BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11396
(829 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of
6- Deoxyerthronolide B Synthase
pdb|2QO3|B Chain B, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of
6- Deoxyerthronolide B Synthase
Length = 915
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 259/473 (54%), Gaps = 5/473 (1%)
Query: 112 INNDDIAIIGISGQFPKA-NNVKKFWNNLLIGRNCVSKIPSTR-WIIDDFYDSDKNAIGK 169
+ +D IAI+ ++ + P N ++ W L G +S P+ R W + + D + G
Sbjct: 3 LESDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGT 62
Query: 170 TICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLC 229
+ K G L+D FD FF +SP EA MDPQQRL L+ W +E+AG +P SL G+
Sbjct: 63 SYVDKGGFLDDAAGFDAEFFGVSPREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTAT 122
Query: 230 GVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLV 289
GVF+G A Y + + Y++ G + ++ R+SY + L+GP +++DTACSSSLV
Sbjct: 123 GVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLEGPSISVDTACSSSLV 182
Query: 290 AIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGE 349
A+ A +SL G S +A+ GG ++ TP + + S+ L+ DG +F A+GF E
Sbjct: 183 ALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSE 242
Query: 350 GVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNIN 409
GV + + +++G +NQDG +NG++AP+ +Q R+ + + +
Sbjct: 243 GVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLE 302
Query: 410 PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGM 469
P D+ +EAHGTGT LGDPIE AL +++ + LGSVKSNIGH+ AAGV G+
Sbjct: 303 PGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGL 362
Query: 470 IKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSG 529
+K++L+L++ LP T++ H+ + + + W + ++ R AA+++FG SG
Sbjct: 363 LKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPWR-RGERTRRAAVSAFGISG 421
Query: 530 TNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISK 582
TNAH+++ E + + P+ +V +SA++ + L A I + +
Sbjct: 422 TNAHVIVEEAPEREHRETTAHDGRPVPLV--VSARSTAALRAQAAQIAELLER 472
>pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of
Module 5 From Debs.
pdb|2HG4|B Chain B, Structure Of The Ketosynthase-acyltransferase Didomain Of
Module 5 From Debs.
pdb|2HG4|C Chain C, Structure Of The Ketosynthase-acyltransferase Didomain Of
Module 5 From Debs.
pdb|2HG4|D Chain D, Structure Of The Ketosynthase-acyltransferase Didomain Of
Module 5 From Debs.
pdb|2HG4|E Chain E, Structure Of The Ketosynthase-acyltransferase Didomain Of
Module 5 From Debs.
pdb|2HG4|F Chain F, Structure Of The Ketosynthase-acyltransferase Didomain Of
Module 5 From Debs
Length = 917
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 267/508 (52%), Gaps = 19/508 (3%)
Query: 114 NDDIAIIGISGQFP-KANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTIC 172
+ IAI+G + +FP ++ + FW + G + +++ P+ R ++ D +A
Sbjct: 38 GEPIAIVGXACRFPGDVDSPESFWEFVSGGGDAIAEAPADR-----GWEPDPDA------ 86
Query: 173 KKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVF 232
+ G L FD FF ISP EA DPQQR+ L+ W +E AG++P SL GS GVF
Sbjct: 87 RLGGXLAAAGDFDAGFFGISPREALAXDPQQRIXLEISWEALERAGHDPVSLRGSATGVF 146
Query: 233 VGCAVSDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAI 291
G DY + P Y G + S+ RV+Y L L+GP +DTACSS L A+
Sbjct: 147 TGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEGPAXTVDTACSSGLTAL 206
Query: 292 AHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV 351
A +SL +ALAGGV + ++P + G L+ DG C F + A+GF EG
Sbjct: 207 HLAXESLRRDECGLALAGGVTVXSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGA 266
Query: 352 GVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPN 411
GV + +++G VNQDG +NG+TAP+ +Q R+ + + +
Sbjct: 267 GVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAG 326
Query: 412 DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471
D+ +EAHGTGT+LGDPIE AL ++ + +GSVKSNIGH+ AAGV G+ K
Sbjct: 327 DVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVXK 386
Query: 472 IILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTN 531
+L+L+H P T++++ + I+ + + ++ +SW + +R A ++SFG SGTN
Sbjct: 387 AVLALRHGEXPRTLHFDEPSPQIEWDLGAVSVVSQARSWPAGERPRR-AGVSSFGISGTN 445
Query: 532 AHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVK 591
AH+++ E + +E + P+ +V LS ++ A + ++++++ +NS
Sbjct: 446 AHVIVEEAPEADEPEPAPDSG-PVPLV--LSGRDEQAXRAQAGRLADHLAREPRNSLRDT 502
Query: 592 GITDAFSYINSSVQYKVIIITGYENYFA 619
G T + S+ +++ +++ + A
Sbjct: 503 GFT--LATRRSAWEHRAVVVGDRDEALA 528
>pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain
As A Framework For Inhibitor Design.
pdb|3HHD|B Chain B, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain
As A Framework For Inhibitor Design.
pdb|3HHD|C Chain C, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain
As A Framework For Inhibitor Design.
pdb|3HHD|D Chain D, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain
As A Framework For Inhibitor Design
Length = 965
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 234/427 (54%), Gaps = 25/427 (5%)
Query: 113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTIC 172
+++ I G+SG+ P++ N+++FW+NL+ G + V+ DD D A +
Sbjct: 2 TGEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVT---------DD--DRRWKAGLYGLP 50
Query: 173 KKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVF 232
++ G L+D+ FD FF + P +A MDPQ RL L+ + I D G NP SL G+ GV+
Sbjct: 51 RRSGKLKDLSRFDASFFGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVW 110
Query: 233 VGCAVSDYNKLIT-DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAI 291
VG + S+ ++ ++ DP+ Y+++G +++ R+S+F + +GP +A+DTACSSSL+A+
Sbjct: 111 VGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGPSIALDTACSSSLMAL 170
Query: 292 AHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV 351
+A ++ G A+ GG+ ++ P+ ++ + GMLSP+G C +FD NG+ EGV
Sbjct: 171 QNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGV 230
Query: 352 GVXXXXXXXXXXXXXXXIYCIIKGWGVNQDG-KTNGITAPNTKSQIRLQTKIYKKFNINP 410
+Y I G N DG K G+T P+ Q +L +Y+ + P
Sbjct: 231 ----VAVLLTKKSLARRVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAP 286
Query: 411 NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470
+ +EAHGTGTK+GDP E + + + + +GS KSN+GH A+G+ +
Sbjct: 287 ESFEYIEAHGTGTKVGDPQELNGITRAL--CATRQEPLLIGSTKSNMGHPEPASGLAALA 344
Query: 471 KIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIK-NKKKRMAAINSFGFSG 529
K++LSL+H + P ++++ N I P ++ + + D + INSFGF G
Sbjct: 345 KVLLSLEHGLWAPNLHFHSPNPEI-----PALLDGRLQVVDQPLPVRGGNVGINSFGFGG 399
Query: 530 TNAHIVL 536
+N HI+L
Sbjct: 400 SNVHIIL 406
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 246 bits (628), Expect = 4e-65, Method: Composition-based stats.
Identities = 146/432 (33%), Positives = 229/432 (53%), Gaps = 39/432 (9%)
Query: 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKK 174
+++ I G+SG+ P++ N+++FW NL+ G + V+ RW A + ++
Sbjct: 2 EEVVIAGMSGKLPESENLEEFWANLIGGVDMVTA-DDRRW----------KAGLYGLPRR 50
Query: 175 MGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVG 234
MG L+D+ FD FF + +A MDPQ R+ L+ + I D G NP SL G+ GV+VG
Sbjct: 51 MGKLKDLSRFDASFFGVHSKQANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVG 110
Query: 235 CAVSDYNKLIT-DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAH 293
+ SD ++ ++ DP+ Y+++G +++ R+S+F + +GP + IDTACSSSL+A+
Sbjct: 111 VSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGPSITIDTACSSSLLALQS 170
Query: 294 ACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGV 353
A ++ G A+ GG+ ++ P+ ++ K GMLS DG C SFD G+ E V
Sbjct: 171 AYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEGTGYCRAEAV-- 228
Query: 354 XXXXXXXXXXXXXXXIYCIIKGWGVNQDG-KTNGITAPNTKSQIRLQTKIYKKFNINPND 412
+Y I G N DG K G+T P+ Q +L +Y +P
Sbjct: 229 --VAVLLTKKSLARRVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPES 286
Query: 413 IQLLEAHGTGTKLGDPIEF----EALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIG 468
++ +EAHGTGTK+GDP E ALC + + +GS KSN+GH A+GV
Sbjct: 287 LEYIEAHGTGTKVGDPQELNGIVNALCAT------RREPLLIGSTKSNMGHPEPASGVAA 340
Query: 469 MIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWD----IKNKKKRMAAINS 524
+IK++LSL+H V P ++Y+ N I P + + + D I+ INS
Sbjct: 341 LIKVLLSLEHGVWAPNLHYHTPNPEI-----PALQDGRLQVVDRPLPIRGGN---VGINS 392
Query: 525 FGFSGTNAHIVL 536
FGF G+N H++L
Sbjct: 393 FGFGGSNVHVIL 404
>pdb|2Q35|A Chain A, Crystal Structure Of The Y82f Variant Of Ech2
Decarboxylase Domain Of Curf From Lyngbya Majuscula
Length = 243
Score = 153 bits (386), Expect = 5e-37, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 130/224 (58%), Gaps = 3/224 (1%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
S++ + ++V+G+ FS + + QYKV+I+TGY NYF+ G +KE L++ +G D
Sbjct: 23 SRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEVEVLDL 82
Query: 641 KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL 700
+ L C+IP+IAAMQGH+ G G +GL+ D+ +FS+ESVY + +M+YGFTP ++L
Sbjct: 83 SG--LILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSL 140
Query: 701 IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYXXXXXXXXXXXXXXXX 760
I ++ G L++E+++T ++GKEL ERGI PV+ R+ VL Y
Sbjct: 141 ILREKLGSELAQEMIYTGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSL 200
Query: 761 XXXXXYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF 804
+ S ++ K EL +H TF N P + + I++ F
Sbjct: 201 VALKQHLSADIKAKFPEAIKKELEIHQVTF-NQPEIASRIQQEF 243
>pdb|2Q2X|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf
From Lyngbya Majuscula
pdb|2Q34|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf
From Lyngbya Majuscula, Rhombohedral Crystal Form
Length = 243
Score = 146 bits (369), Expect = 4e-35, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 127/224 (56%), Gaps = 3/224 (1%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
S++ + ++V+G+ FS + + QYKV+I+TGY NYF+ G +KE L++ +G D
Sbjct: 23 SRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEYLIRKTRGEVEVLDL 82
Query: 641 KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL 700
+ L C+IP+IAA QGH+ G G +GL+ D+ +FS+ESVY + + +YGFTP ++L
Sbjct: 83 SG--LILDCEIPIIAAXQGHSFGGGLLLGLYADFVVFSQESVYATNFXKYGFTPVGATSL 140
Query: 701 IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYXXXXXXXXXXXXXXXX 760
I ++ G L++E ++T ++GKEL ERGI PV+ R+ VL Y
Sbjct: 141 ILREKLGSELAQEXIYTGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSL 200
Query: 761 XXXXXYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF 804
+ S ++ K EL +H TF N P + + I++ F
Sbjct: 201 VALKQHLSADIKAKFPEAIKKELEIHQVTF-NQPEIASRIQQEF 243
>pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR
pdb|1TQY|C Chain C, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR
pdb|1TQY|E Chain E, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR
pdb|1TQY|G Chain G, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR
Length = 424
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 176/448 (39%), Gaps = 62/448 (13%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
+ I G+ + P N ++FW L GR +I F+D ++
Sbjct: 5 VVITGVGVRAPGGNGTRQFWELLTSGRTATRRI--------SFFDP------SPYRSQVA 50
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
+ D FDP+ P E + MD + + +G +P +L + GV +G A
Sbjct: 51 AEAD---FDPVAEGFGPRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSA 107
Query: 237 VSDYNKLITDPKMYNAYALMGES--------------------VSILPARVSYFLNLQGP 276
V+ L + Y L+ +S S++PA V++ + +GP
Sbjct: 108 VAAATSLERE------YLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGP 161
Query: 277 CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-----HIKMSKSGMLSP 331
+ T C+S L ++ +A ++ G++ + AG TP + I+ + + P
Sbjct: 162 VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDP 221
Query: 332 DGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDG-KTNGITAP 390
+ FD +GFV EG + I+ I G+ + G+ A
Sbjct: 222 EHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKAD 281
Query: 391 NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL 450
+ ++ + + + DI + AHG+GT+ D E A + + H +
Sbjct: 282 GREMAETIRVAL-DESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGE---HARRTPV 337
Query: 451 GSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSW 510
S+KS +GHS A G + + +L+L+H V+PPT N + L+ P
Sbjct: 338 SSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPL--------- 388
Query: 511 DIKNKKKRMAAINSFGFSGTNAHIVLME 538
+ + +K R GF G + +VL +
Sbjct: 389 EARERKLRSVLTVGSGFGGFQSAMVLRD 416
>pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase
pdb|2IWY|B Chain B, Human Mitochondrial Beta-ketoacyl Acp Synthase
pdb|2IWZ|A Chain A, Human Mitochondrial Beta-Ketoacyl Acp Synthase Complexed
With Hexanoic Acid
pdb|2IWZ|B Chain B, Human Mitochondrial Beta-Ketoacyl Acp Synthase Complexed
With Hexanoic Acid
Length = 438
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 128/283 (45%), Gaps = 17/283 (6%)
Query: 260 VSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI 319
V++ +VS L+GP A+ TAC++ A+ + + G++ + +AGG +P
Sbjct: 164 VNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLS 223
Query: 320 HIKMSKSGMLS----PDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKG 375
S++ LS P C F + +GFV GEG V IY + G
Sbjct: 224 LAGFSRARALSTNSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLG 283
Query: 376 WGVNQDGKTNGITAPNTKSQ--IRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEA 433
+G++ D ITAP+ + + +R K + P +I + AH T T LGD E +A
Sbjct: 284 YGLSGD--AGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKA 341
Query: 434 LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH 493
+ F +Y A+ S K GH AAG + L+ ++ LPPT+N +
Sbjct: 342 IKHLFKDHAY---ALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPE 398
Query: 494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
L P K + W K +K+ + NSFGF GTNA + +
Sbjct: 399 FDLNYVPL----KAQEW--KTEKRFIGLTNSFGFGGTNATLCI 435
>pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf)
From Staphylococcus Aureus
pdb|2GQD|B Chain B, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf)
From Staphylococcus Aureus
Length = 437
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 173/439 (39%), Gaps = 47/439 (10%)
Query: 113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTIC 172
N + I G+ P N+VK W N L G N + KI TR + +
Sbjct: 26 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKI--TRIDTEPYS-----------V 72
Query: 173 KKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVF 232
G L++ I D +I EA MD + + ++DA + + GV+
Sbjct: 73 HLAGELKNFNIED----HIDKKEARRMDRFTQYAIVAAREAVKDAQLDINENTADRIGVW 128
Query: 233 VGCAVSDY------NKLITD--PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTAC 284
+G + +K + D P+ + + + + +VS L +GP A TAC
Sbjct: 129 IGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTAC 188
Query: 285 SSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKM---SKSGMLSP----DGHCYS 337
++ +I A + G++ + GG P H+ + S S LS + C
Sbjct: 189 ATGTNSIGEAFKIVQRGDADAMITGGT---EAPITHMAIAGFSASRALSTNDDIETACRP 245
Query: 338 FDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIR 397
F + +GFV GEG G+ IY I G+G D AP + R
Sbjct: 246 FQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSR 305
Query: 398 LQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNI 457
I P D+Q L AHGT T +GD E +A+ +F + + H + S KS
Sbjct: 306 AMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKH---LKVSSTKSMT 362
Query: 458 GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKK 517
GH A G I I LS+K + PTI+ + L+ P + + DI
Sbjct: 363 GHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVP----NEAQDLDIT---- 414
Query: 518 RMAAINSFGFSGTNAHIVL 536
A NS GF G NA +V
Sbjct: 415 -YAMSNSLGFGGHNAVLVF 432
>pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase
Length = 444
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 127/283 (44%), Gaps = 17/283 (6%)
Query: 260 VSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI 319
V++ +VS L+GP A+ TA ++ A+ + + G++ + +AGG +P
Sbjct: 170 VNMAAGQVSIRYKLKGPNHAVSTAXTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLS 229
Query: 320 HIKMSKSGMLS----PDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKG 375
S++ LS P C F + +GFV GEG V IY + G
Sbjct: 230 LAGFSRARALSTNSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLG 289
Query: 376 WGVNQDGKTNGITAPNTKSQ--IRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEA 433
+G++ D ITAP+ + + +R K + P +I + AH T T LGD E +A
Sbjct: 290 YGLSGD--AGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKA 347
Query: 434 LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH 493
+ F +Y A+ S K GH AAG + L+ ++ LPPT+N +
Sbjct: 348 IKHLFKDHAY---ALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPE 404
Query: 494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
L P K + W K +K+ + NSFGF GTNA + +
Sbjct: 405 FDLNYVPL----KAQEW--KTEKRFIGLTNSFGFGGTNATLCI 441
>pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein)
Synthase Ii From Thermus Thermophilus Hb8
pdb|1J3N|B Chain B, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein)
Synthase Ii From Thermus Thermophilus Hb8
Length = 408
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 160/429 (37%), Gaps = 44/429 (10%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
+ + G+ P + F L G++ V P TR+ D +A+ I ++
Sbjct: 4 VVVTGLGALTPIGVGQEAFHKAQLAGKSGVR--PITRF--------DASALPVRIAAEV- 52
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
D+ DP + + E +D + L +EDAG P L G VG
Sbjct: 53 ---DV---DPGAY-LDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTG 105
Query: 237 VSDYNK--------LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSL 288
+ L P + + + ++ A ++ GP + TAC++
Sbjct: 106 IGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGA 165
Query: 289 VAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQRAN 343
A+ A + LG + + LAGG TP + LS P+ F +
Sbjct: 166 DALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRD 225
Query: 344 GFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIY 403
GFV GEG GV IY + G+G + D P K +
Sbjct: 226 GFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARAL 285
Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
K I P + + AHGT T +GD E A+ F H + S KS IGH A
Sbjct: 286 KDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGD---HAKRLMVSSTKSMIGHLLGA 342
Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
AG + I + +L H V+PPTIN + + L+ P + + K A N
Sbjct: 343 AGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP----------EPREAKVDYALSN 392
Query: 524 SFGFSGTNA 532
SF F G NA
Sbjct: 393 SFAFGGHNA 401
>pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Ii From Brucella Melitensis
pdb|3KZU|B Chain B, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Ii From Brucella Melitensis
pdb|3KZU|C Chain C, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Ii From Brucella Melitensis
Length = 428
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 183/440 (41%), Gaps = 48/440 (10%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
+ I G+ P A+ V++ W LL G + ++ T + +DD + C+
Sbjct: 12 VVITGLGLVSPLASGVEETWKRLLAGESGARRV--TEFEVDDLA-------CQIACRIPV 62
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNP---------FSLSGS 227
F+P ++ P E +DP + ++DAG++P L GS
Sbjct: 63 GDGTNGTFNP-DLHMDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGS 121
Query: 228 LCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSS 287
G G + Y P+ + + + G +++ VS L+GP ++ TAC++
Sbjct: 122 GIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATG 181
Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTPDIHIK---------MSKSGMLSPDGHCYSF 338
AI A + G++ + +AGG +P I +S P +
Sbjct: 182 THAIGDAARLIAFGDADVMVAGGT---ESPVSRISLAGFAACKALSTERNDDPTAASRPY 238
Query: 339 DQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQ--I 396
D+ +GFV GEG G+ IY + G+G++ G ITAP +
Sbjct: 239 DEDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMS--GDAFHITAPTESGEGAQ 296
Query: 397 RLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN 456
R K+ I P++I + AHGT T + D IE A+ + + ++ S KS+
Sbjct: 297 RCMVAALKRAGIVPDEIDYINAHGTST-MADTIELGAVERVVGEAAAK---ISMSSTKSS 352
Query: 457 IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKK 516
IGH AAG + L+++ + P T+N + +++ P + +K
Sbjct: 353 IGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVPH---------KPRERK 403
Query: 517 KRMAAINSFGFSGTNAHIVL 536
+A NSFGF GTNA +VL
Sbjct: 404 IDVALSNSFGFGGTNASLVL 423
>pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis
Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb)
pdb|2GP6|B Chain B, X-Ray Crystal Structure Of Mycobacterium Tuberculosis
Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb)
Length = 434
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 114/261 (43%), Gaps = 22/261 (8%)
Query: 282 TACSSSLVAIAHACDSLILGNSKIALAGGVY-------IINTPDIHIKMSKSGMLSPDGH 334
+AC+S AIA A ++LG + A+ GGV I + I MS + P G
Sbjct: 185 SACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNND-DPAGA 243
Query: 335 CYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKS 394
C FD+ +GFV GEG + I I G + DG PN +
Sbjct: 244 CRPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGER 303
Query: 395 QIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVK 454
T+ + + P DI + AH TGT++GD E A+ + N A+ + K
Sbjct: 304 AGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGG-----NRPAVYAPK 358
Query: 455 SNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKN 514
S +GHS A G + I +L+L+ +V+PPT+N L+ I L+ + + +
Sbjct: 359 SALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLD---------VVAGEPRP 409
Query: 515 KKKRMAAINSFGFSGTNAHIV 535
R A NSFGF G N I
Sbjct: 410 GNYRYAINNSFGFGGHNVAIA 430
>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas
pdb|1W0I|B Chain B, Arabidopsis Thaliana Mitochondrial Kas
pdb|2IX4|A Chain A, Arabidopsis Thaliana Mitochondrial Beta-Ketoacyl Acp
Synthase Hexanoic Acid Complex
pdb|2IX4|B Chain B, Arabidopsis Thaliana Mitochondrial Beta-Ketoacyl Acp
Synthase Hexanoic Acid Complex
Length = 431
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 119/285 (41%), Gaps = 19/285 (6%)
Query: 260 VSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI 319
V++ VS QGP A TAC++ +I A + G++ + +AGG
Sbjct: 155 VNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALS 214
Query: 320 HIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCII 373
S+S LS P FD +GFV GEG GV IY +
Sbjct: 215 VAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAEL 274
Query: 374 KGWGVNQDGKTNGITAP--NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEF 431
G+G++ G + IT P + K + T+ ++ + PN I + AH T T +GD +E
Sbjct: 275 CGYGMS--GDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEA 332
Query: 432 EALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILN 491
A+ F++ + A S K GH AAG + I IL++ H V P T+N
Sbjct: 333 RAIKTVFSEHATSGTL-AFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVK--- 388
Query: 492 EHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
P F K R A NSFGF GTNA ++
Sbjct: 389 -----NPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLF 428
>pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target,
Implications From The Crystal Structure Of A Complex
With The Inhibitor Cerulenin.
pdb|1KAS|A Chain A, Beta-Ketoacyl-Acp Synthase Ii From Escherichia Coli
Length = 412
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 180/435 (41%), Gaps = 45/435 (10%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
+ + G+ P N V+ W LL G++ +S I D +D+ A K
Sbjct: 5 VVVTGLGMLSPVGNTVESTWKALLAGQSGISLI--------DHFDTSAYATKFAGLVKDF 56
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGY-----NPFSLSGSLCGV 231
+ EDI IS E MD + + ++D+G N + ++
Sbjct: 57 NCEDI---------ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSG 107
Query: 232 FVGCAVSDYNK---LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSL 288
G + + N + P+ + + + V+++ ++ L+GP ++I TAC+S +
Sbjct: 108 IGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGV 167
Query: 289 VAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQRAN 343
I HA + G++ + +AGG +TP + LS P +D+ +
Sbjct: 168 HNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERD 227
Query: 344 GFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAP--NTKSQIRLQTK 401
GFV G+G G+ IY + G+G++ D +T+P N
Sbjct: 228 GFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYH--MTSPPENGAGAALAMAN 285
Query: 402 IYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSA 461
+ I + I + AHGT T GD E +A+ F + + + S KS GH
Sbjct: 286 ALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTKSMTGHLL 342
Query: 462 TAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAA 521
AAG + I IL+L+ + +PPTIN + +E L+ P ++ + + +
Sbjct: 343 GAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPH------EARQVSGMEYTL-- 394
Query: 522 INSFGFSGTNAHIVL 536
NSFGF GTN ++
Sbjct: 395 CNSFGFGGTNGSLIF 409
>pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii)
Length = 427
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 182/440 (41%), Gaps = 45/440 (10%)
Query: 112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTI 171
++ + + G+ P N V+ W LL G++ +S I D +D+ A
Sbjct: 15 VSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLI--------DHFDTSAYATKFAG 66
Query: 172 CKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGY-----NPFSLSG 226
K + EDI IS E MD + + ++D+G N +
Sbjct: 67 LVKDFNCEDI---------ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGA 117
Query: 227 SLCGVFVGCAVSDYNK---LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTA 283
++ G + + N + P+ + + + V+++ ++ L+GP ++I TA
Sbjct: 118 AIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATA 177
Query: 284 CSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSF 338
C+S + I HA + G++ + +AGG +TP + LS P +
Sbjct: 178 CTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPW 237
Query: 339 DQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAP--NTKSQI 396
D+ +GFV G+G G+ IY + G+G++ D +T+P N
Sbjct: 238 DKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYH--MTSPPENGAGAA 295
Query: 397 RLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN 456
+ I + I + AHGT T GD E +A+ F + + + S KS
Sbjct: 296 LAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTKSM 352
Query: 457 IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKK 516
GH AAG + I IL+L+ + +PPTIN + +E L+ P ++ + +
Sbjct: 353 TGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPH------EARQVSGME 406
Query: 517 KRMAAINSFGFSGTNAHIVL 536
+ NSFGF GTN ++
Sbjct: 407 YTL--CNSFGFGGTNGSLIF 424
>pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Ii From Bartonella Henselae
pdb|3E60|B Chain B, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Ii From Bartonella Henselae
Length = 424
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 139/303 (45%), Gaps = 33/303 (10%)
Query: 247 PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIA 306
P+ + + + G +++ VS L+GP ++ TACS+ AI A + LG++ +
Sbjct: 137 PRRISPFFIPGRLINLASGYVSIKYGLRGPNHSVVTACSTGAHAIGDAARLIALGDADVM 196
Query: 307 LAGGVYIINTPDIHIKM---SKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXX 357
LAGG +P I + S LS P+ +D +GFV GEG +
Sbjct: 197 LAGGT---ESPINRISLAGFSACRALSTCRNDDPERASRPYDVDRDGFVMGEGAAIVVLE 253
Query: 358 XXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQ--IRLQTKIYKKFNINPNDIQL 415
IY I G+G++ D ITAP+ + R K+ +N +++
Sbjct: 254 ELEHAKKRGARIYAEIIGYGLSGDAYH--ITAPSESGEGAQRSMMAALKRAQVNVSELDY 311
Query: 416 LEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILS 475
+ AHGT T + D IE A+ Y+ ++ S KS+IGH AAG I +L+
Sbjct: 312 INAHGTST-MADVIELAAVERVLG---YYAPQVSMSSTKSSIGHLLGAAGAAEAIFCVLA 367
Query: 476 LKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAI--NSFGFSGTNAH 533
++ + P T+N LEN I TK K +++++ + NSFGF GTNA
Sbjct: 368 IRDNIAPATLN---------LENPS--IETKIDLVPHKPRERKIDTVLSNSFGFGGTNAS 416
Query: 534 IVL 536
+V+
Sbjct: 417 LVM 419
>pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently
Linked Dodecanoic Acid
Length = 427
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 181/440 (41%), Gaps = 45/440 (10%)
Query: 112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTI 171
++ + + G+ P N V+ W LL G++ +S I D +D+ A
Sbjct: 15 VSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLI--------DHFDTSAYATKFAG 66
Query: 172 CKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGY-----NPFSLSG 226
K + EDI IS E MD + + ++D+G N +
Sbjct: 67 LVKDFNCEDI---------ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGA 117
Query: 227 SLCGVFVGCAVSDYNK---LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTA 283
++ G + + N + P+ + + + V+++ ++ L+GP ++I TA
Sbjct: 118 AIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATA 177
Query: 284 CSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSF 338
C+S + I HA + G++ + +AGG +TP + LS P +
Sbjct: 178 CTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPW 237
Query: 339 DQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAP--NTKSQI 396
D+ +GFV G+G G+ IY + G+G++ D +T+P N
Sbjct: 238 DKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYH--MTSPPENGAGAA 295
Query: 397 RLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN 456
+ I + I + AHGT T GD E +A+ F + + + S S
Sbjct: 296 LAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTASM 352
Query: 457 IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKK 516
GH AAG + I IL+L+ + +PPTIN + +E L+ P ++ + +
Sbjct: 353 TGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPH------EARQVSGME 406
Query: 517 KRMAAINSFGFSGTNAHIVL 536
+ NSFGF GTN ++
Sbjct: 407 YTL--CNSFGFGGTNGSLIF 424
>pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein
Synthase Ii (Lmo2201) From Listeria Monocytogenes
Length = 413
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 168/432 (38%), Gaps = 41/432 (9%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
+ + GI P N+ + W N G N V+K TR DDF K
Sbjct: 6 VVVTGIGAVTPIGNDAETSWENAKKGVNGVAK--XTRLNPDDFP-----------VKIAA 52
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
L+D ++ L EA D + + ++D+G + + GV++G
Sbjct: 53 ELKDFDVEKYL----EKKEARKXDRFTHYAIASAEXAVQDSGLVIDDSNANRVGVWIGSG 108
Query: 237 VSDYNKLITDPKMYNAYALMGESVSILP--------ARVSYFLNLQGPCLAIDTACSSSL 288
+ T +++ S +P +VS +G TAC+++
Sbjct: 109 IGGXETFETQYEIFLNRGHRRVSPFFVPXXIPDXGSGQVSIRFGAKGINSTTVTACATAT 168
Query: 289 VAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS----PDGHCYSFDQRANG 344
+I A + G++ + GG T + + LS P+ C FD+ +G
Sbjct: 169 NSIGDAFKVIERGDADAXITGGAEAPITKXSLAGFTANKALSLNPDPETACRPFDKDRDG 228
Query: 345 FVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYK 404
F+ GEG G+ IY I G+G D APN + R
Sbjct: 229 FIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAXKXAID 288
Query: 405 KFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAA 464
+ P+ + + AHGT T D E +A+ F + H A+ S KS GH+ A+
Sbjct: 289 DAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGE---HAKKLAISSTKSXTGHTLGAS 345
Query: 465 GVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINS 524
G I I +L+++ ++ PTI+ +E L+ ++ + + ++ + NS
Sbjct: 346 GGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLD----YVPNEAREANVN-----VVISNS 396
Query: 525 FGFSGTNAHIVL 536
FGF G NA +V
Sbjct: 397 FGFGGHNATLVF 408
>pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With
Platensimycin
pdb|3HO2|A Chain A, Structure Of E.Coli Fabf(C163a) In Complex With Platencin
pdb|3HO9|A Chain A, Structure Of E.Coli Fabf(C163a) In Complex With Platencin
A1
pdb|3I8P|A Chain A, Crystal Structure Of E. Coli Fabf(C163a) In Complex With
Platensimycin A1
Length = 427
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 181/440 (41%), Gaps = 45/440 (10%)
Query: 112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTI 171
++ + + G+ P N V+ W LL G++ +S I D +D+ A
Sbjct: 15 VSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLI--------DHFDTSAYATKFAG 66
Query: 172 CKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGY-----NPFSLSG 226
K + EDI IS E MD + + ++D+G N +
Sbjct: 67 LVKDFNCEDI---------ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGA 117
Query: 227 SLCGVFVGCAVSDYNK---LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTA 283
++ G + + N + P+ + + + V+++ ++ L+GP ++I TA
Sbjct: 118 AIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATA 177
Query: 284 CSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSF 338
+S + I HA + G++ + +AGG +TP + LS P +
Sbjct: 178 ATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPW 237
Query: 339 DQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAP--NTKSQI 396
D+ +GFV G+G G+ IY + G+G++ D +T+P N
Sbjct: 238 DKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYH--MTSPPENGAGAA 295
Query: 397 RLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN 456
+ I + I + AHGT T GD E +A+ F + + + S KS
Sbjct: 296 LAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTKSM 352
Query: 457 IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKK 516
GH AAG + I IL+L+ + +PPTIN + +E L+ P ++ + +
Sbjct: 353 TGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPH------EARQVSGME 406
Query: 517 KRMAAINSFGFSGTNAHIVL 536
+ NSFGF GTN ++
Sbjct: 407 YTL--CNSFGFGGTNGSLIF 424
>pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii)
From Synechocystis Sp
Length = 416
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 167/433 (38%), Gaps = 42/433 (9%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
+ + G+ P N ++ +W L+ GRN + P TR +D+ A C+ G
Sbjct: 9 VVVTGLGAITPIGNTLQDYWQGLMEGRNGIG--PITR------FDASDQA-----CRFGG 55
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
++D FD F + EA+ MD + I DA L+ GV +G
Sbjct: 56 EVKD---FDATQF-LDRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTG 111
Query: 237 VS------DYNKLITD--PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSL 288
+ D ++ D P + + + ++ + L +GP TAC++
Sbjct: 112 IGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGS 171
Query: 289 VAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQRAN 343
AI A + G +K + GG TP + + + LS P FD+ +
Sbjct: 172 NAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRD 231
Query: 344 GFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIY 403
GFV GEG G+ IY + G+ + D P+ + R
Sbjct: 232 GFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWAL 291
Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
K + P + + AHGT T D E A+ ++ +Y+ A+ S KS GH
Sbjct: 292 KDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYN---IAVSSTKSMTGHLLGG 348
Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
+G I + ++++ +PPTIN + L+ P ++ D+ A N
Sbjct: 349 SGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPG--QSRALIVDV-------ALSN 399
Query: 524 SFGFSGTNAHIVL 536
SFGF G N +
Sbjct: 400 SFGFGGHNVTLAF 412
>pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant
pdb|2GFX|A Chain A, Structure Of E. Coli Fabf(C163q) In Complex With
Platensimycin
pdb|3G0Y|A Chain A, Structure Of E. Coli Fabf(C163q) In Complex With
Dihydroplatensimycin
pdb|3G11|A Chain A, Structure Of E. Coli Fabf(C163q) In Complex With
Dihydrophenyl Platensimycin
Length = 427
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 181/440 (41%), Gaps = 45/440 (10%)
Query: 112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTI 171
++ + + G+ P N V+ W LL G++ +S I D +D+ A
Sbjct: 15 VSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLI--------DHFDTSAYATKFAG 66
Query: 172 CKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGY-----NPFSLSG 226
K + EDI IS E MD + + ++D+G N +
Sbjct: 67 LVKDFNCEDI---------ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGA 117
Query: 227 SLCGVFVGCAVSDYNK---LITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTA 283
++ G + + N + P+ + + + V+++ ++ L+GP ++I TA
Sbjct: 118 AIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATA 177
Query: 284 CSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSF 338
+S + I HA + G++ + +AGG +TP + LS P +
Sbjct: 178 QTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPW 237
Query: 339 DQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAP--NTKSQI 396
D+ +GFV G+G G+ IY + G+G++ D +T+P N
Sbjct: 238 DKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYH--MTSPPENGAGAA 295
Query: 397 RLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN 456
+ I + I + AHGT T GD E +A+ F + + + S KS
Sbjct: 296 LAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASR---VLVSSTKSM 352
Query: 457 IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKK 516
GH AAG + I IL+L+ + +PPTIN + +E L+ P ++ + +
Sbjct: 353 TGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPH------EARQVSGME 406
Query: 517 KRMAAINSFGFSGTNAHIVL 536
+ NSFGF GTN ++
Sbjct: 407 YTL--CNSFGFGGTNGSLIF 424
>pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis
pdb|2WGE|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis
With Bound Tlm
Length = 416
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 161/423 (38%), Gaps = 64/423 (15%)
Query: 131 NVKKFWNNLLIGRNCVSKIPS---TRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPL 187
+++ W LL G + + + T+W + K G L+D D
Sbjct: 28 DIESTWKGLLAGESGIHALEDEFVTKWDL--------------AVKIGGHLKDP--VDSH 71
Query: 188 FFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDP 247
+ Y+ +L W +P + V VG + +++
Sbjct: 72 MGRLDMRRMSYVQRMGKLLGGQLWESAGSPEVDPDRFA-----VVVGTGLGGAERIVESY 126
Query: 248 KMYNAYALMGESVS------ILPARVSYFLNLQ-GPCLAIDT---ACSSSLVAIAHACDS 297
+ NA VS I+P + + LQ G + T ACSS AIAHA
Sbjct: 127 DLMNAGGP--RKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQ 184
Query: 298 LILGNSKIALAGGVY--IINTPDIHIKMSKSGML---SPDGHCYSFDQRANGFVPGEGVG 352
+++G++ +A+ GGV I P M ++ P+ FD+ +GFV GE
Sbjct: 185 IVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEAGA 244
Query: 353 VXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412
+ + G G+ D A + R T+ + ++P D
Sbjct: 245 LMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPAD 304
Query: 413 IQLLEAHGTGTKLGDPIEFEAL----CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIG 468
I + AHGT T +GD E A+ C+ A+ + KS +GHS A G +
Sbjct: 305 IDHVNAHGTATPIGDAAEANAIRVAGCDQ----------AAVYAPKSALGHSIGAVGALE 354
Query: 469 MIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFS 528
+ +L+L+ V+PPT+NY + I L+ + + + R A NSFGF
Sbjct: 355 SVLTVLTLRDGVIPPTLNYETPDPEIDLD---------VVAGEPRYGDYRYAVNNSFGFG 405
Query: 529 GTN 531
G N
Sbjct: 406 GHN 408
>pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I In Complex With Thiolactomycin, Implications
For Drug Design
pdb|1FJ4|B Chain B, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I In Complex With Thiolactomycin, Implications
For Drug Design
pdb|1FJ4|C Chain C, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I In Complex With Thiolactomycin, Implications
For Drug Design
pdb|1FJ4|D Chain D, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I In Complex With Thiolactomycin, Implications
For Drug Design
pdb|1FJ8|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I In Complex With Cerulenin, Implications For
Drug Design
pdb|1FJ8|B Chain B, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I In Complex With Cerulenin, Implications For
Drug Design
pdb|1FJ8|C Chain C, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I In Complex With Cerulenin, Implications For
Drug Design
pdb|1FJ8|D Chain D, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I In Complex With Cerulenin, Implications For
Drug Design
pdb|1G5X|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I
pdb|1G5X|B Chain B, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I
pdb|1G5X|C Chain C, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I
pdb|1G5X|D Chain D, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I
pdb|2BUH|A Chain A, E. Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I,
120 K
pdb|2BUH|B Chain B, E. Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I,
120 K
pdb|2BUH|C Chain C, E. Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I,
120 K
pdb|2BUH|D Chain D, E. Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I,
120 K
pdb|2BUI|A Chain A, E.Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I In
Complex With Octanoic Acid, 120k
pdb|2BUI|B Chain B, E.Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I In
Complex With Octanoic Acid, 120k
pdb|2BUI|C Chain C, E.Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I In
Complex With Octanoic Acid, 120k
pdb|2BUI|D Chain D, E.Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I In
Complex With Octanoic Acid, 120k
pdb|2AQ7|A Chain A, Structure-Activity Relationships At The 5-Posiiton Of
Thiolactomycin: An Intact 5(R)-Isoprene Unit Is Required
For Activity Against The Condensing Enzymes From
Mycobacterium Tuberculosis And Escherichia Coli
pdb|2AQ7|B Chain B, Structure-Activity Relationships At The 5-Posiiton Of
Thiolactomycin: An Intact 5(R)-Isoprene Unit Is Required
For Activity Against The Condensing Enzymes From
Mycobacterium Tuberculosis And Escherichia Coli
pdb|2AQ7|C Chain C, Structure-Activity Relationships At The 5-Posiiton Of
Thiolactomycin: An Intact 5(R)-Isoprene Unit Is Required
For Activity Against The Condensing Enzymes From
Mycobacterium Tuberculosis And Escherichia Coli
pdb|2AQ7|D Chain D, Structure-Activity Relationships At The 5-Posiiton Of
Thiolactomycin: An Intact 5(R)-Isoprene Unit Is Required
For Activity Against The Condensing Enzymes From
Mycobacterium Tuberculosis And Escherichia Coli
pdb|2AQB|A Chain A, Structure-Activity Relationships At The 5-Position Of
Thiolactomycin: An Intact 5(R)-Isoprene Unit Is Required
For Activity Against The Condensing Enzymes From
Mycobacterium Tuberculosis And Escherchia Coli
pdb|2AQB|B Chain B, Structure-Activity Relationships At The 5-Position Of
Thiolactomycin: An Intact 5(R)-Isoprene Unit Is Required
For Activity Against The Condensing Enzymes From
Mycobacterium Tuberculosis And Escherchia Coli
pdb|2AQB|C Chain C, Structure-Activity Relationships At The 5-Position Of
Thiolactomycin: An Intact 5(R)-Isoprene Unit Is Required
For Activity Against The Condensing Enzymes From
Mycobacterium Tuberculosis And Escherchia Coli
pdb|2AQB|D Chain D, Structure-Activity Relationships At The 5-Position Of
Thiolactomycin: An Intact 5(R)-Isoprene Unit Is Required
For Activity Against The Condensing Enzymes From
Mycobacterium Tuberculosis And Escherchia Coli
pdb|2VB7|A Chain A, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo
Structure After Soak In Peg Solution
pdb|2VB7|B Chain B, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo
Structure After Soak In Peg Solution
pdb|2VB7|D Chain D, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo
Structure After Soak In Peg Solution
pdb|2VB8|A Chain A, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli With Bound
Inhibitor Thiolactomycin
pdb|2VB8|B Chain B, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli With Bound
Inhibitor Thiolactomycin
pdb|2VB8|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli With Bound
Inhibitor Thiolactomycin
pdb|2VB8|D Chain D, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli With Bound
Inhibitor Thiolactomycin
pdb|2VB9|A Chain A, Beta-ketoacyl-acp Synthase I (kas) From E. Coli, Apo
Structure
pdb|2VB9|B Chain B, Beta-ketoacyl-acp Synthase I (kas) From E. Coli, Apo
Structure
pdb|2VB9|C Chain C, Beta-ketoacyl-acp Synthase I (kas) From E. Coli, Apo
Structure
pdb|2VB9|D Chain D, Beta-ketoacyl-acp Synthase I (kas) From E. Coli, Apo
Structure
pdb|2VBA|A Chain A, Beta-ketoacyl-acp Synthase I (kas) From E. Coli With Bound
Amino-thiazole Inhibitor
pdb|2VBA|B Chain B, Beta-ketoacyl-acp Synthase I (kas) From E. Coli With Bound
Amino-thiazole Inhibitor
pdb|2VBA|C Chain C, Beta-ketoacyl-acp Synthase I (kas) From E. Coli With Bound
Amino-thiazole Inhibitor
pdb|2VBA|D Chain D, Beta-ketoacyl-acp Synthase I (kas) From E. Coli With Bound
Amino-thiazole Inhibitor
Length = 406
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 27/301 (8%)
Query: 248 KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
K Y + S + A ++ + G +I +AC++S I +A + + LG I
Sbjct: 127 KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVF 186
Query: 308 AGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXX 361
AGG + ++ + G LS P+ ++D +GFV G G+
Sbjct: 187 AGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEH 245
Query: 362 XXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421
IY I G+G DG + AP+ + +R + I L +HGT
Sbjct: 246 ALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGT 300
Query: 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481
T +GD E A+ E F S A+ + K+ GHS AAGV I +L L+H +
Sbjct: 301 STPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFI 355
Query: 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541
P+IN L+E +N ++ D ++ NSFGF GTNA +V M K+K
Sbjct: 356 APSINIEELDEQAA------GLNIVTETTD---RELTTVMSNSFGFGGTNATLV-MRKLK 405
Query: 542 N 542
+
Sbjct: 406 D 406
>pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I From Escherichia Coli
pdb|1DD8|B Chain B, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I From Escherichia Coli
pdb|1DD8|C Chain C, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I From Escherichia Coli
pdb|1DD8|D Chain D, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein]
Synthase I From Escherichia Coli
pdb|2CDH|A Chain A, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|B Chain B, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|C Chain C, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|D Chain D, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|E Chain E, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|F Chain F, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 406
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 27/301 (8%)
Query: 248 KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
K Y + S + A ++ + G +I +AC++S I +A + + LG I
Sbjct: 127 KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVF 186
Query: 308 AGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXX 361
AGG + ++ + G LS P+ ++D +GFV G G+
Sbjct: 187 AGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEH 245
Query: 362 XXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421
IY I G+G DG + AP+ + +R + I L +HGT
Sbjct: 246 ALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGT 300
Query: 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481
T +GD E A+ E F S A+ + K+ GHS AAGV I +L L+H +
Sbjct: 301 STPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFI 355
Query: 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541
P+IN L+E +N ++ D ++ NSFGF GTNA +V M K+K
Sbjct: 356 APSINIEELDEQAA------GLNIVTETTD---RELTTVMSNSFGFGGTNATLV-MRKLK 405
Query: 542 N 542
+
Sbjct: 406 D 406
>pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I
K328r
pdb|1H4F|B Chain B, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I
K328r
pdb|1H4F|C Chain C, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I
K328r
pdb|1H4F|D Chain D, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I
K328r
Length = 406
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 129/301 (42%), Gaps = 27/301 (8%)
Query: 248 KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
K Y + S + A ++ + G +I +AC++S I +A + + LG I
Sbjct: 127 KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVF 186
Query: 308 AGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXX 361
AGG + ++ + G LS P+ ++D +GFV G G+
Sbjct: 187 AGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEH 245
Query: 362 XXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421
IY I G+G DG + AP+ + +R + I L +HGT
Sbjct: 246 ALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGT 300
Query: 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481
T +GD E A+ E F S A+ + ++ GHS AAGV I +L L+H +
Sbjct: 301 STPVGDVKELAAIREVFGDKS-----PAISATRAMTGHSLGAAGVQEAIYSLLMLEHGFI 355
Query: 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541
P+IN L+E +N ++ D ++ NSFGF GTNA +V M K+K
Sbjct: 356 APSINIEELDEQAA------GLNIVTETTD---RELTTVMSNSFGFGGTNATLV-MRKLK 405
Query: 542 N 542
+
Sbjct: 406 D 406
>pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From
Burkholderia Phymatum Stm815
pdb|4EWG|B Chain B, Crystal Structure Of A Beta-Ketoacyl Synthase From
Burkholderia Phymatum Stm815
Length = 412
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI--KMS 324
VS F +L+G + +AC+S AI +A +++ +G + LAGG ++ P + + +
Sbjct: 151 VSLFWDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFDTLY 210
Query: 325 KSGMLSPDGHC--YSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDG 382
+ + + H FD + +G V GEG I+ I G+G N DG
Sbjct: 211 ATSTRNDEPHLTPRPFDAKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDG 270
Query: 383 KTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFS 442
+T P + R + ++ N I + AHGT T GD E +A +F +
Sbjct: 271 AH--MTQPTASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFGE-- 326
Query: 443 YHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF 502
+ S+KS +GH+ A G + I +K PT+N L E
Sbjct: 327 ----RMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLN---LTE---------- 369
Query: 503 INTKCKSWD-IKNKKKRMAA----INSFGFSGTNAHIVL 536
++ C D I+ + + + A N+F F G N ++
Sbjct: 370 VDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIF 408
>pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier
Protein) Synthase I Lys328ala Mutant
pdb|2BYW|B Chain B, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier
Protein) Synthase I Lys328ala Mutant
pdb|2BYW|C Chain C, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier
Protein) Synthase I Lys328ala Mutant
pdb|2BYW|D Chain D, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier
Protein) Synthase I Lys328ala Mutant
pdb|2BYX|A Chain A, Kas I Lys328ala Mutant In Complex With Fatty Acid
pdb|2BYX|B Chain B, Kas I Lys328ala Mutant In Complex With Fatty Acid
pdb|2BYX|C Chain C, Kas I Lys328ala Mutant In Complex With Fatty Acid
pdb|2BYX|D Chain D, Kas I Lys328ala Mutant In Complex With Fatty Acid
Length = 418
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 27/301 (8%)
Query: 248 KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
K Y + S + A ++ + G +I +AC++S I +A + + LG I
Sbjct: 139 KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVF 198
Query: 308 AGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXX 361
AGG + ++ + G LS P+ ++D +GFV G G+
Sbjct: 199 AGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEH 257
Query: 362 XXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421
IY I G+G DG + AP+ + +R + I L +HGT
Sbjct: 258 ALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNSHGT 312
Query: 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481
T +GD E A+ E F S A+ + + GHS AAGV I +L L+H +
Sbjct: 313 STPVGDVKELAAIREVFGDKS-----PAISATAAMTGHSLGAAGVQEAIYSLLMLEHGFI 367
Query: 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541
P+IN L+E +N ++ D ++ NSFGF GTNA +V M K+K
Sbjct: 368 APSINIEELDEQAA------GLNIVTETTD---RELTTVMSNSFGFGGTNATLV-MRKLK 417
Query: 542 N 542
+
Sbjct: 418 D 418
>pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With
C12 Fatty Acid
pdb|2BYZ|B Chain B, Structure Of E. Coli Kas I H298q Mutant In Complex With
C12 Fatty Acid
pdb|2BYZ|C Chain C, Structure Of E. Coli Kas I H298q Mutant In Complex With
C12 Fatty Acid
pdb|2BYZ|D Chain D, Structure Of E. Coli Kas I H298q Mutant In Complex With
C12 Fatty Acid
pdb|2BZ4|A Chain A, Structure Of E. Coli Kas I H298q Mutant
pdb|2BZ4|B Chain B, Structure Of E. Coli Kas I H298q Mutant
pdb|2BZ4|C Chain C, Structure Of E. Coli Kas I H298q Mutant
pdb|2BZ4|D Chain D, Structure Of E. Coli Kas I H298q Mutant
Length = 418
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 27/301 (8%)
Query: 248 KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
K Y + S + A ++ + G +I +AC++S I +A + + LG I
Sbjct: 139 KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVF 198
Query: 308 AGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXX 361
AGG + ++ + G LS P+ ++D +GFV G G+
Sbjct: 199 AGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEH 257
Query: 362 XXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421
IY I G+G DG + AP+ + +R + I L + GT
Sbjct: 258 ALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNSQGT 312
Query: 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481
T +GD E A+ E F S A+ + K+ GHS AAGV I +L L+H +
Sbjct: 313 STPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFI 367
Query: 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541
P+IN L+E +N ++ D ++ NSFGF GTNA +V M K+K
Sbjct: 368 APSINIEELDEQAA------GLNIVTETTD---RELTTVMSNSFGFGGTNATLV-MRKLK 417
Query: 542 N 542
+
Sbjct: 418 D 418
>pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation
pdb|2BYY|B Chain B, E. Coli Kas I H298e Mutation
pdb|2BYY|C Chain C, E. Coli Kas I H298e Mutation
pdb|2BYY|D Chain D, E. Coli Kas I H298e Mutation
pdb|2BZ3|A Chain A, Structure Of E. Coli Kas I H298e Mutant In Complex With
C12 Fatty Acid
pdb|2BZ3|B Chain B, Structure Of E. Coli Kas I H298e Mutant In Complex With
C12 Fatty Acid
pdb|2BZ3|C Chain C, Structure Of E. Coli Kas I H298e Mutant In Complex With
C12 Fatty Acid
pdb|2BZ3|D Chain D, Structure Of E. Coli Kas I H298e Mutant In Complex With
C12 Fatty Acid
Length = 418
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 27/301 (8%)
Query: 248 KMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIAL 307
K Y + S + A ++ + G +I +AC++S I +A + + LG I
Sbjct: 139 KAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVF 198
Query: 308 AGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXX 361
AGG + ++ + G LS P+ ++D +GFV G G+
Sbjct: 199 AGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEH 257
Query: 362 XXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421
IY I G+G DG + AP+ + +R + I L + GT
Sbjct: 258 ALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMHGVD---TPIDYLNSEGT 312
Query: 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481
T +GD E A+ E F S A+ + K+ GHS AAGV I +L L+H +
Sbjct: 313 STPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFI 367
Query: 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541
P+IN L+E +N ++ D ++ NSFGF GTNA +V M K+K
Sbjct: 368 APSINIEELDEQAA------GLNIVTETTD---RELTTVMSNSFGFGGTNATLV-MRKLK 417
Query: 542 N 542
+
Sbjct: 418 D 418
>pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGF|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant
pdb|2WGG|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
pdb|2WGG|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa
Variant With Bound Tlm
Length = 416
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 160/423 (37%), Gaps = 64/423 (15%)
Query: 131 NVKKFWNNLLIGRNCVSKIPS---TRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPL 187
+++ W LL G + + + T+W + K G L+D D
Sbjct: 28 DIESTWKGLLAGESGIHALEDEFVTKWDL--------------AVKIGGHLKDP--VDSH 71
Query: 188 FFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDP 247
+ Y+ +L W +P + V VG + +++
Sbjct: 72 MGRLDMRRMSYVQRMGKLLGGQLWESAGSPEVDPDRFA-----VVVGTGLGGAERIVESY 126
Query: 248 KMYNAYALMGESVS------ILPARVSYFLNLQ-GPCLAIDT---ACSSSLVAIAHACDS 297
+ NA VS I+P + + LQ G + T A SS AIAHA
Sbjct: 127 DLMNAGGP--RKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSAQSSGSEAIAHAWRQ 184
Query: 298 LILGNSKIALAGGVY--IINTPDIHIKMSKSGML---SPDGHCYSFDQRANGFVPGEGVG 352
+++G++ +A+ GGV I P M ++ P+ FD+ +GFV GE
Sbjct: 185 IVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEAGA 244
Query: 353 VXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412
+ + G G+ D A + R T+ + ++P D
Sbjct: 245 LMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPAD 304
Query: 413 IQLLEAHGTGTKLGDPIEFEAL----CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIG 468
I + AHGT T +GD E A+ C+ A+ + KS +GHS A G +
Sbjct: 305 IDHVNAHGTATPIGDAAEANAIRVAGCDQ----------AAVYAPKSALGHSIGAVGALE 354
Query: 469 MIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFS 528
+ +L+L+ V+PPT+NY + I L+ + + + R A NSFGF
Sbjct: 355 SVLTVLTLRDGVIPPTLNYETPDPEIDLD---------VVAGEPRYGDYRYAVNNSFGFG 405
Query: 529 GTN 531
G N
Sbjct: 406 GHN 408
>pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of
3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From
Yersinia Pestis Co92
pdb|3OYT|B Chain B, 1.84 Angstrom Resolution Crystal Structure Of
3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From
Yersinia Pestis Co92
Length = 410
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 125/306 (40%), Gaps = 26/306 (8%)
Query: 236 AVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHAC 295
A SD + K Y + S + A ++ ++G +I +AC++S I HA
Sbjct: 119 AGSDAXRTPRGLKGVGPYXVTKAXASGVSACLATPFKIKGVNYSISSACATSAHCIGHAL 178
Query: 296 DSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGFVPGE 349
+ + LG I AGG + + + G LS P ++DQ +GFV
Sbjct: 179 ELIQLGKQDIVFAGGGEEL-CWEXACEFDAXGALSTKYNDTPAKASRTYDQDRDGFVIAG 237
Query: 350 GVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNIN 409
G G IY I G+G DG AP+ + +R +
Sbjct: 238 GGGXVVVEELEHALARGAHIYAEIVGYGATSDGADX--VAPSGEGAVRCXQXAXAGVD-- 293
Query: 410 PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGM 469
I HGT T +GD E A+ E F N A+ S K+ GHS AAGV
Sbjct: 294 -TPIDYXNVHGTSTPVGDVKELGAIREVFGN-----NTPAISSTKAXTGHSLGAAGVHEA 347
Query: 470 IKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSG 529
I +L ++H + P+IN + L+E + N I T+ ++ NSFGF G
Sbjct: 348 IFSLLXVEHGFIAPSINIDNLDEQAQGXN----IITETTQRELTTVXS-----NSFGFGG 398
Query: 530 TNAHIV 535
TNA +V
Sbjct: 399 TNATLV 404
>pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex
With Dodecanoic Acid To 1.85 Resolution
pdb|1EK4|B Chain B, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex
With Dodecanoic Acid To 1.85 Resolution
pdb|1EK4|C Chain C, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex
With Dodecanoic Acid To 1.85 Resolution
pdb|1EK4|D Chain D, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex
With Dodecanoic Acid To 1.85 Resolution
Length = 418
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 111/258 (43%), Gaps = 27/258 (10%)
Query: 291 IAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANG 344
I +A + + LG I AGG + ++ + G LS P+ ++D +G
Sbjct: 182 IGNAVEQIQLGKQDIVFAGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDG 240
Query: 345 FVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYK 404
FV G G+ IY I G+G DG + AP+ + +R
Sbjct: 241 FVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMH 298
Query: 405 KFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAA 464
+ I L +HGT T +GD E A+ E F S A+ + K+ GHS AA
Sbjct: 299 GVD---TPIDYLNSHGTSTPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAA 350
Query: 465 GVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINS 524
GV I +L L+H + P+IN L+E +N ++ D ++ NS
Sbjct: 351 GVQEAIYSLLMLEHGFIAPSINIEELDEQAA------GLNIVTETTD---RELTTVMSNS 401
Query: 525 FGFSGTNAHIVLMEKIKN 542
FGF GTNA +V M K+K+
Sbjct: 402 FGFGGTNATLV-MRKLKD 418
>pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex
With C10 Fatty Acid Substrate
pdb|1F91|B Chain B, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex
With C10 Fatty Acid Substrate
pdb|1F91|C Chain C, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex
With C10 Fatty Acid Substrate
pdb|1F91|D Chain D, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex
With C10 Fatty Acid Substrate
pdb|2CF2|A Chain A, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|J Chain J, Architecture Of Mammalian Fatty Acid Synthase
Length = 406
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 111/258 (43%), Gaps = 27/258 (10%)
Query: 291 IAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANG 344
I +A + + LG I AGG + ++ + G LS P+ ++D +G
Sbjct: 170 IGNAVEQIQLGKQDIVFAGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDG 228
Query: 345 FVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYK 404
FV G G+ IY I G+G DG + AP+ + +R
Sbjct: 229 FVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMH 286
Query: 405 KFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAA 464
+ I L +HGT T +GD E A+ E F S A+ + K+ GHS AA
Sbjct: 287 GVD---TPIDYLNSHGTSTPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAA 338
Query: 465 GVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINS 524
GV I +L L+H + P+IN L+E +N ++ D ++ NS
Sbjct: 339 GVQEAIYSLLMLEHGFIAPSINIEELDEQAA------GLNIVTETTD---RELTTVMSNS 389
Query: 525 FGFSGTNAHIVLMEKIKN 542
FGF GTNA +V M K+K+
Sbjct: 390 FGFGGTNATLV-MRKLKD 406
>pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo
Structure After Soak In Peg Solution
Length = 406
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 111/258 (43%), Gaps = 27/258 (10%)
Query: 291 IAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANG 344
I +A + + LG I AGG + ++ + G LS P+ ++D +G
Sbjct: 170 IGNAVEQIQLGKQDIVFAGGGEEL-CWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDG 228
Query: 345 FVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYK 404
FV G G+ IY I G+G DG + AP+ + +R
Sbjct: 229 FVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGAD--MVAPSGEGAVRCMKMAMH 286
Query: 405 KFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAA 464
+ I L +HGT T +GD E A+ E F S A+ + K+ GHS AA
Sbjct: 287 GVD---TPIDYLNSHGTSTPVGDVKELAAIREVFGDKS-----PAISATKAMTGHSLGAA 338
Query: 465 GVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINS 524
GV I +L L+H + P+IN L+E +N ++ D ++ NS
Sbjct: 339 GVQEAIYSLLMLEHGFIAPSINIEELDEQAA------GLNIVTETTD---RELTTVMSNS 389
Query: 525 FGFSGTNAHIVLMEKIKN 542
FGF GTNA +V M K+K+
Sbjct: 390 FGFGGTNATLV-MRKLKD 406
>pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella
Melitensis Bound To The Fragment 7-Hydroxycoumarin
Length = 411
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 134/343 (39%), Gaps = 41/343 (11%)
Query: 213 CIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITD--------PKMYNAYALMGESVSILP 264
I DAG +S G+ +G ++ PK +A+ S
Sbjct: 86 AIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTAS 145
Query: 265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTP-----DI 319
A ++ F ++G +I +AC++S I +A + + G AGG ++ D
Sbjct: 146 ATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDA 205
Query: 320 HIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVN 379
MS +P ++D+ +GFV G GV IY I G+G
Sbjct: 206 MGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGAT 265
Query: 380 QDGKTNGITAPNTKSQIR-----LQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL 434
DG + AP+ + IR L T K INP H T T GD E EA+
Sbjct: 266 SDGYD--MVAPSGEGAIRCMKMALSTVTSKIDYINP--------HATSTPAGDAPEIEAI 315
Query: 435 CESFNKFSYHKNFC-ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH 493
+ F + C + + KS GHS A GV I +L +++ N+ + H
Sbjct: 316 RQIFGA----GDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQN-------NFICESAH 364
Query: 494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
I+ E P F + I N + NSFGF GTNA +V
Sbjct: 365 IE-ELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVF 406
>pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella
Melitensis
pdb|3MQD|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella
Melitensis With Fol 0758, (1-Methyl-1h-Indazol-3-Yl)
Methanol
pdb|3U0E|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella
Melitensis In Complex With Fragment 9320
Length = 428
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 134/343 (39%), Gaps = 41/343 (11%)
Query: 213 CIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITD--------PKMYNAYALMGESVSILP 264
I DAG +S G+ +G ++ PK +A+ S
Sbjct: 103 AIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTAS 162
Query: 265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTP-----DI 319
A ++ F ++G +I +AC++S I +A + + G AGG ++ D
Sbjct: 163 ATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDA 222
Query: 320 HIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVN 379
MS +P ++D+ +GFV G GV IY I G+G
Sbjct: 223 MGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGAT 282
Query: 380 QDGKTNGITAPNTKSQIR-----LQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL 434
DG + AP+ + IR L T K INP H T T GD E EA+
Sbjct: 283 SDGYD--MVAPSGEGAIRCMKMALSTVTSKIDYINP--------HATSTPAGDAPEIEAI 332
Query: 435 CESFNKFSYHKNFC-ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH 493
+ F + C + + KS GHS A GV I +L +++ N+ + H
Sbjct: 333 RQIFGA----GDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQN-------NFICESAH 381
Query: 494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536
I+ E P F + I N + NSFGF GTNA +V
Sbjct: 382 IE-ELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVF 423
>pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier
Protein] Synthase Ii From Streptococcus Pneumoniae
pdb|1OXH|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier
Protein] Synthase Ii From Streptococcus Pneumoniae,
Triclinic Form
pdb|1OXH|B Chain B, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier
Protein] Synthase Ii From Streptococcus Pneumoniae,
Triclinic Form
pdb|1OXH|C Chain C, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier
Protein] Synthase Ii From Streptococcus Pneumoniae,
Triclinic Form
pdb|1OXH|D Chain D, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier
Protein] Synthase Ii From Streptococcus Pneumoniae,
Triclinic Form
Length = 430
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 151/429 (35%), Gaps = 46/429 (10%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
+ + G P N ++FWN+L G+ + I T++ DF
Sbjct: 25 VVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGI--TKFDHSDFD-----------VHNAA 71
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
++D FD F + D L + A + +L+ GV V
Sbjct: 72 EIQDFP-FDKYFVK---KDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASG 127
Query: 237 VSDYNKLITD---------PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSS 287
+ K I D PK L ++ V+ G C +I+TACSSS
Sbjct: 128 IGGI-KEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSS 186
Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTP----DIHIKMSKSGMLSPDGHCYSFDQRAN 343
AI A S+ G + L GG TP + S P FD+ N
Sbjct: 187 NDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRN 246
Query: 344 GFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIY 403
GFV GEG G+ I + G+G D P + I+
Sbjct: 247 GFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLAL 306
Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
++ I+P + + AHGT T + E A+ K + S KS GH A
Sbjct: 307 EEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK------EVPVSSTKSFTGHLLGA 360
Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
AG + I I +++H +P T + +++ +I K+ A N
Sbjct: 361 AGAVEAIVTIEAMRHNFVPMTAGTSEVSD---------YIEANVVYGQGLEKEIPYAISN 411
Query: 524 SFGFSGTNA 532
+FGF G NA
Sbjct: 412 TFGFGGHNA 420
>pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction
Mutant Of S. Pneumoniae Fabf
pdb|2RJT|D Chain D, Crystal Structure Analysis Of A Surface Entropy Reduction
Mutant Of S. Pneumoniae Fabf
pdb|2RJT|C Chain C, Crystal Structure Analysis Of A Surface Entropy Reduction
Mutant Of S. Pneumoniae Fabf
pdb|2RJT|B Chain B, Crystal Structure Analysis Of A Surface Entropy Reduction
Mutant Of S. Pneumoniae Fabf
Length = 428
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 154/429 (35%), Gaps = 46/429 (10%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
+ + G P N +FWN+L G+ + I T++ DF
Sbjct: 25 VVVTGYGVTSPIGNTPAEFWNSLATGKIGIGGI--TKFDHSDFD-----------VHNAA 71
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
++D FD F + D L + A + +L+ GV V
Sbjct: 72 EIQDFP-FDKYFVK---KDTNRFDNYSLYALYAAQEAVNHANLDVAALNRDRFGVIVASG 127
Query: 237 VSDYNKLITD---------PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSS 287
+ K I D PK L ++ V+ G C +I+TACSSS
Sbjct: 128 IGGI-KEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSS 186
Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTP----DIHIKMSKSGMLSPDGHCYSFDQRAN 343
AI A S+ G + L GG TP + S P FD+ N
Sbjct: 187 NDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRN 246
Query: 344 GFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIY 403
GFV GEG G+ I + G+G D P + I+
Sbjct: 247 GFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLAL 306
Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
++ I+P + + AHGT T + E A+ K + S KS GH A
Sbjct: 307 EEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK------AVPVSSTKSFTGHLLGA 360
Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
AG + I I +++H +P T + ++++I+ + + + +I A N
Sbjct: 361 AGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEAN----VVYGQGLAKEIP-----YAISN 411
Query: 524 SFGFSGTNA 532
+FGF G NA
Sbjct: 412 TFGFGGHNA 420
>pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR
pdb|1TQY|D Chain D, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR
pdb|1TQY|F Chain F, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR
pdb|1TQY|H Chain H, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR
Length = 415
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 151/395 (38%), Gaps = 50/395 (12%)
Query: 106 DDFDKSINNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKN 165
DD DKS+ I G+ P + +W+ +L GR+ + P TR+ + +
Sbjct: 5 DDDDKSV-----LITGVGVVAPNGLGLAPYWSAVLDGRHGLG--PVTRFDVSRY------ 51
Query: 166 AIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLS 225
G ++D D + + P DP RL L ++DA +P SL+
Sbjct: 52 -----PATLAGQIDDFHAPDHIPGRLLPQ----TDPSTRLALTAADWALQDAKADPESLT 102
Query: 226 GSLCGVFVGCAVS-------DYNKLITD-PKMYNAYALMGESVSILPARVSYFLNLQGPC 277
GV A ++ KL ++ PK + Y ++ ++S ++GP
Sbjct: 103 DYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPS 162
Query: 278 LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS----PDG 333
A+ + L A+ HA ++ G + + ++GGV P + SG +S PD
Sbjct: 163 SALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDR 221
Query: 334 HCYSFDQRANGFVPGEGVGV-XXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNT 392
FD+RA G+VPGEG + Y + G D AP +
Sbjct: 222 AYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFD------PAPGS 275
Query: 393 KSQIRLQTKIYKKFN---INPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCA 449
L+ I N P D+ ++ A G G D E A+ F +
Sbjct: 276 GRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGVPVTVP- 334
Query: 450 LGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPT 484
K+ G + G + ++ ++SL+ V+ PT
Sbjct: 335 ----KTTTGRLYSGGGPLDVVTALMSLREGVIAPT 365
>pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl
Carrier Protein] Synthase Ii From Streptococcus
Pneumoniae
Length = 431
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 150/429 (34%), Gaps = 46/429 (10%)
Query: 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMG 176
+ + G P N ++FWN+L G+ + I T++ DF
Sbjct: 26 VVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGI--TKFDHSDFD-----------VHNAA 72
Query: 177 SLEDIEIFDPLFFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCA 236
++D FD F + D L + A + +L+ GV V
Sbjct: 73 EIQDFP-FDKYFVK---KDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASG 128
Query: 237 VSDYNKLITD---------PKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSS 287
+ K I D PK L ++ V+ G C +I+TACSSS
Sbjct: 129 IGGI-KEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSS 187
Query: 288 LVAIAHACDSLILGNSKIALAGGVYIINTP----DIHIKMSKSGMLSPDGHCYSFDQRAN 343
AI A S+ G + L GG TP + S P FD+ N
Sbjct: 188 NDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRN 247
Query: 344 GFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIY 403
GFV GEG G+ I + G+G D P + I+
Sbjct: 248 GFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLAL 307
Query: 404 KKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATA 463
++ I+P + + A GT T + E A+ K + S KS GH A
Sbjct: 308 EEAEISPEQVAYVNAAGTSTPANEKGESGAIVAVLGK------EVPVSSTKSFTGHLLGA 361
Query: 464 AGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
AG + I I +++H +P T + +++ +I K+ A N
Sbjct: 362 AGAVEAIVTIEAMRHNFVPMTAGTSEVSD---------YIEANVVYAQGLEKEIPYAISN 412
Query: 524 SFGFSGTNA 532
+FGF G NA
Sbjct: 413 TFGFGGHNA 421
>pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Synthase Ii From Burkholderia Vietnamiensis
Length = 451
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 106/281 (37%), Gaps = 28/281 (9%)
Query: 266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSK 325
++S +GP TAC++S+ AI A + G + + LAGG K+S
Sbjct: 175 QISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFD-----KVSL 229
Query: 326 SGMLS-----------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIK 374
G + P FD+ +GFV GEG + I
Sbjct: 230 GGFAAARALSTGFSEEPVRASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEII 289
Query: 375 GWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL 434
G+G D + +R + ++ P + + AH T T +GD E EAL
Sbjct: 290 GYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEAL 349
Query: 435 CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHI 494
F + A+ S KS GH AAG I IL+L+ VLP T+N EH
Sbjct: 350 KTVFGVGAG----PAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNL----EH- 400
Query: 495 KLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIV 535
P ++ +A N FGF G NA ++
Sbjct: 401 ---PDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVL 438
>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 596 AFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTD-EKSYCMP--LYCKIP 652
A+ ++ +VI++TG F C G + R D S P + P
Sbjct: 42 AYQRLDDDPAVRVIVLTGAPPAF-CSGAQISAAAETFAAPRNPDFSASPVQPAAFELRTP 100
Query: 653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSR 712
VIAA+ GHAIG G + L D I +EE Y P +R+G P A + P+ G ++
Sbjct: 101 VIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAA 160
Query: 713 EILFTASEFKGKELKERGISMPVLPRKQVL 742
E+L T + F + E G++ LP +VL
Sbjct: 161 ELLLTGASFSAQRAVETGLANRCLPAGKVL 190
>pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Synthase Ii From Burkholderia Vietnamiensis In Complex
With Platencin
pdb|4F32|B Chain B, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Synthase Ii From Burkholderia Vietnamiensis In Complex
With Platencin
Length = 451
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 106/286 (37%), Gaps = 38/286 (13%)
Query: 266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSK 325
++S +GP TA ++S+ AI A + G + + LAGG K+S
Sbjct: 175 QISIKHRFRGPLGCPVTAXAASVQAIGDAMRMIRTGEADVVLAGGAEAAFD-----KVSL 229
Query: 326 SGMLS-----------PDGHCYSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIK 374
G + P FD+ +GFV GEG + I
Sbjct: 230 GGFAAARALSTGFSEEPVRASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEII 289
Query: 375 GWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL 434
G+G D + +R + ++ P + + AH T T +GD E EAL
Sbjct: 290 GYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEAL 349
Query: 435 CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHI 494
F + A+ S KS GH AAG I IL+L+ VLP T+N EH
Sbjct: 350 KTVFGVGAG----PAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNL----EH- 400
Query: 495 KLENSPFFINTKCKSWDIKNKKKR-----MAAINSFGFSGTNAHIV 535
+ D+ R +A N FGF G NA ++
Sbjct: 401 --------PDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVL 438
>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 278
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 83/210 (39%), Gaps = 3/210 (1%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE--KSY 643
NS V+ +T A + ++ IIITG FA G + + + + FT + ++
Sbjct: 50 NSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADA-FTADFFATW 108
Query: 644 CMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFP 703
+ P IAA+ G+A+G G + + CD I ++ + + P ++ G PG G +
Sbjct: 109 GKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLT 168
Query: 704 QRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYXXXXXXXXXXXXXXXXXXX 763
+ GK + +++ T E + G+ V+P +L
Sbjct: 169 RAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMA 228
Query: 764 XXYYSHSLQKKLSTIFLHELTMHDYTFVNN 793
+ + + LS L+E + F
Sbjct: 229 KEAVNRAFESSLSEGLLYERRLFHSAFATE 258
>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
Length = 258
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE--KSY 643
NS V+ +T A + ++ IIITG FA G + + + FT + ++
Sbjct: 30 NSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFA-DAFTADFFATW 88
Query: 644 CMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFP 703
+ P IAA+ G+A+G G + + CD I ++ + + P ++ G PG G +
Sbjct: 89 GKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLT 148
Query: 704 QRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
+ GK + +++ T E + G+ V+P +L
Sbjct: 149 RAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLL 187
>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3Q0G|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
Length = 257
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE--KSY 643
NS V+ +T A + ++ IIITG FA G + + + FT + ++
Sbjct: 29 NSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFA-DAFTADFFATW 87
Query: 644 CMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFP 703
+ P IAA+ G+A+G G + + CD I ++ + + P ++ G PG G +
Sbjct: 88 GKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLT 147
Query: 704 QRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
+ GK + +++ T E + G+ V+P +L
Sbjct: 148 RAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLL 186
>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycob Smegmatis
Length = 263
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCM 645
N T+ + DA ++ ++ I++TG E FA G ++ + +R + S
Sbjct: 35 NQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWD 94
Query: 646 PL-YCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQ 704
L + P++AA+ G+A+G G + + CD I ++ + + P + G PG G T +
Sbjct: 95 SLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTR 154
Query: 705 RFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
GK + ++ T +E + G+ ++P +L
Sbjct: 155 AVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAADLL 192
>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|E Chain E, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|F Chain F, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis
Length = 265
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 597 FSYINSSVQYKVIIITGY-ENYFACG-------GTKEGLLKIQKGISRFTDEKSYCMPLY 648
+ IN +V+I+TG E F G G E ++ R T E +P
Sbjct: 45 LTQINEEANTRVVILTGAGEKAFCAGADLKERAGXNEEQVRHAVSXIRTTXEXVEQLPQ- 103
Query: 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGK 708
PVIAA+ G A+G G + L CD+ I +E + PGAG T P+ G
Sbjct: 104 ---PVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGV 160
Query: 709 ILSREILFTASEFKGKELKERGISMPVLP 737
++E+++T +E KE G+ V+P
Sbjct: 161 GRAKELIYTGRRISAQEAKEYGLVEFVVP 189
>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|B Chain B, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 258
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
+++ N+ ++ + + + V +ITG +FA G + + + + D
Sbjct: 25 ARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAE-KDLAATLNDT 83
Query: 641 KSYCMPLYCKI-----PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPG 695
+ L+ ++ P+IAA+ G+A+GAG + L CD + E + + P + G PG
Sbjct: 84 RP---QLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPG 140
Query: 696 AGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFY 744
AG T + GK L+ +++ + ++ ++ G+ V P L Y
Sbjct: 141 AGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSDLTLEY 189
>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) From Geobacillus Kaustophilus Hta426
pdb|2QQ3|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|G Chain G, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|H Chain H, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|I Chain I, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|J Chain J, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|K Chain K, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|L Chain L, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
Length = 258
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 589 VVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQ----KGISRFTDEKSYC 644
+V I A + + + +VI++TG FA G + + K + +++F D
Sbjct: 33 MVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLNQFADWDRLS 92
Query: 645 MPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQ 704
+ K P+IAA+ G A+G G+ + L CD + S + + P + G PGAG T +
Sbjct: 93 I---VKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTK 149
Query: 705 RFGKILSREILFTASEFKGKELKERGI 731
G + E L+T + KE ++ GI
Sbjct: 150 LIGPKRALEWLWTGARMSAKEAEQLGI 176
>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|B Chain B, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|C Chain C, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|D Chain D, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|E Chain E, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|F Chain F, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
Length = 286
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 608 VIIITGYENYFACGGTKEGLLKIQKGISRFTD------EKSYCMPLYCKIPVIAAMQGHA 661
I++TG + FA G +K + +S F D K + K PVIAA+ G+A
Sbjct: 80 AIVLTGGDKAFAAGAD----IKEMQNLS-FQDCYSSKFLKHWDHLTQVKKPVIAAVNGYA 134
Query: 662 IGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEF 721
G G + + CD E++ + P + G PGAG T + GK L+ E++ T
Sbjct: 135 FGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 194
Query: 722 KGKELKERGISMPVLP 737
++ K+ G+ + P
Sbjct: 195 SAQDAKQAGLVSKICP 210
>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|B Chain B, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|C Chain C, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|D Chain D, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|E Chain E, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|F Chain F, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|2DUB|A Chain A, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|B Chain B, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|C Chain C, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|D Chain D, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|E Chain E, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|F Chain F, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
Length = 261
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 609 IIITGYENYFACGGTKEGLLK--IQKGIS-RFTDEKSYCMPLYCKIPVIAAMQGHAIGAG 665
I++TG E FA G + + Q S +F + + K PVIAA+ G+A+G G
Sbjct: 56 IVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRI--KKPVIAAVNGYALGGG 113
Query: 666 WAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE 725
+ + CD E++ + P + G PGAG T + GK L+ E++ T ++
Sbjct: 114 CELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQD 173
Query: 726 LKERGISMPVLP 737
K+ G+ + P
Sbjct: 174 AKQAGLVSKIFP 185
>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|B Chain B, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|C Chain C, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|D Chain D, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|E Chain E, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|F Chain F, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
Length = 260
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 609 IIITGYENYFACGGTKEGLLK--IQKGIS-RFTDEKSYCMPLYCKIPVIAAMQGHAIGAG 665
I++TG E FA G + + Q S +F + + K PVIAA+ G+A+G G
Sbjct: 55 IVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRI--KKPVIAAVNGYALGGG 112
Query: 666 WAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE 725
+ + CD E++ + P + G PGAG T + GK L+ E++ T ++
Sbjct: 113 CELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQD 172
Query: 726 LKERGISMPVLP 737
K+ G+ + P
Sbjct: 173 AKQAGLVSKIFP 184
>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|B Chain B, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|C Chain C, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|D Chain D, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|E Chain E, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|F Chain F, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
Length = 258
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 609 IIITGYENYFACGGTKEGLLK--IQKGIS-RFTDEKSYCMPLYCKIPVIAAMQGHAIGAG 665
I++TG E FA G + + Q S +F + + K PVIAA+ G+A+G G
Sbjct: 53 IVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRI--KKPVIAAVNGYALGGG 110
Query: 666 WAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE 725
+ + CD E++ + P + G PGAG T + GK L+ E++ T ++
Sbjct: 111 CELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQD 170
Query: 726 LKERGISMPVLP 737
K+ G+ + P
Sbjct: 171 AKQAGLVSKIFP 182
>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 608 VIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWA 667
V+IITG + F C G LK G S D S P K PVI A+ G A+ G
Sbjct: 55 VVIITGADPVF-CAGLD---LKELGGSSALPD-ISPRWPALTK-PVIGAINGAAVTGGLE 108
Query: 668 MGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK 727
+ L+CD I SE + + + R G P G ++ PQ+ G L+R + T +
Sbjct: 109 LALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADAL 168
Query: 728 ERGISMPVLPRKQVL 742
G+ V+P Q+L
Sbjct: 169 RAGLVTEVVPHDQLL 183
>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium
Avium
Length = 270
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 608 VIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWA 667
V+IITG + F C G LK G S D S P K PVI A+ G A+ G
Sbjct: 72 VVIITGADPVF-CAGLD---LKELGGSSALPD-ISPRWPALTK-PVIGAINGAAVTGGLE 125
Query: 668 MGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK 727
+ L+CD I SE + + + R G P G ++ PQ+ G L+R + T +
Sbjct: 126 LALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADAL 185
Query: 728 ERGISMPVLPRKQVL 742
G+ V+P Q+L
Sbjct: 186 RAGLVTEVVPHDQLL 200
>pdb|2GTR|A Chain A, Human Chromodomain Y-Like Protein
pdb|2GTR|B Chain B, Human Chromodomain Y-Like Protein
pdb|2GTR|C Chain C, Human Chromodomain Y-Like Protein
Length = 261
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEK---S 642
N V++ + A S ++ K+++++ + F CG L I R TD++ S
Sbjct: 31 NPEVMREVQSALS-TAAADDSKLVLLSAVGSVFCCG------LDFIYFIRRLTDDRKRES 83
Query: 643 YCMP----------LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
M + K P+I A+ G AIG G ++ CD +E++ +Q+PY +G
Sbjct: 84 TKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQ 143
Query: 693 TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGI 731
+P ST++FP+ G + E+L + + +E +G+
Sbjct: 144 SPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGL 182
>pdb|2FW2|A Chain A, Catalytic Domain Of Cdy
pdb|2FW2|B Chain B, Catalytic Domain Of Cdy
pdb|2FW2|C Chain C, Catalytic Domain Of Cdy
pdb|2FW2|D Chain D, Catalytic Domain Of Cdy
pdb|2FW2|E Chain E, Catalytic Domain Of Cdy
pdb|2FW2|F Chain F, Catalytic Domain Of Cdy
Length = 260
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKI 709
K P++ ++ G AIG G ++ CD +E++ +Q+PY +G +P S++ FP+ GK
Sbjct: 100 KKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKA 159
Query: 710 LSREILFTASEFKGKELKERGISMPVL 736
+ E+L + +E +G+ V
Sbjct: 160 SANEMLIAGRKLTAREACAKGLVSQVF 186
>pdb|2FBM|A Chain A, Acetyltransferase Domain Of Cdy1
pdb|2FBM|B Chain B, Acetyltransferase Domain Of Cdy1
pdb|2FBM|C Chain C, Acetyltransferase Domain Of Cdy1
Length = 291
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%)
Query: 650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKI 709
K P++ ++ G AIG G ++ CD +E++ +Q+PY +G +P S++ FP+ GK
Sbjct: 119 KKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKA 178
Query: 710 LSREILFTASEFKGKELKERGI 731
+ E+L + +E +G+
Sbjct: 179 SANEMLIAGRKLTAREACAKGL 200
>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 256
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 3/150 (2%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
+++ N V +G+ A ++SS V IITG F G + + + +S
Sbjct: 27 ARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSERGLG 86
Query: 641 KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL 700
+ P + P+IAA++G A+ G + L CD + + + P ++ G GAG L
Sbjct: 87 FTNVPP---RKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLL 143
Query: 701 IFPQRFGKILSREILFTASEFKGKELKERG 730
P R ++ E+ T F ++ + G
Sbjct: 144 RLPNRIPYQVAMELALTGESFTAEDAAKYG 173
>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 256
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 43/91 (47%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
PVI A+ G A+ G + L+CD I SE + + + R G P G ++ PQ+ G L+
Sbjct: 94 PVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLA 153
Query: 712 REILFTASEFKGKELKERGISMPVLPRKQVL 742
R + T ++ G+ V+ +L
Sbjct: 154 RRMSLTGDYLSAQDALRAGLVTEVVAHDDLL 184
>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
Length = 255
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 39/80 (48%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
PVIA + G A+G G ++ L CD + + S +Q + R G P G++ + P G+ +
Sbjct: 94 PVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRART 153
Query: 712 REILFTASEFKGKELKERGI 731
+ TA + E G+
Sbjct: 154 SRMAMTAEKISAATAFEWGM 173
>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase
pdb|1DCI|B Chain B, Dienoyl-Coa Isomerase
pdb|1DCI|C Chain C, Dienoyl-Coa Isomerase
Length = 275
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 634 ISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFT 693
ISR+ +K++ + C PVIAA+ G IG G + CD ++++ +Q + G
Sbjct: 93 ISRY--QKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLA 150
Query: 694 PGAGSTLIFPQRFG-KILSREILFTASEFKGKELKERGISMPVLPRKQVLF 743
G+ P+ G + L E+ FTA + E + G+ V P K V+
Sbjct: 151 ADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVML 201
>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
Length = 261
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 12/173 (6%)
Query: 578 NYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG---- 633
N+ + +S V +T+ + +V++I G +F+ G + + +
Sbjct: 22 NHAPANAXSSQVXHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQAT 81
Query: 634 ----ISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMR 689
+ + T E+ C PVIAA+ G A+G G C +E + P +
Sbjct: 82 ELAQLGQVTFERVE----KCSKPVIAAIHGAALGGGLEFAXSCHXRFATESAKLGLPELT 137
Query: 690 YGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
G PG T P+ GK + E T++ G E + G+ V + L
Sbjct: 138 LGLIPGFAGTQRLPRYVGKAKACEXXLTSTPITGAEALKWGLVNGVFAEETFL 190
>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 276
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 41/84 (48%)
Query: 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGK 708
C+IPV+AA+ G A+G G ++ D +E + P+++ G G L +P
Sbjct: 121 CRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISL 180
Query: 709 ILSREILFTASEFKGKELKERGIS 732
+L++E T + + E G++
Sbjct: 181 LLAKEYALTGTRISAQRAVELGLA 204
>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|B Chain B, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|C Chain C, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
Length = 296
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG----GTKEGLLK-------- 629
++ N + + + F+ I+ + ++I+G F G +L+
Sbjct: 52 RNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVAR 111
Query: 630 ----IQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS 685
++ I+R+ ++++ + C PVIAA+ G IG G + CD ++++ +Q
Sbjct: 112 ISWYLRDIITRY--QETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQV 169
Query: 686 PYMRYGFTPGAGSTLIFPQRFG-KILSREILFTASEFKGKELKERGISMPVLPRKQVLF 743
+ G G+ P+ G + L E+ FTA + E G+ V P K+V+
Sbjct: 170 KEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVML 228
>pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|B Chain B, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|C Chain C, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|D Chain D, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|E Chain E, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|F Chain F, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T89|A Chain A, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|B Chain B, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|C Chain C, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|D Chain D, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|E Chain E, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|F Chain F, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
Length = 289
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 6/155 (3%)
Query: 589 VVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKE------GLLKIQKGISRFTDEKS 642
VK + A + VII+TG + C G + G K G+
Sbjct: 56 TVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDF 115
Query: 643 YCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIF 702
C PV+A + G++IG G + + CD TI ++ +++ + G G
Sbjct: 116 QRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYM 175
Query: 703 PQRFGKILSREILFTASEFKGKELKERGISMPVLP 737
+ G+ +REI F ++ K+ + G+ V+P
Sbjct: 176 ARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVP 210
>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
pdb|2UZF|B Chain B, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Query: 590 VKGITDAFSYINSSVQYKVIIITGYENYFACGGTKE-----GLLKIQKGISRFTDEKSYC 644
V + DAFS VI++TG + C G + G + I R
Sbjct: 42 VAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQR 101
Query: 645 MPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG-FTPGAGSTLIFP 703
+ PVIA ++G+A+G G + + CD TI ++ +++ + G F G GS +
Sbjct: 102 LIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYL-A 160
Query: 704 QRFGKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
+ G +REI + ++ +E + G+ V+P ++V
Sbjct: 161 RIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLEKV 198
>pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELW|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELX|A Chain A, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|B Chain B, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|C Chain C, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|D Chain D, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|E Chain E, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|F Chain F, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
Length = 285
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 6/155 (3%)
Query: 589 VVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKE------GLLKIQKGISRFTDEKS 642
VK + A + VII+TG + C G + G K G+
Sbjct: 52 TVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDF 111
Query: 643 YCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIF 702
C PV+A + G++IG G + + CD TI ++ +++ + G G
Sbjct: 112 QRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYM 171
Query: 703 PQRFGKILSREILFTASEFKGKELKERGISMPVLP 737
+ G+ +REI F ++ K+ + G+ V+P
Sbjct: 172 ARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVP 206
>pdb|3R9Q|A Chain A, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|B Chain B, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|C Chain C, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 262
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
PVIAA+ GHA+ G + L+CD + E++V R+G G T+ P+ G +
Sbjct: 103 PVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRA 162
Query: 712 REILFTASEFKGKELKERGISMPVLPRKQ 740
+++ T E + G+ V+ R Q
Sbjct: 163 MDLILTGRPVHANEALDIGLVNRVVARGQ 191
>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|B Chain B, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|C Chain C, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
Length = 272
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 590 VKGITDAFSYINSSVQYKVIIITGYENYFACGGTKE-----GLLKIQKGISRFTDEKSYC 644
V + DAF+ VII+TG C G + G + I R
Sbjct: 41 VNEMIDAFTKARDDSNIGVIILTGAGGKAFCSGGDQKVRGHGGYVGEDEIPRLNVLDLQR 100
Query: 645 MPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQ 704
+ PVIA + G+AIG G + + CD TI ++ +++ + G G +
Sbjct: 101 LIRVIPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGAGYLAR 160
Query: 705 RFGKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
G +REI + ++ +E E G+ V+P +Q+
Sbjct: 161 IVGHKKAREIWYLCRQYTAQEALEMGLVNKVVPLEQL 197
>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|B Chain B, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|C Chain C, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|D Chain D, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|E Chain E, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|F Chain F, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
Length = 254
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 49/91 (53%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
P++ A+ G A GAG ++ L+ D + + + + + ++R G P +G + + P+ G +
Sbjct: 93 PLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKA 152
Query: 712 REILFTASEFKGKELKERGISMPVLPRKQVL 742
+E+L + +E G+ V+P ++++
Sbjct: 153 QELLLLSPRLSAEEALALGLVHRVVPAEKLM 183
>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
Length = 261
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
PVIAA+ G+A+ G + L+CD + +++V+ R+G G T+ P+ G +
Sbjct: 100 PVIAAVSGYAVAGGLELALWCDLRVAEQDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRA 159
Query: 712 REILFTASEFKGKELKERGISMPVLPRKQ 740
+++ T + E G++ V+P Q
Sbjct: 160 MDMILTGRAVQADEALAIGLANRVVPNGQ 188
>pdb|2J5G|D Chain D, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
Length = 263
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS-PYMRYGFTPGAGSTLIFPQRFGK 708
++PVI+A+ G A+ + L D + SE +V+Q P++ G PG G +++P G
Sbjct: 117 EVPVISAVNGAALLHSEYI-LTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGL 175
Query: 709 ILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
R LFT + ++ E + VLP+ +++
Sbjct: 176 YRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLM 209
>pdb|2J5G|A Chain A, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|B Chain B, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|C Chain C, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|E Chain E, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|F Chain F, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|G Chain G, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|H Chain H, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|I Chain I, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|J Chain J, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|K Chain K, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|L Chain L, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5S|A Chain A, Structural Of Abdh, A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120 Bound To (S)-3-
Oxocyclohexyl Acetic Acid
pdb|2J5S|B Chain B, Structural Of Abdh, A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120 Bound To (S)-3-
Oxocyclohexyl Acetic Acid
Length = 263
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS-PYMRYGFTPGAGSTLIFPQRFGK 708
++PVI+A+ G A+ + L D + SE +V+Q P++ G PG G +++P G
Sbjct: 117 EVPVISAVNGAALLHSEYI-LTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGL 175
Query: 709 ILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
R LFT + ++ E + VLP+ +++
Sbjct: 176 YRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLM 209
>pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase
pdb|3ZEN|E Chain E, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase
pdb|3ZEN|F Chain F, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase
pdb|4B3Y|A Chain A, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase
pdb|4B3Y|B Chain B, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase
pdb|4B3Y|C Chain C, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase
Length = 3089
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 82/393 (20%), Positives = 153/393 (38%), Gaps = 51/393 (12%)
Query: 184 FDPLFFNISPSEAEYMDPQQRLFLQNCWTCIE---DAGYNPFSL----SGSLCGVFVGCA 236
FDP + ISP A +D R+ L N ++ +G+ P L S G
Sbjct: 2629 FDPTVWGISPDMASSID---RVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTG 2685
Query: 237 VSDYNKLITDPKMYNAYALMGES------VSILPARVS-----YFLNLQGPCLAIDTACS 285
+ + T MY+ L+G + +LP V+ ++ G + AC+
Sbjct: 2686 MGGMTSMQT---MYHG-NLLGRAKPNDILQEVLPNVVAAHVMQSYVGGYGAMVHPVGACA 2741
Query: 286 SSLVAIAHACDSLILGNSKIALAGGV------YIINTPDI----HIKMSKSGMLSPDGHC 335
++ V++ D + LG + + +AGG II D+ +M ++ +S
Sbjct: 2742 TAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIGFGDMAATADTEMMRAKGISDSKFS 2801
Query: 336 YSFDQRANGFVPGEGVGVXXXXXXXXXXXXXXXIYCIIKGWGVNQDGKTNGITAPNTKS- 394
+ D+R GF+ +G G + ++ DG I AP +
Sbjct: 2802 RANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGAL 2861
Query: 395 ------QIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIE---FEALCESFNKFSYHK 445
+ + + + +DI ++ H T T DP E E + +S + +
Sbjct: 2862 GAARGGRESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNP 2921
Query: 446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINT 505
F S K+ GH+ A V M+ + L+ V+PP + + +++ +L S F+
Sbjct: 2922 LFIV--SQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDCVDD--ELATSGHFVWV 2977
Query: 506 KCKSWDIKNKKKRMAA-INSFGFSGTNAHIVLM 537
+ + D++ K A + S GF + + L+
Sbjct: 2978 R-EPLDLRGKFPLKAGLVTSLGFGHVSGLVALV 3009
>pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|B Chain B, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|C Chain C, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|D Chain D, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|E Chain E, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|F Chain F, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
Length = 266
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
P+I A++G AIG G + L D +++Q P++ G +P G++ + ++ G +
Sbjct: 101 PLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKA 160
Query: 712 REILFTASEFKGKELKERGI 731
E+LFTA +F + + G+
Sbjct: 161 AELLFTAKKFNAETALQAGL 180
>pdb|3Q1T|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 278
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 62/146 (42%), Gaps = 5/146 (3%)
Query: 591 KGITDAFSYINSSVQYKVIIITGYENYFACGGT----KEGLLKIQKGISRFTDEKSYCMP 646
+ + D + I+ + +++ G F+ GG+ E + Q I + +
Sbjct: 49 RDLADIWPVIDRDPAVRAVLVRGEGKAFSSGGSFDLIDETIGDYQGRIRIMREARDLVHN 108
Query: 647 LY-CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQR 705
+ C PV++A++G A+GAG + L D ++ + + + G G + + +P
Sbjct: 109 MINCDTPVVSAIRGPAVGAGLVVALLADISVAGRTAKLIDGHTKLGVAAGDHAAICWPLL 168
Query: 706 FGKILSREILFTASEFKGKELKERGI 731
G ++ L T G+E + G+
Sbjct: 169 VGMAKAKYYLLTCETLLGEEAERIGL 194
>pdb|3M6M|A Chain A, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|B Chain B, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|C Chain C, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6N|A Chain A, Crystal Structure Of Rpff
pdb|3M6N|B Chain B, Crystal Structure Of Rpff
pdb|3M6N|C Chain C, Crystal Structure Of Rpff
Length = 305
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 642 SYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS-PYMRYGFTPGAGSTL 700
++ + L + IA +QG+A+G G+ L C +TI +EE V P + + PG G+
Sbjct: 132 AFHVGLGARAHSIALVQGNALGGGFEAALSC-HTIIAEEGVMMGLPEVLFDLFPGMGAYS 190
Query: 701 IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740
QR L+++I+ + + ++L G+ V+PR Q
Sbjct: 191 FMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQ 230
>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|B Chain B, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|C Chain C, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|D Chain D, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|E Chain E, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|F Chain F, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium
Length = 288
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Query: 608 VIIITGYENYFACGGTKE------GLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA 661
VII+TG + C G + G + G+ C PV+A + G++
Sbjct: 74 VIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVVAXVAGYS 133
Query: 662 IGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEF 721
IG G + CD TI +E +++ + G G + G+ +REI F ++
Sbjct: 134 IGGGHVLHXXCDLTIAAENAIFGQTGPKVGSFDGGWGASYXARIVGQKKAREIWFLCRQY 193
Query: 722 KGKELKERGISMPVLP 737
++ + G+ V+P
Sbjct: 194 DAQQALDXGLVNTVVP 209
>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 290
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA-GSTLIFPQRFGKIL 710
PVIAA+ G AIG G + L CD + S+++ +++ + G T G + + P+ G
Sbjct: 125 PVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGTSR 184
Query: 711 SREILFTASEFKGKELKERGI 731
+ +I+ T + E + G+
Sbjct: 185 ASDIMLTGRDVDADEAERIGL 205
>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|B Chain B, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|C Chain C, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
Length = 273
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 9/168 (5%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
+++ N V + DA + ++ITG + C G L I +G + + E
Sbjct: 35 ARNAVNGAVSTAVGDALEEAQRDPEVWAVVITGAGDKSFCAGAD--LKAISRGENLYHAE 92
Query: 641 K------SYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTP 694
Y K P IAA+ G A+G G + L D I E + + P ++ G
Sbjct: 93 HPEWGFAGYVHHFIDK-PTIAAVNGTALGGGSELALASDLVIACESASFGLPEVKRGLIA 151
Query: 695 GAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
GAG ++ + ++ E++ T + G+ V+P V+
Sbjct: 152 GAGGVFRIVEQLPRKVALELVLTGEPMTASDALRWGLINEVVPDGTVV 199
>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|B Chain B, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|C Chain C, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|D Chain D, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|E Chain E, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|F Chain F, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|G Chain G, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|H Chain H, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|I Chain I, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
Length = 287
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 15/190 (7%)
Query: 560 PLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFA 619
P SA+ L I ++ N ++ + ++K + + S KVIII+ F+
Sbjct: 34 PTSARQLDG--IRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFS 91
Query: 620 CGGTKEGLLKIQKGISRFTDEKSYCMPLYCKI-----PVIAAMQGHAIGAGWAMGLFCDY 674
G + L + ++G + C + I PVIA + G A AG + CD
Sbjct: 92 SGHDLKELTE-EQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDI 150
Query: 675 TIFSEESVYQSPYMRYGF---TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGI 731
+ S++S + +P + G TPG P++ ++ E+LFT +E G+
Sbjct: 151 AVASDKSSFATPGVNVGLFCSTPGVALARAVPRK----VALEMLFTGEPISAQEALLHGL 206
Query: 732 SMPVLPRKQV 741
V+P ++
Sbjct: 207 LSKVVPEAEL 216
>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
pdb|3HIN|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
Length = 275
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 15/137 (10%)
Query: 605 QYKVIIITGYENYFACG---------GTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIA 655
Q + ++I G ++F+ G EGL+ Q T + + YC++PVIA
Sbjct: 58 QIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQ------TWHRVFDKIQYCRVPVIA 111
Query: 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREIL 715
A++G IG G + + + Y P G G G ++ P+ G +++
Sbjct: 112 ALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMM 171
Query: 716 FTASEFKGKELKERGIS 732
T + E G S
Sbjct: 172 LTGRVYSAAEGVVHGFS 188
>pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|B Chain B, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|C Chain C, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|D Chain D, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|E Chain E, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|F Chain F, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
Length = 275
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYG-FTPGAGSTLIFPQRFGKILS 711
VIA + G+AIG G + L CD TI ++ +++ + G F G GS+ + + G+ +
Sbjct: 112 VIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYL-ARIVGQKKA 170
Query: 712 REILFTASEFKGKELKERGISMPVLP 737
REI + ++ +E + G+ V+P
Sbjct: 171 REIWYLCRQYSAQEAERMGMVNTVVP 196
>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
Length = 715
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFG 707
+P +AA+ G A+G G M L D+ + ++ + P ++ G PG G T+ P+ G
Sbjct: 104 VPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIG 160
>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|C Chain C, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|D Chain D, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|E Chain E, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|F Chain F, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
Length = 279
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSP--YMRYGFTPGAGSTLIFPQRFGKI 709
P IAA+QG I G + CD I +E++++ P M G G T G
Sbjct: 119 PSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDIGGVEYHGHTW----ELGPR 174
Query: 710 LSREILFTASEFKGKELKERGISMPVLPRKQV 741
++EILFT +E+ + G+ V+PR ++
Sbjct: 175 KAKEILFTGRAMTAEEVAQTGMVNRVVPRDRL 206
>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|B Chain B, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|C Chain C, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
Length = 267
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
+++ N+ V G+ DA + + +++TG + C G + ++ + D
Sbjct: 29 ARNAVNAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYH-PDH 87
Query: 641 KSYCMPLYCK----IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA 696
+ Y + P IAA+ G A+G G + L D + E + + P ++ G A
Sbjct: 88 PEWGFAGYVRHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAA 147
Query: 697 GSTLIFPQRFGKILSREILFTASEFKGKELKERGI 731
G ++ + ++ +L T ++ G+
Sbjct: 148 GGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGL 182
>pdb|3QK8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
Length = 272
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Query: 591 KGITDAFSYINSSVQYKVIIITGYENYFACGGT----KEGLLKIQKGISRFTDEKSYCMP 646
+ + D + I+ +V+++ G F+ GG+ E + + I + + +
Sbjct: 43 RDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIRIMREARDLVLN 102
Query: 647 LY-CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQR 705
L PV++A++G A+GAG + L D ++ S + + + G G + + +P
Sbjct: 103 LVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLL 162
Query: 706 FGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
G ++ L T G+E + G+ + +VL
Sbjct: 163 VGMAKAKYYLLTCETLSGEEAERIGLVSTCVDDDEVL 199
>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|B Chain B, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|C Chain C, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
Length = 267
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE 640
+++ N+ V G+ DA + + +++TG + C G + ++ + D
Sbjct: 29 ARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYH-PDH 87
Query: 641 KSYCMPLYCK----IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA 696
+ Y + P IAA+ G A+G G + L D + E + + P ++ G A
Sbjct: 88 PEWGFAGYVRHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAA 147
Query: 697 GSTLIFPQRFGKILSREILFTASEFKGKELKERGI 731
G ++ + ++ +L T ++ G+
Sbjct: 148 GGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGL 182
>pdb|1SZO|A Chain A, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|B Chain B, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|C Chain C, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|D Chain D, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|E Chain E, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|F Chain F, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|G Chain G, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|H Chain H, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|I Chain I, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|J Chain J, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|K Chain K, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
pdb|1SZO|L Chain L, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase
His122ala Mutant Bound To Its Natural Product (2s,4s)-
Alpha-Campholinic Acid
Length = 257
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS-PYMRYGFTPGAGSTLIFPQR 705
L ++PVIAA+ G A + + D + +E + +Q P+ G PG G+ +++P
Sbjct: 105 LSIEVPVIAAVNGPVTNAP-EIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHV 163
Query: 706 FGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
G R L T E + + G VL +++L
Sbjct: 164 LGSNRGRYFLLTGQELDARTALDYGAVNEVLSEQELL 200
>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 264
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 23/149 (15%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEG----------LLKIQKGIS 635
NS +V+ +T A + I++TG F G G L+++ K +
Sbjct: 46 NSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDAFAADYPDRLIELHKAMD 104
Query: 636 RFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPG 695
+PV+ A+ G AIGAG + + CD + + ++ +Q P +YG
Sbjct: 105 A------------SPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALD 152
Query: 696 AGSTLIFPQRFGKILSREILFTASEFKGK 724
S G +R +L +A + +
Sbjct: 153 NWSIRRLSSLVGHGRARAMLLSAEKLTAE 181
>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
Length = 263
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 601 NSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPV------- 653
N + + +I+ + + YF+ G E LL S + + +C + +
Sbjct: 45 NETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCVLEIFTSPKVT 104
Query: 654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSRE 713
+A + G+A G G+ M L CD I + + + + G +P G++ P+ G +
Sbjct: 105 VALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMN 164
Query: 714 ILFTASEFKGKELKERGISMPVLPRKQVL 742
+L F +E G+ + KQ L
Sbjct: 165 LLLEGKLFTSEEALRLGLIQEICENKQEL 193
>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRF 706
+Y K P IA + G G G+A + CD I ++E+ + + YG PG +
Sbjct: 104 MYAK-PTIAMVNGWCFGGGFAPLVACDLAICADEATFGLSEINYGIPPGNLVSKAMADTV 162
Query: 707 GKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
G S + T F G++ E G+ +P Q+
Sbjct: 163 GHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQL 197
>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RFTDEKSY 643
+ TV++ + + S K I+I G F G G G++ DE
Sbjct: 30 SPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGLALGSLVDE--- 86
Query: 644 CMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFP 703
+ Y K PV+AA+QG A+G G + L C Y I + ++ P + G PGA T + P
Sbjct: 87 -IQRYQK-PVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLP 144
Query: 704 QRFGKILSREILFTASEFKGKELKERGI 731
+ G ++ +++ + E GI
Sbjct: 145 RVVGVPVALDLITSGKYLSADEALRLGI 172
>pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RFTDEKSY 643
+ TV++ + + S K I+I G F G G G++ DE
Sbjct: 45 SPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGLALGSLVDE--- 101
Query: 644 CMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFP 703
+ Y K PV+AA+QG A+G G + L C Y I + ++ P + G PGA T + P
Sbjct: 102 -IQRYQK-PVLAAIQGVALGGGLELALGCHYRIANAKARVGLPAVTLGILPGARGTQLLP 159
Query: 704 QRFGKILSREILFTASEFKGKELKERGI 731
+ G ++ +++ + E GI
Sbjct: 160 RVVGVPVALDLITSGKYLSADEALRLGI 187
>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|B Chain B, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|C Chain C, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
Length = 269
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 585 KNSTVVKG---ITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTD-- 639
+N+ VK +TDA + ++ITG E+ F C G + + KG++ D
Sbjct: 24 RNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAF-CAGFYLREIPLDKGVAGVRDHF 82
Query: 640 -------EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
++ + K PV+AA+ G A G G + L D I ++ + + + G
Sbjct: 83 RIAALWWQQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGI 142
Query: 693 TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740
++ + G + E++ T +E K+ G+ V P+ +
Sbjct: 143 GNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDE 190
>pdb|1HZD|A Chain A, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|B Chain B, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|C Chain C, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|D Chain D, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|E Chain E, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|F Chain F, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|2ZQQ|A Chain A, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|B Chain B, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|C Chain C, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|D Chain D, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|E Chain E, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|F Chain F, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQR|A Chain A, Crystal Structure Of Auh Without Rna
pdb|2ZQR|B Chain B, Crystal Structure Of Auh Without Rna
pdb|2ZQR|C Chain C, Crystal Structure Of Auh Without Rna
pdb|2ZQR|D Chain D, Crystal Structure Of Auh Without Rna
pdb|2ZQR|E Chain E, Crystal Structure Of Auh Without Rna
pdb|2ZQR|F Chain F, Crystal Structure Of Auh Without Rna
Length = 272
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 578 NYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGT--KEGLLKIQKGIS 635
N +SK+L +K ++ A + S + + III C G KE +
Sbjct: 34 NSLSKNL-----IKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVG 88
Query: 636 RFTDEKSYCMPLYCKIPV--IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFT 693
F + + +PV IAA+ G A+G G + L CD + + + +
Sbjct: 89 PFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAII 148
Query: 694 PGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740
PG G T P+ G L++E++F+A GKE K G+ VL + Q
Sbjct: 149 PGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQ 195
>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RFTDEKSY 643
+ TV++ + + S K I+I G F G G G++ DE
Sbjct: 45 SPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGLALGSLVDE--- 101
Query: 644 CMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFP 703
+ Y K PV+AA+QG A+G G + L C Y I + ++ P + G PGA T + P
Sbjct: 102 -IQRYQK-PVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLP 159
Query: 704 QRFGKILSREILFTASEFKGKELKERGI 731
+ G ++ +++ + E GI
Sbjct: 160 RVVGVPVALDLITSGKYLSADEALRLGI 187
>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|B Chain B, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|C Chain C, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|D Chain D, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|E Chain E, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|F Chain F, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 282
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 16/172 (9%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS----- 635
+ + +N ++ + A++ + KVII+ +F+ G G ++ + IS
Sbjct: 43 AANAQNPELLDELDAAWTRAAEDNEVKVIILRANGKHFSAGHDLRGGGEVPEKISLEFII 102
Query: 636 -----RFTDEKSYCMPLY-CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMR 689
R+ D Y + P IAA+QG I G + CD + S+++++ P
Sbjct: 103 QHEARRYLD---YTLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLILASDDALFSDPVAL 159
Query: 690 YGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
G G G ++EILFT +E + G+ V+ R ++
Sbjct: 160 MGI--GGVEYHGHTWELGPRKAKEILFTGRALTAEEAERTGMVNRVVARDEL 209
>pdb|2A7K|A Chain A, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|B Chain B, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|C Chain C, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|D Chain D, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|E Chain E, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|F Chain F, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|G Chain G, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|H Chain H, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|I Chain I, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A81|A Chain A, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|B Chain B, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|C Chain C, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
Length = 250
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 588 TVVKGITDAFSYINSSVQYK-VIIITGYENYFACGGTKEGLLK------IQKGISRFTDE 640
T+ + DA + N+ + V++ G E F+ GG + + I++ I R D
Sbjct: 27 TLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVID- 85
Query: 641 KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL 700
Y L P IAA+ G+AIG G+ L D + + + + P +++G G+ +
Sbjct: 86 -LYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAAI 144
Query: 701 I-FPQRFGKILSREILF 716
+ F F + +EI++
Sbjct: 145 LGFTHGFSTM--QEIIY 159
>pdb|2PG8|A Chain A, Crystal Structure Of R254k Mutanat Of Dpgc With Bound
Substrate Analog
pdb|2PG8|B Chain B, Crystal Structure Of R254k Mutanat Of Dpgc With Bound
Substrate Analog
pdb|2PG8|C Chain C, Crystal Structure Of R254k Mutanat Of Dpgc With Bound
Substrate Analog
Length = 417
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 629 KIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYM 688
K+ +G+ D + + P +AA+ G AIG G + L D + S ++ + P
Sbjct: 252 KLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAA 311
Query: 689 RYGFTPGAGSTLIFPQRF-GKILSREILFTASEFKGKELKER 729
+ G PGA + + RF G +SR+++ KE + R
Sbjct: 312 KEGIIPGAANLRL--GRFAGPRVSRQVILEGRRIWAKEPEAR 351
>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus
Thermophilus Hb8
Length = 253
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
P +AA+ G A+ G + L CD + EE+ ++ GF A ++I + G+ +
Sbjct: 96 PTVAAVNGPAVAGGAGLALACDLVVXDEEARLGYTEVKIGFV-AALVSVILVRAVGEKAA 154
Query: 712 REILFTASEFKGKELKERGISMPVLPRKQVL 742
+++L T + +E K G+ + P + L
Sbjct: 155 KDLLLTGRLVEAREAKALGLVNRIAPPGKAL 185
>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|B Chain B, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|C Chain C, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 265
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 4/161 (2%)
Query: 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE----K 641
++ +V A+ I+ + I+TG + + GG ++ G + D K
Sbjct: 34 STNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLSDGWMVRDGSAPPLDPATIGK 93
Query: 642 SYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLI 701
+ P+IAA+ G +G G M D + E + + P ++ G PGAGS +
Sbjct: 94 GLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVR 153
Query: 702 FPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
++ + E++ T E G+ V+P L
Sbjct: 154 LKRQIPYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAGTAL 194
>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
pdb|1NZY|C Chain C, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 13/168 (7%)
Query: 585 KNSTVVKG---ITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE- 640
+N+ VK +TDA + ++ITG E+ F C G + + KG++ D
Sbjct: 24 RNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAF-CAGFYLREIPLDKGVAGVRDHF 82
Query: 641 --------KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
+ + K PV+AA+ G A G G + L D I ++ + + + G
Sbjct: 83 RIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGI 142
Query: 693 TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740
++ + G + E++ T +E K+ G+ V P+ +
Sbjct: 143 GNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDE 190
>pdb|2NP9|A Chain A, Crystal Structure Of A Dioxygenase In The Crotonase
Superfamily
pdb|2NP9|B Chain B, Crystal Structure Of A Dioxygenase In The Crotonase
Superfamily
pdb|2NP9|C Chain C, Crystal Structure Of A Dioxygenase In The Crotonase
Superfamily
Length = 440
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 629 KIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYM 688
K+ +G+ D + + P +AA+ G AIG G + L D + S ++ + P
Sbjct: 263 KLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAA 322
Query: 689 RYGFTPGAGSTLIFPQRF-GKILSREILFTASEFKGKELKER 729
+ G PGA + + RF G +SR+++ KE + R
Sbjct: 323 KEGIIPGAANLRL--GRFAGPRVSRQVILEGRRIWAKEPEAR 362
>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 13/168 (7%)
Query: 585 KNSTVVKG---ITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDE- 640
+N+ VK +TDA + ++ITG E+ F C G + + KG++ D
Sbjct: 24 RNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAF-CAGFYLREIPLDKGVAGVRDHF 82
Query: 641 --------KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF 692
+ + K PV+AA+ G A G G + L D I ++ + + + G
Sbjct: 83 RIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGI 142
Query: 693 TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740
++ + G + E++ T +E K+ G+ V P+ +
Sbjct: 143 GNDTATSYSLARIVGMRRAMELMLTDRTLYPEEAKDWGLVSRVYPKDE 190
>pdb|1O8U|A Chain A, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|B Chain B, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|C Chain C, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|D Chain D, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|E Chain E, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
pdb|1O8U|F Chain F, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New
Structural Diversity In The Crotonase Superfamily
Length = 257
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQS-PYMRYGFTPGAGSTLIFPQR 705
L ++PVIAA+ G + + + D + +E + +Q P+ G PG G+ +++P
Sbjct: 105 LSIEVPVIAAVNG-PVTNHPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHV 163
Query: 706 FGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742
G R L T E + + G VL +++L
Sbjct: 164 LGSNRGRYFLLTGQELDARTALDYGAVNEVLSEQELL 200
>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRF 706
+Y K P IA + G G G++ + CD I ++E+ + + YG PG +
Sbjct: 104 MYAK-PTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINYGIPPGNLVSKAMADTV 162
Query: 707 GKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
G S + T F G++ E G+ +P Q+
Sbjct: 163 GHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQL 197
>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRF 706
+Y K P IA + G G G+A + CD I ++E+ + + +G PG +
Sbjct: 104 MYAK-PTIAMVNGWCFGGGFAPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTV 162
Query: 707 GKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
G S + T F G++ E G+ +P Q+
Sbjct: 163 GHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQL 197
>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 275
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRF 706
+Y K P IA + G G G+A + CD I ++E+ + + +G PG +
Sbjct: 104 MYAK-PTIAMVNGWCFGGGFAPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTV 162
Query: 707 GKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
G S + T F G++ E G+ +P Q+
Sbjct: 163 GHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQL 197
>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|B Chain B, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|D Chain D, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRF 706
+Y K P IA + G G G+A + CD I ++E+ + + +G PG +
Sbjct: 104 MYAK-PTIAMVNGWCFGGGFAPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTV 162
Query: 707 GKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
G S + T F G++ E G+ +P Q+
Sbjct: 163 GHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQL 197
>pdb|3H0U|A Chain A, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
pdb|3H0U|B Chain B, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
pdb|3H0U|C Chain C, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
Length = 289
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 653 VIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
IA ++G A GAG L CD S E ++ P + G PGAG+ + G+ +
Sbjct: 106 TIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRA 165
Query: 712 REILFTASEFKGKELKER 729
E + T+S+F +L ER
Sbjct: 166 LEAVLTSSDFDA-DLAER 182
>pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From
Mycobacterium Marinum
Length = 298
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 607 KVIIITGYENYFACG---GTKEGLLKIQKGISRFTD--------EKSYCMPLYCKIPVIA 655
+VI++TG F G G+ + K +++ D E+ + PVIA
Sbjct: 76 RVIVLTGRGRGFCAGAYLGSADAAAGYDKTMAKAKDANLADLVGERPPHFVTMLRKPVIA 135
Query: 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREIL 715
A+ G +G G L CD + + + + + R G G + I P+ ++ ++L
Sbjct: 136 AINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSWAVALDLL 195
Query: 716 FTASEFKGKELKERGISMPVLPRKQVL 742
+ F +E + G+ V+ +Q++
Sbjct: 196 LSGRTFLAEEAAQLGLVKEVVTPEQLM 222
>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 267
Score = 39.3 bits (90), Expect = 0.009, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKI 709
++PVIAA+ GH G+ + CD + S + R G P S + P+ +
Sbjct: 108 RLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLPKLSARA 167
Query: 710 LSREILFTASEFKGKELKERGI 731
+R L T +F + +E G+
Sbjct: 168 AARYYL-TGEKFDARRAEEIGL 188
>pdb|1HNO|A Chain A, Crystal Structure Of Peroxisomal Delta3-delta2-enoyl-coa
Isomerase From Saccharomyces Cerevisiae
pdb|1HNU|A Chain A, Crystal Structure Of Peroxisomal Delta3-Delta2-Enoyl-Coa
Isomerase From Saccharomyces Cerevisiae
pdb|1K39|A Chain A, The Structure Of Yeast Delta3-delta2-enoyl-coa Isomerase
Complexed With Octanoyl-coa
pdb|1K39|B Chain B, The Structure Of Yeast Delta3-delta2-enoyl-coa Isomerase
Complexed With Octanoyl-coa
pdb|1K39|C Chain C, The Structure Of Yeast Delta3-delta2-enoyl-coa Isomerase
Complexed With Octanoyl-coa
pdb|1PJH|A Chain A, Structural Studies On Delta3-Delta2-Enoyl-Coa Isomerase:
The Variable Mode Of Assembly Of The Trimeric Disks Of
The Crotonase Superfamily
pdb|1PJH|B Chain B, Structural Studies On Delta3-Delta2-Enoyl-Coa Isomerase:
The Variable Mode Of Assembly Of The Trimeric Disks Of
The Crotonase Superfamily
pdb|1PJH|C Chain C, Structural Studies On Delta3-Delta2-Enoyl-Coa Isomerase:
The Variable Mode Of Assembly Of The Trimeric Disks Of
The Crotonase Superfamily
Length = 280
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 17/145 (11%)
Query: 601 NSSVQYKVIIITGYENYFACGGTKEGLLKIQ------------KGISRFTDEKSYCMPLY 648
N V + +I +G +F+ G +G+ K Q K +S F Y +
Sbjct: 51 NRDVYFTIIQSSG--RFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVARNVYVTDAF 108
Query: 649 CKIP--VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQ-SPYMRYGFTPGAGSTLIFPQR 705
K +I + G AIG A+ CD + VY P+ G G+T+ P +
Sbjct: 109 IKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLK 168
Query: 706 FGKILSREILFTASEFKGKELKERG 730
FG + E L FK + E G
Sbjct: 169 FGTNTTYECLMFNKPFKYDIMCENG 193
>pdb|3SWX|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SWX|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SWX|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 38.9 bits (89), Expect = 0.013, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
P++ A+ G + G + L D I E + + + G P G+T+ FP+ G +
Sbjct: 104 PLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNA 163
Query: 712 REILFTASEFKGKELKERGISMPVLP 737
+ TA F E GI ++P
Sbjct: 164 MRWMLTADTFDAVEAHRIGIVQEIVP 189
>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRF 706
+Y K P IA + G G G++ + CD I ++E+ + + +G PG +
Sbjct: 104 MYAK-PTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTV 162
Query: 707 GKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
G S + T F G++ E G+ +P Q+
Sbjct: 163 GHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLAQL 197
>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRF 706
+Y K P IA + G G G++ + CD I ++E+ + + +G PG +
Sbjct: 104 MYAK-PTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTV 162
Query: 707 GKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
G S + T F G++ E G+ +P Q+
Sbjct: 163 GHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQL 197
>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRF 706
+Y K P IA + G G G++ + CD I ++E+ + + +G PG +
Sbjct: 104 MYAK-PTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTV 162
Query: 707 GKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
G S + T F G++ E G+ +P Q+
Sbjct: 163 GHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQL 197
>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|C Chain C, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|D Chain D, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|E Chain E, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|F Chain F, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|G Chain G, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|H Chain H, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|J Chain J, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|K Chain K, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|L Chain L, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2VSS|A Chain A, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|B Chain B, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|C Chain C, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|D Chain D, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRF 706
+Y K P IA + G G G++ + CD I ++E+ + + +G PG +
Sbjct: 104 MYAK-PTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTV 162
Query: 707 GKILSREILFTASEFKGKELKERGISMPVLPRKQV 741
G S + T F G++ E G+ +P Q+
Sbjct: 163 GHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQL 197
>pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
Length = 725
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 607 KVIIITGYENYFACGGTKEGLLKIQKG-----------ISRFTDEKSYCMPLYCKIPVIA 655
K I+ITG + F+ G G ++QKG I TD + + P +A
Sbjct: 53 KAIVITGAKGRFSGGFDISGFGEMQKGNVKEPKAGYISIDIITD-----LLEAARKPSVA 107
Query: 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREIL 715
A+ G A+G G + + C I + + P ++ G PG G T P+ G + E++
Sbjct: 108 AIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMI 167
Query: 716 FTASEFKGKELKERGISMPVLPRKQVL 742
T+ K +E G+ V+P +++
Sbjct: 168 LTSKPVKAEEGHSLGLIDAVVPPAELV 194
>pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
Length = 265
Score = 38.1 bits (87), Expect = 0.020, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACG------GTKEGLLKIQKGI 634
+K+ N+ V + + DA +++ V I+TG F G E ++ +G+
Sbjct: 35 AKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVEGRGL 94
Query: 635 SRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTP 694
FT+ P+IAA++G+A+ G + L D + + +S + P ++ G
Sbjct: 95 G-FTERPP-------AKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVA 146
Query: 695 GAGSTLIFPQRFGKILSREILFTASEFKGKELKERGI 731
G G L P+R ++ E+ T + G+
Sbjct: 147 GGGGLLRLPERIPYAIAMELALTGDNLSAERAHALGM 183
>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From
Mycobacterium Marinum
Length = 256
Score = 37.7 bits (86), Expect = 0.027, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 41/91 (45%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
P+I A+ G +G G + + D S + + P+ G P A S+ + PQ G+ +
Sbjct: 101 PLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNA 160
Query: 712 REILFTASEFKGKELKERGISMPVLPRKQVL 742
+L ++ +E G+ + +++L
Sbjct: 161 AWLLMSSEWIDAEEALRMGLVWRICSPEELL 191
>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|B Chain B, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|C Chain C, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
Length = 280
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 652 PVIAAMQGHAIGAGWA-MGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKIL 710
P+IA + G A+G +GLF D S+ + + +P+ G +P S+ FP+
Sbjct: 123 PLIAVVNGPAVGISVTLLGLF-DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIXSPAK 181
Query: 711 SREILFTASEFKGKELKERGISMPVLP 737
+ E L + E +G+ V P
Sbjct: 182 ATEXLIFGKKLTAGEACAQGLVTEVFP 208
>pdb|3LAO|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas
Aeruginosa Pa01
pdb|3LAO|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas
Aeruginosa Pa01
pdb|3LAO|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas
Aeruginosa Pa01
Length = 258
Score = 36.6 bits (83), Expect = 0.063, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
P++ A+QG AG + L D + + + + + G P GST+ FP+ G +
Sbjct: 107 PLVVAVQGTCWTAGIELXLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDA 166
Query: 712 REILFTASEFKGKE-LKERGISMPVLPRKQV 741
+ T EF E L+ R ++ V P +++
Sbjct: 167 XRYILTGDEFDADEALRXRLLTEVVEPGEEL 197
>pdb|4DI1|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
Length = 277
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
P +AA+ G+A+GAG + L D+ + + + + + G PG G + G +
Sbjct: 117 PTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRA 176
Query: 712 REILFTASEFKGKE 725
+E++F+ F +E
Sbjct: 177 KELVFSGRFFDAEE 190
>pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB7|B Chain B, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB7|C Chain C, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB7|D Chain D, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB8|A Chain A, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB8|B Chain B, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB8|C Chain C, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB8|D Chain D, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB9|A Chain A, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB9|B Chain B, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB9|C Chain C, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB9|D Chain D, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
Length = 395
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 264 PARVSYF---LNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGV 311
P R + L + PC I+ C+S + AI A SL+ G+ + +AGG+
Sbjct: 71 PTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGM 121
>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
pdb|2EJ5|B Chain B, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
Length = 257
Score = 32.7 bits (73), Expect = 0.76, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 667 AMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREI 714
++ L CD+ + SE++ + ++ G P AG P+ G+ + E+
Sbjct: 111 SLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALEL 158
>pdb|1RJM|A Chain A, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|B Chain B, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|C Chain C, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJN|A Chain A, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|B Chain B, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|C Chain C, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
Length = 339
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRY--------GFTPGAGSTLIFPQ 704
VI + G A G G ++ + CD T+ S E Y R+ F G GS + Q
Sbjct: 175 VICLVNGWAAGGGHSLHVVCDLTLASRE------YARFKQTDADVGSFDGGYGSAYLARQ 228
Query: 705 RFGKILSREILFTASEFKGKELKERG 730
G+ +REI F + +++ + G
Sbjct: 229 -VGQKFAREIFFLGRTYTAEQMHQMG 253
>pdb|1Q51|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q52|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
Length = 314
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRY--------GFTPGAGSTLIFPQ 704
VI + G A G G ++ + CD T+ S E Y R+ F G GS + Q
Sbjct: 150 VICLVNGWAAGGGHSLHVVCDLTLASRE------YARFKQTDADVGSFDGGYGSAYLARQ 203
Query: 705 RFGKILSREILFTASEFKGKELKERG 730
G+ +REI F + +++ + G
Sbjct: 204 -VGQKFAREIFFLGRTYTAEQMHQMG 228
>pdb|3T8A|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8B|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
pdb|3T8B|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
Length = 334
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRY--------GFTPGAGSTLIFPQ 704
VI + G A G G ++ + CD T+ S E Y R+ F G GS + Q
Sbjct: 170 VICLVNGWAAGGGHSLHVVCDLTLASRE------YARFKQTDADVGSFDGGYGSAYLARQ 223
Query: 705 RFGKILSREILFTASEFKGKELKERG 730
G+ +REI F + +++ + G
Sbjct: 224 -VGQKFAREIFFLGRTYTAEQMHQMG 248
>pdb|2PPY|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
Length = 265
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Query: 654 IAAMQGHAIGAGWAMGLFCDYTIFSEES-VYQSPYMRYGFTPGAGSTLIFPQRFGKILSR 712
IA ++GH +G G L CD +E+ P + G G G T + G +
Sbjct: 105 IACLEGHTVGGGLEXALACDLRFXGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRAL 164
Query: 713 EILFTASEFKGKELKERGISMPVLPRKQ 740
+ T +E E G+ V P+ +
Sbjct: 165 DXNITGETITPQEALEIGLVNRVFPQAE 192
>pdb|2UV9|A Chain A, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Alpha Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described In
Remark 400
pdb|2UV9|B Chain B, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Alpha Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described In
Remark 400
pdb|2UV9|C Chain C, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Alpha Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described In
Remark 400
pdb|2UV9|D Chain D, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Alpha Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described In
Remark 400
pdb|2UV9|E Chain E, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Alpha Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described In
Remark 400
pdb|2UV9|F Chain F, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Alpha Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described In
Remark 400
pdb|2UVB|A Chain A, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Alpha Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase And
Is Described In Remark 400
pdb|2UVB|B Chain B, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Alpha Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase And
Is Described In Remark 400
pdb|2UVB|C Chain C, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Alpha Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase And
Is Described In Remark 400
pdb|2UVB|D Chain D, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Alpha Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase And
Is Described In Remark 400
pdb|2UVB|E Chain E, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Alpha Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase And
Is Described In Remark 400
pdb|2UVB|F Chain F, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Alpha Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase And
Is Described In Remark 400
Length = 1878
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 6/131 (4%)
Query: 406 FNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNI-GHSATAA 464
+ + +D+ + HGT T D E + +C+ K LG + + GH AA
Sbjct: 1510 WGLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAA 1569
Query: 465 GVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINS 524
G + + L ++P N N N +E + + S IK + ++ S
Sbjct: 1570 GAWMLNGCLQVLNTGIVPG--NRNADNVDKVMEQFDYIV---YPSRSIKTDGIKAFSVTS 1624
Query: 525 FGFSGTNAHIV 535
FGF A +
Sbjct: 1625 FGFGQKGAQAI 1635
>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
pdb|4J2U|B Chain B, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
Length = 365
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKI 709
P+++ QG G G +G + I E S P G P G T + + G+I
Sbjct: 123 PIVSLXQGFTXGGGVGLGCHARHRIVGETSQISXPECAIGLVPDVGGTHLLARAPGRI 180
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 42/185 (22%)
Query: 382 GKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESF--- 438
GK IT P +++ I+ ++Y P + L+ HG G LGD ++ LC +
Sbjct: 63 GKIEDITIPGSETNIK--ARVYYPKTQGPYGV-LVYYHGGGFVLGDIESYDPLCRAITNS 119
Query: 439 ---------------NKF--SYHKNFCALGSVKSN-----------IGHSATAAGVIGMI 470
NKF + +F AL V +N +G +A G + +
Sbjct: 120 CQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGD-SAGGNLAAV 178
Query: 471 KIILS------LKHKVLP-PTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
ILS LK++VL P ++++++ + + FF+ + W + + A +
Sbjct: 179 TAILSKKENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLL 238
Query: 524 SFGFS 528
F FS
Sbjct: 239 DFRFS 243
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 42/185 (22%)
Query: 382 GKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESF--- 438
GK IT P +++ I+ ++Y P + L+ HG G LGD ++ LC +
Sbjct: 63 GKIEDITIPGSETNIK--ARVYYPKTQGPYGV-LVYYHGGGFVLGDIESYDPLCRAITNS 119
Query: 439 ---------------NKF--SYHKNFCALGSVKSN-----------IGHSATAAGVIGMI 470
NKF + +F AL V +N +G +A G + +
Sbjct: 120 CQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGD-SAGGNLAAV 178
Query: 471 KIILS------LKHKVLP-PTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
ILS LK++VL P ++++++ + + FF+ + W + + A +
Sbjct: 179 TAILSKKENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLL 238
Query: 524 SFGFS 528
F FS
Sbjct: 239 DFRFS 243
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 42/185 (22%)
Query: 382 GKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESF--- 438
GK IT P +++ I+ ++Y P + L+ HG G LGD ++ LC +
Sbjct: 63 GKIEDITIPGSETNIK--ARVYYPKTQGPYGV-LVYYHGGGFVLGDIESYDPLCRAITNS 119
Query: 439 ---------------NKF--SYHKNFCALGSVKSN-----------IGHSATAAGVIGMI 470
NKF + +F AL V +N +G +A G + +
Sbjct: 120 CQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGD-SAGGNLAAV 178
Query: 471 KIILS------LKHKVLP-PTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
ILS LK++VL P ++++++ + + FF+ + W + + A +
Sbjct: 179 TAILSKKENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLL 238
Query: 524 SFGFS 528
F FS
Sbjct: 239 DFRFS 243
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 42/185 (22%)
Query: 382 GKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESF--- 438
GK IT P +++ I+ ++Y P + L+ HG G LGD ++ LC +
Sbjct: 63 GKIEDITIPGSETNIK--ARVYYPKTQGPYGV-LVYYHGGGFVLGDIESYDPLCRAITNS 119
Query: 439 ---------------NKF--SYHKNFCALGSVKSN-----------IGHSATAAGVIGMI 470
NKF + +F AL V +N +G +A G + +
Sbjct: 120 CQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGD-SAGGNLAAV 178
Query: 471 KIILS------LKHKVLP-PTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAIN 523
ILS LK++VL P ++++++ + + FF+ + W + + A +
Sbjct: 179 TAILSKKENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLRSFADLL 238
Query: 524 SFGFS 528
F FS
Sbjct: 239 DFRFS 243
>pdb|4GJT|A Chain A, Complex Structure Of Nectin-4 Bound To Mv-H
Length = 473
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 426 GDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGM 469
G PIE + C +++K + ++FC L +S G T +G++GM
Sbjct: 417 GVPIELQVECFTWDKKLWCRHFCVLADSES--GGHITHSGMVGM 458
>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 274
Score = 31.2 bits (69), Expect = 2.7, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711
PV+ A+ G GAG D I SE++ + P++ G AG L+ R ++L
Sbjct: 112 PVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLV--AGRELV---RVSRVLP 166
Query: 712 REI 714
R I
Sbjct: 167 RSI 169
>pdb|1N4A|A Chain A, The Ligand Bound Structure Of E.coli Btuf, The Periplasmic
Binding Protein For Vitamin B12
pdb|1N4A|B Chain B, The Ligand Bound Structure Of E.coli Btuf, The Periplasmic
Binding Protein For Vitamin B12
pdb|1N4D|A Chain A, The Ligand-Free Structure Of E Coli Btuf, The Periplasmic
Binding Protein For Vitamin B12
pdb|1N4D|B Chain B, The Ligand-Free Structure Of E Coli Btuf, The Periplasmic
Binding Protein For Vitamin B12
Length = 252
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 509 SWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQ 568
+W N ++++ + S G +E+I N + L + P A+ +Q
Sbjct: 62 AWRGGNAERQVDQLASLGIKVXWVDATSIEQIANA------LRQLAPWSPQPDKAEQAAQ 115
Query: 569 LLI--YAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYF 618
L+ YA+L Y K K + GI F+ S+Q +V+ + G EN F
Sbjct: 116 SLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIF 167
>pdb|2QI9|F Chain F, Abc-Transporter Btucd In Complex With Its Periplasmic
Binding Protein Btuf
Length = 245
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 509 SWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQ 568
+W N ++++ + S G +E+I N + L + P A+ +Q
Sbjct: 63 AWRGGNAERQVDQLASLGIKVXWVDATSIEQIANA------LRQLAPWSPQPDKAEQAAQ 116
Query: 569 LLI--YAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYF 618
L+ YA+L Y K K + GI F+ S+Q +V+ + G EN F
Sbjct: 117 SLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIF 168
>pdb|1N2Z|A Chain A, 2.0 Angstrom Structure Of Btuf, The Vitamin B12 Binding
Protein Of E. Coli
pdb|1N2Z|B Chain B, 2.0 Angstrom Structure Of Btuf, The Vitamin B12 Binding
Protein Of E. Coli
Length = 245
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 509 SWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQ 568
+W N ++++ + S G +E+I N + L + P A+ +Q
Sbjct: 63 AWRGGNAERQVDQLASLGIKVMWVDATSIEQIANA------LRQLAPWSPQPDKAEQAAQ 116
Query: 569 LLI--YAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYF 618
L+ YA+L Y K K + GI F+ S+Q +V+ + G EN F
Sbjct: 117 SLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIF 168
>pdb|4DBL|E Chain E, Crystal Structure Of E159q Mutant Of Btucdf
pdb|4DBL|J Chain J, Crystal Structure Of E159q Mutant Of Btucdf
pdb|4FI3|F Chain F, Structure Of Vitamin B12 Transporter Btucd-F In A
Nucleotide-Bound State
Length = 255
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 509 SWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQ 568
+W N ++++ + S G +E+I N + L + P A+ +Q
Sbjct: 64 AWRGGNAERQVDQLASLGIKVMWVDATSIEQIANA------LRQLAPWSPQPDKAEQAAQ 117
Query: 569 LLI--YAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYF 618
L+ YA+L Y K K + GI F+ S+Q +V+ + G EN F
Sbjct: 118 SLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIF 169
>pdb|2EH6|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase From
Aquifex Aeolicus Vf5
pdb|2EH6|B Chain B, Crystal Structure Of Acetylornithine Aminotransferase From
Aquifex Aeolicus Vf5
Length = 375
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 403 YKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNF------CALGSV 453
Y+ FN+ P+ I L + G G +G + E + +SF S+ F C G+V
Sbjct: 227 YQHFNLKPDVIALAKGLGGGVPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTV 283
>pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-coa Thiolase (t2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBU|B Chain B, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-coa Thiolase (t2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBU|C Chain C, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-coa Thiolase (t2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBU|D Chain D, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-coa Thiolase (t2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBW|A Chain A, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBW|B Chain B, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBW|C Chain C, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBW|D Chain D, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBY|A Chain A, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBY|B Chain B, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBY|C Chain C, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBY|D Chain D, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
Length = 395
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 264 PARVSYF---LNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGV 311
P R + L + PC I+ +S + AI A SL+ G+ + +AGG+
Sbjct: 71 PTRQAVLGAGLPISTPCTTINKVXASGMKAIMMASQSLMCGHQDVMVAGGM 121
>pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase
pdb|2F2S|B Chain B, Human Mitochondrial Acetoacetyl-Coa Thiolase
pdb|2F2S|C Chain C, Human Mitochondrial Acetoacetyl-Coa Thiolase
pdb|2F2S|D Chain D, Human Mitochondrial Acetoacetyl-Coa Thiolase
Length = 406
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 264 PARVSYF---LNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGV 311
P R + L + PC I+ +S + AI A SL+ G+ + +AGG+
Sbjct: 82 PTRQAVLGAGLPISTPCTTINKVXASGMKAIMMASQSLMCGHQDVMVAGGM 132
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,734,622
Number of Sequences: 62578
Number of extensions: 838319
Number of successful extensions: 1925
Number of sequences better than 100.0: 155
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1623
Number of HSP's gapped (non-prelim): 160
length of query: 829
length of database: 14,973,337
effective HSP length: 107
effective length of query: 722
effective length of database: 8,277,491
effective search space: 5976348502
effective search space used: 5976348502
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)