP +FWWA +TMTTVGYGD+
Sbjct: 342 LAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDI 387
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 331 SIPDAFWWAVVTMTTVGYGVV 351
SIP +FWWA +TMTTVGYG +
Sbjct: 367 SIPASFWWATITMTTVGYGDI 387
>sp|Q9Z0V1|KCND3_MOUSE Potassium voltage-gated channel subfamily D member 3 OS=Mus
musculus GN=Kcnd3 PE=1 SV=1
Length = 655
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 176/381 (46%), Gaps = 68/381 (17%)
Query: 32 ERVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPLRNEYFFDRNRPSFDAILYYY 91
E +V+NVSG RF+T TL ++P+TLLG + +F+ EYFFDR+ F +L +Y
Sbjct: 40 ELIVLNVSGRRFQTWRTTLERYPDTLLGSTEKEF-FFNEDTKEYFFDRDPEVFRCVLNFY 98
Query: 92 QSGGRLRRPVNVPLDVFSEEIKFYEL-----GDVATNKFRE----------DEGFIKEEE 136
++G +L P + + +E+ FY + GD ++++ D+ + +
Sbjct: 99 RTG-KLHYPRYECISAYDDELAFYGILPEIIGDCCYEEYKDRKRENAERLMDDNDSENNQ 157
Query: 137 KPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTT 196
+ +PS F++ +W FE P +S A V ++ F I +S++ +ET+P
Sbjct: 158 ESMPSLSFRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVP----------- 206
Query: 197 TNGTKIEEDEVPDITDPFFLIETFLIMPSLYCLLTSLLLYSVVMIYVHVLIPILMYIFAG 256
GT E+P E + + + +CL T+ VMI+ + L+ +FA
Sbjct: 207 -CGTVPGSKELP-------CGERYSV--AFFCLDTA-----CVMIFT---VEYLLRLFA- 247
Query: 257 VVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGY----GDMRCGAFFERGVFCRS 312
A S F +S+ + +G + GAF VF
Sbjct: 248 ------------APSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFRVF 295
Query: 313 RLRKFLLQEYSRCFL--VGKSIPDAFWWAVVTMTTVGYGVVLFSSAVYFAEAGSENSFFK 370
R+ KF L KS + + ++T +++F++ +++AE GS S F
Sbjct: 296 RIFKFSRHSQGLRILGYTLKSCASELGFLLFSLT---MAIIIFATVMFYAEKGSSASKFT 352
Query: 371 SIPDAFWWAVVTMTTVGYGDM 391
SIP +FW+ +VTMTT+GYGDM
Sbjct: 353 SIPASFWYTIVTMTTLGYGDM 373
>sp|Q92953|KCNB2_HUMAN Potassium voltage-gated channel subfamily B member 2 OS=Homo
sapiens GN=KCNB2 PE=2 SV=2
Length = 911
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 154/354 (43%), Gaps = 90/354 (25%)
Query: 33 RVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPL----------RNEYFFDRNRP 82
RV INV GL E RTL++ P T LG R + L NEYFFDR+
Sbjct: 36 RVKINVGGLNHEVLWRTLDRLPRTRLGK-LRDCNTHESLLEVCDDYNLNENEYFFDRHPG 94
Query: 83 SFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDV----------ATNKFREDEGFI 132
+F +IL +Y++G +L + F +E+ ++ + ++ K + +E
Sbjct: 95 AFTSILNFYRTG-KLHMMEEMCALSFGQELDYWGIDEIYLESCCQARYHQKKEQMNEELR 153
Query: 133 KEEE--KPLPSHEF--------QRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLE 182
+E E + EF ++K+W L E P SS AA+++AI+S+ I+LS + L
Sbjct: 154 REAETMREREGEEFDNTCCPDKRKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIALSLN 213
Query: 183 TLPEFKHYKVFNTTTNGTKIEEDEVPDIT---------------------DPFFLIETFL 221
TLPE + F + ++ E I P +I+
Sbjct: 214 TLPELQETDEFGQLNDNRQLAHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLA 273
Query: 222 IMP---------SLYCLLTSLLLYSVVMIY-VHVLIPIL--------------------- 250
I+P S +L + VV I+ + ++ IL
Sbjct: 274 ILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYN 333
Query: 251 ------MYIFAGVVLFSSTVYFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDM 298
+++ G+++FSS V+FAE D + F SIP +FWWA +TMTTVGYGD+
Sbjct: 334 ELGLLILFLAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDI 387
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 346 VGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
+ G+++FSS V+FAE + + F SIP +FWWA +TMTTVGYGD+
Sbjct: 342 LAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDI 387
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 331 SIPDAFWWAVVTMTTVGYGVV 351
SIP +FWWA +TMTTVGYG +
Sbjct: 367 SIPASFWWATITMTTVGYGDI 387
>sp|P15387|KCNB1_RAT Potassium voltage-gated channel subfamily B member 1 OS=Rattus
norvegicus GN=Kcnb1 PE=1 SV=3
Length = 857
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 148/357 (41%), Gaps = 96/357 (26%)
Query: 33 RVVINVSGLRFETQLRTLNQFPETLLGDPARRIRYFDPL----------RNEYFFDRNRP 82
RV +NV GL E RTL++ P T LG R D L NEYFFDR+
Sbjct: 32 RVRLNVGGLAHEVLWRTLDRLPRTRLGK-LRDCNTHDSLLQVCDDYSLEDNEYFFDRHPG 90
Query: 83 SFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDV---------------------- 120
+F +IL +Y++G RL + FS+E+ ++ + ++
Sbjct: 91 AFTSILNFYRTG-RLHMMEEMCALSFSQELDYWGIDEIYLESCCQARYHQKKEQMNEELK 149
Query: 121 -ATNKFREDEGFIKEEEKPLPSHEFQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIF 179
RE EG EE E ++K+W L E P SS AA+++AIIS+ I+LS +
Sbjct: 150 REAETLREREG---EEFDNTCCAEKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIAL 206
Query: 180 CLETLPEFKHYKVFNTTTNGTKIEEDEVPDIT---------------------DPFFLIE 218
L TLPE + F +T+ ++ E I P I+
Sbjct: 207 SLNTLPELQSLDEFGQSTDNPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAID 266
Query: 219 TFLIMPSLYCLL-----TSLLLYSVVMIYVHVL--------------------------- 246
I+P + S+L + V V +
Sbjct: 267 LLAILPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRR 326
Query: 247 ----IPILMYIFAGVVLFSSTV-YFAEAGSDQSFFKSIPDAFWWAVVTMTTVGYGDM 298
+ +L+ A ++ S++ +FAE D + FKSIP +FWWA +TMTTVGYGD+
Sbjct: 327 SYNELGLLILFLAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDI 383
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 37/46 (80%)
Query: 346 VGYGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDM 391
+ G+++FSS V+FAE +++ FKSIP +FWWA +TMTTVGYGD+
Sbjct: 338 LAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDI 383
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 330 KSIPDAFWWAVVTMTTVGYGVV 351
KSIP +FWWA +TMTTVGYG +
Sbjct: 362 KSIPASFWWATITMTTVGYGDI 383
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.142 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,433,847
Number of Sequences: 539616
Number of extensions: 6483394
Number of successful extensions: 19257
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 18353
Number of HSP's gapped (non-prelim): 669
length of query: 391
length of database: 191,569,459
effective HSP length: 119
effective length of query: 272
effective length of database: 127,355,155
effective search space: 34640602160
effective search space used: 34640602160
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)