Query psy11396
Match_columns 829
No_of_seqs 507 out of 3813
Neff 8.2
Searched_HMMs 46136
Date Fri Aug 16 17:21:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11396.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11396hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3321 Polyketide synthase mo 100.0 2E-90 4.3E-95 845.7 41.1 491 115-613 4-495 (1061)
2 TIGR02813 omega_3_PfaA polyket 100.0 2E-82 4.3E-87 817.6 46.8 470 113-585 5-507 (2582)
3 PRK08722 3-oxoacyl-(acyl carri 100.0 3.5E-70 7.5E-75 613.6 40.4 399 113-538 2-413 (414)
4 KOG1394|consensus 100.0 3.7E-71 7.9E-76 564.0 23.9 401 114-539 23-439 (440)
5 PLN02787 3-oxoacyl-[acyl-carri 100.0 1.9E-69 4.1E-74 617.2 37.7 398 113-539 127-539 (540)
6 PRK06333 3-oxoacyl-(acyl carri 100.0 1.3E-68 2.9E-73 607.5 39.0 401 113-540 2-423 (424)
7 PRK07910 3-oxoacyl-(acyl carri 100.0 1.4E-67 2.9E-72 592.7 40.9 394 114-539 11-418 (418)
8 PLN02836 3-oxoacyl-[acyl-carri 100.0 8.7E-68 1.9E-72 599.4 38.2 416 112-540 3-437 (437)
9 cd00832 CLF Chain-length facto 100.0 2.6E-67 5.6E-72 588.7 38.6 387 115-536 1-399 (399)
10 smart00825 PKS_KS Beta-ketoacy 100.0 5.9E-67 1.3E-71 595.4 38.6 422 117-539 1-424 (424)
11 KOG1202|consensus 100.0 1.7E-67 3.6E-72 592.6 28.1 450 113-591 9-461 (2376)
12 PRK07314 3-oxoacyl-(acyl carri 100.0 3.3E-66 7.1E-71 586.2 38.6 396 115-539 2-410 (411)
13 PRK07967 3-oxoacyl-(acyl carri 100.0 5E-66 1.1E-70 576.6 39.0 388 115-539 2-404 (406)
14 cd00833 PKS polyketide synthas 100.0 1.4E-65 3E-70 584.1 39.5 420 115-536 1-421 (421)
15 PRK08439 3-oxoacyl-(acyl carri 100.0 1.8E-65 3.9E-70 576.1 39.8 392 115-539 2-406 (406)
16 PRK09116 3-oxoacyl-(acyl carri 100.0 1.5E-65 3.3E-70 574.4 37.2 389 115-537 2-405 (405)
17 TIGR03150 fabF beta-ketoacyl-a 100.0 1.7E-64 3.7E-69 572.2 39.0 394 115-537 1-407 (407)
18 COG0304 FabB 3-oxoacyl-(acyl-c 100.0 2.5E-64 5.5E-69 553.5 36.0 394 114-539 2-411 (412)
19 PTZ00050 3-oxoacyl-acyl carrie 100.0 1.7E-63 3.6E-68 562.8 37.1 401 124-538 1-420 (421)
20 cd00828 elong_cond_enzymes "el 100.0 2.9E-63 6.2E-68 561.9 36.4 388 115-536 1-407 (407)
21 cd00834 KAS_I_II Beta-ketoacyl 100.0 6.6E-63 1.4E-67 559.4 37.9 393 115-536 1-406 (406)
22 PRK07103 polyketide beta-ketoa 100.0 3.4E-62 7.4E-67 550.2 38.3 394 115-538 2-410 (410)
23 PRK05952 3-oxoacyl-(acyl carri 100.0 7.5E-62 1.6E-66 538.0 34.9 368 115-537 2-380 (381)
24 PRK06501 3-oxoacyl-(acyl carri 100.0 2.2E-59 4.8E-64 528.9 38.2 393 113-540 9-424 (425)
25 PRK14691 3-oxoacyl-(acyl carri 100.0 5.3E-59 1.2E-63 506.8 31.9 325 199-539 1-340 (342)
26 PRK06519 3-oxoacyl-(acyl carri 100.0 1.1E-57 2.5E-62 506.2 37.6 369 112-538 3-396 (398)
27 PRK09185 3-oxoacyl-(acyl carri 100.0 9.3E-56 2E-60 495.1 37.8 378 115-539 2-391 (392)
28 KOG1680|consensus 100.0 7.9E-42 1.7E-46 341.5 14.3 240 557-810 46-286 (290)
29 cd00825 decarbox_cond_enzymes 100.0 3.3E-39 7.2E-44 355.7 33.3 319 202-536 11-332 (332)
30 PLN02888 enoyl-CoA hydratase 100.0 4.2E-40 9.1E-45 348.4 16.3 235 581-815 30-265 (265)
31 PF00109 ketoacyl-synt: Beta-k 100.0 1.3E-39 2.8E-44 345.0 17.5 246 115-362 2-254 (254)
32 PLN03214 probable enoyl-CoA hy 100.0 1.5E-39 3.2E-44 346.1 14.1 233 582-815 32-272 (278)
33 PRK05862 enoyl-CoA hydratase; 100.0 1.7E-39 3.6E-44 343.2 14.4 227 581-808 24-251 (257)
34 PRK08259 enoyl-CoA hydratase; 100.0 3.7E-39 8.1E-44 339.2 16.2 228 581-810 23-251 (254)
35 PRK05980 enoyl-CoA hydratase; 100.0 3.7E-39 8.1E-44 341.4 15.1 226 582-808 24-257 (260)
36 PRK08252 enoyl-CoA hydratase; 100.0 4.4E-39 9.5E-44 339.2 15.5 225 581-807 23-247 (254)
37 PLN02600 enoyl-CoA hydratase 100.0 4.1E-39 8.8E-44 338.6 15.2 227 581-808 15-245 (251)
38 PRK09674 enoyl-CoA hydratase-i 100.0 4.5E-39 9.7E-44 339.3 15.4 226 582-808 23-249 (255)
39 PRK06563 enoyl-CoA hydratase; 100.0 4.3E-39 9.4E-44 339.7 15.2 227 581-808 19-249 (255)
40 PRK06147 3-oxoacyl-(acyl carri 100.0 3.8E-37 8.2E-42 338.7 30.8 336 115-538 3-342 (348)
41 PRK08150 enoyl-CoA hydratase; 100.0 5.4E-39 1.2E-43 338.2 15.0 225 581-808 22-249 (255)
42 PRK06143 enoyl-CoA hydratase; 100.0 5.1E-39 1.1E-43 338.6 14.8 225 581-807 27-255 (256)
43 PRK07799 enoyl-CoA hydratase; 100.0 6.7E-39 1.4E-43 339.8 15.7 226 582-808 26-257 (263)
44 TIGR02280 PaaB1 phenylacetate 100.0 5.7E-39 1.2E-43 339.0 15.1 226 581-808 19-250 (256)
45 PRK06494 enoyl-CoA hydratase; 100.0 7.8E-39 1.7E-43 338.3 15.8 227 581-808 24-253 (259)
46 PRK09076 enoyl-CoA hydratase; 100.0 5.6E-39 1.2E-43 339.2 14.4 226 582-808 23-252 (258)
47 PRK08138 enoyl-CoA hydratase; 100.0 8E-39 1.7E-43 338.6 14.9 226 582-808 29-255 (261)
48 PRK06142 enoyl-CoA hydratase; 100.0 5.7E-39 1.2E-43 342.0 13.8 227 581-808 26-267 (272)
49 PRK09120 p-hydroxycinnamoyl Co 100.0 1.1E-38 2.3E-43 339.4 15.9 227 581-808 28-264 (275)
50 PRK07658 enoyl-CoA hydratase; 100.0 1E-38 2.2E-43 337.6 15.2 226 582-808 22-251 (257)
51 PLN02664 enoyl-CoA hydratase/d 100.0 8.9E-39 1.9E-43 340.6 14.1 227 581-808 28-269 (275)
52 PRK07260 enoyl-CoA hydratase; 100.0 1.8E-38 3.8E-43 335.0 16.1 226 581-807 22-254 (255)
53 PRK09245 enoyl-CoA hydratase; 100.0 1.5E-38 3.2E-43 337.9 15.4 226 582-808 24-260 (266)
54 PRK08139 enoyl-CoA hydratase; 100.0 1.6E-38 3.5E-43 336.8 15.0 226 581-808 31-260 (266)
55 PRK06127 enoyl-CoA hydratase; 100.0 1.7E-38 3.7E-43 337.3 15.2 227 581-808 31-263 (269)
56 PRK07657 enoyl-CoA hydratase; 100.0 1.7E-38 3.6E-43 336.2 14.9 227 581-808 24-254 (260)
57 PRK08140 enoyl-CoA hydratase; 100.0 1.6E-38 3.5E-43 336.9 14.8 226 581-808 24-256 (262)
58 PRK06023 enoyl-CoA hydratase; 100.0 1.6E-38 3.5E-43 334.4 14.4 224 581-806 26-251 (251)
59 PRK08258 enoyl-CoA hydratase; 100.0 2.3E-38 5E-43 337.8 15.6 226 582-808 38-271 (277)
60 PRK05995 enoyl-CoA hydratase; 100.0 3.2E-38 6.9E-43 334.6 16.3 226 581-808 24-256 (262)
61 PRK05674 gamma-carboxygeranoyl 100.0 2.2E-38 4.8E-43 335.5 14.9 225 582-808 27-258 (265)
62 PRK03580 carnitinyl-CoA dehydr 100.0 3.3E-38 7.1E-43 334.0 15.3 226 582-808 23-255 (261)
63 TIGR01929 menB naphthoate synt 100.0 2.2E-38 4.7E-43 334.7 14.0 225 582-808 24-253 (259)
64 PRK07511 enoyl-CoA hydratase; 100.0 3.1E-38 6.7E-43 334.4 15.0 226 582-808 24-255 (260)
65 PRK05809 3-hydroxybutyryl-CoA 100.0 3.7E-38 8E-43 333.8 15.4 227 581-808 24-254 (260)
66 PRK07468 enoyl-CoA hydratase; 100.0 4.5E-38 9.7E-43 333.1 15.9 226 581-808 25-256 (262)
67 PRK05981 enoyl-CoA hydratase; 100.0 2.6E-38 5.6E-43 336.1 13.7 227 581-808 24-260 (266)
68 PRK06688 enoyl-CoA hydratase; 100.0 3.9E-38 8.5E-43 333.8 14.9 227 581-808 25-253 (259)
69 PRK05870 enoyl-CoA hydratase; 100.0 4.6E-38 1E-42 330.5 14.0 223 581-806 23-249 (249)
70 PRK06210 enoyl-CoA hydratase; 100.0 6.2E-38 1.4E-42 334.3 15.2 227 581-808 26-266 (272)
71 PRK07396 dihydroxynaphthoic ac 100.0 5.3E-38 1.2E-42 334.1 14.4 226 581-808 33-263 (273)
72 PRK07938 enoyl-CoA hydratase; 100.0 5.7E-38 1.2E-42 329.3 14.1 222 582-807 22-247 (249)
73 PRK05864 enoyl-CoA hydratase; 100.0 9.9E-38 2.2E-42 332.8 15.6 227 581-808 30-269 (276)
74 TIGR03210 badI 2-ketocyclohexa 100.0 8.1E-38 1.7E-42 329.8 14.2 226 581-808 22-250 (256)
75 PRK07327 enoyl-CoA hydratase; 100.0 9E-38 1.9E-42 331.7 14.5 222 582-808 33-262 (268)
76 PRK07659 enoyl-CoA hydratase; 100.0 1.1E-37 2.4E-42 329.7 15.0 225 581-808 26-254 (260)
77 PRK07110 polyketide biosynthes 100.0 1.1E-37 2.5E-42 327.2 14.7 222 582-804 26-247 (249)
78 PF00378 ECH: Enoyl-CoA hydrat 100.0 4.4E-38 9.5E-43 330.9 11.4 225 581-806 18-245 (245)
79 TIGR03189 dienoyl_CoA_hyt cycl 100.0 1.8E-37 4E-42 325.6 14.6 222 582-808 21-245 (251)
80 PRK06144 enoyl-CoA hydratase; 100.0 1.2E-37 2.7E-42 329.5 13.2 223 581-808 28-256 (262)
81 PRK06495 enoyl-CoA hydratase; 100.0 1.8E-37 3.8E-42 327.6 14.4 223 582-808 24-251 (257)
82 PRK08260 enoyl-CoA hydratase; 100.0 2E-37 4.4E-42 333.5 14.8 227 581-808 24-272 (296)
83 PLN02921 naphthoate synthase 100.0 2.3E-37 5E-42 334.2 14.5 226 581-808 87-317 (327)
84 PRK06072 enoyl-CoA hydratase; 100.0 4.6E-37 9.9E-42 322.5 14.5 223 581-808 20-242 (248)
85 PRK11423 methylmalonyl-CoA dec 100.0 4.2E-37 9.2E-42 325.0 14.3 226 581-808 24-255 (261)
86 PRK07509 enoyl-CoA hydratase; 100.0 5.6E-37 1.2E-41 325.3 14.4 224 581-807 23-256 (262)
87 PRK06190 enoyl-CoA hydratase; 100.0 6.7E-37 1.5E-41 322.1 14.5 227 581-807 24-253 (258)
88 COG1024 CaiD Enoyl-CoA hydrata 100.0 1.2E-36 2.6E-41 321.7 14.3 223 581-805 25-252 (257)
89 PRK08321 naphthoate synthase; 100.0 1.2E-36 2.5E-41 327.7 14.2 226 581-808 45-292 (302)
90 PRK07854 enoyl-CoA hydratase; 100.0 1.6E-36 3.4E-41 317.2 13.3 218 581-808 20-237 (243)
91 PRK07827 enoyl-CoA hydratase; 100.0 2.4E-36 5.2E-41 319.8 14.0 223 582-808 27-255 (260)
92 PRK12478 enoyl-CoA hydratase; 100.0 3.5E-36 7.5E-41 323.1 14.6 223 581-808 25-275 (298)
93 PRK05617 3-hydroxyisobutyryl-C 100.0 4.2E-36 9E-41 328.0 13.7 224 581-806 23-317 (342)
94 PRK07112 polyketide biosynthes 100.0 9.5E-36 2.1E-40 313.8 14.9 219 582-807 25-248 (255)
95 KOG0016|consensus 100.0 1.1E-34 2.4E-39 287.7 15.2 229 580-809 27-265 (266)
96 PRK08788 enoyl-CoA hydratase; 100.0 5.3E-35 1.1E-39 310.2 13.7 227 582-809 37-279 (287)
97 PRK05869 enoyl-CoA hydratase; 100.0 2.3E-35 5E-40 303.7 9.8 190 582-771 28-220 (222)
98 PLN02874 3-hydroxyisobutyryl-C 100.0 2.9E-35 6.4E-40 325.0 11.1 226 581-807 31-331 (379)
99 TIGR03222 benzo_boxC benzoyl-C 100.0 1.4E-34 3.1E-39 329.0 11.2 225 582-808 292-538 (546)
100 PRK08184 benzoyl-CoA-dihydrodi 100.0 2.2E-34 4.7E-39 328.9 12.3 247 558-808 272-542 (550)
101 PRK08290 enoyl-CoA hydratase; 100.0 6.2E-34 1.4E-38 304.4 13.2 212 582-795 25-262 (288)
102 KOG1679|consensus 100.0 8.7E-35 1.9E-39 277.2 4.9 229 579-808 49-285 (291)
103 PRK08272 enoyl-CoA hydratase; 100.0 9.3E-34 2E-38 306.0 13.2 190 581-773 30-247 (302)
104 PLN02157 3-hydroxyisobutyryl-C 100.0 7.4E-34 1.6E-38 312.7 12.4 220 581-804 57-283 (401)
105 TIGR03200 dearomat_oah 6-oxocy 100.0 2.3E-33 5E-38 298.7 14.3 223 530-769 14-257 (360)
106 PRK06213 enoyl-CoA hydratase; 100.0 6.5E-34 1.4E-38 295.4 9.4 202 581-784 22-226 (229)
107 PRK11730 fadB multifunctional 100.0 3.6E-33 7.8E-38 332.5 14.6 229 582-811 28-301 (715)
108 KOG1681|consensus 100.0 2.3E-33 5.1E-38 270.2 4.9 240 555-808 29-285 (292)
109 PRK11154 fadJ multifunctional 100.0 4.3E-32 9.3E-37 323.4 14.1 230 581-811 27-299 (708)
110 TIGR02440 FadJ fatty oxidation 100.0 9.2E-32 2E-36 319.7 13.7 230 581-811 22-294 (699)
111 COG0447 MenB Dihydroxynaphthoi 100.0 1.4E-31 3.1E-36 255.9 8.3 224 582-807 40-271 (282)
112 PLN02988 3-hydroxyisobutyryl-C 100.0 2.8E-31 6E-36 291.7 11.4 220 582-805 30-256 (381)
113 PLN02267 enoyl-CoA hydratase/i 100.0 3.8E-31 8.2E-36 275.5 8.6 189 583-771 21-220 (239)
114 PLN02851 3-hydroxyisobutyryl-C 100.0 2.2E-30 4.8E-35 284.8 14.3 225 580-806 61-362 (407)
115 cd00327 cond_enzymes Condensin 100.0 1.4E-28 3.1E-33 260.4 26.7 247 202-536 7-254 (254)
116 TIGR02437 FadB fatty oxidation 100.0 4.3E-30 9.3E-35 305.3 13.3 227 582-809 28-299 (714)
117 KOG1682|consensus 100.0 1.9E-29 4.1E-34 238.8 9.0 226 580-807 51-280 (287)
118 TIGR02441 fa_ox_alpha_mit fatt 100.0 4.7E-29 1E-33 296.9 13.3 229 582-811 35-326 (737)
119 TIGR03222 benzo_boxC benzoyl-C 99.9 1.9E-28 4E-33 279.1 8.3 178 580-757 40-231 (546)
120 cd06558 crotonase-like Crotona 99.9 3.3E-28 7E-33 247.1 6.5 171 582-752 20-195 (195)
121 PRK08184 benzoyl-CoA-dihydrodi 99.9 6.2E-28 1.3E-32 276.0 7.9 178 581-758 45-236 (550)
122 PRK05656 acetyl-CoA acetyltran 99.9 7.6E-24 1.6E-28 236.9 24.3 265 203-538 27-392 (393)
123 PRK06064 acetyl-CoA acetyltran 99.9 1.6E-23 3.5E-28 234.9 23.3 285 202-538 22-387 (389)
124 cd00751 thiolase Thiolase are 99.9 2.3E-23 5E-28 233.3 22.2 265 202-537 22-385 (386)
125 PRK06633 acetyl-CoA acetyltran 99.9 4.5E-23 9.7E-28 228.9 22.2 263 203-538 28-391 (392)
126 PRK07108 acetyl-CoA acetyltran 99.9 5.9E-23 1.3E-27 229.0 23.2 265 202-538 27-391 (392)
127 PRK12578 acetyl-CoA acetyltran 99.9 1.3E-22 2.8E-27 227.2 24.0 250 202-479 21-353 (385)
128 PF02801 Ketoacyl-synt_C: Beta 99.9 2.1E-24 4.5E-29 200.4 6.6 118 370-488 1-119 (119)
129 PRK09051 beta-ketothiolase; Pr 99.9 2.7E-22 5.9E-27 223.8 23.6 266 203-538 28-393 (394)
130 PRK08242 acetyl-CoA acetyltran 99.9 3.3E-22 7.1E-27 222.5 23.8 264 203-538 29-401 (402)
131 PRK09052 acetyl-CoA acetyltran 99.9 6.4E-22 1.4E-26 221.0 24.1 262 203-538 32-398 (399)
132 PRK13359 beta-ketoadipyl CoA t 99.9 4.2E-22 9.1E-27 222.0 21.5 264 203-538 27-399 (400)
133 PRK07661 acetyl-CoA acetyltran 99.9 1.2E-21 2.5E-26 218.6 24.1 264 203-538 28-390 (391)
134 TIGR01930 AcCoA-C-Actrans acet 99.9 4.4E-22 9.6E-27 222.5 20.7 265 202-537 21-386 (386)
135 KOG1684|consensus 99.9 3.2E-23 6.9E-28 214.0 9.9 233 560-807 50-360 (401)
136 PLN02287 3-ketoacyl-CoA thiola 99.9 2.9E-21 6.2E-26 217.9 25.1 271 203-541 72-437 (452)
137 TIGR02430 pcaF beta-ketoadipyl 99.9 1.2E-21 2.5E-26 218.5 21.6 264 203-538 26-399 (400)
138 PLN02644 acetyl-CoA C-acetyltr 99.9 4.6E-21 1E-25 214.6 25.2 263 203-538 26-392 (394)
139 PRK07516 acetyl-CoA acetyltran 99.9 4E-21 8.6E-26 215.4 24.6 284 203-538 23-387 (389)
140 PRK05790 putative acyltransfer 99.9 1.8E-21 4E-26 218.6 21.9 263 203-538 27-392 (393)
141 PRK08131 acetyl-CoA acetyltran 99.9 2.2E-21 4.8E-26 216.6 22.0 242 203-478 27-375 (401)
142 PRK09050 beta-ketoadipyl CoA t 99.9 2.8E-21 6.1E-26 215.7 22.4 263 203-538 27-400 (401)
143 PRK06954 acetyl-CoA acetyltran 99.9 3E-21 6.5E-26 216.1 22.4 265 203-538 32-396 (397)
144 PRK07851 acetyl-CoA acetyltran 99.9 4.3E-21 9.3E-26 215.3 22.8 267 203-539 28-405 (406)
145 PRK06205 acetyl-CoA acetyltran 99.9 1.1E-20 2.4E-25 212.2 25.6 266 203-538 27-402 (404)
146 PRK08256 lipid-transfer protei 99.9 4.7E-21 1E-25 215.0 22.1 278 202-537 22-389 (391)
147 PRK06445 acetyl-CoA acetyltran 99.9 4.2E-21 9E-26 215.1 21.3 268 203-538 33-393 (394)
148 cd00829 SCP-x_thiolase Thiolas 99.9 6.3E-21 1.4E-25 213.7 22.0 250 202-479 16-347 (375)
149 PRK08235 acetyl-CoA acetyltran 99.9 3.8E-21 8.2E-26 214.8 18.7 263 203-538 27-392 (393)
150 TIGR02445 fadA fatty oxidation 99.9 1.2E-20 2.7E-25 209.9 21.5 267 203-538 26-384 (385)
151 PRK08313 acetyl-CoA acetyltran 99.9 2.7E-20 5.9E-25 207.8 24.1 252 203-479 25-352 (386)
152 PRK08947 fadA 3-ketoacyl-CoA t 99.9 1.9E-20 4.1E-25 208.8 22.5 269 203-538 28-386 (387)
153 PTZ00455 3-ketoacyl-CoA thiola 99.9 4.7E-20 1E-24 207.7 25.7 283 203-537 49-436 (438)
154 PRK08963 fadI 3-ketoacyl-CoA t 99.9 1.3E-20 2.8E-25 212.8 20.7 269 203-538 30-427 (428)
155 PRK06059 lipid-transfer protei 99.9 1.8E-20 3.8E-25 210.9 21.8 282 203-538 24-399 (399)
156 PRK06158 thiolase; Provisional 99.9 3.9E-20 8.5E-25 206.6 24.1 274 203-538 29-380 (384)
157 PRK06365 acetyl-CoA acetyltran 99.9 4.3E-20 9.3E-25 208.3 24.6 251 203-479 38-391 (430)
158 PRK07850 acetyl-CoA acetyltran 99.9 3.3E-20 7.2E-25 206.6 22.9 266 203-538 27-386 (387)
159 PRK06065 acetyl-CoA acetyltran 99.9 5.9E-20 1.3E-24 204.5 24.2 252 202-479 29-360 (392)
160 PRK06366 acetyl-CoA acetyltran 99.8 2.3E-20 5E-25 208.5 20.1 263 203-538 27-386 (388)
161 PRK06157 acetyl-CoA acetyltran 99.8 1.1E-19 2.5E-24 203.7 24.4 250 203-479 28-364 (398)
162 PRK06289 acetyl-CoA acetyltran 99.8 8.8E-20 1.9E-24 205.4 22.9 254 203-479 27-372 (403)
163 PRK07801 acetyl-CoA acetyltran 99.8 1E-19 2.2E-24 203.4 22.6 266 203-538 27-381 (382)
164 TIGR02446 FadI fatty oxidation 99.8 8.2E-20 1.8E-24 205.6 21.8 246 203-478 32-405 (430)
165 PRK08170 acetyl-CoA acetyltran 99.8 1.2E-19 2.6E-24 205.1 22.2 269 203-538 28-425 (426)
166 PRK06504 acetyl-CoA acetyltran 99.8 2.9E-19 6.2E-24 198.9 24.4 266 203-538 27-389 (390)
167 PRK08142 acetyl-CoA acetyltran 99.8 2.2E-19 4.9E-24 199.6 22.6 246 203-479 26-352 (388)
168 PRK06025 acetyl-CoA acetyltran 99.8 1.6E-19 3.4E-24 199.8 20.9 264 203-538 30-416 (417)
169 PRK06066 acetyl-CoA acetyltran 99.8 1.1E-18 2.4E-23 193.2 23.6 275 203-537 26-384 (385)
170 cd00826 nondecarbox_cond_enzym 99.8 7.6E-19 1.6E-23 196.5 20.7 251 202-478 23-364 (393)
171 PRK09268 acetyl-CoA acetyltran 99.8 1.2E-18 2.6E-23 196.2 20.3 275 203-538 32-427 (427)
172 PRK07515 3-oxoacyl-(acyl carri 99.8 9.8E-19 2.1E-23 195.4 17.8 224 201-471 94-342 (372)
173 PRK06690 acetyl-CoA acetyltran 99.8 8.2E-18 1.8E-22 184.7 24.2 260 203-538 26-359 (361)
174 KOG1390|consensus 99.8 2.3E-19 4.9E-24 182.2 9.8 239 202-478 30-371 (396)
175 PRK07204 3-oxoacyl-(acyl carri 99.7 5.9E-17 1.3E-21 178.3 21.0 246 202-537 52-328 (329)
176 KOG1406|consensus 99.7 2.6E-18 5.5E-23 169.9 8.8 248 205-478 32-367 (408)
177 COG0332 FabH 3-oxoacyl-[acyl-c 99.7 1.1E-16 2.3E-21 170.8 19.4 289 116-537 3-321 (323)
178 PRK07855 lipid-transfer protei 99.7 3E-16 6.6E-21 175.0 22.8 242 203-479 25-359 (386)
179 PRK08257 acetyl-CoA acetyltran 99.7 3.2E-16 6.9E-21 179.6 23.5 271 203-540 28-399 (498)
180 PRK07937 lipid-transfer protei 99.7 4.4E-16 9.6E-21 170.9 22.4 239 203-479 25-325 (352)
181 PRK09352 3-oxoacyl-(acyl carri 99.7 2.5E-16 5.3E-21 172.7 20.4 241 202-537 52-317 (319)
182 TIGR00747 fabH 3-oxoacyl-(acyl 99.7 9.7E-16 2.1E-20 167.9 19.6 242 202-537 51-317 (318)
183 PRK12879 3-oxoacyl-(acyl carri 99.7 5.1E-15 1.1E-19 162.7 22.3 247 202-538 53-324 (325)
184 cd00830 KAS_III Ketoacyl-acyl 99.6 1.9E-15 4E-20 165.8 16.1 214 202-473 50-293 (320)
185 PRK06816 3-oxoacyl-(acyl carri 99.6 9.8E-15 2.1E-19 163.2 22.2 240 202-472 63-346 (378)
186 PRK09258 3-oxoacyl-(acyl carri 99.6 4.6E-15 9.9E-20 164.0 18.7 260 202-537 61-337 (338)
187 KOG1389|consensus 99.6 9.8E-16 2.1E-20 155.1 10.3 237 205-479 64-398 (435)
188 cd07014 S49_SppA Signal peptid 99.6 2.2E-16 4.7E-21 157.4 4.0 144 588-744 22-175 (177)
189 KOG1391|consensus 99.6 1.2E-14 2.6E-19 143.6 15.9 244 202-479 28-371 (396)
190 CHL00203 fabH 3-oxoacyl-acyl-c 99.6 1E-13 2.2E-18 152.4 22.2 240 202-537 51-324 (326)
191 PLN02326 3-oxoacyl-[acyl-carri 99.6 1.8E-13 4E-18 153.1 22.8 242 202-537 96-378 (379)
192 TIGR00748 HMG_CoA_syn_Arc hydr 99.5 4.7E-13 1E-17 147.8 21.3 239 202-537 50-306 (345)
193 cd00827 init_cond_enzymes "ini 99.5 1.6E-13 3.5E-18 150.8 17.7 215 202-472 48-296 (324)
194 PRK06840 hypothetical protein; 99.5 3.8E-13 8.1E-18 148.7 20.6 243 202-539 53-336 (339)
195 cd07020 Clp_protease_NfeD_1 No 99.5 6.6E-15 1.4E-19 147.8 5.9 140 588-744 13-172 (187)
196 PRK04262 hypothetical protein; 99.5 3E-13 6.5E-18 149.7 19.3 239 202-537 51-307 (347)
197 PRK05963 3-oxoacyl-(acyl carri 99.5 2.8E-12 6.2E-17 141.0 21.1 242 202-537 52-325 (326)
198 COG0183 PaaJ Acetyl-CoA acetyl 99.5 1.3E-13 2.9E-18 153.9 9.8 97 205-318 25-126 (392)
199 KOG1392|consensus 99.4 1.3E-13 2.8E-18 138.2 6.5 274 204-541 68-465 (465)
200 PLN03172 chalcone synthase fam 99.4 4.4E-11 9.6E-16 133.5 23.8 275 190-539 90-387 (393)
201 cd00831 CHS_like Chalcone and 99.4 1.3E-11 2.8E-16 137.7 17.9 231 196-472 79-333 (361)
202 PLN03170 chalcone synthase; Pr 99.3 5.6E-11 1.2E-15 133.2 20.0 346 115-541 19-393 (401)
203 PLN03171 chalcone synthase-lik 99.3 3.4E-11 7.3E-16 135.1 16.2 270 191-538 97-394 (399)
204 cd07019 S49_SppA_1 Signal pept 99.3 1.9E-12 4.1E-17 132.6 5.2 142 588-742 21-207 (211)
205 PRK12880 3-oxoacyl-(acyl carri 99.3 5.3E-11 1.2E-15 131.6 16.3 243 202-539 60-339 (353)
206 PLN03169 chalcone synthase fam 99.3 1.3E-10 2.9E-15 130.1 19.5 227 200-471 104-354 (391)
207 TIGR02845 spore_V_AD stage V s 99.3 5E-11 1.1E-15 125.6 13.8 178 202-422 50-231 (327)
208 PLN03173 chalcone synthase; Pr 99.2 6.5E-10 1.4E-14 124.1 18.9 237 191-472 91-349 (391)
209 PLN03168 chalcone synthase; Pr 99.1 2.2E-09 4.8E-14 120.0 20.3 237 191-471 90-347 (389)
210 PRK08304 stage V sporulation p 99.1 8.2E-10 1.8E-14 116.8 14.4 178 202-422 56-237 (337)
211 cd00394 Clp_protease_like Case 99.1 5.8E-11 1.3E-15 116.6 5.4 136 584-735 7-161 (161)
212 PLN02854 3-ketoacyl-CoA syntha 99.1 1.2E-08 2.6E-13 116.0 23.9 327 114-540 111-495 (521)
213 TIGR01835 HMG-CoA-S_prok 3-hyd 99.1 4.3E-09 9.2E-14 117.8 18.7 214 203-472 50-286 (379)
214 PLN02377 3-ketoacyl-CoA syntha 99.0 3.2E-08 6.9E-13 112.5 24.1 189 114-359 95-295 (502)
215 PLN02577 hydroxymethylglutaryl 99.0 1E-08 2.2E-13 115.5 19.8 176 202-426 53-254 (459)
216 cd07016 S14_ClpP_1 Caseinolyti 99.0 1.7E-10 3.8E-15 113.0 4.9 128 589-735 16-160 (160)
217 TIGR00705 SppA_67K signal pept 99.0 1.4E-10 3E-15 135.6 4.2 151 591-761 332-531 (584)
218 cd07022 S49_Sppa_36K_type Sign 99.0 3.8E-10 8.3E-15 116.0 6.1 142 585-742 22-210 (214)
219 COG3425 PksG 3-hydroxy-3-methy 99.0 3.7E-08 7.9E-13 106.0 19.4 214 202-473 51-282 (377)
220 cd07023 S49_Sppa_N_C Signal pe 98.9 1.7E-09 3.7E-14 110.8 6.1 141 587-741 16-203 (208)
221 PF02803 Thiolase_C: Thiolase, 98.9 2E-09 4.4E-14 99.2 5.4 120 368-538 2-123 (123)
222 PRK12404 stage V sporulation p 98.9 3.7E-08 8E-13 103.7 14.9 178 202-422 54-235 (334)
223 TIGR01833 HMG-CoA-S_euk 3-hydr 98.9 2.2E-07 4.7E-12 104.8 21.7 176 202-426 50-256 (454)
224 TIGR00706 SppA_dom signal pept 98.8 3.2E-09 7E-14 108.5 5.6 141 590-747 15-204 (207)
225 PF00108 Thiolase_N: Thiolase, 98.8 7.7E-09 1.7E-13 109.7 8.3 94 202-317 26-121 (264)
226 cd07018 S49_SppA_67K_type Sign 98.7 1.4E-08 3E-13 105.0 6.6 147 583-744 24-219 (222)
227 PLN02932 3-ketoacyl-CoA syntha 98.7 2.2E-07 4.7E-12 105.2 14.2 198 114-360 65-272 (478)
228 PLN02192 3-ketoacyl-CoA syntha 98.5 5.8E-07 1.2E-11 102.2 11.6 189 114-359 99-299 (511)
229 cd07021 Clp_protease_NfeD_like 98.5 1.3E-07 2.7E-12 93.8 5.3 133 589-742 14-176 (178)
230 PF13723 Ketoacyl-synt_2: Beta 98.4 7.9E-07 1.7E-11 90.4 9.6 117 191-316 23-145 (218)
231 PRK06060 acyl-CoA synthetase; 98.4 1.9E-07 4.1E-12 113.9 4.3 77 24-102 539-615 (705)
232 PF08392 FAE1_CUT1_RppA: FAE1/ 98.1 1.5E-05 3.2E-10 83.6 11.4 195 114-361 6-208 (290)
233 PLN00415 3-ketoacyl-CoA syntha 98.1 1.9E-05 4.2E-10 88.5 12.3 120 202-360 133-258 (466)
234 COG3424 BcsA Predicted naringe 98.0 2.6E-05 5.7E-10 80.6 10.6 186 199-427 73-285 (356)
235 PF00550 PP-binding: Phosphopa 98.0 3.4E-06 7.5E-11 69.4 2.3 64 34-100 2-65 (67)
236 cd07013 S14_ClpP Caseinolytic 97.9 1.3E-05 2.8E-10 78.5 5.5 133 586-735 10-162 (162)
237 KOG1683|consensus 97.8 6.1E-07 1.3E-11 95.3 -5.5 227 581-811 75-320 (380)
238 PF08545 ACP_syn_III: 3-Oxoacy 97.8 1.1E-05 2.3E-10 69.2 3.0 64 278-359 1-64 (80)
239 cd07015 Clp_protease_NfeD Nodu 97.8 2.4E-05 5.3E-10 76.8 5.7 135 591-742 16-170 (172)
240 PRK10949 protease 4; Provision 97.7 6.3E-05 1.4E-09 88.4 7.4 142 592-747 351-538 (618)
241 PRK00277 clpP ATP-dependent Cl 97.7 7.3E-05 1.6E-09 75.8 6.8 134 582-738 37-196 (200)
242 PF07451 SpoVAD: Stage V sporu 97.6 0.0016 3.4E-08 68.2 14.8 174 202-420 51-230 (329)
243 PF00195 Chal_sti_synt_N: Chal 97.6 0.00017 3.6E-09 73.7 7.5 124 196-358 94-224 (226)
244 PRK12319 acetyl-CoA carboxylas 97.5 0.00025 5.4E-09 74.1 8.1 82 647-738 133-214 (256)
245 PRK00982 acpP acyl carrier pro 97.5 3.4E-05 7.3E-10 65.7 1.3 70 30-101 3-72 (78)
246 CHL00198 accA acetyl-CoA carbo 97.4 0.00045 9.8E-09 73.8 8.0 80 648-737 190-269 (322)
247 PLN03230 acetyl-coenzyme A car 97.4 0.00054 1.2E-08 75.0 8.2 81 647-737 256-336 (431)
248 cd07017 S14_ClpP_2 Caseinolyti 97.3 0.00012 2.6E-09 72.4 2.5 132 586-735 19-171 (171)
249 PRK12553 ATP-dependent Clp pro 97.3 0.00028 6.1E-09 71.9 5.0 135 584-738 43-202 (207)
250 PLN03229 acetyl-coenzyme A car 97.2 0.00078 1.7E-08 78.2 8.4 110 647-766 277-399 (762)
251 TIGR00513 accA acetyl-CoA carb 97.2 0.0012 2.5E-08 70.8 8.2 81 647-737 186-266 (316)
252 COG0616 SppA Periplasmic serin 97.1 0.00045 9.7E-09 75.2 4.5 134 591-742 83-266 (317)
253 PRK14512 ATP-dependent Clp pro 97.0 0.00081 1.8E-08 67.9 5.4 93 649-742 80-193 (197)
254 PRK05724 acetyl-CoA carboxylas 97.0 0.0021 4.5E-08 68.9 7.9 82 646-737 185-266 (319)
255 smart00823 PKS_PP Phosphopante 96.8 0.00099 2.2E-08 56.7 3.5 77 22-100 4-80 (86)
256 PF00574 CLP_protease: Clp pro 96.8 0.00033 7.3E-09 70.1 0.4 135 584-737 24-180 (182)
257 CHL00028 clpP ATP-dependent Cl 96.8 0.0016 3.5E-08 65.8 5.0 140 582-739 36-197 (200)
258 TIGR00493 clpP ATP-dependent C 96.7 0.0022 4.8E-08 64.5 5.5 89 649-737 83-190 (191)
259 PF01154 HMG_CoA_synt_N: Hydro 96.6 0.0054 1.2E-07 59.8 7.1 90 203-314 54-149 (174)
260 CHL00124 acpP acyl carrier pro 96.5 0.0011 2.3E-08 57.0 1.6 69 31-101 6-74 (82)
261 PRK05654 acetyl-CoA carboxylas 96.5 0.0063 1.4E-07 65.0 7.4 91 649-756 193-284 (292)
262 PF01343 Peptidase_S49: Peptid 96.4 0.0035 7.7E-08 60.9 4.5 99 649-748 5-150 (154)
263 PRK11778 putative inner membra 96.3 0.0042 9E-08 67.2 4.4 98 649-746 153-294 (330)
264 TIGR03133 malonate_beta malona 96.2 0.0096 2.1E-07 62.8 6.4 87 651-748 137-229 (274)
265 CHL00174 accD acetyl-CoA carbo 96.1 0.015 3.1E-07 61.8 7.5 87 649-752 206-293 (296)
266 PRK14514 ATP-dependent Clp pro 96.0 0.0091 2E-07 61.0 5.4 87 649-737 111-218 (221)
267 PRK14513 ATP-dependent Clp pro 96.0 0.011 2.5E-07 59.5 5.9 89 649-739 84-193 (201)
268 TIGR00705 SppA_67K signal pept 95.9 0.027 5.8E-07 66.6 9.5 86 587-685 75-160 (584)
269 PRK07639 acyl carrier protein; 95.9 0.01 2.2E-07 51.4 4.4 57 31-88 6-62 (86)
270 PRK05883 acyl carrier protein; 95.9 0.0053 1.2E-07 53.8 2.6 78 18-101 6-83 (91)
271 PRK12551 ATP-dependent Clp pro 95.9 0.013 2.9E-07 59.0 5.5 89 649-738 82-190 (196)
272 TIGR00515 accD acetyl-CoA carb 95.8 0.014 3.1E-07 62.1 5.9 88 649-753 192-280 (285)
273 TIGR00517 acyl_carrier acyl ca 95.8 0.0045 9.7E-08 52.4 1.6 67 31-99 4-70 (77)
274 COG0825 AccA Acetyl-CoA carbox 95.8 0.029 6.3E-07 58.3 7.5 82 646-737 184-265 (317)
275 PRK12449 acyl carrier protein; 95.6 0.0072 1.6E-07 51.6 2.3 68 32-101 7-74 (80)
276 PRK07081 acyl carrier protein; 95.5 0.006 1.3E-07 52.5 1.5 65 32-98 2-69 (83)
277 PRK09184 acyl carrier protein; 95.5 0.0091 2E-07 52.0 2.5 70 31-101 7-82 (89)
278 PF01972 SDH_sah: Serine dehyd 95.4 0.024 5.1E-07 58.9 5.5 50 647-696 115-164 (285)
279 PF08541 ACP_syn_III_C: 3-Oxoa 95.4 0.045 9.7E-07 47.8 6.5 89 403-537 1-89 (90)
280 PRK05350 acyl carrier protein; 95.3 0.0091 2E-07 51.3 1.9 67 31-99 7-73 (82)
281 TIGR03443 alpha_am_amid L-amin 94.8 0.015 3.2E-07 76.8 2.5 70 29-101 847-916 (1389)
282 TIGR03134 malonate_gamma malon 94.7 0.033 7.1E-07 57.8 4.3 83 649-740 106-191 (238)
283 COG0236 AcpP Acyl carrier prot 94.6 0.022 4.8E-07 48.6 2.2 66 29-96 4-69 (80)
284 PRK07189 malonate decarboxylas 94.4 0.052 1.1E-06 58.0 4.9 36 651-686 146-183 (301)
285 PRK07117 acyl carrier protein; 94.3 0.047 1E-06 46.4 3.7 58 30-89 5-62 (79)
286 PRK10949 protease 4; Provision 94.1 0.16 3.4E-06 60.4 8.6 86 587-685 94-179 (618)
287 PRK08172 putative acyl carrier 93.9 0.051 1.1E-06 46.6 3.1 58 31-90 5-62 (82)
288 COG0740 ClpP Protease subunit 93.9 0.094 2E-06 52.4 5.3 90 649-739 84-193 (200)
289 PF13766 ECH_C: 2-enoyl-CoA Hy 93.7 0.23 5E-06 45.8 7.1 64 743-807 31-94 (118)
290 PRK12552 ATP-dependent Clp pro 93.3 0.12 2.6E-06 52.9 5.1 88 649-738 106-214 (222)
291 PF01039 Carboxyl_trans: Carbo 93.0 0.15 3.2E-06 59.4 5.9 68 650-739 131-206 (493)
292 PRK06508 acyl carrier protein; 92.6 0.12 2.6E-06 45.4 3.4 55 32-88 5-59 (93)
293 PRK05828 acyl carrier protein; 92.3 0.16 3.6E-06 43.6 3.8 67 23-95 2-68 (84)
294 PRK10252 entF enterobactin syn 91.6 0.094 2E-06 68.8 2.4 67 31-102 979-1045(1296)
295 TIGR01117 mmdA methylmalonyl-C 90.9 0.42 9.1E-06 55.6 6.5 100 648-753 386-496 (512)
296 TIGR01117 mmdA methylmalonyl-C 90.6 0.39 8.4E-06 55.9 5.8 81 650-752 154-243 (512)
297 PLN02820 3-methylcrotonyl-CoA 90.2 0.52 1.1E-05 55.3 6.4 82 649-752 204-294 (569)
298 PTZ00171 acyl carrier protein; 89.5 0.42 9E-06 45.8 4.1 57 31-89 71-127 (148)
299 COG1030 NfeD Membrane-bound se 89.2 0.45 9.8E-06 52.9 4.6 95 643-737 78-187 (436)
300 PRK12467 peptide synthase; Pro 88.1 0.58 1.2E-05 68.1 5.8 66 31-101 1031-1096(3956)
301 KOG1748|consensus 86.9 0.41 8.9E-06 44.1 2.1 62 22-89 49-110 (131)
302 COG3433 Aryl carrier domain [S 86.6 0.37 8.1E-06 39.3 1.4 45 34-81 2-46 (74)
303 PRK12316 peptide synthase; Pro 86.4 0.65 1.4E-05 69.1 4.9 66 31-101 2517-2582(5163)
304 COG0777 AccD Acetyl-CoA carbox 86.4 1.4 3E-05 45.8 5.8 92 649-757 194-286 (294)
305 PRK12467 peptide synthase; Pro 85.4 0.46 9.9E-06 69.1 2.5 67 31-102 3606-3672(3956)
306 PRK05691 peptide synthase; Val 84.4 0.77 1.7E-05 67.5 4.0 66 31-101 1639-1704(4334)
307 PRK05087 D-alanine--poly(phosp 83.8 1.2 2.6E-05 37.8 3.4 56 31-88 3-58 (78)
308 PRK05691 peptide synthase; Val 81.3 0.85 1.8E-05 67.1 2.5 68 30-102 4241-4308(4334)
309 TIGR01688 dltC D-alanine--poly 80.7 1 2.2E-05 37.6 1.7 53 35-89 4-56 (73)
310 PRK12316 peptide synthase; Pro 80.7 0.88 1.9E-05 67.8 2.4 67 31-102 5073-5139(5163)
311 PRK12578 acetyl-CoA acetyltran 79.7 6 0.00013 44.6 8.2 97 372-481 4-101 (385)
312 PLN02932 3-ketoacyl-CoA syntha 79.4 7.9 0.00017 44.6 9.0 76 395-479 152-227 (478)
313 PLN02988 3-hydroxyisobutyryl-C 79.2 6.7 0.00015 44.0 8.2 63 743-805 264-328 (381)
314 PRK06158 thiolase; Provisional 78.5 7.7 0.00017 43.7 8.5 94 371-480 10-103 (384)
315 PLN02157 3-hydroxyisobutyryl-C 78.4 8.2 0.00018 43.5 8.6 63 743-805 292-356 (401)
316 PRK06157 acetyl-CoA acetyltran 78.0 7 0.00015 44.2 8.1 98 371-481 9-107 (398)
317 PRK06059 lipid-transfer protei 77.8 11 0.00023 42.8 9.5 96 371-480 6-103 (399)
318 PRK05790 putative acyltransfer 77.7 9.5 0.00021 43.1 9.0 101 371-481 4-107 (393)
319 PRK06065 acetyl-CoA acetyltran 77.4 8.6 0.00019 43.4 8.5 98 371-480 11-109 (392)
320 PRK08170 acetyl-CoA acetyltran 77.3 10 0.00023 43.3 9.2 101 371-481 5-108 (426)
321 PLN02644 acetyl-CoA C-acetyltr 76.2 12 0.00025 42.4 9.1 101 371-481 3-106 (394)
322 PF08392 FAE1_CUT1_RppA: FAE1/ 76.1 16 0.00034 39.0 9.4 76 394-478 86-161 (290)
323 PLN02192 3-ketoacyl-CoA syntha 75.8 8.5 0.00018 44.7 7.9 76 395-479 180-255 (511)
324 PRK06205 acetyl-CoA acetyltran 75.6 14 0.0003 41.9 9.6 100 371-480 4-106 (404)
325 PRK08142 acetyl-CoA acetyltran 75.6 12 0.00025 42.3 8.9 94 371-480 7-100 (388)
326 PRK09051 beta-ketothiolase; Pr 75.2 13 0.00028 42.0 9.2 101 371-480 5-108 (394)
327 PRK08256 lipid-transfer protei 74.9 10 0.00022 42.9 8.2 96 372-482 4-100 (391)
328 PLN00415 3-ketoacyl-CoA syntha 74.1 12 0.00025 42.9 8.3 77 393-478 136-212 (466)
329 COG4799 Acetyl-CoA carboxylase 73.4 1.9 4.1E-05 49.5 1.9 31 651-681 164-194 (526)
330 PRK06365 acetyl-CoA acetyltran 72.9 14 0.00031 42.2 8.9 98 371-480 18-117 (430)
331 PLN02377 3-ketoacyl-CoA syntha 72.7 15 0.00033 42.6 9.0 76 395-479 176-251 (502)
332 cd00751 thiolase Thiolase are 70.6 20 0.00042 40.4 9.3 98 373-480 2-102 (386)
333 PRK06366 acetyl-CoA acetyltran 70.2 19 0.00041 40.6 9.0 101 371-481 4-107 (388)
334 cd00327 cond_enzymes Condensin 69.7 24 0.00052 36.7 9.2 78 392-479 8-85 (254)
335 PRK05656 acetyl-CoA acetyltran 69.3 19 0.0004 40.8 8.7 101 371-481 4-107 (393)
336 PRK07801 acetyl-CoA acetyltran 67.9 26 0.00056 39.4 9.5 98 372-481 5-108 (382)
337 PRK06445 acetyl-CoA acetyltran 67.8 18 0.00039 40.8 8.2 80 392-481 33-114 (394)
338 PRK07851 acetyl-CoA acetyltran 67.7 20 0.00043 40.7 8.5 100 371-481 4-109 (406)
339 cd00831 CHS_like Chalcone and 67.2 14 0.00031 41.0 7.2 79 392-479 86-164 (361)
340 PRK07937 lipid-transfer protei 66.6 21 0.00046 39.6 8.3 46 371-417 4-50 (352)
341 PRK07855 lipid-transfer protei 66.2 24 0.00052 39.7 8.8 94 371-480 6-99 (386)
342 TIGR01930 AcCoA-C-Actrans acet 66.0 20 0.00044 40.3 8.2 80 392-481 22-102 (386)
343 PLN02820 3-methylcrotonyl-CoA 64.9 13 0.00028 43.9 6.4 101 647-754 436-556 (569)
344 PLN02854 3-ketoacyl-CoA syntha 64.8 22 0.00048 41.4 8.2 76 395-479 192-267 (521)
345 PLN03168 chalcone synthase; Pr 64.8 16 0.00035 41.1 7.0 76 394-479 104-180 (389)
346 PRK08313 acetyl-CoA acetyltran 64.6 22 0.00047 40.1 8.0 98 371-480 5-104 (386)
347 PRK08235 acetyl-CoA acetyltran 64.4 30 0.00064 39.1 9.1 100 371-480 4-106 (393)
348 PRK06954 acetyl-CoA acetyltran 64.3 27 0.0006 39.4 8.8 102 371-481 9-112 (397)
349 PRK09258 3-oxoacyl-(acyl carri 64.1 21 0.00044 39.3 7.7 79 392-479 62-140 (338)
350 TIGR02446 FadI fatty oxidation 62.7 39 0.00085 38.6 9.7 101 365-480 5-111 (430)
351 PRK08304 stage V sporulation p 62.4 19 0.00041 39.2 6.6 74 392-482 57-131 (337)
352 PRK08257 acetyl-CoA acetyltran 62.1 39 0.00085 39.4 9.7 98 371-480 6-107 (498)
353 PRK09268 acetyl-CoA acetyltran 62.0 35 0.00076 39.0 9.2 101 371-481 9-112 (427)
354 cd00827 init_cond_enzymes "ini 61.7 41 0.00088 36.5 9.4 79 391-480 48-127 (324)
355 PRK06064 acetyl-CoA acetyltran 61.6 27 0.00059 39.3 8.2 97 372-481 5-104 (389)
356 CHL00203 fabH 3-oxoacyl-acyl-c 61.4 28 0.0006 38.1 8.0 78 392-480 52-129 (326)
357 cd00829 SCP-x_thiolase Thiolas 60.3 26 0.00056 39.2 7.7 78 392-480 17-95 (375)
358 TIGR02845 spore_V_AD stage V s 59.8 22 0.00047 38.6 6.5 73 392-481 51-124 (327)
359 PLN02287 3-ketoacyl-CoA thiola 59.8 20 0.00044 41.2 6.8 100 371-480 48-152 (452)
360 TIGR00747 fabH 3-oxoacyl-(acyl 57.9 32 0.0007 37.3 7.8 79 392-480 52-130 (318)
361 PLN03170 chalcone synthase; Pr 57.8 24 0.00052 40.0 6.8 75 394-478 109-184 (401)
362 PLN03173 chalcone synthase; Pr 57.0 29 0.00063 39.2 7.3 45 394-439 105-149 (391)
363 PRK12880 3-oxoacyl-(acyl carri 56.3 32 0.00069 38.3 7.4 48 392-439 61-108 (353)
364 KOG0840|consensus 55.9 11 0.00023 39.1 3.1 132 582-737 98-256 (275)
365 PRK12404 stage V sporulation p 55.8 30 0.00065 37.5 6.7 72 393-481 56-128 (334)
366 TIGR00748 HMG_CoA_syn_Arc hydr 54.6 28 0.00061 38.5 6.6 79 391-480 50-130 (345)
367 PRK12879 3-oxoacyl-(acyl carri 54.5 35 0.00075 37.2 7.3 78 392-479 54-131 (325)
368 PRK06066 acetyl-CoA acetyltran 54.2 58 0.0013 36.7 9.0 95 371-480 6-103 (385)
369 KOG1393|consensus 53.7 2.1E+02 0.0045 31.8 12.4 170 204-425 62-262 (462)
370 KOG1202|consensus 53.6 7.5 0.00016 48.2 1.9 50 37-88 2011-2060(2376)
371 PRK07850 acetyl-CoA acetyltran 53.2 53 0.0011 37.0 8.6 101 371-481 4-108 (387)
372 PRK07108 acetyl-CoA acetyltran 53.0 55 0.0012 36.9 8.7 101 372-481 5-109 (392)
373 PRK08963 fadI 3-ketoacyl-CoA t 52.8 68 0.0015 36.7 9.5 100 371-480 7-109 (428)
374 PLN03172 chalcone synthase fam 52.8 42 0.00091 37.9 7.7 75 394-479 105-181 (393)
375 cd00830 KAS_III Ketoacyl-acyl 52.5 41 0.00089 36.5 7.5 78 392-480 51-129 (320)
376 PLN03171 chalcone synthase-lik 51.6 40 0.00087 38.1 7.3 46 393-439 110-155 (399)
377 PRK08131 acetyl-CoA acetyltran 51.5 67 0.0015 36.4 9.1 100 371-481 4-108 (401)
378 PRK07204 3-oxoacyl-(acyl carri 51.4 52 0.0011 35.9 8.1 78 392-479 53-132 (329)
379 PF00108 Thiolase_N: Thiolase, 51.0 73 0.0016 33.8 8.8 79 392-481 27-107 (264)
380 PLN03169 chalcone synthase fam 50.5 40 0.00086 38.1 7.1 46 393-439 108-153 (391)
381 PRK06816 3-oxoacyl-(acyl carri 50.4 42 0.00091 37.7 7.3 78 392-480 64-142 (378)
382 PRK06633 acetyl-CoA acetyltran 50.2 85 0.0018 35.4 9.6 79 392-480 28-107 (392)
383 PRK04262 hypothetical protein; 50.2 36 0.00077 37.7 6.6 79 391-479 51-130 (347)
384 PRK09052 acetyl-CoA acetyltran 49.0 90 0.0019 35.3 9.6 102 371-481 8-114 (399)
385 PRK07516 acetyl-CoA acetyltran 48.7 50 0.0011 37.2 7.6 97 372-481 5-104 (389)
386 PRK09352 3-oxoacyl-(acyl carri 48.6 53 0.0012 35.6 7.6 78 392-480 53-131 (319)
387 cd00825 decarbox_cond_enzymes 48.3 71 0.0015 34.7 8.6 80 392-483 12-117 (332)
388 PF00195 Chal_sti_synt_N: Chal 47.9 35 0.00075 35.3 5.5 72 395-478 104-178 (226)
389 PRK08242 acetyl-CoA acetyltran 47.3 81 0.0018 35.7 8.9 78 392-480 29-109 (402)
390 PRK06504 acetyl-CoA acetyltran 47.3 82 0.0018 35.5 8.9 100 371-481 4-108 (390)
391 PRK07515 3-oxoacyl-(acyl carri 45.8 59 0.0013 36.3 7.5 76 393-480 97-173 (372)
392 PRK06289 acetyl-CoA acetyltran 45.3 57 0.0012 37.0 7.3 98 371-480 5-108 (403)
393 PRK06840 hypothetical protein; 43.1 72 0.0016 35.0 7.6 78 391-478 53-131 (339)
394 PRK05963 3-oxoacyl-(acyl carri 42.8 68 0.0015 35.0 7.3 47 392-439 53-100 (326)
395 PLN02326 3-oxoacyl-[acyl-carri 42.6 59 0.0013 36.5 6.9 78 391-479 96-173 (379)
396 cd00826 nondecarbox_cond_enzym 40.7 70 0.0015 36.1 7.1 79 392-481 24-104 (393)
397 PTZ00455 3-ketoacyl-CoA thiola 40.6 1.3E+02 0.0028 34.6 9.2 85 392-481 49-139 (438)
398 PRK09050 beta-ketoadipyl CoA t 39.9 1.3E+02 0.0028 34.1 9.0 100 372-481 5-109 (401)
399 PF01039 Carboxyl_trans: Carbo 39.5 25 0.00054 41.0 3.3 107 645-754 362-480 (493)
400 PRK07661 acetyl-CoA acetyltran 39.5 1.6E+02 0.0034 33.2 9.7 100 371-480 4-108 (391)
401 KOG2708|consensus 37.7 1.9E+02 0.0042 29.6 8.6 24 395-418 53-76 (336)
402 TIGR02430 pcaF beta-ketoadipyl 37.6 1.3E+02 0.0029 34.0 8.7 102 371-481 3-108 (400)
403 PF06833 MdcE: Malonate decarb 37.3 54 0.0012 33.9 4.9 82 649-739 104-188 (234)
404 COG0332 FabH 3-oxoacyl-[acyl-c 36.2 1E+02 0.0022 33.7 7.2 79 392-482 53-133 (323)
405 PF10501 Ribosomal_L50: Riboso 32.1 44 0.00095 30.4 3.0 75 22-101 4-78 (112)
406 smart00250 PLEC Plectin repeat 29.8 40 0.00087 24.0 1.9 19 717-735 18-36 (38)
407 PRK08947 fadA 3-ketoacyl-CoA t 27.3 2.8E+02 0.0061 31.2 9.1 100 372-481 5-110 (387)
408 PRK13359 beta-ketoadipyl CoA t 26.8 2.6E+02 0.0055 31.7 8.7 100 371-481 4-109 (400)
409 PF00681 Plectin: Plectin repe 26.1 29 0.00062 25.9 0.6 20 716-735 17-36 (45)
410 TIGR02714 amido_AtzD_TrzD ring 26.0 1.5E+02 0.0031 32.3 5.9 69 393-472 133-202 (366)
411 COG3424 BcsA Predicted naringe 26.0 1.3E+02 0.0027 32.5 5.4 33 395-427 80-115 (356)
412 TIGR02445 fadA fatty oxidation 25.6 3.2E+02 0.0069 30.7 9.1 82 392-481 26-108 (385)
413 COG0528 PyrH Uridylate kinase 25.4 1.2E+02 0.0025 31.5 4.9 129 26-165 32-173 (238)
414 PF09663 Amido_AtzD_TrzD: Amid 23.9 1.8E+02 0.0038 31.8 6.1 71 392-473 131-202 (365)
415 PRK09585 anmK anhydro-N-acetyl 23.5 86 0.0019 34.9 3.9 29 392-420 70-98 (365)
416 PF07377 DUF1493: Protein of u 22.2 1.1E+02 0.0024 27.7 3.8 61 25-87 2-62 (111)
417 COG4799 Acetyl-CoA carboxylase 22.1 1.5E+02 0.0032 34.6 5.5 127 616-755 369-511 (526)
418 PRK06025 acetyl-CoA acetyltran 20.3 4.8E+02 0.01 29.7 9.1 78 392-481 30-111 (417)
No 1
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-90 Score=845.72 Aligned_cols=491 Identities=43% Similarity=0.730 Sum_probs=461.4
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|||+||+|+||+++++++||++|.+|+++++++|.+||+.+.||++++...++.+++++||+++++.||+.||||+|+
T Consensus 4 ~~IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPr 83 (1061)
T COG3321 4 EPIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPR 83 (1061)
T ss_pred CcEEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHH
Confidence 44999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccC-ccccchhhhccccccchhhHhhhhccC
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNL 273 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~ia~~lgl 273 (829)
|+..|||||||.++.+|+|||||||.+..+.+..||||+|.+..+|..+... .....++...++..+++++||||.|+|
T Consensus 84 EA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l 163 (1061)
T COG3321 84 EAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL 163 (1061)
T ss_pred HHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999766532 125667788888889999999999999
Q ss_pred CCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEE
Q psy11396 274 QGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGV 353 (829)
Q Consensus 274 ~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaa 353 (829)
+||+++|+++|||+++|+|+||++|++|+||++|+||++...+|.....+++.|+++++++|++||.++|||++|||+++
T Consensus 164 ~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~ 243 (1061)
T COG3321 164 SGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGV 243 (1061)
T ss_pred CCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHH
Q psy11396 354 LMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEA 433 (829)
Q Consensus 354 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~A 433 (829)
+||+++++|+++|++||++|+|+++|+||...+++.|+..+|.+++++||+++|++|++|+|||+|||||++||++|.++
T Consensus 244 vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lGDpiE~~a 323 (1061)
T COG3321 244 VVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLGDPIEANA 323 (1061)
T ss_pred EEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccccccccc
Q psy11396 434 LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIK 513 (829)
Q Consensus 434 l~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 513 (829)
|.++|+... ...+|.|||+|+||||+..|+|+++++|++|+|+|++|||++||++|||+++|+.+||+|+++.+||+..
T Consensus 324 L~~v~~~~~-~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~~~~W~~~ 402 (1061)
T COG3321 324 LGAVYGEGA-PAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWPTG 402 (1061)
T ss_pred HHHHhccCC-CCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEeecCCcCCCCC
Confidence 999999766 6788999999999999999999999999999999999999999999999999999999999999999643
Q ss_pred ccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHHHHHhhhcccCCccccccccc
Q psy11396 514 NKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGI 593 (829)
Q Consensus 514 ~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL 593 (829)
..||+|+||||||||+|+|+||||+++..+. .....|++|++||+++++|.++..++.++++++.... .+.++
T Consensus 403 -~~prrAgvssfG~gGtNaHvIlEe~~~~~~~-----~~~~~p~~l~lSAk~~~~L~~~a~~l~~~l~~~~~~~-~l~di 475 (1061)
T COG3321 403 -GGPRRAGVSSFGFGGTNAHVILEEAPPRAES-----TIPSSPRLLVLSAKTAERLAATAPRLADRLELQGGLL-SLADV 475 (1061)
T ss_pred -CCCceeeeeccCCCCCceEEEEeecCCcccC-----CCCCCCceeeeecCCHHHHHHHHHHHHHHHHhCcccc-hHHHH
Confidence 3899999999999999999999999972111 1123458999999999999999999999999987765 68899
Q ss_pred ccchhhhcccccceeeeeeC
Q psy11396 594 TDAFSYINSSVQYKVIIITG 613 (829)
Q Consensus 594 ~~~l~~~~~d~~vr~vVl~g 613 (829)
++++..-+.+-+.|.+++..
T Consensus 476 a~Tl~~gR~~~~~R~~~va~ 495 (1061)
T COG3321 476 AYTLQAGRPHFEHRLAVVAN 495 (1061)
T ss_pred HHHHHhhhhhccceeEEEeC
Confidence 99998877766778888874
No 2
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=100.00 E-value=2e-82 Score=817.63 Aligned_cols=470 Identities=34% Similarity=0.577 Sum_probs=426.9
Q ss_pred CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396 113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS 192 (829)
Q Consensus 113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~ 192 (829)
.+++||||||||++|++.++++||++|.+|+++++++|.+||+.+.||++++...++.+++++||+++++ ||+.+|+|+
T Consensus 5 ~~~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v~-FD~~~F~i~ 83 (2582)
T TIGR02813 5 KDMPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEVD-FNPMEFGLP 83 (2582)
T ss_pred CCCCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCccC-CCHhhcCCC
Confidence 4578999999999999999999999999999999999999999999999999999999999999999986 999999999
Q ss_pred HHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc--------------cc-------------
Q psy11396 193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL--------------IT------------- 245 (829)
Q Consensus 193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~--------------~~------------- 245 (829)
|++++.|||+|+|+++++|+||+||||... +++.+||||+|++.+++... ..
T Consensus 84 p~ea~~mDpqqrl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (2582)
T TIGR02813 84 PNILELTDISQLLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLI 162 (2582)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhh
Confidence 999999999999999999999999999754 78899999999876543210 00
Q ss_pred -----CccccchhhhccccccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH
Q psy11396 246 -----DPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH 320 (829)
Q Consensus 246 -----~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~ 320 (829)
....+.+..+++...|++++|||+.|||+||+++|+++|+||+.||++||++|++|+||++||||++...+|..+
T Consensus 163 ~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~ 242 (2582)
T TIGR02813 163 KKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMY 242 (2582)
T ss_pred hhhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHH
Confidence 011234456788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHH
Q psy11396 321 IKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQT 400 (829)
Q Consensus 321 ~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~ 400 (829)
..|++.+++++++.|+|||.+++||++|||+|++|||++++|+++|++|||+|+|++.++||+..+++.|+..+|.++|+
T Consensus 243 ~~fs~~~~lS~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~ 322 (2582)
T TIGR02813 243 MSFSKTPAFTTNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALK 322 (2582)
T ss_pred HHHHhccCcCCCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred HHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 401 KIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 401 ~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
+||++||++|+||+|||+|||||+.||++|.+||.++|+......++++|+|+|++|||+++|||++++++++++|+|++
T Consensus 323 ~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~ 402 (2582)
T TIGR02813 323 RAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKV 402 (2582)
T ss_pred HHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999875545567999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCcCCCCeeecccccccccc-ccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEE
Q psy11396 481 LPPTINYNILNEHIKLENSPFFINTKCKSWDIK-NKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVF 559 (829)
Q Consensus 481 ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll 559 (829)
|||++|+++|||.++++.++|+++++.++|+.. .+.+|+++||||||||+|+|+||++|++....... ......++++
T Consensus 403 iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~~~~~~~~~~-~~~~~~~~~~ 481 (2582)
T TIGR02813 403 LPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYSPKHQRDDQ-YRQRAVAQTL 481 (2582)
T ss_pred cCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeecCcccccccc-ccccCCccee
Confidence 999999999999999999999999999999632 35689999999999999999999999653322111 1122346789
Q ss_pred eccccchhhHHHHHHHHhhhcccCCc
Q psy11396 560 PLSAKNLSQLLIYAKLICNYISKDLK 585 (829)
Q Consensus 560 ~~Sa~~~~~L~~~~~~~~~~l~~n~~ 585 (829)
++||+++++|.+..+.+.+++..+..
T Consensus 482 ~lSA~~~~aL~~~l~~~~~~l~~~~~ 507 (2582)
T TIGR02813 482 LFTAANEKALVSSLKDWKNKLSAKAD 507 (2582)
T ss_pred eecCCCHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999988876543
No 3
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=3.5e-70 Score=613.59 Aligned_cols=399 Identities=24% Similarity=0.412 Sum_probs=354.4
Q ss_pred CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396 113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS 192 (829)
Q Consensus 113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~ 192 (829)
+.++|||||||+++|.|.++++||++|.+|++++++++ +|+...+ ..+.+|.++ +||+.+| ++
T Consensus 2 ~~~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~--~~~~~~~-----------~~~~~g~i~---~~~~~~~-~~ 64 (414)
T PRK08722 2 SKRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIE--HFDTTNF-----------STRFAGLVK---DFNCEEY-MS 64 (414)
T ss_pred CCCCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecC--ccccccC-----------CCceeEEcC---CCChhHc-CC
Confidence 45799999999999999999999999999999999875 4543332 234455554 4888887 89
Q ss_pred HHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchh
Q psy11396 193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILP 264 (829)
Q Consensus 193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a 264 (829)
+++++.||+++++++.++++||+|||+++...+..++||++|++.+++.... ..+..++++.+++..++.++
T Consensus 65 ~~~~~~~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a 144 (414)
T PRK08722 65 KKDARKMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIA 144 (414)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHH
Confidence 9999999999999999999999999998877888899999999877653221 23556778888899999999
Q ss_pred hHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----CCCCCCCCC
Q psy11396 265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFD 339 (829)
Q Consensus 265 ~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----~~~~~~pfd 339 (829)
++|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|...++..+..|...+.++ ++..|+|||
T Consensus 145 ~~is~~~gl~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd 224 (414)
T PRK08722 145 GNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWD 224 (414)
T ss_pred HHHHHHhCCCCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCc
Confidence 999999999999999999999999999999999999999999999999999999999999999987 456899999
Q ss_pred CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy11396 340 QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH 419 (829)
Q Consensus 340 ~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h 419 (829)
.+++|+++|||++++|||++++|+++|++||++|+|++.++|+.+...+.|.+.++.++|++||+++|++|+||||||+|
T Consensus 225 ~~~~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~h 304 (414)
T PRK08722 225 KDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAH 304 (414)
T ss_pred CCCCceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEcc
Confidence 99999999999999999999999999999999999999999988765556667778999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396 420 GTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS 499 (829)
Q Consensus 420 gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~ 499 (829)
||||+.+|.+|..||.++|+... ...++|+++|+++||+++|||++++++++++|++|+|||++|+++|+|.++++.
T Consensus 305 gtgt~~~D~~E~~al~~~fg~~~--~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~- 381 (414)
T PRK08722 305 GTSTPAGDVAEIKGIKRALGEAG--SKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDL- 381 (414)
T ss_pred CccCCCCCHHHHHHHHHHhcccC--CCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc-
Confidence 99999999999999999998532 235899999999999999999999999999999999999999999999987642
Q ss_pred CeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
++.+.++| ...+++++|||||||+|+|+||+.
T Consensus 382 ---v~~~~~~~----~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 382 ---VPHTARKV----ESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred ---CCCccccC----CCCCEEEEecccCCCceEEEEEec
Confidence 44444444 246899999999999999999974
No 4
>KOG1394|consensus
Probab=100.00 E-value=3.7e-71 Score=563.98 Aligned_cols=401 Identities=28% Similarity=0.441 Sum_probs=358.3
Q ss_pred CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396 114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP 193 (829)
Q Consensus 114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p 193 (829)
.++|||||||+++|+|.++.++|++|.+|+++|+.+... +... ..+...|.++. |+.+-| +++
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~--d~k~-----------~p~~v~g~Ip~---f~~e~~-~s~ 85 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGP--DYKS-----------IPFTVAGKIPR---FSVEDY-VSK 85 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCccccccc--cccc-----------Ccchheeeccc---cccccc-cch
Confidence 589999999999999999999999999999999998631 1111 11223444444 666665 899
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHHcCCCCC---CCCCCceEEEEccccccccccc--------cCccccchhhhccccccc
Q psy11396 194 SEAEYMDPQQRLFLQNCWTCIEDAGYNPF---SLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSI 262 (829)
Q Consensus 194 ~~~~~~d~~~~l~l~aa~~AL~dAGl~~~---~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 262 (829)
...+.|++...+++.++.+||+|||+.+. ..+..++||.+|++.++...+. +..+.++|+..+..+.|+
T Consensus 86 ~~~r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM 165 (440)
T KOG1394|consen 86 GDERRMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNM 165 (440)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhccc
Confidence 99999999999999999999999999765 3466889999999998764433 347789999999999999
Q ss_pred hhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC-----CCCCCC
Q psy11396 263 LPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP-----DGHCYS 337 (829)
Q Consensus 263 ~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~-----~~~~~p 337 (829)
.+++||..|||+||+.+++++|++|..+|..|++.|+.|++|++|+||+|....|..+..|.+.+.|+. ...+||
T Consensus 166 ~ag~vsm~~gl~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRP 245 (440)
T KOG1394|consen 166 AAGYVSMKYGLRGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRP 245 (440)
T ss_pred ccchhhhhhcCcCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999985 237999
Q ss_pred CCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy11396 338 FDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLE 417 (829)
Q Consensus 338 fd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve 417 (829)
||.++|||++|||++++|||++|+|++||++|||++.|++.++|.+|.+.+.|++.+...+|.+||++||+.|+||+||+
T Consensus 246 fD~~RdGFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvN 325 (440)
T KOG1394|consen 246 FDKKRDGFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVN 325 (440)
T ss_pred CccCCCceeeccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcC
Q psy11396 418 AHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLE 497 (829)
Q Consensus 418 ~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~ 497 (829)
+|+|.|++||.+|.+||.++|++.... .+|+|.|+.+||.+||+|.++.+..+++++++++||++|++.|++.++++
T Consensus 326 AHATST~~GD~aE~~Ai~~vf~~~~~~---~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~ 402 (440)
T KOG1394|consen 326 AHATSTPLGDAAEAEAIKRVFGEHNIA---SKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLD 402 (440)
T ss_pred cccccCcCchHHHHHHHHHHhccCCcc---cccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCcccccc
Confidence 999999999999999999999975432 37999999999999999999999999999999999999999999977765
Q ss_pred CCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 498 NSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 498 ~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
+++....+|. ...++++++.|||||||+|+.+++..+
T Consensus 403 ----~~~~~~~~~~-~~~~~~valsNSFGFGGtNaSl~fa~~ 439 (440)
T KOG1394|consen 403 ----YVPLKASEKK-GGNKVRVALSNSFGFGGTNASLCFAKF 439 (440)
T ss_pred ----cccccccccc-ccccceEEEecccccCCcchhheeeec
Confidence 3445566673 335789999999999999999998754
No 5
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=100.00 E-value=1.9e-69 Score=617.18 Aligned_cols=398 Identities=26% Similarity=0.393 Sum_probs=349.0
Q ss_pred CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396 113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS 192 (829)
Q Consensus 113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~ 192 (829)
+.++|||||||+++|.|.++++||++|.+|++++.+++ ||+...|. .+..|.++ .|++..| ++
T Consensus 127 ~~~rVvITG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~--~f~~~~~~-----------~~~ag~i~---~f~~~~~-l~ 189 (540)
T PLN02787 127 KQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIE--RFDCSQFP-----------TRIAGEIK---SFSTDGW-VA 189 (540)
T ss_pred CCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcccccC--ccchhhCC-----------cccccccc---ccChhhc-CC
Confidence 34799999999999999999999999999999999885 55433321 23344444 3666655 89
Q ss_pred HHHhhcCCHHHHHHHHHHHHHHHHcCCCCC---CCCCCceEEEEcccccccccc-------ccCccccchhhhccccccc
Q psy11396 193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPF---SLSGSLCGVFVGCAVSDYNKL-------ITDPKMYNAYALMGESVSI 262 (829)
Q Consensus 193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~---~i~~~~~Gv~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 262 (829)
+++.+.||+++++++.++++||+|||++++ .+++.++||++|++.+++..+ ......++|+.++....+.
T Consensus 190 ~k~~r~md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~ 269 (540)
T PLN02787 190 PKLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNM 269 (540)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccH
Confidence 999999999999999999999999999764 567889999999987654321 1223456677777777888
Q ss_pred hhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----CCCCCCC
Q psy11396 263 LPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYS 337 (829)
Q Consensus 263 ~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----~~~~~~p 337 (829)
.+++|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|....|..+..|...+.++ ++..|+|
T Consensus 270 ~a~~ia~~~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rP 349 (540)
T PLN02787 270 GSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRP 349 (540)
T ss_pred HHHHHHHHhCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCC
Confidence 89999999999999999999999999999999999999999999999999989999989999988887 4568999
Q ss_pred CCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy11396 338 FDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLE 417 (829)
Q Consensus 338 fd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve 417 (829)
||.+++||++|||++++|||++++|+++|++|||+|+|++.++|+.+...+.|++.++.++|++||++||++|+|||||+
T Consensus 350 FD~~rdGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyIn 429 (540)
T PLN02787 350 WDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYIN 429 (540)
T ss_pred cccCCCCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence 99999999999999999999999999999999999999999999998777888899999999999999999999999999
Q ss_pred ecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcC
Q psy11396 418 AHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLE 497 (829)
Q Consensus 418 ~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~ 497 (829)
+|||||+.+|..|.+||.++|+.. ..++|+++|+++||++||+|++++++++++|++|+|||++|+++|+|.++++
T Consensus 430 aHGTGT~~gD~~E~~Ai~~~Fg~~----~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~ 505 (540)
T PLN02787 430 AHATSTKAGDLKEYQALMRCFGQN----PELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTK 505 (540)
T ss_pred ccCccCCCCCHHHHHHHHHHhCCC----CCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcc
Confidence 999999999999999999999852 3489999999999999999999999999999999999999999999998754
Q ss_pred CCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 498 NSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 498 ~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
+.+..+.++| ..+++++|||||||+|+++||+++
T Consensus 506 ---~~v~~~~~~~-----~ir~aL~nSfGFGG~Naslvl~~~ 539 (540)
T PLN02787 506 ---VLVGPKKERL-----DIKVALSNSFGFGGHNSSILFAPY 539 (540)
T ss_pred ---cccccccccC-----CcCEEEEeeecCCceeEEEEEEeC
Confidence 2233333333 468999999999999999999975
No 6
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.3e-68 Score=607.48 Aligned_cols=401 Identities=25% Similarity=0.397 Sum_probs=356.4
Q ss_pred CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcc-----cccCCc
Q psy11396 113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDI-----EIFDPL 187 (829)
Q Consensus 113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~fd~~ 187 (829)
+.++|+|||||+++|.|.++++||++|++|+++++++|..+|.. + ....+|+++++ +.||+.
T Consensus 2 ~~~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~~--~-----------~~~~~g~i~~~~~~~~~~fd~~ 68 (424)
T PRK06333 2 NKKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGD--L-----------ATKIGGQVPDLAEDAEAGFDPD 68 (424)
T ss_pred CCCCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCcccccC--C-----------CCceEEEeccccccccccCChh
Confidence 45799999999999999999999999999999999998766531 1 12344555442 238888
Q ss_pred CCCCCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCC-CCCceEEEEccccccccccc--------cCccccchhhhccc
Q psy11396 188 FFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSL-SGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGE 258 (829)
Q Consensus 188 ~f~i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i-~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~ 258 (829)
+| +++++++.|||+++|++.++++||+|||+++..+ +..++|||+|++.+.+..+. ..+..+.++.+...
T Consensus 69 ~~-i~~~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (424)
T PRK06333 69 RY-LDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSF 147 (424)
T ss_pred Hc-CCHHHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhh
Confidence 88 9999999999999999999999999999998887 77899999999877653322 23445677788888
Q ss_pred cccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC------C
Q psy11396 259 SVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP------D 332 (829)
Q Consensus 259 ~~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~------~ 332 (829)
..+.++++|++.||++||+++|+++|+||+.||..|+++|++|+||++||||+|.+.++.....|...+.++. +
T Consensus 148 ~~~~~a~~is~~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~ 227 (424)
T PRK06333 148 LTNMAAGHVSIRYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPE 227 (424)
T ss_pred hhhHHHHHHHHHhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCC
Confidence 8899999999999999999999999999999999999999999999999999999889988888888888763 4
Q ss_pred CCCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC
Q psy11396 333 GHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412 (829)
Q Consensus 333 ~~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~d 412 (829)
..|+|||.+++|+++||||+++|||++++|+++|++||++|+|++.++|+.+.....|++.++.++|++||++||++|+|
T Consensus 228 ~~~~Pfd~~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~d 307 (424)
T PRK06333 228 QASRPFDRDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEE 307 (424)
T ss_pred cCCCCCCCCCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHH
Confidence 68999999999999999999999999999999999999999999999999876666778889999999999999999999
Q ss_pred ccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCc
Q psy11396 413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNE 492 (829)
Q Consensus 413 Id~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~ 492 (829)
|||||+|||||+.+|..|..+|.++|+. ..++++++.|+++||++||||++++++++++|++|+|||++|+++|+|
T Consensus 308 Id~i~~hgtgt~~~D~~E~~al~~~fg~----~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~ 383 (424)
T PRK06333 308 VQHLNAHATSTPVGDLGEVAAIKKVFGH----VSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDP 383 (424)
T ss_pred CCEEeccCCCCccchHHHHHHHHHHhCC----CCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCC
Confidence 9999999999999999999999999983 345899999999999999999999999999999999999999999999
Q ss_pred cCC-cCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396 493 HIK-LENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI 540 (829)
Q Consensus 493 ~~~-~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~ 540 (829)
.++ ++ ++.++.++|+ .+++++|||||||+|+|+||+++.
T Consensus 384 ~~~~~~----~~~~~~~~~~-----~~~al~~s~gfGG~n~~~il~~~~ 423 (424)
T PRK06333 384 AAEGLD----VVANKARPMD-----MDYALSNGFGFGGVNASILFRRWE 423 (424)
T ss_pred Cccccc----cccCCCcccC-----cCEEEEeeecCCCeeEEEEEeccC
Confidence 886 32 3566777773 578999999999999999999764
No 7
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.4e-67 Score=592.70 Aligned_cols=394 Identities=26% Similarity=0.340 Sum_probs=345.9
Q ss_pred CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396 114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP 193 (829)
Q Consensus 114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p 193 (829)
.++|||||||+++|.|.+.++||++|.+|+++++++|..+++... ...+.++++. +.||+. +++
T Consensus 11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~-----------~~~~~~g~i~--~~~d~~---~~~ 74 (418)
T PRK07910 11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFD-----------LPVRIGGHLL--EEFDHQ---LTR 74 (418)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhccC-----------CCcceEEEec--cCcccc---CCH
Confidence 379999999999999999999999999999999998753322111 1123445552 346653 789
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhh
Q psy11396 194 SEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPA 265 (829)
Q Consensus 194 ~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~ 265 (829)
++++.|||++++++.++++||+|||++ ..++.++||++|++.+.+.... ..+..++++.+...+++.++.
T Consensus 75 ~~~~~~d~~~~~~l~aa~~AledAg~~--~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~ 152 (418)
T PRK07910 75 VELRRMSYLQRMSTVLGRRVWENAGSP--EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAA 152 (418)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHcCCC--CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHH
Confidence 999999999999999999999999985 4677899999999876543211 234456677788888999999
Q ss_pred HhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCC-CC-----CCCCCCCCC
Q psy11396 266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGM-LS-----PDGHCYSFD 339 (829)
Q Consensus 266 ~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~-ls-----~~~~~~pfd 339 (829)
++++.++++||+++++++|+|++.||++|+++|++|+||++||||+|..+++..+..|..++. ++ +++.|+|||
T Consensus 153 ~is~~~~~~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd 232 (418)
T PRK07910 153 AVGLERHAKAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFD 232 (418)
T ss_pred HHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999998 76 568999999
Q ss_pred CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy11396 340 QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH 419 (829)
Q Consensus 340 ~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h 419 (829)
.+++|+++|||++++|||++++|+++|++||++|+|++.++|+.+...+.|.+.++.++|++||+++|++|+||||||+|
T Consensus 233 ~~~~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~h 312 (418)
T PRK07910 233 KDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAH 312 (418)
T ss_pred CCCCCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcC
Confidence 99999999999999999999999999999999999999999999888888889999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396 420 GTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS 499 (829)
Q Consensus 420 gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~ 499 (829)
||||+.+|++|.+||.++|+.. .++|+++|+++||++||||++++++++++|++++|||++|+++|||+++++..
T Consensus 313 gtgt~~~D~~E~~Al~~~fg~~-----~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~ 387 (418)
T PRK07910 313 ATGTSVGDVAEGKAINNALGGH-----RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVV 387 (418)
T ss_pred CcCCCCCCHHHHHHHHHHhCCC-----CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccC
Confidence 9999999999999999999842 25799999999999999999999999999999999999999999999986532
Q ss_pred CeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
+. .+| ....+++++|||||||+|+|+||+.+
T Consensus 388 ----~~--~~~---~~~~~~al~nsfGfGG~N~slvl~~~ 418 (418)
T PRK07910 388 ----AG--EPR---PGNYRYAINNSFGFGGHNVALAFGRY 418 (418)
T ss_pred ----CC--CCc---CCCccEEEEeeecCCCeeEEEEEecC
Confidence 22 233 23579999999999999999999863
No 8
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=100.00 E-value=8.7e-68 Score=599.40 Aligned_cols=416 Identities=24% Similarity=0.355 Sum_probs=357.5
Q ss_pred CCCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCC-ccccccCcceeecccccC---cccccCCc
Q psy11396 112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYD-SDKNAIGKTICKKMGSLE---DIEIFDPL 187 (829)
Q Consensus 112 ~~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~fd~~ 187 (829)
...++|||||||+++|+|.++++||++|.+|+++++++|..||....++. +++...+...++..++++ +++.||+.
T Consensus 3 ~~~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~ 82 (437)
T PLN02836 3 LPTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEE 82 (437)
T ss_pred CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChH
Confidence 35679999999999999999999999999999999999998887665442 333333444556666653 34568888
Q ss_pred CCCCCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCC-CCCCceEEEEccccccccccc--------cCccccchhhhccc
Q psy11396 188 FFNISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFS-LSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGE 258 (829)
Q Consensus 188 ~f~i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~-i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~ 258 (829)
+|.. .+++++..++++.++++||+|||+.+.. .+..++||++|++.+.+.... .....++++.+++.
T Consensus 83 ~~~~----~~~~~~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 158 (437)
T PLN02836 83 LWLN----SRSSSRFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRI 158 (437)
T ss_pred Hhcc----ccccCHHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhh
Confidence 8744 3578999999999999999999997653 467899999998765543221 23456788888899
Q ss_pred cccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC------CC
Q psy11396 259 SVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PD 332 (829)
Q Consensus 259 ~~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls------~~ 332 (829)
+.|+++++|++.||++||+++|+++|+||+.||..|+++|++|+||++||||+|...++..+..|...+.++ ++
T Consensus 159 ~~n~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~ 238 (437)
T PLN02836 159 LINMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPT 238 (437)
T ss_pred cccHHHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcc
Confidence 999999999999999999999999999999999999999999999999999999988898888888887765 45
Q ss_pred CCCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC
Q psy11396 333 GHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPND 412 (829)
Q Consensus 333 ~~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~d 412 (829)
..|+|||.+++|+++|||++++||+++++|+++|+++|++|+|++.++|+.+...+.+.+.++.+++++||++||++|+|
T Consensus 239 ~~~~pfd~~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~d 318 (437)
T PLN02836 239 EASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQ 318 (437)
T ss_pred cccCCcccCCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhH
Confidence 67999999999999999999999999999999999999999999999998776555666778889999999999999999
Q ss_pred ccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCc
Q psy11396 413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNE 492 (829)
Q Consensus 413 Id~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~ 492 (829)
|||||+|||||+.+|..|.+++.++|+.... .+.++|++.|+++||+++|||++++++++++|++++|||++|+++|+|
T Consensus 319 Id~ve~hgtgt~~~D~~E~~ai~~~~~~~~~-~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p 397 (437)
T PLN02836 319 VDYVNAHATSTPLGDAVEARAIKTVFSEHAT-SGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDP 397 (437)
T ss_pred cCEEEccCCcCcCcCHHHHHHHHHHhccccc-CCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCC
Confidence 9999999999999999999999999986432 346899999999999999999999999999999999999999999999
Q ss_pred cCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396 493 HIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI 540 (829)
Q Consensus 493 ~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~ 540 (829)
.++++..+. . ++ +....+++++|||||||+|+|+||+++|
T Consensus 398 ~~~~~~~~~---~---~~--~~~~~~~~l~nsfgfGG~na~lvl~~~~ 437 (437)
T PLN02836 398 IFDDGFVPL---T---AS--KAMLIRAALSNSFGFGGTNASLLFTSPP 437 (437)
T ss_pred CCCcccCcc---c---CC--CCCCccEEEEecccCCCeeEEEEEecCC
Confidence 998654432 1 11 2235789999999999999999999764
No 9
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=100.00 E-value=2.6e-67 Score=588.70 Aligned_cols=387 Identities=22% Similarity=0.312 Sum_probs=341.8
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|||||||+++|+|.++++||++|.+|++++++++ +|+...|+ .+..+.++ .||+.+ .++++
T Consensus 1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~--~~~~~~~~-----------~~~~g~i~---~~~~~~-~~~~~ 63 (399)
T cd00832 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPIT--RFDPSGYP-----------ARLAGEVP---DFDAAE-HLPGR 63 (399)
T ss_pred CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCC--ccccccCC-----------CceeEEeC---CcChhh-cCCHH
Confidence 479999999999999999999999999999999874 56544432 12233333 477765 48999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccchhhH
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSILPAR 266 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~ 266 (829)
+.+.||+++++++.++++||+|||+++..+++.++||++|++.+.+... ...+..++++.++....+.++++
T Consensus 64 ~~~~~d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 143 (399)
T cd00832 64 LLPQTDRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQ 143 (399)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHH
Confidence 9999999999999999999999999988888899999999987765321 12345667777777788889999
Q ss_pred hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC----CCCCCCCCCCC
Q psy11396 267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP----DGHCYSFDQRA 342 (829)
Q Consensus 267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~----~~~~~pfd~~~ 342 (829)
|++.||++||+++|+++|+|++.||..|+++|++|+ |++||||+|..++|..+..|...+.++. ...|+|||.++
T Consensus 144 is~~~gl~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~ 222 (399)
T cd00832 144 ISIRHGMRGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA 222 (399)
T ss_pred HHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC
Confidence 999999999999999999999999999999999999 9999999999999999999999999874 34799999999
Q ss_pred CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396 343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG 422 (829)
Q Consensus 343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg 422 (829)
+|+++|||++++|||++++|+++|++||++|.|++.++|+.+.. +...++.++|++||+++|++|+|||||++||||
T Consensus 223 ~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~---~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtg 299 (399)
T cd00832 223 AGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGS---GRPPGLARAIRLALADAGLTPEDVDVVFADAAG 299 (399)
T ss_pred CCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCC---CCHHHHHHHHHHHHHHcCCCHHHccEEEeccCc
Confidence 99999999999999999999999999999999999999987642 358899999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396 423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF 502 (829)
Q Consensus 423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~ 502 (829)
|+.+|..|.++|.++|+.. .+||++.|+++||+++|+|++++++++++|++++|||++|+++|+|.++++.
T Consensus 300 t~~~D~~E~~al~~~fg~~-----~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~---- 370 (399)
T cd00832 300 VPELDRAEAAALAAVFGPR-----GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDL---- 370 (399)
T ss_pred CCCCCHHHHHHHHHHhCCC-----CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccc----
Confidence 9999999999999999742 4789999999999999999999999999999999999999999999887542
Q ss_pred eccccccccccccCccEEEEeccCCCCceEEEEe
Q psy11396 503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536 (829)
Q Consensus 503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl 536 (829)
+..+.++ ...+++++|||||||+|+|+||
T Consensus 371 v~~~~~~-----~~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 371 VTGRPRP-----AALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred CCCcccC-----CCCCEEEEeccCCCCcceEEEC
Confidence 3333222 2578999999999999999986
No 10
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=100.00 E-value=5.9e-67 Score=595.37 Aligned_cols=422 Identities=50% Similarity=0.872 Sum_probs=388.1
Q ss_pred EEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCccccc-CCccccccCcceeecccccCcccccCCcCCCCCHHH
Q psy11396 117 IAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDF-YDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPSE 195 (829)
Q Consensus 117 IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~~ 195 (829)
|+|||||+++|.+.++++||++|.+|+++++++|.+||+...+ +++.....++..++.+++++++..||+..|++++++
T Consensus 1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~~~~ 80 (424)
T smart00825 1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFFGISPRE 80 (424)
T ss_pred CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHcCCCHHH
Confidence 7999999999999999999999999999999999888876654 345555566667788888888888999999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc-cCccccchhhhccccccchhhHhhhhccCC
Q psy11396 196 AEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI-TDPKMYNAYALMGESVSILPARVSYFLNLQ 274 (829)
Q Consensus 196 ~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 274 (829)
.+.|+++++|+++++++||+|||+++.++++.++|||+|+..++|.... ..+..+.++.+.+...+..+++++..+|++
T Consensus 81 ~~~~~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~ 160 (424)
T smart00825 81 AEAMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR 160 (424)
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999888775443 234556677777777888999999999999
Q ss_pred CcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEE
Q psy11396 275 GPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVL 354 (829)
Q Consensus 275 Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaal 354 (829)
||+++|+++|+|++.||..|+++|++|++|++||||+|....+.....|...+.+++++.++|||.+++|+++|||++++
T Consensus 161 g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaal 240 (424)
T smart00825 161 GPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVV 240 (424)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEE
Confidence 99999999999999999999999999999999999999988998888999999999999999999999999999999999
Q ss_pred EEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHH
Q psy11396 355 MLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL 434 (829)
Q Consensus 355 vL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al 434 (829)
||++.++|+++|+++|++|.|++.++++.+.....|+...+.+++++||+++|++++|||||++|||||+.+|..|.++|
T Consensus 241 VLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al 320 (424)
T smart00825 241 VLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEAL 320 (424)
T ss_pred EEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999988777778899999999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccc
Q psy11396 435 CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKN 514 (829)
Q Consensus 435 ~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 514 (829)
.++|+.......+++|++.|+++||+.+|||++++++++++|++|+|||++|+++|+|.++++..+++++++.++|+ ..
T Consensus 321 ~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 399 (424)
T smart00825 321 AAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVPTEATPWP-AT 399 (424)
T ss_pred HHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEccCCCcCCC-CC
Confidence 99998654444568999999999999999999999999999999999999999999999999999999999999995 34
Q ss_pred cCccEEEEeccCCCCceEEEEeeec
Q psy11396 515 KKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 515 ~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
..++++++|||||||+|+|+||++|
T Consensus 400 ~~~~~~l~~s~gfgg~n~~lvl~~~ 424 (424)
T smart00825 400 GRPRRAGVSSFGFGGTNAHVILEEA 424 (424)
T ss_pred CCccEEEEeccCCCCceEEEEEecC
Confidence 5689999999999999999999986
No 11
>KOG1202|consensus
Probab=100.00 E-value=1.7e-67 Score=592.56 Aligned_cols=450 Identities=35% Similarity=0.628 Sum_probs=399.4
Q ss_pred CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396 113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS 192 (829)
Q Consensus 113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~ 192 (829)
..++|||.||...+|-..++++||++|.+|.+-+++=| .||.. .+|+ ..++.|-+.+...||..||+..
T Consensus 9 ~~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~-rrW~~-G~yg---------LP~r~gKlKdL~kFDa~ff~vh 77 (2376)
T KOG1202|consen 9 KQEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDP-RRWEA-GLYG---------LPKRSGKLKDLNKFDAGFFGVH 77 (2376)
T ss_pred cCCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCc-ccccc-cccC---------CchhhcchhhhhhhcccccCcC
Confidence 46899999999999999999999999999999888754 57864 3443 2234556677889999999999
Q ss_pred HHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc-cCccccchhhhccccccchhhHhhhhc
Q psy11396 193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI-TDPKMYNAYALMGESVSILPARVSYFL 271 (829)
Q Consensus 193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~ia~~l 271 (829)
|+++..|||+.||.+++.|||+-||||+|.+++++++|||+|.+.+...... .++..+..|...+...+++++||||.|
T Consensus 78 ~KQa~~MDPq~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytF 157 (2376)
T KOG1202|consen 78 PKQANTMDPQLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTF 157 (2376)
T ss_pred cccccccCHHHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEE
Confidence 9999999999999999999999999999999999999999998877665443 457778889999999999999999999
Q ss_pred cCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccce
Q psy11396 272 NLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV 351 (829)
Q Consensus 272 gl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGa 351 (829)
+++||++.++++|+|++.|+..|++.+++|+||.+||+|+...+.|.....|-++|+++++|.|+.||...+||.++||+
T Consensus 158 DfqGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~ 237 (2376)
T KOG1202|consen 158 DFQGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGV 237 (2376)
T ss_pred eccCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEccchhhhhCCCceEEEEEEeeeecCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHH
Q psy11396 352 GVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGK-TNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIE 430 (829)
Q Consensus 352 aalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~-~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E 430 (829)
++++|.+.+.|++ +||.|.-..+|.||. ..+.+-|+++.|.+.+++.|..+|++|+++-|||+|||||+.||+.|
T Consensus 238 ~avllqrk~~ArR----vYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGDpQE 313 (2376)
T KOG1202|consen 238 VAVLLQRKSLARR----VYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGDPQE 313 (2376)
T ss_pred EEEEEehhHHHHH----HHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCCChHH
Confidence 9999999988864 799999999999995 46799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-cCCCCeeecccccc
Q psy11396 431 FEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK-LENSPFFINTKCKS 509 (829)
Q Consensus 431 ~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~-~~~~~~~v~~~~~~ 509 (829)
+.+|.+.|.. .+..++.|||+|+|+||++-|||+..++|.+++|++|.|||++||++|||++. +.+..+.|.+++.|
T Consensus 314 aN~it~~fC~--~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~lp 391 (2376)
T KOG1202|consen 314 ANGITRFFCA--TRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPLP 391 (2376)
T ss_pred hhhHHHHHhh--cCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCCCC
Confidence 9999999986 34667999999999999999999999999999999999999999999999997 77788999999999
Q ss_pred ccccccCccEEEEeccCCCCceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHHHHHhhhcccCCccccc
Q psy11396 510 WDIKNKKKRMAAINSFGFSGTNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTV 589 (829)
Q Consensus 510 ~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~ 589 (829)
|+ ...+++|||||||+|+|+||+..++..+.. .| ....+.++..|+||+++..++.+. ...|..+.++
T Consensus 392 ~~-----GGivGiNSFGFGGsN~HviLks~~~~~P~~--tP-~~~~~~l~~~sgRT~eAVeqll~~----~~~n~~D~~~ 459 (2376)
T KOG1202|consen 392 WR-----GGIVGINSFGFGGSNAHVILKSNTKPKPAP--TP-HAGLLRLVRASGRTPEAVEQLLEQ----ALRNSDDLEL 459 (2376)
T ss_pred cc-----CceeeeeccccCCCceeEEeccCCCCCCCC--CC-CCCcceeeecCCCCHHHHHHHHHH----HhcccchHHH
Confidence 93 357999999999999999999987643221 11 112456788999999998776443 3344444443
Q ss_pred cc
Q psy11396 590 VK 591 (829)
Q Consensus 590 ~~ 591 (829)
+.
T Consensus 460 l~ 461 (2376)
T KOG1202|consen 460 LS 461 (2376)
T ss_pred HH
Confidence 33
No 12
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=3.3e-66 Score=586.16 Aligned_cols=396 Identities=30% Similarity=0.465 Sum_probs=348.1
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|+|||||+++|.|.++++||++|++|++++++++ +|+...+ .....+.++ .||+..| ++++
T Consensus 2 ~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~--~~~~~~~-----------~~~~~g~i~---~f~~~~~-~~~~ 64 (411)
T PRK07314 2 RRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPIT--HFDTSDL-----------AVKIAGEVK---DFNPDDY-MSRK 64 (411)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECC--cccccCC-----------CccEEEEeC---CcChhhc-CCHH
Confidence 689999999999999999999999999999999986 3432221 123344444 4888888 9999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhhH
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPAR 266 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~ 266 (829)
+++.|||+++|+++++++||+|||+++.++++.++||++|++.+.+.... ..+..+.++.+++...+..+++
T Consensus 65 ~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 144 (411)
T PRK07314 65 EARRMDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGH 144 (411)
T ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHH
Confidence 99999999999999999999999999999999999999998766542211 1234566777778888899999
Q ss_pred hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC-----CCCCCCCCCC
Q psy11396 267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP-----DGHCYSFDQR 341 (829)
Q Consensus 267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~-----~~~~~pfd~~ 341 (829)
+++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|.+.+|.....|...+.++. +..|+|||.+
T Consensus 145 is~~~gl~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~ 224 (411)
T PRK07314 145 VSIRYGAKGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKD 224 (411)
T ss_pred HHHHhCCCCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCC
Confidence 99999999999999999999999999999999999999999999999889988888888887764 5679999999
Q ss_pred CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396 342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421 (829)
Q Consensus 342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt 421 (829)
++|+++|||++++||+++++|+++|++||++|+|++.++|+.+...+.+.+.++.+++++||+++|++|+||||||+|||
T Consensus 225 ~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgt 304 (411)
T PRK07314 225 RDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGT 304 (411)
T ss_pred CCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEcccc
Confidence 99999999999999999999999999999999999999998776556666778899999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF 501 (829)
Q Consensus 422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~ 501 (829)
||+.+|..|.++|.++|+.. ..+++|++.|+++||+++|||++++++++++|++|+|||++|+++|+|.++++..
T Consensus 305 gt~~~d~~E~~al~~~~~~~---~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~-- 379 (411)
T PRK07314 305 STPAGDKAETQAIKRVFGEH---AYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYV-- 379 (411)
T ss_pred CCccccHHHHHHHHHHhccc---CCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccc--
Confidence 99999999999999999752 2458999999999999999999999999999999999999999999998875432
Q ss_pred eeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
+.+ .....+++++||||||||+|+|+||+.+
T Consensus 380 --~~~-----~~~~~~~~al~~s~gfGG~n~~~vl~~~ 410 (411)
T PRK07314 380 --PNE-----ARERKIDYALSNSFGFGGTNASLVFKRY 410 (411)
T ss_pred --CCc-----ccCCCCCEEEEecccCCCceEEEEEecC
Confidence 222 2234678999999999999999999976
No 13
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=100.00 E-value=5e-66 Score=576.63 Aligned_cols=388 Identities=27% Similarity=0.401 Sum_probs=333.8
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|||||||+++|.|.+.++||++|++|+++|++++. |+...+ .++..+.+ .||+..+ ++++
T Consensus 2 ~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~--~~~~~~-----------~~~~~g~~----~~~~~~~-~~~~ 63 (406)
T PRK07967 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPE--FAEMGM-----------RSQVWGNV----KLDPTGL-IDRK 63 (406)
T ss_pred CcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCc--ccccCC-----------CCceEEEc----CCChhhc-CCHH
Confidence 6899999999999999999999999999999998753 322111 12233332 2666555 7788
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc---------cCccccchhhhccccccchhh
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI---------TDPKMYNAYALMGESVSILPA 265 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~a~ 265 (829)
..+.|++..++++.++.+||+|||+.+..+++.++||++|++.+.+.... ..+..++++.++..+++.+++
T Consensus 64 ~~~~~~r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~ 143 (406)
T PRK07967 64 VMRFMGDASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSA 143 (406)
T ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHH
Confidence 88999999999999999999999998888888999999999766542211 234567788888999999999
Q ss_pred HhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC------CCCCCCCCC
Q psy11396 266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFD 339 (829)
Q Consensus 266 ~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls------~~~~~~pfd 339 (829)
+|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|.. .+.....|..++.++ ++..|||||
T Consensus 144 ~is~~~~l~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~-~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd 222 (406)
T PRK07967 144 CLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL-DWEMSCLFDAMGALSTKYNDTPEKASRAYD 222 (406)
T ss_pred HHHHHHCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc-ChHHHHHHHHhhhhccCCCCCCCcCCcCCc
Confidence 9999999999999999999999999999999999999999999999974 445556688888876 456899999
Q ss_pred CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy11396 340 QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH 419 (829)
Q Consensus 340 ~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h 419 (829)
.+++|+++|||++++|||++++|++||++||++|.|++.++|+.+ ++.|++.++.++|++||++++ + |||||++|
T Consensus 223 ~~r~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~--~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~aH 297 (406)
T PRK07967 223 ANRDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYD--MVAPSGEGAVRCMQMALATVD--T-PIDYINTH 297 (406)
T ss_pred CCCCceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCC--CCCCCHHHHHHHHHHHHhCCC--C-CccEEEcC
Confidence 999999999999999999999999999999999999999999986 578899999999999998654 5 99999999
Q ss_pred CCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396 420 GTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS 499 (829)
Q Consensus 420 gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~ 499 (829)
||||+.+|.+|..||.++|+. ..++|+++|+++||+++|||+.++++++++|++++|||++|+++++|.+. ..
T Consensus 298 gtGT~~~D~~E~~Ai~~~fg~-----~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~--~~ 370 (406)
T PRK07967 298 GTSTPVGDVKELGAIREVFGD-----KSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAA--GM 370 (406)
T ss_pred CCCCCCCCHHHHHHHHHHhCC-----CCCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCcccc--CC
Confidence 999999999999999999974 23689999999999999999999999999999999999999999999773 11
Q ss_pred CeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
+ +..+..+| ..++++++|||||||+|+|+||+++
T Consensus 371 ~--~~~~~~~~----~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 371 P--IVTETTDN----AELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred C--ccCCCCcC----CCCCEEEEecccCCCeeEEEEEEec
Confidence 1 22222222 3578999999999999999999986
No 14
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=100.00 E-value=1.4e-65 Score=584.09 Aligned_cols=420 Identities=50% Similarity=0.893 Sum_probs=384.4
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|||||||+++|+|.++++||++|.+|+++++++|..||+...++ ++........+..++++++++.||+.+|+++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~ 79 (421)
T cd00833 1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYY-PDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPR 79 (421)
T ss_pred CCEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccc-cccccCCCcceecceecCCcccCCHhHcCCCHH
Confidence 4799999999999999999999999999999999998899877776 444455566777888999888899999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccC-ccccchhhhccccccchhhHhhhhccC
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITD-PKMYNAYALMGESVSILPARVSYFLNL 273 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~ia~~lgl 273 (829)
+++.|+++++|+++++++||+|||+++.+++..++|+++|+..++|...... ...+.++.+.+...+..++++++.+|+
T Consensus 80 ~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl 159 (421)
T cd00833 80 EAEAMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL 159 (421)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999998877554432 234567777777888899999999999
Q ss_pred CCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEE
Q psy11396 274 QGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGV 353 (829)
Q Consensus 274 ~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaa 353 (829)
+||+++++++|+|++.||..|+++|++|++|++||||+|.+..+.....+...+.+++...++|||.+++|+++|||+++
T Consensus 160 ~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaa 239 (421)
T cd00833 160 RGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGV 239 (421)
T ss_pred CCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEE
Confidence 99999999999999999999999999999999999999998888888899999999988889999999999999999999
Q ss_pred EEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHH
Q psy11396 354 LMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEA 433 (829)
Q Consensus 354 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~A 433 (829)
+||+++++|+++|+++|++|+|++.++++.+.....|+..++.+++++||+++|++++|||||++|||||+.+|..|.++
T Consensus 240 lvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~a 319 (421)
T cd00833 240 VVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEA 319 (421)
T ss_pred EEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHH
Confidence 99999999999999999999999999998776677888999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccccccccc
Q psy11396 434 LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIK 513 (829)
Q Consensus 434 l~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 513 (829)
|.++|+.......++++++.|+++||+.+|+|++++++++++|+++.+||++|+++|+|.++++..+++++++.++|+..
T Consensus 320 l~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (421)
T cd00833 320 LAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWPAP 399 (421)
T ss_pred HHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCcccCCeEeeCCCccCCCC
Confidence 99999864322346899999999999999999999999999999999999999999999999988899999999999532
Q ss_pred ccCccEEEEeccCCCCceEEEEe
Q psy11396 514 NKKKRMAAINSFGFSGTNAHIVL 536 (829)
Q Consensus 514 ~~~~~~a~v~s~G~gG~na~~vl 536 (829)
..++++++|||||||+|+|+||
T Consensus 400 -~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 400 -AGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred -CCCeEEEEeCcCCCCceeEEeC
Confidence 2689999999999999999986
No 15
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.8e-65 Score=576.12 Aligned_cols=392 Identities=28% Similarity=0.409 Sum_probs=346.7
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|+|||||+++|.|.++++||++|++|++++++++ ||+...+ .+...+.+ +.||+..| ++++
T Consensus 2 ~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~--~~~~~~~-----------~~~~~g~i---~~f~~~~~-~~~~ 64 (406)
T PRK08439 2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKIT--LFDASDF-----------PVQIAGEI---TDFDPTEV-MDPK 64 (406)
T ss_pred CCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCC--CccccCC-----------CCceeEEc---CCcChhhc-CCHH
Confidence 689999999999999999999999999999999875 3432222 12333444 34888887 8999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccchhhH
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSILPAR 266 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~ 266 (829)
+++.|++.++|++.++++||+|||+++.+++..++|+++|++.+.+... ...+..++++.++...++.++++
T Consensus 65 ~~~~~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 144 (406)
T PRK08439 65 EVKKADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGF 144 (406)
T ss_pred HHhhcCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHH
Confidence 9999999999999999999999999999999999999999876654321 12345677888888899999999
Q ss_pred hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----CCCCCCCCCCC
Q psy11396 267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQR 341 (829)
Q Consensus 267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----~~~~~~pfd~~ 341 (829)
|+..||++||++++.++|+|++.||..|+++|++|++|++||||+|..+++..+..|...+.++ ++..|+|||.+
T Consensus 145 is~~~gl~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~ 224 (406)
T PRK08439 145 ISIEHGLKGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKD 224 (406)
T ss_pred HHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999887 45689999999
Q ss_pred CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396 342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421 (829)
Q Consensus 342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt 421 (829)
++|+++|||++++|||++++|+++|++||++|.|++.+.|+.+ ++.|+..++.++|++||+++|+ +|||||++|||
T Consensus 225 ~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~--~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~hgt 300 (406)
T PRK08439 225 RDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANH--ITSPAPEGPLRAMKAALEMAGN--PKIDYINAHGT 300 (406)
T ss_pred CCcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCC--CCCCCHHHHHHHHHHHHHHcCC--CccCEEEccCC
Confidence 9999999999999999999999999999999999999988765 5667779999999999999999 79999999999
Q ss_pred CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF 501 (829)
Q Consensus 422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~ 501 (829)
||+.+|..|..||.++|+.. ...++|++.|+++||+++|+|++++++++++|++|+|||++|+++|+|+++++.
T Consensus 301 gt~~~D~~E~~al~~~f~~~---~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~--- 374 (406)
T PRK08439 301 STPYNDKNETAALKELFGSK---EKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDY--- 374 (406)
T ss_pred cCCCCCHHHHHHHHHHhccc---CCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCccc---
Confidence 99999999999999999853 234689999999999999999999999999999999999999999999987653
Q ss_pred eeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
++.+.++ ...+++++|||||||+|+|+||+.+
T Consensus 375 -~~~~~~~-----~~~~~~l~nsfgfGG~n~~lvl~~~ 406 (406)
T PRK08439 375 -IPNVARK-----AELNVVMSNSFGFGGTNGVVIFKKV 406 (406)
T ss_pred -CCCcccc-----CCCCEEEEeeecCCCceEEEEEecC
Confidence 3333333 3578999999999999999999853
No 16
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.5e-65 Score=574.41 Aligned_cols=389 Identities=24% Similarity=0.366 Sum_probs=335.6
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|||||||+++|.|.+.++||++|.+|+++++++|. |+... ...++.++.+++ ||+..+ ++++
T Consensus 2 ~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~--~~~~~----------~~~~~~~~~v~~---~~~~~~-~~~~ 65 (405)
T PRK09116 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPE--WDRYD----------GLNTRLAAPIDD---FELPAH-YTRK 65 (405)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCc--hhhcc----------CCCCceEEEecC---cChhHh-cCHH
Confidence 6899999999999999999999999999999999973 42110 112334455543 555443 6889
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCC-CCCCCCceEEEEcccccccccc--------ccCccccchhhhccccccchhh
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAGYNP-FSLSGSLCGVFVGCAVSDYNKL--------ITDPKMYNAYALMGESVSILPA 265 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~-~~i~~~~~Gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~ 265 (829)
+.+.||+.+++++.++++||+|||+.. ..+++.++||++|++.+..... ...+..++++.+...++|.+++
T Consensus 66 ~~r~~~~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~ 145 (405)
T PRK09116 66 KIRSMGRVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAV 145 (405)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHH
Confidence 999999999999999999999999954 3456789999999876643221 1234456777777888899999
Q ss_pred HhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-----CCCCCCCCCC
Q psy11396 266 RVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-----PDGHCYSFDQ 340 (829)
Q Consensus 266 ~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-----~~~~~~pfd~ 340 (829)
+|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|. ..+.....|..++.++ +...|+|||.
T Consensus 146 ~is~~~~~~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~ 224 (405)
T PRK09116 146 NVGLFFGLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTRNDAPELTPRPFDA 224 (405)
T ss_pred HHHHHhCCCCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccCCCCCCCCCCCCcC
Confidence 999999999999999999999999999999999999999999999998 4666666677766553 4568999999
Q ss_pred CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396 341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG 420 (829)
Q Consensus 341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg 420 (829)
+++|+++|||++++|||++++|+++|++||++|+|++.++|+.+ ++.|+..++.++|+++|++++++|+|||||++||
T Consensus 225 ~~~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~--~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~~Hg 302 (405)
T PRK09116 225 NRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAH--VTQPQAETMQIAMELALKDAGLAPEDIGYVNAHG 302 (405)
T ss_pred CCCCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCc--CCCCCHHHHHHHHHHHHHHhCCCHHHcCEEECcC
Confidence 99999999999999999999999999999999999999999875 5678889999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccC-CcCCC
Q psy11396 421 TGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHI-KLENS 499 (829)
Q Consensus 421 tgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~-~~~~~ 499 (829)
|||+.+|..|.+||.++|+. .+||++.|+++||++||+|++++++++++|++++|||++|+++|+|++ +++
T Consensus 303 tgt~~~D~~E~~Ai~~~fg~------~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~-- 374 (405)
T PRK09116 303 TATDRGDIAESQATAAVFGA------RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALD-- 374 (405)
T ss_pred ccCCCCCHHHHHHHHHHhCC------CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccC--
Confidence 99999999999999999974 378999999999999999999999999999999999999999999988 443
Q ss_pred CeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
++..+.++| +.+++++|||||||+|+++||+
T Consensus 375 --~v~~~~~~~-----~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 375 --YIMGEAREI-----DTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred --ccCCCCccC-----CCCEEEEeeecCCcccEEEEEC
Confidence 344555544 3578999999999999999984
No 17
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=100.00 E-value=1.7e-64 Score=572.25 Aligned_cols=394 Identities=30% Similarity=0.476 Sum_probs=347.0
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|+|||||+++|.|.+.++||++|.+|++++.+++ +|+...+ .....+.++ .||+.+| ++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~--~~~~~~~-----------~~~~~g~i~---~f~~~~~-~~~~ 63 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPIT--RFDASDL-----------PVKIAGEVK---DFDPEDY-IDKK 63 (407)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECC--cccccCC-----------CCcEEEEeC---CcChhhc-CCHH
Confidence 479999999999999999999999999999999986 3432222 123344444 4899988 9999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhhH
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPAR 266 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~ 266 (829)
+.+.|||+++|+++++++||+|||++++++++.++|+|+|++.+.+.... ..+..+.++.+.+...+.++++
T Consensus 64 ~~~~~~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 143 (407)
T TIGR03150 64 EARRMDRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQ 143 (407)
T ss_pred HHhhcCHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHH
Confidence 99999999999999999999999999999999999999998766542221 2234566777788888999999
Q ss_pred hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCC-----CCCCCCCCCC
Q psy11396 267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSP-----DGHCYSFDQR 341 (829)
Q Consensus 267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~-----~~~~~pfd~~ 341 (829)
+++.||++||+++|+++|+||+.||.+|+++|++|+||++||||+|.+.+|.....|...+.++. ...++|||.+
T Consensus 144 is~~~gl~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~ 223 (407)
T TIGR03150 144 ISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD 223 (407)
T ss_pred HHHHhCCCCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999988888888888764 3568999999
Q ss_pred CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396 342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421 (829)
Q Consensus 342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt 421 (829)
++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+.....|.+.++.+++++||+++|++|+||||||+|||
T Consensus 224 ~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~t 303 (407)
T TIGR03150 224 RDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGT 303 (407)
T ss_pred CCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCC
Confidence 99999999999999999999999999999999999999998765555666788999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF 501 (829)
Q Consensus 422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~ 501 (829)
||+.+|.+|..++.++|+.. ..+++|++.|+++||++||||++++++++++|++++|||++|+++|+|.++++.
T Consensus 304 gt~~~D~~E~~a~~~~~~~~---~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~--- 377 (407)
T TIGR03150 304 STPLGDKAETKAIKRVFGDH---AYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDY--- 377 (407)
T ss_pred CCCCCCHHHHHHHHHHhccC---CCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccc---
Confidence 99999999999999999853 235899999999999999999999999999999999999999999999887642
Q ss_pred eeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
++.+..+| +.+++++|||||||+|+|+||+
T Consensus 378 -v~~~~~~~-----~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 378 -VPNEARER-----KIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred -cCCCCccC-----CcCEEEEecccCCCceEEEEeC
Confidence 33344444 4689999999999999999984
No 18
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.5e-64 Score=553.50 Aligned_cols=394 Identities=28% Similarity=0.427 Sum_probs=344.6
Q ss_pred CCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396 114 NDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP 193 (829)
Q Consensus 114 ~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p 193 (829)
.++|+|||+|+++|.|.+.+++|++|..|++++..++ +|+...+. ++..+.+.+ | +.+ +++
T Consensus 2 ~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~--~~~~~~~~-----------~~~~~~i~~---~-~~~--~~~ 62 (412)
T COG0304 2 MRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPIT--RFDASGLG-----------VKIAGEIKD---L-DDQ--IAK 62 (412)
T ss_pred CceEEEecceeeecccCCHHHHHHHHhcCCCCCCccc--cccccCCC-----------Ccccccccc---c-ccc--cch
Confidence 4789999999999999999999999999999998875 34433331 223333333 3 122 577
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCC-ceEEEEccccccccccc--------cCccc-cchhhhccccccch
Q psy11396 194 SEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGS-LCGVFVGCAVSDYNKLI--------TDPKM-YNAYALMGESVSIL 263 (829)
Q Consensus 194 ~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~-~~Gv~~g~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~ 263 (829)
++.++||+.++|++.++.+||+|||+. ...... ++|+++|++.++..... ..... ++|+.++..+++..
T Consensus 63 ~~~~~~d~~~~~a~~Aa~eAl~dAgl~-~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 141 (412)
T COG0304 63 KERRFMDRFSQLAVVAAVEALEDAGLD-NELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLA 141 (412)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHcCCC-cccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchH
Confidence 888899999999999999999999998 233222 89999999987765332 22333 78999999999999
Q ss_pred hhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCC-----CCCCCC
Q psy11396 264 PARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPD-----GHCYSF 338 (829)
Q Consensus 264 a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~-----~~~~pf 338 (829)
++.++..+|++||++++.++|+||..||..|+++|+.|++|++||||+|...++.....|..++.++.+ ..||||
T Consensus 142 a~~vs~~~g~~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPf 221 (412)
T COG0304 142 AGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPF 221 (412)
T ss_pred HHHHHHHhCCCCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998854 589999
Q ss_pred CCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy11396 339 DQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEA 418 (829)
Q Consensus 339 d~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~ 418 (829)
|++++||++|||++++|||++|+|++||++||++|.|++.+.|++|.+.+.|.+++..++|+.||++||++|+|||||.+
T Consensus 222 d~~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYina 301 (412)
T COG0304 222 DKNRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINA 301 (412)
T ss_pred CCCCCCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeC
Confidence 99999999999999999999999999999999999999999999998888888999999999999999999999999999
Q ss_pred cCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCcc-CCcC
Q psy11396 419 HGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH-IKLE 497 (829)
Q Consensus 419 hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~-~~~~ 497 (829)
|||+|+.+|..|..||+++|+.... .++|.|.|+.+||++||+|+.+++.++++|++|.+||++|+++|+|+ ++++
T Consensus 302 HgTsT~~nD~~E~~ai~~vfg~~~~---~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~~l~ 378 (412)
T COG0304 302 HGTSTPANDKAESLAIKRVFGEHAK---SLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAADLD 378 (412)
T ss_pred CCccCCCccHHHHHHHHHHhccccc---CceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCccccccc
Confidence 9999999999999999999996433 38899999999999999999999999999999999999999999985 2222
Q ss_pred CCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 498 NSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 498 ~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
+++.+.++ ...++++.|||||||+|+.+|+..+
T Consensus 379 ----~v~~~~~~-----~~~~~~lsnsfGFGG~Na~lv~~~~ 411 (412)
T COG0304 379 ----VVPNEART-----GAVRAALSNSFGFGGTNASLVFKRY 411 (412)
T ss_pred ----ccCCcccc-----cceeEEEecccccCCcceEEEEecC
Confidence 34444332 2378999999999999999999865
No 19
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=100.00 E-value=1.7e-63 Score=562.83 Aligned_cols=401 Identities=25% Similarity=0.376 Sum_probs=346.1
Q ss_pred cccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCc---cccccCcceeecccccCcccccCCcCCCCCHHHhhcCC
Q psy11396 124 GQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDS---DKNAIGKTICKKMGSLEDIEIFDPLFFNISPSEAEYMD 200 (829)
Q Consensus 124 ~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~~~~~~d 200 (829)
+++|.|.++++||++|.+|+++++++|..+|+...+++. .........++.+++++.. .||+.+|+..+ ..+
T Consensus 1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~-~f~~~~~~~~~----~~~ 75 (421)
T PTZ00050 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQS-EFDPSDFAPTK----RES 75 (421)
T ss_pred CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCcc-cCChhHcCCcc----cCC
Confidence 478999999999999999999999999877655443321 1111233445667777553 58888876544 359
Q ss_pred HHHHHHHHHHHHHHHHcCCC-CCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhhHhhhhc
Q psy11396 201 PQQRLFLQNCWTCIEDAGYN-PFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPARVSYFL 271 (829)
Q Consensus 201 ~~~~l~l~aa~~AL~dAGl~-~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~ia~~l 271 (829)
++++|++.++++||+|||++ +..++..++|+++|++.+.+.... .....++++.+++...+.++++|++.|
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 99999999999999999998 788888999999999876653221 234566788899999999999999999
Q ss_pred cCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC------CCCCCCCCCCCCCCc
Q psy11396 272 NLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANGF 345 (829)
Q Consensus 272 gl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls------~~~~~~pfd~~~~G~ 345 (829)
|++||+++|+++|+||+.||.+|+++|++|+||++||||+|.+.+|..+..|...+.++ ++..|+|||.+++|+
T Consensus 156 ~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~G~ 235 (421)
T PTZ00050 156 KLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGF 235 (421)
T ss_pred CCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCCCE
Confidence 99999999999999999999999999999999999999999988998888898888775 446899999999999
Q ss_pred ccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCC
Q psy11396 346 VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKK-FNINPNDIQLLEAHGTGTK 424 (829)
Q Consensus 346 ~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~-Agl~~~dId~ve~hgtgt~ 424 (829)
++||||+++|||++++|+++|++||++|+|++.++|+.+...+.|++.++.++|++||++ ||++|+||||||+|||||+
T Consensus 236 ~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~ 315 (421)
T PTZ00050 236 VMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATSTP 315 (421)
T ss_pred eeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccCC
Confidence 999999999999999999999999999999999999988777778889999999999999 9999999999999999999
Q ss_pred CCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeec
Q psy11396 425 LGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFIN 504 (829)
Q Consensus 425 ~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~ 504 (829)
++|.+|.+++.++|+... ..+++|++.|+++||++||||++++++++++|++++|||++|+++|+|.++++ +.
T Consensus 316 ~~D~~E~~al~~~~~~~~--~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~-----~~ 388 (421)
T PTZ00050 316 IGDKIELKAIKKVFGDSG--APKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLN-----LV 388 (421)
T ss_pred CCCHHHHHHHHHHhcccc--CCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCcc-----cc
Confidence 999999999999998532 14689999999999999999999999999999999999999999999988743 22
Q ss_pred cccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 505 TKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 505 ~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
....+|+ ....+++++|||||||+|+|+||+.
T Consensus 389 ~~~~~~~--~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 389 QGKTAHP--LQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred CCcccCc--CCCCCEEEEeeecCCCeeEEEEEeC
Confidence 3333342 1257899999999999999999985
No 20
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=100.00 E-value=2.9e-63 Score=561.86 Aligned_cols=388 Identities=27% Similarity=0.384 Sum_probs=341.1
Q ss_pred CCEEEEecccccCCCCC---HHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCC
Q psy11396 115 DDIAIIGISGQFPKANN---VKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNI 191 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~---~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i 191 (829)
.+|||||||+++|.|.+ .++||++|.+|++++++++..+ .. ......|.+++ |+ +
T Consensus 1 ~~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~---~~-----------~~~~~~g~i~~---~~-----~ 58 (407)
T cd00828 1 SRVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK---SR-----------FDRGVAGQIPT---GD-----I 58 (407)
T ss_pred CCEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc---cc-----------CCccEEEEccC---CC-----c
Confidence 37999999999999999 9999999999999999987533 11 11233444443 44 6
Q ss_pred CHHHhhcC---CHHHHHHHHHHHHHHHHcCCCCCC-CCCCceEEEEccccccccccccC----ccccchhhhccccc--c
Q psy11396 192 SPSEAEYM---DPQQRLFLQNCWTCIEDAGYNPFS-LSGSLCGVFVGCAVSDYNKLITD----PKMYNAYALMGESV--S 261 (829)
Q Consensus 192 ~p~~~~~~---d~~~~l~l~aa~~AL~dAGl~~~~-i~~~~~Gv~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~--~ 261 (829)
++++++++ ||+++|+++++++||+|||+++++ ++..++|+++|++.+++...... .+...++.++.... +
T Consensus 59 ~~~~~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (407)
T cd00828 59 PGWDAKRTGIVDRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPN 138 (407)
T ss_pred CHHHHHhccCCCHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccc
Confidence 78888888 999999999999999999999888 88999999999987765433221 12345666666666 8
Q ss_pred chhhHhhhhccC-CCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCC-----CCC
Q psy11396 262 ILPARVSYFLNL-QGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPD-----GHC 335 (829)
Q Consensus 262 ~~a~~ia~~lgl-~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~-----~~~ 335 (829)
.++++|++.||+ +||+++|+++|+|++.||..|+++|++|+||++||||+|.+. +.....|..++.++.+ ..|
T Consensus 139 ~~a~~is~~~gl~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~~~~~~~~~ 217 (407)
T cd00828 139 TVAGWVNILLLSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTAEEEPEEMS 217 (407)
T ss_pred hHHHHHHHHhCcCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCCCCCCCccc
Confidence 999999999999 999999999999999999999999999999999999999988 8888899999999854 689
Q ss_pred CCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccE
Q psy11396 336 YSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQL 415 (829)
Q Consensus 336 ~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ 415 (829)
+|||.+++|+++||||+++|||++++|+++|++||++|.|++.++|+.+..... +..++.++|++||++||++|+||||
T Consensus 218 ~pfd~~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~ 296 (407)
T cd00828 218 RPFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDV 296 (407)
T ss_pred CCCcCCCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCE
Confidence 999999999999999999999999999999999999999999999988765544 7889999999999999999999999
Q ss_pred EEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCC
Q psy11396 416 LEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK 495 (829)
Q Consensus 416 ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~ 495 (829)
||+|||||+.+|..|.+++.++|+... .+++|+++|+++||+++|+|++++++++++|+++++||++|+++|+|.++
T Consensus 297 i~~hgtgt~~~D~~E~~ai~~~~~~~~---~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~ 373 (407)
T cd00828 297 ISAHGTSTPANDVAESRAIAEVAGALG---APLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVE 373 (407)
T ss_pred EecccccCccccHHHHHHHHHHHhccC---CCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCcccc
Confidence 999999999999999999999998643 45899999999999999999999999999999999999999999999884
Q ss_pred cCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEe
Q psy11396 496 LENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536 (829)
Q Consensus 496 ~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl 536 (829)
+ .++.++.++|+.. ++++++|||||||+|+|+||
T Consensus 374 ~----~~~~~~~~~~~~~---~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 374 H----LSVVGLSRDLNLK---VRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred c----ccccCcCccCCCC---ccEEEEecccCCCcceEEEC
Confidence 3 4567788888432 68999999999999999986
No 21
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=100.00 E-value=6.6e-63 Score=559.36 Aligned_cols=393 Identities=30% Similarity=0.477 Sum_probs=349.5
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|+|||||+++|+|.+.++||++|++|++++++++..++ .. .....++.+++ ||+. |.++++
T Consensus 1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~--~~-----------~~~~~~~~i~~---~~~~-~~~~~~ 63 (406)
T cd00834 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDA--SG-----------FPSRIAGEVPD---FDPE-DYLDRK 63 (406)
T ss_pred CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCcccc--cC-----------CCccEEEEcCC---CChh-hcCCHH
Confidence 4799999999999999999999999999999999875432 11 12334555554 6665 679999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhhH
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPAR 266 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~ 266 (829)
+++.|||+++|+++++++||+|||+++.+++..++|+++|++.+++.... ..+..++++.+.+...+.++++
T Consensus 64 ~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 143 (406)
T cd00834 64 ELRRMDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQ 143 (406)
T ss_pred HhccCCHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHH
Confidence 99999999999999999999999999999999999999999887653222 2234566777777788889999
Q ss_pred hhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCC-----CCCCCCCCC
Q psy11396 267 VSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPD-----GHCYSFDQR 341 (829)
Q Consensus 267 ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~-----~~~~pfd~~ 341 (829)
|+..||++||+++|+++|+|++.||..|+++|++|+||++||||+|.+..|..+..|...+.++.+ ..++|||.+
T Consensus 144 ia~~lgl~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~ 223 (406)
T cd00834 144 VAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKD 223 (406)
T ss_pred HHHHhCCCCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999889999999999998865 478999999
Q ss_pred CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396 342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421 (829)
Q Consensus 342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt 421 (829)
++|+++||||+++||++.++|+++|+++|++|+|++.++++.+.....|...++.++++++|+++|++++|||||++|||
T Consensus 224 ~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~t 303 (406)
T cd00834 224 RDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGT 303 (406)
T ss_pred CCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccc
Confidence 99999999999999999999999999999999999999998876666666899999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF 501 (829)
Q Consensus 422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~ 501 (829)
||+.+|..|.+++.++|+.. .++++|++.|+++||+++|||++++++++++|+++++||++|+++|+|..+++
T Consensus 304 gt~~~d~~E~~al~~~~~~~---~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~---- 376 (406)
T cd00834 304 STPLNDAAESKAIKRVFGEH---AKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLD---- 376 (406)
T ss_pred cCccccHHHHHHHHHHhccc---CCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcc----
Confidence 99999999999999999853 34689999999999999999999999999999999999999999999866543
Q ss_pred eeccccccccccccCccEEEEeccCCCCceEEEEe
Q psy11396 502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVL 536 (829)
Q Consensus 502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl 536 (829)
+++.+.++|+ .|+++||||||||+|+|+||
T Consensus 377 ~~~~~~~~~~-----~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 377 YVPNEAREAP-----IRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred ccCCCCcccc-----ccEEEEeeecCCceeeEEEC
Confidence 3446778884 38999999999999999996
No 22
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=100.00 E-value=3.4e-62 Score=550.24 Aligned_cols=394 Identities=21% Similarity=0.336 Sum_probs=330.3
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|||||||+++|.|.++++||++|.+|++++++++..++. .++....+...+..++.+++ |++..+ ++++
T Consensus 2 ~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~ 72 (410)
T PRK07103 2 DEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQ-----VPDDAGAGLASAFIGAELDS---LALPER-LDAK 72 (410)
T ss_pred CCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCccccc-----ccccccccCCCceEEEEeCC---CChhhc-CCHH
Confidence 68999999999999999999999999999999998753221 11111111222334555554 444333 7888
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccc-------cccCccccchhhhccccccchhhHh
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNK-------LITDPKMYNAYALMGESVSILPARV 267 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~i 267 (829)
..+.|++.++|++.++++||+|||++ ..+..++|||+|++...... ....+..+.|+.....+++.++++|
T Consensus 73 ~~r~~~~~~~lal~Aa~eAl~dAgl~--~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i 150 (410)
T PRK07103 73 LLRRASLSAQAALAAAREAWRDAALG--PVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLC 150 (410)
T ss_pred HhhcCCHHHHHHHHHHHHHHHhcCcC--CCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHH
Confidence 89999999999999999999999995 45678999999976533211 1123344566666667778899999
Q ss_pred hhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC-------CCCCCCCCCC
Q psy11396 268 SYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS-------PDGHCYSFDQ 340 (829)
Q Consensus 268 a~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls-------~~~~~~pfd~ 340 (829)
++.||++||+++++++|+|++.||..|+++|++|+||++||+|++...++.....|..++.++ +...|+|||.
T Consensus 151 a~~lgl~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~ 230 (410)
T PRK07103 151 SEQFGIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQ 230 (410)
T ss_pred HHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCC
Confidence 999999999999999999999999999999999999999999999888898888888888764 4568999999
Q ss_pred CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396 341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG 420 (829)
Q Consensus 341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg 420 (829)
+++|+++|||++++||+++++|+++|++||++|+|++.++|+.+ .+.|+..++.+++++||+++|++|+|||||++||
T Consensus 231 ~~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~--~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hg 308 (410)
T PRK07103 231 DRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANR--GPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHG 308 (410)
T ss_pred CCCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCC--CCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccC
Confidence 99999999999999999999999999999999999999999877 5678889999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCC-CccCCcCCC
Q psy11396 421 TGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNIL-NEHIKLENS 499 (829)
Q Consensus 421 tgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~-~~~~~~~~~ 499 (829)
|||+.+|..|.++| |+. ...++||++.|+++||+.+|||++++++++++|++++|||++|+++| ++.++|
T Consensus 309 tgt~~~D~~E~~al---~~~---~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~--- 379 (410)
T PRK07103 309 TGSPLGDETELAAL---FAS---GLAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRW--- 379 (410)
T ss_pred CCCCCCCHHHHHHH---hcC---CCCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcCc---
Confidence 99999999999999 332 12358999999999999999999999999999999999999999987 555432
Q ss_pred CeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
+..+. .....+++++|||||||+|+|+||++
T Consensus 380 ---v~~~~-----~~~~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 380 ---VGSTA-----ESARIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred ---cCCCC-----cCCCCCEEEEecccCCCceEEEEEeC
Confidence 22221 22357899999999999999999974
No 23
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=7.5e-62 Score=537.99 Aligned_cols=368 Identities=26% Similarity=0.385 Sum_probs=314.2
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|||||||+++|.|. .++||++|.+|+++|.+++. |+ . .+. |....++..+
T Consensus 2 ~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~--~~--~----~~~------------------~~~~~~~~~~- 53 (381)
T PRK05952 2 MKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQP--FP--E----LPP------------------LPLGLIGNQP- 53 (381)
T ss_pred CeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCc--cc--c----ccc------------------ccceeecccc-
Confidence 5899999999999999 99999999999999998763 21 0 000 0000000111
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEcccccccccccc--------C---ccccchhhhccccccch
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLIT--------D---PKMYNAYALMGESVSIL 263 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~ 263 (829)
..++ +++..++++||+|||+++. ..++||++|++.+....... . ...+.+..+...++|.+
T Consensus 54 --~~~~---~~~~~a~~~Al~dagl~~~---~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 125 (381)
T PRK05952 54 --SSLE---DLTKTVVTAALKDAGLTPP---LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQA 125 (381)
T ss_pred --cccc---HHHHHHHHHHHHhcCCCCC---CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHH
Confidence 1133 3556889999999999753 36899999998664322111 1 12456777888899999
Q ss_pred hhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC
Q psy11396 264 PARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN 343 (829)
Q Consensus 264 a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~ 343 (829)
++++++.||++||++++.++|+|++.||..|+++|++|++|++||||+|...++..+..|..++.++.+ .|+|||.+++
T Consensus 126 a~~ia~~~~~~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~rPfd~~r~ 204 (381)
T PRK05952 126 AIAAARQIGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKT-GAYPFDRQRE 204 (381)
T ss_pred HHHHHHHhCCCCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCC-CCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999998899999999999999875 5999999999
Q ss_pred CcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy11396 344 GFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGT 423 (829)
Q Consensus 344 G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt 423 (829)
|+++|||++++|||++++|+++|++||++|+|++.++|+.+...+.|+..++.++|++||+++|++|+||||||+|||||
T Consensus 205 G~v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt 284 (381)
T PRK05952 205 GLVLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTAT 284 (381)
T ss_pred CccccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCC
Confidence 99999999999999999999999999999999999999988777788899999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeee
Q psy11396 424 KLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFI 503 (829)
Q Consensus 424 ~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v 503 (829)
+.+|.+|.++|.++|+. .++|++.|+++||+++|+|++++++++++|++++|||++|+++|++.+++.
T Consensus 285 ~~~D~~E~~al~~~fg~------~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v------ 352 (381)
T PRK05952 285 RLNDQREANLIQALFPH------RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFV------ 352 (381)
T ss_pred CCCcHHHHHHHHHHcCC------CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcC------
Confidence 99999999999999963 379999999999999999999999999999999999999999886654432
Q ss_pred ccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 504 NTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 504 ~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
.+. .....+++++|||||||+|+++||+
T Consensus 353 -~~~-----~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 353 -RQA-----QQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred -CCc-----ccCCCCEEEEeeecCCCeeEEEEEe
Confidence 111 2235789999999999999999996
No 24
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2.2e-59 Score=528.93 Aligned_cols=393 Identities=23% Similarity=0.332 Sum_probs=326.5
Q ss_pred CCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCC
Q psy11396 113 NNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNIS 192 (829)
Q Consensus 113 ~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~ 192 (829)
.+.+|+|||||+++|.|.+.++||++|++|++++++++ +|+...+ .++..|.++ .|++
T Consensus 9 ~~~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~--~~~~~~~-----------~~~~~g~~~---~~~~------ 66 (425)
T PRK06501 9 GRPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTIT--RFPTEGL-----------RTRIAGTVD---FLPE------ 66 (425)
T ss_pred CCcCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCC--cccccCC-----------CCceEEEEe---eccc------
Confidence 45689999999999999999999999999999999875 4432221 123344432 1222
Q ss_pred HHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCC--------------CCceEEEEcccccc---cccccc-Cccccchhh
Q psy11396 193 PSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLS--------------GSLCGVFVGCAVSD---YNKLIT-DPKMYNAYA 254 (829)
Q Consensus 193 p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~--------------~~~~Gv~~g~~~~~---~~~~~~-~~~~~~~~~ 254 (829)
.....+++.+++++.++++||+|||++..++. +.+++++.++.... |..+.. ......+..
T Consensus 67 -~~~~~~~~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (425)
T PRK06501 67 -SPFGASALSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDAL 145 (425)
T ss_pred -ccccccCHHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChh
Confidence 12234677889999999999999999643322 45778877765432 222211 111122233
Q ss_pred hccccccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC----
Q psy11396 255 LMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS---- 330 (829)
Q Consensus 255 ~~~~~~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls---- 330 (829)
+.....+.++++|+..||++||+++|+++|+|++.||.+|+++|++|++|++||||+|...++..+..|..++.++
T Consensus 146 ~~~~~~~~~a~~i~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~ 225 (425)
T PRK06501 146 HERFQFGSIADRLADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQND 225 (425)
T ss_pred hhhhcccHHHHHHHHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCC
Confidence 4555667889999999999999999999999999999999999999999999999999888999988998888876
Q ss_pred -CCCCCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy11396 331 -PDGHCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNIN 409 (829)
Q Consensus 331 -~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~ 409 (829)
++..|+|||.+++|+++|||++++|||+.++|+++|++||++|.|++.++|+.+.....|+...+.++|++||+++|++
T Consensus 226 ~~~~~~rpfd~~r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~ 305 (425)
T PRK06501 226 PPEKASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLT 305 (425)
T ss_pred CCCcccCCCCCCCCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4568999999999999999999999999999999999999999999999998887777788889999999999999999
Q ss_pred CCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCC
Q psy11396 410 PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNI 489 (829)
Q Consensus 410 ~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~ 489 (829)
|+|||||++|||||+.+|..|..+|.++|+. ..+.+||++.|+++||+.+|||++++++++++|++|+|||++|+++
T Consensus 306 p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~---~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~ 382 (425)
T PRK06501 306 PEQIDYINAHGTSTPENDKMEYLGLSAVFGE---RLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDN 382 (425)
T ss_pred HHHcCEEEecCccCcchHHHHHHHHHHHhcc---cCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCC
Confidence 9999999999999999999999999999974 2345899999999999999999999999999999999999999999
Q ss_pred CCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeecc
Q psy11396 490 LNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKI 540 (829)
Q Consensus 490 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~ 540 (829)
|+|+++++.. +...+ ..+.+++++|||||||+|+|+||+++|
T Consensus 383 ~~~~~~~~~~----~~~~~-----~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 383 PDPAIPLDVV----PNVAR-----DARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred CCCCCCcccC----CCccc-----CCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 9999976532 22222 235789999999999999999999876
No 25
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=100.00 E-value=5.3e-59 Score=506.76 Aligned_cols=325 Identities=26% Similarity=0.375 Sum_probs=294.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------cCccccchhhhccccccchhhHhhhh
Q psy11396 199 MDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------TDPKMYNAYALMGESVSILPARVSYF 270 (829)
Q Consensus 199 ~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~ia~~ 270 (829)
|++.+++++.++++|++|||+. .++.++||++|++.+.+..+. ..+..++|+.++..++|.++++|++.
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~---~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~ 77 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNT---EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIK 77 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC---CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHH
Confidence 5788999999999999999986 456789999999877653221 24567789999999999999999999
Q ss_pred ccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC------CCCCCCCCCCCCCC
Q psy11396 271 LNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS------PDGHCYSFDQRANG 344 (829)
Q Consensus 271 lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls------~~~~~~pfd~~~~G 344 (829)
||++||+++++++|+|++.||..|+++|++|++|++||||+|...++..+..|..++.++ ++..|+|||.+++|
T Consensus 78 ~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G 157 (342)
T PRK14691 78 HHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDG 157 (342)
T ss_pred hCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999888899988886 55789999999999
Q ss_pred cccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy11396 345 FVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK 424 (829)
Q Consensus 345 ~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~ 424 (829)
+++||||+++|||++++|+++|++||++|+|++.++|+.+...+.|++.++.++|++||+++|++|+||||||+|||||+
T Consensus 158 ~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~ 237 (342)
T PRK14691 158 FVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTP 237 (342)
T ss_pred ccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCc
Confidence 99999999999999999999999999999999999999877667888999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-cCCCCeee
Q psy11396 425 LGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIK-LENSPFFI 503 (829)
Q Consensus 425 ~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~-~~~~~~~v 503 (829)
.+|++|..||.++|+.. ..+||+++|+++||+++|||+++++.++++|++++|||++|+++|+|.++ ++ ++
T Consensus 238 ~~D~~E~~Ai~~~fg~~----~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~----~v 309 (342)
T PRK14691 238 VGDLGEINAIKHLFGES----NALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLN----II 309 (342)
T ss_pred CCCHHHHHHHHHHhCCC----CCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccC----cc
Confidence 99999999999999852 35899999999999999999999999999999999999999999999873 22 23
Q ss_pred ccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 504 NTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 504 ~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
..+.++| +.+++++|||||||+|+|+||+.+
T Consensus 310 ~~~~~~~-----~~~~al~nsfgfGG~n~~lvl~~~ 340 (342)
T PRK14691 310 AGNAQPH-----DMTYALSNGFGFAGVNASILLKRW 340 (342)
T ss_pred cCCCccC-----CCCEEEEeCccCCCeeEEEEEeec
Confidence 4444333 478999999999999999999976
No 26
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.1e-57 Score=506.21 Aligned_cols=369 Identities=18% Similarity=0.220 Sum_probs=306.4
Q ss_pred CCCCCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCC
Q psy11396 112 INNDDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNI 191 (829)
Q Consensus 112 ~~~~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i 191 (829)
+..++|||||||+++|.|.++++||++|.+|+++ ..++..+|.. + ... ...+ +|...+ +
T Consensus 3 ~~~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~~--~-----------~~~---~~~~---~~~~~~-~ 61 (398)
T PRK06519 3 MQPNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFAP--Y-----------PVH---PLPE---IDWSQQ-I 61 (398)
T ss_pred CCCCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCcccccC--c-----------Ccc---cccc---cChhhc-C
Confidence 3467999999999999999999999999999997 2222111110 0 001 1122 122222 4
Q ss_pred CHH-HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc--------------------cCcccc
Q psy11396 192 SPS-EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI--------------------TDPKMY 250 (829)
Q Consensus 192 ~p~-~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~--------------------~~~~~~ 250 (829)
+++ ..++||+.+++++.++++||+|||++....+..++||++|++.+...... ..+..+
T Consensus 62 ~~~~~~r~~~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (398)
T PRK06519 62 PKRGDQRQMETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTEL 141 (398)
T ss_pred CchhhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCcc
Confidence 555 67899999999999999999999997666666799999999876532211 123457
Q ss_pred chhhhccccccchhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCC
Q psy11396 251 NAYALMGESVSILPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLS 330 (829)
Q Consensus 251 ~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls 330 (829)
+|+.++..++|.++++|++.||++||+++|+++|+||+.||.+|+++|++|+||++||||+|...++..+..|...+.++
T Consensus 142 ~p~~~~~~~~n~~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls 221 (398)
T PRK06519 142 RPTLFLAQLSNLLAGNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLL 221 (398)
T ss_pred ChhhhhhhhhhHHHHHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccC
Confidence 88899999999999999999999999999999999999999999999999999999999999988998888999999987
Q ss_pred CCCCCCC-CCC---CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHc
Q psy11396 331 PDGHCYS-FDQ---RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKF 406 (829)
Q Consensus 331 ~~~~~~p-fd~---~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~A 406 (829)
.. .++| ||. +++||++|||++++|||++++|++||++|||+|.|++...++ .+..++.++|++||++|
T Consensus 222 ~~-~~~p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~~-------~~~~~~~~am~~AL~~A 293 (398)
T PRK06519 222 KG-GWAPVWSRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRAR-------RAPGDLEASLERLLKPA 293 (398)
T ss_pred CC-CCCchhccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCCC-------CChHHHHHHHHHHHHHC
Confidence 64 4555 666 699999999999999999999999999999999999643221 13457899999999999
Q ss_pred CCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCC
Q psy11396 407 NINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTIN 486 (829)
Q Consensus 407 gl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~ 486 (829)
|+ |+|||||++|||||+.+|..|.+||.++|+ .||+|+|+++||+++|+|+++++.++++|++|+|||++|
T Consensus 294 gl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~--------~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n 364 (398)
T PRK06519 294 GG-LAAPTAVISGATGAHPATAEEKAALEAALA--------GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFD 364 (398)
T ss_pred CC-cccCCEEEeCCCCCCCccHHHHHHHHHHcC--------CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCC
Confidence 99 899999999999999999999999999995 479999999999999999999999999999999999999
Q ss_pred CCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 487 YNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 487 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
+ +|+. +.....+.++|+++|++|.-.-.++|.
T Consensus 365 ~---~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 365 A---SGEK-----------------PMSGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred C---Cccc-----------------CccccccEEEEEeeccCCcceeEEEEe
Confidence 7 2221 123456889999999999777666654
No 27
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=100.00 E-value=9.3e-56 Score=495.14 Aligned_cols=378 Identities=22% Similarity=0.297 Sum_probs=311.9
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCC-CceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGR-NCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISP 193 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~-~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p 193 (829)
++|||||+|+++|.|.+.++||++|++|+ +++++++. |+ .. .....+.+++ |+. ..+++
T Consensus 2 ~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~--~~------~~-------~~~~~g~~~~---~~~--~~~~~ 61 (392)
T PRK09185 2 TPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDF--WL------VD-------LPTWVGEVVG---VEL--PALPA 61 (392)
T ss_pred CcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcc--cc------cc-------CCeEEEEecC---ccc--ccCCH
Confidence 58999999999999999999999999999 99998752 21 00 0011122332 442 12677
Q ss_pred HHhhcCCHHHHHHHHHHHH---HHHHcCCCCCCCCCCceEEEEccccccccccc-------cCc-cccchhhhccccccc
Q psy11396 194 SEAEYMDPQQRLFLQNCWT---CIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI-------TDP-KMYNAYALMGESVSI 262 (829)
Q Consensus 194 ~~~~~~d~~~~l~l~aa~~---AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~ 262 (829)
+..+.+++..+++..++.+ |+.|++ .+.+..++||++|++.+...... ... ....++.++....+.
T Consensus 62 ~~~~~~~~~~~~~~~a~~~~~~a~~~~~---~~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (392)
T PRK09185 62 ALAAFDCRNNRLALLALQQIEPAVEAAI---ARYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGS 138 (392)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHhhc---ccCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccH
Confidence 7788889888888777666 555554 34566789999998876432221 111 112345566677888
Q ss_pred hhhHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCC
Q psy11396 263 LPARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRA 342 (829)
Q Consensus 263 ~a~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~ 342 (829)
++++|++.||++||+++++++|+|++.||.+|+++|++|+||++||||+|.. .+.....|...+.++. ..|+|||.++
T Consensus 139 ~a~~ia~~lgl~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~-~~~~~~~~~~~~~l~~-~~~~Pfd~~~ 216 (392)
T PRK09185 139 LADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSL-CRLTLNGFNSLESLSP-QPCRPFSANR 216 (392)
T ss_pred HHHHHHHHhCCCCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeecccc-ChHHHHHHHhccccCC-CccCCCcCCC
Confidence 9999999999999999999999999999999999999999999999999974 5566677888887764 6799999999
Q ss_pred CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396 343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG 422 (829)
Q Consensus 343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg 422 (829)
+|+++|||++++||+++ ++.+ ++|.|++.++|+.+...+.|...++.+++++||++||++|+|||||++||||
T Consensus 217 ~G~~~gEGaa~vVLe~~-----~~~~--~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtg 289 (392)
T PRK09185 217 DGINIGEAAAFFLLERE-----DDAA--VALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTA 289 (392)
T ss_pred CccceeceEEEEEEEEc-----CCCc--EEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCC
Confidence 99999999999999987 2333 4799999999998877777888899999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396 423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF 502 (829)
Q Consensus 423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~ 502 (829)
|+.+|..|..||.++|+. .+||++.|+++||+++|||++++++++++|++|++||++|+++|+|.++++ +
T Consensus 290 t~~~D~~E~~al~~~f~~------~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~----~ 359 (392)
T PRK09185 290 TPLNDAMESRAVAAVFGD------GVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPL----Y 359 (392)
T ss_pred CcCCCHHHHHHHHHHhCC------CCceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc----c
Confidence 999999999999999974 257999999999999999999999999999999999999999999998753 3
Q ss_pred eccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
+..+.++| .++++++|||||||+|+|+||+..
T Consensus 360 ~~~~~~~~-----~~~~~l~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 360 LVENAQAL-----AIRYVLSNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred cCCCCccC-----CCCEEEEeCccCCceeEEEEEEeC
Confidence 44454444 378999999999999999999864
No 28
>KOG1680|consensus
Probab=100.00 E-value=7.9e-42 Score=341.54 Aligned_cols=240 Identities=22% Similarity=0.278 Sum_probs=214.9
Q ss_pred eEEeccccchhhHHHHHHHHhhhcccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc
Q psy11396 557 MVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR 636 (829)
Q Consensus 557 ~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~ 636 (829)
.+-.|.-|+|+++ |+++..++.+|.++|..++.|+++.++|+||.|+.||+|.|+.++.....+.-.
T Consensus 46 ~I~lItlNRP~~~-------------Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~~~~~ 112 (290)
T KOG1680|consen 46 GIALITLNRPKAL-------------NALCRATMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEFQDVS 112 (290)
T ss_pred CeEEEEeCChHHh-------------ccccHHHHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhccccccc
Confidence 4555666777765 556778899999999999999999999999999999999999998763332221
Q ss_pred -ccccccccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHH
Q psy11396 637 -FTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREIL 715 (829)
Q Consensus 637 -~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~l 715 (829)
......+..+..++||+||+|||+|+|||++|+++||+||++++++|++++.++|++|.+|++++|+|.||.++|+|++
T Consensus 113 ~~~~~~~~~~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s~Ale~~ 192 (290)
T KOG1680|consen 113 DGIFLRVWDLVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKSRALEMI 192 (290)
T ss_pred cccccchhhhhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChHHHHHHH
Confidence 1123333344459999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChH
Q psy11396 716 FTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPS 795 (829)
Q Consensus 716 l~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 795 (829)
+||++++++||+++||||+|||.+++.+++.+|+++|++.||.+++..|+.++..++..+.+.+..|...+...+ ..++
T Consensus 193 ltg~~~~AqeA~~~GlVn~Vvp~~~~l~eAv~l~~~Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~-~~~d 271 (290)
T KOG1680|consen 193 LTGRRLGAQEAKKIGLVNKVVPSGDALGEAVKLAEQIAKNSPLVVRADKESVNAAYETTLFEGLELERDLFGSTF-ATED 271 (290)
T ss_pred HhcCcccHHHHHhCCceeEeecchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhh-hhHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 7889
Q ss_pred HHHHHHHHHhhcccc
Q psy11396 796 VITNIERYFDKSIKK 810 (829)
Q Consensus 796 ~~e~~~~~~~k~~~~ 810 (829)
.+|+|.+|.+||..+
T Consensus 272 ~~Eg~~~f~~kr~~~ 286 (290)
T KOG1680|consen 272 RLEGMTAFAEKRKPK 286 (290)
T ss_pred HHHHHHHhcccCCcc
Confidence 999999999887533
No 29
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=100.00 E-value=3.3e-39 Score=355.69 Aligned_cols=319 Identities=29% Similarity=0.413 Sum_probs=277.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc---cCccccchhhhccccccchhhHhhhhccCCCcce
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI---TDPKMYNAYALMGESVSILPARVSYFLNLQGPCL 278 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~ 278 (829)
+++|+++|+++||++||++++.......++|+|+..+.+.... .......|+.+.+...+.++++|+..+|++||++
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~ 90 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGPAY 90 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCCCcc
Confidence 6789999999999999999555555566999998876653211 2234567778888888889999999999999999
Q ss_pred eeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEcc
Q psy11396 279 AIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKK 358 (829)
Q Consensus 279 tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~ 358 (829)
+|+.+|+|++.||++|+++|++|++|.+||+|+|.+..+.........+...++..++||+...+|+++|||++++||++
T Consensus 91 ~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~vL~~ 170 (332)
T cd00825 91 DVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEE 170 (332)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEEECc
Confidence 99999999999999999999999999999999999887776655666667778888999999999999999999999999
Q ss_pred chhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHh
Q psy11396 359 LKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESF 438 (829)
Q Consensus 359 ~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~ 438 (829)
.+.|+++|.+++++|.+++..+++.......+....+.++++++|+++|++++||||+++|++|++..|..|.+++...+
T Consensus 171 ~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~ 250 (332)
T cd00825 171 LEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEF 250 (332)
T ss_pred HHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHh
Confidence 99999999999999999999998876665677788999999999999999999999999999999999999999998887
Q ss_pred cccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCcc
Q psy11396 439 NKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKR 518 (829)
Q Consensus 439 ~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 518 (829)
+. .++++.+.|..+||+.+|++++++++++++++++.+||++|+.++++... .+..+.+ ....+
T Consensus 251 ~~-----~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~------~~~~~~~-----~~~~~ 314 (332)
T cd00825 251 GD-----KSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGL------NIVTETT-----PRELR 314 (332)
T ss_pred CC-----CCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCcccC------cccCCCC-----CCCCC
Confidence 63 14788999999999999999999999999999999999999999988221 2333322 23468
Q ss_pred EEEEeccCCCCceEEEEe
Q psy11396 519 MAAINSFGFSGTNAHIVL 536 (829)
Q Consensus 519 ~a~v~s~G~gG~na~~vl 536 (829)
++++++||+||+++|+||
T Consensus 315 ~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 315 TALLNGFGLGGTNATLVL 332 (332)
T ss_pred EEEEeeecCCCeeEEEeC
Confidence 999999999999999986
No 30
>PLN02888 enoyl-CoA hydratase
Probab=100.00 E-value=4.2e-40 Score=348.39 Aligned_cols=235 Identities=19% Similarity=0.270 Sum_probs=207.4
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH 660 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~ 660 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++...............+..+..+||||||+|||+
T Consensus 30 ~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~ 109 (265)
T PLN02888 30 ALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVFKGDVKDVETDPVAQMERCRKPIIGAINGF 109 (265)
T ss_pred cccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhccchhhHHHHHHHHHHHhCCCCEEEEECCe
Confidence 35888999999999999999999999999999999999999999876432111100011112233456999999999999
Q ss_pred ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396 661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740 (829)
Q Consensus 661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~ 740 (829)
|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+|+|.++
T Consensus 110 a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~ 189 (265)
T PLN02888 110 AITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGANRAREVSLTAMPLTAETAERWGLVNHVVEESE 189 (265)
T ss_pred eechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCccEeeChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhh-cCChHHHHHHHHHHhhccccCCCcc
Q psy11396 741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTF-VNNPSVITNIERYFDKSIKKNNSKI 815 (829)
Q Consensus 741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~e~~~~~~~k~~~~~~~k~ 815 (829)
+.+++.+++++|+..+|.+++.+|+.++..+...+++.+..|...+...+ ..+++.++++++|++||..|+.+|+
T Consensus 190 l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~d~~e~~~af~ekr~~~~~~~~ 265 (265)
T PLN02888 190 LLKKAREVAEAIIKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDYYNGMTKEQFQKMQEFIAGRSSKKPSKL 265 (265)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999998888888889888887777775 2589999999999999988777764
No 31
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=100.00 E-value=1.3e-39 Score=345.02 Aligned_cols=246 Identities=36% Similarity=0.613 Sum_probs=208.9
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|||||||+++|+|.+.++||++|.+|++++.++|. ||+...++++.....+....+.+++++ ...||+.+++++++
T Consensus 2 ~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (254)
T PF00109_consen 2 RRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPE-RWDPSDYYDPPSRVAGEIDDKKGGFID-DFDFDAYFFGIPPR 79 (254)
T ss_dssp S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCS-SSCHTTSTTSSCSEEECBSSSEESSST-TTCGGGTSTCHHHH
T ss_pred CEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeecc-ccccccccccCCcccccccccccceee-ecccccccccccch
Confidence 7899999999999999999999999999999999999 999999987777777777777788888 77899999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCc-eEEEEccccccccccc----cC--ccccchhhhccccccchhhHh
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSL-CGVFVGCAVSDYNKLI----TD--PKMYNAYALMGESVSILPARV 267 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~-~Gv~~g~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~a~~i 267 (829)
+++.||++++|++.++++||+|||+.+..+++.+ +||++|++.+++..+. .. +....++.+...+++.++++|
T Consensus 80 ~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~i 159 (254)
T PF00109_consen 80 EARRMDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRI 159 (254)
T ss_dssp HHHTS-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHH
T ss_pred hhhhhhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccch
Confidence 9999999999999999999999999988777765 9999999988653221 11 234445334445899999999
Q ss_pred hhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccc
Q psy11396 268 SYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVP 347 (829)
Q Consensus 268 a~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~ 347 (829)
++.||++||+++|+++|+||+.||+.|+++|++|++|++||||+|...++..+..|..++++++++.++|||.+++|+++
T Consensus 160 a~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~ 239 (254)
T PF00109_consen 160 AILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVL 239 (254)
T ss_dssp HHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-B
T ss_pred hhhcCCCCccccccccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999988999999999999999888899999999999999
Q ss_pred ccceEEEEEccchhh
Q psy11396 348 GEGVGVLMLKKLKDA 362 (829)
Q Consensus 348 gEGaaalvL~~~~~A 362 (829)
|||++++|||++++|
T Consensus 240 gEGa~~~vLe~~~~A 254 (254)
T PF00109_consen 240 GEGAGALVLERLEHA 254 (254)
T ss_dssp B-EEEEEEEEEHHHH
T ss_pred ECceEEEEEEEhhhC
Confidence 999999999999886
No 32
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=100.00 E-value=1.5e-39 Score=346.05 Aligned_cols=233 Identities=14% Similarity=0.210 Sum_probs=206.7
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCC--CeeeccCChhhhhhhhcccc---cccc--cccccccccCCCCEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE--NYFACGGTKEGLLKIQKGIS---RFTD--EKSYCMPLYCKIPVI 654 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g--~~F~~G~D~~~~~~~~~~~~---~~~~--~~~~~~~~~~~kp~I 654 (829)
.|++|.+|+.+|.++++++++|+++|+|||||.| ++||+|.|++++........ .+.. ...+..+..+|||||
T Consensus 32 ~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI 111 (278)
T PLN03214 32 VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAPKTSAARYAEFWLTQTTFLVRLLRSRLATV 111 (278)
T ss_pred CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhccccchHHHHHHHHHHHHHHHHHHcCCCCEE
Confidence 5889999999999999999999999999999997 79999999988642111100 0100 112233456999999
Q ss_pred EEecccccchhhhhhhccccccccccceeccccccccc-cCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396 655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF-TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM 733 (829)
Q Consensus 655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl-~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~ 733 (829)
|+|||+|+|||++|+++|||||++++++|++||+++|+ +|+++++++|++++|+.++++++++|+.|+++||+++||||
T Consensus 112 AaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~~G~~~a~~llltg~~~~a~eA~~~Glv~ 191 (278)
T PLN03214 112 CAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVIDRKVAESLLLRGRLVRPAEAKQLGLID 191 (278)
T ss_pred EEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHhcCHHHHHHHHHcCCccCHHHHHHcCCCc
Confidence 99999999999999999999999999999999999999 59888899999999999999999999999999999999999
Q ss_pred cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhccccCCC
Q psy11396 734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKNNS 813 (829)
Q Consensus 734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~~~~ 813 (829)
+|+|.+++.+++.+++++|+..+|.+++.+|+.++..+...++..++.|...+...+ .+++++|++++|++|.+|||.+
T Consensus 192 ~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~egi~aflek~~~~~~~ 270 (278)
T PLN03214 192 EVVPAAALMEAAASAMERALKLPSAARAATKALLREEFSAAWEAYYEEEAKGGWKML-SEPSIIKALGGVMERLSSGKEK 270 (278)
T ss_pred EecChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHhhcccc
Confidence 999999999999999999999999999999999998887788889999988888877 8999999999999999988887
Q ss_pred cc
Q psy11396 814 KI 815 (829)
Q Consensus 814 k~ 815 (829)
|-
T Consensus 271 ~~ 272 (278)
T PLN03214 271 KQ 272 (278)
T ss_pred cc
Confidence 63
No 33
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-39 Score=343.23 Aligned_cols=227 Identities=19% Similarity=0.313 Sum_probs=203.9
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-ccccccccccccCCCCEEEEecc
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-FTDEKSYCMPLYCKIPVIAAMQG 659 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~kp~Iaav~G 659 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++......... ......+..+..+||||||+|||
T Consensus 24 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G 103 (257)
T PRK05862 24 ALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADLSFMDVYKGDYITNWEKVARIRKPVIAAVAG 103 (257)
T ss_pred ccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhccchhHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 35888999999999999999999999999999999999999999886532111000 00111233455699999999999
Q ss_pred cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396 660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK 739 (829)
Q Consensus 660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~ 739 (829)
+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+|+|.+
T Consensus 104 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~ 183 (257)
T PRK05862 104 YALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAMDLCLTGRMMDAAEAERAGLVSRVVPAD 183 (257)
T ss_pred EEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCCEeeCHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
++++++.+++++|+..+|.+++.+|++++..+...+.+.++.|...+...+ .++++++++++|++|+.
T Consensus 184 ~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~~~~e~i~af~~kr~ 251 (257)
T PRK05862 184 KLLDEALAAATTIASFSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLF-ATEDQKEGMAAFVEKRK 251 (257)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhccCC
Confidence 999999999999999999999999999999888889999999999998888 78999999999999874
No 34
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.7e-39 Score=339.25 Aligned_cols=228 Identities=17% Similarity=0.241 Sum_probs=201.5
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-ccccccccccccCCCCEEEEecc
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-FTDEKSYCMPLYCKIPVIAAMQG 659 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~kp~Iaav~G 659 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++......... ..........+.+||||||+|||
T Consensus 23 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIaav~G 102 (254)
T PRK08259 23 VRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTGRGNRLHPSGDGPMGPSRMRLSKPVIAAVSG 102 (254)
T ss_pred cccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhcccchhhhhhhcchhhhHHhcCCCCEEEEECC
Confidence 46889999999999999999999999999999999999999999986532111000 00011111223589999999999
Q ss_pred cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396 660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK 739 (829)
Q Consensus 660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~ 739 (829)
+|+|||++|+++|||||++++++|++||+++|++|.+|++++|++++|+.++++++++|++|+++||+++||||+|+|.+
T Consensus 103 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~lll~g~~~~a~eA~~~Glv~~vv~~~ 182 (254)
T PRK08259 103 YAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDLILTGRPVDADEALAIGLANRVVPKG 182 (254)
T ss_pred EEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCEeeChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcccc
Q psy11396 740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIKK 810 (829)
Q Consensus 740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~ 810 (829)
++.+++.+++++|+..+|.+++.+|++++......+++.+..|...+...+ . ++.+|++.+|++|+.|+
T Consensus 183 ~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~-~-~d~~egi~af~~~~~~~ 251 (254)
T PRK08259 183 QARAAAEELAAELAAFPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVL-A-AEALEGAARFAAGAGRH 251 (254)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH-h-hHHHHHHHHHHhhhccc
Confidence 999999999999999999999999999998777788999898888777777 4 99999999999988544
No 35
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.7e-39 Score=341.39 Aligned_cols=226 Identities=19% Similarity=0.271 Sum_probs=202.6
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcc-cc----cccc--cccccccccCCCCE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKG-IS----RFTD--EKSYCMPLYCKIPV 653 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~-~~----~~~~--~~~~~~~~~~~kp~ 653 (829)
.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++...... .. .+.. ...+..+..+||||
T Consensus 24 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 103 (260)
T PRK05980 24 LNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVALRDFVRRGQAMTARLEAFPKPV 103 (260)
T ss_pred ccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCCCCE
Confidence 5778999999999999999999999999999998 799999999886432110 00 0000 11223345599999
Q ss_pred EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396 654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM 733 (829)
Q Consensus 654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~ 733 (829)
||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||+++||||
T Consensus 104 Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~ 183 (260)
T PRK05980 104 IAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRALELLLTGDAFSAERALEIGLVN 183 (260)
T ss_pred EEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHHHHHHcCCccCHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+|+|++++++++.+++++|+..+|.+++.+|+.++......+++.++.|...+...+ .+++.++++++|++|+.
T Consensus 184 ~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~e~~~af~~kr~ 257 (260)
T PRK05980 184 AVVPHEELLPAARALARRIIRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMA-GSADLREGLAAWIERRR 257 (260)
T ss_pred cccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhccCC
Confidence 999999999999999999999999999999999998888889999999999998888 79999999999999874
No 36
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.4e-39 Score=339.24 Aligned_cols=225 Identities=18% Similarity=0.271 Sum_probs=200.6
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH 660 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~ 660 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++....... .............+||||||+|||+
T Consensus 23 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~-~~~~~~~~~~~~~~~kPvIaav~G~ 101 (254)
T PRK08252 23 ARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARGERPS-IPGRGFGGLTERPPRKPLIAAVEGY 101 (254)
T ss_pred ccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcccchh-hhHHHHHHHHHhcCCCCEEEEECCE
Confidence 357889999999999999999999999999999999999999998875321111 0000000011134899999999999
Q ss_pred ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396 661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740 (829)
Q Consensus 661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~ 740 (829)
|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+|+|+++
T Consensus 102 a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~ 181 (254)
T PRK08252 102 ALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAMELALTGDMLTAERAHELGLVNRLTEPGQ 181 (254)
T ss_pred EehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHHHHHHHHHcCCccCHHHHHHcCCcceecCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396 741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS 807 (829)
Q Consensus 741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~ 807 (829)
+.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .++++++++++|++|+
T Consensus 182 l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~~~~eg~~af~~kr 247 (254)
T PRK08252 182 ALDAALELAERIAANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVF-TSADAKEGATAFAEKR 247 (254)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhcCC
Confidence 99999999999999999999999999998877788999999988888888 7999999999999976
No 37
>PLN02600 enoyl-CoA hydratase
Probab=100.00 E-value=4.1e-39 Score=338.61 Aligned_cols=227 Identities=20% Similarity=0.365 Sum_probs=202.9
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCC-CCeeeccCChhhhhhhhccc-cccc--ccccccccccCCCCEEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACGGTKEGLLKIQKGI-SRFT--DEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~~-~~~~--~~~~~~~~~~~~kp~Iaa 656 (829)
..|++|.+|+.+|.+++++++.|+++|+|||+|. |++||+|+|++++....... ..+. ....+..+..+||||||+
T Consensus 15 ~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 94 (251)
T PLN02600 15 AKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKMSPSEVQKFVNSLRSTFSSLEALSIPTIAV 94 (251)
T ss_pred ccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhccChHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 3588899999999999999999999999999998 58999999999864321110 0000 011223344599999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.++++||+++||||+++
T Consensus 95 v~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv 174 (251)
T PLN02600 95 VEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRIGAREAASMGLVNYCV 174 (251)
T ss_pred ecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCcEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|++++++++.+++++|+..+|.+++.+|+.++......+++.++.|...+...+ .+++++|++++|++|+.
T Consensus 175 ~~~~~~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~ekr~ 245 (251)
T PLN02600 175 PAGEAYEKALELAQEINQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVL-KTKDRLEGLAAFAEKRK 245 (251)
T ss_pred ChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999998877889999999999998888 79999999999999874
No 38
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=100.00 E-value=4.5e-39 Score=339.34 Aligned_cols=226 Identities=22% Similarity=0.350 Sum_probs=203.4
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc-cccccccccccCCCCEEEEeccc
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF-TDEKSYCMPLYCKIPVIAAMQGH 660 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~kp~Iaav~G~ 660 (829)
.|++|.+|+.+|.++++.+++|+++|+|||+|.|++||+|+|++++.......... .....+..+..+||||||+|||+
T Consensus 23 ~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~ 102 (255)
T PRK09674 23 RNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEKDLAATLNDPRPQLWQRLQAFNKPLIAAVNGY 102 (255)
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhccchhhhHHHHHHHHHHHHHhCCCCEEEEECCE
Confidence 68899999999999999999999999999999999999999998864321110000 01112334456999999999999
Q ss_pred ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396 661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740 (829)
Q Consensus 661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~ 740 (829)
|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.++++||+++||||+|+|+++
T Consensus 103 a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~ 182 (255)
T PRK09674 103 ALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQMVLTGESITAQQAQQAGLVSEVFPPEL 182 (255)
T ss_pred eehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCcEecChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+.+++.+++++|+..+|.+++.+|+.++......+.+.++.|...+...+ .++++++++++|++|+.
T Consensus 183 ~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~e~i~af~~kr~ 249 (255)
T PRK09674 183 TLERALQLASKIARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLA-ATEDRHEGISAFLEKRT 249 (255)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhccCC
Confidence 99999999999999999999999999998888889999999999888888 79999999999999863
No 39
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.3e-39 Score=339.69 Aligned_cols=227 Identities=15% Similarity=0.213 Sum_probs=202.7
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc-cccccc--cccccc-ccccCCCCEEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-GISRFT--DEKSYC-MPLYCKIPVIAA 656 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-~~~~~~--~~~~~~-~~~~~~kp~Iaa 656 (829)
..|++|.+|+.+|.++++++++|+++|+|||+|.|+.||+|+|++++..... ....+. ....+. .+..+||||||+
T Consensus 19 ~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 98 (255)
T PRK06563 19 KRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLAAGGFPFPEGGIDPWGTVGRRLSKPLVVA 98 (255)
T ss_pred cccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhccccchhhhhhhhhHHHHHHHhcCCCCEEEE
Confidence 3588999999999999999999999999999999999999999988753211 111110 111111 244599999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++|||||++++++|++||+++|++|+++++++|++++|+.++++++++|++|+++||+++||||+|+
T Consensus 99 v~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv 178 (255)
T PRK06563 99 VQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRYLLTGDEFDAQEALRLGLVQEVV 178 (255)
T ss_pred EcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHHHHcCCCcCHHHHHHcCCCcEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|++++.+++.+++++|+..+|.+++.+|++++......+.+.++.|...+...+ .+++++|++.+|++||.
T Consensus 179 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~~kr~ 249 (255)
T PRK06563 179 PPGEQLERAIELAERIARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLF-TSEDAKEGVQAFLERRP 249 (255)
T ss_pred CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhcCCC
Confidence 999999999999999999999999999999998877889999999988888888 78899999999999874
No 40
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=100.00 E-value=3.8e-37 Score=338.66 Aligned_cols=336 Identities=15% Similarity=0.078 Sum_probs=258.5
Q ss_pred CCEEEEecccccCCCCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 115 DDIAIIGISGQFPKANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 115 ~~IaItG~g~~~p~g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
++|+|+|+|+++|.|.+.++.|.++++|.+.....+ | ++... +..+....+ +-++
T Consensus 3 ~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~---~-----~~~~~---~~~i~~~~~--------------~~~~ 57 (348)
T PRK06147 3 RALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETR---F-----IDPPG---GEWLIGAPV--------------PLPP 57 (348)
T ss_pred CceEEEecceeecCcCCHHHHHHHHHcccccccccc---c-----ccCCC---CCceEeecC--------------cCCc
Confidence 579999999999999999999999999987664422 1 11100 000110000 1111
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHcC-CCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC
Q psy11396 195 EAEYMDPQQRLFLQNCWTCIEDAG-YNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL 273 (829)
Q Consensus 195 ~~~~~d~~~~l~l~aa~~AL~dAG-l~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 273 (829)
......+..+|+..|+++||++++ +++.+ ++++++.+...-. ..+. ......+..++..+|+
T Consensus 58 ~~~~~~r~~~La~~Al~~aL~~a~~~~~~~-----i~lil~~~~~~~~--------~~~~----~~~~~~~~~~~~~lG~ 120 (348)
T PRK06147 58 PWRGPERLAEMAAPAIAEALEGLPALDASE-----APLLLCVAEEERP--------GRPP----DLEERLLRELEARLGL 120 (348)
T ss_pred ccCchHHHHHHHHHHHHHHHHhcccccccC-----CcEEEEeCchhcC--------CCCc----chHHHHHHHHHHHhCC
Confidence 122234677899999999999998 44443 4666664331100 0000 0111235567777777
Q ss_pred --CCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccce
Q psy11396 274 --QGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGV 351 (829)
Q Consensus 274 --~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGa 351 (829)
++|+++|.++|+|+++||..|+++|++|++|.+||||+|.+..+..+..|...+.+.. +.+++|+++||||
T Consensus 121 ~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~-------~~~~~G~v~GEGA 193 (348)
T PRK06147 121 RLEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT-------SQNSNGFIPGEAA 193 (348)
T ss_pred CCCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC-------CCCCCceeeeceE
Confidence 5789999999999999999999999999999999999999888877777777665542 1368999999999
Q ss_pred EEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCC-CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHH
Q psy11396 352 GVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITA-PNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIE 430 (829)
Q Consensus 352 aalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~-p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E 430 (829)
+++||++.++|+++|++||+ .|++.+.++.+..... +++.++.++|++||+++|++|+|||||++|+|||+.+|..|
T Consensus 194 ~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e 271 (348)
T PRK06147 194 AAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEA 271 (348)
T ss_pred EEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHH
Confidence 99999999999999999999 6777766664332222 36889999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccc
Q psy11396 431 FEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSW 510 (829)
Q Consensus 431 ~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~ 510 (829)
..++.++|+... ...++.+.|+.+||+++|+|+++++.++++|++|++|+.
T Consensus 272 ~~A~~~~f~~~~---~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~-------------------------- 322 (348)
T PRK06147 272 ALAEMRLFRVRK---EFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGP-------------------------- 322 (348)
T ss_pred HHHHHHHhhhcc---CCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCC--------------------------
Confidence 999999998532 346799999999999999999999999999999999862
Q ss_pred cccccCccEEEEeccCCCCceEEEEeee
Q psy11396 511 DIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 511 ~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
+++|.|..-.|.-+++||+.
T Consensus 323 --------~~L~~s~~d~g~r~a~~l~~ 342 (348)
T PRK06147 323 --------NVLCHLSDDDGARAALVLEY 342 (348)
T ss_pred --------cEEEEecCCCCceEEEEEec
Confidence 36778888888889999985
No 41
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.4e-39 Score=338.23 Aligned_cols=225 Identities=16% Similarity=0.265 Sum_probs=199.6
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc-cc-cc-ccccccccccCCCCEEEEe
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI-SR-FT-DEKSYCMPLYCKIPVIAAM 657 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~kp~Iaav 657 (829)
..|++|.+|+.+|.++++.++ +++|+|||||.|++||+|+|++++....... .. .. ....+..+..+||||||+|
T Consensus 22 ~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav 99 (255)
T PRK08150 22 KRNALNDGLIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRERDAGEGMHHSRRWHRVFDKIQYGRVPVIAAL 99 (255)
T ss_pred cccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhccchhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 358889999999999999987 7899999999999999999999875321110 00 00 1112333455999999999
Q ss_pred cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396 658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP 737 (829)
Q Consensus 658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~ 737 (829)
||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||++|||||+|+|
T Consensus 100 ~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~ 179 (255)
T PRK08150 100 HGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTDMMLTGRVYDAQEGERLGLAQYLVP 179 (255)
T ss_pred CCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCccEeeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
.+++.+++.+++++|+..+|.+++.+|++++......+++.+..|...+...+ .+++.++++++|++|+.
T Consensus 180 ~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~s~d~~eg~~af~~kr~ 249 (255)
T PRK08150 180 AGEALDKAMELARRIAQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQ-SAPEAKERLRAFLEKKA 249 (255)
T ss_pred chHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999998877788899888888777777 78999999999999874
No 42
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.1e-39 Score=338.64 Aligned_cols=225 Identities=17% Similarity=0.291 Sum_probs=200.7
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccc-cccc--ccccccccccCCCCEEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGI-SRFT--DEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~-~~~~--~~~~~~~~~~~~kp~Iaa 656 (829)
+.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++....... ..+. ....+..+..+||||||+
T Consensus 27 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 106 (256)
T PRK06143 27 SLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATLDQASAEAFISRLRDLCDAVRHFPVPVIAR 106 (256)
T ss_pred ccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhcChhhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 46889999999999999999999999999999998 7999999998864321110 0000 011233345599999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++|||||++++++|++||+++|+ |+++++++|++++|+.++++++++|++++++||+++||||+|+
T Consensus 107 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv 185 (256)
T PRK06143 107 IPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWARTRWLLLTGETIDAAQALAWGLVDRVV 185 (256)
T ss_pred ECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHCCCcCeec
Confidence 999999999999999999999999999999999998 7788889999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396 737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS 807 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~ 807 (829)
|++++++++.+++++|+..+|.++..+|++++......+++.++.|...+...+ .++++++++++|++||
T Consensus 186 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~d~~e~~~af~ekr 255 (256)
T PRK06143 186 PLAELDAAVERLAASLAGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAF-LTGEPQRHMAAFLNRK 255 (256)
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHh-cChHHHHHHHHHHhhc
Confidence 999999999999999999999999999999998877789999999999888888 7899999999999986
No 43
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.7e-39 Score=339.82 Aligned_cols=226 Identities=17% Similarity=0.190 Sum_probs=202.1
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc---c-c--cccccccccCCCCEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF---T-D--EKSYCMPLYCKIPVIA 655 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~---~-~--~~~~~~~~~~~kp~Ia 655 (829)
.|++|.+|+++|.++++.++.|+++|+|||+|.|++||+|+|++++.......... . . ...+..+..+||||||
T Consensus 26 ~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpvIa 105 (263)
T PRK07799 26 RNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKPPGDSFKDGSYDPSRIDALLKGRRLTKPLIA 105 (263)
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhccccchhhhhhhhhhHHHHHHHHhcCCCCEEE
Confidence 58889999999999999999999999999999999999999999875432111000 0 0 0111223459999999
Q ss_pred EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV 735 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v 735 (829)
+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+|
T Consensus 106 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~v 185 (263)
T PRK07799 106 AVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEIGLIGHV 185 (263)
T ss_pred EECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+|++++.+++.+++++|+..+|.+++.+|++++......+.+.++.|...+...+ .++++++++++|++|+.
T Consensus 186 v~~~~l~~~a~~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~~~~egi~af~~~r~ 257 (263)
T PRK07799 186 VPDGQALDKALELAELINANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVF-LSEDAKEGPRAFAEKRA 257 (263)
T ss_pred cCcchHHHHHHHHHHHHHhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCccHHHHHHHHHccCC
Confidence 9999999999999999999999999999999998877789999999999888888 79999999999999763
No 44
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=100.00 E-value=5.7e-39 Score=339.00 Aligned_cols=226 Identities=16% Similarity=0.243 Sum_probs=202.2
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc-c-c----cccccccccCCCCEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF-T-D----EKSYCMPLYCKIPVI 654 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~-~-~----~~~~~~~~~~~kp~I 654 (829)
..|++|.+|+.+|.++++.++.|+ +|+|||+|.|++||+|+|++++.......... . . ...+..+..+|||||
T Consensus 19 ~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI 97 (256)
T TIGR02280 19 KLNSFTAEMHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTPGGAPDLGRTIETFYNPLVRRLRALPLPVV 97 (256)
T ss_pred cccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhccccchhHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 468899999999999999999998 99999999999999999999875321110000 0 0 111223455999999
Q ss_pred EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396 655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP 734 (829)
Q Consensus 655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~ 734 (829)
|+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|+.++++++++|++|+++||+++|||++
T Consensus 98 aav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~ 177 (256)
T TIGR02280 98 CAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLAMLGEKLDARTAASWGLIWQ 177 (256)
T ss_pred EEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|+|++++++++.+++++|+..+|.+++.+|+.++......+++.++.|...+...+ .+++.++++.+|++|+.
T Consensus 178 vv~~~~l~~~a~~~a~~la~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~~kr~ 250 (256)
T TIGR02280 178 VVDDAALMDEAQALAVHLAAQPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELG-RSADYAEGVTAFLDKRN 250 (256)
T ss_pred eeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999998888889999999999888888 79999999999999874
No 45
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.8e-39 Score=338.30 Aligned_cols=227 Identities=18% Similarity=0.219 Sum_probs=199.1
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecc
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQG 659 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G 659 (829)
..|++|.+|+.+|.++++.+++|+++|+|||+|.| ++||+|+|++++...............+.....+||||||+|||
T Consensus 24 ~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIaav~G 103 (259)
T PRK06494 24 VMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGGKRGWPESGFGGLTSRFDLDKPIIAAVNG 103 (259)
T ss_pred ccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcCcchhhhHHHHHHHHHhcCCCCEEEEECC
Confidence 35888999999999999999999999999999998 79999999988643211100001111122234699999999999
Q ss_pred cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396 660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK 739 (829)
Q Consensus 660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~ 739 (829)
+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+++|++
T Consensus 104 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~lll~g~~~~a~eA~~~GLv~~vv~~~ 183 (259)
T PRK06494 104 VAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRAMGMILTGRRVTAREGLELGFVNEVVPAG 183 (259)
T ss_pred EEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHHHHHHHHHcCCcCCHHHHHHcCCCcEecCHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHH--HHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHE--LTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e--~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
++++++.+++++|+..+|.+++.+|+.++......+++.++.| ...+...+ .+++++|++++|++|+.
T Consensus 184 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~-~~~d~~eg~~af~~kr~ 253 (259)
T PRK06494 184 ELLAAAERWADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEARR-ASQDYIEGPKAFAEKRP 253 (259)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh-cCccHHHHHHHHHccCC
Confidence 9999999999999999999999999999988777888888888 44566666 78999999999999763
No 46
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.6e-39 Score=339.19 Aligned_cols=226 Identities=17% Similarity=0.236 Sum_probs=201.9
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccc-ccc--ccccccccccCCCCEEEEe
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGIS-RFT--DEKSYCMPLYCKIPVIAAM 657 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~-~~~--~~~~~~~~~~~~kp~Iaav 657 (829)
.|++|.+|+.+|.++++.+++|+++|+|||+|.| ++||+|+|++++........ ... ....+..+..+||||||+|
T Consensus 23 ~Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav 102 (258)
T PRK09076 23 ANTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADGDKAVAREMARRFGEAFEALSAFRGVSIAAI 102 (258)
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhcChhhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 4889999999999999999999999999999998 78999999988643211100 000 0112333456999999999
Q ss_pred cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396 658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP 737 (829)
Q Consensus 658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~ 737 (829)
||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++++++||+++||||+|+|
T Consensus 103 ~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~ 182 (258)
T PRK09076 103 NGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGWAKRMILCGERVDAATALRIGLVEEVVE 182 (258)
T ss_pred CCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCCceecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .+++++|++++|++|+.
T Consensus 183 ~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~eg~~af~~kr~ 252 (258)
T PRK09076 183 KGEAREAALALAQKVANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLF-DTEDQREGVNAFLEKRA 252 (258)
T ss_pred chhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhcCCC
Confidence 99999999999999999999999999999998877789999999999998888 78999999999999763
No 47
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8e-39 Score=338.63 Aligned_cols=226 Identities=21% Similarity=0.333 Sum_probs=202.8
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc-ccccccccccCCCCEEEEeccc
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT-DEKSYCMPLYCKIPVIAAMQGH 660 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~kp~Iaav~G~ 660 (829)
.|++|.+|+.+|.++++.+++|+++|+|||+|.|++||+|+|++++........... ....+..+..+||||||+|||+
T Consensus 29 ~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~ 108 (261)
T PRK08138 29 RNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATAGAIEMYLRHTERYWEAIAQCPKPVIAAVNGY 108 (261)
T ss_pred cCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhccchhHHHHHHHHHHHHHHHhCCCCEEEEEccE
Confidence 588899999999999999999999999999999999999999988653211110000 1112334456999999999999
Q ss_pred ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396 661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740 (829)
Q Consensus 661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~ 740 (829)
|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+|+|+++
T Consensus 109 a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~ 188 (261)
T PRK08138 109 ALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFKAMRMALTGCMVPAPEALAIGLVSEVVEDEQ 188 (261)
T ss_pred EEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCCcEecCchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+.+++.+++++|+..+|.+++.+|++++......+++.+..|...+...+ .++++++++++|++|+.
T Consensus 189 l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~~i~af~~kr~ 255 (261)
T PRK08138 189 TLPRALELAREIARMPPLALAQIKEVVLAGADAPLDAALALERKAFQLLF-DSEDQKEGMDAFLEKRK 255 (261)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999998877788999999999898888 79999999999999874
No 48
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.7e-39 Score=342.02 Aligned_cols=227 Identities=16% Similarity=0.237 Sum_probs=202.7
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc-------c--cccc-----cccccccc
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG-------I--SRFT-----DEKSYCMP 646 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~-------~--~~~~-----~~~~~~~~ 646 (829)
..|++|.+|+.+|.++++++++|+++|+|||+|.|++||+|+|++++...... . .... ....+..+
T Consensus 26 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 105 (272)
T PRK06142 26 KGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLGKDGLARPRTDLRREILRLQAAINAV 105 (272)
T ss_pred ccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhcccccccccccchHHHHHHHHHHHHHHHHH
Confidence 56889999999999999999999999999999999999999999987532100 0 0000 01112334
Q ss_pred ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH
Q psy11396 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL 726 (829)
Q Consensus 647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA 726 (829)
..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||
T Consensus 106 ~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~l~g~~~~a~eA 185 (272)
T PRK06142 106 ADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRIIGDGHLRELALTGRDIDAAEA 185 (272)
T ss_pred HhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHhCHHHHHHHHHhCCCcCHHHH
Confidence 45999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcccccCh-hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q psy11396 727 KERGISMPVLPR-KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFD 805 (829)
Q Consensus 727 ~~~GLv~~v~~~-~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~ 805 (829)
+++||||+|+|+ +++++++.+++++|+..+|.+++.+|+.++......+++.+..+...+...+ .+++++|++.+|++
T Consensus 186 ~~~GLv~~vv~~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~~~~~-~~~d~~egv~af~~ 264 (272)
T PRK06142 186 EKIGLVNRVYDDADALLAAAHATAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATWNAAML-PSKDLTEAIAAHME 264 (272)
T ss_pred HHcCCccEecCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCccHHHHHHHHhc
Confidence 999999999995 8899999999999999999999999999998877789999999998888888 79999999999999
Q ss_pred hcc
Q psy11396 806 KSI 808 (829)
Q Consensus 806 k~~ 808 (829)
|+.
T Consensus 265 kr~ 267 (272)
T PRK06142 265 KRP 267 (272)
T ss_pred CCC
Confidence 884
No 49
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=100.00 E-value=1.1e-38 Score=339.45 Aligned_cols=227 Identities=16% Similarity=0.251 Sum_probs=198.9
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc-c----ccc--ccccccccccCCCCE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI-S----RFT--DEKSYCMPLYCKIPV 653 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~-~----~~~--~~~~~~~~~~~~kp~ 653 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++....... . ... ....+..+..+||||
T Consensus 28 ~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 107 (275)
T PRK09120 28 KRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEILQERIRREAYGWWRRLRWYQKPT 107 (275)
T ss_pred cccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhccccchhHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 468899999999999999999999999999999999999999998864311100 0 000 011233345599999
Q ss_pred EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396 654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM 733 (829)
Q Consensus 654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~ 733 (829)
||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++|||+
T Consensus 108 IAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~llltg~~~~A~eA~~~Glv~ 187 (275)
T PRK09120 108 IAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRDALYYIMTGETFTGRKAAEMGLVN 187 (275)
T ss_pred EEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHHHHHHHHhcCCccCHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHH--HHhhhcCCh-HHHHHHHHHHhhcc
Q psy11396 734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTM--HDYTFVNNP-SVITNIERYFDKSI 808 (829)
Q Consensus 734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~--~~~~~~~~~-~~~e~~~~~~~k~~ 808 (829)
+|+|.+++++++.+++++|+..+|.+++.+|+.++......+.+.++.+... ....+ .++ +++|++++|++|+.
T Consensus 188 ~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~-~~~~d~~eg~~afl~kr~ 264 (275)
T PRK09120 188 ESVPLAQLRARTRELAAKLLEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSL-DPEGGREEGLKQFLDDKS 264 (275)
T ss_pred eecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999998888888888877543 33446 566 89999999999886
No 50
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1e-38 Score=337.60 Aligned_cols=226 Identities=19% Similarity=0.325 Sum_probs=203.2
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--cc-c-ccccccccccCCCCEEEEe
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RF-T-DEKSYCMPLYCKIPVIAAM 657 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~~-~-~~~~~~~~~~~~kp~Iaav 657 (829)
.|+++.+|+.+|.++++.+++|+++|+|||+|.|++||+|+|++++........ .. . ....+..+..+||||||+|
T Consensus 22 ~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIAav 101 (257)
T PRK07658 22 ANALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSVTEAEQATELAQLGQVTFERVEKFSKPVIAAI 101 (257)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccCchhhHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 488899999999999999999999999999999999999999988743221100 00 0 0112333456999999999
Q ss_pred cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396 658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP 737 (829)
Q Consensus 658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~ 737 (829)
||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..++++++++|++++++||+++||||+|+|
T Consensus 102 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~ 181 (257)
T PRK07658 102 HGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEMMLTSEPITGAEALKWGLVNGVFP 181 (257)
T ss_pred cCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCCcCeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
++++.+++.+++++|++.+|.+++.+|++++......+++.++.|...+...+ .+++.++++.+|++|+.
T Consensus 182 ~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~egi~af~~kr~ 251 (257)
T PRK07658 182 EETLLDDAKKLAKKIAGKSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVF-TSEDAKEGVQAFLEKRK 251 (257)
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999998877789999999999999888 79999999999999863
No 51
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=100.00 E-value=8.9e-39 Score=340.64 Aligned_cols=227 Identities=19% Similarity=0.218 Sum_probs=201.3
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc----c-----cccc----c-ccccccc
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG----I-----SRFT----D-EKSYCMP 646 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~----~-----~~~~----~-~~~~~~~ 646 (829)
..|+++.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++...... . .... . ...+..+
T Consensus 28 ~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 107 (275)
T PLN02664 28 QRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSSSGDRGRSGERLRRKIKFLQDAITAI 107 (275)
T ss_pred ccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhcccccccccchhhHHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999887532110 0 0000 0 1112334
Q ss_pred ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH
Q psy11396 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL 726 (829)
Q Consensus 647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA 726 (829)
..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++|+++||
T Consensus 108 ~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~eA 187 (275)
T PLN02664 108 EQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGYGNAMELALTGRRFSGSEA 187 (275)
T ss_pred HhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHH
Confidence 55999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcccccCh-hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q psy11396 727 KERGISMPVLPR-KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFD 805 (829)
Q Consensus 727 ~~~GLv~~v~~~-~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~ 805 (829)
+++||||+|||+ +++.+.+.+++++|+..+|.+++.+|++++......+.+.++.|...+...+ .+++++|++++|++
T Consensus 188 ~~~GLv~~vv~~~~~l~~~~~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~e 266 (275)
T PLN02664 188 KELGLVSRVFGSKEDLDEGVRLIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWNSAML-VSDDLNEAVSAQIQ 266 (275)
T ss_pred HHcCCCceeeCChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhc-cChhHHHHHHHHhc
Confidence 999999999994 8899999999999999999999999999998877789999999988888887 79999999999999
Q ss_pred hcc
Q psy11396 806 KSI 808 (829)
Q Consensus 806 k~~ 808 (829)
||.
T Consensus 267 kr~ 269 (275)
T PLN02664 267 KRK 269 (275)
T ss_pred cCC
Confidence 873
No 52
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.8e-38 Score=335.03 Aligned_cols=226 Identities=16% Similarity=0.202 Sum_probs=203.2
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc--ccc-c----ccccccccccCCCCE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI--SRF-T----DEKSYCMPLYCKIPV 653 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~--~~~-~----~~~~~~~~~~~~kp~ 653 (829)
..|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++....... ... . ....+..+..+||||
T Consensus 22 ~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 101 (255)
T PRK07260 22 VSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDDVQSLVKIAELVNEISFAIKQLPKPV 101 (255)
T ss_pred cccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccccchhhHHHHHHHHHHHHHHHHcCCCCE
Confidence 358899999999999999999999999999999999999999999875321111 000 0 011223345599999
Q ss_pred EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396 654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM 733 (829)
Q Consensus 654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~ 733 (829)
||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++|||+
T Consensus 102 Iaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~sa~eA~~~Glv~ 181 (255)
T PRK07260 102 IMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRATHLAMTGEALTAEKALEYGFVY 181 (255)
T ss_pred EEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHHHHHHHHHhCCccCHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396 734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS 807 (829)
Q Consensus 734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~ 807 (829)
+++|.+++.+++.+++++++..+|.+++.+|+.++......++..+..|...+...+ .++++++++++|++|+
T Consensus 182 ~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~e~~~af~~kr 254 (255)
T PRK07260 182 RVAESEKLEKTCEQLLKKLRRGSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLA-FKEDFKEGVRAFSERR 254 (255)
T ss_pred eecCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999888889999999988888888 7999999999999987
No 53
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-38 Score=337.93 Aligned_cols=226 Identities=22% Similarity=0.385 Sum_probs=201.1
Q ss_pred cCCccc-ccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc----ccc----cc--ccccccccccCC
Q psy11396 582 KDLKNS-TVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG----ISR----FT--DEKSYCMPLYCK 650 (829)
Q Consensus 582 ~n~~~~-~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~----~~~----~~--~~~~~~~~~~~~ 650 (829)
.|++|. +|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++...... ... +. ....+..+..+|
T Consensus 24 ~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 103 (266)
T PRK09245 24 RNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGSPADIRQGYRHGIQRIPLALYNLE 103 (266)
T ss_pred ccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhccccccccchhHHHHHHHHHHHHHHHHHcCC
Confidence 577885 8999999999999999999999999999999999999987532110 000 00 011223344599
Q ss_pred CCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcC
Q psy11396 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERG 730 (829)
Q Consensus 651 kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~G 730 (829)
|||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..++++++++|++++++||+++|
T Consensus 104 kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~G 183 (266)
T PRK09245 104 VPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGMARAAEMAFTGDAIDAATALEWG 183 (266)
T ss_pred CCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhHHHHHHHHHcCCCcCHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 731 ISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 731 Lv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|||+|+|.+++++++.+++++|++.||.+++.+|++++......+++.+..|...+...+ .+++.++++++|++|+.
T Consensus 184 lv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~~kr~ 260 (266)
T PRK09245 184 LVSRVVPADQLLPAARALAERIAANPPHALRLTKRLLREGQHASLDTLLELSAAYQALAH-HTADHREAVDAFLEKRP 260 (266)
T ss_pred CcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh-cCHhHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999998877788888888888888888 78999999999999874
No 54
>PRK08139 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.6e-38 Score=336.76 Aligned_cols=226 Identities=14% Similarity=0.210 Sum_probs=200.2
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc--cc-cc-ccccccccccCCCCEEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI--SR-FT-DEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~--~~-~~-~~~~~~~~~~~~kp~Iaa 656 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++....... .. +. ....+..+..+||||||+
T Consensus 31 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 110 (266)
T PRK08139 31 AFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAARGLAYFRALFARCSRVMQAIVALPQPVIAR 110 (266)
T ss_pred cccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhcccchhHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 458889999999999999999999999999999999999999998864321110 00 00 011223345699999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++|||||++++++|++||+++|++|+++ .++|++++|..++++++++|++|+++||+++||||+|+
T Consensus 111 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv 189 (266)
T PRK08139 111 VHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPRKQAMEMLLTGEFIDAATAREWGLVNRVV 189 (266)
T ss_pred ECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCccEee
Confidence 99999999999999999999999999999999999998765 56899999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|++++++.+.+++++|+..+|.+++.+|++++..+...+++.++.|...+...+ .++++++++++|++|+.
T Consensus 190 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~~kr~ 260 (266)
T PRK08139 190 PADALDAAVARLAAVIAAKSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENM-MAEDAEEGIDAFLEKRP 260 (266)
T ss_pred ChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999888889999999998888888 78999999999999864
No 55
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-38 Score=337.35 Aligned_cols=227 Identities=16% Similarity=0.238 Sum_probs=203.6
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccc---cccc--cccccccccCCCCEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGIS---RFTD--EKSYCMPLYCKIPVI 654 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~---~~~~--~~~~~~~~~~~kp~I 654 (829)
..|+++.+|+.+|.++++.+++|+++++|||+|.| ++||+|+|++.+........ .+.. ...+..+..+|||||
T Consensus 31 ~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvI 110 (269)
T PRK06127 31 RHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESRSDAEAVAAYEQAVEAAQAALADYAKPTI 110 (269)
T ss_pred ccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcccchHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 56889999999999999999999999999999998 79999999988653211100 0000 112233456999999
Q ss_pred EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396 655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP 734 (829)
Q Consensus 655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~ 734 (829)
|+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|..++++++++|++++++||+++||||+
T Consensus 111 aav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~ 190 (269)
T PRK06127 111 ACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSAAKDLFYTARRFDAAEALRIGLVHR 190 (269)
T ss_pred EEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|+|.+++++++++++++|+..+|.+++.+|++++..+...++..++.|...+...+ .+++.++++.+|++|+.
T Consensus 191 vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~e~~~af~ekr~ 263 (269)
T PRK06127 191 VTAADDLETALADYAATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACF-DSEDYREGRAAFMEKRK 263 (269)
T ss_pred eeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh-cChHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999998888889999999988888888 79999999999999874
No 56
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-38 Score=336.24 Aligned_cols=227 Identities=21% Similarity=0.305 Sum_probs=203.1
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccc-ccc--cccccccccccCCCCEEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGI-SRF--TDEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~-~~~--~~~~~~~~~~~~~kp~Iaa 656 (829)
..|+++.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....... ... .....+..+..+||||||+
T Consensus 24 ~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaa 103 (260)
T PRK07657 24 AANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGMNEEQVRHAVSLIRTTMEMVEQLPQPVIAA 103 (260)
T ss_pred ccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcCChhhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 36888999999999999999999999999999998 5999999998864311110 000 0011233445699999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+++
T Consensus 104 v~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv 183 (260)
T PRK07657 104 INGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEIGLVEFVV 183 (260)
T ss_pred EcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCCeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|++++++++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .++++++++++|++|+.
T Consensus 184 ~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~e~~~af~~~r~ 254 (260)
T PRK07657 184 PAHLLEEKAIEIAEKIASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTI-PTKDRLEGLQAFKEKRK 254 (260)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh-cCHhHHHHHHHHhcCCC
Confidence 999999999999999999999999999999998887889999999999898888 79999999999999874
No 57
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-38 Score=336.86 Aligned_cols=226 Identities=16% Similarity=0.260 Sum_probs=201.6
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc-ccc----ccc--cccccccccCCCCE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG-ISR----FTD--EKSYCMPLYCKIPV 653 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~-~~~----~~~--~~~~~~~~~~~kp~ 653 (829)
..|++|.+|+.+|.+++++++ |+++|+|||+|.|++||+|+|++++...... ... ... ...+..+..+||||
T Consensus 24 ~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPv 102 (262)
T PRK08140 24 KLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLGESIETFYNPLVRRLRALPLPV 102 (262)
T ss_pred ccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhccccccchhhHHHHHHHHHHHHHHHHhCCCCE
Confidence 358899999999999999999 9999999999999999999999886422100 000 000 11123344599999
Q ss_pred EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396 654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM 733 (829)
Q Consensus 654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~ 733 (829)
||+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|..++++++++|++++++||+++||||
T Consensus 103 Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~ 182 (262)
T PRK08140 103 IAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARALGLALLGEKLSAEQAEQWGLIW 182 (262)
T ss_pred EEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+|+|.+++++++.+++++|+..+|.+++.+|+.++......++..++.|...+...+ .+++.++++.+|++|+.
T Consensus 183 ~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~e~~~af~~kr~ 256 (262)
T PRK08140 183 RVVDDAALADEAQQLAAHLATQPTRGLALIKQAMNASATNTLDAQLDLERDLQREAG-RSADYAEGVSAFLEKRA 256 (262)
T ss_pred EeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999998888889999999998888888 79999999999999874
No 58
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-38 Score=334.36 Aligned_cols=224 Identities=18% Similarity=0.319 Sum_probs=198.7
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc--cccccccccccCCCCEEEEec
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF--TDEKSYCMPLYCKIPVIAAMQ 658 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~kp~Iaav~ 658 (829)
+.|++|.+|+++|.++++.++.|+++|+|||+|.|++||+|.|++++.........+ .....+..+..+||||||+||
T Consensus 26 ~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~ 105 (251)
T PRK06023 26 KKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAMGGTSFGSEILDFLIALAEAEKPIVSGVD 105 (251)
T ss_pred cccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhccccchhhHHHHHHHHHHHHhCCCCEEEEeC
Confidence 368899999999999999999999999999999999999999999875422111111 111223344569999999999
Q ss_pred ccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396 659 GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR 738 (829)
Q Consensus 659 G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~ 738 (829)
|+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|+.++++++++|++++++||+++|||++|+|.
T Consensus 106 G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~ 185 (251)
T PRK06023 106 GLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQRAFALLALGEGFSAEAAQEAGLIWKIVDE 185 (251)
T ss_pred CceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHHHHHHHHHhCCCCCHHHHHHcCCcceeeCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhh
Q psy11396 739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDK 806 (829)
Q Consensus 739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k 806 (829)
+++++++.+++++|+..+|.+++.+|++++... ..++..++.|...+...+ .++++++++++|++|
T Consensus 186 ~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~-~~l~~~~~~e~~~~~~~~-~~~~~~e~~~af~e~ 251 (251)
T PRK06023 186 EAVEAETLKAAEELAAKPPQALQIARDLMRGPR-EDILARIDEEAKHFAARL-KSAEARAAFEAFMRR 251 (251)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHh-CCHHHHHHHHHHhcC
Confidence 999999999999999999999999999998764 467888888888788888 799999999999984
No 59
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.3e-38 Score=337.83 Aligned_cols=226 Identities=18% Similarity=0.249 Sum_probs=201.6
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc--cccc---ccc--cccccccccCCCCEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK--GISR---FTD--EKSYCMPLYCKIPVI 654 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~--~~~~---~~~--~~~~~~~~~~~kp~I 654 (829)
.|+++.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++..... .... +.. ...+..+..+|||||
T Consensus 38 ~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI 117 (277)
T PRK08258 38 KNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPELLAFTRMTGDLVKAMRACPQPII 117 (277)
T ss_pred ccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccccChhHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 488899999999999999999999999999999999999999988642111 0000 000 112334456999999
Q ss_pred EEecccccchhhhhhhccccccccccceeccccccccccC-CCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396 655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTP-GAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM 733 (829)
Q Consensus 655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p-~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~ 733 (829)
|+|||+|+|||++|+++|||||++++++|++||+++|++| ++|++++|++++|..++++++++|++++++||+++||||
T Consensus 118 AaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~ 197 (277)
T PRK08258 118 AAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQGRASELLYTGRSMSAEEGERWGFFN 197 (277)
T ss_pred EEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCc
Confidence 9999999999999999999999999999999999999995 678899999999999999999999999999999999999
Q ss_pred cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+|+|.+++++++.+++++|+..+|.+++.+|+.++..+...+++.++.|...+...+ .++++++++++|++|+.
T Consensus 198 ~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~eg~~af~ekr~ 271 (277)
T PRK08258 198 RLVEPEELLAEAQALARRLAAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICM-QTEDFRRAYEAFVAKRK 271 (277)
T ss_pred EecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999998888889999999999998888 79999999999999874
No 60
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.2e-38 Score=334.65 Aligned_cols=226 Identities=17% Similarity=0.248 Sum_probs=198.3
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc--ccccc----ccccccccccCCCCEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG--ISRFT----DEKSYCMPLYCKIPVI 654 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~--~~~~~----~~~~~~~~~~~~kp~I 654 (829)
..|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... ..... ....+..+..+|||||
T Consensus 24 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI 103 (262)
T PRK05995 24 VRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYSDDENRADARRLADMLRAIYRCPKPVI 103 (262)
T ss_pred cccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccCchhhhhHHHHHHHHHHHHHcCCCCEE
Confidence 46889999999999999999999999999999999999999999886432111 00000 0112233445999999
Q ss_pred EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396 655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP 734 (829)
Q Consensus 655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~ 734 (829)
|+|||+|+|||++|+++|||||++++++|++||+++|++|++++. ++++++|+.++++++++|++|+++||+++||||+
T Consensus 104 aav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~ 182 (262)
T PRK05995 104 ARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISP-YVIRAMGERAARRYFLTAERFDAAEALRLGLVHE 182 (262)
T ss_pred EEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHH-HHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCe
Confidence 999999999999999999999999999999999999999988765 5889999999999999999999999999999999
Q ss_pred ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHH-HHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTI-FLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|+|.+++.+++.+++++|+..+|.+++.+|+.++......+.+. ++.|...+...+ .++++++++++|++|+.
T Consensus 183 vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~e~~~af~~kr~ 256 (262)
T PRK05995 183 VVPAEALDAKVDELLAALVANSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIR-ATEEAREGVAAFLEKRK 256 (262)
T ss_pred ecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHh-cCHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999998777777777 777777777777 78999999999999874
No 61
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=100.00 E-value=2.2e-38 Score=335.52 Aligned_cols=225 Identities=17% Similarity=0.228 Sum_probs=194.9
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc--ccc----cccccccccccCCCCEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI--SRF----TDEKSYCMPLYCKIPVIA 655 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~--~~~----~~~~~~~~~~~~~kp~Ia 655 (829)
.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++....... ... .....+..+..+||||||
T Consensus 27 ~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIa 106 (265)
T PRK05674 27 NNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSADLDYNTNLDDARELAELMYNLYRLKIPTLA 106 (265)
T ss_pred ccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhcccccchhhhHHHHHHHHHHHHHHcCCCCEEE
Confidence 57789999999999999999999999999999999999999998864321100 000 011123334459999999
Q ss_pred EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV 735 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v 735 (829)
+|||+|+|||++|+++|||||++++++|++||+++|++|++++. ++++++|..++++++++|+.|+++||+++|||++|
T Consensus 107 aV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~-~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~v 185 (265)
T PRK05674 107 VVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISP-FVVKAIGERAARRYALTAERFDGRRARELGLLAES 185 (265)
T ss_pred EEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHH-HHHHHhCHHHHHHHHHhCcccCHHHHHHCCCccee
Confidence 99999999999999999999999999999999999999987765 58899999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHH-HHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHEL-TMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+|.+++.+++.+++++|+..+|.+++.+|+.++......+++.++.+. ..+...+ .+++.++++++|++|+.
T Consensus 186 v~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~-~s~d~~e~~~af~~kr~ 258 (265)
T PRK05674 186 YPAAELEAQVEAWIANLLLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIR-VSAEGQEGLRAFLEKRT 258 (265)
T ss_pred cCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHh-cCHHHHHHHHHHHccCC
Confidence 999999999999999999999999999999999888777777776543 4555566 79999999999999873
No 62
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=100.00 E-value=3.3e-38 Score=333.95 Aligned_cols=226 Identities=18% Similarity=0.304 Sum_probs=199.1
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccccccc--ccccccccccCCCCEEEEec
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISRFT--DEKSYCMPLYCKIPVIAAMQ 658 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~kp~Iaav~ 658 (829)
.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.........+. ....+..+..+||||||+||
T Consensus 23 ~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~ 102 (261)
T PRK03580 23 ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFDLDKPVIAAVN 102 (261)
T ss_pred ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccCcchhhhhhhhhHHHHHHHhCCCCEEEEEC
Confidence 4888999999999999999999999999999998 79999999998653211111110 11122334559999999999
Q ss_pred ccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396 659 GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR 738 (829)
Q Consensus 659 G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~ 738 (829)
|+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++|||++|+|+
T Consensus 103 G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~ 182 (261)
T PRK03580 103 GYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIANEMVMTGRRMDAEEALRWGIVNRVVPQ 182 (261)
T ss_pred CeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCcEecCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHH----HHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELT----MHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~----~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+++++++.+++++|+..+|.+++.+|+.++......+++.++.|.. .+...+ .+++.++++++|++|+.
T Consensus 183 ~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~d~~e~~~af~ekr~ 255 (261)
T PRK03580 183 AELMDRARELAQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPSVL-HSEDALEGPRAFAEKRD 255 (261)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHh-cCccHHHHHHHHhcCCC
Confidence 9999999999999999999999999999998877788888887763 555666 79999999999999874
No 63
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=100.00 E-value=2.2e-38 Score=334.67 Aligned_cols=225 Identities=18% Similarity=0.228 Sum_probs=193.5
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhc-ccc---cccccccccccccCCCCEEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQK-GIS---RFTDEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~-~~~---~~~~~~~~~~~~~~~kp~Iaa 656 (829)
.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..... ... .......+..+..+||||||+
T Consensus 24 ~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 103 (259)
T TIGR01929 24 RNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGYIDDSGVHRLNVLDVQRQIRTCPKPVIAM 103 (259)
T ss_pred ccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhccccchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4788999999999999999999999999999998 79999999987532110 000 000011223345599999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++|||||++++++|++||+++|++|+++++++|++++|+.++++++++|++++++||+++||||+|+
T Consensus 104 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv 183 (259)
T TIGR01929 104 VNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAEQALDMGLVNTVV 183 (259)
T ss_pred EcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHHHHHHHhCCccCHHHHHHcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|++++.+++.+++++|+..+|.+++.+|++++..... .......|...+...+ .+++.++++++|++|+.
T Consensus 184 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~-~~~d~~egi~af~~kr~ 253 (259)
T TIGR01929 184 PLADLEKETVRWCREILQKSPMAIRMLKAALNADCDG-QAGLQELAGNATMLFY-MTEEGQEGRNAFLEKRQ 253 (259)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHh-cCccHHHHHHHHhccCC
Confidence 9999999999999999999999999999999976543 3444445556666666 78999999999999874
No 64
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.1e-38 Score=334.36 Aligned_cols=226 Identities=20% Similarity=0.327 Sum_probs=202.9
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc-cccc----cc-ccccccccccCCCCEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-GISR----FT-DEKSYCMPLYCKIPVIA 655 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-~~~~----~~-~~~~~~~~~~~~kp~Ia 655 (829)
.|++|.+|+.+|.++++.+++|+++|+|||+|.|+.||+|+|++++..... .... .. ....+..+..+||||||
T Consensus 24 ~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIA 103 (260)
T PRK07511 24 RNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRAKPPSVQAASIDGLHDWIRAIRAFPKPVIA 103 (260)
T ss_pred ccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhcccccchhHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 577899999999999999999999999999999999999999998753211 1000 00 01122334459999999
Q ss_pred EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV 735 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v 735 (829)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+|
T Consensus 104 av~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~v 183 (260)
T PRK07511 104 AVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATELLLEGKPISAERLHALGVVNRL 183 (260)
T ss_pred EECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCccEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+|++++.+++.++++++++.+|.++..+|+.++......+.+.+..|...+...+ .+++.++++++|++++.
T Consensus 184 v~~~~~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~~i~~f~~~r~ 255 (260)
T PRK07511 184 AEPGQALAEALALADQLAAGSPNALARIKSLIADAPEATLAAQLEAERDHFVASL-HHADALEGIAAFLEKRA 255 (260)
T ss_pred eCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhccCC
Confidence 9999999999999999999999999999999998888889999999999999999 79999999999999874
No 65
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=100.00 E-value=3.7e-38 Score=333.79 Aligned_cols=227 Identities=21% Similarity=0.326 Sum_probs=203.9
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccc-ccc-c-ccccccccccCCCCEEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGI-SRF-T-DEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~-~~~-~-~~~~~~~~~~~~kp~Iaa 656 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....... ..+ . ....+..+..+||||||+
T Consensus 24 ~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaa 103 (260)
T PRK05809 24 ALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDLNEEEGRKFGLLGNKVFRKLENLDKPVIAA 103 (260)
T ss_pred ccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhccChHHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35788999999999999999999999999999999 9999999998864321110 000 0 011233455699999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++|||||++++++|++||+++|++|+++++++|++++|+.++++++++|++++++||+++||||+|+
T Consensus 104 v~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv 183 (260)
T PRK05809 104 INGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKAKELIYTGDMINAEEALRIGLVNKVV 183 (260)
T ss_pred EcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|.+++.+.+.+++++|+..+|.+++.+|+.++......+++.++.|...+...+ .++++++++++|++|+.
T Consensus 184 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~egi~af~~~r~ 254 (260)
T PRK05809 184 EPEKLMEEAKALANKIAANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECF-STEDQTEGMTAFVEKRE 254 (260)
T ss_pred ChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999888889999999999999999 79999999999999874
No 66
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.5e-38 Score=333.09 Aligned_cols=226 Identities=17% Similarity=0.202 Sum_probs=198.5
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc-c-ccc---cc-ccccccccccCCCCEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-G-ISR---FT-DEKSYCMPLYCKIPVI 654 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-~-~~~---~~-~~~~~~~~~~~~kp~I 654 (829)
..|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++..... . ... .. ....+..+..+|||||
T Consensus 25 ~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI 104 (262)
T PRK07468 25 KHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTADRATRIEEARRLAMMLKALNDLPKPLI 104 (262)
T ss_pred cccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhcccchhhHHHHHHHHHHHHHHHHcCCCCEE
Confidence 3588899999999999999999999999999999999999999998643111 1 000 00 0112233456999999
Q ss_pred EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396 655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP 734 (829)
Q Consensus 655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~ 734 (829)
|+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++ +.+++|..++++|+++|++++++||+++||||+
T Consensus 105 aav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~-~~~~vG~~~a~~lll~g~~~~a~eA~~~Glv~~ 183 (262)
T PRK07468 105 GRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPY-VVARMGEANARRVFMSARLFDAEEAVRLGLLSR 183 (262)
T ss_pred EEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhh-HHhhccHHHHHHHHHhCCccCHHHHHHcCCcce
Confidence 9999999999999999999999999999999999999999998887 446699999999999999999999999999999
Q ss_pred ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|+|.+++++.+.+++++|++.+|.++..+|++++..+...+++.++.|...+...+ .++++++++++|++|+.
T Consensus 184 v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~s~d~~e~~~af~~kr~ 256 (262)
T PRK07468 184 VVPAERLDAAVEAEVTPYLSCAPGAVAAAKALVRALGAPIDEAVIDATIEALADTW-ETEEAREGIAAFFDKRA 256 (262)
T ss_pred ecCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHh-cCHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999998766667888899988888888 79999999999999884
No 67
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.6e-38 Score=336.12 Aligned_cols=227 Identities=17% Similarity=0.271 Sum_probs=202.2
Q ss_pred ccCCcccccccccccchhhhccccc-ceeeeeeCCCCeeeccCChhhhhhhhccc----c---ccc--ccccccccccCC
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQ-YKVIIITGYENYFACGGTKEGLLKIQKGI----S---RFT--DEKSYCMPLYCK 650 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~-vr~vVl~g~g~~F~~G~D~~~~~~~~~~~----~---~~~--~~~~~~~~~~~~ 650 (829)
..|++|.+|+.+|.++++.++.|++ +|+|||+|.|++||+|+|++++....... . ... ....+..+..+|
T Consensus 24 ~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 103 (266)
T PRK05981 24 VMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGGDAGAALETAYHPFLRRLRNLP 103 (266)
T ss_pred cccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhcccccccccchhHHHHHHHHHHHHHHHHhCC
Confidence 5688999999999999999998764 99999999999999999999875321110 0 000 011223345699
Q ss_pred CCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcC
Q psy11396 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERG 730 (829)
Q Consensus 651 kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~G 730 (829)
|||||+|||+|+|||++|+++|||||++++++|++||.++|++|++|++++|++++|+.++++++++|++++++||+++|
T Consensus 104 kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~G 183 (266)
T PRK05981 104 CPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKARAMELSLLGEKLPAETALQWG 183 (266)
T ss_pred CCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHHHHHHHHHHhCCCcCHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 731 ISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 731 Lv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
||++++|.+++++++.+++++|+..+|.+++.+|++++......+.+.++.|...+...+ .+++.+|++.+|++|+.
T Consensus 184 lv~~vv~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~-~s~d~~e~~~af~~kr~ 260 (266)
T PRK05981 184 LVNRVVDDAELMAEAMKLAHELANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIAG-KTEDFKEGVGAFLQKRP 260 (266)
T ss_pred CceEeeCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999998877789999999998888888 79999999999999874
No 68
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.9e-38 Score=333.76 Aligned_cols=227 Identities=20% Similarity=0.316 Sum_probs=204.2
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc--cccccccccccCCCCEEEEec
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF--TDEKSYCMPLYCKIPVIAAMQ 658 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~kp~Iaav~ 658 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++.........+ .....+..+..+||||||+||
T Consensus 25 ~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~ 104 (259)
T PRK06688 25 KKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAPPKPPDELAPVNRFLRAIAALPKPVVAAVN 104 (259)
T ss_pred cccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccCcchHHHHHHHHHHHHHHHcCCCCEEEEEC
Confidence 457889999999999999999999999999999999999999999875432211010 011223344559999999999
Q ss_pred ccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396 659 GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR 738 (829)
Q Consensus 659 G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~ 738 (829)
|+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|+.++++++++|++|+++||+++||||+++|+
T Consensus 105 G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~ 184 (259)
T PRK06688 105 GPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARAAEMLLLGEPLSAEEALRIGLVNRVVPA 184 (259)
T ss_pred CeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHHHHHHHHHhCCccCHHHHHHcCCcceecCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+++.+++.+++++|+..+|.+++.+|+.++......+++.+..|...+...+ .+++.++++++|++|+.
T Consensus 185 ~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~~~~af~~~~~ 253 (259)
T PRK06688 185 AELDAEADAQAAKLAAGPASALRYTKRAINAATLTELEEALAREAAGFGRLL-RTPDFREGATAFIEKRK 253 (259)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999998888889999999999999988 78999999999999763
No 69
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.6e-38 Score=330.47 Aligned_cols=223 Identities=17% Similarity=0.294 Sum_probs=199.2
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc-c-cc-ccccccccccCCCCEEEEe
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS-R-FT-DEKSYCMPLYCKIPVIAAM 657 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~kp~Iaav 657 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++........ . .. ....+..+..+||||||+|
T Consensus 23 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav 102 (249)
T PRK05870 23 RRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPGRPAEDGLRRIYDGFLAVASCPLPTIAAV 102 (249)
T ss_pred ccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhcccccchHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 4688999999999999999999999999999999999999999998754221110 0 00 0112233445999999999
Q ss_pred cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396 658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP 737 (829)
Q Consensus 658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~ 737 (829)
||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+++
T Consensus 103 ~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv- 181 (249)
T PRK05870 103 NGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVARAALLFGMRFDAEAAVRHGLALMVA- 181 (249)
T ss_pred CCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHHHHHHHHHhCCccCHHHHHHcCCHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh-CCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhh
Q psy11396 738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQ-KKLSTIFLHELTMHDYTFVNNPSVITNIERYFDK 806 (829)
Q Consensus 738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k 806 (829)
+++.+++.+++++|+..+|.+++.+|+.++.... ..+++.++.|...+...+ .+++++|++++|+++
T Consensus 182 -~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~-~~~d~~eg~~af~~~ 249 (249)
T PRK05870 182 -DDPVAAALELAAGPAAAPRELVLATKASMRATASLAQHAAAVEFELGPQAASV-QSPEFAARLAAAQRR 249 (249)
T ss_pred -hhHHHHHHHHHHHHHhCCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhcC
Confidence 7899999999999999999999999999998877 788999999998888888 799999999999974
No 70
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.2e-38 Score=334.27 Aligned_cols=227 Identities=20% Similarity=0.331 Sum_probs=202.1
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-------ccc------cccccccc
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-------FTD------EKSYCMPL 647 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-------~~~------~~~~~~~~ 647 (829)
+.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++......... +.. ...+..+.
T Consensus 26 ~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 105 (272)
T PRK06210 26 RLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRDTDVRPFVGNRRPDYQTRYHFLT 105 (272)
T ss_pred cccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCcccccccccchhhhhhhhhhHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999987542211000 000 00122344
Q ss_pred cCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396 648 YCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK 727 (829)
Q Consensus 648 ~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~ 727 (829)
.+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+
T Consensus 106 ~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~ 185 (272)
T PRK06210 106 ALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRLVGHANALDLLLSARTFYAEEAL 185 (272)
T ss_pred hCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhhhCHHHHHHHHHcCCccCHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcccccChhhHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhh
Q psy11396 728 ERGISMPVLPRKQVLFYSLKLAKKLSLL-SKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDK 806 (829)
Q Consensus 728 ~~GLv~~v~~~~~l~~~~~~~a~~i~~~-~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k 806 (829)
++||||+++|++++.+++.+++++|+.. +|.++..+|+.++......+++.++.|...+...+ .+++.+|++++|++|
T Consensus 186 ~~Glv~~vv~~~~l~~~a~~~a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~~~~egi~af~~k 264 (272)
T PRK06210 186 RLGLVNRVVPPDELMERTLAYAEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANREMHESL-QRPDFIEGVASFLEK 264 (272)
T ss_pred HcCCcceecCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHh-cCccHHHHHHHHhcc
Confidence 9999999999999999999999999985 99999999999998877889999999998888888 789999999999998
Q ss_pred cc
Q psy11396 807 SI 808 (829)
Q Consensus 807 ~~ 808 (829)
+.
T Consensus 265 r~ 266 (272)
T PRK06210 265 RP 266 (272)
T ss_pred CC
Confidence 73
No 71
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=100.00 E-value=5.3e-38 Score=334.06 Aligned_cols=226 Identities=19% Similarity=0.233 Sum_probs=194.6
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhc-ccc---cccccccccccccCCCCEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQK-GIS---RFTDEKSYCMPLYCKIPVIA 655 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~-~~~---~~~~~~~~~~~~~~~kp~Ia 655 (829)
+.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..... ... .......+..+..+||||||
T Consensus 33 ~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA 112 (273)
T PRK07396 33 VRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGGYVDDDGVPRLNVLDLQRLIRTCPKPVIA 112 (273)
T ss_pred ccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhcccccchhhhhhhHHHHHHHHHHhCCCCEEE
Confidence 46889999999999999999999999999999998 69999999987642110 000 00001112234459999999
Q ss_pred EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV 735 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v 735 (829)
+|||+|+|||++|+++|||||++++++|++||+++|++|+++++++|++++|..++++++++|++|+++||+++||||+|
T Consensus 113 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~a~~l~ltg~~~~A~eA~~~GLv~~v 192 (273)
T PRK07396 113 MVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKAREIWFLCRQYDAQEALDMGLVNTV 192 (273)
T ss_pred EECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHHHHHHHHhCCCcCHHHHHHcCCcCee
Confidence 99999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+|++++++++.+++++|+..+|.+++.+|++++.... ..+...+.|...+...+ .+++++|+|.+|++|+.
T Consensus 193 v~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~-~~~d~~egi~af~~kr~ 263 (273)
T PRK07396 193 VPLADLEKETVRWCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFY-MTEEAQEGRNAFNEKRQ 263 (273)
T ss_pred cCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHh-cChhHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999987654 34444445666666666 78999999999999874
No 72
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.7e-38 Score=329.29 Aligned_cols=222 Identities=18% Similarity=0.206 Sum_probs=196.1
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc----ccccccccccCCCCEEEEe
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT----DEKSYCMPLYCKIPVIAAM 657 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~----~~~~~~~~~~~~kp~Iaav 657 (829)
.|+++.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++........... ....+..+..+||||||+|
T Consensus 22 ~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav 101 (249)
T PRK07938 22 VNALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQATPGFTALIDANRGCFAAFRAVYECAVPVIAAV 101 (249)
T ss_pred cccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhccchhHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 488999999999999999999999999999999999999999988643211010000 0112334556999999999
Q ss_pred cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396 658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP 737 (829)
Q Consensus 658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~ 737 (829)
||+|+|||++|+++||+||++++++|++||+++|++ +++++|++++|+.++++++++|++|+++||+++|||++|+|
T Consensus 102 ~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~ 178 (249)
T PRK07938 102 HGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQHLMRALFFTAATITAAELHHFGSVEEVVP 178 (249)
T ss_pred cCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHHHHHHHHHhCCcCCHHHHHHCCCccEEeC
Confidence 999999999999999999999999999999999986 44568999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396 738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS 807 (829)
Q Consensus 738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~ 807 (829)
++++++++.+++++|+..+|.+++.+|+.++......+++.++.|...+...+ .+++++|++++|++||
T Consensus 179 ~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~d~~eg~~af~ekr 247 (249)
T PRK07938 179 RDQLDEAALEVARKIAAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELN-LAGVSDEHRDAFVEKR 247 (249)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHh-cCccHHHHHHHHHhcC
Confidence 99999999999999999999999999999998777778888888888887777 7999999999999987
No 73
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9.9e-38 Score=332.76 Aligned_cols=227 Identities=19% Similarity=0.254 Sum_probs=194.6
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc-----cc-ccc----ccccccccccCC
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG-----IS-RFT----DEKSYCMPLYCK 650 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~-----~~-~~~----~~~~~~~~~~~~ 650 (829)
+.|++|.+|+.+|.++++++++|+++|+|||+|.|++||+|+|++++...... .. ... ....+..+..+|
T Consensus 30 ~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 109 (276)
T PRK05864 30 RMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEGLTRPTYALRSMELLDDVILALRRLH 109 (276)
T ss_pred cccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhcccccccccchhHHHHHHHHHHHHHHHHHhCC
Confidence 46889999999999999999999999999999999999999999876421100 00 000 011123344599
Q ss_pred CCEEEEecccccchhhhhhhccccccccccceeccccccccccC-CCcceeccccccCHHHHHHHHhcCCccCHHHHHHc
Q psy11396 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTP-GAGSTLIFPQRFGKILSREILFTASEFKGKELKER 729 (829)
Q Consensus 651 kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p-~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~ 729 (829)
|||||+|||+|+|||++|+++||+||++++++|++||+++|++| ++|++++|++++|+.++++++++|++++++||+++
T Consensus 110 kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~A~~l~l~g~~~~a~eA~~~ 189 (276)
T PRK05864 110 QPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVDAEEAERI 189 (276)
T ss_pred CCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhhCHHHHHHHHHcCCccCHHHHHHc
Confidence 99999999999999999999999999999999999999999997 78889999999999999999999999999999999
Q ss_pred CCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhC-CHHHHHHHHHHHHH-hhhcCChHHHHHHHHHHhhc
Q psy11396 730 GISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQK-KLSTIFLHELTMHD-YTFVNNPSVITNIERYFDKS 807 (829)
Q Consensus 730 GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~-~~~~~~~~e~~~~~-~~~~~~~~~~e~~~~~~~k~ 807 (829)
|||++|+|++++++++.+++++|+..+|.+++.+|+.++..... .+++.+..|..... ..+ .+++.++++++|++|+
T Consensus 190 Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~-~~~d~~e~~~af~~kr 268 (276)
T PRK05864 190 GLVSRQVPDEQLLDTCYAIAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRL-LTANFEEAVAARAEKR 268 (276)
T ss_pred CCcceeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhc-cChhHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999876654 67777776654322 244 6899999999999987
Q ss_pred c
Q psy11396 808 I 808 (829)
Q Consensus 808 ~ 808 (829)
.
T Consensus 269 ~ 269 (276)
T PRK05864 269 P 269 (276)
T ss_pred C
Confidence 4
No 74
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=100.00 E-value=8.1e-38 Score=329.76 Aligned_cols=226 Identities=18% Similarity=0.215 Sum_probs=190.5
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccccccc--ccccccccccCCCCEEEEe
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISRFT--DEKSYCMPLYCKIPVIAAM 657 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~kp~Iaav 657 (829)
+.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++........... ....+..+..+||||||+|
T Consensus 22 ~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav 101 (256)
T TIGR03210 22 KMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGGYDGRGTIGLPMEELHSAIRDVPKPVIARV 101 (256)
T ss_pred cccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhccccchhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 35788999999999999999999999999999998 79999999998742111110000 0112334456999999999
Q ss_pred cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396 658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP 737 (829)
Q Consensus 658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~ 737 (829)
||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|+.++++++++|++|+|+||+++||||+|+|
T Consensus 102 ~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~~A~~lll~g~~~~a~eA~~~Glv~~vv~ 181 (256)
T TIGR03210 102 QGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEKKAREIWYLCRRYTAQEALAMGLVNAVVP 181 (256)
T ss_pred CCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHcCCceeeeC
Confidence 99999999999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
.+++.+++.+++++|+..+|.+++.+|++++.......... ..+...+...+ .+++.++++.+|++|+.
T Consensus 182 ~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~-~~~~~~~~~~~-~~~d~~e~~~af~~kr~ 250 (256)
T TIGR03210 182 HDQLDAEVQKWCDEIVEKSPTAIAIAKRSFNMDTAHQRGIA-GMGMYALKLYY-DTAESREGVKAFQEKRK 250 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcccchHH-HHHHHHHHHHc-cChhHHHHHHHHhccCC
Confidence 99999999999999999999999999999987643321111 12334555566 78999999999999874
No 75
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9e-38 Score=331.67 Aligned_cols=222 Identities=18% Similarity=0.335 Sum_probs=189.8
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc---c-cc-ccccccccccCCCCEEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS---R-FT-DEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~---~-~~-~~~~~~~~~~~~kp~Iaa 656 (829)
.|+++.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++........ . .. ....+..+..+||||||+
T Consensus 33 ~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 112 (268)
T PRK07327 33 LNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEMADDFEVRARVWREARDLVYNVINCDKPIVSA 112 (268)
T ss_pred cCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhccCcHHHHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 588899999999999999999999999999999999999999987643211100 0 00 011223344699999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++|||++++
T Consensus 113 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv 192 (268)
T PRK07327 113 IHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMAKAKYYLLLCEPVSGEEAERIGLVSLAV 192 (268)
T ss_pred EcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCcceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhC---CHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQK---KLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|++++++++.+++++|++.+|.+++.+|++++..... .++..+..+ ...+ .+++.++++.+|++|+.
T Consensus 193 ~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~----~~~~-~~~d~~eg~~af~ekr~ 262 (268)
T PRK07327 193 DDDELLPKALEVAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALE----FMGF-SGPDVREGLASLREKRA 262 (268)
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHH----HHHc-cChhHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999865321 233333332 2344 78999999999999874
No 76
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-37 Score=329.72 Aligned_cols=225 Identities=15% Similarity=0.239 Sum_probs=200.3
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--cc-c-ccccccccccCCCCEEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RF-T-DEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~~-~-~~~~~~~~~~~~kp~Iaa 656 (829)
..|+++.+|+.+|.++++.+ +|+++|+||++|.|+.||+|+|++++........ .+ . ....+..+..+||||||+
T Consensus 26 ~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~pvIaa 104 (260)
T PRK07659 26 ALNALDEPMLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSSNDESKFDGVMNTISEIVVTLYTMPKLTISA 104 (260)
T ss_pred cccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhccCchhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 46889999999999999999 5889999999999999999999998753211110 00 0 011223344599999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|+.++++||+++||||+++
T Consensus 105 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv 184 (260)
T PRK07659 105 IHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQIIWEGKKLSATEALDLGLIDEVI 184 (260)
T ss_pred ecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHHHHHHHHHhCCccCHHHHHHcCChHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
++++.+++.+++++|++.+|.+++.+|+.++......+++.++.|...+...+ .+++.+|++.+|++|+.
T Consensus 185 -~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~~~~egi~af~~kr~ 254 (260)
T PRK07659 185 -GGDFQTAAKQKISEWLQKPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMR-QTADHKEGIRAFLEKRL 254 (260)
T ss_pred -hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cCHhHHHHHHHHhcCCC
Confidence 78899999999999999999999999999998877889999999999888888 78999999999999874
No 77
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.1e-37 Score=327.23 Aligned_cols=222 Identities=44% Similarity=0.802 Sum_probs=200.9
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccc
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA 661 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a 661 (829)
.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|+|+.++.........+.....+..+..+||||||+|||+|
T Consensus 26 ~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a 105 (249)
T PRK07110 26 KNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQTGKGTFTEANLYSLALNCPIPVIAAMQGHA 105 (249)
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhccchhhhHhhHHHHHHHHcCCCCEEEEecCce
Confidence 58899999999999999999999999999999999999999998875432221111112233445569999999999999
Q ss_pred cchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhH
Q psy11396 662 IGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQV 741 (829)
Q Consensus 662 ~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l 741 (829)
+|||++|+++||+||++++++|++||+++|++|+++++++|++++|+.++++++++|++|+++||+++|||++|+|++++
T Consensus 106 ~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l 185 (249)
T PRK07110 106 IGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLALGQEMLLTARYYRGAELKKRGVPFPVLPRAEV 185 (249)
T ss_pred echHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCeEEeChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHH
Q psy11396 742 LFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF 804 (829)
Q Consensus 742 ~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~ 804 (829)
.+++.+++++|++.++.+++.+|+.++......+++.++.|...+...+ .+++.+|+|.++-
T Consensus 186 ~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~~~~egi~~~~ 247 (249)
T PRK07110 186 LEKALELARSLAEKPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTF-HQPEVKRRIESLY 247 (249)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHh-CCHhHHHHHHHhc
Confidence 9999999999999999999999999999988899999999999999999 7999999998763
No 78
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=100.00 E-value=4.4e-38 Score=330.87 Aligned_cols=225 Identities=25% Similarity=0.426 Sum_probs=204.8
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc---ccccccccccccCCCCEEEEe
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR---FTDEKSYCMPLYCKIPVIAAM 657 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~---~~~~~~~~~~~~~~kp~Iaav 657 (829)
..|++|.+++.+|.++++.++.|+++++||++|.+++||+|.|+.++......... ......+..+..+||||||+|
T Consensus 18 ~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kp~Iaav 97 (245)
T PF00378_consen 18 KRNALNPEMLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNSDEEEAREFFRRFQELLSRLANFPKPTIAAV 97 (245)
T ss_dssp GTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhccccccccccchhhccccccchhhhhheeecc
Confidence 57889999999999999999999999999999999999999999888765111111 111223344455999999999
Q ss_pred cccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396 658 QGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP 737 (829)
Q Consensus 658 ~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~ 737 (829)
||+|+|||++|+++|||||++++++|++||+++|++|+++++++|+|++|+.++++++++|++|+++||+++||||+|+|
T Consensus 98 ~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~ 177 (245)
T PF00378_consen 98 NGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPSRARELLLTGEPISAEEALELGLVDEVVP 177 (245)
T ss_dssp SSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHHHHHHHHHHTCEEEHHHHHHTTSSSEEES
T ss_pred cccccccccccccccceEEeecccceeeeecccCcccccccccccceeeecccccccccccccchhHHHHhhcceeEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhh
Q psy11396 738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDK 806 (829)
Q Consensus 738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k 806 (829)
++++.+++.+++++++..++.+++.+|+.++......+++.++.+...+...+ .+++++|++++|+||
T Consensus 178 ~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~f~eK 245 (245)
T PF00378_consen 178 DEELDEEALELAKRLAAKPPSALRATKKALNRALEQSLEEALEFEQDLFAECF-KSEDFQEGIAAFLEK 245 (245)
T ss_dssp GGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH-TSHHHHHHHHHHHTT
T ss_pred chhhhHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHc-CCHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999988889999999999999999 899999999999997
No 79
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=100.00 E-value=1.8e-37 Score=325.60 Aligned_cols=222 Identities=13% Similarity=0.256 Sum_probs=188.8
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc-ccccccccccCCCCEEEEeccc
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT-DEKSYCMPLYCKIPVIAAMQGH 660 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~kp~Iaav~G~ 660 (829)
.|++|.+|+.+|.++++.+++|+++|+|||+|.|++||+|.|+.++..... ..... ....+..+..+||||||+|||+
T Consensus 21 ~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~-~~~~~~~~~~~~~l~~~~kPvIaav~G~ 99 (251)
T TIGR03189 21 ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMPDQC-AAMLASLHKLVIAMLDSPVPILVAVRGQ 99 (251)
T ss_pred cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCchhH-HHHHHHHHHHHHHHHhCCCCEEEEecCe
Confidence 588999999999999999999999999999999999999999987532110 00010 1112334556999999999999
Q ss_pred ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396 661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740 (829)
Q Consensus 661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~ 740 (829)
|+|||++|+++|||||++++++|++||+++|++|++ ++++|++++|..++++++++|++++++||+++|||++|+|+.+
T Consensus 100 a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~-~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~~~~ 178 (251)
T TIGR03189 100 CLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAPA-ASCLLPERMGRVAAEDLLYSGRSIDGAEGARIGLANAVAEDPE 178 (251)
T ss_pred eeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCc-hHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCcceecCcHH
Confidence 999999999999999999999999999999999874 5778999999999999999999999999999999999998543
Q ss_pred HHHHHHHH-HHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHH-HHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 741 VLFYSLKL-AKKLSLLSKKELELQKKYYSHSLQKKLSTIFL-HELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 741 l~~~~~~~-a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+++.++ +++|+..+|.+++.+|++++..+...+++.+. .|...+...+ .+++.+|++++|++|+.
T Consensus 179 --~~a~~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~-~s~d~~eg~~af~ekr~ 245 (251)
T TIGR03189 179 --NAALAWFDEHPAKLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELM-ATHDAVEGLNAFLEKRP 245 (251)
T ss_pred --HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHh-CCHhHHHHHHHHHhcCC
Confidence 456665 69999999999999999999887777776653 5666667777 79999999999999884
No 80
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.2e-37 Score=329.51 Aligned_cols=223 Identities=16% Similarity=0.235 Sum_probs=192.9
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccc--ccc--ccccccccccCCCCEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGIS--RFT--DEKSYCMPLYCKIPVIA 655 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~--~~~--~~~~~~~~~~~~kp~Ia 655 (829)
..|++|.+|+++|.++++++++|+++|+|||+|.| ++||+|+|++++........ .+. ....+..+..+||||||
T Consensus 28 ~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIa 107 (262)
T PRK06144 28 ARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFSTAEDAVAYERRIDRVLGALEQLRVPTIA 107 (262)
T ss_pred ccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhccchhHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 35888999999999999999999999999999998 79999999988653211110 000 11122334459999999
Q ss_pred Eecccccchhhhhhhccccccccccceecccccc-ccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMR-YGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP 734 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~-~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~ 734 (829)
+|||+|+|||++|+++|||||++++++|++||++ +|++|++|++++|++++|+.++++++++|++|+++||+++||||+
T Consensus 108 av~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~ 187 (262)
T PRK06144 108 AIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLGAARVKDMLFTARLLEAEEALAAGLVNE 187 (262)
T ss_pred EECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCCcCe
Confidence 9999999999999999999999999999999997 999999999999999999999999999999999999999999999
Q ss_pred ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|+|++++++++++++++|+..+|.+++.+|+.++......+ +.+...+...+ .++++++++.+|++|+.
T Consensus 188 vv~~~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~l----~~~~~~~~~~~-~~~~~~e~~~af~~kr~ 256 (262)
T PRK06144 188 VVEDAALDARADALAELLAAHAPLTLRATKEALRRLRREGL----PDGDDLIRMCY-MSEDFREGVEAFLEKRP 256 (262)
T ss_pred ecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcCH----HHHHHHHHHHh-cChHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999987654433 33445666666 79999999999999874
No 81
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.8e-37 Score=327.58 Aligned_cols=223 Identities=21% Similarity=0.337 Sum_probs=197.6
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccc-c----ccccccccccCCCCEEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRF-T----DEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~-~----~~~~~~~~~~~~kp~Iaa 656 (829)
.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++.......... . ....+..+..+||||||+
T Consensus 24 ~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 103 (257)
T PRK06495 24 VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVIKGPGDLRAHNRRTRECFHAIRECAKPVIAA 103 (257)
T ss_pred cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhccCCchhHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 47889999999999999999999999999999999999999998864321110000 0 011223345699999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++||+||++++++|++||+++|+. ++++++++++|+.++++++++|++++++||+++||||+++
T Consensus 104 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~~a~~lll~g~~~~a~eA~~~GLv~~vv 180 (257)
T PRK06495 104 VNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLTRRMMLTGYRVPAAELYRRGVIEACL 180 (257)
T ss_pred ECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHHHHHHHHHcCCeeCHHHHHHcCCcceec
Confidence 9999999999999999999999999999999999996 4467799999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|++++.+++.+++++|+..+|.+++.+|++++......+++.++.|...+...+ .++++++++++|++|+.
T Consensus 181 ~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~egi~af~~kr~ 251 (257)
T PRK06495 181 PPEELMPEAMEIAREIASKSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLA-KTEDAKEAQRAFLEKRP 251 (257)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cChHHHHHHHHHhccCC
Confidence 999999999999999999999999999999998877889999999988888888 79999999999999874
No 82
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-37 Score=333.49 Aligned_cols=227 Identities=18% Similarity=0.196 Sum_probs=194.1
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc-c-------------ccc-c-cc----c
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-G-------------ISR-F-TD----E 640 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-~-------------~~~-~-~~----~ 640 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++..... . ... . .. .
T Consensus 24 ~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (296)
T PRK08260 24 KLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTPVEADEEDRADPSDDGVRDGGG 103 (296)
T ss_pred ccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhcccccccccccccccccccchhHHHHHHHHH
Confidence 4588899999999999999999999999999999999999999988642100 0 000 0 00 0
Q ss_pred ccccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCc
Q psy11396 641 KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASE 720 (829)
Q Consensus 641 ~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~ 720 (829)
..+..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|+++++++|++++|..++++++++|++
T Consensus 104 ~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~llltg~~ 183 (296)
T PRK08260 104 RVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGLQTALEWVYSGRV 183 (296)
T ss_pred HHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchhhhHHHhhCHHHHHHHHHcCCc
Confidence 12233445999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhhhhC-CHHHHHHHHHHHHHhhhcCChHHHH
Q psy11396 721 FKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLL-SKKELELQKKYYSHSLQK-KLSTIFLHELTMHDYTFVNNPSVIT 798 (829)
Q Consensus 721 ~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~-~~~a~~~~K~~l~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~e 798 (829)
|+++||+++||||+|+|++++.+++.+++++|+.. +|.+++.+|++++..+.. ........|...+...+ .+++++|
T Consensus 184 ~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~e 262 (296)
T PRK08260 184 FDAQEALDGGLVRSVHPPDELLPAARALAREIADNTSPVSVALTRQMMWRMAGADHPMEAHRVDSRAIYSRG-RSGDGKE 262 (296)
T ss_pred cCHHHHHHCCCceeecCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHc-cChhHHH
Confidence 99999999999999999999999999999999985 999999999999977532 12233355666666666 7999999
Q ss_pred HHHHHHhhcc
Q psy11396 799 NIERYFDKSI 808 (829)
Q Consensus 799 ~~~~~~~k~~ 808 (829)
++.+|++|+.
T Consensus 263 gi~af~~kr~ 272 (296)
T PRK08260 263 GVSSFLEKRP 272 (296)
T ss_pred HHHHHhcCCC
Confidence 9999999885
No 83
>PLN02921 naphthoate synthase
Probab=100.00 E-value=2.3e-37 Score=334.24 Aligned_cols=226 Identities=18% Similarity=0.182 Sum_probs=192.8
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcc-cccc---cccccccccccCCCCEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKG-ISRF---TDEKSYCMPLYCKIPVIA 655 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~-~~~~---~~~~~~~~~~~~~kp~Ia 655 (829)
..|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++.+...... .... ........+..+||||||
T Consensus 87 ~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIA 166 (327)
T PLN02921 87 RRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDGYVGPDDAGRLNVLDLQIQIRRLPKPVIA 166 (327)
T ss_pred CCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhcccccchhHHHHHHHHHHHHHHHhCCCCEEE
Confidence 35889999999999999999999999999999998 799999999876421100 0000 001112334459999999
Q ss_pred EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV 735 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v 735 (829)
+|||+|+|||++|+++||+||++++++|++||+++|++|.++++++|++++|..++++++++|+.|+|+||+++||||+|
T Consensus 167 aVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~~~A~ellltG~~~~A~eA~~~GLV~~v 246 (327)
T PLN02921 167 MVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQKKAREMWFLARFYTASEALKMGLVNTV 246 (327)
T ss_pred EECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+|.+++++++.+++++|+..+|.+++.+|++++..... .......+...+...+ .+++++|++++|++|+.
T Consensus 247 v~~~~l~~~a~~~a~~la~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~-~s~d~~egi~Af~ekr~ 317 (327)
T PLN02921 247 VPLDELEGETVKWCREILRNSPTAIRVLKSALNAADDG-HAGLQELGGNATLLFY-GSEEGNEGRTAYLEGRA 317 (327)
T ss_pred eCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHh-cCHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999876543 3333333345556666 79999999999999874
No 84
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.6e-37 Score=322.50 Aligned_cols=223 Identities=18% Similarity=0.187 Sum_probs=196.0
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH 660 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~ 660 (829)
..|+++.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++...............+..+..+||||||+|||+
T Consensus 20 ~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~ 99 (248)
T PRK06072 20 KLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPDFAIDLRETFYPIIREIRFSDKIYISAINGV 99 (248)
T ss_pred cccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhhhHHHHHHHHHHHHHHHHhCCCCEEEEECCe
Confidence 46889999999999999999999999999999999999999999876432110000001112233445999999999999
Q ss_pred ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396 661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740 (829)
Q Consensus 661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~ 740 (829)
|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|. ++++++++|++|+++||+++||||++ ++
T Consensus 100 a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g~-~a~~lll~g~~~~a~eA~~~Glv~~~---~~ 175 (248)
T PRK06072 100 TAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQ-RFYEILVLGGEFTAEEAERWGLLKIS---ED 175 (248)
T ss_pred eehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhhH-HHHHHHHhCCccCHHHHHHCCCcccc---ch
Confidence 999999999999999999999999999999999999999999999996 89999999999999999999999964 46
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+.+++.+++++|+..||.+++.+|++++......+++.++.|...+...+ .+++.++++++|++|+.
T Consensus 176 ~~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~d~~eg~~af~~kr~ 242 (248)
T PRK06072 176 PLSDAEEMANRISNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLG-KTEDFKEGISSFKEKRE 242 (248)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHh-CChhHHHHHHHHhcCCC
Confidence 78899999999999999999999999998877888999999998888888 79999999999999874
No 85
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=100.00 E-value=4.2e-37 Score=324.99 Aligned_cols=226 Identities=16% Similarity=0.236 Sum_probs=195.3
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCC--CCeeeccCChhhhhhhhcccccc--cccccccccccCCCCEEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGY--ENYFACGGTKEGLLKIQKGISRF--TDEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~--g~~F~~G~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~kp~Iaa 656 (829)
..|++|.+|+.+|.++++.+++|+ +|+|||+|. |++||+|+|++++.........+ .....+..+..+||||||+
T Consensus 24 ~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaa 102 (261)
T PRK11423 24 KRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGGRDPLSYDDPLRQILRMIQKFPKPVIAM 102 (261)
T ss_pred ccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhccccHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 358889999999999999999887 999999996 38999999998864321111010 0111233345599999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++||+||++++++|++||+++|++|++++++++++++|+.++++++++|++++++||+++||||+|+
T Consensus 103 v~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~GLv~~vv 182 (261)
T PRK11423 103 VEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHIVKEMFFTASPITAQRALAVGILNHVV 182 (261)
T ss_pred EecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHHHHHHHHHcCCCcCHHHHHHcCCcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh-CCH-HHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQ-KKL-STIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~-~~~-~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
|++++++++.+++++|+..+|.+++.+|+.++.... ... +..++.+...+...+ .+++.++++.+|++|+.
T Consensus 183 ~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~d~~eg~~af~~kr~ 255 (261)
T PRK11423 183 EVEELEDFTLQMAHHISEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRAVY-DSEDYQEGMNAFLEKRK 255 (261)
T ss_pred CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHh-CChhHHHHHHHHhccCC
Confidence 999999999999999999999999999999986543 233 567777777778888 79999999999999874
No 86
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.6e-37 Score=325.30 Aligned_cols=224 Identities=17% Similarity=0.218 Sum_probs=198.5
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc-cccc-c--------cccccccccCC
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI-SRFT-D--------EKSYCMPLYCK 650 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~-~~~~-~--------~~~~~~~~~~~ 650 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++.+....... .... . ...+..+..+|
T Consensus 23 ~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (262)
T PRK07509 23 KMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSPGNAVKLLFKRLPGNANLAQRVSLGWRRLP 102 (262)
T ss_pred cccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhcccchhhhhHhhhhHHHHHHHHHHHHHHHhCC
Confidence 568899999999999999999999999999999999999999998875321110 0000 0 00111234599
Q ss_pred CCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcC
Q psy11396 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERG 730 (829)
Q Consensus 651 kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~G 730 (829)
|||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|++++++||+++|
T Consensus 103 kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~l~ltg~~~~a~eA~~~G 182 (262)
T PRK07509 103 VPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRKDVARELTYTARVFSAEEALELG 182 (262)
T ss_pred CCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396 731 ISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS 807 (829)
Q Consensus 731 Lv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~ 807 (829)
|||++++ ++.+++.+++++|+..+|.++..+|++++..+...+.+.+..|...+...+ .++++++++.+|++|+
T Consensus 183 lv~~vv~--~~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~e~~~af~ekr 256 (262)
T PRK07509 183 LVTHVSD--DPLAAALALAREIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLL-LGKNQKIAVKAQMKKR 256 (262)
T ss_pred Chhhhhc--hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhcCC
Confidence 9999995 467899999999999999999999999999888888899999988888888 7999999999999986
No 87
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.7e-37 Score=322.10 Aligned_cols=227 Identities=18% Similarity=0.234 Sum_probs=197.6
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-ccccccccccccCCCCEEEEecc
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-FTDEKSYCMPLYCKIPVIAAMQG 659 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~kp~Iaav~G 659 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++......... ......+..+..+|||+||+|||
T Consensus 24 ~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G 103 (258)
T PRK06190 24 ARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGDGSAYGAQDALPNPSPAWPAMRKPVIGAING 103 (258)
T ss_pred ccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccchhhHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 35889999999999999999999999999999999999999999987532111100 01111223345599999999999
Q ss_pred cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396 660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRK 739 (829)
Q Consensus 660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~ 739 (829)
+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|+.++++++++|++|+++||+++||||+++|++
T Consensus 104 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~ 183 (258)
T PRK06190 104 AAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRARRMSLTGDFLDAADALRAGLVTEVVPHD 183 (258)
T ss_pred EeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCeEecCHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcC--ChHHHHHHHHHHhhc
Q psy11396 740 QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVN--NPSVITNIERYFDKS 807 (829)
Q Consensus 740 ~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~--~~~~~e~~~~~~~k~ 807 (829)
++++++.+++++|+..+|.+++.+|+.++......+++.++.|...+...+.+ .....+..++|+.+.
T Consensus 184 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~~~~~~~~~~~~~~~~~ 253 (258)
T PRK06190 184 ELLPRARRLAASIAGNNPAAVRALKASYDDGAAAQTGDALALEAEAARAHNRSVSPDGIAARREAVMARG 253 (258)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999888888999999999999888843 145566666666544
No 88
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=100.00 E-value=1.2e-36 Score=321.73 Aligned_cols=223 Identities=22% Similarity=0.374 Sum_probs=198.7
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhh---hhccccccc-ccccccccccCCCCEEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLK---IQKGISRFT-DEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~---~~~~~~~~~-~~~~~~~~~~~~kp~Iaa 656 (829)
..|++|.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++.+.. ......... ....+..+..+||||||+
T Consensus 25 ~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 104 (257)
T COG1024 25 KLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLSPEDGNAAENLMQPGQDLLRALADLPKPVIAA 104 (257)
T ss_pred cccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhcccchhHHHHHHhHHHHHHHHHHhCCCCEEEE
Confidence 3589999999999999999999999999999999999999999999764 111110000 112344566699999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|+.+++++++||+.|+++||+++|||++++
T Consensus 105 v~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv 184 (257)
T COG1024 105 VNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAKELLLTGEPISAAEALELGLVDEVV 184 (257)
T ss_pred EcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHcCCcCeee
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred Ch-hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q psy11396 737 PR-KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFD 805 (829)
Q Consensus 737 ~~-~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~ 805 (829)
+. +++.+.+++++++++. +|.++..+|+.++......+++....+...+...+ .+++++|++++|++
T Consensus 185 ~~~~~l~~~a~~~a~~~a~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~d~~eg~~a~~~ 252 (257)
T COG1024 185 PDAEELLERALELARRLAA-PPLALAATKRLVRAALEADLAEALEAEALAFARLF-SSEDFREGVRAFLE 252 (257)
T ss_pred CCHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHh-cChhHHHHHHHHHc
Confidence 85 7999999999999998 99999999999998877668888888888888866 78999999999999
No 89
>PRK08321 naphthoate synthase; Validated
Probab=100.00 E-value=1.2e-36 Score=327.65 Aligned_cols=226 Identities=17% Similarity=0.235 Sum_probs=193.2
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCC-------CeeeccCChhhhhhhh----c-c--c--c--ccccc--
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-------NYFACGGTKEGLLKIQ----K-G--I--S--RFTDE-- 640 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-------~~F~~G~D~~~~~~~~----~-~--~--~--~~~~~-- 640 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++.+.... . . . . .....
T Consensus 45 ~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (302)
T PRK08321 45 VRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRDGYQYAEGDEADTVDPARAGRLHI 124 (302)
T ss_pred cccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccccccccccccccchhhhHHHHHHH
Confidence 35888999999999999999999999999999998 5999999998653110 0 0 0 0 00000
Q ss_pred -ccccccccCCCCEEEEecccccchhhhhhhcccccccc-ccceeccccccccccCCCcceeccccccCHHHHHHHHhcC
Q psy11396 641 -KSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFS-EESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTA 718 (829)
Q Consensus 641 -~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~-~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g 718 (829)
.....+..+||||||+|||+|+|||++|+++|||||++ ++++|++||+++|++|+++++++|++++|..++++++++|
T Consensus 125 ~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~~~~~L~r~vG~~~A~~l~ltG 204 (302)
T PRK08321 125 LEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLG 204 (302)
T ss_pred HHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCCchHHHHHHHHhCHHHHHHHHHcC
Confidence 01122345999999999999999999999999999999 6899999999999999999999999999999999999999
Q ss_pred CccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHH
Q psy11396 719 SEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVIT 798 (829)
Q Consensus 719 ~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e 798 (829)
++++|+||+++|||+++||.+++++++.+++++|+..++.+++.+|++++.... ........|...+...+ .+++.++
T Consensus 205 ~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~-~~~d~~e 282 (302)
T PRK08321 205 RTYSAEEAHDMGAVNAVVPHAELETEALEWAREINGKSPTAMRMLKYAFNLTDD-GLVGQQLFAGEATRLAY-MTDEAQE 282 (302)
T ss_pred CccCHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc-ccHHHHHHHHHHHHHHh-cCHHHHH
Confidence 999999999999999999999999999999999999999999999999987654 34444556777777777 7999999
Q ss_pred HHHHHHhhcc
Q psy11396 799 NIERYFDKSI 808 (829)
Q Consensus 799 ~~~~~~~k~~ 808 (829)
++.+|++|+.
T Consensus 283 gi~af~ekr~ 292 (302)
T PRK08321 283 GRDAFLEKRD 292 (302)
T ss_pred HHHHHhccCC
Confidence 9999999874
No 90
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-36 Score=317.24 Aligned_cols=218 Identities=17% Similarity=0.251 Sum_probs=190.0
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH 660 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~ 660 (829)
..|++|.+|+.+|.+++++++++ ++|+|||||.|++||+|+|++........ .......+..+..+||||||+|||+
T Consensus 20 ~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~--~~~~~~~~~~l~~~~kP~Iaav~G~ 96 (243)
T PRK07854 20 RRNALNAELCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVYADDF--PDALIEMLHAIDAAPVPVIAAINGP 96 (243)
T ss_pred cccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccchhHHHH--HHHHHHHHHHHHhCCCCEEEEecCc
Confidence 46889999999999999999865 89999999999999999999752111000 0001112333446999999999999
Q ss_pred ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhh
Q psy11396 661 AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQ 740 (829)
Q Consensus 661 a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~ 740 (829)
|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|+.++++++++|++|+++||+++|||++|++
T Consensus 97 a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~--- 173 (243)
T PRK07854 97 AIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAMLLGAEKLTAEQALATGMANRIGT--- 173 (243)
T ss_pred ccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCcccccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 741 VLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 741 l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+. ++.+++++|+..+|.++..+|+.++.. ..+++.++.|...+...+ .+++.++++.+|++|+.
T Consensus 174 ~~-~a~~~a~~l~~~~~~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~-~~~d~~eg~~af~~kr~ 237 (243)
T PRK07854 174 LA-DAQAWAAEIAGLAPLALQHAKRVLNDD--GAIEEAWPAHKELFDKAW-ASQDAIEAQVARIEKRP 237 (243)
T ss_pred HH-HHHHHHHHHHhCCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHh-cCchHHHHHHHHhCCCC
Confidence 33 789999999999999999999999875 568888888988888888 78999999999999874
No 91
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.4e-36 Score=319.76 Aligned_cols=223 Identities=15% Similarity=0.135 Sum_probs=196.0
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc----cc-c-ccccccccccCCCCEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS----RF-T-DEKSYCMPLYCKIPVIA 655 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~----~~-~-~~~~~~~~~~~~kp~Ia 655 (829)
.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++........ .+ . ....+..+..+||||||
T Consensus 27 ~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIa 106 (260)
T PRK07827 27 RNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGGGDPYDAAVARAREMTALLRAIVELPKPVIA 106 (260)
T ss_pred cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhcccCchhHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 488899999999999999999999999999999999999999998653211100 00 0 01122334459999999
Q ss_pred EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV 735 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v 735 (829)
+|||+|+|||++|+++|||||++++++|++||+++|++|++++++++++++ ..++++++++|++++++||+++|||+++
T Consensus 107 av~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~-~~~a~~l~l~g~~~~a~eA~~~Glv~~v 185 (260)
T PRK07827 107 AIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLS-PRAAARYYLTGEKFGAAEAARIGLVTAA 185 (260)
T ss_pred EEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhh-HHHHHHHHHhCCccCHHHHHHcCCcccc
Confidence 999999999999999999999999999999999999999999999998875 5699999999999999999999999999
Q ss_pred cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+ +++++.+.+++++|+..++.++..+|++++..+...++..++.+...+...+ .+++.++++++|++|+.
T Consensus 186 ~--~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~af~~kr~ 255 (260)
T PRK07827 186 A--DDVDAAVAALLADLRRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLF-VSDEAREGMTAFLQKRP 255 (260)
T ss_pred h--HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh-cChhHHHHHHHHhcCCC
Confidence 7 4689999999999999999999999999999888889999999988888888 78999999999999873
No 92
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.5e-36 Score=323.09 Aligned_cols=223 Identities=17% Similarity=0.228 Sum_probs=190.5
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhh-hhh---hh--cc----cccc----cc----ccc
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEG-LLK---IQ--KG----ISRF----TD----EKS 642 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~-~~~---~~--~~----~~~~----~~----~~~ 642 (829)
+.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|+++ +.. .. .. ...+ .. ...
T Consensus 25 ~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (298)
T PRK12478 25 QLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDGRWDPGKDFAMVTARETGPTQK 104 (298)
T ss_pred ccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchhcccccccCchhhhhhhhhhhcchHHH
Confidence 3588899999999999999999999999999999999999999975 211 00 00 0000 00 011
Q ss_pred ccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccc-cccCCCcceeccccccCHHHHHHHHhcCCcc
Q psy11396 643 YCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRY-GFTPGAGSTLIFPQRFGKILSREILFTASEF 721 (829)
Q Consensus 643 ~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~-Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~ 721 (829)
+..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++ |+++ ++. +.+++|+.++++++++|++|
T Consensus 105 ~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~--~~~~vG~~~A~~llltg~~i 180 (298)
T PRK12478 105 FMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGM--WLYRLSLAKVKWHSLTGRPL 180 (298)
T ss_pred HHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhH--HHHHhhHHHHHHHHHcCCcc
Confidence 223445999999999999999999999999999999999999999997 8875 223 23679999999999999999
Q ss_pred CHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhh-CCHHHHHHHHHHHHHhhhcCChHHH---
Q psy11396 722 KGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQ-KKLSTIFLHELTMHDYTFVNNPSVI--- 797 (829)
Q Consensus 722 ~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~--- 797 (829)
+|+||+++||||+|||++++++++.+++++|+..+|.+++.+|++++.... ..+++.+..|...+...+ .+++.+
T Consensus 181 ~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~~e~~~~~~~~-~s~d~~e~~ 259 (298)
T PRK12478 181 TGVQAAEAELINEAVPFERLEARVAEVATELARIPLSQLQAQKLIVNQAYENMGLASTQTLGGILDGLMR-NTPDALEFI 259 (298)
T ss_pred CHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHh-cChhHHHHH
Confidence 999999999999999999999999999999999999999999999998776 458999999999988888 688886
Q ss_pred -----HHHHHHHhhcc
Q psy11396 798 -----TNIERYFDKSI 808 (829)
Q Consensus 798 -----e~~~~~~~k~~ 808 (829)
|++.+|++||.
T Consensus 260 ~~~~~egv~Af~ekR~ 275 (298)
T PRK12478 260 RTAETQGVRAAVERRD 275 (298)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 59999999984
No 93
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=100.00 E-value=4.2e-36 Score=328.00 Aligned_cols=224 Identities=17% Similarity=0.239 Sum_probs=197.8
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhccc-ccc--cc----cccccccccCCCC
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGI-SRF--TD----EKSYCMPLYCKIP 652 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~-~~~--~~----~~~~~~~~~~~kp 652 (829)
+.|+++.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....... ... .. ......+..+|||
T Consensus 23 ~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP 102 (342)
T PRK05617 23 ALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLAADRFFREEYRLNALIARYPKP 102 (342)
T ss_pred cccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchhHHHHHHHHHHHHHHHHhCCCC
Confidence 35888999999999999999999999999999998 9999999999865321110 000 00 1122334459999
Q ss_pred EEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCc
Q psy11396 653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGIS 732 (829)
Q Consensus 653 ~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv 732 (829)
|||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++| .++++++++|+.|+++||+++|||
T Consensus 103 vIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g-~~a~~llltG~~i~A~eA~~~GLv 181 (342)
T PRK05617 103 YIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPG-ALGTYLALTGARISAADALYAGLA 181 (342)
T ss_pred EEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhccc-HHHHHHHHcCCCCCHHHHHHcCCc
Confidence 9999999999999999999999999999999999999999999999999999877 789999999999999999999999
Q ss_pred ccccChhhHHHH--------------------------------------------------------------HHHHHH
Q psy11396 733 MPVLPRKQVLFY--------------------------------------------------------------SLKLAK 750 (829)
Q Consensus 733 ~~v~~~~~l~~~--------------------------------------------------------------~~~~a~ 750 (829)
++++|++++++. +.++++
T Consensus 182 ~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~a~~~a~ 261 (342)
T PRK05617 182 DHFVPSADLPALLDALISLRWDSGADVVDAALAAFATPAPASELAAQRAWIDECFAGDTVEDIIAALEADGGEFAAKTAD 261 (342)
T ss_pred ceecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHHhccHHHHHHHHH
Confidence 999999988876 889999
Q ss_pred HHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHH-hh
Q psy11396 751 KLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF-DK 806 (829)
Q Consensus 751 ~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~-~k 806 (829)
+|++.+|.+++.+|++++.....++++.++.|...+...+ .++++++++++|+ +|
T Consensus 262 ~i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~-~~~d~~egv~afl~ek 317 (342)
T PRK05617 262 TLRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAML-RSPDFVEGVRAVLIDK 317 (342)
T ss_pred HHHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-hCCchhhccceEEEcC
Confidence 9999999999999999998877889999999999999888 6889999999997 65
No 94
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=9.5e-36 Score=313.82 Aligned_cols=219 Identities=14% Similarity=0.172 Sum_probs=188.7
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc-c--cc--ccccccccccCCCCEEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS-R--FT--DEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~-~--~~--~~~~~~~~~~~~kp~Iaa 656 (829)
.|++|.+|+.+|.++++++++ ++|+||++|.|++||+|+|++++........ . .. ....+..+..+||||||+
T Consensus 25 ~Nal~~~~~~~L~~~l~~~~~--~vr~vVl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaa 102 (255)
T PRK07112 25 QNTINDRLIAECMDVLDRCEH--AATIVVLEGLPEVFCFGADFSAIAEKPDAGRADLIDAEPLYDLWHRLATGPYVTIAH 102 (255)
T ss_pred cCCCCHHHHHHHHHHHHHhhc--CceEEEEEcCCCCcccCcCHHHHhhccccchhhhhhHHHHHHHHHHHHcCCCCEEEE
Confidence 588999999999999999983 6999999999999999999998754221110 0 00 011233445599999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|+|||++|+++|||||++++++|++||+++|++|+++ ..+|++++|+.++++++++|++++++||++|||||+|+
T Consensus 103 v~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv 181 (255)
T PRK07112 103 VRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQKAHYMTLMTQPVTAQQAFSWGLVDAYG 181 (255)
T ss_pred EecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHHHHHHHHHhCCcccHHHHHHcCCCceec
Confidence 99999999999999999999999999999999999999765 46799999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396 737 PRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS 807 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~ 807 (829)
|.++. .+.+++++|+..+|.+++.+|++++.. ...+.+.++.|.......+ .++++++++++|++|+
T Consensus 182 ~~~~~--~~~~~a~~l~~~~p~a~~~~K~~~~~~-~~~~~~~~~~e~~~~~~~~-~~~~~~eg~~af~~kr 248 (255)
T PRK07112 182 ANSDT--LLRKHLLRLRCLNKAAVARYKSYASTL-DDTVAAARPAALAANIEMF-ADPENLRKIARYVETG 248 (255)
T ss_pred CcHHH--HHHHHHHHHHhCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHH-cChHHHHHHHHHHcCC
Confidence 86653 578899999999999999999999865 4567888888888888888 7999999999999986
No 95
>KOG0016|consensus
Probab=100.00 E-value=1.1e-34 Score=287.70 Aligned_cols=229 Identities=21% Similarity=0.298 Sum_probs=208.9
Q ss_pred cccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccccccc----------ccccccC
Q psy11396 580 ISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKS----------YCMPLYC 649 (829)
Q Consensus 580 l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 649 (829)
-..|+++.+++.++..++..+.+|+++..+|++|.|++||+|.|+..+............... ......+
T Consensus 27 kk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~~~d~~~~~~~~~~~v~~~~~~v~~fi~f 106 (266)
T KOG0016|consen 27 KKKNALNREDYVYIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKALDDDANEESDKASKFVKNVSCFVNTFINF 106 (266)
T ss_pred cccccccHHHHHHHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcCCCcccccchhhHHHHHHHHHHHHHHhcC
Confidence 346788889999999999999999999999999999999999999888765554433332222 1223349
Q ss_pred CCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHc
Q psy11396 650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKER 729 (829)
Q Consensus 650 ~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~ 729 (829)
|||+||.|||||+|.|+.+...||+|+++|+++|..|++++|..|++|+++++|++||...|.||++.|++++|+||++.
T Consensus 107 ~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~imG~~~A~E~ll~~~kltA~Ea~~~ 186 (266)
T KOG0016|consen 107 PKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIMGSASANEMLLFGEKLTAQEACEK 186 (266)
T ss_pred CCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhhchhhHHHHHHhCCcccHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhccc
Q psy11396 730 GISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSIK 809 (829)
Q Consensus 730 GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~ 809 (829)
|||+++++.+.+.+.++..+++++..+|.+++..|++++......+..+.++|+......| .++++.++|.+|+.+..|
T Consensus 187 glVskif~~~tf~~~v~~~ikq~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~~W-~s~e~~~~~~~~~~~~~k 265 (266)
T KOG0016|consen 187 GLVSKIFPAETFNEEVLKKIKQYSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLKQW-VSAECLARFKQYLSKKRK 265 (266)
T ss_pred CchhhhcChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhc-cChHHHHHHHHHhccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999 799999999999998754
No 96
>PRK08788 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=5.3e-35 Score=310.24 Aligned_cols=227 Identities=14% Similarity=0.156 Sum_probs=192.0
Q ss_pred cCCcccccccccccchhhhcc-----cccceeeeeeCC-CCeeeccCChhhhhhhhc--ccccc-cc----ccccccc--
Q psy11396 582 KDLKNSTVVKGITDAFSYINS-----SVQYKVIIITGY-ENYFACGGTKEGLLKIQK--GISRF-TD----EKSYCMP-- 646 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~-----d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~--~~~~~-~~----~~~~~~~-- 646 (829)
.|++|.+|+.+|.+++++++. |+++|+|||+|. |++||+|+|++++..... ..... .. ...+..+
T Consensus 37 ~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 116 (287)
T PRK08788 37 RPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFAELIRAGDRDALLAYARACVDGVHAFHR 116 (287)
T ss_pred CCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHhhhccccchHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999999998 899999999999 899999999988643111 00000 00 0011111
Q ss_pred -ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHH
Q psy11396 647 -LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE 725 (829)
Q Consensus 647 -~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~e 725 (829)
+.+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|+.++++++++|+.|+++|
T Consensus 117 ~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~~~l~~~vG~~~A~ellltG~~l~A~e 196 (287)
T PRK08788 117 GFGAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGPKLAEELILSGKLYTAEE 196 (287)
T ss_pred hcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHHHHHHHHhhHHHHHHHHHcCCCCCHHH
Confidence 1589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q psy11396 726 LKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFD 805 (829)
Q Consensus 726 A~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~ 805 (829)
|++|||||+++|++++.+++.+++++|+.. |.+...+|+.++......+++.++.+..++..++.....-.+-|++|.+
T Consensus 197 A~~~GLV~~vv~~~el~~~a~~~a~~ia~~-~~~~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (287)
T PRK08788 197 LHDMGLVDVLVEDGQGEAAVRTFIRKSKRK-LNGWRAMLRARRRVNPLSLEELMDITEIWVDAALQLEEKDLRTMERLVR 275 (287)
T ss_pred HHHCCCCcEecCchHHHHHHHHHHHHHhcC-ccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence 999999999999999999999999999986 6666777776666556678888888888888777677788899999987
Q ss_pred hccc
Q psy11396 806 KSIK 809 (829)
Q Consensus 806 k~~~ 809 (829)
...+
T Consensus 276 ~~~~ 279 (287)
T PRK08788 276 AQNR 279 (287)
T ss_pred HHhh
Confidence 6643
No 97
>PRK05869 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=2.3e-35 Score=303.70 Aligned_cols=190 Identities=16% Similarity=0.219 Sum_probs=170.1
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--ccc-ccccccccccCCCCEEEEec
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--RFT-DEKSYCMPLYCKIPVIAAMQ 658 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~~~-~~~~~~~~~~~~kp~Iaav~ 658 (829)
.|++|.+|+.+|.++++++++|+++|+||+||.|++||+|+|++++........ ... ....+..+..+||||||+||
T Consensus 28 ~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~ 107 (222)
T PRK05869 28 TNALTRQVYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLSAQEADTAARVRQQAVDAVAAIPKPTVAAIT 107 (222)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhccChhhHHHHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 488999999999999999999999999999999999999999998753211110 000 11223345569999999999
Q ss_pred ccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396 659 GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPR 738 (829)
Q Consensus 659 G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~ 738 (829)
|+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|..++++++++|++++++||+++||||+++|.
T Consensus 108 G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~ 187 (222)
T PRK05869 108 GYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGPSRAKELVFSGRFFDAEEALALGLIDEMVAP 187 (222)
T ss_pred CEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCCCEeeCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhh
Q psy11396 739 KQVLFYSLKLAKKLSLLSKKELELQKKYYSHSL 771 (829)
Q Consensus 739 ~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~ 771 (829)
+++++++.+++++|+..+|.+++.+|++++..+
T Consensus 188 ~~l~~~a~~~a~~ia~~~~~a~~~~K~~~~~~~ 220 (222)
T PRK05869 188 DDVYDAAAAWARRFLDGPPHALAAAKAGISDVY 220 (222)
T ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998764
No 98
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=2.9e-35 Score=324.98 Aligned_cols=226 Identities=17% Similarity=0.239 Sum_probs=194.4
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc-ccc----cccccccccCCCCEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR-FTD----EKSYCMPLYCKIPVIA 655 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~-~~~----~~~~~~~~~~~kp~Ia 655 (829)
..|++|.+|+.+|..+++.++.|+++|+|||+|.|++||+|+|++++......... ... ......+..+|||+||
T Consensus 31 ~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIA 110 (379)
T PLN02874 31 QLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRESDDSCLEVVYRMYWLCYHIHTYKKTQVA 110 (379)
T ss_pred cccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhcccchHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 35888999999999999999999999999999999999999999987432111100 000 0112234459999999
Q ss_pred EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV 735 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v 735 (829)
+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|. +++++++||++|+++||+++|||+++
T Consensus 111 aV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~-~a~~l~ltG~~i~a~eA~~~GLv~~v 189 (379)
T PLN02874 111 LVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGH-LGEYLALTGARLNGKEMVACGLATHF 189 (379)
T ss_pred EecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHH-HHHHHHHcCCcccHHHHHHcCCccEE
Confidence 99999999999999999999999999999999999999999999999999885 89999999999999999999999999
Q ss_pred cChhhHHH---H----------------------------------------------------------------HHHH
Q psy11396 736 LPRKQVLF---Y----------------------------------------------------------------SLKL 748 (829)
Q Consensus 736 ~~~~~l~~---~----------------------------------------------------------------~~~~ 748 (829)
||++++.+ + +.++
T Consensus 190 v~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~eii~al~~~~~~~~~~~A~~~ 269 (379)
T PLN02874 190 VPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVEEIIKAFESEASKTGNEWIKET 269 (379)
T ss_pred eCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHhhcccccccHHHHHH
Confidence 99888865 2 2378
Q ss_pred HHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhc--CChHHHHHHHHHH-hhc
Q psy11396 749 AKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFV--NNPSVITNIERYF-DKS 807 (829)
Q Consensus 749 a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~~~~~e~~~~~~-~k~ 807 (829)
+++|++.+|.+++.+|++++.....++++.++.|.......+. .+++++|++++|+ +|+
T Consensus 270 a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~AflidK~ 331 (379)
T PLN02874 270 LKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIRALVIDKD 331 (379)
T ss_pred HHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccceEEEcCC
Confidence 9999999999999999999988777899999999888777763 2789999999997 773
No 99
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=1.4e-34 Score=329.01 Aligned_cols=225 Identities=9% Similarity=0.064 Sum_probs=199.0
Q ss_pred cCCcccccccccccchhhhc-ccccceeeeeeCCCCe-eeccCChhhhhhhhcc-c-cc-cc-ccccccccccCCCCEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYIN-SSVQYKVIIITGYENY-FACGGTKEGLLKIQKG-I-SR-FT-DEKSYCMPLYCKIPVIA 655 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~-~d~~vr~vVl~g~g~~-F~~G~D~~~~~~~~~~-~-~~-~~-~~~~~~~~~~~~kp~Ia 655 (829)
.|+++.+|+.+|.+++.+++ +|+++|+|||||.|+. ||+|+|+..+. ..+. . .. .. ....+..+..+|||+||
T Consensus 292 ~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G~~~F~aG~Dl~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~kpviA 370 (546)
T TIGR03222 292 ANWWPLKLARELDDAILHLRTNELDIGLWVFRTQGDAELVLAADALLEA-HKDHWFVRETIGYLRRTLARLDVSSRSLFA 370 (546)
T ss_pred cCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCCCCceecCcCccccc-cccchhHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 48899999999999999998 4599999999999987 99999997421 1110 0 01 00 01123344559999999
Q ss_pred Ee-cccccchh-hhhhhccccccc-------cccceeccccccccccCCCcceecccccc-CHHHH--HHHHhcCCccCH
Q psy11396 656 AM-QGHAIGAG-WAMGLFCDYTIF-------SEESVYQSPYMRYGFTPGAGSTLIFPQRF-GKILS--REILFTASEFKG 723 (829)
Q Consensus 656 av-~G~a~GgG-~~lal~cD~~ia-------~~~a~f~~~e~~~Gl~p~~g~~~~l~r~i-G~~~a--~e~ll~g~~~~a 723 (829)
+| ||+|+||| ++|+++||+||+ +++++|++||+++|++|++|++++|++++ |.+++ ++++++|++|+|
T Consensus 371 av~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lGl~p~~gg~~~L~~~v~G~~~a~~~~~~ltg~~i~A 450 (546)
T TIGR03222 371 LIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFGLYPMVNGLSRLATRFYAEPAPVAAVRDKIGQALDA 450 (546)
T ss_pred EECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccccCCCcCcHHHHHHHhcCchhHHHHHHHHhCCCCCH
Confidence 99 89999999 999999999999 89999999999999999999999999998 99999 569999999999
Q ss_pred HHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHH-HHHHHHHHHhhhcCChHHHH---H
Q psy11396 724 KELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTI-FLHELTMHDYTFVNNPSVIT---N 799 (829)
Q Consensus 724 ~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~e---~ 799 (829)
+||++||||++++|++++.+++.+++++|+..+|.+++.+|+.++.....+++.. +..|..++...+ .+++.+| +
T Consensus 451 ~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~-~~~d~~e~~~g 529 (546)
T TIGR03222 451 EEAERLGLVTAAPDDIDWEDEIRIALEERASFSPDALTGLEANLRFAGPETMETRIFGRLTAWQNWIF-NRPNAVGENGA 529 (546)
T ss_pred HHHHHcCCcccccCchHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcChhhhHHHHHHHHHHHHh-cCCcccchhhH
Confidence 9999999999999999999999999999999999999999999999888889999 999999999999 6889999 9
Q ss_pred HHHHHhhcc
Q psy11396 800 IERYFDKSI 808 (829)
Q Consensus 800 ~~~~~~k~~ 808 (829)
+++|+|||+
T Consensus 530 ~~af~ekr~ 538 (546)
T TIGR03222 530 LKVYGSGKK 538 (546)
T ss_pred HHHHccCCC
Confidence 999999984
No 100
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=2.2e-34 Score=328.92 Aligned_cols=247 Identities=9% Similarity=0.050 Sum_probs=206.9
Q ss_pred EEeccccchhhHHHH--HHHHhhhcccCCcccccccccccchhhhcc-cccceeeeeeCCC-CeeeccCChhhhhhhhcc
Q psy11396 558 VFPLSAKNLSQLLIY--AKLICNYISKDLKNSTVVKGITDAFSYINS-SVQYKVIIITGYE-NYFACGGTKEGLLKIQKG 633 (829)
Q Consensus 558 ll~~Sa~~~~~L~~~--~~~~~~~l~~n~~~~~~~~eL~~~l~~~~~-d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~ 633 (829)
+.++.-++|+.++.. .+. -+-.-|+++.+|+.+|.++++.++. |+++|+|||||.| +.||+|+|++... ....
T Consensus 272 va~itlnrP~~~Na~~~~~~--~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG~Dl~~~~-~~~~ 348 (550)
T PRK08184 272 TATITVKAPTAAQPADIAGI--VAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLAADATLLA-HKDH 348 (550)
T ss_pred EEEEEEeCcccccccccccc--cccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeCCChhhhc-ccch
Confidence 344555566554321 111 1234588999999999999999986 7999999999999 4999999976321 1110
Q ss_pred -c-cc-cc-ccccccccccCCCCEEEEec-ccccchh-hhhhhcccccccc-------ccceeccccccccccCCCccee
Q psy11396 634 -I-SR-FT-DEKSYCMPLYCKIPVIAAMQ-GHAIGAG-WAMGLFCDYTIFS-------EESVYQSPYMRYGFTPGAGSTL 700 (829)
Q Consensus 634 -~-~~-~~-~~~~~~~~~~~~kp~Iaav~-G~a~GgG-~~lal~cD~~ia~-------~~a~f~~~e~~~Gl~p~~g~~~ 700 (829)
. .. .. ....+..+..+||||||+|| |+|+||| ++|+++||+||++ ++++|++||+++|++|++|+++
T Consensus 349 ~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~~~Gl~p~~gg~~ 428 (550)
T PRK08184 349 WLVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLSALNFGLYPMVNGLS 428 (550)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccccccCCCCCCcHH
Confidence 0 00 00 01122334459999999997 9999999 9999999999999 9999999999999999999999
Q ss_pred ccccc-cCHHHHHHH--HhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHH
Q psy11396 701 IFPQR-FGKILSREI--LFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLST 777 (829)
Q Consensus 701 ~l~r~-iG~~~a~e~--ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~ 777 (829)
+|+++ +|..+++++ +++|++|+++||++|||||+++|++++++++.+++++|+..+|.+++.+|++++.....+++.
T Consensus 429 ~L~r~~vG~~~A~~~~l~~tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~ 508 (550)
T PRK08184 429 RLARRFYGEPDPLAAVRAKIGQPLDADAAEELGLVTAAPDDIDWEDEVRIALEERASLSPDALTGMEANLRFAGPETMET 508 (550)
T ss_pred HhHHHhcChHHHHHHHHHHhCCcCCHHHHHHcCCcccccChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCHHH
Confidence 99998 699999997 589999999999999999999999999999999999999999999999999999998889999
Q ss_pred H-HHHHHHHHHhhhcCChHHHH---HHHHHHhhcc
Q psy11396 778 I-FLHELTMHDYTFVNNPSVIT---NIERYFDKSI 808 (829)
Q Consensus 778 ~-~~~e~~~~~~~~~~~~~~~e---~~~~~~~k~~ 808 (829)
. +..|..++..++ .+++.+| ++++|+|||+
T Consensus 509 ~~~~~e~~~~~~~~-~~~d~~e~~~g~~af~ekr~ 542 (550)
T PRK08184 509 RIFGRLTAWQNWIF-QRPNAVGEKGALKVYGTGQK 542 (550)
T ss_pred HHHHHHHHHHHHHh-cCCcccccchHHHHhccCCC
Confidence 9 999999999999 6889999 9999999985
No 101
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.2e-34 Score=304.44 Aligned_cols=212 Identities=21% Similarity=0.355 Sum_probs=181.7
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcc-----------------c--c-ccc---
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKG-----------------I--S-RFT--- 638 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~-----------------~--~-~~~--- 638 (829)
.|+++.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... . . ...
T Consensus 25 ~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (288)
T PRK08290 25 RNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDPGPDQHPTLWWDGATKPGVEQRYAREW 104 (288)
T ss_pred cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCCccccccccccccccccccccccccccccchhhHHHHHH
Confidence 5888999999999999999999999999999999999999999876321110 0 0 000
Q ss_pred --ccccccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHh
Q psy11396 639 --DEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILF 716 (829)
Q Consensus 639 --~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll 716 (829)
....+..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|+ |+ .+.+++++++|+.+++++++
T Consensus 105 ~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~~-~~~~~l~~~iG~~~A~~lll 182 (288)
T PRK08290 105 EVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-PG-VEYFAHPWELGPRKAKELLF 182 (288)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-Cc-chHHHHHHHhhHHHHHHHHH
Confidence 001112344599999999999999999999999999999999999999999999 43 34567889999999999999
Q ss_pred cCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhC-CHHHHHHHHHHHHHhhhcCChH
Q psy11396 717 TASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQK-KLSTIFLHELTMHDYTFVNNPS 795 (829)
Q Consensus 717 ~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~-~~~~~~~~e~~~~~~~~~~~~~ 795 (829)
||+.|+++||+++||||+++|.+++++++.+++++|+..++.+++.+|++++..+.. .++..+..|.......+.++++
T Consensus 183 tG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (288)
T PRK08290 183 TGDRLTADEAHRLGMVNRVVPRDELEAETLELARRIAAMPPFGLRLTKRAVNQTLDAQGFRAALDAVFDLHQLGHAHNAE 262 (288)
T ss_pred cCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHccccchh
Confidence 999999999999999999999999999999999999999999999999999988765 5888888888888877756665
No 102
>KOG1679|consensus
Probab=100.00 E-value=8.7e-35 Score=277.20 Aligned_cols=229 Identities=19% Similarity=0.290 Sum_probs=201.2
Q ss_pred hcccCCcccccccccccchhhhcccccceeeeeeCC-CCeeeccCChhhhhhhhcc-ccccc--ccccccccccCCCCEE
Q psy11396 579 YISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACGGTKEGLLKIQKG-ISRFT--DEKSYCMPLYCKIPVI 654 (829)
Q Consensus 579 ~l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~-~~~~~--~~~~~~~~~~~~kp~I 654 (829)
.-.+|.++.-|+++|.++++.+.+|+.+|+|++.+. +..||+|.|+++-...+.. ...|. .+..+..+-.+|.|||
T Consensus 49 pa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~Ms~~Ev~~fV~~lR~~~~dIe~Lp~P~I 128 (291)
T KOG1679|consen 49 PAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTMSPSEVTRFVNGLRGLFNDIERLPQPVI 128 (291)
T ss_pred hhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcCCHHHHHHHHHHHHHHHHHHHhCCccce
Confidence 345778888899999999999999999999999987 7899999999885432221 11111 1223344445999999
Q ss_pred EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396 655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP 734 (829)
Q Consensus 655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~ 734 (829)
|+|.|.|.|||++|+++||+|+++++++|+++|++++++|+.|++++|+|.+|.+.++|++||++.+++.||...||||+
T Consensus 129 AAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg~alaKELIftarvl~g~eA~~lGlVnh 208 (291)
T KOG1679|consen 129 AAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVGVALAKELIFTARVLNGAEAAKLGLVNH 208 (291)
T ss_pred ehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHhHHHHHhHhhhheeccchhHHhcchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChh----hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 735 VLPRK----QVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 735 v~~~~----~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
+|... ...+++.+++++|...-|.++++.|..++.....++...+..|..-+.... ...+..|++.+|.+||.
T Consensus 209 vv~qneegdaa~~kal~lA~eilp~gPiavr~aKlAIn~G~evdiasgl~iEe~CYaq~i-~t~drLeglaaf~ekr~ 285 (291)
T KOG1679|consen 209 VVEQNEEGDAAYQKALELAREILPQGPIAVRLAKLAINLGMEVDIASGLSIEEMCYAQII-PTKDRLEGLAAFKEKRK 285 (291)
T ss_pred HHhcCccccHHHHHHHHHHHHhccCCchhhhHHHHHhccCceecccccccHHHHHHHhcC-cHHHHHHHHHHHHhhcC
Confidence 99754 677889999999999999999999999999999888889888887777777 67899999999999884
No 103
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9.3e-34 Score=305.97 Aligned_cols=190 Identities=16% Similarity=0.250 Sum_probs=164.1
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc---c-c--------------cc----
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI---S-R--------------FT---- 638 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~---~-~--------------~~---- 638 (829)
+.|++|.+|+.+|.+++++++.|+++|+|||+|.|++||+|.|++++....... . . ..
T Consensus 30 ~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (302)
T PRK08272 30 KGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSGGGGGAYPGKRQAVNHLPDDPWDPMID 109 (302)
T ss_pred ccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhcccccccccccccccccccccccccccchhh
Confidence 458899999999999999999999999999999999999999999875422110 0 0 00
Q ss_pred ------ccccccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHH
Q psy11396 639 ------DEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSR 712 (829)
Q Consensus 639 ------~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~ 712 (829)
....+..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|.+|+. .++++++|+.+|+
T Consensus 110 ~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~gg~~~~---~~~~~~vG~~~A~ 186 (302)
T PRK08272 110 YQMMSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRVWGVPAT---GMWAYRLGPQRAK 186 (302)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhcccCChH---HHHHHHhhHHHHH
Confidence 0011223445999999999999999999999999999999999999999998555543 2578899999999
Q ss_pred HHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhC
Q psy11396 713 EILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQK 773 (829)
Q Consensus 713 e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~ 773 (829)
++++||++|+++||+++||||+++|++++++++.+++++|+..||.+++.+|+.++..+..
T Consensus 187 ~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~la~~ia~~~~~a~~~~K~~l~~~~~~ 247 (302)
T PRK08272 187 RLLFTGDCITGAQAAEWGLAVEAVPPEELDERTERLVERIAAVPVNQLAMVKLAVNSALLQ 247 (302)
T ss_pred HHHHcCCccCHHHHHHcCCCceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987754
No 104
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=7.4e-34 Score=312.65 Aligned_cols=220 Identities=15% Similarity=0.222 Sum_probs=188.2
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc--c----cccc-cccccccccCCCCE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI--S----RFTD-EKSYCMPLYCKIPV 653 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~--~----~~~~-~~~~~~~~~~~kp~ 653 (829)
+.|++|.+|+.+|.++++.+++|+++|+|||+|.|++||+|+|+.++....... . .+.. ......+..+|||+
T Consensus 57 ~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~~~~~~~l~~~i~~~pkPv 136 (401)
T PLN02157 57 ALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDAIREFFSSLYSFIYLLGTYLKPH 136 (401)
T ss_pred ccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 357789999999999999999999999999999999999999999875322110 0 0000 01122244599999
Q ss_pred EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396 654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM 733 (829)
Q Consensus 654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~ 733 (829)
||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|. .++++++||++++++||+++|||+
T Consensus 137 IA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G~-~a~~L~LTG~~i~A~eA~~~GLv~ 215 (401)
T PLN02157 137 VAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGR-LGEYLGLTGLKLSGAEMLACGLAT 215 (401)
T ss_pred EEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhhH-HHHHHHHcCCcCCHHHHHHcCCce
Confidence 9999999999999999999999999999999999999999999999999999995 899999999999999999999999
Q ss_pred cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHH
Q psy11396 734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYF 804 (829)
Q Consensus 734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~ 804 (829)
++||.+++ +++.+++.+++..+|.++..+|+.++.. .......+..+...+..++ .++++.|++++|.
T Consensus 216 ~vVp~~~l-~~~~~~~~~i~~~~p~av~~~k~~~~~~-~~~~~~~l~~~~~~i~~~f-~~~d~~ei~~al~ 283 (401)
T PLN02157 216 HYIRSEEI-PVMEEQLKKLLTDDPSVVESCLEKCAEV-AHPEKTGVIRRIDLLEKCF-SHDTVEEIIDSLE 283 (401)
T ss_pred EEeCHhHH-HHHHHHHHHHHcCCHHHHHHHHHHHhcc-cCCcchhHHHHHHHHHHHh-cCCCHHHHHHHHH
Confidence 99999998 6778999999999999999999999765 2334456666777788888 6889999999994
No 105
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.3e-33 Score=298.74 Aligned_cols=223 Identities=21% Similarity=0.239 Sum_probs=179.9
Q ss_pred ceEEEEeeecccCCcccccccCCCCceeEEeccccchhhHHHHHHHHhhhcccCCcccccccccccchhhhcccccceee
Q psy11396 530 TNAHIVLMEKIKNNENIDKFINNLPIFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVI 609 (829)
Q Consensus 530 ~na~~vl~e~~~~~~~~~~~~~~~~~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL~~~l~~~~~d~~vr~v 609 (829)
...+++.|.-|...+. -+..+..|+..+.-++++. .|++|.+|+.+|.++++.++.|+++++|
T Consensus 14 ~~~~~~~~~~~~~~~~----~~~~~~~~~A~ItLNRP~k-------------~NAls~~ml~eL~~al~~~~~D~dVrvV 76 (360)
T TIGR03200 14 VCPGVLYEKRPAKRPD----GNVVPGLYNAWIILDNPKQ-------------YNSYTTDMVKAIILAFRRASSDRDVVAV 76 (360)
T ss_pred cCCceeeecCCCCCCC----CCccCceEEEEEEECCCCc-------------cCCCCHHHHHHHHHHHHHHhhCCCceEE
Confidence 3445666665533221 1223567877777777664 5678999999999999999999999999
Q ss_pred eeeCCC-CeeeccCChhhhhhhhcccc----ccc--ccccccccccCCCCEEEEecccccchhhhhhhccccccccccce
Q psy11396 610 IITGYE-NYFACGGTKEGLLKIQKGIS----RFT--DEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESV 682 (829)
Q Consensus 610 Vl~g~g-~~F~~G~D~~~~~~~~~~~~----~~~--~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~ 682 (829)
||||.| ++||+|+|++++........ ... ....+..+..+||||||+|||+|+|||++|+++||+||++++++
T Consensus 77 VLTG~G~kaFCAG~DLke~~~~~~~~~~~~~~~~~~~~~l~~~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~ 156 (360)
T TIGR03200 77 VFTAVGDKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMVSAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLAN 156 (360)
T ss_pred EEEcCCCCcccCCcCHHHHhhhcccChhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCE
Confidence 999999 69999999998754221100 000 01122334559999999999999999999999999999999999
Q ss_pred eccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhH------------HHHHHHHHH
Q psy11396 683 YQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQV------------LFYSLKLAK 750 (829)
Q Consensus 683 f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l------------~~~~~~~a~ 750 (829)
|++||+++|++|++|++++|++++|..++++++++|++|+|+||+++|||++|+|+.++ ++.+.++++
T Consensus 157 Fg~PE~rlGl~P~~Ggt~rLprlvG~~rA~~llltGe~~sA~EA~~~GLVd~VVp~~~~~~~~~~~~~~~~d~~~~~~~~ 236 (360)
T TIGR03200 157 FGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPWSAHKAKRLGIIMDVVPALKVDGKFVANPLVVTDRYLDEFGR 236 (360)
T ss_pred EeCchhccCCCCCccHHHHHHHhhCHHHHHHHHHhCCcCcHHHHHHcCChheecCchhcCcchhcCcccchHHHHHHHhH
Confidence 99999999999999999999999999999999999999999999999999999998887 777777777
Q ss_pred HHhcCCHH--HHHHHHHHHHh
Q psy11396 751 KLSLLSKK--ELELQKKYYSH 769 (829)
Q Consensus 751 ~i~~~~~~--a~~~~K~~l~~ 769 (829)
.+...++. +++..|.+++.
T Consensus 237 ~~~~~~~~~~~~~~~k~~~~~ 257 (360)
T TIGR03200 237 IVHGEFKAGDELKAGKELIKQ 257 (360)
T ss_pred HhcCCCcchhHHHHHHHHHhc
Confidence 77777666 67777777765
No 106
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.5e-34 Score=295.38 Aligned_cols=202 Identities=18% Similarity=0.145 Sum_probs=174.1
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccccc--ccccccccccCCCCEEEEec
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFT--DEKSYCMPLYCKIPVIAAMQ 658 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~kp~Iaav~ 658 (829)
..|+++.+|+.+|.++++.++ +++++||++|.|++||+|.|++++.........+. ....+..+..+||||||+||
T Consensus 22 ~~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAav~ 99 (229)
T PRK06213 22 KVNALSPAMIDALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVMTSGAQAAIALLTAGSTLARRLLSHPKPVIVACT 99 (229)
T ss_pred CCCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHHhcchHhHHHHHHHHHHHHHHHHcCCCCEEEEEc
Confidence 358899999999999999988 45799999999999999999988753211111110 11223344569999999999
Q ss_pred ccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396 659 GHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVLP 737 (829)
Q Consensus 659 G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~ 737 (829)
|+|+|||++|+++|||||++++ ++|++||+++|++|+.++..++++++|...+++++++|++++++||+++||||+|+|
T Consensus 100 G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~~a~~lll~g~~~~a~eA~~~Glv~~vv~ 179 (229)
T PRK06213 100 GHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPSAFQRAVINAEMFDPEEAVAAGFLDEVVP 179 (229)
T ss_pred CeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHHHHHHHHHcCcccCHHHHHHCCCceeccC
Confidence 9999999999999999999999 999999999999888888888899999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHH
Q psy11396 738 RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELT 784 (829)
Q Consensus 738 ~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~ 784 (829)
++++.+++.++++++++.++.+++.+|++++......+++.++.|..
T Consensus 180 ~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~ 226 (229)
T PRK06213 180 PEQLLARAQAAARELAGLNMGAHAATKLKVRAAALEAIRAAIEGDAA 226 (229)
T ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhchhhhhh
Confidence 99999999999999999999999999999998776666766666654
No 107
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=3.6e-33 Score=332.49 Aligned_cols=229 Identities=15% Similarity=0.192 Sum_probs=197.7
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccc----cccc--ccccccccccCCCCEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGI----SRFT--DEKSYCMPLYCKIPVIA 655 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~----~~~~--~~~~~~~~~~~~kp~Ia 655 (829)
.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|+|++++....... ..+. ....+..+..+||||||
T Consensus 28 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIA 107 (715)
T PRK11730 28 VNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLFAAPEEELSQWLHFANSIFNRLEDLPVPTVA 107 (715)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhccCCHHHHHHHHHHHHHHHHHHHcCCCCEEE
Confidence 57889999999999999999999999999999999999999998875321100 0010 01122334559999999
Q ss_pred EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV 735 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v 735 (829)
+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|..+|++++++|++++|+||+++||||+|
T Consensus 108 av~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~~A~~llltG~~~~A~eA~~~GLv~~v 187 (715)
T PRK11730 108 AINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALEWIAAGKDVRAEDALKVGAVDAV 187 (715)
T ss_pred EECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHCCCCeEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHHHHHhcC------------CHH---------HHHHHHH------------------HHHhhhhCCHH
Q psy11396 736 LPRKQVLFYSLKLAKKLSLL------------SKK---------ELELQKK------------------YYSHSLQKKLS 776 (829)
Q Consensus 736 ~~~~~l~~~~~~~a~~i~~~------------~~~---------a~~~~K~------------------~l~~~~~~~~~ 776 (829)
+|++++++++.+++++|+.. +|. +++.+|+ +++.....+++
T Consensus 188 v~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~p~a~~~~~~~~~~~~~k~~~~~~~~~~~pa~~~~~~~i~~~~~~~~~ 267 (715)
T PRK11730 188 VAPEKLQEAALALLKQAIAGKLDWKARRQPKLEPLKLSKIEAMMSFTTAKGMVAQKAGKHYPAPMTAVKTIEAAAGLGRD 267 (715)
T ss_pred cCHHHHHHHHHHHHHHHhhcCCccccccCcccccccccchhHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHhcCCHH
Confidence 99999999999999999865 344 3466664 56777777899
Q ss_pred HHHHHHHHHHHhhhcCChHHHHHHHHHHhhccccC
Q psy11396 777 TIFLHELTMHDYTFVNNPSVITNIERYFDKSIKKN 811 (829)
Q Consensus 777 ~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~~~ 811 (829)
+.++.|...+..++ .+++.++++.+|++++..|+
T Consensus 268 ~~l~~E~~~~~~~~-~s~d~~egi~aF~~~~~~~~ 301 (715)
T PRK11730 268 EALELEAKGFVKLA-KTNVARALVGIFLNDQYVKG 301 (715)
T ss_pred HHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999 79999999999998866433
No 108
>KOG1681|consensus
Probab=99.97 E-value=2.3e-33 Score=270.19 Aligned_cols=240 Identities=20% Similarity=0.302 Sum_probs=207.9
Q ss_pred ceeEEeccccchhhHHHHHHHHhhhcccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc--
Q psy11396 555 IFMVFPLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-- 632 (829)
Q Consensus 555 ~~~ll~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-- 632 (829)
.|+++-++-++|+-+ |++|..||.|+-++|+.+.+||++|+|||+|+|+.||+|.|+..+.....
T Consensus 29 ~~~V~hv~lnRPsk~-------------Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~~ 95 (292)
T KOG1681|consen 29 QPFVYHVQLNRPSKL-------------NALNKVFWREFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDMASDRILQ 95 (292)
T ss_pred CCeEEEEEecCcchh-------------hhhhHHHHHHHHHHHHhhccCCCceEEEEecCCcceecccCcchhhhhhccc
Confidence 366777777777665 45688899999999999999999999999999999999999776543211
Q ss_pred --ccccccc-----------cccccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcce
Q psy11396 633 --GISRFTD-----------EKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST 699 (829)
Q Consensus 633 --~~~~~~~-----------~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~ 699 (829)
....-.. ...+..+-.||||+|++|||+|+|+|+.|.-+||+|+++++|.|+.-|+.+|+..+.|..
T Consensus 96 ~~~dd~aR~g~~lrr~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL 175 (292)
T KOG1681|consen 96 PEGDDVARKGRSLRRIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTL 175 (292)
T ss_pred cccchHhhhhHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhH
Confidence 0000000 011222333999999999999999999999999999999999999999999999999999
Q ss_pred eccccccC-HHHHHHHHhcCCccCHHHHHHcCCcccccC-hhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHH
Q psy11396 700 LIFPQRFG-KILSREILFTASEFKGKELKERGISMPVLP-RKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLST 777 (829)
Q Consensus 700 ~~l~r~iG-~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~-~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~ 777 (829)
.+||..+| .+.++|+.+|++.|+|.||++.|||.+|+| .+++++.+..+|..|+..+|.+++.+|+.++.....+.++
T Consensus 176 ~RlpkvVGn~s~~~elafTar~f~a~EAl~~GLvSrvf~dk~~ll~~~l~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~ 255 (292)
T KOG1681|consen 176 NRLPKVVGNQSLARELAFTARKFSADEALDSGLVSRVFPDKEELLNGALPMAELIASKSPVAVQGTKENLLYSREHSVEE 255 (292)
T ss_pred hhhhHHhcchHHHHHHHhhhhhcchhhhhhcCcchhhcCCHHHHHhhhHHHHHHhccCCceeeechHHHHHHHhhhhhhh
Confidence 99999999 999999999999999999999999999998 5889999999999999999999999999999999889999
Q ss_pred HHHHHHHHHHhhhcCChHHHHHHHHHHhhcc
Q psy11396 778 IFLHELTMHDYTFVNNPSVITNIERYFDKSI 808 (829)
Q Consensus 778 ~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~ 808 (829)
.+..-..+...++ -+++..+.+.+-++|++
T Consensus 256 sLnyvatwNms~L-~s~Dl~~av~a~m~k~k 285 (292)
T KOG1681|consen 256 SLNYVATWNMSML-LSDDLVKAVMAQMEKLK 285 (292)
T ss_pred hHHHHHHHHHHHH-HHHHHHHHHHHHhhcCC
Confidence 9999999999988 57799999988888653
No 109
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=99.97 E-value=4.3e-32 Score=323.37 Aligned_cols=230 Identities=19% Similarity=0.314 Sum_probs=198.4
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCC-CCeeeccCChhhhhhhhccc--cccc--ccccccccccCCCCEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACGGTKEGLLKIQKGI--SRFT--DEKSYCMPLYCKIPVIA 655 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~~--~~~~--~~~~~~~~~~~~kp~Ia 655 (829)
..|++|.+|+.+|.++++.++.|+++|+|||+|. |++||+|+|++++....... ..+. ....+..+..+||||||
T Consensus 27 ~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIA 106 (708)
T PRK11154 27 KMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAACKTAQEAEALARQGQQLFAEIEALPIPVVA 106 (708)
T ss_pred CCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhccCCHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 4588999999999999999999999999999987 58999999998874321110 0110 01123345569999999
Q ss_pred Eecccccchhhhhhhcccccccccc--ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEE--SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM 733 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~--a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~ 733 (829)
+|||+|+|||++|+++|||||++++ ++|++||+++|++|++|++++|++++|..+|++|+++|++++++||+++||||
T Consensus 107 aV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~~~A~~llltG~~i~a~eA~~~GLv~ 186 (708)
T PRK11154 107 AIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGLVD 186 (708)
T ss_pred EECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCHHHHHHHHHhCCcCCHHHHHHCCCCc
Confidence 9999999999999999999999997 48999999999999999999999999999999999999999999999999999
Q ss_pred cccChhhHHHHHHHHHHH-------------HhcCCHH----------------------HHHHHHHHHHhhhhCCHHHH
Q psy11396 734 PVLPRKQVLFYSLKLAKK-------------LSLLSKK----------------------ELELQKKYYSHSLQKKLSTI 778 (829)
Q Consensus 734 ~v~~~~~l~~~~~~~a~~-------------i~~~~~~----------------------a~~~~K~~l~~~~~~~~~~~ 778 (829)
+++|++++.+++.+++++ ++..+|. ++..+|++++.....+++++
T Consensus 187 ~vv~~~~l~~~a~~~A~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~~A~~~~k~~i~~~~~~~~~~~ 266 (708)
T PRK11154 187 DVVPHSILLEVAVELAKKGKPARRPLPVRERLLEGNPLGRALLFKQARKKTLAKTQGNYPAPERILDVVRTGLEKGMSSG 266 (708)
T ss_pred EecChHHHHHHHHHHHHhcCCccCcCCchhhhcccCchhHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcCCHHHH
Confidence 999999999999999988 4555553 68899999999888889999
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHhh-ccccC
Q psy11396 779 FLHELTMHDYTFVNNPSVITNIERYFDK-SIKKN 811 (829)
Q Consensus 779 ~~~e~~~~~~~~~~~~~~~e~~~~~~~k-~~~~~ 811 (829)
+..|...+..++ .+++.++++.+|+.+ +.|+.
T Consensus 267 l~~E~~~~~~~~-~s~~~~~~~~aF~~~~~~~~~ 299 (708)
T PRK11154 267 YEAEARAFGELA-MTPESAALRSIFFATTEMKKD 299 (708)
T ss_pred HHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhcCC
Confidence 999999999999 799999999999955 44443
No 110
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=99.97 E-value=9.2e-32 Score=319.68 Aligned_cols=230 Identities=18% Similarity=0.292 Sum_probs=196.5
Q ss_pred ccCCcccccccccccchhhhcccccceeeee-eCCCCeeeccCChhhhhhhhcc--ccc-c-cccccccccccCCCCEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIII-TGYENYFACGGTKEGLLKIQKG--ISR-F-TDEKSYCMPLYCKIPVIA 655 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl-~g~g~~F~~G~D~~~~~~~~~~--~~~-~-~~~~~~~~~~~~~kp~Ia 655 (829)
..|++|.+|+.+|.++++.++.|+++|+||| +|.|++||+|+|++++...... ... . .....+..+..+||||||
T Consensus 22 ~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIA 101 (699)
T TIGR02440 22 KMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAACQTAGEAKALAQQGQVLFAELEALPIPVVA 101 (699)
T ss_pred CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhccCChhHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 4688999999999999999999999999986 6789999999999987431110 000 0 011123345569999999
Q ss_pred Eecccccchhhhhhhcccccccccc--ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEE--SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM 733 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~--a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~ 733 (829)
+|||+|+|||++|+++|||||++++ ++|++||+++|++|++|++++|++++|..++++++++|+.|+++||+++||||
T Consensus 102 aVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~~~a~eA~~~GLV~ 181 (699)
T TIGR02440 102 AIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGLVD 181 (699)
T ss_pred EECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHhCCCCc
Confidence 9999999999999999999999986 79999999999999999999999999999999999999999999999999999
Q ss_pred cccChhhHHHHHHHHHH-------------HHhcCCHHH----------------------HHHHHHHHHhhhhCCHHHH
Q psy11396 734 PVLPRKQVLFYSLKLAK-------------KLSLLSKKE----------------------LELQKKYYSHSLQKKLSTI 778 (829)
Q Consensus 734 ~v~~~~~l~~~~~~~a~-------------~i~~~~~~a----------------------~~~~K~~l~~~~~~~~~~~ 778 (829)
+++|++++++++.++++ +++..+|.+ ...+|+.++.....+++++
T Consensus 182 ~vv~~~~l~~~a~~~A~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~k~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~ 261 (699)
T TIGR02440 182 DVVPQSILLDTAVEMALKGKPIRKPLSLQERLLEGTPLGRALLFDQAAKKTAKKTQGNYPAAERILDVVRQGLAQGMQKG 261 (699)
T ss_pred EecChhHHHHHHHHHHHhCCCCCCCccchhhhcccCchhHHHHHHHHHHHHHHhcccCChhHHHHHHHHHHHhcCCHHHH
Confidence 99999999999999998 566666555 4456677888888889999
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHhh-ccccC
Q psy11396 779 FLHELTMHDYTFVNNPSVITNIERYFDK-SIKKN 811 (829)
Q Consensus 779 ~~~e~~~~~~~~~~~~~~~e~~~~~~~k-~~~~~ 811 (829)
++.|...+..++ .+++.++.+..|+-+ +.|+.
T Consensus 262 l~~E~~~~~~~~-~s~~~~~~~~~f~~~~~~~~~ 294 (699)
T TIGR02440 262 LDAEARAFGELV-MTPESAALRSIFFATTEMKKE 294 (699)
T ss_pred HHHHHHHHHHhc-CCHHHHHHHHHHHHHHHhcCC
Confidence 999999999999 799999999999854 44444
No 111
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=99.97 E-value=1.4e-31 Score=255.93 Aligned_cols=224 Identities=19% Similarity=0.276 Sum_probs=189.9
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCC--C-CeeeccCChhhhhhhh-----cccccccccccccccccCCCCE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGY--E-NYFACGGTKEGLLKIQ-----KGISRFTDEKSYCMPLYCKIPV 653 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~--g-~~F~~G~D~~~~~~~~-----~~~~~~~~~~~~~~~~~~~kp~ 653 (829)
+|++.+..+.||.++|..++.|+++.+||+||. | .+||+|+|-+.-.... +...+......-..++.+|||+
T Consensus 40 rNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY~~d~~~~rLnvLdlQrlIR~~PKpV 119 (282)
T COG0447 40 RNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYVDDDGIPRLNVLDLQRLIRTMPKPV 119 (282)
T ss_pred hccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCccCCccCcccchhhHHHHHHhCCcce
Confidence 678889999999999999999999999999985 4 7999999975433211 1111111122223344599999
Q ss_pred EEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcc
Q psy11396 654 IAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISM 733 (829)
Q Consensus 654 Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~ 733 (829)
||.|+|+++|||-.|-+.||+.|+++++.|+....++|.+-++.++..|+|.+|..+|+|+.++++.++|+||+++|+||
T Consensus 120 iA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VGqKkArEIwfLcR~Y~A~eal~MGlVN 199 (282)
T COG0447 120 IAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAEEALDMGLVN 199 (282)
T ss_pred EEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHhhhhhhHHhhhhhhhccHHHHHhcCcee
Confidence 99999999999999999999999999999999999999999888888999999999999999999999999999999999
Q ss_pred cccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396 734 PVLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS 807 (829)
Q Consensus 734 ~v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~ 807 (829)
.|||-++|++++.+|++.|...+|.++++.|..++..- +-...++........+++..++.+|+..+|+|||
T Consensus 200 ~Vvp~~~LE~e~v~W~~E~l~kSP~AlR~LK~Afnad~--DGlaG~q~~ag~at~L~YmTdEa~EGr~AF~eKR 271 (282)
T COG0447 200 TVVPHADLEKETVQWAREMLAKSPTALRMLKAAFNADC--DGLAGLQELAGNATLLYYMTDEAQEGRDAFLEKR 271 (282)
T ss_pred eeccHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCC--chhhHHHHhcccceEEEEechhhhhhHHHHhhcc
Confidence 99999999999999999999999999999999988542 2334444444445566678999999999999988
No 112
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=99.97 E-value=2.8e-31 Score=291.71 Aligned_cols=220 Identities=16% Similarity=0.250 Sum_probs=178.0
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc-c-----ccc-cccccccccCCCCEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS-R-----FTD-EKSYCMPLYCKIPVI 654 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~-~-----~~~-~~~~~~~~~~~kp~I 654 (829)
.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++........ . +.. ......+..+|||+|
T Consensus 30 lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~i~~~pKPvI 109 (381)
T PLN02988 30 LNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLGANFFSDEYMLNYVMATYSKAQV 109 (381)
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHCCCCEE
Confidence 577899999999999999999999999999999999999999998743211110 0 100 011123345999999
Q ss_pred EEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396 655 AAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP 734 (829)
Q Consensus 655 aav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~ 734 (829)
|+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|. .++++++||++++++||+++|||++
T Consensus 110 a~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~-~~~~l~LTG~~i~a~eA~~~GLv~~ 188 (381)
T PLN02988 110 SILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGF-FGEYVGLTGARLDGAEMLACGLATH 188 (381)
T ss_pred EEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHH-HHHHHHHcCCCCCHHHHHHcCCceE
Confidence 999999999999999999999999999999999999999999999999999997 6899999999999999999999999
Q ss_pred ccChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHh
Q psy11396 735 VLPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFD 805 (829)
Q Consensus 735 v~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~ 805 (829)
+||.+++.+.+.+++ +++..+|.++..+|+.+......... ...........++ ..+.+.+.++++.+
T Consensus 189 vv~~~~l~~~~~~la-~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~I~~~f-~~~~~~~i~~~L~~ 256 (381)
T PLN02988 189 FVPSTRLTALEADLC-RIGSNDPTFASTILDAYTQHPRLKPQ-SAYHRLDVIDRCF-SRRTVEEIISALER 256 (381)
T ss_pred ecCHhHHHHHHHHHH-HhhccCHHHHHHHHHHhhcCCCCCCc-hHHHHHHHHHHHh-CCCCHHHHHHHHHh
Confidence 999999999999988 78788899999999988743210111 1222355666667 45566666666553
No 113
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=99.97 E-value=3.8e-31 Score=275.53 Aligned_cols=189 Identities=19% Similarity=0.232 Sum_probs=157.9
Q ss_pred CCcccccccccccchhhhcccccce-eeeeeCCCCeeeccCChhhhhhhhccc---cccc--ccccccccccCCCCEEEE
Q psy11396 583 DLKNSTVVKGITDAFSYINSSVQYK-VIIITGYENYFACGGTKEGLLKIQKGI---SRFT--DEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 583 n~~~~~~~~eL~~~l~~~~~d~~vr-~vVl~g~g~~F~~G~D~~~~~~~~~~~---~~~~--~~~~~~~~~~~~kp~Iaa 656 (829)
|+++.+|+.+|.++++++++|++++ +||++|.|+.||+|.|++++....... .... ....+..+..+||||||+
T Consensus 21 Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 100 (239)
T PLN02267 21 HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAAGSAPSRLHLMVAKLRPLVADLISLPMPTIAA 100 (239)
T ss_pred CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhccccCHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 5689999999999999999998875 777799999999999998764211100 0000 112233455699999999
Q ss_pred ecccccchhhhhhhcccccccc-ccceeccccccccccCCCcceeccccccCHHHH-HHHHhcCCccCHHHHHHcCCccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFS-EESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS-REILFTASEFKGKELKERGISMP 734 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~-~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a-~e~ll~g~~~~a~eA~~~GLv~~ 734 (829)
|||+|+|||++|+++||+||++ ++++|++||+++|++++++++.++++++|..++ ++++++|++|+++||+++||||+
T Consensus 101 V~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~~~a~~~llltG~~~~a~eA~~~Glv~~ 180 (239)
T PLN02267 101 VTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSPAARRDVLLRAAKLTAEEAVEMGIVDS 180 (239)
T ss_pred ECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcChHHHHHHHHHcCCcCCHHHHHHCCCcce
Confidence 9999999999999999999998 568999999999997444457789999999999 69999999999999999999999
Q ss_pred ccC-hhhHHHHHHHHHHHHhcC--CHHHHHHHHHHHHhhh
Q psy11396 735 VLP-RKQVLFYSLKLAKKLSLL--SKKELELQKKYYSHSL 771 (829)
Q Consensus 735 v~~-~~~l~~~~~~~a~~i~~~--~~~a~~~~K~~l~~~~ 771 (829)
++| .+++.+++.+++++|+.. ++.++..+|+.++...
T Consensus 181 vv~~~~~l~~~a~~~A~~ia~~~~~~~~~~~~k~~~~~~~ 220 (239)
T PLN02267 181 AHDSAEETVEAAVRLGEELAARKWNGEVYASIRKSLLPEV 220 (239)
T ss_pred ecCCHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHH
Confidence 998 478999999999999987 6678999999987654
No 114
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=99.97 E-value=2.2e-30 Score=284.79 Aligned_cols=225 Identities=15% Similarity=0.223 Sum_probs=184.7
Q ss_pred cccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc--c----ccc-cccccccccCCCC
Q psy11396 580 ISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS--R----FTD-EKSYCMPLYCKIP 652 (829)
Q Consensus 580 l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~--~----~~~-~~~~~~~~~~~kp 652 (829)
-+.|++|.+|+.+|..+++.+++|+++++|||+|.|++||+|+|++.+........ . +.. ......+..+|||
T Consensus 61 ~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~i~~~pKP 140 (407)
T PLN02851 61 SSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINEGNVEECKLFFENLYKFVYLQGTYLKP 140 (407)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34688999999999999999999999999999999999999999998754221110 0 000 1111223359999
Q ss_pred EEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCc
Q psy11396 653 VIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGIS 732 (829)
Q Consensus 653 ~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv 732 (829)
+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|. .++++++||++++++||+++||+
T Consensus 141 vIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~-~g~~L~LTG~~i~a~eA~~~GLa 219 (407)
T PLN02851 141 NVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGY-LGEYLALTGQKLNGVEMIACGLA 219 (407)
T ss_pred EEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCH-HHHHHHHhCCcCCHHHHHHCCCc
Confidence 99999999999999999999999999999999999999999999999999999997 49999999999999999999999
Q ss_pred ccccChhhHHHHHHH----------------------------------------------------------------H
Q psy11396 733 MPVLPRKQVLFYSLK----------------------------------------------------------------L 748 (829)
Q Consensus 733 ~~v~~~~~l~~~~~~----------------------------------------------------------------~ 748 (829)
++++|.+++.. +++ |
T Consensus 220 ~~~v~~~~l~~-l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~sv~~I~~~L~~~~~~~~~~w 298 (407)
T PLN02851 220 THYCLNARLPL-IEERLGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDTVEEIIEALENEAASSYDEW 298 (407)
T ss_pred eeecCHhhHHH-HHHHHHhhccCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHhCCCCHHHHHHHHHhcccccchHH
Confidence 99998664421 000 1
Q ss_pred H----HHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhc--CChHHHHHHHHHHhh
Q psy11396 749 A----KKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFV--NNPSVITNIERYFDK 806 (829)
Q Consensus 749 a----~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~~~~~e~~~~~~~k 806 (829)
+ +.|.+.+|.++..+.+++++....++.+.+++|......++. ..+|+.|++++.+-.
T Consensus 299 a~~~~~~l~~~SP~Sl~vt~~~~~~~~~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA~LID 362 (407)
T PLN02851 299 CKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLAREYRISLCGVSKWVSGDFCEGVRARLVD 362 (407)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhcC
Confidence 1 224456777888888888888778899999999998888763 478999999998853
No 115
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.97 E-value=1.4e-28 Score=260.41 Aligned_cols=247 Identities=29% Similarity=0.436 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC-CCcceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL-QGPCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl-~Gp~~tv 280 (829)
.+.|+.+|+++||+++|+++++++ ++++|+..+++. .+..+.+++..+|+ ++|+++|
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~----~li~~~~~~~~~------------------~~~~a~~i~~~lg~~~~~~~~i 64 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIV----GVIVGTTGGSGE------------------FSGAAGQLAYHLGISGGPAYSV 64 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCce----EEEEEECCCCcc------------------ccHHHHHHHHHhCCCCCCccee
Confidence 678999999999999999988887 999997765431 34567899999999 8999999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK 360 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~ 360 (829)
+.+|+|++.||+.|+++|++|++|.+||+|+|. +++|||++++||++.+
T Consensus 65 ~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~-------------------------------~~~gdGAaa~vL~~~~ 113 (254)
T cd00327 65 NQACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------------------FVFGDGAAAAVVESEE 113 (254)
T ss_pred ccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce-------------------------------eeecceEEEEEECcHH
Confidence 999999999999999999999999999999997 6789999999999999
Q ss_pred hhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcc
Q psy11396 361 DAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNK 440 (829)
Q Consensus 361 ~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~ 440 (829)
.+.+++.+++++|.++....++.... ..+......++++++|+++|++++|||++++|++++...|..|..+....++.
T Consensus 114 ~a~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~ 192 (254)
T cd00327 114 HALRRGAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGV 192 (254)
T ss_pred HHHHCCCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCC
Confidence 99999999999999998877765432 35667889999999999999999999999999999999999998887665542
Q ss_pred cCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEE
Q psy11396 441 FSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMA 520 (829)
Q Consensus 441 ~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a 520 (829)
..+++.+.+..+||+.+|+|...+..++.+++++.+||. ....+++
T Consensus 193 -----~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~-----------------------------~~~~~~~ 238 (254)
T cd00327 193 -----RSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT-----------------------------PREPRTV 238 (254)
T ss_pred -----CCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC-----------------------------CCCcCEE
Confidence 236889999999999999999999999999999999981 0124679
Q ss_pred EEeccCCCCceEEEEe
Q psy11396 521 AINSFGFSGTNAHIVL 536 (829)
Q Consensus 521 ~v~s~G~gG~na~~vl 536 (829)
++++||+||+++++||
T Consensus 239 l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 239 LLLGFGLGGTNAAVVL 254 (254)
T ss_pred EEeeEcCCCcceEEEC
Confidence 9999999999999986
No 116
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=99.96 E-value=4.3e-30 Score=305.26 Aligned_cols=227 Identities=16% Similarity=0.176 Sum_probs=187.7
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhc-cc-c--cc--cccccccccccCCCCEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQK-GI-S--RF--TDEKSYCMPLYCKIPVIA 655 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~-~~-~--~~--~~~~~~~~~~~~~kp~Ia 655 (829)
.|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++..... .. . .+ .....+..+..+||||||
T Consensus 28 ~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIA 107 (714)
T TIGR02437 28 VNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFALPDAELIQWLLFANSIFNKLEDLPVPTVA 107 (714)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 578899999999999999999999999999999999999999998753110 00 0 00 011223344569999999
Q ss_pred EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV 735 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v 735 (829)
+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|..+|++++++|++++++||+++||||++
T Consensus 108 ai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~~A~~llltG~~~~A~eA~~~GLvd~v 187 (714)
T TIGR02437 108 AINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALEWIASGKENRAEDALKVGAVDAV 187 (714)
T ss_pred EECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCCcEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHHHHHhcC---------C---------HHH---HH------------------HHHHHHHhhhhCCHH
Q psy11396 736 LPRKQVLFYSLKLAKKLSLL---------S---------KKE---LE------------------LQKKYYSHSLQKKLS 776 (829)
Q Consensus 736 ~~~~~l~~~~~~~a~~i~~~---------~---------~~a---~~------------------~~K~~l~~~~~~~~~ 776 (829)
+|.+++.+++.++++++... + +.. .. ..-+.+......+++
T Consensus 188 v~~~~l~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pap~~~~~~v~~~~~~~~~ 267 (714)
T TIGR02437 188 VTADKLGAAALQLLKDAINGKLDWKAKRQPKLEPLKLSKIEAMMSFTTAKGMVAQVAGPHYPAPMTAVKTIEKAARFGRD 267 (714)
T ss_pred eChhHHHHHHHHHHHHHhhcCCcccccCCCCcccccccchHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhcCCHH
Confidence 99999999999999774421 0 000 00 111233444445688
Q ss_pred HHHHHHHHHHHhhhcCChHHHHHHHHHHhhccc
Q psy11396 777 TIFLHELTMHDYTFVNNPSVITNIERYFDKSIK 809 (829)
Q Consensus 777 ~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~~~ 809 (829)
+++..|.+.|.+++ .+++.+..+..|+.++..
T Consensus 268 ~gl~~E~~~f~~l~-~s~~a~~l~~~ff~~r~~ 299 (714)
T TIGR02437 268 KALEIEAKGFVKLA-KTSEAKALIGLFLNDQYV 299 (714)
T ss_pred HHHHHHHHHHHHHh-CCHHHHHHHHHHhhhHhh
Confidence 99999999999999 899999999999866543
No 117
>KOG1682|consensus
Probab=99.96 E-value=1.9e-29 Score=238.77 Aligned_cols=226 Identities=17% Similarity=0.227 Sum_probs=198.8
Q ss_pred cccCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhccccc---cccc-ccccccccCCCCEEE
Q psy11396 580 ISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISR---FTDE-KSYCMPLYCKIPVIA 655 (829)
Q Consensus 580 l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~---~~~~-~~~~~~~~~~kp~Ia 655 (829)
-..|+++.+|+.+|.+.+....+..++|+|||+..|+.||+|.|++++..-...... |+.. ..+..+..+|.|+|+
T Consensus 51 Kk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKELt~e~g~d~haevFqtc~dvmn~Irn~pVPVia 130 (287)
T KOG1682|consen 51 KKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKELTNEPGSDIHAEVFQTCTDVMNDIRNLPVPVIA 130 (287)
T ss_pred cccchhhHHHHHHHHHHHhhcccccceeEEEEecCCccccccccHHHhhcCccchHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 445677899999999999999999999999999999999999999998643322111 1111 223345559999999
Q ss_pred EecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCcccc
Q psy11396 656 AMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPV 735 (829)
Q Consensus 656 av~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v 735 (829)
.|||.|.++|+.|...||++|++++++|..|...+|+++..-|. -|+|.+++..+.+|++||.+|+++||+..|||+++
T Consensus 131 ~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGv-AlaRavpRkva~~ML~Tg~Pi~~eeAl~sGlvskv 209 (287)
T KOG1682|consen 131 KVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGV-ALARAVPRKVAAYMLMTGLPITGEEALISGLVSKV 209 (287)
T ss_pred EecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcch-hHhhhcchhHHHHHHHhCCCCchHHHHHhhhhhhc
Confidence 99999999999999999999999999999999999998876665 48899999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396 736 LPRKQVLFYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS 807 (829)
Q Consensus 736 ~~~~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~ 807 (829)
||.++++.+++++++.|...+...+...|+..-.....+-.++++...+.+.+.+ .-.+.+|+|.+|++||
T Consensus 210 Vp~~el~~e~~~i~~~i~~~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n~-ql~d~kegiasf~~kr 280 (287)
T KOG1682|consen 210 VPAEELDKEIEEITNAIKAKSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCENF-QLGDTKEGIASFFEKR 280 (287)
T ss_pred CCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcc-cccchHHHHHHHhccC
Confidence 9999999999999999999999999999999888887777888888888888888 6779999999999987
No 118
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=99.96 E-value=4.7e-29 Score=296.92 Aligned_cols=229 Identities=16% Similarity=0.233 Sum_probs=184.3
Q ss_pred cCCcccccccccccchhhhcccccceee-eeeCCCCeeeccCChhhhhhhhcccc--cc--cccccccccccCCCCEEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVI-IITGYENYFACGGTKEGLLKIQKGIS--RF--TDEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~v-Vl~g~g~~F~~G~D~~~~~~~~~~~~--~~--~~~~~~~~~~~~~kp~Iaa 656 (829)
.|++|.+|+.+|.++++.++.|+++|++ |++|.|++||+|+|++++........ .+ .....+..+..+||||||+
T Consensus 35 ~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAa 114 (737)
T TIGR02441 35 VNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAACKTAQEVTQLSQEGQEMFERIEKSQKPIVAA 114 (737)
T ss_pred CCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhccCChHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 5889999999999999999999999965 56999999999999998753111000 00 0112233455699999999
Q ss_pred ecccccchhhhhhhcccccccccc--ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEE--SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMP 734 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~--a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~ 734 (829)
|||+|+|||++|+++|||||++++ ++|++||+++|++|++|++++|+|++|..+|++++++|++++++||+++||||+
T Consensus 115 v~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~~~A~~l~ltG~~i~a~eA~~~GLVd~ 194 (737)
T TIGR02441 115 ISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVPAALDMMLTGKKIRADRAKKMGIVDQ 194 (737)
T ss_pred ECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCHHHHHHHHHcCCcCCHHHHHHCCCCeE
Confidence 999999999999999999999998 589999999999999999999999999999999999999999999999999999
Q ss_pred ccCh-------------hhHHHHHHHHHHHHhcCC----------HH--------------HH-----------------
Q psy11396 735 VLPR-------------KQVLFYSLKLAKKLSLLS----------KK--------------EL----------------- 760 (829)
Q Consensus 735 v~~~-------------~~l~~~~~~~a~~i~~~~----------~~--------------a~----------------- 760 (829)
|+|+ +++.+.+.+++++++... +. ..
T Consensus 195 vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~A 274 (737)
T TIGR02441 195 LVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANGKLSINRDKGLVHKITQYVMTNPFVRQQVYKTAEDKVMKQTKGLYPA 274 (737)
T ss_pred ecCCcccccccchhhhHHHHHHHHHHHHHHhhcccCCccccccccCccchhhcccchhHHHHHHHHHHHHHHhccCCCcc
Confidence 9986 557888888887754311 00 01
Q ss_pred -HHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhh-ccccC
Q psy11396 761 -ELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDK-SIKKN 811 (829)
Q Consensus 761 -~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k-~~~~~ 811 (829)
...-+.+......++++++..|.+.|.+++ .+++.+.-+..|+-. ..||.
T Consensus 275 p~~~l~~v~~~~~~~~~~gl~~E~~~f~~l~-~s~~a~al~~~f~~~~~~~~~ 326 (737)
T TIGR02441 275 PLKILDVVRTGYDQGPDAGYEAESKAFGELS-MTFESKALIGLFHGQTDCKKN 326 (737)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHccCC
Confidence 122334444445578999999999999999 799999999998844 44443
No 119
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=99.95 E-value=1.9e-28 Score=279.13 Aligned_cols=178 Identities=19% Similarity=0.203 Sum_probs=152.9
Q ss_pred cccCCcccccccccccchhhhc-ccccceeeeeeCC-CCeeeccCChhhhhhhhccccc-cc-c-----cccccccccCC
Q psy11396 580 ISKDLKNSTVVKGITDAFSYIN-SSVQYKVIIITGY-ENYFACGGTKEGLLKIQKGISR-FT-D-----EKSYCMPLYCK 650 (829)
Q Consensus 580 l~~n~~~~~~~~eL~~~l~~~~-~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~~~~-~~-~-----~~~~~~~~~~~ 650 (829)
-+.|++|.+|+.+|.++++.++ +++++|+|||||. |++||+|+|++++......... .. . ......+..+|
T Consensus 40 ~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~DL~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~p 119 (546)
T TIGR03222 40 LKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNGIEDSSRHSG 119 (546)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcCHHHHhccccchhhhHHHHHHHHHHHHHHHHHhCC
Confidence 3568899999999999999999 7899999999987 6999999999886432111000 00 0 00111233599
Q ss_pred CCEEEEecccccchhhhhhhcccccccccc--ceecccccc-ccccCCCcceeccc--cccCHHHHHHHHhcCCccCHHH
Q psy11396 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEE--SVYQSPYMR-YGFTPGAGSTLIFP--QRFGKILSREILFTASEFKGKE 725 (829)
Q Consensus 651 kp~Iaav~G~a~GgG~~lal~cD~~ia~~~--a~f~~~e~~-~Gl~p~~g~~~~l~--r~iG~~~a~e~ll~g~~~~a~e 725 (829)
|||||+|||+|+|||++|+++||+||++++ ++|++||++ +|++|+++++.+++ +++|..+|++++++|++|+++|
T Consensus 120 kPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P~~gg~~~l~~~~~vg~~~A~~llltG~~i~A~e 199 (546)
T TIGR03222 120 LKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRRVRRDHADIFCTIEEGVRGKR 199 (546)
T ss_pred CCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCCccchhhhccccchhCHHHHHHHHHcCCCccHHH
Confidence 999999999999999999999999999987 799999997 99999999998887 6999999999999999999999
Q ss_pred HHHcCCcccccChhhHHHHHHHHHHHHhcCCH
Q psy11396 726 LKERGISMPVLPRKQVLFYSLKLAKKLSLLSK 757 (829)
Q Consensus 726 A~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~ 757 (829)
|++|||||+|||++++++++.+++++|+..+|
T Consensus 200 A~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p 231 (546)
T TIGR03222 200 AKEWRLVDEVVKPSQFDAAIAERAAELAAQSD 231 (546)
T ss_pred HHHcCCceEEeChHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999998877
No 120
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=99.94 E-value=3.3e-28 Score=247.13 Aligned_cols=171 Identities=26% Similarity=0.461 Sum_probs=152.1
Q ss_pred cCCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccc---cc--cccccccccccCCCCEEEE
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGIS---RF--TDEKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~---~~--~~~~~~~~~~~~~kp~Iaa 656 (829)
.|++|.+++++|.++++.++.|+++++|||+|.|+.||+|.|+.++........ .+ .....+..+..+||||||+
T Consensus 20 ~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~Ia~ 99 (195)
T cd06558 20 RNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAGEEARAFIRELQELLRALLRLPKPVIAA 99 (195)
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhcccccchhHHHHHHHHHHHHHHHHcCCCCEEEE
Confidence 688899999999999999999999999999999999999999998865443321 10 1122233344599999999
Q ss_pred ecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCCccccc
Q psy11396 657 MQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGISMPVL 736 (829)
Q Consensus 657 v~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~ 736 (829)
|||+|.|+|++++++||+||++++++|++||+++|++|+.+++++|++++|.+++++++++|+.++++||+++|||++++
T Consensus 100 v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~~~l~g~~~~a~ea~~~Glv~~~~ 179 (195)
T cd06558 100 VNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELLLTGRRISAEEALELGLVDEVV 179 (195)
T ss_pred ECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHH
Q psy11396 737 PRKQVLFYSLKLAKKL 752 (829)
Q Consensus 737 ~~~~l~~~~~~~a~~i 752 (829)
+.+++.+++.++++++
T Consensus 180 ~~~~l~~~a~~~a~~~ 195 (195)
T cd06558 180 PDEELLAAALELARRL 195 (195)
T ss_pred ChhHHHHHHHHHHhhC
Confidence 9999999999988763
No 121
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=99.94 E-value=6.2e-28 Score=276.02 Aligned_cols=178 Identities=17% Similarity=0.223 Sum_probs=153.0
Q ss_pred ccCCcccccccccccchhhhc-ccccceeeeeeCC-CCeeeccCChhhhhhhhccccc-ccc-c-----ccccccccCCC
Q psy11396 581 SKDLKNSTVVKGITDAFSYIN-SSVQYKVIIITGY-ENYFACGGTKEGLLKIQKGISR-FTD-E-----KSYCMPLYCKI 651 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~-~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~~~~-~~~-~-----~~~~~~~~~~k 651 (829)
+.|+++.+|+.+|.+++++++ +++++|+|||+|. |++||+|+|++.+......... +.. . .....+..+||
T Consensus 45 ~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~pk 124 (550)
T PRK08184 45 KLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANIFMLGGSSHAWKVNFCKFTNETRNGIEDSSRHSGL 124 (550)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCHHhHhccccchhhhHHHHHHHHHHHHHHHHHhCCC
Confidence 568899999999999999998 7899999999998 5899999999876432111000 000 0 01122345999
Q ss_pred CEEEEecccccchhhhhhhcccccccccc--ceecccccc-ccccCCCcceeccc--cccCHHHHHHHHhcCCccCHHHH
Q psy11396 652 PVIAAMQGHAIGAGWAMGLFCDYTIFSEE--SVYQSPYMR-YGFTPGAGSTLIFP--QRFGKILSREILFTASEFKGKEL 726 (829)
Q Consensus 652 p~Iaav~G~a~GgG~~lal~cD~~ia~~~--a~f~~~e~~-~Gl~p~~g~~~~l~--r~iG~~~a~e~ll~g~~~~a~eA 726 (829)
||||+|||+|+|||++|+++|||||++++ ++|++||++ +|++|+++++++++ +++|+.++++++++|+.++++||
T Consensus 125 PvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P~~gg~~rl~~~~~vg~~~A~~llltG~~i~AeeA 204 (550)
T PRK08184 125 KFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRKVRRDLADIFCTIEEGVRGKRA 204 (550)
T ss_pred CEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCCCcchHHHhhhhhhcCHHHHHHHHHhCCcccHHHH
Confidence 99999999999999999999999999987 899999997 99999999999998 77999999999999999999999
Q ss_pred HHcCCcccccChhhHHHHHHHHHHHHhcCCHH
Q psy11396 727 KERGISMPVLPRKQVLFYSLKLAKKLSLLSKK 758 (829)
Q Consensus 727 ~~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~~ 758 (829)
++|||||++||++++++++.+++++|+..+|.
T Consensus 205 ~~~GLVd~vv~~d~l~~~a~~~A~~ia~~~~~ 236 (550)
T PRK08184 205 VDWRLVDEVVKPSKFDAKVAERAAELAAASDR 236 (550)
T ss_pred HHcCCccEeeCHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999988764
No 122
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.92 E-value=7.6e-24 Score=236.88 Aligned_cols=265 Identities=14% Similarity=0.172 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+.+|+++||+|+|+++++++ .+++|+....+ ..+ ..+..++..+|+. -|+++|
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID----~vi~g~~~~~~-----------------~~~-~~a~~va~~lGl~~~~p~~~V 84 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVD----EVILGQVLTAG-----------------AGQ-NPARQAAIKAGLPHSVPAMTL 84 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEEecCCC-----------------CCC-cHHHHHHHHcCCCCCcceEEe
Confidence 46899999999999999999999 88888653211 011 2455688899996 499999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------------HHH-----H-HH-cCCC--------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------------HIK-----M-SK-SGML-------- 329 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------------~~~-----~-~~-~g~l-------- 329 (829)
+++|+|++.|++.|+++|++|.+|++||+|+|.++.... ... + .. .+..
T Consensus 85 ~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~ 164 (393)
T PRK05656 85 NKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAENL 164 (393)
T ss_pred cccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHHHHH
Confidence 999999999999999999999999999999997764210 000 0 00 0000
Q ss_pred ------C-------------------CCCCCC----CCCC--------------------------------CCCCcc--
Q psy11396 330 ------S-------------------PDGHCY----SFDQ--------------------------------RANGFV-- 346 (829)
Q Consensus 330 ------s-------------------~~~~~~----pfd~--------------------------------~~~G~~-- 346 (829)
+ +.+..+ |+.. ..+|.+
T Consensus 165 ~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~~~~~g~lt~ 244 (393)
T PRK05656 165 VEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVTA 244 (393)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCCCcCCCCCEEc
Confidence 0 111110 1100 012333
Q ss_pred -----cccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396 347 -----PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421 (829)
Q Consensus 347 -----~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt 421 (829)
++|||+++||++++.|+++|.+|+++|.|++.... .+.+.+.+...+++++|+++|++|+|||++|+|++
T Consensus 245 ~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~dId~~e~~d~ 319 (393)
T PRK05656 245 GNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGV-----DPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEA 319 (393)
T ss_pred cccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecC-----CCcccchhHHHHHHHHHHHcCCCHHHCCEEEecCc
Confidence 89999999999999999999999999999988643 12233456778999999999999999999999965
Q ss_pred CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF 501 (829)
Q Consensus 422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~ 501 (829)
+.+|..++.+.|+-. ..++++++.|..+|||.||+|+..++.++++|+.
T Consensus 320 -----f~~~~~~~~e~lg~~---~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~----------------------- 368 (393)
T PRK05656 320 -----FAAQSLAVGKELGWD---AAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR----------------------- 368 (393)
T ss_pred -----cHHHHHHHHHHhCCC---CccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH-----------------------
Confidence 556777878888731 3467899999999999999999999999998864
Q ss_pred eeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
...|+++++...-||.-+++|||.
T Consensus 369 -------------~~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 369 -------------RDAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred -------------cCCCEEEEEEcccCcceEEEEEec
Confidence 124678999999999999999985
No 123
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.91 E-value=1.6e-23 Score=234.95 Aligned_cols=285 Identities=20% Similarity=0.224 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv 280 (829)
...|+.+++++||+|||+++++++ ++++|+..+++.. .....+..++..+|++ +|.++|
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id----~vi~g~~~~~~~~----------------~~~~~a~~va~~lGl~~~~~~~v 81 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDID----AMYVGNMSAGLFV----------------SQEHIAALIADYAGLAPIPATRV 81 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc----------------ccccHHHHHHHHcCCCCCCeeEE
Confidence 356899999999999999999998 7888765433210 0112456788999997 699999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH--H-----------------------HHH------HHcCCC
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI--H-----------------------IKM------SKSGML 329 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~--~-----------------------~~~------~~~g~l 329 (829)
+++|+|++.||..|+++|++|++|++||+|+|.+..... . ..+ .+.|.-
T Consensus 82 ~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s 161 (389)
T PRK06064 82 EAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTT 161 (389)
T ss_pred eCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCC
Confidence 999999999999999999999999999999987542110 0 000 000000
Q ss_pred -----------------CCCC----------------CCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEe
Q psy11396 330 -----------------SPDG----------------HCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGW 376 (829)
Q Consensus 330 -----------------s~~~----------------~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~ 376 (829)
.|.. .+.|+. ..+...++|||+++||++++.|++++.++ ++|.|+
T Consensus 162 ~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~-~~d~~~~~dGAaa~vL~s~~~A~~~~~~~-v~I~g~ 239 (389)
T PRK06064 162 EEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLK-LLDCSPITDGAAAVILASEEKAKEYTDTP-VWIKAS 239 (389)
T ss_pred HHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCc-hhhcCCCCCcceEEEEecHHHHHHhcCCC-eEEEEE
Confidence 0000 001111 23556889999999999999999987655 589999
Q ss_pred eeecCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH--------hc-ccCCCC
Q psy11396 377 GVNQDGKTNGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES--------FN-KFSYHK 445 (829)
Q Consensus 377 ~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~--------~~-~~~~~~ 445 (829)
+..++..+... ..+...+...++++||+++|++|+|||++|+|+++|.. +.++.+++.-+ +. +.....
T Consensus 240 g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~~-~~~~~e~lgl~~~G~~~~~~~~g~~~~~ 318 (389)
T PRK06064 240 GQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIA-EILAYEDLGFAKKGEGGKLAREGQTYIG 318 (389)
T ss_pred EEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcHH-HHHHHHHcCCCCCCchHHHHHCCCccCC
Confidence 98877654321 11234566789999999999999999999999999963 44444444211 11 111112
Q ss_pred CccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCC--CCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEE
Q psy11396 446 NFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKV--LPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAA 521 (829)
Q Consensus 446 ~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~--ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~ 521 (829)
..+||+..++. .|||.+|+|+.+++++++||+.+- -.. +-...++++
T Consensus 319 g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~~g~r-----------------------------qv~~a~~~l 369 (389)
T PRK06064 319 GDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAEKGRQ-----------------------------QVIGAGYGL 369 (389)
T ss_pred CCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCCCCCc-----------------------------cCCCccEEE
Confidence 35788888887 599999999999999999999852 110 012357899
Q ss_pred EeccC-CCCceEEEEeee
Q psy11396 522 INSFG-FSGTNAHIVLME 538 (829)
Q Consensus 522 v~s~G-~gG~na~~vl~e 538 (829)
+.++| .+.+++.+||+.
T Consensus 370 ~~~~g~~~~~~~~~vl~~ 387 (389)
T PRK06064 370 THNVGGTGHTAVVHILSR 387 (389)
T ss_pred EecCCCccceEEEEEEEe
Confidence 99988 445666777754
No 124
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.91 E-value=2.3e-23 Score=233.33 Aligned_cols=265 Identities=18% Similarity=0.227 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--ccee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t 279 (829)
...|+.+|+++||+|||+++++|| ++++|+..+++. ....+..++..+|++. |+++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID----~vi~~~~~~~~~------------------~~~~a~~v~~~lGl~~~~~~~~ 79 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVD----DVIMGNVLQAGE------------------GQNPARQAALLAGLPESVPATT 79 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC----EEEEEeccCCCC------------------CChHHHHHHHHcCCCCCCchhh
Confidence 367999999999999999999998 888876543331 1123556888899974 8999
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH------HH---------HHcCCCC--------------
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI------KM---------SKSGMLS-------------- 330 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~------~~---------~~~g~ls-------------- 330 (829)
|+++|+|++.||..|+++|++|.+|.+||+|+|.++...... .+ ...+...
T Consensus 80 v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~ 159 (386)
T cd00751 80 VNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENV 159 (386)
T ss_pred hccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHH
Confidence 999999999999999999999999999999998763211000 00 0000000
Q ss_pred -------------------------C-------------------------CCCCCC-------------CC-----CCC
Q psy11396 331 -------------------------P-------------------------DGHCYS-------------FD-----QRA 342 (829)
Q Consensus 331 -------------------------~-------------------------~~~~~p-------------fd-----~~~ 342 (829)
+ +...++ |+ ...
T Consensus 160 ~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~ 239 (386)
T cd00751 160 AEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAG 239 (386)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCC
Confidence 0 000000 01 113
Q ss_pred CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396 343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG 422 (829)
Q Consensus 343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg 422 (829)
+.+.++||++++||++++.|++++.+++++|+|++.++++.. +...+...++++||++||++|+|||++|+|+++
T Consensus 240 d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f 314 (386)
T cd00751 240 NASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPA-----IMGIGPVPAIPKALKRAGLTLDDIDLIEINEAF 314 (386)
T ss_pred cCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCc-----ccchhHHHHHHHHHHHcCCCHHHcCEEEeechh
Confidence 346679999999999999999999999999999999877543 223456789999999999999999999999776
Q ss_pred CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396 423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF 502 (829)
Q Consensus 423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~ 502 (829)
+. .|... .+.|+-. ..+++++..+...||+.||+|+.++++++++|+..
T Consensus 315 ~~----~~~~~-~e~lg~~---~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~----------------------- 363 (386)
T cd00751 315 AA----QALAC-LKELGLD---PEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR----------------------- 363 (386)
T ss_pred HH----HHHHH-HHHhCCC---hhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc-----------------------
Confidence 52 13332 3344421 12355666666789999999999999999999862
Q ss_pred eccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
..++++++..+-||..+++|||
T Consensus 364 -------------~~~~gl~~~~~~gg~g~~~~ie 385 (386)
T cd00751 364 -------------GGRYGLATMCIGGGQGAAMVIE 385 (386)
T ss_pred -------------CCCEEEEEEcccccceEEEEEE
Confidence 2367999999999999999998
No 125
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.91 E-value=4.5e-23 Score=228.92 Aligned_cols=263 Identities=17% Similarity=0.175 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+.++.+++|+|+|+++++++ .+|+|...... .....+..++...|+. -|+++|
T Consensus 28 ~~L~~~a~~~al~~agi~~~~Id----~vv~G~~~~~~------------------~g~~~~r~~~~~~Gl~~~~p~~~V 85 (392)
T PRK06633 28 PMLAAHLIKDILQNSKIDPALVN----EVILGQVITGG------------------SGQNPARQTLIHAGIPKEVPGYTI 85 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEEecCccc------------------cccHHHHHHHHHCCCCCCccchhh
Confidence 34788999999999999999999 78888543211 0123445677888985 499999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccC-hHH-H-H---------H-----HHHc-CCCC------------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINT-PDI-H-I---------K-----MSKS-GMLS------------ 330 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~~-~-~---------~-----~~~~-g~ls------------ 330 (829)
+++|+||+.|+..|+++|++|++|++||||+|.++. |.. . . . +... ....
T Consensus 86 ~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~ 165 (392)
T PRK06633 86 NKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENIS 165 (392)
T ss_pred cchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHHHHHHH
Confidence 999999999999999999999999999999998763 210 0 0 0 0000 0000
Q ss_pred ------------------------CCCC-CC----CC---------------------------------CC-----CCC
Q psy11396 331 ------------------------PDGH-CY----SF---------------------------------DQ-----RAN 343 (829)
Q Consensus 331 ------------------------~~~~-~~----pf---------------------------------d~-----~~~ 343 (829)
+... .+ |. +. ..+
T Consensus 166 ~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~~~~g~lt~~n 245 (392)
T PRK06633 166 KQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAFDKNGVVTAGN 245 (392)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCccCCCCCEechh
Confidence 0000 00 11 10 011
Q ss_pred CcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy11396 344 GFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGT 423 (829)
Q Consensus 344 G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt 423 (829)
.+.++|||+++||++++.|+++|.+++++|+|++...+... ..+.+...++++||+++|++|+||||+|.|
T Consensus 246 ~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~~-----~~~~~~~~a~~~Al~~AGl~p~DID~~ei~---- 316 (392)
T PRK06633 246 ASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDPS-----IMGTAPVPASQKALSKAGWSVNDLEVIEVN---- 316 (392)
T ss_pred cCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCcc-----hhchHHHHHHHHHHHHcCCCHHHcCeeehh----
Confidence 26789999999999999999999999999999998764322 122456789999999999999999999988
Q ss_pred CCCChHHHHHHHHHhccc--CCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396 424 KLGDPIEFEALCESFNKF--SYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF 501 (829)
Q Consensus 424 ~~gD~~E~~Al~~~~~~~--~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~ 501 (829)
|..++..++... .....++++++.|..+|||+||+|+++++.++++|++.
T Consensus 317 ------dafa~~~l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~---------------------- 368 (392)
T PRK06633 317 ------EAFAAQSIYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA---------------------- 368 (392)
T ss_pred ------hHHHHHHHHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc----------------------
Confidence 444444443211 11234578889999999999999999999999999761
Q ss_pred eeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++++++..+-||.-.++|||.
T Consensus 369 --------------~~~~g~~~~c~~gG~g~a~~~e~ 391 (392)
T PRK06633 369 --------------KAKKGLVTLCIGGGMGMAMCVEA 391 (392)
T ss_pred --------------CCCeEEEEEecccChhheEEEEe
Confidence 12468888888899999999985
No 126
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.91 E-value=5.9e-23 Score=229.00 Aligned_cols=265 Identities=18% Similarity=0.206 Sum_probs=197.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t 279 (829)
...|+.+++++||+|+|+++++++ .|++|+...++. ....++..++..+|+. .|+++
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID----~vi~G~~~~~~~-----------------~~~~~a~~i~~~lGl~~~~p~~~ 85 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVE----DVIMGCANPEGA-----------------TGANIARQIALRAGLPVTVPGMT 85 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----cEEEEEeecccc-----------------cccHHHHHHHHHcCCCCCCceee
Confidence 467899999999999999999998 688886543321 1123677888888985 79999
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------HH-----------HH-----HHcCCCC---
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------HI-----------KM-----SKSGMLS--- 330 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------~~-----------~~-----~~~g~ls--- 330 (829)
|+++|+||+.||+.|+++|++|++|++||||+|.++.... .. .. .....++
T Consensus 86 V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~~~i~r~~ 165 (392)
T PRK07108 86 VNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYGISKER 165 (392)
T ss_pred ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHHHHhCCCHHH
Confidence 9999999999999999999999999999999998764210 00 00 0000000
Q ss_pred ----------------C--------------CCCCCC---------------------------------CC----CCCC
Q psy11396 331 ----------------P--------------DGHCYS---------------------------------FD----QRAN 343 (829)
Q Consensus 331 ----------------~--------------~~~~~p---------------------------------fd----~~~~ 343 (829)
. ++...| |. ...+
T Consensus 166 ~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~~~g~lt~~n 245 (392)
T PRK07108 166 QDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSALPGGVITAGN 245 (392)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCCCCCCCcCCc
Confidence 0 000001 10 0123
Q ss_pred CcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy11396 344 GFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGT 423 (829)
Q Consensus 344 G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt 423 (829)
...++|||+++||++++.|+++|.+++++|+|++...+.. .+...+...++++||+++|++|+|||++|.|
T Consensus 246 ~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~Did~~ei~---- 316 (392)
T PRK07108 246 ASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEP-----DEMGIGPVFAVPKLLKQAGLKVDDIDLWELN---- 316 (392)
T ss_pred CCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccCC-----cccchhHHHHHHHHHHHcCCCHHHcCchHhh----
Confidence 3568999999999999999999999999999998875432 2233456789999999999999999999988
Q ss_pred CCCChHHHHHHHHHhc--ccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCe
Q psy11396 424 KLGDPIEFEALCESFN--KFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPF 501 (829)
Q Consensus 424 ~~gD~~E~~Al~~~~~--~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~ 501 (829)
|..++..++. .......++++++.+..+|||.||+|+..++.++.+|++.
T Consensus 317 ------eafa~~~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~~---------------------- 368 (392)
T PRK07108 317 ------EAFAVQVLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRR---------------------- 368 (392)
T ss_pred ------hHHHHHHHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHhh----------------------
Confidence 5555555542 1111234567777778889999999999999999999661
Q ss_pred eeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 502 FINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 502 ~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++++++..+-||.-+++|||.
T Consensus 369 --------------~~~~g~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 369 --------------GAKYVVVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred --------------CCCEEEEEEccccChhhEEEEEe
Confidence 13578889899999999999984
No 127
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.90 E-value=1.3e-22 Score=227.23 Aligned_cols=250 Identities=19% Similarity=0.196 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv 280 (829)
...|+.+++++||+|||+++++|+ ++++|+...+.. ....+..++..+|+.+ |.++|
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID----~vi~g~~~~~~~------------------~~~~a~~v~~~lGl~~~~~~~v 78 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIE----LVVVGSTAYRGI------------------ELYPAPIVAEYSGLTGKVPLRV 78 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc------------------cCChHHHHHHHhCCCCCCeeEE
Confidence 357999999999999999999998 888885432110 1123556888999976 77899
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH---H--------HHH--HcCC------------------C
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH---I--------KMS--KSGM------------------L 329 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~---~--------~~~--~~g~------------------l 329 (829)
+++|+|++.||..|+++|++|++|.+||+|+|.+...... . .+. ..|. +
T Consensus 79 ~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~ 158 (385)
T PRK12578 79 EAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGT 158 (385)
T ss_pred eccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999999976532100 0 000 0000 0
Q ss_pred C------------------CCCC----------------CCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEE
Q psy11396 330 S------------------PDGH----------------CYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKG 375 (829)
Q Consensus 330 s------------------~~~~----------------~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g 375 (829)
+ |... +.|+ ...+.+.++|||+++||++++.|++.+.+++++|+|
T Consensus 159 t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g 237 (385)
T PRK12578 159 TEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKELKIDSPVWITG 237 (385)
T ss_pred CHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEE
Confidence 0 1000 0011 123446689999999999999999988777789999
Q ss_pred eeeecCCCCCCC-CCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhc--c-----------
Q psy11396 376 WGVNQDGKTNGI-TAP-NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFN--K----------- 440 (829)
Q Consensus 376 ~~~~~dg~~~~~-~~p-~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~--~----------- 440 (829)
++..++...... ... ...+...++++||++||++|+|||++|.|+++| ..|..++... + .
T Consensus 238 ~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft----~~~l~~le~l-Gl~~~G~~~~~~~~G 312 (385)
T PRK12578 238 IGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFT----IAEIMGYEDL-GFTEKGKGGKFIEEG 312 (385)
T ss_pred EEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcCh----HHHHHHHHHc-CCCCCCchHHHHHCC
Confidence 998877543221 111 123566899999999999999999999999998 4466666533 2 1
Q ss_pred cCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396 441 FSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 441 ~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~ 479 (829)
.....+.+||+...+.+ |||.||+|+.+++.++++|+..
T Consensus 313 ~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ 353 (385)
T PRK12578 313 QSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDE 353 (385)
T ss_pred CccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCC
Confidence 11223456887777776 9999999999999999999874
No 128
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=99.90 E-value=2.1e-24 Score=200.35 Aligned_cols=118 Identities=43% Similarity=0.775 Sum_probs=100.0
Q ss_pred EEEEEEeeeecCC-CCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcc
Q psy11396 370 YCIIKGWGVNQDG-KTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFC 448 (829)
Q Consensus 370 ~a~I~g~~~~~dg-~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~ 448 (829)
||+|+|+++++|+ .+.....|++.++.++|++||+++|++|+|||||++||+||+.+|..|+.+|.++|+.... ..++
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~-~~~~ 79 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSAR-QQPV 79 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGG-TSTS
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhccccc-cccc
Confidence 6899999999999 7888999999999999999999999999999999999999999999999999999997543 4569
Q ss_pred ccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCC
Q psy11396 449 ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYN 488 (829)
Q Consensus 449 ~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~ 488 (829)
+|+++|+++||+++|||++++++++++|++++|||++||+
T Consensus 80 ~v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 80 PVGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EEE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred ceeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 9999999999999999999999999999999999999985
No 129
>PRK09051 beta-ketothiolase; Provisional
Probab=99.90 E-value=2.7e-22 Score=223.83 Aligned_cols=266 Identities=16% Similarity=0.202 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+.+|+++||+|+|+++++|+ .|++|+..+++. .....+..++...|+. .|+++|
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID----~vi~g~~~~~~~-----------------~~~~~a~~~~~~~Gl~~~~p~~~V 86 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVG----HVVFGHVIPTEP-----------------RDMYLSRVAAINAGVPQETPAFNV 86 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEeeeccccC-----------------CCccHHHHHHHHcCCCCCCceEEe
Confidence 46889999999999999999998 788886543221 0112334455667884 599999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------------HHH----HHH-c-C-CC--------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------------HIK----MSK-S-G-ML-------- 329 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------------~~~----~~~-~-g-~l-------- 329 (829)
+++|+||+.|++.|+++|++|.+|++||+|+|.++.... ... +.. . . .+
T Consensus 87 ~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 166 (394)
T PRK09051 87 NRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENVA 166 (394)
T ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHHHHHHHH
Confidence 999999999999999999999999999999998764211 000 000 0 0 00
Q ss_pred ------------------------------------------------CCCCCC------------CCCCC-------CC
Q psy11396 330 ------------------------------------------------SPDGHC------------YSFDQ-------RA 342 (829)
Q Consensus 330 ------------------------------------------------s~~~~~------------~pfd~-------~~ 342 (829)
.++... +|+.. ..
T Consensus 167 ~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~~~~~g~lt~~ 246 (394)
T PRK09051 167 AKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTAG 246 (394)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcccCCCccEeCC
Confidence 011111 11111 11
Q ss_pred CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396 343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG 422 (829)
Q Consensus 343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg 422 (829)
+...++|||+++||++++.|+++|.+++++|+|++....... +...+...+++++|++||++|+|||+||+|++
T Consensus 247 ~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~agi~~~did~~ei~d~- 320 (394)
T PRK09051 247 NASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDPE-----YMGIGPVPATQKALERAGLTVADLDVIEANEA- 320 (394)
T ss_pred cCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCC-----cccccHHHHHHHHHHHcCCCHHHcCEEEecCc-
Confidence 235568999999999999999999999999999998764322 22345678999999999999999999999965
Q ss_pred CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396 423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF 502 (829)
Q Consensus 423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~ 502 (829)
+.++..+..+.|+- ...+++++..+..+|||.||+|+..++.++.+|+++
T Consensus 321 ----f~~~~~~~~e~lg~---~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~----------------------- 370 (394)
T PRK09051 321 ----FAAQACAVTRELGL---DPAKVNPNGSGISLGHPVGATGAIITVKALYELQRI----------------------- 370 (394)
T ss_pred ----cHHHHHHHHHHhCC---CccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhc-----------------------
Confidence 33455556667763 122334444444579999999999999999999761
Q ss_pred eccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++++++...-||.-.++|||.
T Consensus 371 -------------~~~~g~~~~c~~gG~g~a~~~e~ 393 (394)
T PRK09051 371 -------------GGRYALVTMCIGGGQGIAAIFER 393 (394)
T ss_pred -------------CCCEEEEEEccccChhhEEEEEe
Confidence 23578888888899999999985
No 130
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.90 E-value=3.3e-22 Score=222.46 Aligned_cols=264 Identities=18% Similarity=0.210 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~tv 280 (829)
..|+.+|++++|+++|+++++++ -|++|+..+.+. ....++...+...|+ +-|+++|
T Consensus 29 ~dLa~~A~~~al~~agi~p~~ID----~vi~G~~~~~~~-----------------~~~~~~r~a~~~~Gl~~~~pa~~V 87 (402)
T PRK08242 29 VRLAAGLLEALRDRNGLDTAAVD----DVVLGCVTPVGD-----------------QGADIARTAVLAAGLPETVPGVQI 87 (402)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEEecCCCcc-----------------ccccHHHHHHHHcCCCCCCCeEEE
Confidence 35788899999999999999999 788886543211 112344455567787 3599999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-----------HHH----HHHcC------------------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-----------HIK----MSKSG------------------ 327 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-----------~~~----~~~~g------------------ 327 (829)
+.+|+|++.||..|+++|++|.+|++||+|+|.++.... ... +..+|
T Consensus 88 n~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~~~gisRe~~d 167 (402)
T PRK08242 88 NRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIATKYGFSREDVD 167 (402)
T ss_pred cchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHHHhCCCHHHHH
Confidence 999999999999999999999999999999998764221 000 00000
Q ss_pred -----------------C----------------CCCCCCCC-------------CCCCC--------------------
Q psy11396 328 -----------------M----------------LSPDGHCY-------------SFDQR-------------------- 341 (829)
Q Consensus 328 -----------------~----------------ls~~~~~~-------------pfd~~-------------------- 341 (829)
. +.++...| .|+..
T Consensus 168 ~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~~~~~~~~~~~ 247 (402)
T PRK08242 168 AYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEVERI 247 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccccccccccccc
Confidence 0 01111111 13221
Q ss_pred ------CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccE
Q psy11396 342 ------ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQL 415 (829)
Q Consensus 342 ------~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ 415 (829)
.+...++|||+++||++++.|+++|.+++++|.|++...+...... .+...+++++|+++|++++|||+
T Consensus 248 ~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~~~-----~~~~~a~~~al~~AGl~~~DID~ 322 (402)
T PRK08242 248 NHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTIML-----TGPVPATRKALAKAGLTVDDIDL 322 (402)
T ss_pred cCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhc-----ccHHHHHHHHHHHcCCCHHHCCE
Confidence 1344789999999999999999999999999999988765432222 22357999999999999999999
Q ss_pred EEecCCCCCCCChHHHHHH--HHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCcc
Q psy11396 416 LEAHGTGTKLGDPIEFEAL--CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH 493 (829)
Q Consensus 416 ve~hgtgt~~gD~~E~~Al--~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~ 493 (829)
+|.| |..+.+.+ .+.|+- ...++++++.+..+|||.||+|+..++.++++|+++
T Consensus 323 ~ei~-------daFa~~~l~~~e~lG~---~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~-------------- 378 (402)
T PRK08242 323 FELN-------EAFASVVLRFMQALDI---PHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR-------------- 378 (402)
T ss_pred EEec-------chhhHHHHHHHHHhCC---CCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 9998 55555443 344442 234577888888899999999999999999999761
Q ss_pred CCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 494 ~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++++++...=||+..++|||.
T Consensus 379 ----------------------~~~~g~~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 379 ----------------------GKRTALITLCVGGGMGIATIIER 401 (402)
T ss_pred ----------------------CCCeEEEEEcccCCceeEEEEEe
Confidence 23578888888899999999985
No 131
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.89 E-value=6.4e-22 Score=220.98 Aligned_cols=262 Identities=16% Similarity=0.255 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHHHHc-CCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396 203 QRLFLQNCWTCIEDA-GYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA 279 (829)
Q Consensus 203 ~~l~l~aa~~AL~dA-Gl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t 279 (829)
..|+.+|+++||+|+ |+++++|+ .|++|+...++. .....+..+...+|+. -|+++
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID----~vi~g~~~~~~~-----------------~~~~~ar~~~~~~Gl~~~~p~~~ 90 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIE----DAIVGCAMPEAE-----------------QGLNVARIGALLAGLPNSVGGVT 90 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCC----EEEEEecCCCCC-----------------CCchHHHHHHHHcCCCCCCceee
Confidence 568899999999997 99999999 888886543221 0112233345556885 47999
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH--------HHHHH---cCC----------------CC--
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH--------IKMSK---SGM----------------LS-- 330 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~--------~~~~~---~g~----------------ls-- 330 (829)
|+++|+||+.|+..|+++|++|++|++||+|+|.++..... ..+.. .+. ++
T Consensus 91 V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre 170 (399)
T PRK09052 91 VNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSRE 170 (399)
T ss_pred ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999987543200 00000 000 00
Q ss_pred ----------------CC-CCC----CC---------------------C----------------------C-----CC
Q psy11396 331 ----------------PD-GHC----YS---------------------F----------------------D-----QR 341 (829)
Q Consensus 331 ----------------~~-~~~----~p---------------------f----------------------d-----~~ 341 (829)
++ +.. .| + + ..
T Consensus 171 ~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~~g~lt~ 250 (399)
T PRK09052 171 DQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVTA 250 (399)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCccCCCCcEEC
Confidence 00 000 00 0 0 00
Q ss_pred CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396 342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421 (829)
Q Consensus 342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt 421 (829)
.+.+.++|||+++||++++.|+++|.+++++|.|++....... +...+...++++||++||++|+|||++|.|
T Consensus 251 ~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~~~-----~~~~~~~~A~~~al~~Agi~~~did~~ei~-- 323 (399)
T PRK09052 251 GNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPE-----IMGIGPIEAIPAALKQAGLKQDDLDWIELN-- 323 (399)
T ss_pred CccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccCCC-----ccchhHHHHHHHHHHHcCCCHHHcCEEEeC--
Confidence 1226789999999999999999999999999999998754322 223356789999999999999999999987
Q ss_pred CCCCCChHHHHHH--HHHhcccCCCCCccccCCccc--CcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcC
Q psy11396 422 GTKLGDPIEFEAL--CESFNKFSYHKNFCALGSVKS--NIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLE 497 (829)
Q Consensus 422 gt~~gD~~E~~Al--~~~~~~~~~~~~~~~v~s~k~--~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~ 497 (829)
|+.+.+.+ .+.|+- ...+|+..++ .+|||.||+|+++++.++++|+++
T Consensus 324 -----D~f~~~~l~~~e~lg~-----~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~------------------ 375 (399)
T PRK09052 324 -----EAFAAQSLAVIRDLGL-----DPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT------------------ 375 (399)
T ss_pred -----cHHHHHHHHHHHHhCC-----CCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc------------------
Confidence 66555443 445552 1246777777 569999999999999999999772
Q ss_pred CCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 498 NSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 498 ~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++.+++..+-||.-.++|||.
T Consensus 376 ------------------~~~~g~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 376 ------------------NLKYGMVTMCVGTGMGAAGIFER 398 (399)
T ss_pred ------------------CCCeEEEEEcccCCceeEEEEEe
Confidence 12468888888999999999984
No 132
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.89 E-value=4.2e-22 Score=222.00 Aligned_cols=264 Identities=16% Similarity=0.183 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHH-HcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396 203 QRLFLQNCWTCIE-DAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA 279 (829)
Q Consensus 203 ~~l~l~aa~~AL~-dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t 279 (829)
..|+.++.+++|+ ++|+++++|+ .+|+|...... .....++..++...||. -|+++
T Consensus 27 ~~L~~~a~~~al~r~a~i~~~~Id----~vi~G~~~~~~-----------------~~g~~~ar~~~l~~Gl~~~vp~~t 85 (400)
T PRK13359 27 DDLGAVPLKALVERNPDVDWAAID----DVIYGCANQAG-----------------EDNRNVARMSLLLAGLPHGVPGST 85 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC----EEEEEeccccc-----------------cccccHHHHHHHHcCCCCCCceEE
Confidence 3477889999999 5799999999 78887543110 00134667788888985 49999
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH-----HH-------H-------------H-c-CC----
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI-----KM-------S-------------K-S-GM---- 328 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~-----~~-------~-------------~-~-g~---- 328 (829)
|+.+|+||+.|+..|+++|++|++|++||||+|+|+...... .+ . . . +.
T Consensus 86 V~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 165 (400)
T PRK13359 86 INRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPE 165 (400)
T ss_pred EeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccccccccCCHHH
Confidence 999999999999999999999999999999999987532100 00 0 0 0 00
Q ss_pred ----------CC-------------------CCCCC-------------------------C------------CCCC--
Q psy11396 329 ----------LS-------------------PDGHC-------------------------Y------------SFDQ-- 340 (829)
Q Consensus 329 ----------ls-------------------~~~~~-------------------------~------------pfd~-- 340 (829)
++ +.+.. | .|+.
T Consensus 166 ~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~~l~p~f~~~g 245 (400)
T PRK13359 166 TAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALAKLKGVVRPDG 245 (400)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHhcCCCccCCCC
Confidence 00 00000 0 1221
Q ss_pred ---CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy11396 341 ---RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLE 417 (829)
Q Consensus 341 ---~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve 417 (829)
..+.+.++|||+++||++++.|+++|.+++++|.|++..... +.+...+...+++++|+++|++|+|||+||
T Consensus 246 ~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~A~~~al~~AGl~~~DID~ie 320 (400)
T PRK13359 246 TVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAGVE-----PRVMGIGPAPATQKLLARLGMTLDQFDVIE 320 (400)
T ss_pred ceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEecCC-----CCccchhHHHHHHHHHHHhCCCHHHcCcCc
Confidence 122356799999999999999999999999999999886421 223445668899999999999999999999
Q ss_pred ecCCCCCCCChHHHHHHH--HHhcccCCCCCccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCcc
Q psy11396 418 AHGTGTKLGDPIEFEALC--ESFNKFSYHKNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEH 493 (829)
Q Consensus 418 ~hgtgt~~gD~~E~~Al~--~~~~~~~~~~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~ 493 (829)
.| |..+.+.+. +.|+-. .+..||+..++. +|||.||+|+..++.++.+|+..
T Consensus 321 i~-------dafa~~~l~~~e~lg~~---~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~~-------------- 376 (400)
T PRK13359 321 LN-------EAFASQGLAVLRELGLA---DDDARVNPNGGAIALGHPLGASGARLVTTALYQLERT-------------- 376 (400)
T ss_pred cC-------cHhHHHHHHHHHHcCCC---CCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhhc--------------
Confidence 77 777665543 445421 123689999997 79999999999999999999761
Q ss_pred CCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 494 IKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 494 ~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++++++..+-||+-.++|||.
T Consensus 377 ----------------------~~~~g~~~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 377 ----------------------GGRFALCTMCIGVGQGIAIAIER 399 (400)
T ss_pred ----------------------CCCeEEEEEcccCCceeEEEEEe
Confidence 23568888888899999999985
No 133
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.89 E-value=1.2e-21 Score=218.56 Aligned_cols=264 Identities=18% Similarity=0.241 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+.+++++||+|+|+.+++++ .+++|+..++. .....++..++..+|+. -|.++|
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID----~vi~g~~~~~~-----------------~~g~~~a~~~~~~lGl~~~~p~~~V 86 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPID----DLIIGCAMPEA-----------------EQGLNMARNIGALAGLPYTVPAITI 86 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCC----EEEEEeccccc-----------------cccchHHHHHHHHcCCCCCcceeeh
Confidence 56889999999999998778888 78888543210 00122344688889997 499999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-----------------H---H------HHHHcCCCC----
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-----------------H---I------KMSKSGMLS---- 330 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-----------------~---~------~~~~~g~ls---- 330 (829)
+++|+||+.|+..|+++|++|.+|++||+|+|.++.... + + ...+.|...
T Consensus 87 ~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~tre~~a 166 (391)
T PRK07661 87 NRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQD 166 (391)
T ss_pred hhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHHHhCCCHHHHH
Confidence 999999999999999999999999999999998753210 0 0 000011000
Q ss_pred -------------CCC-CC---------------------------------------------CC-CC-----CCCCCc
Q psy11396 331 -------------PDG-HC---------------------------------------------YS-FD-----QRANGF 345 (829)
Q Consensus 331 -------------~~~-~~---------------------------------------------~p-fd-----~~~~G~ 345 (829)
+.. .. +| |. ...+..
T Consensus 167 ~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g~lt~~~~~ 246 (391)
T PRK07661 167 AFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGNSS 246 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCCCCEeccccC
Confidence 000 00 01 10 122345
Q ss_pred ccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy11396 346 VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKL 425 (829)
Q Consensus 346 ~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~ 425 (829)
.++|||+++||++++.|+++|.+++++|+|++...+... +...+...+++++|+++|++|+|||+||.|
T Consensus 247 ~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~did~~ei~------ 315 (391)
T PRK07661 247 QMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPPE-----VMGIGPIAAIPKALKLAGLELSDIGLFELN------ 315 (391)
T ss_pred CCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCCc-----ccchHHHHHHHHHHHHcCCCHHHCCEEEeC------
Confidence 689999999999999999999999999999998865322 123466889999999999999999999987
Q ss_pred CChHHHHHHHH--HhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeee
Q psy11396 426 GDPIEFEALCE--SFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFI 503 (829)
Q Consensus 426 gD~~E~~Al~~--~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v 503 (829)
|..+.+.+.. .|+- ...++++++.+..+|||.||+|+.+++.++++|+++
T Consensus 316 -d~f~~~~l~~~e~lg~---~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~------------------------ 367 (391)
T PRK07661 316 -EAFASQSIQVIRELGL---DEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR------------------------ 367 (391)
T ss_pred -CHHHHHHHHHHHHcCC---CCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc------------------------
Confidence 7777777763 4542 223566777777789999999999999999999761
Q ss_pred ccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 504 NTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 504 ~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++.+++..+-||.-.++|||.
T Consensus 368 ------------~~~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 368 ------------NEQFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred ------------CCCeEEEEEccccChhhEEEEEe
Confidence 12568888888899999999984
No 134
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.89 E-value=4.4e-22 Score=222.52 Aligned_cols=265 Identities=17% Similarity=0.202 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t 279 (829)
...|+.+|+++||+|||+++++|+ ++++|+...++. . ...+..++..+|+. .|++.
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID----~vv~g~~~~~~~-----------------~-~~~a~~va~~lGl~~~~~~~~ 78 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELID----DVIFGNVLQAGE-----------------Q-QNIARQAALLAGLPESVPAYT 78 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC-----------------C-ChHHHHHHHHcCCCCCceeee
Confidence 367999999999999999999998 788875432221 0 12345677888885 48999
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH-----------H-----H-HHcCCCCC-----------
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI-----------K-----M-SKSGMLSP----------- 331 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~-----------~-----~-~~~g~ls~----------- 331 (829)
|+++|+|++.||..|+++|++|.+|.+||+|+|.+....... . + ...+...+
T Consensus 79 v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~ 158 (386)
T TIGR01930 79 VNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAE 158 (386)
T ss_pred ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHH
Confidence 999999999999999999999999999999998753211000 0 0 00010000
Q ss_pred -----CC-----------------CC--C---------CC---------------------C-----------------C
Q psy11396 332 -----DG-----------------HC--Y---------SF---------------------D-----------------Q 340 (829)
Q Consensus 332 -----~~-----------------~~--~---------pf---------------------d-----------------~ 340 (829)
.+ .. + |. . .
T Consensus 159 ~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~ 238 (386)
T TIGR01930 159 NLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVT 238 (386)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCeee
Confidence 00 00 0 21 0 0
Q ss_pred CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396 341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG 420 (829)
Q Consensus 341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg 420 (829)
..+.+.++|||+++||++++.|++++.+++++|.|++...... .+...+..+++++||++||++|+|||++|.|.
T Consensus 239 ~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~~-----~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d 313 (386)
T TIGR01930 239 AGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVDP-----EIMGLGPVPAIPKALKKAGLSISDIDLFEINE 313 (386)
T ss_pred CCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCCC-----ccccccHHHHHHHHHHHcCCCHHHCCeeehcc
Confidence 1233456999999999999999999999999999998875421 22234557899999999999999999999997
Q ss_pred CCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCC
Q psy11396 421 TGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSP 500 (829)
Q Consensus 421 tgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~ 500 (829)
+.+. .|.. ..+.|+- ...++++++.+..+|||.||+|+.+++.+++||+..
T Consensus 314 ~fa~----~~~~-~~e~lG~---~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~--------------------- 364 (386)
T TIGR01930 314 AFAA----QVLA-CIKELGL---DLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR--------------------- 364 (386)
T ss_pred hhHH----HHHH-HHHHhCC---ChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc---------------------
Confidence 7752 2333 3345542 122456666667789999999999999999999873
Q ss_pred eeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 501 FFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 501 ~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
..++++++..+-||+..++|||
T Consensus 365 ---------------~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 365 ---------------GGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred ---------------CCCEEEEEEeccCCceEEEEeC
Confidence 2367899999999999999886
No 135
>KOG1684|consensus
Probab=99.89 E-value=3.2e-23 Score=214.05 Aligned_cols=233 Identities=18% Similarity=0.256 Sum_probs=189.5
Q ss_pred eccccchhhHHHHHHHHhhhcccCCcccccccccccchhhhcccccceeeeeeCC-CCeeeccCChhhhhhhhccccc--
Q psy11396 560 PLSAKNLSQLLIYAKLICNYISKDLKNSTVVKGITDAFSYINSSVQYKVIIITGY-ENYFACGGTKEGLLKIQKGISR-- 636 (829)
Q Consensus 560 ~~Sa~~~~~L~~~~~~~~~~l~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~-g~~F~~G~D~~~~~~~~~~~~~-- 636 (829)
++.-++|.+|+ ++|.+|+..+-..+...+.++.+++||+.|. +++||+|+|+............
T Consensus 50 ~itLNRPKaLN-------------AlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~d~~~~~ 116 (401)
T KOG1684|consen 50 VITLNRPKALN-------------ALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIKDKETPE 116 (401)
T ss_pred EEEecCchhhc-------------cccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhhcCCchH
Confidence 34556666664 5688899999999999999999999999999 7999999998865543222111
Q ss_pred ----cccccc-ccccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHH
Q psy11396 637 ----FTDEKS-YCMPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILS 711 (829)
Q Consensus 637 ----~~~~~~-~~~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a 711 (829)
|..... ...+-.+.||.||.++|..+|||++|.+.--|||++|++.|++||+.+|++|+.|++++|+|..| ...
T Consensus 117 ~~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrlpg-~lg 195 (401)
T KOG1684|consen 117 VKKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRLPG-YLG 195 (401)
T ss_pred HHHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhCcc-HHH
Confidence 111111 12222389999999999999999999999999999999999999999999999999999999988 799
Q ss_pred HHHHhcCCccCHHHHHHcCCcccccChhhHHHHHH---------------------------------------------
Q psy11396 712 REILFTASEFKGKELKERGISMPVLPRKQVLFYSL--------------------------------------------- 746 (829)
Q Consensus 712 ~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~--------------------------------------------- 746 (829)
.++.+||+++++.+|+..||.++.||.++|..--+
T Consensus 196 ~YLgLTG~rl~GaD~~~~GlATHyv~S~~l~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~~~Fs~ 275 (401)
T KOG1684|consen 196 LYLGLTGQRLSGADALRCGLATHYVPSEKLPSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVINKCFSA 275 (401)
T ss_pred HhhhhccceecchHHHHhcchhhccchhhhhHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHHHhhcc
Confidence 99999999999999999999999988655421111
Q ss_pred ------------------------HHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHH
Q psy11396 747 ------------------------KLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIER 802 (829)
Q Consensus 747 ------------------------~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~ 802 (829)
+.++.|-..+|.++..+-+++++.....+++.+.+|+..-.... .+.|+.|++++
T Consensus 276 ~tVeeIie~lk~~q~~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs~~tl~~~l~~Eyr~s~~~~-~~~DF~EGvRA 354 (401)
T KOG1684|consen 276 NTVEEIIEALKNYQQSADGSEWAKETLKTLKKMSPTSLKVTLRQIREGSKQTLDQCLTMEYRLSLRML-MRGDFCEGVRA 354 (401)
T ss_pred ccHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHh-hccchhhhhhh
Confidence 11222557789999999999998888899999999999998887 67799999999
Q ss_pred HH-hhc
Q psy11396 803 YF-DKS 807 (829)
Q Consensus 803 ~~-~k~ 807 (829)
.+ .|.
T Consensus 355 ~LIDKd 360 (401)
T KOG1684|consen 355 VLIDKD 360 (401)
T ss_pred eeecCC
Confidence 66 544
No 136
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.88 E-value=2.9e-21 Score=217.88 Aligned_cols=271 Identities=17% Similarity=0.208 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--cceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~tv 280 (829)
..|+.+|+++||+|+|+++++|+ +|++|+....+. .....+..++..+|+.. |.++|
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID----~vv~G~~~~~~~-----------------~~~~~~r~~a~~~Gl~~~~pa~~V 130 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVG----DIVVGTVLAPGS-----------------QRANECRMAAFYAGFPETVPVRTV 130 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCccc-----------------ccchHHHHHHHHCCCCCCcceEEE
Confidence 56899999999999999999999 788885533221 01122335667779864 88999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH---------------------------HHHHcCCC----
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI---------------------------KMSKSGML---- 329 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~---------------------------~~~~~g~l---- 329 (829)
+.+|+||+.|+..|+++|++|.+|++||+|+|.+....... ...+.|..
T Consensus 131 ~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~l 210 (452)
T PLN02287 131 NRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREEQ 210 (452)
T ss_pred eccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHHH
Confidence 99999999999999999999999999999999875422100 00000000
Q ss_pred -------------CCC-CCCC---------------------CCCCC---------------------------CCCccc
Q psy11396 330 -------------SPD-GHCY---------------------SFDQR---------------------------ANGFVP 347 (829)
Q Consensus 330 -------------s~~-~~~~---------------------pfd~~---------------------------~~G~~~ 347 (829)
.+. +..+ +++.+ .+...+
T Consensus 211 a~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~~ 290 (452)
T PLN02287 211 DQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQV 290 (452)
T ss_pred HHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCCc
Confidence 011 1110 11110 244678
Q ss_pred ccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy11396 348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD 427 (829)
Q Consensus 348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD 427 (829)
+|||+++||++++.|++++.+|++++.+++.... . ..+...+...++++||++||++|+|||++|.|..++..
T Consensus 291 sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~~--~---~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~~-- 363 (452)
T PLN02287 291 SDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGV--D---PAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQ-- 363 (452)
T ss_pred CCceEEEEEeeHHHHHHCCCCeEEEEEEEeeccC--C---CccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHHH--
Confidence 9999999999999999999999999999774321 1 12234456789999999999999999999999333221
Q ss_pred hHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccc
Q psy11396 428 PIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKC 507 (829)
Q Consensus 428 ~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~ 507 (829)
|...+. .|+ ....++++++.+..+|||.||||+.+++.++++|++.
T Consensus 364 --~l~~~e-~lG---~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~---------------------------- 409 (452)
T PLN02287 364 --FVYCCK-KLG---LDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR---------------------------- 409 (452)
T ss_pred --HHHHHH-HcC---CCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhc----------------------------
Confidence 222222 233 1233566777777789999999999999999999761
Q ss_pred ccccccccCccEEEEeccCCCCceEEEEeeeccc
Q psy11396 508 KSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541 (829)
Q Consensus 508 ~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~ 541 (829)
.+.-++++++...-||.-.++|||....
T Consensus 410 ------~~~~~~gl~~~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 410 ------GKDCRFGVVSMCIGTGMGAAAVFERGDS 437 (452)
T ss_pred ------CCCCCeeEEEEccccCceeEEEEEecCc
Confidence 0002568888888899999999998754
No 137
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=99.88 E-value=1.2e-21 Score=218.50 Aligned_cols=264 Identities=15% Similarity=0.199 Sum_probs=194.2
Q ss_pred HHHHHHHHHHHHH-HcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396 203 QRLFLQNCWTCIE-DAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA 279 (829)
Q Consensus 203 ~~l~l~aa~~AL~-dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t 279 (829)
..|+.++.+++|+ |+|+++++|+ .+++|..... +.....++..++..+|+. -|+++
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id----~v~~G~~~~~-----------------~~~~~~~ar~~~~~~Gl~~~~p~~~ 84 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAID----DVIYGCANQA-----------------GEDNRNVARMAALLAGLPVSVPGTT 84 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC----EEEEEecccc-----------------ccccccHHHHHHHHcCCCCCCceEE
Confidence 4588999999999 6899999998 7888744211 011123555688899996 49999
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH-------H---------------------H-HH------
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH-------I---------------------K-MS------ 324 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~-------~---------------------~-~~------ 324 (829)
|+++|+||+.|+..|+++|++|++|++||||+|+++..... . . +.
T Consensus 85 V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M~~ 164 (400)
T TIGR02430 85 VNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPE 164 (400)
T ss_pred eechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccccccccCcHHH
Confidence 99999999999999999999999999999999988653210 0 0 00
Q ss_pred -------HcCC-------------------------------------------CCCCCCCC-------------CCC--
Q psy11396 325 -------KSGM-------------------------------------------LSPDGHCY-------------SFD-- 339 (829)
Q Consensus 325 -------~~g~-------------------------------------------ls~~~~~~-------------pfd-- 339 (829)
+.|. +.++...| .|+
T Consensus 165 ~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l~~~~~v~~p~ 244 (400)
T TIGR02430 165 TAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLKPVVRPD 244 (400)
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHHhcCCCcccCC
Confidence 0000 00000000 011
Q ss_pred ---CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEE
Q psy11396 340 ---QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLL 416 (829)
Q Consensus 340 ---~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~v 416 (829)
...+.+.++|||+++||++++.|+++|.+++++|+|++....... +...+...++++||+++|++|+||||+
T Consensus 245 g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~DID~~ 319 (400)
T TIGR02430 245 GTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGVEPR-----IMGIGPVPATQKLLARAGLSIDQFDVI 319 (400)
T ss_pred CCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCCCc-----cccchHHHHHHHHHHHhCCCHHHCCCc
Confidence 012335679999999999999999999999999999988753221 233456789999999999999999999
Q ss_pred EecCCCCCCCChHHHHH--HHHHhcccCCCCCccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCc
Q psy11396 417 EAHGTGTKLGDPIEFEA--LCESFNKFSYHKNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNE 492 (829)
Q Consensus 417 e~hgtgt~~gD~~E~~A--l~~~~~~~~~~~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~ 492 (829)
|.| |..+.+. ..+.|+-. ....||+..++. +|||.||+|+.+++.++.+|+..
T Consensus 320 ei~-------D~f~~~~l~~~e~lG~~---~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~~------------- 376 (400)
T TIGR02430 320 ELN-------EAFAAQALAVLRELGLA---DDDARVNPNGGAIALGHPLGASGARLVLTALRQLERS------------- 376 (400)
T ss_pred ccC-------cHHHHHHHHHHHHcCCC---CCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHhc-------------
Confidence 977 6655444 44556521 122689999986 79999999999999999999761
Q ss_pred cCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 493 HIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 493 ~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++.+++...-||.-.++|||.
T Consensus 377 -----------------------~~~~g~~~~c~~gG~g~a~~~e~ 399 (400)
T TIGR02430 377 -----------------------GGRYALCTMCIGVGQGIALAIER 399 (400)
T ss_pred -----------------------CCCEEEEEEccccChhhEEEEEe
Confidence 13467888888889999999985
No 138
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.88 E-value=4.6e-21 Score=214.56 Aligned_cols=263 Identities=17% Similarity=0.226 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+.+++++||+|||+++++++ +|++|.....+ . ....+..++..+|+. -|.++|
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID----~vv~g~~~~~~---------------~---~~~~~~~~~~~~Gl~~~~p~~~v 83 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQ----EVFFGNVLSAN---------------L---GQAPARQAALGAGLPPSTICTTV 83 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCcCC---------------c---CCcHHHHHHHhcCCCCCCceEEE
Confidence 56899999999999999999999 78887432111 0 011334577888885 378899
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH---------------H-----------------H------H
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI---------------H-----------------I------K 322 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---------------~-----------------~------~ 322 (829)
+.+|+|++.|+.+|+++|++|++|++||+|+|.++.... . . .
T Consensus 84 ~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 163 (394)
T PLN02644 84 NKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELC 163 (394)
T ss_pred eccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHHHHH
Confidence 999999999999999999999999999999997742110 0 0 0
Q ss_pred HHHcCCCC-----------------CC-CCCC--------------C---CC---------------------------C
Q psy11396 323 MSKSGMLS-----------------PD-GHCY--------------S---FD---------------------------Q 340 (829)
Q Consensus 323 ~~~~g~ls-----------------~~-~~~~--------------p---fd---------------------------~ 340 (829)
+.+.|... +. +..+ | ++ .
T Consensus 164 ~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g~vt 243 (394)
T PLN02644 164 ADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGGSVT 243 (394)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCCcEe
Confidence 00000000 00 0100 0 10 0
Q ss_pred CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396 341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG 420 (829)
Q Consensus 341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg 420 (829)
..+...++||++++||++++.|++++.+++++|+|++...+..... ......+++++|+++|++|+|||++|+|
T Consensus 244 ~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~~-----~~~~~~a~~~al~~Agi~~~Did~~Ei~- 317 (394)
T PLN02644 244 AGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPELF-----TTAPALAIPKALKHAGLEASQVDYYEIN- 317 (394)
T ss_pred ccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCccc-----chhHHHHHHHHHHHcCCCHHHCCEEEeC-
Confidence 0235667999999999999999999999999999999876542111 1223469999999999999999999998
Q ss_pred CCCCCCChHHHHHH--HHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCC
Q psy11396 421 TGTKLGDPIEFEAL--CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLEN 498 (829)
Q Consensus 421 tgt~~gD~~E~~Al--~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~ 498 (829)
|..+.+.+ .+.|+- ...+++++..+..+|||.||+|+.++++++++|+..
T Consensus 318 ------d~f~~~~l~~~e~lg~---~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~------------------- 369 (394)
T PLN02644 318 ------EAFSVVALANQKLLGL---DPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK------------------- 369 (394)
T ss_pred ------cHHHHHHHHHHHHhCC---CccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc-------------------
Confidence 55544433 344542 123456666666779999999999999999999762
Q ss_pred CCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 499 SPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 499 ~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++.+++.++-||...++|||.
T Consensus 370 -----------------~~~~g~~~~~~~gg~g~a~~~e~ 392 (394)
T PLN02644 370 -----------------NGKYGVAGICNGGGGASAIVVEL 392 (394)
T ss_pred -----------------CCCeEEEEEeccCCceeEEEEEe
Confidence 12467777788889999999985
No 139
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.88 E-value=4e-21 Score=215.42 Aligned_cols=284 Identities=16% Similarity=0.208 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceeec
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAID 281 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv~ 281 (829)
..|+.+|+++||+|||+++++++ ++++|+...++.. . .... +..+...++++ .|.++|+
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId----~vi~g~~~~~~~~---~-----------~~~~--~~~~~~~~gl~~~p~~~v~ 82 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVD----GIFLGHFNAGFSP---Q-----------DFPA--SLVLQADPALRFKPATRVE 82 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEEecCCccc---c-----------ccch--hHHHHHhcCCCCCceeeec
Confidence 56899999999999999999998 8888865333210 0 0000 11122344664 4889999
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH--------HHHH------cCC----------------CC-
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI--------KMSK------SGM----------------LS- 330 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~--------~~~~------~g~----------------ls- 330 (829)
++|+|++.||..|+++|++|++|++||+|+|.+....... .+.. .+. ++
T Consensus 83 ~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~ 162 (389)
T PRK07516 83 NACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQS 162 (389)
T ss_pred cccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCH
Confidence 9999999999999999999999999999999865321100 0000 000 00
Q ss_pred -----------------CCCC-CCCCCC------------------CCCCcccccceEEEEEccchhhhhCCCceEEEEE
Q psy11396 331 -----------------PDGH-CYSFDQ------------------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIK 374 (829)
Q Consensus 331 -----------------~~~~-~~pfd~------------------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~ 374 (829)
|... .+|++. ..+.+.++|||+++||.+++.|++.+. +++|+
T Consensus 163 e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~~~--~v~i~ 240 (389)
T PRK07516 163 DALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARALQR--AVRFR 240 (389)
T ss_pred HHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhcCC--CEEEE
Confidence 1000 011111 134467899999999999999988753 56899
Q ss_pred EeeeecCCCCCCCCCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHH--------HHh-cccCCC
Q psy11396 375 GWGVNQDGKTNGITAP-NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALC--------ESF-NKFSYH 444 (829)
Q Consensus 375 g~~~~~dg~~~~~~~p-~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~--------~~~-~~~~~~ 444 (829)
|++...+........| ...+...++++||+++|++|+|||++|.|+++|.. .....+++. +.+ .+....
T Consensus 241 g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~-~~~~~e~lg~~~~G~~~~~~~~g~~~~ 319 (389)
T PRK07516 241 ARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA-ELIEYEAMGLAPPGQGARAIREGWTAK 319 (389)
T ss_pred EEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH-HHHHHHHcCCCCCCchHHHHHCCCccC
Confidence 9998877544322222 34667789999999999999999999999999975 222233321 011 111222
Q ss_pred CCccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEE
Q psy11396 445 KNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAI 522 (829)
Q Consensus 445 ~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v 522 (829)
.+.+||+...+. +|||.||+|+.+++.+++||+...=..+ -...+++++
T Consensus 320 ~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~ag~rQ-----------------------------v~~a~~~l~ 370 (389)
T PRK07516 320 DGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEAGGMQ-----------------------------IPGAKLAGV 370 (389)
T ss_pred CCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCccCCc-----------------------------CCchheeee
Confidence 345677665554 5999999999999999999998421110 113567899
Q ss_pred eccC-CCCceEEEEeee
Q psy11396 523 NSFG-FSGTNAHIVLME 538 (829)
Q Consensus 523 ~s~G-~gG~na~~vl~e 538 (829)
.+.| .+.+++.+||+.
T Consensus 371 ~~~gg~~~~~~~~vl~~ 387 (389)
T PRK07516 371 FNMGGAAVANYVSILER 387 (389)
T ss_pred eccCcccceEEEEEEEe
Confidence 9887 555566666653
No 140
>PRK05790 putative acyltransferase; Provisional
Probab=99.88 E-value=1.8e-21 Score=218.57 Aligned_cols=263 Identities=17% Similarity=0.206 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+.+|+++||+|||+++++|+ ++++|+..... .....+..+...+|+. .|.++|
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID----~vi~g~~~~~~------------------~~~~~~~~~~~~~gl~~~~~~~~v 84 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVD----EVIMGQVLQAG------------------AGQNPARQAALKAGLPVEVPALTI 84 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----eEEEEEecCCC------------------CCCcHHHHHHHHcCCCCCCceeee
Confidence 56899999999999999999999 78887543210 0011222345556774 489999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH---------------H-HHH--H-HcCCC------------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI---------------H-IKM--S-KSGML------------ 329 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---------------~-~~~--~-~~g~l------------ 329 (829)
+.+|+|++.||..|+++|++|.+|++||+|+|.++.... . ..+ . ..+..
T Consensus 85 ~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y 164 (393)
T PRK05790 85 NKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENL 164 (393)
T ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHH
Confidence 999999999999999999999999999999997632110 0 000 0 00000
Q ss_pred ------C-------------------CCCCC----CC----------------------------------CCC-----C
Q psy11396 330 ------S-------------------PDGHC----YS----------------------------------FDQ-----R 341 (829)
Q Consensus 330 ------s-------------------~~~~~----~p----------------------------------fd~-----~ 341 (829)
+ ..+.. .| |+. .
T Consensus 165 ~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~ 244 (393)
T PRK05790 165 AEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTA 244 (393)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeC
Confidence 0 00000 01 110 0
Q ss_pred CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396 342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421 (829)
Q Consensus 342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt 421 (829)
.+.+.++|||+++||++++.|++.+.+++++|.|++....... +...+...++++||+++|++|+|||++|+|
T Consensus 245 ~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~a~~~Agi~~~did~~e~~-- 317 (393)
T PRK05790 245 GNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVDPA-----IMGIGPVPAIRKALEKAGWSLADLDLIEIN-- 317 (393)
T ss_pred CcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCC-----ccchhHHHHHHHHHHHcCCCHHHCCEEEeC--
Confidence 1446789999999999999999999999999999988753221 122345689999999999999999999998
Q ss_pred CCCCCChHHHHH--HHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396 422 GTKLGDPIEFEA--LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS 499 (829)
Q Consensus 422 gt~~gD~~E~~A--l~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~ 499 (829)
|..+... ..+.|+- ...++++++.+...||+.||+|+.+++.++++|+..
T Consensus 318 -----d~f~~~~l~~~e~lg~---~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~-------------------- 369 (393)
T PRK05790 318 -----EAFAAQALAVEKELGL---DPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR-------------------- 369 (393)
T ss_pred -----cHHHHHHHHHHHHhCC---ChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc--------------------
Confidence 5555443 2334442 123566777777789999999999999999999872
Q ss_pred CeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++++++..|=||..+++|||.
T Consensus 370 ----------------~~~~gl~~~~~~~g~g~~~~~e~ 392 (393)
T PRK05790 370 ----------------GAKKGLATLCIGGGQGVALIVER 392 (393)
T ss_pred ----------------CCCeEEEEEeccCCceeEEEEEc
Confidence 12678999999999999999985
No 141
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.88 E-value=2.2e-21 Score=216.57 Aligned_cols=242 Identities=15% Similarity=0.200 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+.+++++||+|+|+++++++ .+++|+...+.. ....++..++...|+. -|.++|
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id----~v~~G~~~~~~~-----------------~~~~~ar~~~~~~Glp~~~p~~tV 85 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIE----DVILGCTNQAGE-----------------DSRNVARNALLLAGLPVTVPGQTV 85 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc-----------------ccccHHHHHHHhcCCCCCCceeee
Confidence 56889999999999999999999 788885432110 0112344577778885 589999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH------------HHHHH--------------cCC------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH------------IKMSK--------------SGM------ 328 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~------------~~~~~--------------~g~------ 328 (829)
+++|+||+.|+..|+++|++|++|++||||+|+++..... ..+.. ...
T Consensus 86 ~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~mg~~ 165 (401)
T PRK08131 86 NRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPET 165 (401)
T ss_pred echhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccccccCCHHHH
Confidence 9999999999999999999999999999999987643210 00000 000
Q ss_pred ---------CC-------------------CCCCC----CCC-------------CC-----------------------
Q psy11396 329 ---------LS-------------------PDGHC----YSF-------------DQ----------------------- 340 (829)
Q Consensus 329 ---------ls-------------------~~~~~----~pf-------------d~----------------------- 340 (829)
++ +.+.. .|. +.
T Consensus 166 ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~~l~p~f~~g 245 (401)
T PRK08131 166 GDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKLKPLFEGG 245 (401)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHhcCCCCCCCC
Confidence 00 00000 011 10
Q ss_pred ---CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy11396 341 ---RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLE 417 (829)
Q Consensus 341 ---~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve 417 (829)
..+.+.++|||+++||.+++.|++.+.+++++|.|++...+... ....+...+++++|+++|++|+|||++|
T Consensus 246 ~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~a~~~agl~~~did~~e 320 (401)
T PRK08131 246 VVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEPR-----IMGIGPVEAIKKALARAGLTLDDMDIIE 320 (401)
T ss_pred CccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCCc-----cccchHHHHHHHHHHHcCCCHHHCCeeh
Confidence 01556789999999999999999999999999999998865322 1123567899999999999999999999
Q ss_pred ecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccC--cCcchhhhhHHHHHHHHHHHhc
Q psy11396 418 AHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKH 478 (829)
Q Consensus 418 ~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~ 478 (829)
.|.+++.. |...+ +.++- .....||+..++. +|||.||+|+.+++.++++|+.
T Consensus 321 i~d~Fa~~----~l~~~-e~lg~---~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~ 375 (401)
T PRK08131 321 INEAFASQ----VLGCL-KGLGV---DFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQR 375 (401)
T ss_pred hccHHHHH----HHHHH-HHcCC---CCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHh
Confidence 99554432 22222 23331 1123678888885 5999999999999999999976
No 142
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.88 E-value=2.8e-21 Score=215.72 Aligned_cols=263 Identities=16% Similarity=0.200 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHH-HcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396 203 QRLFLQNCWTCIE-DAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA 279 (829)
Q Consensus 203 ~~l~l~aa~~AL~-dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t 279 (829)
..|+.++.+++|+ |+|+++++++ .|++|+..... .....++..++...|+. -|+++
T Consensus 27 ~~L~~~a~~~al~~~agi~~~~Id----~v~~G~~~~~~-----------------~~~~~~ar~~~~~~Gl~~~vP~~t 85 (401)
T PRK09050 27 DDLGAVPLKALMARNPGVDWEAVD----DVIYGCANQAG-----------------EDNRNVARMSALLAGLPVSVPGTT 85 (401)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC----EEEEEeccccc-----------------cccchHHHHHHHHcCCCCCCceEE
Confidence 4588999999999 6899999998 78888542111 11123455688889993 59999
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH-----HH------------------------HH------
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH-----IK------------------------MS------ 324 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~-----~~------------------------~~------ 324 (829)
|+++|+||+.|+..|+++|++|++|++||||+|+++..... .. +.
T Consensus 86 V~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~ 165 (401)
T PRK09050 86 INRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGVDSMPE 165 (401)
T ss_pred EecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccccccccccHHH
Confidence 99999999999999999999999999999999988643210 00 00
Q ss_pred -------HcCCCC---------------------C-----------------------CCCCC------------C-CCC
Q psy11396 325 -------KSGMLS---------------------P-----------------------DGHCY------------S-FDQ 340 (829)
Q Consensus 325 -------~~g~ls---------------------~-----------------------~~~~~------------p-fd~ 340 (829)
+.| ++ + +...| | |+.
T Consensus 166 ~ae~~a~~~g-isre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l~~l~~~~~~ 244 (401)
T PRK09050 166 TAENVAEDYN-ISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEALAKLKPVFRP 244 (401)
T ss_pred HHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCCcccC
Confidence 000 00 0 11111 1 111
Q ss_pred -----CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccE
Q psy11396 341 -----RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQL 415 (829)
Q Consensus 341 -----~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ 415 (829)
..+.+.++|||+++||++++.|+++|.+++++|+|++....... ....+...+++++|++||++|+|||+
T Consensus 245 ~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~DId~ 319 (401)
T PRK09050 245 DGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEPR-----IMGIGPAPATRKLLARLGLTIDQFDV 319 (401)
T ss_pred CCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCCc-----cccchHHHHHHHHHHHcCCCHHHCCc
Confidence 12335679999999999999999999999999999988754322 12234578999999999999999999
Q ss_pred EEecCCCCCCCChHHHHHHH--HHhcccCCCCCccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCC
Q psy11396 416 LEAHGTGTKLGDPIEFEALC--ESFNKFSYHKNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILN 491 (829)
Q Consensus 416 ve~hgtgt~~gD~~E~~Al~--~~~~~~~~~~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~ 491 (829)
+|.| |..+.+.+. +.|+- .....||+..++. +|||.||+|+..++.++.+|+.+
T Consensus 320 ~ei~-------D~f~~~~l~~~e~lg~---~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~------------ 377 (401)
T PRK09050 320 IELN-------EAFAAQGLAVLRQLGL---ADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERT------------ 377 (401)
T ss_pred cccC-------cHhHHHHHHHHHHcCC---CCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhc------------
Confidence 9987 666665543 34441 1123689999997 69999999999999999999761
Q ss_pred ccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 492 EHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 492 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++++++..+-||.-.++|||.
T Consensus 378 ------------------------~~~~g~~~~c~~gG~g~a~~~e~ 400 (401)
T PRK09050 378 ------------------------GGRYALCTMCIGVGQGIALAIER 400 (401)
T ss_pred ------------------------CCCeEEEEEcccccceeEEEEEe
Confidence 23568888888999999999985
No 143
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.88 E-value=3e-21 Score=216.10 Aligned_cols=265 Identities=17% Similarity=0.230 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~tv 280 (829)
..|+.+++++||+|||+++++|+ .|++|+...++. ...++...+..+|+ +.|+++|
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID----~vi~G~~~~~~~------------------~~~~~~~~~l~ag~~~~~p~~~V 89 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQID----EVVMGCVLPAGQ------------------GQAPARQAALGAGLPLSVGCTTV 89 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEEecCCCcc------------------chHHHHHHHHcCCCCCCccEeec
Confidence 56899999999999999999999 788885432211 11123334444565 3588999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------------HHHH--HHc-CCC------------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------------HIKM--SKS-GML------------ 329 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------------~~~~--~~~-g~l------------ 329 (829)
+.+|+||+.|+..|+++|++|++|++||+|+|.++.... ...+ ... ..+
T Consensus 90 ~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 169 (397)
T PRK06954 90 NKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAEE 169 (397)
T ss_pred cccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHHHHHH
Confidence 999999999999999999999999999999998763110 0000 000 000
Q ss_pred -------C-------------------CCCCC----CCCCC-------------------------------------CC
Q psy11396 330 -------S-------------------PDGHC----YSFDQ-------------------------------------RA 342 (829)
Q Consensus 330 -------s-------------------~~~~~----~pfd~-------------------------------------~~ 342 (829)
+ +.+.. .|+.. ..
T Consensus 170 ~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~f~~~g~lt~~ 249 (397)
T PRK06954 170 CAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPAFSKTGTVTAA 249 (397)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCccCCCCcEEcc
Confidence 0 01100 11110 01
Q ss_pred CCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396 343 NGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG 422 (829)
Q Consensus 343 ~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg 422 (829)
+.+.++|||+++||++++.|++.|.+++++|.|++........ ...+...++++||+++|++|+|||++|.|.++
T Consensus 250 ~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~Did~~ei~d~f 324 (397)
T PRK06954 250 NSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPSK-----FTTAPVGAIRKLFEKNGWRAAEVDLFEINEAF 324 (397)
T ss_pred ccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCccc-----ccchHHHHHHHHHHHcCCCHHHCCEEehhhHH
Confidence 2356799999999999999999999999999998765332211 11245789999999999999999999999555
Q ss_pred CCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396 423 TKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF 502 (829)
Q Consensus 423 t~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~ 502 (829)
+. .|..++... + ....++++++.+..+|||.||+|+.+++.++++|+..
T Consensus 325 a~----~~l~~~e~l-g---~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~----------------------- 373 (397)
T PRK06954 325 AV----VTMAAMKEH-G---LPHEKVNVNGGACALGHPIGASGARILVTLIGALRAR----------------------- 373 (397)
T ss_pred HH----HHHHHHHHh-C---CCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhc-----------------------
Confidence 53 244444433 2 1234577778888889999999999999999999761
Q ss_pred eccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 503 INTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 503 v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++.+++..+-||.-+++|||.
T Consensus 374 -------------~g~~~v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 374 -------------GGKRGVASLCIGGGEATAMGIEL 396 (397)
T ss_pred -------------CCCeEEEEEccccchhhEEEEEe
Confidence 12457788888889999999984
No 144
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.87 E-value=4.3e-21 Score=215.27 Aligned_cols=267 Identities=15% Similarity=0.173 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHHc-CCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396 203 QRLFLQNCWTCIEDA-GYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dA-Gl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv 280 (829)
..|+.+++++||+|+ |+++++|+ ++++|...... . .....+..++..+|+.+ |+++|
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID----~vv~g~~~~~~--------------~---~g~~~~~~~a~~lGl~~~p~~~v 86 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDID----DLMLGCGLPGG--------------E---QGFNMARVVAVLLGYDFLPGTTV 86 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC----EEEEEcccccc--------------c---ccCCHHHHHHHHcCCCCCCeeee
Confidence 568899999999997 99999999 78887432110 0 01124567889999975 88999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-------------HH---------------HHHH-c-----
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-------------HI---------------KMSK-S----- 326 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-------------~~---------------~~~~-~----- 326 (829)
+.+|+||+.|+..|+++|++|.+|++||+|+|.+..... .. .+.. .
T Consensus 87 ~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 166 (406)
T PRK07851 87 NRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGLL 166 (406)
T ss_pred eccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhccccccccccccccccccccccccc
Confidence 999999999999999999999999999999997532110 00 0000 0
Q ss_pred -----CC------------CC-------------------CCC--C-------------------CC-CCCC--------
Q psy11396 327 -----GM------------LS-------------------PDG--H-------------------CY-SFDQ-------- 340 (829)
Q Consensus 327 -----g~------------ls-------------------~~~--~-------------------~~-pfd~-------- 340 (829)
.+ ++ ..+ . .+ +++.
T Consensus 167 ~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~t~e~v~~s~~ 246 (406)
T PRK07851 167 PDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGTTYEKVSQLKP 246 (406)
T ss_pred ccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCcCHHHHhcCCC
Confidence 00 00 000 0 00 0110
Q ss_pred ---------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q psy11396 341 ---------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPN 411 (829)
Q Consensus 341 ---------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~ 411 (829)
..+.+.++|||+++||++++.|++.+.+++++|+|++...+.. .+...+...++++||++||++|+
T Consensus 247 v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agi~~~ 321 (406)
T PRK07851 247 VFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSP-----EIMGLGPVEASKQALARAGMSID 321 (406)
T ss_pred ccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCC-----CccchhHHHHHHHHHHHhCCCHH
Confidence 1134557999999999999999999999999999998865422 12233567899999999999999
Q ss_pred CccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCC
Q psy11396 412 DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILN 491 (829)
Q Consensus 412 dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~ 491 (829)
|||++|.|.+.+.. |...++ .|+- ...++++++.+..+|||.||+|+.+++.++++|+++
T Consensus 322 did~~ei~d~f~~~----~l~~le-~lg~---~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~------------ 381 (406)
T PRK07851 322 DIDLVEINEAFAAQ----VLPSAR-ELGI---DEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH------------ 381 (406)
T ss_pred HCCeehhhhHHHHH----HHHHHH-HhCC---CccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc------------
Confidence 99999998443321 222222 3331 123566777777789999999999999999999761
Q ss_pred ccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 492 EHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 492 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
..++.+++..+-||+-.++|||..
T Consensus 382 ------------------------~~~~g~~~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 382 ------------------------DKTFGLETMCVGGGQGMAMVLERL 405 (406)
T ss_pred ------------------------CCCeEEEEEccccChhhEEEEEec
Confidence 124688899999999999999964
No 145
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.87 E-value=1.1e-20 Score=212.24 Aligned_cols=266 Identities=17% Similarity=0.246 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+.+|+++||+|+|+++++++ .+++|+..+.+. ...++..++..+|+. -|.++|
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID----~vv~g~~~~~~~------------------~~~~a~~va~~~Gl~~~~p~~~V 84 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARID----DVIFGQGYPNGE------------------APAIGRVAALDAGLPVTVPGMQL 84 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC------------------CChHHHHHHHHcCCCCCCceeeh
Confidence 56889999999999999999999 888886543321 122345678888986 489999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH----------------HHHHH------------H-HcCC---
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD----------------IHIKM------------S-KSGM--- 328 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~----------------~~~~~------------~-~~g~--- 328 (829)
+.+|+||+.|+..|+++|++|.+|++||+|+|.++... .+..+ . ..++
T Consensus 85 ~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~ 164 (404)
T PRK06205 85 DRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIET 164 (404)
T ss_pred hhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCCCHHHH
Confidence 99999999999999999999999999999999765311 00000 0 0000
Q ss_pred ---------CC--------------------------------------------CCCC------------CCC-C---C
Q psy11396 329 ---------LS--------------------------------------------PDGH------------CYS-F---D 339 (829)
Q Consensus 329 ---------ls--------------------------------------------~~~~------------~~p-f---d 339 (829)
++ ++.. .+| | +
T Consensus 165 a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~~~~ 244 (404)
T PRK06205 165 AENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLAKLRPIMGKQD 244 (404)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHhcCCCcCccCC
Confidence 00 0000 001 1 0
Q ss_pred -----CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy11396 340 -----QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQ 414 (829)
Q Consensus 340 -----~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId 414 (829)
...+...++|||+++||++++.|++.+.+++++|.|++...+.... ...+...++++||++||++|+|||
T Consensus 245 p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~Agl~~~Did 319 (404)
T PRK06205 245 PEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPSR-----MGIGPVPATEKALARAGLTLDDID 319 (404)
T ss_pred CCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCcc-----ccccHHHHHHHHHHHcCCCHHHCC
Confidence 1123345689999999999999999999999999999987553321 113557899999999999999999
Q ss_pred EEEecCCCCCCCChHHHHHHH--HHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCc
Q psy11396 415 LLEAHGTGTKLGDPIEFEALC--ESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNE 492 (829)
Q Consensus 415 ~ve~hgtgt~~gD~~E~~Al~--~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~ 492 (829)
++|.| |....+.+. +.|+-......+++++..+..+|||.||+|+..++.++.+|+..
T Consensus 320 ~~ei~-------d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~------------- 379 (404)
T PRK06205 320 LIELN-------EAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR------------- 379 (404)
T ss_pred Eeeec-------cHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc-------------
Confidence 99998 444443332 23331110012456666666679999999999999999999762
Q ss_pred cCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 493 HIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 493 ~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++++++..+-||.-.++|||.
T Consensus 380 -----------------------~~~~gl~~~c~~gg~g~a~~~e~ 402 (404)
T PRK06205 380 -----------------------QARYGLETMCIGGGQGLAAVFER 402 (404)
T ss_pred -----------------------CCCeEEEEEeccCChhhEEEEEe
Confidence 13578999999999999999985
No 146
>PRK08256 lipid-transfer protein; Provisional
Probab=99.87 E-value=4.7e-21 Score=214.97 Aligned_cols=278 Identities=16% Similarity=0.182 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv 280 (829)
...|+.+++++||+|||+++++++...+|++.+... ....+...+|+++ |+++|
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~-------------------------~~~~~~~~lGl~~~~~~~v 76 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST-------------------------SGQRALYEVGMTGIPIVNV 76 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc-------------------------hhHHHHHHcCCCCCCCccc
Confidence 467999999999999999999998444443332110 0112456789988 99999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------HHHHH-------H-cCCCC------------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------HIKMS-------K-SGMLS------------ 330 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------~~~~~-------~-~g~ls------------ 330 (829)
+++|+|++.||..|+++|++|++|++||+|+|.+..... ...+. . .+...
T Consensus 77 ~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y 156 (391)
T PRK08256 77 NNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREH 156 (391)
T ss_pred ccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999998642100 00000 0 00100
Q ss_pred -------------------CCCCCCCCC---------------------CCCCCcccccceEEEEEccchhhhhCCCceE
Q psy11396 331 -------------------PDGHCYSFD---------------------QRANGFVPGEGVGVLMLKKLKDAKKDGDDIY 370 (829)
Q Consensus 331 -------------------~~~~~~pfd---------------------~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~ 370 (829)
......|.. ...+...++|||+++||.+++.|++.+.+++
T Consensus 157 ~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~ 236 (391)
T PRK08256 157 MEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRA 236 (391)
T ss_pred HHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCC
Confidence 000001110 0123356799999999999999998876788
Q ss_pred EEEEEeeeecCCCCCCCC-C---C-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH-h------
Q psy11396 371 CIIKGWGVNQDGKTNGIT-A---P-NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES-F------ 438 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~-~---p-~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~-~------ 438 (829)
++|.|++...+....... . . .......+.+++|+++|++++|||++|+|.+++.. |...++.. |
T Consensus 237 v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~~----~l~~le~lg~~~~Ge~ 312 (391)
T PRK08256 237 VEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSAN----ELLTYEALGLCPEGEA 312 (391)
T ss_pred EEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcHH----HHHHHHHcCCCCCCch
Confidence 999998877664322111 0 1 12345679999999999999999999999998754 44444332 1
Q ss_pred -----cccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccccccc
Q psy11396 439 -----NKFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWD 511 (829)
Q Consensus 439 -----~~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 511 (829)
.+.....+.+||+...+.+ |||.||+|+.+++.+++||+..--..+
T Consensus 313 ~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag~~Q--------------------------- 365 (391)
T PRK08256 313 EKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTAGARQ--------------------------- 365 (391)
T ss_pred HHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCcCCCc---------------------------
Confidence 1122233567888888776 999999999999999999987421110
Q ss_pred ccccCccEEEEeccCCCCceEEEEee
Q psy11396 512 IKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 512 ~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
-...+++++++.|.|.++...||+
T Consensus 366 --v~~~~~~l~~~~G~~~~~~~~v~~ 389 (391)
T PRK08256 366 --VEGARLALQHNLGLGGACVVTLYQ 389 (391)
T ss_pred --CCccceEEEeccccceeEEEEEEe
Confidence 013468999999955555555554
No 147
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.87 E-value=4.2e-21 Score=215.11 Aligned_cols=268 Identities=20% Similarity=0.207 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceeecc
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAIDT 282 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~~ 282 (829)
..|+.+++++||+|+|+++++++ .+++|+...++.. . .... ....+...++.+-|+++|++
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID----~vi~g~~~~~~~~-------------~-~~~~-~~~~l~a~~~~~~p~~~V~~ 93 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEID----DIITGCALQVGEN-------------W-LYGG-RHPIFLARLPYNIPAMAVDR 93 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----eeEEEeecCCCcc-------------c-ccHH-HHHHHHcCCCCCCcchhhhh
Confidence 45889999999999999999999 7788765432210 0 0000 01122333344569999999
Q ss_pred chhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH-----------HHH---H---HHH-cCC-C-------------C
Q psy11396 283 ACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD-----------IHI---K---MSK-SGM-L-------------S 330 (829)
Q Consensus 283 acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~-----------~~~---~---~~~-~g~-l-------------s 330 (829)
+|+||+.|+..|+++|++|.+|++||+|+|.++... ... . +.. .+. + +
T Consensus 94 ~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygit 173 (394)
T PRK06445 94 QCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIK 173 (394)
T ss_pred hhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999765211 000 0 000 000 0 0
Q ss_pred -------------------CCCC------------------CCCCCC------------------------CCCCccccc
Q psy11396 331 -------------------PDGH------------------CYSFDQ------------------------RANGFVPGE 349 (829)
Q Consensus 331 -------------------~~~~------------------~~pfd~------------------------~~~G~~~gE 349 (829)
+++. ..|... ..+.+.++|
T Consensus 174 re~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~D 253 (394)
T PRK06445 174 REEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNS 253 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCC
Confidence 0000 011100 112456799
Q ss_pred ceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChH
Q psy11396 350 GVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPI 429 (829)
Q Consensus 350 GaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~ 429 (829)
||+++||++++.|++++.+++++|+|++...+... +...+...++++||+++|++|+||||+|.|.+++. .
T Consensus 254 GAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~dId~~e~~d~f~~----~ 324 (394)
T PRK06445 254 GASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVPPA-----IMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAV----V 324 (394)
T ss_pred ceEEEEEecHHHHHHCCCCceEEEEEEEEeccCCc-----hhcchHHHHHHHHHHHcCCCHHHcCEEEecccchH----H
Confidence 99999999999999999999999999998764321 22345678999999999999999999999987764 3
Q ss_pred HHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccccc
Q psy11396 430 EFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKS 509 (829)
Q Consensus 430 E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~ 509 (829)
|...++.. +- ...++.++.-...+|||.||+|+.+++.++++|+.
T Consensus 325 ~l~~~e~l-g~---~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~------------------------------- 369 (394)
T PRK06445 325 VLYAIKEL-GL---DPETVNIKGGAIAIGHPLGATGARIVGTLARQLQI------------------------------- 369 (394)
T ss_pred HHHHHHHh-CC---CccccCCCCCHHHcCCCccchHHHHHHHHHHHHHh-------------------------------
Confidence 66666544 21 12234444444446999999999999999999971
Q ss_pred ccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 510 WDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 510 ~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
+..++++++..+-||+.+++|||.
T Consensus 370 -----~~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 370 -----KGKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred -----cCCCEEEEEEcccCChhhEEEEEc
Confidence 123679999999999999999984
No 148
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.87 E-value=6.3e-21 Score=213.67 Aligned_cols=250 Identities=20% Similarity=0.214 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv 280 (829)
...|+.+|+++||+|||+++++++ ++++|+....+. ....+..++..+|+. .|.++|
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id----~vi~g~~~~~~~------------------~~~~a~~va~~lGl~~~~~~~v 73 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADID----AVVVGNAAGGRF------------------QSFPGALIAEYLGLLGKPATRV 73 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccccccc------------------ccchHHHHHHHcCCCCcceeeE
Confidence 457899999999999999998888 888886533211 123567899999994 589999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH---H------HHH---HcCCCC------------------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH---I------KMS---KSGMLS------------------ 330 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~---~------~~~---~~g~ls------------------ 330 (829)
+.+|+|++.++..|+++|++|++|++||+|+|.+...... . .+. ..+.+.
T Consensus 74 ~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~ 153 (375)
T cd00829 74 EAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGT 153 (375)
T ss_pred eCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999976543110 0 000 001110
Q ss_pred -------------------CCC----------------CCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEE
Q psy11396 331 -------------------PDG----------------HCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKG 375 (829)
Q Consensus 331 -------------------~~~----------------~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g 375 (829)
|.. .+.|+. ..+...++||++++||++++.|++. .++++.|+|
T Consensus 154 t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~-~~~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g 231 (375)
T cd00829 154 TREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLR-LLDCCPVSDGAAAVVLASEERAREL-TDRPVWILG 231 (375)
T ss_pred CHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhhcCCCCCceeEEEEecHHHHhhc-CCCCeEEEE
Confidence 000 001111 2355678999999999999999988 678899999
Q ss_pred eeeecCCCCCCCCC--CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH-hc-----------cc
Q psy11396 376 WGVNQDGKTNGITA--PNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES-FN-----------KF 441 (829)
Q Consensus 376 ~~~~~dg~~~~~~~--p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~-~~-----------~~ 441 (829)
++..++........ ....+...++++||++||++++|||++|.|.+++.. +...+... |. +.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~~----~l~~~e~lGl~~~g~~~~~~~~g~ 307 (375)
T cd00829 232 VGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIA----ELLALEDLGFCEKGEGGKLVREGD 307 (375)
T ss_pred EEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH----HHHHHHHcCCCCCCchHHHHHCCC
Confidence 99988865532222 245677899999999999999999999999998864 44333322 11 11
Q ss_pred CCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396 442 SYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 442 ~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~ 479 (829)
....+.+||+...+.+ |||.||+|+..++.++++|+..
T Consensus 308 ~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ 347 (375)
T cd00829 308 TAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGE 347 (375)
T ss_pred ccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCC
Confidence 1123346788777775 9999999999999999999874
No 149
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.86 E-value=3.8e-21 Score=214.77 Aligned_cols=263 Identities=17% Similarity=0.196 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+.+|+++||+|+|+++++|+ .+|+|+..+.. . ...++..++..+|+. -|+++|
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID----~vi~g~~~~~~-----------------~-~~~~~~~~~~~~Gl~~~~p~~~V 84 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVE----EVIMGTVLQGG-----------------Q-GQIPSRQAARAAGIPWEVQTETV 84 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCC-----------------C-CCCHHHHHHHHcCCCCCcceeeh
Confidence 45889999999999999999999 88888653210 0 012334567888884 589999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH-------------HHHH---cC----C----C-------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI-------------KMSK---SG----M----L------- 329 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~-------------~~~~---~g----~----l------- 329 (829)
+++|+||+.|++.|+++|++|.+|++||+|+|.++...... .+.. .+ . +
T Consensus 85 ~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 164 (393)
T PRK08235 85 NKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGEV 164 (393)
T ss_pred hhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHHHHH
Confidence 99999999999999999999999999999999876532100 0000 00 0 0
Q ss_pred ------C--------------------------------------------CCCCCCC-------------CC-----CC
Q psy11396 330 ------S--------------------------------------------PDGHCYS-------------FD-----QR 341 (829)
Q Consensus 330 ------s--------------------------------------------~~~~~~p-------------fd-----~~ 341 (829)
+ ++...|+ |+ ..
T Consensus 165 ~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~g~lt~ 244 (393)
T PRK08235 165 AKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPVFDKTGTITA 244 (393)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCCcccCCCcEec
Confidence 0 0000110 00 01
Q ss_pred CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396 342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421 (829)
Q Consensus 342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt 421 (829)
.+.+.++|||+++||++++.|++.+.+++++|.|++...+.... . ......++++||+++|++|+|||++|.|
T Consensus 245 ~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~-~----~~~~~~a~~~al~~agl~~~did~~e~~-- 317 (393)
T PRK08235 245 GNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKD-F----PRTPGYAINALLEKTGKTVEDIDLFEIN-- 317 (393)
T ss_pred cccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhh-h----cchHHHHHHHHHHHhCCCHHHCCeehhc--
Confidence 13355699999999999999999999999999998765432221 1 1233579999999999999999999998
Q ss_pred CCCCCChHHHHHH--HHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCC
Q psy11396 422 GTKLGDPIEFEAL--CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENS 499 (829)
Q Consensus 422 gt~~gD~~E~~Al--~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~ 499 (829)
|..+.+.+ .+.|+- ...++++++.+..+|||.||+|+.+++.++++|+.+
T Consensus 318 -----d~f~~~~l~~~e~lg~---~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~-------------------- 369 (393)
T PRK08235 318 -----EAFAAVALASTEIAGI---DPEKVNVNGGAVALGHPIGASGARIIVTLIHELKRR-------------------- 369 (393)
T ss_pred -----chhHHHHHHHHHHhCC---CcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhc--------------------
Confidence 44433322 234442 123566777777789999999999999999999762
Q ss_pred CeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 500 PFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 500 ~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++.+.+.+.-||.-.++|||.
T Consensus 370 ----------------~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 370 ----------------GGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred ----------------CCCeEEEEEcccccceEEEEEEe
Confidence 12357777778889999999885
No 150
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=99.86 E-value=1.2e-20 Score=209.88 Aligned_cols=267 Identities=14% Similarity=0.200 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHHH-cCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396 203 QRLFLQNCWTCIED-AGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA 279 (829)
Q Consensus 203 ~~l~l~aa~~AL~d-AGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t 279 (829)
..|+.+++++||++ +|+++++|+ .+|+|...... .....++..++...|+. -|+++
T Consensus 26 ~~L~~~a~~~al~~~agl~~~~Id----~v~~G~~~~~~-----------------~~g~~~ar~~~~~~g~~~~~p~~t 84 (385)
T TIGR02445 26 EDLSAHLMSKLLARNPKVDPAEVE----DIYWGCVQQTL-----------------EQGFNIARNAALLAQIPHTSAAVT 84 (385)
T ss_pred HHHHHHHHHHHHHhccCCCHHHcC----EEEEecccccc-----------------cccchHHHHHHHHCCCCCCcchhh
Confidence 56889999999995 699999999 78888542100 00112444555566653 47799
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH---------H----------HH------HHHcCC------
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI---------H----------IK------MSKSGM------ 328 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---------~----------~~------~~~~g~------ 328 (829)
|+.+|+||+.|++.|+++|++|++|++||||+|.++.... + +. ..+.|.
T Consensus 85 V~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d 164 (385)
T TIGR02445 85 VNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISREQQD 164 (385)
T ss_pred hhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHHHhCCCHHHHH
Confidence 9999999999999999999999999999999998753211 0 00 000000
Q ss_pred ------------------C-------------------CCCCCCCC-------------CCC------CCCCcccccceE
Q psy11396 329 ------------------L-------------------SPDGHCYS-------------FDQ------RANGFVPGEGVG 352 (829)
Q Consensus 329 ------------------l-------------------s~~~~~~p-------------fd~------~~~G~~~gEGaa 352 (829)
+ .++...|+ |+. ..+.+.++||++
T Consensus 165 ~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAa 244 (385)
T TIGR02445 165 AFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGAS 244 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecccCCCcCCceE
Confidence 0 01111110 111 134466799999
Q ss_pred EEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHH
Q psy11396 353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFE 432 (829)
Q Consensus 353 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~ 432 (829)
++||++++.|++++.+++++|+|++.+..... . ...+...+++++|+++|++|+||||+|+|.+++.. |..
T Consensus 245 avvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~--~---~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~~----~l~ 315 (385)
T TIGR02445 245 AMLVMSEQRANELGLKPRARIRSMAVAGCDPS--I---MGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ----ALP 315 (385)
T ss_pred EEEEecHHHHHHCCCCeeEEEEEEEEcCCCCc--c---cchhHHHHHHHHHHHcCCCHHHcCEEEEccccHHH----HHH
Confidence 99999999999999999999999998753221 1 11245679999999999999999999999776643 444
Q ss_pred HHHHHhcccCCCCCccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccc
Q psy11396 433 ALCESFNKFSYHKNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSW 510 (829)
Q Consensus 433 Al~~~~~~~~~~~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~ 510 (829)
.++. ++- . .....+++...+. +|||.||+|+..++.++..|++
T Consensus 316 ~~e~-lg~-~-~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~-------------------------------- 360 (385)
T TIGR02445 316 CLKD-LGL-L-DKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ-------------------------------- 360 (385)
T ss_pred HHHH-cCC-C-CCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh--------------------------------
Confidence 4443 231 0 1111345444444 5999999999999988855543
Q ss_pred cccccCccEEEEeccCCCCceEEEEeee
Q psy11396 511 DIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 511 ~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
...+++++++.|=||.-.++|||.
T Consensus 361 ----~~~~~Gl~~~~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 361 ----KDATFGLATMCIGLGQGIATVFER 384 (385)
T ss_pred ----cCCCeEEEEEecccChhheEEEEe
Confidence 123578899998899999999985
No 151
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.86 E-value=2.7e-20 Score=207.77 Aligned_cols=252 Identities=15% Similarity=0.101 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID 281 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~ 281 (829)
..|+.+|+++||+|||+++++|| ++++++. +++. .+. ...+..++..+|+++ |.+.|+
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID----~iv~~~~-~~~~--------------~~~--~~~~~~va~~LGl~~~~~~~v~ 83 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDID----AVVVGKA-PDFF--------------EGV--MMPELFLADALGATGKPLIRVH 83 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEecc-cccc--------------ccc--cCchHHHHHhcCCCCCceEEEe
Confidence 46899999999999999999998 8888752 2221 000 112357889999975 888999
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH--------------------------HHHHHHcCCCC-----
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI--------------------------HIKMSKSGMLS----- 330 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~--------------------------~~~~~~~g~ls----- 330 (829)
++|+|+..++..|+++|++|.+|.+||+|+|.+..... ..++...|...
T Consensus 84 ~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~ 163 (386)
T PRK08313 84 TAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAM 163 (386)
T ss_pred ccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 99999999999999999999999999999997543200 00111111110
Q ss_pred ------CCCCCCC--------CC--------------CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCC
Q psy11396 331 ------PDGHCYS--------FD--------------QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDG 382 (829)
Q Consensus 331 ------~~~~~~p--------fd--------------~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg 382 (829)
......| ++ ..-+.+.++|||+++||.+.+.|++.+.++.++|+|++..++.
T Consensus 164 vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~ 243 (386)
T PRK08313 164 VAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEP 243 (386)
T ss_pred HHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecC
Confidence 0011111 11 1134466799999999999999998877888899999987664
Q ss_pred CCCC-CCCCCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCChHHHHHHHHH------------hcccCCCCCc
Q psy11396 383 KTNG-ITAPNTKSQIRLQTKIYKKFNIN--PNDIQLLEAHGTGTKLGDPIEFEALCES------------FNKFSYHKNF 447 (829)
Q Consensus 383 ~~~~-~~~p~~~~~~~ai~~Al~~Agl~--~~dId~ve~hgtgt~~gD~~E~~Al~~~------------~~~~~~~~~~ 447 (829)
.... .......+...++++||++||++ ++|||++|.|.++|.. |...+... -.+.....+.
T Consensus 244 ~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~~----~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~ 319 (386)
T PRK08313 244 LAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSWF----EPMWLENLGFAPEGEGWKLTEAGETAIGGR 319 (386)
T ss_pred cccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChHH----HHHHHHHcCCCCCCchHHHHHCCCcCCCCC
Confidence 3211 11222456678999999999998 6999999999998854 44333222 1122233456
Q ss_pred cccCCcccCc-CcchhhhhHHHHHHHHHHHhcC
Q psy11396 448 CALGSVKSNI-GHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 448 ~~v~s~k~~~-GH~~gAsG~~~li~~~l~L~~~ 479 (829)
+||+...+.+ ||+.||+|+.+++++++||+..
T Consensus 320 ~pvN~~GG~l~g~p~gatG~~~~~e~~~qlrG~ 352 (386)
T PRK08313 320 LPVNPSGGVLSSNPIGASGMIRFAEAALQVMGK 352 (386)
T ss_pred ccccCCCcccccCCCcHHHHHHHHHHHHHhccc
Confidence 8887777777 9999999999999999999874
No 152
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.86 E-value=1.9e-20 Score=208.77 Aligned_cols=269 Identities=15% Similarity=0.218 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHH-HcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396 203 QRLFLQNCWTCIE-DAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA 279 (829)
Q Consensus 203 ~~l~l~aa~~AL~-dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t 279 (829)
..|+.+++++||+ |+|+++++++ .+++|...... .....++..++...|+. -|+++
T Consensus 28 ~~L~~~~~~~al~~~agl~~~~Id----~vi~g~~~~~~-----------------~~g~~~ar~~~~~~Gl~~~~p~~~ 86 (387)
T PRK08947 28 EDLSAHLMRSLLARNPALDPAEID----DIIWGCVQQTL-----------------EQGFNIARNAALLAGIPHSVPAVT 86 (387)
T ss_pred HHHHHHHHHHHHHhccCcChHHhC----eEEEEeccccc-----------------cccccHHHHHHHHcCCCCCCccee
Confidence 5688899999999 4899999999 78888432110 00122344577888885 47899
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-------------------HHH------HHHcCC------
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-------------------HIK------MSKSGM------ 328 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-------------------~~~------~~~~g~------ 328 (829)
|+++|+||+.|+..|+++|++|++|++||||+|.++.... .+. ..+.|.
T Consensus 87 V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygisre~~~ 166 (387)
T PRK08947 87 VNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGISREQQD 166 (387)
T ss_pred eechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHHHhCCCHHHHH
Confidence 9999999999999999999999999999999998764210 000 000000
Q ss_pred ------------------C-------------------CCCCCCC------------C-CCC------CCCCcccccceE
Q psy11396 329 ------------------L-------------------SPDGHCY------------S-FDQ------RANGFVPGEGVG 352 (829)
Q Consensus 329 ------------------l-------------------s~~~~~~------------p-fd~------~~~G~~~gEGaa 352 (829)
+ .++...| | |+. ..+...++|||+
T Consensus 167 ~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAa 246 (387)
T PRK08947 167 AFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGAS 246 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccccCCcCCceE
Confidence 0 0011111 0 111 133467899999
Q ss_pred EEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHH
Q psy11396 353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFE 432 (829)
Q Consensus 353 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~ 432 (829)
++||.+++.|++.+.+++++|.|++.+..... .. ..+...+++++|+++|++|+|||++|.|.+++.. |..
T Consensus 247 Avvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~--~~---~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~~----~l~ 317 (387)
T PRK08947 247 AMLVMSESRAKELGLKPRARIRSMAVAGCDPS--IM---GYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ----SLP 317 (387)
T ss_pred EEEEccHHHHHHCCCCccEEEEEEEEcCcCcc--cc---cccHHHHHHHHHHHcCCCHHHCCEEEecccchHH----HHH
Confidence 99999999999999999999999998743222 11 1234678999999999999999999999776643 555
Q ss_pred HHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccc
Q psy11396 433 ALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDI 512 (829)
Q Consensus 433 Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 512 (829)
.++. |+-......++.++.-.-..|||.||+|+.+++.++.+|+.
T Consensus 318 ~~e~-lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~---------------------------------- 362 (387)
T PRK08947 318 CLKD-LGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER---------------------------------- 362 (387)
T ss_pred HHHH-cCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh----------------------------------
Confidence 5543 33101111233444444446999999999999999999975
Q ss_pred cccCccEEEEeccCCCCceEEEEeee
Q psy11396 513 KNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 513 ~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
...++++++++|=||..+.+|||.
T Consensus 363 --~~~~~gl~~~~~g~G~g~a~~~e~ 386 (387)
T PRK08947 363 --KDAQFGLATMCIGLGQGIATVFER 386 (387)
T ss_pred --cCCCEEEEEEeecccceeEEEEEe
Confidence 023578899888778777788874
No 153
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=99.86 E-value=4.7e-20 Score=207.72 Aligned_cols=283 Identities=18% Similarity=0.203 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCC--CCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh-------hhccC
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFS--LSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS-------YFLNL 273 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~--i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia-------~~lgl 273 (829)
..|+.+++++||+|||+++++ |+ ++|+|...... +.+ ...++..++ ..+|+
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID----~vi~G~~~~~~--------------~~~--~~~~a~~~~~~~gl~~~~~gl 108 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVD----KVVVGNFLGEL--------------FSS--QGHLGPAAVGSLGQSGASNAL 108 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcC----EEEEEeccccc--------------ccc--ccchHHHHHHhccCccccccc
Confidence 468899999999999999998 99 77777542111 000 011122233 45566
Q ss_pred C-CcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH--------------------------HH-----
Q psy11396 274 Q-GPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI--------------------------HI----- 321 (829)
Q Consensus 274 ~-Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~--------------------------~~----- 321 (829)
. -|+++|+++|+||+.||..|+++|++|++|++||+|+|.++.... +.
T Consensus 109 ~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 188 (438)
T PTZ00455 109 LYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFTFPCLFAKRMK 188 (438)
T ss_pred CCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcchHHHHHHHHH
Confidence 5 499999999999999999999999999999999999997644210 00
Q ss_pred HHHHcCCCC------------------CCCC--CCCCC------------------------CCCCCcccccceEEEEEc
Q psy11396 322 KMSKSGMLS------------------PDGH--CYSFD------------------------QRANGFVPGEGVGVLMLK 357 (829)
Q Consensus 322 ~~~~~g~ls------------------~~~~--~~pfd------------------------~~~~G~~~gEGaaalvL~ 357 (829)
.+...+.++ |... .++.. ...+.+.++|||+++||.
T Consensus 189 ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~sDGAaA~vl~ 268 (438)
T PTZ00455 189 YIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQVSDGGAGLVLA 268 (438)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCccccceEEEEe
Confidence 011111111 1101 01111 012334569999999999
Q ss_pred cchhhhhCCCce----EEEEEEeeeecCCCCCCCCC-CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHH
Q psy11396 358 KLKDAKKDGDDI----YCIIKGWGVNQDGKTNGITA-PNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFE 432 (829)
Q Consensus 358 ~~~~A~~~g~~i----~a~I~g~~~~~dg~~~~~~~-p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~ 432 (829)
+++.|++.+.++ .++|+|++..++........ ........+++++|++||++|+|||++|.|.+++.. |..
T Consensus 269 See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~daFa~~----~l~ 344 (438)
T PTZ00455 269 SEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHDCFTIA----ELL 344 (438)
T ss_pred cHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchHHHHHHHHHHHHcCCCHHHCcEeeecccChHH----HHH
Confidence 999999988777 78999999886632111100 111223689999999999999999999999888754 444
Q ss_pred HHHHH-hc-----------ccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCC
Q psy11396 433 ALCES-FN-----------KFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLEN 498 (829)
Q Consensus 433 Al~~~-~~-----------~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~ 498 (829)
.++.+ |. +.....+..||+...+.+ |||.||+|+.+++.++++|+..--..+
T Consensus 345 ~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg~ag~~Q-------------- 410 (438)
T PTZ00455 345 MYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKGQCGEYQ-------------- 410 (438)
T ss_pred HHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhhccccCC--------------
Confidence 44332 11 111122346776666665 999999999999999999986311100
Q ss_pred CCeeeccccccccccccCccEEEEeccC-CCCceEEEEee
Q psy11396 499 SPFFINTKCKSWDIKNKKKRMAAINSFG-FSGTNAHIVLM 537 (829)
Q Consensus 499 ~~~~v~~~~~~~~~~~~~~~~a~v~s~G-~gG~na~~vl~ 537 (829)
| .+.++++++.+.| +|+++...||+
T Consensus 411 ----v----------~~~~~~gl~~~~Gg~~~~~~~~vl~ 436 (438)
T PTZ00455 411 ----M----------KNIPALGATLNMGGDDKTAVSTVLQ 436 (438)
T ss_pred ----C----------CCcccEEEEeccCCCcceEEEEEEe
Confidence 0 1124678888887 66666666664
No 154
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.86 E-value=1.3e-20 Score=212.82 Aligned_cols=269 Identities=15% Similarity=0.191 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+.+++++||+|+|+++++|+ .|++|...... ....++..++...|+. -|+++|
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID----~vi~G~~~~~~------------------~~~~~ar~~a~~aGl~~~~P~~tV 87 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIE----QLVFGQVVQMP------------------EAPNIAREIVLGTGMNVHTDAYSV 87 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCCC------------------CccHHHHHHHHHCCCCCCCcceee
Confidence 56889999999999999999998 78888542100 0122455688889995 499999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH-------------------H---HHH----------cCC
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI-------------------K---MSK----------SGM 328 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~-------------------~---~~~----------~g~ 328 (829)
+++|+||+.|+..|+++|++|++|++||||+|.++...... . +.. .++
T Consensus 88 ~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (428)
T PRK08963 88 SRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAV 167 (428)
T ss_pred hhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccccCccc
Confidence 99999999999999999999999999999999886432100 0 000 000
Q ss_pred ---------------------CC-------------------CCCCC---------CCCC--------------------
Q psy11396 329 ---------------------LS-------------------PDGHC---------YSFD-------------------- 339 (829)
Q Consensus 329 ---------------------ls-------------------~~~~~---------~pfd-------------------- 339 (829)
++ ..+.. .|+.
T Consensus 168 ~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r~~~t~e~~~~ 247 (428)
T PRK08963 168 AEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRGDSTLEDYAK 247 (428)
T ss_pred ccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCCCCCCHHHHhc
Confidence 00 00000 0111
Q ss_pred ------------CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q psy11396 340 ------------QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFN 407 (829)
Q Consensus 340 ------------~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Ag 407 (829)
...+.+.++|||+++||.+++.|++.+.+++++|.|++........ . ...+...+++++|+++|
T Consensus 248 ~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~---~-~~~~~~~a~~~al~~AG 323 (428)
T PRK08963 248 LRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQ---D-MLLGPAYATPLALERAG 323 (428)
T ss_pred CCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCchh---h-hhhHHHHHHHHHHHHcC
Confidence 0112345699999999999999999999999999998876421100 0 12334678999999999
Q ss_pred CCCCCccEEEecCCCCCCCChHHHHHHHHHh---------cccCCCCCcc---ccCCcccCc--CcchhhhhHHHHHHHH
Q psy11396 408 INPNDIQLLEAHGTGTKLGDPIEFEALCESF---------NKFSYHKNFC---ALGSVKSNI--GHSATAAGVIGMIKII 473 (829)
Q Consensus 408 l~~~dId~ve~hgtgt~~gD~~E~~Al~~~~---------~~~~~~~~~~---~v~s~k~~~--GH~~gAsG~~~li~~~ 473 (829)
++++|||++|.|.+++.. |...+...- +. ....+.+ ||+...+.+ |||.||+|+..++.++
T Consensus 324 l~~~DiD~~Ei~d~Fa~~----~l~~~e~l~~~~~~~~~~g~-~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~~e~~ 398 (428)
T PRK08963 324 LTLADLTLIDMHEAFAAQ----TLANLQMFASERFAREKLGR-SQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTL 398 (428)
T ss_pred CCHHHCCEEEEccccHHH----HHHHHHHhcCchhhhhcccc-cccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHH
Confidence 999999999999888743 444443320 11 1111223 666666655 9999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 474 LSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 474 l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
++|+.+ ..++++++..+=||...++|||.
T Consensus 399 ~qLrg~------------------------------------~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 399 HELRRR------------------------------------GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred HHHhhc------------------------------------CCCEEEEEEccccChhhEEEEEe
Confidence 999762 12468999999999999999985
No 155
>PRK06059 lipid-transfer protein; Provisional
Probab=99.86 E-value=1.8e-20 Score=210.87 Aligned_cols=282 Identities=14% Similarity=0.130 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID 281 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~ 281 (829)
..|+.+|+++||+|||+++++++ .+++++...+. ......+..++..+|+++ |.++|+
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId----~vi~~~~~~~~-----------------~~~~~~a~~va~~lG~~~~~~~~v~ 82 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQ----LVVGADTIRNG-----------------YPGFVAGATFAQALGWNGAPVSSSY 82 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCc-----------------cCCccHHHHHHHHhCCCCCceeccc
Confidence 56899999999999999998888 67766432110 011123567889999987 899999
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH--H--H-----HHHHH---cCCC------------------C-
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD--I--H-----IKMSK---SGML------------------S- 330 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~--~--~-----~~~~~---~g~l------------------s- 330 (829)
.+|+|++.||.+|+++|++|++|.+||+|+|.+.... . . ..+.. .+.. +
T Consensus 83 ~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yg~s~ 162 (399)
T PRK06059 83 AACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMDLYGATV 162 (399)
T ss_pred chhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHHHhCCCH
Confidence 9999999999999999999999999999999765310 0 0 00000 0110 0
Q ss_pred -----------CCCCCCCCCC---------------------CCCCcccccceEEEEEccchhhhhC--CCceEEEEEEe
Q psy11396 331 -----------PDGHCYSFDQ---------------------RANGFVPGEGVGVLMLKKLKDAKKD--GDDIYCIIKGW 376 (829)
Q Consensus 331 -----------~~~~~~pfd~---------------------~~~G~~~gEGaaalvL~~~~~A~~~--g~~i~a~I~g~ 376 (829)
..+...|... .-+-..++|||+++||.+++.|++. +.+..++|+|+
T Consensus 163 e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~ 242 (399)
T PRK06059 163 EDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAI 242 (399)
T ss_pred HHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEE
Confidence 0000011110 1244567999999999999999887 66677899999
Q ss_pred eeecCCCCC------CC--------CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH-----
Q psy11396 377 GVNQDGKTN------GI--------TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES----- 437 (829)
Q Consensus 377 ~~~~dg~~~------~~--------~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~----- 437 (829)
+...+.... .+ ..++......+++++|+++|++++|||++|.|.+++.. |...+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~~----~l~~~e~lGl~~~ 318 (399)
T PRK06059 243 STVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTAL----ELDWYEHLGLCPK 318 (399)
T ss_pred EEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChHH----HHHHHHHcCCCCC
Confidence 876532210 01 11112223578999999999999999999999987754 44443222
Q ss_pred ------h-cccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccc
Q psy11396 438 ------F-NKFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCK 508 (829)
Q Consensus 438 ------~-~~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~ 508 (829)
+ .+.....+.+||+...+.+ |||.||+|+.+++.+++||+...-..
T Consensus 319 G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~ag~~------------------------- 373 (399)
T PRK06059 319 GEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQAGGR------------------------- 373 (399)
T ss_pred CcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhccCcCCc-------------------------
Confidence 1 1112233456887777776 99999999999999999998731110
Q ss_pred cccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 509 SWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 509 ~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
+-+..+++++.+.|.+|+.+.+|||.
T Consensus 374 ----Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 374 ----QVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred ----cCCCccEEEEeccCCcccceEEEecC
Confidence 01134678888888889999999873
No 156
>PRK06158 thiolase; Provisional
Probab=99.86 E-value=3.9e-20 Score=206.57 Aligned_cols=274 Identities=14% Similarity=0.125 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID 281 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~ 281 (829)
..|+.+|+++||+|||+++++|+ ++++++... ......++..+|+++ |.+.++
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID----~iv~~~~~~----------------------~~~~~~la~~lGl~~~~~~~~~ 82 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVD----GLFTASPDD----------------------ALWGLSVAEYLGIRPRFVDGTM 82 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEecCCC----------------------CCcHHHHHHHcCCCCeeecccc
Confidence 46899999999999999999999 888874210 011235788889975 777899
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEe-ccccccCh---------------------HHHH------HHHHcCCC----
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAG-GVYIINTP---------------------DIHI------KMSKSGML---- 329 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvg-G~e~~~~~---------------------~~~~------~~~~~g~l---- 329 (829)
++|+|+..+|..|+++|++|.+|++||+ |.+.+... .... ++.+.|.-
T Consensus 83 ~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~ 162 (384)
T PRK06158 83 IGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQL 162 (384)
T ss_pred CccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHH
Confidence 9999999999999999999999999985 66643210 0000 00000100
Q ss_pred -------------CCCC----------------CCCCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeec
Q psy11396 330 -------------SPDG----------------HCYSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQ 380 (829)
Q Consensus 330 -------------s~~~----------------~~~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~ 380 (829)
.|.. .+.|+. ..+.+.++||++++||.+++.|++.+.++ +.|.|++..+
T Consensus 163 a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~-~~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~ 240 (384)
T PRK06158 163 AEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLS-VRDCCLVTDGAGAVVMVRADRARDLPRPP-VYVLGAAAAT 240 (384)
T ss_pred HHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCc-hhhcCCccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEec
Confidence 0100 111222 24567899999999999999999876554 5688887766
Q ss_pred CCCCCC-CCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH------------hcccCCCCCc
Q psy11396 381 DGKTNG-ITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES------------FNKFSYHKNF 447 (829)
Q Consensus 381 dg~~~~-~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~------------~~~~~~~~~~ 447 (829)
+..... ..........+++++||++||++|+|||++|.|+++|.. |...+... ..+.....+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~~----~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~ 316 (384)
T PRK06158 241 WHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTIN----TILFLEDLGFCAKGEGGAFVEGGRIAPGGR 316 (384)
T ss_pred CCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchHH----HHHHHHHcCCCCCCcHHHHHHCCCCccCCC
Confidence 543221 111223456789999999999999999999999998864 44443322 1222233455
Q ss_pred cccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEecc
Q psy11396 448 CALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSF 525 (829)
Q Consensus 448 ~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~ 525 (829)
+||+...+++ ||| ||+|+.+++++++||+...-..+ -...++++++++
T Consensus 317 ~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~ag~rQ-----------------------------v~~a~~gl~~~~ 366 (384)
T PRK06158 317 LPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEAGERQ-----------------------------VAGAEVALAHGN 366 (384)
T ss_pred ccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCCCCCc-----------------------------CCCCCEEEEECC
Confidence 7888888776 999 99999999999999987421110 013467899988
Q ss_pred C-CCCceEEEEeee
Q psy11396 526 G-FSGTNAHIVLME 538 (829)
Q Consensus 526 G-~gG~na~~vl~e 538 (829)
| ++.++..+||+.
T Consensus 367 Gg~~~~~~~~vl~~ 380 (384)
T PRK06158 367 GGVLSSQATAILGT 380 (384)
T ss_pred CCcccceEEEEEec
Confidence 7 544555556653
No 157
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.86 E-value=4.3e-20 Score=208.29 Aligned_cols=251 Identities=15% Similarity=0.165 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID 281 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~ 281 (829)
..|+.+|+++||+|||+++++|| ++++|.....+ .+ .+.....++..+|+.+ |+++|+
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID----~vv~~~~~~~~---------------~g--~~~~~~~~~~~lGl~~~~~~~v~ 96 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADID----GSVASYFSDHF---------------QR--QLLAGIMVQDYLGLVPKPSKRIE 96 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEecccccc---------------cc--cchhhHHHHHhcCCCCCceEEEe
Confidence 46899999999999999999998 67766322111 01 1122234678899975 889999
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH--HHH---------H-cCCC------------------C-
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI--KMS---------K-SGML------------------S- 330 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~--~~~---------~-~g~l------------------s- 330 (829)
.+|+|++.||..|++.|++|.+|+|||+|+|.+....... .+. . .+.. +
T Consensus 97 ~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ry~~~yG~t~ 176 (430)
T PRK06365 97 GGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVRHMYEFGTTV 176 (430)
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHHHHHHHCCCH
Confidence 9999999999999999999999999999999865422100 000 0 0000 0
Q ss_pred -----------CCCCCCCCCC---------------------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeee
Q psy11396 331 -----------PDGHCYSFDQ---------------------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGV 378 (829)
Q Consensus 331 -----------~~~~~~pfd~---------------------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~ 378 (829)
......||.. ..+...++|||+|+||.+++.|++.+.++. .|++++.
T Consensus 177 e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~pv-~i~g~g~ 255 (430)
T PRK06365 177 EQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDKPV-LIKAIGT 255 (430)
T ss_pred HHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCCCe-EEEEEEE
Confidence 0000112211 123355799999999999999998776653 4566665
Q ss_pred ecCCCCCCC-----------------------CCCCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCChHHHHH
Q psy11396 379 NQDGKTNGI-----------------------TAPNTKSQIRLQTKIYKKFNIN--PNDIQLLEAHGTGTKLGDPIEFEA 433 (829)
Q Consensus 379 ~~dg~~~~~-----------------------~~p~~~~~~~ai~~Al~~Agl~--~~dId~ve~hgtgt~~gD~~E~~A 433 (829)
.+++..... ..........++++||+++|++ ++|||++|.|.+++.. |...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~~----~l~~ 331 (430)
T PRK06365 256 GSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSS----EIQT 331 (430)
T ss_pred eccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcHH----HHHH
Confidence 544322100 0112334468999999999997 7999999999988754 4444
Q ss_pred HHHH-hc-----------ccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396 434 LCES-FN-----------KFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 434 l~~~-~~-----------~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~ 479 (829)
+... |. +.....+.+||+...+.+ ||+.||+|+.+++.+++||+..
T Consensus 332 lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~ 391 (430)
T PRK06365 332 YEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQGR 391 (430)
T ss_pred HHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHhcc
Confidence 4322 11 111223457888877776 9999999999999999999985
No 158
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.85 E-value=3.3e-20 Score=206.60 Aligned_cols=266 Identities=14% Similarity=0.178 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+.++++++|+|+|+++++|+ .|++|...... .....++..++...|+. -|.++|
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id----~v~~G~~~~~~-----------------~q~~~~ar~~~l~~Gl~~~~p~~tV 85 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVE----QVIGGCVTQAG-----------------EQSNNITRTAWLHAGLPYHVGATTI 85 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccc-----------------cccchHHHHHHHhCCCCCCCceEEE
Confidence 56889999999999999999998 77887432100 00112344556667885 489999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-HH---H----------H-------------HHcCC-----
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-HI---K----------M-------------SKSGM----- 328 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-~~---~----------~-------------~~~g~----- 328 (829)
+++|+||+.|+..|++.|++|++|++||+|+|+|+.... .. . + .+.|.
T Consensus 86 ~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~~ygisre~~ 165 (387)
T PRK07850 86 DCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDV 165 (387)
T ss_pred ecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHHHhCCCHHHH
Confidence 999999999999999999999999999999998865321 00 0 0 00000
Q ss_pred -------------------CC--------C---C-----CC---------------------CCCCC----CCCCCcccc
Q psy11396 329 -------------------LS--------P---D-----GH---------------------CYSFD----QRANGFVPG 348 (829)
Q Consensus 329 -------------------ls--------~---~-----~~---------------------~~pfd----~~~~G~~~g 348 (829)
+. + + +. ...|. ...+.+.++
T Consensus 166 d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~~t~~~~~~~s 245 (387)
T PRK07850 166 DAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGIHTAGTSSQIS 245 (387)
T ss_pred HHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCCccchhcCCcC
Confidence 00 0 0 00 11221 112446789
Q ss_pred cceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCh
Q psy11396 349 EGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDP 428 (829)
Q Consensus 349 EGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~ 428 (829)
|||+++||.+++.|++.+.++.++|.|++........ ...+...+++++|+++|++|+|||++|.|.+++..
T Consensus 246 DGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~did~~ei~d~F~~~--- 317 (387)
T PRK07850 246 DGAAAVLWMDEDRARALGLRPRARIVAQALVGAEPYY-----HLDGPVQATAKVLEKAGMKIGDIDLVEINEAFASV--- 317 (387)
T ss_pred CceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCchh-----hcchHHHHHHHHHHHcCCCHHHcCeeeecccchHH---
Confidence 9999999999999999998899999999875432211 13345789999999999999999999999776643
Q ss_pred HHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccc
Q psy11396 429 IEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCK 508 (829)
Q Consensus 429 ~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~ 508 (829)
|...+ +.++- ...++.++.-.-.+|||.||+|+..++.++.+|+.+
T Consensus 318 -~l~~~-e~lg~---~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~----------------------------- 363 (387)
T PRK07850 318 -VLSWA-QVHEP---DMDKVNVNGGAIALGHPVGSTGARLITTALHELERT----------------------------- 363 (387)
T ss_pred -HHHHH-HHcCC---CCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhc-----------------------------
Confidence 44333 34442 112344444444469999999999999999999762
Q ss_pred cccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 509 SWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 509 ~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++++++..+-||...+++||.
T Consensus 364 -------~~~~g~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 364 -------DKSTALITMCAGGALSTGTIIER 386 (387)
T ss_pred -------CCCeEEEEEccccCceeEEEEEe
Confidence 23568888888899999999985
No 159
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.85 E-value=5.9e-20 Score=204.52 Aligned_cols=252 Identities=15% Similarity=0.120 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv 280 (829)
...|+.+|+++||+|||+++.+++ ++++++....+ .+ ....+..++..+|+. .|.+.|
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID----~~i~~~~~~~~---------------~~--~~~~a~~l~~~lG~~~~~~~~V 87 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDID----CVVIGSAPDAF---------------DG--VHMKGEYLSHGSGGIRKPVSRV 87 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCcc---------------cc--cccHHHHHHHHcCCCCCCeEEE
Confidence 367999999999999999999999 88887421111 00 123455688888886 599999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccCh----HHHH--------------------------HHHHcCCCC
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTP----DIHI--------------------------KMSKSGMLS 330 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~----~~~~--------------------------~~~~~g~ls 330 (829)
+++|+|+..+|..|+++|++|.+|.+||+|+|.+... .... ++.+.|.-.
T Consensus 88 ~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~ 167 (392)
T PRK06065 88 YVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKK 167 (392)
T ss_pred ecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCH
Confidence 9999999999999999999999999999999975321 0000 000000000
Q ss_pred -----------CCCCCCCCCC---------------------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeee
Q psy11396 331 -----------PDGHCYSFDQ---------------------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGV 378 (829)
Q Consensus 331 -----------~~~~~~pfd~---------------------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~ 378 (829)
......|+.. .-+.+.++|||+++||.+++.|++.+.++ ..|.|++.
T Consensus 168 e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~-v~I~g~~~ 246 (392)
T PRK06065 168 EEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTP-VWVEGVGW 246 (392)
T ss_pred HHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCC-EEEEEEEE
Confidence 0011112111 12446789999999999999999887665 35899888
Q ss_pred ecCCCCCCCC-CCCHHHHHHHHHHHHHHcCCCC--CCccEEEecCCCCCCCChHHHHHHHHH-----------h-cccCC
Q psy11396 379 NQDGKTNGIT-APNTKSQIRLQTKIYKKFNINP--NDIQLLEAHGTGTKLGDPIEFEALCES-----------F-NKFSY 443 (829)
Q Consensus 379 ~~dg~~~~~~-~p~~~~~~~ai~~Al~~Agl~~--~dId~ve~hgtgt~~gD~~E~~Al~~~-----------~-~~~~~ 443 (829)
..+....... .........+.+++|+++|+++ +|||++|.|.++|.. |...+... + .+...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~----~l~~~E~lG~~~~G~~~~~~~~g~~~ 322 (392)
T PRK06065 247 TLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYK----ELHHLEGLQLAKRGEAPKLLKEGVFD 322 (392)
T ss_pred ecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHH----HHHHHHHcCCCCCCcHHHHHHCCCcc
Confidence 6654321111 1123445679999999999985 999999999998853 33333221 1 11122
Q ss_pred CCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396 444 HKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 444 ~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~ 479 (829)
..+.+||+...+.+ |||.||+|+.+++.+++||+..
T Consensus 323 ~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 360 (392)
T PRK06065 323 IDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGT 360 (392)
T ss_pred CCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhcc
Confidence 34457887777765 9999999999999999999874
No 160
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.85 E-value=2.3e-20 Score=208.48 Aligned_cols=263 Identities=17% Similarity=0.240 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--cceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~tv 280 (829)
..|+.+++++||+|+|+++++|+ ++++|...... ....++..++..+|+.. |.++|
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID----~vi~g~~~~~~------------------~~~~~a~~~~~~~Gl~~~~p~~~v 84 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQ----EVIMGNVIQAG------------------VGQNPAGQAAYHAGLPFGVTKYTV 84 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCC------------------ccCcHHHHHHHHCCCCCCCcceee
Confidence 56899999999999999999999 88888432110 01123556788899964 99999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH-----------HH-----HHHH----cCCC-----------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI-----------HI-----KMSK----SGML----------- 329 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~-----------~~-----~~~~----~g~l----------- 329 (829)
+.+|+||+.|+..|+++|++|++|++||+|+|.+..... .. .+.. .+..
T Consensus 85 ~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~mal~ 164 (388)
T PRK06366 85 NVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGVS 164 (388)
T ss_pred echhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccHHHH
Confidence 999999999999999999999999999999998652100 00 0000 0000
Q ss_pred ----------C------------------CC-CCCC----CC------------------------C-----CCCCCccc
Q psy11396 330 ----------S------------------PD-GHCY----SF------------------------D-----QRANGFVP 347 (829)
Q Consensus 330 ----------s------------------~~-~~~~----pf------------------------d-----~~~~G~~~ 347 (829)
+ +. +..+ || + ...+.+.+
T Consensus 165 A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g~lt~~d~s~~ 244 (388)
T PRK06366 165 AERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNGILTAGNSAQL 244 (388)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCCCEehhhcCCc
Confidence 0 11 1110 11 1 01223556
Q ss_pred ccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC
Q psy11396 348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD 427 (829)
Q Consensus 348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD 427 (829)
+|||+++||.+++.|++.+.++.++|+|++.......... .....+++++|+++|++|+|||++|.|..++..
T Consensus 245 sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~~-----~~~~~A~~~al~~Agl~~~DiDv~Ei~daFa~~-- 317 (388)
T PRK06366 245 SDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDFV-----EAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIA-- 317 (388)
T ss_pred ccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHhc-----ccHHHHHHHHHHHcCCCHHHcceeeccchhHHH--
Confidence 9999999999999999999889899999988765322111 112589999999999999999999999777643
Q ss_pred hHHHHHHHHHhcccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecc
Q psy11396 428 PIEFEALCESFNKFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINT 505 (829)
Q Consensus 428 ~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~ 505 (829)
|...++.. +- .. . +|+...+.+ |||.||+|+.+++.++.+|+..
T Consensus 318 --~l~~le~l-gl---~g-~-~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~-------------------------- 363 (388)
T PRK06366 318 --SIIVRDQL-KI---DN-E-RFNVNGGAVAIGHPIGNSGSRIIVTLINALKTR-------------------------- 363 (388)
T ss_pred --HHHHHHHh-CC---CC-C-ccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhc--------------------------
Confidence 55555433 21 11 2 455555554 9999999999999999999761
Q ss_pred ccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 506 KCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 506 ~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++.+++..+-||+-.++|||.
T Consensus 364 ----------~~~~g~~~~c~~gg~g~a~~~e~ 386 (388)
T PRK06366 364 ----------HMKTGLATLCHGGGGAHTLTLEM 386 (388)
T ss_pred ----------CCCeEEEEEecccChhhEEEEEe
Confidence 13567888888889999999985
No 161
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.85 E-value=1.1e-19 Score=203.65 Aligned_cols=250 Identities=16% Similarity=0.168 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID 281 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~ 281 (829)
..|+.+++++||+|||+++++|+ ++++|+....+. .......++..+|+.+ |.++|+
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID----~v~vg~~~~~~~------------------~~~~~~~~a~~lGl~~~~~~~v~ 85 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDID----AAWFGTHYDEIG------------------SGKSGTPLSRALRLPNIPVTRVE 85 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc------------------ccchhHHHHHHcCCCCCCEEEEe
Confidence 46889999999999999999999 888885432110 0001134677889976 788899
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH---HH-----HHHHc-CCCC----------------------
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI---HI-----KMSKS-GMLS---------------------- 330 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~---~~-----~~~~~-g~ls---------------------- 330 (829)
.+|+||+.||++|+++|++|++|++||+|+|.+..... .. .+... +.+.
T Consensus 86 ~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~yG~t~e~ 165 (398)
T PRK06157 86 NFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKYGVSRED 165 (398)
T ss_pred cccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHhCCCHHH
Confidence 99999999999999999999999999999998643110 00 00000 0000
Q ss_pred -------------------CCCC------------C----CCCCCCCCCcccccceEEEEEccchhhhhCCCceEEEEEE
Q psy11396 331 -------------------PDGH------------C----YSFDQRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKG 375 (829)
Q Consensus 331 -------------------~~~~------------~----~pfd~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g 375 (829)
|+.. . .|+ ..-+...++|||+++||.+++.|++.+.+..++|+|
T Consensus 166 ~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl-~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~v~I~g 244 (398)
T PRK06157 166 LKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPL-GLFDCCGVSDGAAAAIVTTPEIARALGKKDPVYVKA 244 (398)
T ss_pred HcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCC-chhccCCCCCccEEEEEecHHHHHhhCCCCCeEEEE
Confidence 0000 0 011 112456689999999999999999888756788999
Q ss_pred eeeecCCCCCC---CCCC-CHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCChHHHHHHHHH-hc---------
Q psy11396 376 WGVNQDGKTNG---ITAP-NTKSQIRLQTKIYKKFNIN--PNDIQLLEAHGTGTKLGDPIEFEALCES-FN--------- 439 (829)
Q Consensus 376 ~~~~~dg~~~~---~~~p-~~~~~~~ai~~Al~~Agl~--~~dId~ve~hgtgt~~gD~~E~~Al~~~-~~--------- 439 (829)
++...+..... ...| .......+.++||++||++ ++|||++|.|.+++.. |...++.. |.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~~----~l~~~e~lGl~~~Ge~~~~~ 320 (398)
T PRK06157 245 LQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDCFSIT----ELVTMEDLGLSERGQAWRDV 320 (398)
T ss_pred EEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCChHH----HHHHHHHcCCCCCCchHHHH
Confidence 98765432110 1111 1223457899999999998 7999999999988754 44444322 11
Q ss_pred --ccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396 440 --KFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 440 --~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~ 479 (829)
+.....+.+||+...+.+ |||.||+|+.+++.+++||+..
T Consensus 321 ~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 364 (398)
T PRK06157 321 LDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGR 364 (398)
T ss_pred HCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhccc
Confidence 111223457888777765 9999999999999999999874
No 162
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.84 E-value=8.8e-20 Score=205.37 Aligned_cols=254 Identities=19% Similarity=0.184 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID 281 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~ 281 (829)
..|+.+|+++||+|||+++++|+ ++++|+..+++.. . .......+. ....++.| |+++|+
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID----~vi~g~~~~~~~~--~-----------~~~~~~~~~--~~~~~~~g~~~~~v~ 87 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIE----VVHVGNFFGELFA--G-----------QGHLGAMPA--TVHPALWGVPASRHE 87 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc--c-----------ccccchHHH--HHhhcCCCCceeecc
Confidence 56899999999999999999999 8888865443210 0 000000111 12223333 899999
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH---HHH------HHcC----CC------------------C
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH---IKM------SKSG----ML------------------S 330 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~---~~~------~~~g----~l------------------s 330 (829)
++|+|++.||..|+.+|++|++|++||+|+|.+...... ..+ ...+ .. +
T Consensus 88 ~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t 167 (403)
T PRK06289 88 AACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLD 167 (403)
T ss_pred cccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999986532110 000 0000 00 0
Q ss_pred ------------CCCCCCCCCC--------------------------CCCCcccccceEEEEEccchhhhhCCC-ceEE
Q psy11396 331 ------------PDGHCYSFDQ--------------------------RANGFVPGEGVGVLMLKKLKDAKKDGD-DIYC 371 (829)
Q Consensus 331 ------------~~~~~~pfd~--------------------------~~~G~~~gEGaaalvL~~~~~A~~~g~-~i~a 371 (829)
......|+.. ..+.+.++|||+++||.+++.|++.+. ++.+
T Consensus 168 ~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~ 247 (403)
T PRK06289 168 EEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIP 247 (403)
T ss_pred HHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCE
Confidence 0000011100 112355799999999999999988775 6778
Q ss_pred EEEEeeeecCCCCCCC------CCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH-hcc---
Q psy11396 372 IIKGWGVNQDGKTNGI------TAP-NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES-FNK--- 440 (829)
Q Consensus 372 ~I~g~~~~~dg~~~~~------~~p-~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~-~~~--- 440 (829)
+|+|++..++...... ..| .......+.++||++||++++|||++|.|.+++.. |...++.. |..
T Consensus 248 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~~----~l~~le~lGl~~~Ge 323 (403)
T PRK06289 248 RIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPS----EYLAIDHIGLTGPGE 323 (403)
T ss_pred EEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccchHH----HHHHHHHcCCCCCCc
Confidence 9999988755422111 011 22335679999999999999999999999998864 44444322 111
Q ss_pred --------cCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396 441 --------FSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 441 --------~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~ 479 (829)
.....+.+||+...+.+ |||.||+|+.+++.++.||+..
T Consensus 324 ~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 372 (403)
T PRK06289 324 SWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGT 372 (403)
T ss_pred HHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhcc
Confidence 11124557888888776 9999999999999999999873
No 163
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.84 E-value=1e-19 Score=203.41 Aligned_cols=266 Identities=18% Similarity=0.205 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~tv 280 (829)
..|+.+++++||+|||++++++| ++++|.... .. .....++..+....|+ ..|.++|
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID----~vv~g~~~~-~~----------------~~~~~~~~~~~l~~gl~~~~p~~~v 85 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVD----DVIFGCVDT-IG----------------PQAGNIARTSWLAAGLPEEVPGVTV 85 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC----EEEEEeecc-CC----------------cccccHHHHHHHHcCCCCCCceeee
Confidence 45889999999999999999999 888874310 00 0001122222223344 4689999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccC-hH--H--HH-------------HH-HHcCC--CC---------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINT-PD--I--HI-------------KM-SKSGM--LS--------- 330 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~-~~--~--~~-------------~~-~~~g~--ls--------- 330 (829)
+.+|+||+.|+..|+++|++|++|++||+|+|.++. |. . .. .+ ...+. .+
T Consensus 86 ~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~ 165 (382)
T PRK07801 86 DRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIA 165 (382)
T ss_pred cchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999997643 21 0 00 00 00110 00
Q ss_pred ------------------------CCC-CC----CCCC----------------------------CCCCCcccccceEE
Q psy11396 331 ------------------------PDG-HC----YSFD----------------------------QRANGFVPGEGVGV 353 (829)
Q Consensus 331 ------------------------~~~-~~----~pfd----------------------------~~~~G~~~gEGaaa 353 (829)
+.. .. .|++ ...+...++|||++
T Consensus 166 ~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaaa 245 (382)
T PRK07801 166 EKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGASA 245 (382)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceEE
Confidence 000 00 0110 12234567899999
Q ss_pred EEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHH
Q psy11396 354 LMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEA 433 (829)
Q Consensus 354 lvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~A 433 (829)
+||++++.|++.+.+++++|.|++...+....... +...++++||++||++|+|||++|.|.+++.. |...
T Consensus 246 ~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~a~~~a~~~agi~~~did~~e~~d~Fa~~----~~~~ 316 (382)
T PRK07801 246 VLLASERAVKRHGLTPRARIHHLSVRGDDPVFMLT-----APIPATRYALEKTGLSIDDIDVVEINEAFAPV----VLAW 316 (382)
T ss_pred EEEecHHHHHHCCCCccEEEEEEEEecCChHhhcc-----ChHHHHHHHHHHcCCCHHHcCEeeecccchHH----HHHH
Confidence 99999999999998889999998765543211111 22468999999999999999999999777643 5555
Q ss_pred HHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecccccccccc
Q psy11396 434 LCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIK 513 (829)
Q Consensus 434 l~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 513 (829)
+.. ++- ..+++..+.-...+|||.||+|+.+++.++++|+..
T Consensus 317 ~e~-lG~---~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~---------------------------------- 358 (382)
T PRK07801 317 LKE-TGA---DPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERT---------------------------------- 358 (382)
T ss_pred HHH-hCC---CchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc----------------------------------
Confidence 443 331 122344444444569999999999999999999861
Q ss_pred ccCccEEEEeccCCCCceEEEEeee
Q psy11396 514 NKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 514 ~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..+++++++.|-||+.+++||+.
T Consensus 359 --~~~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 359 --GGRYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred --CCCEEEEEEcccccceeEEEEEe
Confidence 12467888888889999998874
No 164
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=99.84 E-value=8.2e-20 Score=205.57 Aligned_cols=246 Identities=15% Similarity=0.211 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-C-cceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-G-PCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-G-p~~tv 280 (829)
..|+.+++++||+|+|+++++|+ .+++|..... .....++..++...|+. + |.++|
T Consensus 32 ~~L~~~a~~~al~~agl~~~~Id----~vi~G~~~~~------------------~~~~~~ar~~~l~aGl~~~~p~~~V 89 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDPKLIE----QLVFGQVVQM------------------PEAPNIAREIVLGTGMNVHTDAYSV 89 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCc------------------CccchHHHHHHHhCCCCCCCchhhh
Confidence 46889999999999999999998 6777743210 01123555666667886 3 99999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHH---------------HH-------H------c------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIK---------------MS-------K------S------ 326 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~---------------~~-------~------~------ 326 (829)
+.+|+||+.|+..|+++|++|++|++||||+|+++....... +. . .
T Consensus 90 ~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (430)
T TIGR02446 90 TRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLKDLMPVPPAV 169 (430)
T ss_pred hhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhhhhcccCccc
Confidence 999999999999999999999999999999999863110000 00 0 0
Q ss_pred -----CC-C-------------C---------------C----CCC---------CCCC---------------------
Q psy11396 327 -----GM-L-------------S---------------P----DGH---------CYSF--------------------- 338 (829)
Q Consensus 327 -----g~-l-------------s---------------~----~~~---------~~pf--------------------- 338 (829)
+. + + . ++. ..|+
T Consensus 170 ~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~r~~~t~e~~~~ 249 (430)
T TIGR02446 170 AEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIRHNSTLAGYAK 249 (430)
T ss_pred ccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCCCCCCCHHHHhc
Confidence 00 0 0 0 000 0111
Q ss_pred -----C------CCCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q psy11396 339 -----D------QRANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFN 407 (829)
Q Consensus 339 -----d------~~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Ag 407 (829)
+ ...+.+.++|||+++||.+++.|++.+.++.++|++++.......... + .....++++||++||
T Consensus 250 ~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~~--~--~~~~~a~~~al~~Ag 325 (430)
T TIGR02446 250 LRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQDM--L--MGPSYATPLALQRAG 325 (430)
T ss_pred CCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHhh--c--ccHHHHHHHHHHHcC
Confidence 0 022345679999999999999999998888899999886632221001 1 122468999999999
Q ss_pred CCCCCccEEEecCCCCCCCChHHHHHHHHH----hcc----cCCCCCcc---ccCCcccCc--CcchhhhhHHHHHHHHH
Q psy11396 408 INPNDIQLLEAHGTGTKLGDPIEFEALCES----FNK----FSYHKNFC---ALGSVKSNI--GHSATAAGVIGMIKIIL 474 (829)
Q Consensus 408 l~~~dId~ve~hgtgt~~gD~~E~~Al~~~----~~~----~~~~~~~~---~v~s~k~~~--GH~~gAsG~~~li~~~l 474 (829)
++++|||++|.|.+++.. |...+... |.. .....+.+ ||+...+.+ |||.||+|+.+++.+++
T Consensus 326 l~~~Did~~Ei~daFa~~----~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~v~e~~~ 401 (430)
T TIGR02446 326 LALSDLTLIDMHEAFAAQ----TLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLR 401 (430)
T ss_pred CCHHHCCEEEeccccHHH----HHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHH
Confidence 999999999999888753 55555443 111 00111223 666666654 99999999999999999
Q ss_pred HHhc
Q psy11396 475 SLKH 478 (829)
Q Consensus 475 ~L~~ 478 (829)
+|+.
T Consensus 402 qL~g 405 (430)
T TIGR02446 402 ELKR 405 (430)
T ss_pred HHhh
Confidence 9976
No 165
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.84 E-value=1.2e-19 Score=205.08 Aligned_cols=269 Identities=17% Similarity=0.213 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+.+|+++||+|||+++++|+ ++++|+..... . ....+..++..+|+. .|.++|
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID----~vi~g~~~~~~-----------------~-~~~~a~~v~~~lGl~~~~p~~~v 85 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLD----EVILGCAMPSP-----------------D-EANIARVVALRLGCGEKVPAWTV 85 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCC-----------------C-cChHHHHHHHHhCcCCCceeeec
Confidence 56899999999999999999999 88888543110 0 113455688899994 499999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------------------H-------HHHHH------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------------------H-------IKMSK------ 325 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------------------~-------~~~~~------ 325 (829)
+.+|+|++.|+..|+++|++|.+|++||+|+|.++.... . ..+..
T Consensus 86 ~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (426)
T PRK08170 86 QRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGLL 165 (426)
T ss_pred cchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccccccccccccC
Confidence 999999999999999999999999999999997553110 0 00000
Q ss_pred cC--------CC-------------C------------CCCCC------------------CCCCC--------------
Q psy11396 326 SG--------ML-------------S------------PDGHC------------------YSFDQ-------------- 340 (829)
Q Consensus 326 ~g--------~l-------------s------------~~~~~------------------~pfd~-------------- 340 (829)
.+ .+ + ..... .|++.
T Consensus 166 ~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~r~~~t~e~~~ 245 (426)
T PRK08170 166 RGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGVRPDSSMEKLA 245 (426)
T ss_pred ccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCCCCCCCHHHHh
Confidence 00 00 0 00000 11111
Q ss_pred --------C------CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHc
Q psy11396 341 --------R------ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKF 406 (829)
Q Consensus 341 --------~------~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~A 406 (829)
. .+.+.++|||+++||++++.|++.+.++.++|.+++....... . ...+...+++++|++|
T Consensus 246 ~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~--~---~~~~~~~a~~~al~~a 320 (426)
T PRK08170 246 KLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPS--Q---MGLGPVHAATPLLQRH 320 (426)
T ss_pred cCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCch--h---hcccHHHHHHHHHHHc
Confidence 0 3345679999999999999999999999889999877653321 1 1224568999999999
Q ss_pred CCCCCCccEEEecCCCCCCCChHHHHHHHHH----hcccCC-------CCCccccCCcccCc--CcchhhhhHHHHHHHH
Q psy11396 407 NINPNDIQLLEAHGTGTKLGDPIEFEALCES----FNKFSY-------HKNFCALGSVKSNI--GHSATAAGVIGMIKII 473 (829)
Q Consensus 407 gl~~~dId~ve~hgtgt~~gD~~E~~Al~~~----~~~~~~-------~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~ 473 (829)
|++|+|||++|.|..++.. |...+... |..... .....||+...+.+ |||.||+|+.++..++
T Consensus 321 Gl~~~did~~ei~daFa~~----~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~~~~~~l~ 396 (426)
T PRK08170 321 GLTLEDLDLWEINEAFAAQ----VLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLL 396 (426)
T ss_pred CCCHHHcCEEEecchhHHH----HHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccHHHHHHHH
Confidence 9999999999999776643 33222211 100000 01124676666665 9999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 474 LSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 474 l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
.+|++. +.++++++...-||.-.++|||.
T Consensus 397 ~~l~~~------------------------------------~~~~g~~~~c~~gg~g~a~~~e~ 425 (426)
T PRK08170 397 HALKRR------------------------------------GTKRGIAAICIGGGQGGAMLLER 425 (426)
T ss_pred HHHHhh------------------------------------CCCeEEEEEecCCChhheEEEEe
Confidence 999761 23578888888899999999985
No 166
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.84 E-value=2.9e-19 Score=198.88 Aligned_cols=266 Identities=19% Similarity=0.210 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhH--hhhhccCCCcceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPAR--VSYFLNLQGPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--ia~~lgl~Gp~~tv 280 (829)
..|+.+++++||+|+|+++++|+ .+++|..... +.....++.. +...++..-|.++|
T Consensus 27 ~~L~~~a~~~al~~a~l~~~~Id----~vi~G~~~~~-----------------~~~~~~~ar~~~l~~gl~~~vP~~tV 85 (390)
T PRK06504 27 ADLAAQVLDALVDRSGADPALIE----DVIMGCVSQV-----------------GEQATNVARNAVLASKLPESVPGTSI 85 (390)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccc-----------------ccccccHHHHHHHHcCCCCCCceEEE
Confidence 56889999999999999999999 7777744210 0000112222 22333335699999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH--H--------------HHHHc-C--C-------------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH--I--------------KMSKS-G--M------------- 328 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~--~--------------~~~~~-g--~------------- 328 (829)
+.+|+||+.|+..|+++|++|++|++||||+|+|+..... . .+... . .
T Consensus 86 ~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aae~~a~~ 165 (390)
T PRK06504 86 DRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAEMMAKK 165 (390)
T ss_pred echhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999988642210 0 00000 0 0
Q ss_pred --CC------------------C-CC-------------------------------------CCCCCCC-----CCCCc
Q psy11396 329 --LS------------------P-DG-------------------------------------HCYSFDQ-----RANGF 345 (829)
Q Consensus 329 --ls------------------~-~~-------------------------------------~~~pfd~-----~~~G~ 345 (829)
++ + .+ ..+|... ..+..
T Consensus 166 ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~~g~lt~~n~s 245 (390)
T PRK06504 166 YGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAEGGRLTAATAS 245 (390)
T ss_pred hCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCCCCCCcCccCC
Confidence 00 0 00 0111110 12335
Q ss_pred ccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy11396 346 VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKL 425 (829)
Q Consensus 346 ~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~ 425 (829)
.++|||+++||.+++.|++.+.++.+.|.+++........ ...+...+++++|+++|++|+|||++|.|.+++..
T Consensus 246 ~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~-----~~~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa~~ 320 (390)
T PRK06504 246 QICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDPVI-----MLEAPLPATERALKKAGMKIDDIDLYEVNEAFASV 320 (390)
T ss_pred CCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCchh-----hhccHHHHHHHHHHHcCCCHHHCCEEEecccchHH
Confidence 6789999999999999999988888888887765443211 12244569999999999999999999999887753
Q ss_pred CChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeecc
Q psy11396 426 GDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINT 505 (829)
Q Consensus 426 gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~ 505 (829)
|...+. .|+- ...++.++.-.-.+|||.||+|+.++..++.+|++.
T Consensus 321 ----~l~~~e-~lG~---~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~-------------------------- 366 (390)
T PRK06504 321 ----PLAWLK-ATGA---DPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQR-------------------------- 366 (390)
T ss_pred ----HHHHHH-HhCC---CCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhh--------------------------
Confidence 444444 3331 122333443344469999999999999999999761
Q ss_pred ccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 506 KCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 506 ~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++++++..|-||+.+.+||+.
T Consensus 367 ----------~~~~gl~~~~~ggg~g~a~ile~ 389 (390)
T PRK06504 367 ----------GKRYGLQTMCEGGGMANVTIVER 389 (390)
T ss_pred ----------CCCeEEEEEeecccceeEEEEEe
Confidence 12467788887788888888874
No 167
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.83 E-value=2.2e-19 Score=199.61 Aligned_cols=246 Identities=17% Similarity=0.170 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeec
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAID 281 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~ 281 (829)
..|+.+|+++||+|||+++.+|| +++.+.. .. .. ....++..+|+++ |...++
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID----~~~~~~~---~~---------------~~----~~~~~~~~lGl~~~~~~~v~ 79 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVD----GYFCAGD---AP---------------GL----GPASMVDYLGLKLRHVDSTE 79 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEcCC---CC---------------Cc----cHHHHHHhCCCCCeeecccc
Confidence 46899999999999999999998 5544210 00 00 0134888899975 778899
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH---H----HH------HHHH-cCCCC-----------------
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD---I----HI------KMSK-SGMLS----------------- 330 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~---~----~~------~~~~-~g~ls----------------- 330 (829)
++|+|+..++..|+++|++|.||+|||+|+|.+.... . +. .+.. .|...
T Consensus 80 ~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~ 159 (388)
T PRK08142 80 TGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGT 159 (388)
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCc
Confidence 9999999999999999999999999999998743210 0 00 0000 01100
Q ss_pred -------------CCCCCCCCCC---------------------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEe
Q psy11396 331 -------------PDGHCYSFDQ---------------------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGW 376 (829)
Q Consensus 331 -------------~~~~~~pfd~---------------------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~ 376 (829)
......|+.. ..+.+.++|||+++||.+++.|++.+ ++.+.|+|+
T Consensus 160 t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~-~~~v~I~g~ 238 (388)
T PRK08142 160 TSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLK-RPLVKVLGA 238 (388)
T ss_pred CHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcC-CCCEEEEEE
Confidence 0001112111 13446779999999999999999876 455889999
Q ss_pred eeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH-hc----------cc-CCC
Q psy11396 377 GVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES-FN----------KF-SYH 444 (829)
Q Consensus 377 ~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~-~~----------~~-~~~ 444 (829)
+..++................++++||++||++|+|||++|.|.++|.. |...+... |. +. ...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~~----~~~~~E~lGl~~~Ge~~~~v~~g~~~~ 314 (388)
T PRK08142 239 GEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTIT----VLMQLEDLGFCKKGEGGKFVADGNLIS 314 (388)
T ss_pred EEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchHH----HHHHHHHcCCCCCCchHHHHHCCCccc
Confidence 9877654322222234455789999999999999999999999998864 44444322 11 11 111
Q ss_pred -CCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396 445 -KNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 445 -~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~ 479 (829)
.+.+||+...+.+ |||.||+|+.+++++++||+..
T Consensus 315 ~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ 352 (388)
T PRK08142 315 GVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGE 352 (388)
T ss_pred CCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCC
Confidence 2568886666665 8999999999999999999873
No 168
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.83 E-value=1.6e-19 Score=199.77 Aligned_cols=264 Identities=16% Similarity=0.217 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~tv 280 (829)
..|+..+.+++|+++|+++++++ -|++|..... +.....++..++...|| +-|.+||
T Consensus 30 ~~L~~~~~~~~l~r~~i~~~~id----~vi~G~~~~~-----------------g~~g~n~aR~~al~aglp~~vp~~tv 88 (417)
T PRK06025 30 QHLAATVLKALAERNGLNTADVD----DIIWSTSSQR-----------------GKQGGDLGRMAALDAGYDIKASGVTL 88 (417)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCC----EEEEEcCCCc-----------------CcccCcHHHHHHHhCCCCCCCCeeee
Confidence 34677889999999999999998 6777744210 01113356667777777 5699999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHH-----------HHH--cCC---C---C-----------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIK-----------MSK--SGM---L---S----------- 330 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~-----------~~~--~g~---l---s----------- 330 (829)
+..|+||+.||.+|+++|++|++|++|+||+|+|+..+.+.. ... .+. . .
T Consensus 89 nr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~a~~ 168 (417)
T PRK06025 89 DRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATM 168 (417)
T ss_pred ccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999885432100 000 000 0 0
Q ss_pred ---------------------------------C------------CCCCC-------------CCCC------CCCCc-
Q psy11396 331 ---------------------------------P------------DGHCY-------------SFDQ------RANGF- 345 (829)
Q Consensus 331 ---------------------------------~------------~~~~~-------------pfd~------~~~G~- 345 (829)
| +...| .|.. ..+|.
T Consensus 169 ~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~~~~~~~~g~~ 248 (417)
T PRK06025 169 EGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDDKGTT 248 (417)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccccccccCCccc
Confidence 0 00001 1321 01232
Q ss_pred ------------------------ccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHH
Q psy11396 346 ------------------------VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTK 401 (829)
Q Consensus 346 ------------------------~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~ 401 (829)
.++|||+++||++++.|++.|.+++++|.|++...+...... .+...++++
T Consensus 249 ~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~~~-----~~p~~Ai~~ 323 (417)
T PRK06025 249 YRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLML-----NAPVPAAKK 323 (417)
T ss_pred cccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchhhc-----ccHHHHHHH
Confidence 359999999999999999999999999999998865433211 233579999
Q ss_pred HHHHcCCCCCCccEEEecCCCCCCCChHHHHHH--HHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcC
Q psy11396 402 IYKKFNINPNDIQLLEAHGTGTKLGDPIEFEAL--CESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 402 Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al--~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~ 479 (829)
+|+++|++++|||++|.| |......+ .+.++ ....++.++..+..+||+.||+|+..++.++.+|+.+
T Consensus 324 aL~~AGl~~~DID~~ei~-------eaFa~~~l~~~~~lg---~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~ 393 (417)
T PRK06025 324 VLAKAGLTKDDIDLWEIN-------EAFAVVAEKFIRDLD---LDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERR 393 (417)
T ss_pred HHHHcCCCHHHCcEEEEc-------hHHHHHHHHHHHHcC---CChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999 44333332 22333 1234566677777789999999999999999999651
Q ss_pred CCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 480 VLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 480 ~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..+++++.-.+.||.-.++|||.
T Consensus 394 ------------------------------------g~~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 394 ------------------------------------GLKRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred ------------------------------------CCCeEEEEEEeeccceeEEEEEe
Confidence 12456888888999999999985
No 169
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.82 E-value=1.1e-18 Score=193.25 Aligned_cols=275 Identities=16% Similarity=0.141 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHHHcC-CCC-CCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Cccee
Q psy11396 203 QRLFLQNCWTCIEDAG-YNP-FSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLA 279 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAG-l~~-~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~t 279 (829)
..|+.+|+++||+||| +++ ++|+ ++++++. ..+. + .......++..+|+. .|.+.
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId----~~~~~~~-~~~~---------------~--~~~~~~~~~~~lg~~~~~~~~ 83 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVD----SFISCQE-DFWE---------------G--IAIADEFAPDQIGGAMRPTMT 83 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCC----EEEEecC-cccC---------------c--ccccchhHHHHcccCCCCeEE
Confidence 4689999999999999 987 7998 7777531 1110 0 001112355677874 47777
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH------------------------HHH------HHHcCCC
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI------------------------HIK------MSKSGML 329 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~------------------------~~~------~~~~g~l 329 (829)
| |+|+..++..|+++|++|.||++||.|++.+..... +.. +.+.|..
T Consensus 84 v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t 160 (385)
T PRK06066 84 V---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGIT 160 (385)
T ss_pred E---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcC
Confidence 6 899999999999999999999999999986533100 000 0000100
Q ss_pred C-----------CCCCCCCCCC---------------------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEee
Q psy11396 330 S-----------PDGHCYSFDQ---------------------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWG 377 (829)
Q Consensus 330 s-----------~~~~~~pfd~---------------------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~ 377 (829)
. ......|... ..+.+.++|||+++||.+++.|++.+.++. +|+|++
T Consensus 161 ~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g 239 (385)
T PRK06066 161 REDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPV-WIKGIG 239 (385)
T ss_pred HHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCCCE-EEEEEE
Confidence 0 0001111111 134467899999999999999998887765 899998
Q ss_pred eecCCCCCCCCC-CCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCCCCCChHHHHHHHHH-h-----------cccC
Q psy11396 378 VNQDGKTNGITA-PNTKSQIRLQTKIYKKFNIN--PNDIQLLEAHGTGTKLGDPIEFEALCES-F-----------NKFS 442 (829)
Q Consensus 378 ~~~dg~~~~~~~-p~~~~~~~ai~~Al~~Agl~--~~dId~ve~hgtgt~~gD~~E~~Al~~~-~-----------~~~~ 442 (829)
...+........ ........+.++||++||++ ++|||++|.|.++|.. |...+... | .+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~~----~l~~~e~lG~~~~Ge~~~~v~~G~~ 315 (385)
T PRK06066 240 WSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSYK----ELQHIEALRLSEEPEKDSLLREGNF 315 (385)
T ss_pred EecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChHH----HHHHHHHcCCCCCCchHHHHHCCCC
Confidence 866532211111 12333457999999999998 6999999999988854 44333322 1 1112
Q ss_pred CCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEE
Q psy11396 443 YHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMA 520 (829)
Q Consensus 443 ~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a 520 (829)
...+.+||+...+.+ |||.||+|+.+++.+++||+...=. .+ ...+++
T Consensus 316 ~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~Ag~-----------------------------rQ-~~a~~~ 365 (385)
T PRK06066 316 DPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGEAGA-----------------------------RQ-GKAERA 365 (385)
T ss_pred CCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHcccccc-----------------------------cC-CCCcEE
Confidence 234567888888776 9999999999999999999873100 01 235678
Q ss_pred EEeccC--CCCceEEEEee
Q psy11396 521 AINSFG--FSGTNAHIVLM 537 (829)
Q Consensus 521 ~v~s~G--~gG~na~~vl~ 537 (829)
++.+.| ++++.+.+|||
T Consensus 366 l~~~~gg~~~~~~~v~v~~ 384 (385)
T PRK06066 366 VVASWRGIPTLTGSVVVVE 384 (385)
T ss_pred EEcCCCccCCccEEEEEEe
Confidence 888877 56677777776
No 170
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.81 E-value=7.6e-19 Score=196.50 Aligned_cols=251 Identities=20% Similarity=0.181 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhh-HhhhhccCCC-ccee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPA-RVSYFLNLQG-PCLA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~ia~~lgl~G-p~~t 279 (829)
...|+.+++++||+|+|+++++|+ .+++|+..+++. + . .++. .+...+|+.+ |+++
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID----~vi~g~~~~~~~---------------g--~-~~~~~~~~~~lg~~~~p~~~ 80 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVE----EACLGQVLGAGE---------------G--Q-NCAQQAAMHAGGLQEAPAIG 80 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEccCCcc---------------c--C-cHHHHHHHHcCCCCCCcEEE
Confidence 456889999999999999999998 788886654431 0 0 1121 2455677765 9999
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------HH-HH--------------------HHcCC
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------HI-KM--------------------SKSGM 328 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------~~-~~--------------------~~~g~ 328 (829)
|+++|+|++.|+..|+++|++|++|++||+|+|.++.... +. .+ ...|.
T Consensus 81 V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~~~~~~~~~G~ 160 (393)
T cd00826 81 MNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKDGR 160 (393)
T ss_pred ecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999998753210 00 00 01111
Q ss_pred CC--------CC--C----CCCCCCC------------------------CCCCcccccceEEEEEccchhhhhCCC-ce
Q psy11396 329 LS--------PD--G----HCYSFDQ------------------------RANGFVPGEGVGVLMLKKLKDAKKDGD-DI 369 (829)
Q Consensus 329 ls--------~~--~----~~~pfd~------------------------~~~G~~~gEGaaalvL~~~~~A~~~g~-~i 369 (829)
.. .. + ...|+.. ..+.+.++|||+++||.+++.|++.+. ..
T Consensus 161 ~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l~l~~~ 240 (393)
T cd00826 161 FKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSK 240 (393)
T ss_pred CHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHHHHHHcCCccc
Confidence 10 00 0 0012211 112245689999999999999998774 11
Q ss_pred EEEEEEeeeecCCCCCC-CCC----CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH-hcc---
Q psy11396 370 YCIIKGWGVNQDGKTNG-ITA----PNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES-FNK--- 440 (829)
Q Consensus 370 ~a~I~g~~~~~dg~~~~-~~~----p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~-~~~--- 440 (829)
..+|.+.+...+..... .+. ....+...++++||++||++++|||++|.|.+++.. |...+..+ |..
T Consensus 241 ~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~~----~l~~~e~lgl~~~g~ 316 (393)
T cd00826 241 AREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAAN----ACATNEALGLCPEGQ 316 (393)
T ss_pred ccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHHH----HHHHHHHhCCCcccc
Confidence 23444444332211110 000 123345789999999999999999999999776643 44444332 111
Q ss_pred --------cCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhc
Q psy11396 441 --------FSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKH 478 (829)
Q Consensus 441 --------~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~ 478 (829)
.....+..||+...+.+ |||.||+|+.+++.++++|+.
T Consensus 317 ~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 317 GGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKG 364 (393)
T ss_pred hhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhh
Confidence 11122346787777765 999999999999999999976
No 171
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=99.80 E-value=1.2e-18 Score=196.18 Aligned_cols=275 Identities=16% Similarity=0.177 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh--ccCCCcceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF--LNLQGPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~--lgl~Gp~~tv 280 (829)
..|+.+++++||+|+|+++++++ .+++|.....- ....++..++.. ++...|+++|
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id----~vv~G~~~~~~------------------~~~~~~r~~~l~~gl~~~~p~~~V 89 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLG----EVVAGAVLKHS------------------RDFNLTRECVLGSALSPYTPAYDL 89 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCC------------------ccccHHHHHHHHcCCCCCCceeee
Confidence 46889999999999999999999 77777432100 001133443444 4446899999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH----------------------------HHH------H-
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI----------------------------KMS------K- 325 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~----------------------------~~~------~- 325 (829)
+++|+||+.|+..|+++|++|.+|++||||+|.++...... ... .
T Consensus 90 ~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (427)
T PRK09268 90 QQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPKHLAPEIPRN 169 (427)
T ss_pred echhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccccccccCccc
Confidence 99999999999999999999999999999999876421100 000 0
Q ss_pred ----cCC-C-------------C----------------C-------CCCCCCC-------------------------C
Q psy11396 326 ----SGM-L-------------S----------------P-------DGHCYSF-------------------------D 339 (829)
Q Consensus 326 ----~g~-l-------------s----------------~-------~~~~~pf-------------------------d 339 (829)
.+. + + . +....|+ +
T Consensus 170 ~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~e~l~~~~~v~~ 249 (427)
T PRK09268 170 GEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSLEKLAKLKPVFG 249 (427)
T ss_pred cccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCHHHHhCCCcccc
Confidence 011 0 0 0 0001222 1
Q ss_pred C-------CCCCcccccceEEEEEccchhhhhCCCceEEEE-EEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Q psy11396 340 Q-------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCII-KGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPN 411 (829)
Q Consensus 340 ~-------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I-~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~ 411 (829)
. ..+.+.++|||+++||.+++.|++.+.++.++| .+.....+..... .....+...+++++|++||++|+
T Consensus 250 p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~~--~~~~~~~~~a~~~a~~~AGl~~~ 327 (427)
T PRK09268 250 KGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGK--EGLLMAPAYAVPRLLARNGLTLQ 327 (427)
T ss_pred cCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCccccc--chhhccHHHHHHHHHHHcCCCHH
Confidence 1 112356799999999999999999888887776 5555555532110 00112445699999999999999
Q ss_pred CccEEEecCCCCCCCChHHHHHHHHH-hcccCC-------CCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 412 DIQLLEAHGTGTKLGDPIEFEALCES-FNKFSY-------HKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 412 dId~ve~hgtgt~~gD~~E~~Al~~~-~~~~~~-------~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
|||++|.|.+++.. -..|...+... |..... .....||+...+.+ |||.||+|+..++.++++|+.+
T Consensus 328 Did~~Ei~d~Fa~~-~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e~~~QL~~~-- 404 (427)
T PRK09268 328 DFDFYEIHEAFASQ-VLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAEK-- 404 (427)
T ss_pred HCCEEEeccccHHH-HHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHHHHHHHHhc--
Confidence 99999999877643 11222222111 110000 01146777777766 9999999999999999999761
Q ss_pred CCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 482 PPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 482 pp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
..++++++..+-||.-.++|||.
T Consensus 405 ----------------------------------~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 405 ----------------------------------GSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred ----------------------------------CCCEEEEEEcccCchheEEEEeC
Confidence 23578999999999999999983
No 172
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.80 E-value=9.8e-19 Score=195.39 Aligned_cols=224 Identities=15% Similarity=0.199 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceee
Q psy11396 201 PQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAI 280 (829)
Q Consensus 201 ~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv 280 (829)
....|+.+|+++||++||+++++++ .+++++...++. ....+..++..+|+++|++++
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id----~li~~~~~~~~~------------------~p~~a~~v~~~Lgl~~~~~~v 151 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDID----AVIVACSNMQRA------------------YPAMAIEIQQALGIEGFAFDM 151 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------CcHHHHHHHHhcCCCCcEEEe
Confidence 4467999999999999999999988 778876532221 112356788999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK 360 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~ 360 (829)
+.+|+|++.||..|+++|++|.+|.+||+|+|.+.... -|+....++++||||+|+||++.+
T Consensus 152 ~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------~~~d~~~~~lfGDgAaA~vL~~~~ 213 (372)
T PRK07515 152 NVACSSATFGIQTAANAIRSGSARRVLVVNPEICSGHL------------------NFRDRDSHFIFGDVATAVIVERAD 213 (372)
T ss_pred cchhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccccc------------------cccCCCCCEEecCccEEEEEeecc
Confidence 99999999999999999999999999999999853211 122234679999999999999876
Q ss_pred hhhhCC-CceEEEEEEe------------eeecCCCCCCCCCC----CHH--------HHHHHHHHHHHHcCCCCCCccE
Q psy11396 361 DAKKDG-DDIYCIIKGW------------GVNQDGKTNGITAP----NTK--------SQIRLQTKIYKKFNINPNDIQL 415 (829)
Q Consensus 361 ~A~~~g-~~i~a~I~g~------------~~~~dg~~~~~~~p----~~~--------~~~~ai~~Al~~Agl~~~dId~ 415 (829)
.+..++ ..+++..... ....+..+.....+ ++. ...++++++|+++|++++||||
T Consensus 214 ~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~ 293 (372)
T PRK07515 214 TATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKR 293 (372)
T ss_pred ccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 654322 2455543211 00001110000000 222 2578999999999999999999
Q ss_pred EEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHH
Q psy11396 416 LEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471 (829)
Q Consensus 416 ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~ 471 (829)
|.+|.+++...|.+ +.++|+-.... ...+. .-..+||+.+|+=...|..
T Consensus 294 ~~~Hq~~~~~~d~~----~~~llg~~~~~-~~~~~--~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 294 FWLHQANINMNQLI----GKKVLGRDATP-EEAPV--ILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred EEECCCCHHHHHHH----HHHhccCCCCh-hhceE--eHHhcCCchhhHHHHHHHH
Confidence 99999999987765 33445521111 11121 2356799999986554443
No 173
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.79 E-value=8.2e-18 Score=184.73 Aligned_cols=260 Identities=17% Similarity=0.163 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Ccceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~tv 280 (829)
..|+..+.++++ +|++ ++++ .||+|...+. . ..++..++...|+. -|+++|
T Consensus 26 ~~L~~~a~~~~~--~gi~-~~Id----~vi~G~~~~~-------------------~-~~~~r~~~~~~Gl~~~~p~~tV 78 (361)
T PRK06690 26 QQLAAPLLTFLS--KGME-REID----DVILGNVVGP-------------------G-GNVARLSALEAGLGLHIPGVTI 78 (361)
T ss_pred HHHHHHHHHHHH--ccch-hhcC----EEEEEecCCC-------------------c-chHHHHHHHHcCCCCCCCceeh
Confidence 567788888874 4886 7888 7888744211 0 12233467778885 499999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH--H------------------HHHHcCCC----------C
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH--I------------------KMSKSGML----------S 330 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~--~------------------~~~~~g~l----------s 330 (829)
+++|+||+.|+..|+++|++|++|++||||+|.++..... . ...+.|.. +
T Consensus 79 ~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s 158 (361)
T PRK06690 79 DRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLS 158 (361)
T ss_pred hhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999988642110 0 00000000 0
Q ss_pred --------CCCC---------------C--------------CCCCC-----CCCCcccccceEEEEEccchhhhhCCCc
Q psy11396 331 --------PDGH---------------C--------------YSFDQ-----RANGFVPGEGVGVLMLKKLKDAKKDGDD 368 (829)
Q Consensus 331 --------~~~~---------------~--------------~pfd~-----~~~G~~~gEGaaalvL~~~~~A~~~g~~ 368 (829)
..+. . ..|+. ..+...++|||+++||.+++.|++.|.+
T Consensus 159 ~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~ 238 (361)
T PRK06690 159 YKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYK 238 (361)
T ss_pred HHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCC
Confidence 0000 0 11211 1223557999999999999999999999
Q ss_pred eEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcc
Q psy11396 369 IYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFC 448 (829)
Q Consensus 369 i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~ 448 (829)
+.++|.|++....... . ...+...+++++|+++|++|+|||++|.|.+.+.. +...+. .++ ....++
T Consensus 239 p~~~i~~~~~~~~~~~--~---~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~----~~~~~e-~lg---l~~~~v 305 (361)
T PRK06690 239 PVLRFVRSAVVGVDPN--L---PGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASK----VVACAK-ELQ---IPYEKL 305 (361)
T ss_pred ceEEEEEEEEeccCcc--c---chhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHH----HHHHHH-hcC---CCchhc
Confidence 9889999887643221 1 13466789999999999999999999999544422 222222 222 112234
Q ss_pred ccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCC
Q psy11396 449 ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFS 528 (829)
Q Consensus 449 ~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~g 528 (829)
.++...-.+||+.|++|+.+++.++.+|++. ..++.+++...-|
T Consensus 306 n~~GG~la~Ghp~GatG~~~~~~~~~ql~~~------------------------------------~~~~g~~~~c~~g 349 (361)
T PRK06690 306 NVNGGAIALGHPYGASGAMLVTRLFYQAKRE------------------------------------DMKYGIATLGIGG 349 (361)
T ss_pred ccCCcHHhccCchhhhHHHHHHHHHHHHHHh------------------------------------CCCEEEEEEcccC
Confidence 4444444569999999999999999999651 1356778888888
Q ss_pred CceEEEEeee
Q psy11396 529 GTNAHIVLME 538 (829)
Q Consensus 529 G~na~~vl~e 538 (829)
|.-.++|||.
T Consensus 350 G~g~a~~~e~ 359 (361)
T PRK06690 350 GIGLALLFEK 359 (361)
T ss_pred cceeEEEEEe
Confidence 9899999985
No 174
>KOG1390|consensus
Probab=99.79 E-value=2.3e-19 Score=182.19 Aligned_cols=239 Identities=18% Similarity=0.250 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t 279 (829)
.++|+-.+.+.||+++.+++.+++..-.|.++.... ...++.+.+..-|| .-|++|
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~Anl----------------------GQapaRQaalgAGlp~sv~~tT 87 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANL----------------------GQAPARQAALGAGLPYSVPATT 87 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhcccccccc----------------------CcchHHHHHhhcCCCcceeeEe
Confidence 567888999999999999988877444444443322 23345566666666 469999
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCC-------------------------------
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGM------------------------------- 328 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~------------------------------- 328 (829)
|+--|+||+.|+.+|++.|+.|..|++++||.|+|+..+. ....+.+.
T Consensus 88 vNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~-~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~~aE~ 166 (396)
T KOG1390|consen 88 VNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPY-LYVARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGICAEN 166 (396)
T ss_pred ehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcc-hhhhccCcCcCCeeeeechhhcchHHHhccCCcchhHhh
Confidence 9999999999999999999999999999999999987652 11111111
Q ss_pred -------------------------------CC------------------CCC-C-----------CC-CCCC------
Q psy11396 329 -------------------------------LS------------------PDG-H-----------CY-SFDQ------ 340 (829)
Q Consensus 329 -------------------------------ls------------------~~~-~-----------~~-pfd~------ 340 (829)
+. .+. . .+ -|-.
T Consensus 167 ~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~vF~~~ggTVT 246 (396)
T KOG1390|consen 167 TAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPVFKEDGGTVT 246 (396)
T ss_pred hHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccceeecCCCeec
Confidence 00 000 0 00 0100
Q ss_pred CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396 341 RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHG 420 (829)
Q Consensus 341 ~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hg 420 (829)
..+-..+.|||+|+||.+.+.+.+.|.+|+|+|.+|+-.......-...| .-++.++|++||+..+||||+|.+
T Consensus 247 aaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~iaP-----~laipk~lk~aG~~~sdVd~~EiN- 320 (396)
T KOG1390|consen 247 AANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIAP-----ALAIPKALKKAGLEQSDVDYWEIN- 320 (396)
T ss_pred cccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccch-----HHHHHHHHHHcCcchhhhhHHhhh-
Confidence 11224579999999999999999999999999999986543332222333 458999999999999999999988
Q ss_pred CCCCCCChHHHHHHHHHhc--ccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhc
Q psy11396 421 TGTKLGDPIEFEALCESFN--KFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKH 478 (829)
Q Consensus 421 tgt~~gD~~E~~Al~~~~~--~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~ 478 (829)
|+.+...+.. ........+.+..---.+|||+|+||+.-++..++.|+.
T Consensus 321 ---------EAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 321 ---------EAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred ---------hhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 6554432211 112223345555555568999999999999999999977
No 175
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.75 E-value=5.9e-17 Score=178.29 Aligned_cols=246 Identities=15% Similarity=0.180 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC---cce
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG---PCL 278 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G---p~~ 278 (829)
...|+.+|+++||+++|+++++++ .+++++..+++ .....+.+|+..+|+++ |++
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~~~~~~~------------------~~p~~a~~v~~~lgl~~~~~~~~ 109 (329)
T PRK07204 52 SSYMGAEAAKKAVEDAKLTLDDID----CIICASGTIQQ------------------AIPCTASLIQEQLGLQHSGIPCF 109 (329)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCC------------------CCccHHHHHHHHhCCCCCCceEE
Confidence 467999999999999999999998 67777654332 11245678999999974 889
Q ss_pred eeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEcc
Q psy11396 279 AIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKK 358 (829)
Q Consensus 279 tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~ 358 (829)
.|+.+|+|++.||..|.++|++|.++.+||+++|.+.... .++....++++||||+|+||++
T Consensus 110 ~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~~------------------~~~~~~~~~lfGDGAaA~ll~~ 171 (329)
T PRK07204 110 DINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGL------------------NWGQNESCILFGDGAAAVVITK 171 (329)
T ss_pred EccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCCC------------------CcccCcceEEEecccEEEEEEE
Confidence 9999999999999999999999999999999999753211 1223345788999999999997
Q ss_pred chhhhhCCCceE-------------EEEEEeeeecCCCCCCC-------CCCCH--------HHHHHHHHHHHHHcCCCC
Q psy11396 359 LKDAKKDGDDIY-------------CIIKGWGVNQDGKTNGI-------TAPNT--------KSQIRLQTKIYKKFNINP 410 (829)
Q Consensus 359 ~~~A~~~g~~i~-------------a~I~g~~~~~dg~~~~~-------~~p~~--------~~~~~ai~~Al~~Agl~~ 410 (829)
.+.. .++. ..+.+.+...+...... ...++ ....++++++|+++|+++
T Consensus 172 ~~~~----~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~ 247 (329)
T PRK07204 172 GDHS----SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTL 247 (329)
T ss_pred cCCC----CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 5432 1222 22222222111100000 00011 124588999999999999
Q ss_pred CCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy11396 411 NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNIL 490 (829)
Q Consensus 411 ~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~ 490 (829)
+|||++.+|..+... .+++.+.++-. .+. +......+||+.+|+=...|..+ ++.+.+.
T Consensus 248 ~did~~~~H~~~~~~-----~~~i~~~l~l~---~e~--~~~~~~~~Gn~~sas~~~~L~~~---~~~g~~~-------- 306 (329)
T PRK07204 248 ADIDLIVPHQASGPA-----MRLIRKKLGVD---EER--FVTIFEDHGNMIAASIPVALFEA---IKQKKVQ-------- 306 (329)
T ss_pred HHCCEEEeCCCCHHH-----HHHHHHHcCCC---HHH--hhhhHhhhCcHHHHHHHHHHHHH---HHcCCCC--------
Confidence 999999999887654 44566666531 111 23456678999988866666544 3333221
Q ss_pred CccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 491 NEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 491 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
+..+++..+||.|-+-++++|+
T Consensus 307 -------------------------~Gd~vll~~~G~G~s~~~~ll~ 328 (329)
T PRK07204 307 -------------------------RGNKILLLGTSAGLSIGGILLE 328 (329)
T ss_pred -------------------------CCCEEEEEEEchhhhheeeEEe
Confidence 2356889999999999888886
No 176
>KOG1406|consensus
Probab=99.75 E-value=2.6e-18 Score=169.89 Aligned_cols=248 Identities=19% Similarity=0.235 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceeeccc
Q psy11396 205 LFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAIDTA 283 (829)
Q Consensus 205 l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv~~a 283 (829)
++.+|...||+|+|+...+++...+|.++|.+ ....|.-|.+|++| |.+.|++.
T Consensus 32 ~a~ea~tkal~da~ikys~vqqa~vgyvfgds-------------------------tcgqraiyevgmtgipi~nvnnn 86 (408)
T KOG1406|consen 32 FAKEAITKALQDAGIKYSEVQQAVVGYVFGDS-------------------------TCGQRAIYEVGMTGIPIYNVNNN 86 (408)
T ss_pred HHHHHHHHHHHhcCCCHHHHHhhhheeeecCC-------------------------ccchHHHHhccccCcceeeccCc
Confidence 56789999999999999999988889888843 33446667899999 99999999
Q ss_pred hhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHH------------------------------H--------HHHH
Q psy11396 284 CSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIH------------------------------I--------KMSK 325 (829)
Q Consensus 284 csSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~------------------------------~--------~~~~ 325 (829)
|++|..||.+|.+.|++|.+|++|+.|.|.|..-... . .+.+
T Consensus 87 catgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmfgnagkehmek 166 (408)
T KOG1406|consen 87 CATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMFGNAGKEHMEK 166 (408)
T ss_pred cccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHhhhhHHHHHHH
Confidence 9999999999999999999999999999976421000 0 0000
Q ss_pred cCCC-----------CCCCCCCCCCCCCCC---------------------cccccceEEEEEccchhhhhCCCceEE-E
Q psy11396 326 SGML-----------SPDGHCYSFDQRANG---------------------FVPGEGVGVLMLKKLKDAKKDGDDIYC-I 372 (829)
Q Consensus 326 ~g~l-----------s~~~~~~pfd~~~~G---------------------~~~gEGaaalvL~~~~~A~~~g~~i~a-~ 372 (829)
.|.- ..+....||++-++- +..+||+++.+|.++...++.|..-.| +
T Consensus 167 ygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv~k~gl~~qave 246 (408)
T KOG1406|consen 167 YGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVE 246 (408)
T ss_pred hCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHH
Confidence 0000 011223455443332 456999999999999988888866555 4
Q ss_pred EEEeeeecCCCCCC-----CCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcc-------
Q psy11396 373 IKGWGVNQDGKTNG-----ITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNK------- 440 (829)
Q Consensus 373 I~g~~~~~dg~~~~-----~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~------- 440 (829)
|.|..+.+|..+.- +-....+....+.++.+++.|++|.||++||.|++..+ ++.+-.+||.-+-.+
T Consensus 247 ivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcfs~-nelityealglcpegqg~~~vd 325 (408)
T KOG1406|consen 247 IVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSA-NELITYEALGLCPEGQGGEFVD 325 (408)
T ss_pred HHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecccch-hhhhhHHHhcCCCCCCCceeee
Confidence 78877777754321 11122456678899999999999999999999999875 455555565322110
Q ss_pred --cCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhc
Q psy11396 441 --FSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKH 478 (829)
Q Consensus 441 --~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~ 478 (829)
...-.+.+.|+...++| |||+||+|+++.++...+||.
T Consensus 326 rgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg 367 (408)
T KOG1406|consen 326 RGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRG 367 (408)
T ss_pred cCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhh
Confidence 11122345566666665 999999999999999999986
No 177
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=99.73 E-value=1.1e-16 Score=170.75 Aligned_cols=289 Identities=18% Similarity=0.280 Sum_probs=192.1
Q ss_pred CEEEEecccccCC-CCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCCCCHH
Q psy11396 116 DIAIIGISGQFPK-ANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFNISPS 194 (829)
Q Consensus 116 ~IaItG~g~~~p~-g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~i~p~ 194 (829)
.+.|+|+|...|. ..+.+++-..+.....+|..... |-++
T Consensus 3 ~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtG---------------------------------------ir~R 43 (323)
T COG0332 3 NAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTG---------------------------------------IRER 43 (323)
T ss_pred cceEEEEEeecCCcccChHHHHhccCCCcceeeeecC---------------------------------------Ccee
Confidence 5689999999999 56777776444444333333221 1111
Q ss_pred Hhhc-CCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC
Q psy11396 195 EAEY-MDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL 273 (829)
Q Consensus 195 ~~~~-~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl 273 (829)
.... -.....|+.+|+++||++||+++++|+ .+++.+..+++. .+..|..|...||+
T Consensus 44 ~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dID----lII~aT~tpd~~------------------~Ps~A~~vq~~LG~ 101 (323)
T COG0332 44 RIAADDETTSDLAVEAARKALEDAGISPDDID----LIIVATSTPDHL------------------FPSTACLVQARLGL 101 (323)
T ss_pred eecCCCccHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCcccC------------------CChHHHHHHHHhCC
Confidence 1111 223567999999999999999999999 899998876652 34568899999999
Q ss_pred CC-cceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceE
Q psy11396 274 QG-PCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG 352 (829)
Q Consensus 274 ~G-p~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaa 352 (829)
++ +.+.++++|++.++||..|..+|++|.++.+||+|.|.++... -|+.+...+.+||||+
T Consensus 102 ~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~l------------------d~~dR~t~vlFgDGAg 163 (323)
T COG0332 102 GGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRIL------------------DWTDRDTCVLFGDGAG 163 (323)
T ss_pred CCcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccC------------------CHhhccceEEEcCCce
Confidence 87 9999999999999999999999999999999999999863211 1334457788999999
Q ss_pred EEEEccchhhhhCCCceEEEEEEeeeecCCCCC-------------------CCCCCC--------HHHHHHHHHHHHHH
Q psy11396 353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTN-------------------GITAPN--------TKSQIRLQTKIYKK 405 (829)
Q Consensus 353 alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~-------------------~~~~p~--------~~~~~~ai~~Al~~ 405 (829)
|+||++.+ .+.| |..+...+||... ....-. ...+.++++++|++
T Consensus 164 Avvl~~~~--~~~~------i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~ 235 (323)
T COG0332 164 AVVLEATE--DDNG------ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEK 235 (323)
T ss_pred EEEEecCC--CCcC------eeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999876 1122 2222222232110 000011 23457899999999
Q ss_pred cCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCC
Q psy11396 406 FNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTI 485 (829)
Q Consensus 406 Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~ 485 (829)
++++++|||++..|=.. .-=.+++.+.++- +.++..+ .-...|++.+||=...|.++ ++.|.|.|
T Consensus 236 ~~l~~~dId~~vpHQan-----~ri~~~i~~~l~~---~~~k~~~--~~~~yGNtsaAsiplaL~~~---~~~g~ik~-- 300 (323)
T COG0332 236 AGLTPEDIDWFVPHQAN-----LRIIEAIAKKLGI---PEEKVVV--TVDKYGNTSAASIPLALDEA---LREGRIKP-- 300 (323)
T ss_pred cCCCHHHCCEEcccccc-----HHHHHHHHHHcCC---CHHHHhh--HHHHhcccccchHHHHHHHH---hhhCCCCC--
Confidence 99999999999999222 1223344444442 1222222 22235888888755555543 34443321
Q ss_pred CCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 486 NYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 486 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
..+.++.+||-|=+-.+++++
T Consensus 301 -------------------------------Gd~ill~~fG~Gltwg~~~~r 321 (323)
T COG0332 301 -------------------------------GDLVLLEAFGGGLTWGAALVR 321 (323)
T ss_pred -------------------------------CCEEEEEeecCcceeeeEEEE
Confidence 245778888876666666654
No 178
>PRK07855 lipid-transfer protein; Provisional
Probab=99.73 E-value=3e-16 Score=175.02 Aligned_cols=242 Identities=12% Similarity=0.084 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--cceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~tv 280 (829)
..|+.+|+++||+|||+++++|+ +++++... . .. ...++..+|+++ |...|
T Consensus 25 ~~L~~eA~~~Al~DAgl~~~dID----~~~~~~~~--~------------------~~---~~~l~~~lGl~~~~~~~~v 77 (386)
T PRK07855 25 LRLACEAVLAALDDAGLAPSDVD----GLVTFTMD--T------------------NP---EIAVARALGIGELKFFSRI 77 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEecCc--c------------------cc---HHHHHHHCCCCCCcceeee
Confidence 45899999999999999999998 66653210 0 00 134888899976 44578
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEecc--ccccChH------------H---HHHHHH-cCCCC------------
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGV--YIINTPD------------I---HIKMSK-SGMLS------------ 330 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~--e~~~~~~------------~---~~~~~~-~g~ls------------ 330 (829)
..+|+|+..+|..|++.|++|.||+|||.|+ +...... . ...+.. .|...
T Consensus 78 ~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~y 157 (386)
T PRK07855 78 HYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAAWVAMLARRY 157 (386)
T ss_pred cCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999988 2210000 0 000000 11100
Q ss_pred -------------------CCCCCCCCCCC----------------------CCCcccccceEEEEEccchhhhhCCCce
Q psy11396 331 -------------------PDGHCYSFDQR----------------------ANGFVPGEGVGVLMLKKLKDAKKDGDDI 369 (829)
Q Consensus 331 -------------------~~~~~~pfd~~----------------------~~G~~~gEGaaalvL~~~~~A~~~g~~i 369 (829)
......|+... -+.+.++|||+++||.+++.|++.+.++
T Consensus 158 m~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~see~A~~l~~~p 237 (386)
T PRK07855 158 MHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSAERARDLKQRP 237 (386)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecHHHHhhCCCCC
Confidence 00111122111 3446679999999999999999887666
Q ss_pred EEEEEEeeeecCCCCCCC-----CC-CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHH------
Q psy11396 370 YCIIKGWGVNQDGKTNGI-----TA-PNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCES------ 437 (829)
Q Consensus 370 ~a~I~g~~~~~dg~~~~~-----~~-p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~------ 437 (829)
.+|+|++..++...... .. ........++++||++||++|+|||++|.|.++|.. |...+...
T Consensus 238 -v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~~----~l~~~E~lG~~~~G 312 (386)
T PRK07855 238 -AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTPF----VLMQLEELGFCGRG 312 (386)
T ss_pred -EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcHH----HHHHHHHcCCCCCC
Confidence 48999987654331110 01 112344579999999999999999999999998864 44443322
Q ss_pred -----h-cccCCCCCccccCCcccCc--CcchhhhhHHHHHHHHHHHhcC
Q psy11396 438 -----F-NKFSYHKNFCALGSVKSNI--GHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 438 -----~-~~~~~~~~~~~v~s~k~~~--GH~~gAsG~~~li~~~l~L~~~ 479 (829)
+ .+.....+.+||+...+.+ ||+. |+.+++++++||+..
T Consensus 313 e~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~QLrG~ 359 (386)
T PRK07855 313 EAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVRQLRGT 359 (386)
T ss_pred cHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHHHHhCC
Confidence 1 1122334568896666655 7876 899999999999984
No 179
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=99.73 E-value=3.2e-16 Score=179.62 Aligned_cols=271 Identities=13% Similarity=0.064 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHHHcCCC--CCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-ccee
Q psy11396 203 QRLFLQNCWTCIEDAGYN--PFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLA 279 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~--~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~t 279 (829)
..|+.+|+++||+|||++ +.+|+ +++++.... + .....+..++..+|+.. +...
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID----~v~v~~~~~-~------------------~~~~~~~~la~~lGl~p~~~~~ 84 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAID----SVAVVNQLS-W------------------RYRDPPGLLAERLGADPARTVY 84 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCC----EEEEecccc-c------------------cccCHHHHHHHHcCCCCcceeE
Confidence 568999999999999999 88998 777763321 0 01223467888999964 4445
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH----------------------------HHH-HcCCCC
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI----------------------------KMS-KSGMLS 330 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~----------------------------~~~-~~g~ls 330 (829)
...+|+|+..+|..|+++|++|+||+|||+|+|.+.+..... .+. ..|...
T Consensus 85 ~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~ 164 (498)
T PRK08257 85 SPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDR 164 (498)
T ss_pred ecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCC
Confidence 667888999999999999999999999999999754221000 000 011110
Q ss_pred -----------------------------------------CCC-CCCCCCCC------------------CCCc-cccc
Q psy11396 331 -----------------------------------------PDG-HCYSFDQR------------------ANGF-VPGE 349 (829)
Q Consensus 331 -----------------------------------------~~~-~~~pfd~~------------------~~G~-~~gE 349 (829)
|.. ..+|++.+ -+.. ...|
T Consensus 165 p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~D 244 (498)
T PRK08257 165 PVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVD 244 (498)
T ss_pred cchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCcc
Confidence 000 00111100 1112 3699
Q ss_pred ceEEEEEccchhhhhCCC--ceEEEEEEeeeecCCCCCC-CC-CCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy11396 350 GVGVLMLKKLKDAKKDGD--DIYCIIKGWGVNQDGKTNG-IT-APNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKL 425 (829)
Q Consensus 350 GaaalvL~~~~~A~~~g~--~i~a~I~g~~~~~dg~~~~-~~-~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~ 425 (829)
|++++||.+++.|++.+. .....|.|++..++..... .. .........+.++||++||++++|||++|.|.+++..
T Consensus 245 GaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~~ 324 (498)
T PRK08257 245 QGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPSA 324 (498)
T ss_pred cceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHHH
Confidence 999999999999998873 2346789998887753221 11 1123345579999999999999999999999998754
Q ss_pred CChHHHHHHHHH-hcccCCCCCccccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCee
Q psy11396 426 GDPIEFEALCES-FNKFSYHKNFCALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFF 502 (829)
Q Consensus 426 gD~~E~~Al~~~-~~~~~~~~~~~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~ 502 (829)
|..++..+ |.. .+..|++...++ .||+.+++|+.++++++.+|+.+
T Consensus 325 ----~~~~~E~LGl~~----~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~----------------------- 373 (498)
T PRK08257 325 ----VQVAARELGLDL----DDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN----------------------- 373 (498)
T ss_pred ----HHHHHHHcCcCC----CCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc-----------------------
Confidence 65555544 222 123566555555 49999999999999999999863
Q ss_pred eccccccccccccCccEEEEeccC-CCCceEEEEeeecc
Q psy11396 503 INTKCKSWDIKNKKKRMAAINSFG-FSGTNAHIVLMEKI 540 (829)
Q Consensus 503 v~~~~~~~~~~~~~~~~a~v~s~G-~gG~na~~vl~e~~ 540 (829)
..+++++.+.| ++..++..|++..|
T Consensus 374 -------------~~~~gLv~~~GG~~~~~~~~vl~~~p 399 (498)
T PRK08257 374 -------------PGRRGLVTANGGYLTKHSVGVYSTEP 399 (498)
T ss_pred -------------CCCEEEEECCCChhhceEEEEEeCCC
Confidence 12468888876 55556666776543
No 180
>PRK07937 lipid-transfer protein; Provisional
Probab=99.72 E-value=4.4e-16 Score=170.89 Aligned_cols=239 Identities=12% Similarity=0.048 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-C-cceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-G-PCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-G-p~~tv 280 (829)
..|+.+|+++||+|||+++++|+ +++.+.. ++. .+.... ...++..+|+. + |...+
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID----~~~~~~~--~~~--------------~~~~~~--~~~~~~~~G~~~~~~~~~v 82 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIG----FWCSGSS--DYL--------------AGRAFS--FISAIDSIGAVPPINESHV 82 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEcc--ccc--------------cccccc--hhhHHhhccCCCCCceEEe
Confidence 56999999999999999999998 5544321 110 000000 11234456663 2 34445
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHH----------------------HH------HHHHcCCCC--
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDI----------------------HI------KMSKSGMLS-- 330 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~----------------------~~------~~~~~g~ls-- 330 (829)
. ++|..||..|+.+|++|.||++||.|+|.+..... +. ++.+.|...
T Consensus 83 ~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~ 159 (352)
T PRK07937 83 E---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQ 159 (352)
T ss_pred c---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHH
Confidence 4 46888999999999999999999999986531000 00 000001000
Q ss_pred ---------CCCCCCCCCC-------------------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCC
Q psy11396 331 ---------PDGHCYSFDQ-------------------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDG 382 (829)
Q Consensus 331 ---------~~~~~~pfd~-------------------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg 382 (829)
......|+.. ..+.+.++|||+++||.+.+.|++.+.++ +.|.|++...+.
T Consensus 160 lA~vavk~r~nA~~NP~A~~rit~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~ 238 (352)
T PRK07937 160 MAEVAARSRADARRNPSAEPSISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERP-AWITGIEHRIES 238 (352)
T ss_pred HHHHHHHHHHHHhhCchhhccCCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCC
Confidence 0011122111 12445689999999999999999988777 899999887665
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCc-Ccc
Q psy11396 383 KTNGITAPNTKSQIRLQTKIYKK-FNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNI-GHS 460 (829)
Q Consensus 383 ~~~~~~~p~~~~~~~ai~~Al~~-Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~-GH~ 460 (829)
........ ....++++++++ ||++|+|||++|.|.+++.. |...+... +- .+.+||+...+.+ ||+
T Consensus 239 ~~~~~~d~---~~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~~----~l~~~e~l-Gl----~g~~pvN~~GG~l~ghp 306 (352)
T PRK07937 239 PSLGARDL---TRSPSTALAAEAATGGDAGGVDVAELHAPFTHQ----ELILREAL-GL----GDKTKVNPSGGALAANP 306 (352)
T ss_pred cccccccc---ccHHHHHHHHHHhcCCCHHHCCEEEEeCCChHH----HHHHHHHc-CC----CCCCCcCCCccchhcCc
Confidence 43211111 112344556666 59999999999999888754 55544432 21 1235665555543 999
Q ss_pred hhhhhHHHHHHHHHHHhcC
Q psy11396 461 ATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 461 ~gAsG~~~li~~~l~L~~~ 479 (829)
.||+|+.+++++++||+.+
T Consensus 307 ~gatG~~~~~e~~~QL~g~ 325 (352)
T PRK07937 307 MFAAGLERIGEAARHIWDG 325 (352)
T ss_pred hhHHHHHHHHHHHHHHhcc
Confidence 9999999999999999874
No 181
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.72 E-value=2.5e-16 Score=172.69 Aligned_cols=241 Identities=17% Similarity=0.262 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv 280 (829)
...|+.+|+++||+++|+++++++ .+++|+...++. ....+.+|+..+|+.+ |.++|
T Consensus 52 ~~~la~~A~~~al~~agl~~~~id----~vi~~~~~~~~~------------------~~~~~~~i~~~lG~~~~~~~~v 109 (319)
T PRK09352 52 TSDLATEAAKKALEAAGIDPEDID----LIIVATTTPDYA------------------FPSTACLVQARLGAKNAAAFDL 109 (319)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CchHHHHHHHHhCCCCCcEeec
Confidence 578999999999999999999988 788886543221 1124678999999987 88999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK 360 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~ 360 (829)
+.+|+|++.||..|+++|++|.+|.+||+|+|.+.... .++....++++||||+|+||++.+
T Consensus 110 ~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------~~~~~~~~~~~gDGaaA~ll~~~~ 171 (319)
T PRK09352 110 SAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIV------------------DWTDRSTCVLFGDGAGAVVLGASE 171 (319)
T ss_pred cccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc------------------CcccCCceEEEeccceEEEEEEcC
Confidence 99999999999999999999999999999999854211 011223467899999999999865
Q ss_pred hhhhCCCceEEEEEEeeeecCCCCC--------CCCCC--------C--------HHHHHHHHHHHHHHcCCCCCCccEE
Q psy11396 361 DAKKDGDDIYCIIKGWGVNQDGKTN--------GITAP--------N--------TKSQIRLQTKIYKKFNINPNDIQLL 416 (829)
Q Consensus 361 ~A~~~g~~i~a~I~g~~~~~dg~~~--------~~~~p--------~--------~~~~~~ai~~Al~~Agl~~~dId~v 416 (829)
.. . +.++...+++... ....| . .....++++++|+++|++++||+|+
T Consensus 172 ~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~ 242 (319)
T PRK09352 172 EP-----G----ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPEDIDWL 242 (319)
T ss_pred CC-----C----eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 42 1 2222222222110 00000 0 1234568999999999999999999
Q ss_pred EecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCc
Q psy11396 417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKL 496 (829)
Q Consensus 417 e~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~ 496 (829)
.+|..+... ...+.+.++- ..+.+ ...-..+||+.+|+-.+.|..++ +.|.+.
T Consensus 243 ~~h~~~~~~-----~~~~~~~lg~---~~~~~--~~~~~~~Gn~~~a~~~~~L~~~~---~~g~~~-------------- 295 (319)
T PRK09352 243 VPHQANLRI-----IDATAKKLGL---PMEKV--VVTVDKYGNTSAASIPLALDEAV---RDGRIK-------------- 295 (319)
T ss_pred EECCCCHHH-----HHHHHHHhCC---CHHHh--hhhHHhhCCHHHHHHHHHHHHHH---HcCCCC--------------
Confidence 999654332 2334444432 11112 22345689999999887776554 333221
Q ss_pred CCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 497 ENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 497 ~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
...+.++-|||.|-+-.+++|+
T Consensus 296 -------------------~Gd~vll~s~G~G~~~~~~ll~ 317 (319)
T PRK09352 296 -------------------RGDLVLLEGFGGGLTWGAALVR 317 (319)
T ss_pred -------------------CCCEEEEEEEchhheeEEEEEE
Confidence 1346889999999888888886
No 182
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.69 E-value=9.7e-16 Score=167.90 Aligned_cols=242 Identities=17% Similarity=0.278 Sum_probs=165.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv 280 (829)
...|+.+|+++||+++|+++++++ .+++++...++. ....+.+++..+|+++ |++.|
T Consensus 51 ~~~la~~A~~~al~~agl~~~~Id----~~i~~~~~~~~~------------------~~~~a~~l~~~lGl~~~~~~~v 108 (318)
T TIGR00747 51 SSTMGFEAAKRAIENAGISKDDID----LIIVATTTPDHA------------------FPSAACMVQAYLGIKGIPAFDL 108 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------CChHHHHHHHHhCCCCCcEeeh
Confidence 467899999999999999999988 788876543321 1124578999999988 89999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK 360 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~ 360 (829)
+.+|+|++.||..|+++|++|.++.+||+|+|.+.... .+. .....+++||||+|+||++.+
T Consensus 109 ~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~-----------------~~~-~~~~~~~~GDGAaA~lL~~~~ 170 (318)
T TIGR00747 109 SAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTL-----------------DWT-DRGTCVLFGDGAGAVVLGESE 170 (318)
T ss_pred hhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC-----------------CcC-CCCeEEEEecceeEEEEeecC
Confidence 99999999999999999999999999999999854321 111 122356789999999998765
Q ss_pred hhhhCCCceEEEEEEeeeecCCCCC-CC---------CCC-------C-------HHHHHHHHHHHHHHcCCCCCCccEE
Q psy11396 361 DAKKDGDDIYCIIKGWGVNQDGKTN-GI---------TAP-------N-------TKSQIRLQTKIYKKFNINPNDIQLL 416 (829)
Q Consensus 361 ~A~~~g~~i~a~I~g~~~~~dg~~~-~~---------~~p-------~-------~~~~~~ai~~Al~~Agl~~~dId~v 416 (829)
... . |..+...+++... .. ... . .....++++++|+++|++++||+|+
T Consensus 171 ~~~----~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~~~ 242 (318)
T TIGR00747 171 DPG----G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDIDWF 242 (318)
T ss_pred CCC----c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 421 1 2222222222100 00 000 0 1234567899999999999999999
Q ss_pred EecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCc
Q psy11396 417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKL 496 (829)
Q Consensus 417 e~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~ 496 (829)
.+|..+... ...+.+.++- ..+.+. ... ..+||+.+|+=...|..++ +++.+.
T Consensus 243 ~~h~~~~~~-----~~~~~~~lgi---~~~k~~-~~~-~~~Gn~~sas~~~~L~~~~---~~~~~~-------------- 295 (318)
T TIGR00747 243 VPHQANLRI-----IEALAKRLEL---DMSQVV-KTV-HKYGNTSAASIPLALDELL---RTGRIK-------------- 295 (318)
T ss_pred EECCCCHHH-----HHHHHHHcCC---CHHHee-ehH-hhhCCHHHHHHHHHHHHHH---HcCCCC--------------
Confidence 999776543 2334444442 111222 122 3489999999777776643 333222
Q ss_pred CCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 497 ENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 497 ~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
+..++++-+||.|.+-.+++|+
T Consensus 296 -------------------~Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 296 -------------------PGDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred -------------------CCCEEEEEEEehhheeeEEEEE
Confidence 1246889999999998888886
No 183
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.66 E-value=5.1e-15 Score=162.69 Aligned_cols=247 Identities=17% Similarity=0.259 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC-Ccceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ-GPCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-Gp~~tv 280 (829)
...|+.+|+++||+++|+++++++ .+++++...++. ....+.+++..+|++ .+.+.|
T Consensus 53 ~~~la~~A~~~al~~ag~~~~~Id----~li~~~~~~~~~------------------~~~~a~~l~~~lg~~~~~~~~v 110 (325)
T PRK12879 53 TSDLAIKAAERALARAGLDAEDID----LIIVATTTPDYL------------------FPSTASQVQARLGIPNAAAFDI 110 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CChHHHHHHHHhCCCCCcEEEE
Confidence 467899999999999999999988 777776543321 123567899999997 488999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK 360 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~ 360 (829)
+.+|+|++.||..|.++|++|.++.+||+++|.+.... .++.....+++||||+|+||++.+
T Consensus 111 ~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~~------------------~~~~~~~~~~~GDgAaA~ll~~~~ 172 (325)
T PRK12879 111 NAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVT------------------DYTDRTTCILFGDGAGAVVLEATE 172 (325)
T ss_pred CccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC------------------CccccCceEEEeecceEEEEEecC
Confidence 99999999999999999999999999999999753210 111123457899999999999755
Q ss_pred hhhhCCCceEEEEE-------------EeeeecCC---CCCCCCCCC--------HHHHHHHHHHHHHHcCCCCCCccEE
Q psy11396 361 DAKKDGDDIYCIIK-------------GWGVNQDG---KTNGITAPN--------TKSQIRLQTKIYKKFNINPNDIQLL 416 (829)
Q Consensus 361 ~A~~~g~~i~a~I~-------------g~~~~~dg---~~~~~~~p~--------~~~~~~ai~~Al~~Agl~~~dId~v 416 (829)
.. ..+..... +.+...+. ......... .....++++++|+++|++++|||++
T Consensus 173 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~ 248 (325)
T PRK12879 173 NE----PGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWV 248 (325)
T ss_pred CC----CCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 31 11211111 11100000 000000001 1224568899999999999999999
Q ss_pred EecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCc
Q psy11396 417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKL 496 (829)
Q Consensus 417 e~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~ 496 (829)
.+|-.+.. -..++.+.++- ..+.+.. ....+||+.+|+-...|..+ ++.+.+.
T Consensus 249 ~~h~~~~~-----~~~~~~~~lg~---~~~~~~~--~~~~~Gn~~sas~~~~L~~~---~~~g~~~-------------- 301 (325)
T PRK12879 249 IPHQANLR-----IIESLCEKLGI---PMEKTLV--SVEYYGNTSAATIPLALDLA---LEQGKIK-------------- 301 (325)
T ss_pred EECCCCHH-----HHHHHHHHcCC---CHHHhhh--hHhhhCchHHHHHHHHHHHH---HHcCCCC--------------
Confidence 99955433 23455555542 1122222 34678999999877777654 3443221
Q ss_pred CCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 497 ENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 497 ~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
+..++++-+||.|-+-.++||+-
T Consensus 302 -------------------~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 302 -------------------PGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred -------------------CCCEEEEEEEchhhhhEEEEEEe
Confidence 12468899999999988888873
No 184
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.65 E-value=1.9e-15 Score=165.81 Aligned_cols=214 Identities=19% Similarity=0.288 Sum_probs=150.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC-CCcceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL-QGPCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl-~Gp~~tv 280 (829)
...|+.+|+++||+++|+++++++ .+++++..+++. ....+.+++..+|+ +.|++.|
T Consensus 50 ~~~la~~A~~~al~~ag~~~~~Id----~li~~~~~~~~~------------------~~~~~~~l~~~lg~~~~~~~~v 107 (320)
T cd00830 50 TSDLAVEAAKKALEDAGIDADDID----LIIVATSTPDYL------------------FPATACLVQARLGAKNAAAFDI 107 (320)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCcHHHHHHHHhCCCCCcEeec
Confidence 578999999999999999999998 777776543321 12346789999999 5688999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK 360 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~ 360 (829)
+.+|+|++.||..|+++|++|.++.+||+++|.+.... .|+....++++||||+|+||++.+
T Consensus 108 ~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------~~~~~~~~~~~GDgAaA~ll~~~~ 169 (320)
T cd00830 108 NAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL------------------DWTDRSTAVLFGDGAGAVVLEATE 169 (320)
T ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc------------------CcccCCceEEEeccceEEEEEecC
Confidence 99999999999999999999999999999999854211 133345678999999999999755
Q ss_pred hhhhCCCceEEEEEEeeeecCCCCC--------CCCCC--------------C-------HHHHHHHHHHHHHHcCCCCC
Q psy11396 361 DAKKDGDDIYCIIKGWGVNQDGKTN--------GITAP--------------N-------TKSQIRLQTKIYKKFNINPN 411 (829)
Q Consensus 361 ~A~~~g~~i~a~I~g~~~~~dg~~~--------~~~~p--------------~-------~~~~~~ai~~Al~~Agl~~~ 411 (829)
. +..+ .++...+++... +...| . .....++++++|+++|++++
T Consensus 170 ~----~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~ 241 (320)
T cd00830 170 E----DPGI----LDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPD 241 (320)
T ss_pred C----CCcE----EEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHH
Confidence 3 2223 333333332110 00000 0 12346789999999999999
Q ss_pred CccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHH
Q psy11396 412 DIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKII 473 (829)
Q Consensus 412 dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~ 473 (829)
|||++.+|..+... .+.+.+.++- ..+.+ ...-..+||+.+|+-.+.|..++
T Consensus 242 di~~~~~h~~~~~~-----~~~~~~~lgl---~~~~~--~~~~~~~Gn~~sas~~~~L~~~~ 293 (320)
T cd00830 242 DIDWFVPHQANLRI-----IEAVAKRLGL---PEEKV--VVNLDRYGNTSAASIPLALDEAI 293 (320)
T ss_pred HCCEEEECCCCHHH-----HHHHHHHhCC---CHHHh--hhhHHhhCcHHHHHHHHHHHHHH
Confidence 99999999776544 2234444442 11122 22345689999999877777653
No 185
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.65 E-value=9.8e-15 Score=163.21 Aligned_cols=240 Identities=18% Similarity=0.205 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv 280 (829)
...|+.+|+++||+++|+++++|+ .+++++..++|. .+ ..+..|...+|+++ |++.|
T Consensus 63 ~~~La~~A~~~aL~~agi~~~dId----~li~~s~~~~~~-----------------~p-~~a~~v~~~Lgl~~~~~~~v 120 (378)
T PRK06816 63 NAQMAAEAIRDLLDDAGFSLGDIE----LLACGTSQPDQL-----------------MP-GHASMVHGELGAPPIEVVSS 120 (378)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEECCCCcC-----------------Ch-HHHHHHHhhCCCCCCceeee
Confidence 568999999999999999999998 788886554321 11 22457888889865 88899
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHH-cCCCC--CCCCCCCCCCCCCCcccccceEEEEEc
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSK-SGMLS--PDGHCYSFDQRANGFVPGEGVGVLMLK 357 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~-~g~ls--~~~~~~pfd~~~~G~~~gEGaaalvL~ 357 (829)
+.+|+|++.||..|.++|++|.++.+||+|+|.++.......+.. .+.+. .+..+++|+.+..|+++||||+|+||+
T Consensus 121 ~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~ 200 (378)
T PRK06816 121 AGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLE 200 (378)
T ss_pred cCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEE
Confidence 999999999999999999999999999999999765543222221 11221 234568999999999999999999998
Q ss_pred cchhhhhCCCc--eEEEEEEee-e------------ecCCCCCCCC--C-------------CCHHH--------HHHHH
Q psy11396 358 KLKDAKKDGDD--IYCIIKGWG-V------------NQDGKTNGIT--A-------------PNTKS--------QIRLQ 399 (829)
Q Consensus 358 ~~~~A~~~g~~--i~a~I~g~~-~------------~~dg~~~~~~--~-------------p~~~~--------~~~ai 399 (829)
+.+.. .|.. +.....+.. . ..++...... . .+... ....+
T Consensus 201 ~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 278 (378)
T PRK06816 201 NKPRP--DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPL 278 (378)
T ss_pred ecCCC--CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHH
Confidence 75432 2221 110000000 0 0000000000 0 01111 26678
Q ss_pred HHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcc--cCCCCCccccCCcccCcCcchhhhhHHHHHHH
Q psy11396 400 TKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNK--FSYHKNFCALGSVKSNIGHSATAAGVIGMIKI 472 (829)
Q Consensus 400 ~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~--~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~ 472 (829)
+++|+++|++++|||++..|-...... +++.+.+.. .......++ ..-..+||+.+|+-...|..+
T Consensus 279 ~~~L~~~gl~~~DId~~v~Hq~n~~~~-----~~v~~~l~~~~~gl~~~k~~--~~~~~~GNt~sAsipi~L~~a 346 (378)
T PRK06816 279 LELVDKRNLDPDDIDYFLPHYSSEYFR-----EKIVELLAKAGFMIPEEKWF--TNLATVGNTGSASIYIMLDEL 346 (378)
T ss_pred HHHHHHcCCChhhCCEEeeCcccHHHH-----HHHHHHHHhccCCCChhheE--EeccccccccchHHHHHHHHH
Confidence 889999999999999999996554332 233333310 011111222 222367999999977777655
No 186
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.64 E-value=4.6e-15 Score=163.99 Aligned_cols=260 Identities=13% Similarity=0.141 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--ccee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t 279 (829)
...|+.+|+++||+++|+++++|+ .+++++..+++. ....+..++..+|++. +.+.
T Consensus 61 ~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~~~~------------------~p~~a~~v~~~lgl~~~~~~~~ 118 (338)
T PRK09258 61 LSDGAIAAGRKALAEAGIDPSDIG----LLINTSVCRDYL------------------EPATACRVHHNLGLPKSCANFD 118 (338)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CChHHHHHHHHcCCCCCCceee
Confidence 457999999999999999999998 777876543331 1235678999999963 7899
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL 359 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~ 359 (829)
|..+|+|++.||..|.++|++|.++.+||++.|.+..... ..+. .+..+.....+|+.....+.+||||+|+||++.
T Consensus 119 v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~ 195 (338)
T PRK09258 119 VSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVE-ATID--RLLAPETTREDFAQSFATLTLGSGAAAAVLTRG 195 (338)
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhcc-chhh--hhccCccchhhhhhccceEEecccceEEEEecC
Confidence 9999999999999999999999999999999998543211 1111 111222222456666677889999999999975
Q ss_pred hhhhhCCCceEEEEEEeeeecCCCCCCCC-------CCCH--------HHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy11396 360 KDAKKDGDDIYCIIKGWGVNQDGKTNGIT-------APNT--------KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK 424 (829)
Q Consensus 360 ~~A~~~g~~i~a~I~g~~~~~dg~~~~~~-------~p~~--------~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~ 424 (829)
+.. ..+. .+.+....+++...... ..+. ....++++++|+++|++++|||++.+|-.+.+
T Consensus 196 ~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~~ 270 (338)
T PRK09258 196 SLH-PRGH----RLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGAA 270 (338)
T ss_pred CCC-CCcc----eeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCCHH
Confidence 431 1122 23333332232211100 0111 23346888999999999999999999976655
Q ss_pred CCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeec
Q psy11396 425 LGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFIN 504 (829)
Q Consensus 425 ~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~ 504 (829)
. .+.+.+.++- ..+.++. .. ..+||+.+|+=...|..++ +.|.+.
T Consensus 271 ~-----~~~~~~~lgl---~~~k~~~-~~-~~~GN~~sas~~~~L~~~~---~~g~~~---------------------- 315 (338)
T PRK09258 271 H-----TRAILKALGI---DPEKVFT-TF-PTLGNMGPASLPITLAMAA---EEGFLK---------------------- 315 (338)
T ss_pred H-----HHHHHHHhCC---CHHHcee-hH-hhhCCcHHhHHHHHHHHHH---HhCCCC----------------------
Confidence 4 2344444442 1122222 23 3689999998666666543 333221
Q ss_pred cccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 505 TKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 505 ~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
...+++..+||.|-+...++++
T Consensus 316 -----------~Gd~vll~~~G~G~s~~~~~~~ 337 (338)
T PRK09258 316 -----------PGDRVALLGIGSGLNCSMLEVK 337 (338)
T ss_pred -----------CCCEEEEEEechhHhhHhHeee
Confidence 1246888999988766655554
No 187
>KOG1389|consensus
Probab=99.63 E-value=9.8e-16 Score=155.08 Aligned_cols=237 Identities=20% Similarity=0.268 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh-hhccC--CCcceeec
Q psy11396 205 LFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS-YFLNL--QGPCLAID 281 (829)
Q Consensus 205 l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia-~~lgl--~Gp~~tv~ 281 (829)
|...+.+..+|+-+++|..+...-+|.+++.+.+ ....|++ ++-|+ +-|..+|+
T Consensus 64 Ll~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-----------------------a~e~R~a~~~ag~P~tvpv~tvN 120 (435)
T KOG1389|consen 64 LLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-----------------------ASECRMAAFYAGFPETVPVRTVN 120 (435)
T ss_pred HHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-----------------------hHHHHHHHHHcCCCcccchhhhh
Confidence 4555678888999999988885545554443221 2233443 33455 56899999
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH--H--------HHHHHH-------cCCCC--------------
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD--I--------HIKMSK-------SGMLS-------------- 330 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~--~--------~~~~~~-------~g~ls-------------- 330 (829)
.-|+|||+|+..-+..|++|.+|.-|.+|+|+|++.+ . ...+.. +|..+
T Consensus 121 RqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eq 200 (435)
T KOG1389|consen 121 RQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQ 200 (435)
T ss_pred hhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhhh
Confidence 9999999999999999999999999999999987542 0 000000 01100
Q ss_pred ---------------------------------C-----------CCCCCC-------------CCCC-----CCCcccc
Q psy11396 331 ---------------------------------P-----------DGHCYS-------------FDQR-----ANGFVPG 348 (829)
Q Consensus 331 ---------------------------------~-----------~~~~~p-------------fd~~-----~~G~~~g 348 (829)
+ +...|| |-++ .+...++
T Consensus 201 D~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQvS 280 (435)
T KOG1389|consen 201 DEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQVS 280 (435)
T ss_pred hHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhcCCccccCchhhcc
Confidence 0 111111 1111 1224579
Q ss_pred cceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCh
Q psy11396 349 EGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDP 428 (829)
Q Consensus 349 EGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~ 428 (829)
||+++++|.+.+.|.+.|.+++++.+.+.............| ..+|.++++.+|+..+|||++|.+
T Consensus 281 DGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv~P~iMGiGP-----avAIp~alk~aGL~v~did~FEIN--------- 346 (435)
T KOG1389|consen 281 DGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGVPPAIMGIGP-----AVAIPKALKAAGLEVDDIDLFEIN--------- 346 (435)
T ss_pred cchhhhhhhhhhhHhhcCCceeEEeeeeeeecCCHHHcCCCc-----hhhhHHHHHHcCCcccccceeehh---------
Confidence 999999999999999999999999999877654433332223 668999999999999999999987
Q ss_pred HHHHHHHHHhcc--cCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcC
Q psy11396 429 IEFEALCESFNK--FSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 429 ~E~~Al~~~~~~--~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~ 479 (829)
|+.|-+.++.- .....+.+.+..-.-.+|||+||+|+..++..+.-|+++
T Consensus 347 -EAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 347 -EAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR 398 (435)
T ss_pred -HHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhh
Confidence 77666655542 222333445555555689999999999999999999873
No 188
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=99.61 E-value=2.2e-16 Score=157.42 Aligned_cols=144 Identities=12% Similarity=0.064 Sum_probs=114.5
Q ss_pred ccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhh
Q psy11396 588 TVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWA 667 (829)
Q Consensus 588 ~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~ 667 (829)
-.+.+|.++++.+++|+++++|||++ ||.|+|+....... ..+..+..++||+||+++|.|.|+|+.
T Consensus 22 ~~~~~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~~~~~---------~~i~~~~~~~kpVia~v~G~a~g~g~~ 88 (177)
T cd07014 22 VSGDTTAAQIRDARLDPKVKAIVLRV----NSPGGSVTASEVIR---------AELAAARAAGKPVVASGGGNAASGGYW 88 (177)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHHHHHH---------HHHHHHHhCCCCEEEEECCchhHHHHH
Confidence 34778999999999999999999985 78899876543211 122233348999999999999999999
Q ss_pred hhhccccccccccceeccccccccccCCCccee--------ccccccC--HHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396 668 MGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTL--------IFPQRFG--KILSREILFTASEFKGKELKERGISMPVLP 737 (829)
Q Consensus 668 lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~--------~l~r~iG--~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~ 737 (829)
|+++||+++++++++|+++.+..+..+...... .+++..| ....++++..|..++++||++.||||++.+
T Consensus 89 la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A~~~GLVD~v~~ 168 (177)
T cd07014 89 ISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDAKANGLVDSLGS 168 (177)
T ss_pred HHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHHHHcCCcccCCC
Confidence 999999999999999999988776433222222 3444445 888999999999999999999999999999
Q ss_pred hhhHHHH
Q psy11396 738 RKQVLFY 744 (829)
Q Consensus 738 ~~~l~~~ 744 (829)
.+++.++
T Consensus 169 ~~e~~~~ 175 (177)
T cd07014 169 FDDAVAK 175 (177)
T ss_pred HHHHHHH
Confidence 8877653
No 189
>KOG1391|consensus
Probab=99.61 E-value=1.2e-14 Score=143.58 Aligned_cols=244 Identities=17% Similarity=0.262 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t 279 (829)
++.|...|++.||..+++.++.++...+|.++.++.... .++.++....|+ .-|..+
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgI---------------------Yl~RHvGL~~GvP~e~pALt 86 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGI---------------------YLARHVGLRVGVPKETPALT 86 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCce---------------------EeeeccccccCCcCccCcee
Confidence 456788899999999999999999666666666554221 122334444443 348999
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHH---------------------H----------------
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHI---------------------K---------------- 322 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~---------------------~---------------- 322 (829)
|+.-|.||.+++..+++.|.-|+++++|+||+|.|+..+... .
T Consensus 87 iNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~TAEn 166 (396)
T KOG1391|consen 87 INRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAMTAEN 166 (396)
T ss_pred ehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhhhHHH
Confidence 999999999999999999999999999999999876421100 0
Q ss_pred -----------------HH--------HcCCCC------------------CCCCCCC-------------CCCC-----
Q psy11396 323 -----------------MS--------KSGMLS------------------PDGHCYS-------------FDQR----- 341 (829)
Q Consensus 323 -----------------~~--------~~g~ls------------------~~~~~~p-------------fd~~----- 341 (829)
.+ ..|... -+.+.|| |..+
T Consensus 167 L~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~KLppvFkKdG~VtA 246 (396)
T KOG1391|consen 167 LAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQKLPPVFKKDGTVTA 246 (396)
T ss_pred hhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHhhCCchhccCCeeec
Confidence 00 000000 0112222 1111
Q ss_pred CCCcccccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q psy11396 342 ANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT 421 (829)
Q Consensus 342 ~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt 421 (829)
.+...++|||+++++.+++..++.+.+|+|+|.++....-....+...| .-+|+.+|+.+|++..|||.||.+-.
T Consensus 247 GnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcdP~IMGIGP-----vPAI~~vLKksGlkl~DiDl~EvNEA 321 (396)
T KOG1391|consen 247 GNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCDPSIMGIGP-----VPAISGVLKKSGLKLKDIDLVEVNEA 321 (396)
T ss_pred cccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccChhhccccC-----cHHHHHHHHHcCCcccccceEEechh
Confidence 1223478999999999999999999999999999987654333333333 34899999999999999999999833
Q ss_pred CCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcC
Q psy11396 422 GTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 422 gt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~ 479 (829)
..+ ...|..+.++ .....+.|+.-.-.+|||+||||...-...++.|+++
T Consensus 322 FAp-----Q~LAv~r~L~---ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr 371 (396)
T KOG1391|consen 322 FAP-----QYLAVERSLD---LDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRR 371 (396)
T ss_pred hch-----HHHHHHHhhC---CChhhccccCceeeccCccccCcchhhHHHHHHHHHc
Confidence 322 1223333332 2234456666666789999999999999999998774
No 190
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=99.59 E-value=1e-13 Score=152.38 Aligned_cols=240 Identities=16% Similarity=0.251 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv 280 (829)
...|+.+|+++||+++|+++++++ .+++|+..+++. . ..+..++..+|+++ |++.|
T Consensus 51 ~~~la~~A~~~aL~~ag~~~~dId----~vi~~s~~~~~~------------------~-~~~~~v~~~Lg~~~~~~~~v 107 (326)
T CHL00203 51 LTKLAAEAANKALDKAHMDPLEID----LIILATSTPDDL------------------F-GSASQLQAEIGATRAVAFDI 107 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCC------------------C-chHHHHHHHhCCCCCceeee
Confidence 467999999999999999999998 788876443221 0 12346788888865 77899
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK 360 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~ 360 (829)
..+|+|++.||..|.++|++|.++.+||+|+|.+.... +++.....+++||||+|+||++.+
T Consensus 108 ~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~------------------~~~~~~~~~~fgDga~A~ll~~~~ 169 (326)
T CHL00203 108 TAACSGFILALVTATQFIQNGSYKNILVVGADTLSKWI------------------DWSDRKTCILFGDGAGAAIIGASY 169 (326)
T ss_pred cccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcC------------------CcccCCceEEEcceeeEEEEEEcC
Confidence 99999999999999999999999999999999853211 112223567899999999998743
Q ss_pred hhhhCCCceEEEEEEeeeecCCCC----------------CCCCCCC---------H--------HHHHHHHHHHHHHcC
Q psy11396 361 DAKKDGDDIYCIIKGWGVNQDGKT----------------NGITAPN---------T--------KSQIRLQTKIYKKFN 407 (829)
Q Consensus 361 ~A~~~g~~i~a~I~g~~~~~dg~~----------------~~~~~p~---------~--------~~~~~ai~~Al~~Ag 407 (829)
. ..+. ++...+++.. .....|. + ....++++++|+++|
T Consensus 170 ~-----~~~~----~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g 240 (326)
T CHL00203 170 E-----NSIL----GFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALN 240 (326)
T ss_pred C-----CCeE----EEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2 1121 2111111110 0000010 0 124457899999999
Q ss_pred CCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCC
Q psy11396 408 INPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINY 487 (829)
Q Consensus 408 l~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~ 487 (829)
++++|||++-+|-.+... .+++.+.++- ..+.++ ..-..+||+.+|+=...|..+ ++.|.+.
T Consensus 241 ~~~~did~~~~hq~~~~~-----~~~~~~~lgl---~~~k~~--~~l~~~Gn~~sasi~~~L~~~---~~~g~~~----- 302 (326)
T CHL00203 241 ISIDEVDWFILHQANKRI-----LEAIANRLSV---PNSKMI--TNLEKYGNTSAASIPLALDEA---IQNNKIQ----- 302 (326)
T ss_pred CCHHHCCEEEECCCCHHH-----HHHHHHHhCC---CHHHhh--hHHHhhCcHHHHHHHHHHHHH---HHhCCCC-----
Confidence 999999999999555432 3445555542 112222 223467999998866666554 3444332
Q ss_pred CCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 488 NILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 488 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
+..++++-+||.|=+-.++|++
T Consensus 303 ----------------------------~Gd~vll~~~G~G~s~~~~v~~ 324 (326)
T CHL00203 303 ----------------------------PGQIIVLSGFGAGLTWGAIVLK 324 (326)
T ss_pred ----------------------------CCCEEEEEEEchhhhheEEEEE
Confidence 1246888999998887888876
No 191
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=99.57 E-value=1.8e-13 Score=153.08 Aligned_cols=242 Identities=17% Similarity=0.260 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv 280 (829)
...|+.+|+++||+++|+++++++ -+++++..+++. . ..+..+...+|+++ |++.|
T Consensus 96 ~~~La~~Aa~~aL~~agi~~~dId----~li~~s~~~~~~------------------~-~~a~~v~~~LG~~~~~~~dv 152 (379)
T PLN02326 96 LTSLAVEAAKKALEMAGVDPEDVD----LVLLCTSSPDDL------------------F-GSAPQVQAALGCTNALAFDL 152 (379)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCcc------------------C-cHHHHHHHHhCCCCCceeec
Confidence 467999999999999999999987 677775533221 0 13557888899865 77889
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK 360 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~ 360 (829)
+.+|+|++.||..|.++|++|.++.+||+|.|.+.... .|+...+.+++||||+|+||++.+
T Consensus 153 ~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~------------------~~~d~~~~~lfGDGAaAvlL~~~~ 214 (379)
T PLN02326 153 TAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRYV------------------DWTDRGTCILFGDGAGAVVLQACD 214 (379)
T ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCCC------------------CccccCceEEEcceeEEEEEEEcC
Confidence 99999999999999999999999999999999753111 122234556899999999999754
Q ss_pred hhhhCCCceEEEEEEeeeecCCCC-----------------------CCC---------CCCCH--------HHHHHHHH
Q psy11396 361 DAKKDGDDIYCIIKGWGVNQDGKT-----------------------NGI---------TAPNT--------KSQIRLQT 400 (829)
Q Consensus 361 ~A~~~g~~i~a~I~g~~~~~dg~~-----------------------~~~---------~~p~~--------~~~~~ai~ 400 (829)
... ..++ ++...+++.. ... ....+ ....++++
T Consensus 215 ~~~---~~i~----~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~ 287 (379)
T PLN02326 215 DDE---DGLL----GFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIE 287 (379)
T ss_pred CCC---CceE----EEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHH
Confidence 321 1111 1111111100 000 00011 12346788
Q ss_pred HHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 401 KIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 401 ~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
++|+++|++++|||++-.|-.+... .+.+.+.++- ..+.++ ... ..+||+.+|+=.+.|..++ +.+.
T Consensus 288 ~~L~~~gl~~~dId~~v~Hq~n~~~-----~~~~~~~Lgl---~~ek~~-~~l-~~~GNt~sAsi~~~L~~~~---~~g~ 354 (379)
T PLN02326 288 SALQKAGLTAESIDWLLLHQANQRI-----IDAVAQRLGI---PPEKVI-SNL-ANYGNTSAASIPLALDEAV---RSGK 354 (379)
T ss_pred HHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHcCC---CHHHee-ecH-hhcCcHHHHHHHHHHHHHH---HcCC
Confidence 9999999999999999999554432 2334555542 122232 223 4789999998666665543 3322
Q ss_pred CCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 481 LPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 481 ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
+ ++..+++..+||.|-+-.+++|+
T Consensus 355 ~---------------------------------~~Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 355 V---------------------------------KKGDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred C---------------------------------CCCCEEEEEEEChhheeeEEEEE
Confidence 1 12356889999998888888875
No 192
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.53 E-value=4.7e-13 Score=147.79 Aligned_cols=239 Identities=15% Similarity=0.219 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCC--Cccee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQ--GPCLA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--Gp~~t 279 (829)
...|+++|+++||++||+++++|+ ++++++..+++. ....+..+...+|++ -+++.
T Consensus 50 ~~~la~~Aa~~aL~~agl~~~dID----~li~~s~~~~~~------------------~p~~a~~v~~~LGl~~~~~~~d 107 (345)
T TIGR00748 50 TATIGVEAARNALKRAKIDPKDIG----AVYVGSESHPYA------------------VKPTATIVAEAIGATPDLTAAD 107 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCcc------------------ccchHHHHHHHcCCCCCceEEE
Confidence 467999999999999999999998 788876544331 112356788899985 37888
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL 359 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~ 359 (829)
|..+|++++.||..|.++|++|.++.+||.+.|.+.. .+. +..-+..||||+|+||++.
T Consensus 108 v~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~-------------~~~--------~~~~~~~GDGAaA~vl~~~ 166 (345)
T TIGR00748 108 LEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQG-------------APG--------DALEYTAGAGGAAYIIGEK 166 (345)
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeccc-------------CCC--------ccCcccCCCceEEEEEccC
Confidence 9999999999999999999999999999999997531 011 1112556999999999864
Q ss_pred hhhhhCCCceEEEEEEee-eecCCCC---C-CCCCC-----------CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy11396 360 KDAKKDGDDIYCIIKGWG-VNQDGKT---N-GITAP-----------NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGT 423 (829)
Q Consensus 360 ~~A~~~g~~i~a~I~g~~-~~~dg~~---~-~~~~p-----------~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt 423 (829)
+.. +.+.+.. ...++.. . +...| -.....++++++|+++|++++|||++-+|-.+.
T Consensus 167 ~~~--------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~ 238 (345)
T TIGR00748 167 NTV--------AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNG 238 (345)
T ss_pred Ccc--------eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCCh
Confidence 311 1222211 1111100 0 00001 012234788899999999999999999994443
Q ss_pred CCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeee
Q psy11396 424 KLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFI 503 (829)
Q Consensus 424 ~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v 503 (829)
. -.+.+.+.++- ....++.+-.-..+||+.+|+=.+.|..++.. +.
T Consensus 239 ~-----~~~~~~~~lgl---~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~-----~~--------------------- 284 (345)
T TIGR00748 239 K-----FYLVAARMLGF---PKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI-----AE--------------------- 284 (345)
T ss_pred H-----HHHHHHHHcCC---CHHHeeccccccccCchhhhHHHHHHHHHHHh-----cC---------------------
Confidence 2 22234444442 11222222112568999999977777665321 10
Q ss_pred ccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 504 NTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 504 ~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
+..+++..+||-|-+.++++++
T Consensus 285 ------------~Gd~vll~~~G~G~s~~~~~~~ 306 (345)
T TIGR00748 285 ------------PGDRILAVSYGSGAGSDAFSIV 306 (345)
T ss_pred ------------CCCEEEEEEecCCcceeEEEEE
Confidence 1236899999999888888886
No 193
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=99.53 E-value=1.6e-13 Score=150.75 Aligned_cols=215 Identities=15% Similarity=0.186 Sum_probs=145.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC-CCcceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL-QGPCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl-~Gp~~tv 280 (829)
...|+.+|+++||+++|+++++++ .+++++....+. ....+.+++..+|+ ..|+++|
T Consensus 48 ~~~l~~~a~~~aL~~ag~~~~~Id----~li~~~~~~~~~------------------~~~~~~~i~~~lg~~~~~~~~v 105 (324)
T cd00827 48 VPTMAVEAARRALERAGIDPDDIG----LLIVATESPIDK------------------GKSAATYLAELLGLTNAEAFDL 105 (324)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CccHHHHHHHHcCCCCCceeeh
Confidence 467999999999999999999998 788876543221 22356778999999 4689999
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK 360 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~ 360 (829)
+.+|+|++.||..|+++|++|.++.+||+|+|.+..... .....++++||||+|+||++.+
T Consensus 106 ~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~-------------------~~~~~~~~~gdgaaA~ll~~~~ 166 (324)
T cd00827 106 KQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLD-------------------EGSALEPTLGDGAAAMLVSRNP 166 (324)
T ss_pred hhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhccc-------------------CCCCccccccCceEEEEEecCc
Confidence 999999999999999999999999999999998643321 2345789999999999999865
Q ss_pred hhhhCCCceEEEEEEeeeecCCCC---------CCC-------------CC--------CCHHHHHHHHHHHHHHcCCCC
Q psy11396 361 DAKKDGDDIYCIIKGWGVNQDGKT---------NGI-------------TA--------PNTKSQIRLQTKIYKKFNINP 410 (829)
Q Consensus 361 ~A~~~g~~i~a~I~g~~~~~dg~~---------~~~-------------~~--------p~~~~~~~ai~~Al~~Agl~~ 410 (829)
... +..+. ++...+++.. ... .. ........+++++|++++++
T Consensus 167 ~~~--~~~i~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 239 (324)
T cd00827 167 GIL--AAGIV----STHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS- 239 (324)
T ss_pred ccc--cCCce----eeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc-
Confidence 421 11222 2111111110 000 00 00234577888999999999
Q ss_pred CCccEEEecCCCC-CCCChHHHHHHHHHhcccCCCCCccccC--CcccCcCcchhhhhHHHHHHH
Q psy11396 411 NDIQLLEAHGTGT-KLGDPIEFEALCESFNKFSYHKNFCALG--SVKSNIGHSATAAGVIGMIKI 472 (829)
Q Consensus 411 ~dId~ve~hgtgt-~~gD~~E~~Al~~~~~~~~~~~~~~~v~--s~k~~~GH~~gAsG~~~li~~ 472 (829)
+||+++..|-.+. .. ...+.+.++- ....+... ..-..+||+.+|+-...+..+
T Consensus 240 ~~i~~~~~h~~~~~~~-----~~~~~~~l~~---~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~ 296 (324)
T cd00827 240 EDIDYFVPHQPNGKKI-----LEAVAKKLGG---PPEKASQTRWILLRRVGNMYAASILLGLASL 296 (324)
T ss_pred cccceeeccCchHHHH-----HHHHHHHccc---hHhhhccchhhHHHHhCchHHHHHHHHHHHH
Confidence 9999999995554 22 1222222221 01111111 234567999999866666655
No 194
>PRK06840 hypothetical protein; Validated
Probab=99.53 E-value=3.8e-13 Score=148.74 Aligned_cols=243 Identities=19% Similarity=0.198 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEc-cccccccccccCccccchhhhccccccchhhHhhhhccCCC-ccee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVG-CAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~t 279 (829)
...|+.+|+++||+++|+++++++ .+++. +...++. ....+.+++..+|++. +++.
T Consensus 53 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~~~~~~~~~------------------~p~~a~~l~~~lGl~~~~~~~ 110 (339)
T PRK06840 53 TSDMAIAAAKPALKQAGVDPAAID----VVIYIGSEHKDYP------------------VWSSAPKIQHEIGAKNAWAFD 110 (339)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCCCCC------------------CCchHHHHHHHhCCCCccccc
Confidence 567999999999999999999987 66543 3222221 1123577899999965 7888
Q ss_pred eccchhhHHHHHHHHHHHHHc-CCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCC--cccccceEEEEE
Q psy11396 280 IDTACSSSLVAIAHACDSLIL-GNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANG--FVPGEGVGVLML 356 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~-G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G--~~~gEGaaalvL 356 (829)
|..+|++++.||..|+++|++ |.++.+||.+.|...... .|+....+ +.+||||+|+||
T Consensus 111 v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~~------------------~~~~~~~~~~~~~GDgAaA~ll 172 (339)
T PRK06840 111 IMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSDLV------------------DYDNPRTRFMFNFAAGGSAALL 172 (339)
T ss_pred ccccchHHHHHHHHHHHHHhcCCCccEEEEEeeccccccc------------------CcCCCCeeeeccCCCceeEEEE
Confidence 999999999999999999999 999999999988632110 01111223 236999999999
Q ss_pred ccchhhhhCCCceEEEEEEeeeecCCCCC--------CC------------------CCCC----------HHHHHHHHH
Q psy11396 357 KKLKDAKKDGDDIYCIIKGWGVNQDGKTN--------GI------------------TAPN----------TKSQIRLQT 400 (829)
Q Consensus 357 ~~~~~A~~~g~~i~a~I~g~~~~~dg~~~--------~~------------------~~p~----------~~~~~~ai~ 400 (829)
++.+. +..+ .+....+++... +. ..+. .....++++
T Consensus 173 ~~~~~----~~~i----l~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 244 (339)
T PRK06840 173 KKDAG----KNRI----LGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIR 244 (339)
T ss_pred EecCC----CCce----EEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHH
Confidence 87432 2222 222222221100 00 0010 012457899
Q ss_pred HHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 401 KIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 401 ~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
++|+++|++++|||++-.|-.+... .+.+.+.++- ...... ....+||+.+|+=.+.|..++ +.+.
T Consensus 245 ~~L~~~gl~~~did~~~~h~~~~~~-----~~~~~~~Lgl---~~~~~~---~~~~~Gn~~sas~~~~L~~~~---~~~~ 310 (339)
T PRK06840 245 EALRKSGYTPKDIDYLAILHMKRSA-----HIALLEGLGL---TEEQAI---YLDEYGHLGQLDQILSLHLAL---EQGK 310 (339)
T ss_pred HHHHHcCCCHHHCCEEEECCcCHHH-----HHHHHHHcCC---CHHHeE---eHHhccchhhhhHHHHHHHHH---HcCC
Confidence 9999999999999999887443222 2344554442 111222 245789999988666665442 3322
Q ss_pred CCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 481 LPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 481 ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
+. ...+.+..+||.|.+-.+++|+-.
T Consensus 311 ~~---------------------------------~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 311 LK---------------------------------DGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred CC---------------------------------CCCEEEEEEEehhhheeEEEEEec
Confidence 21 124689999999999999999853
No 195
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=99.53 E-value=6.6e-15 Score=147.80 Aligned_cols=140 Identities=13% Similarity=0.059 Sum_probs=105.7
Q ss_pred ccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEec---ccccch
Q psy11396 588 TVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQ---GHAIGA 664 (829)
Q Consensus 588 ~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~---G~a~Gg 664 (829)
.+...+...+..+++++ ++.|+|. .=|.|+++...... +..+..+|||||++|+ |+|.|+
T Consensus 13 ~~~~~l~~~l~~a~~~~-~~~vvl~----InSpGG~v~~~~~i------------~~~l~~~~kPvia~v~~~~G~Aasg 75 (187)
T cd07020 13 ATADYLERAIDQAEEGG-ADALIIE----LDTPGGLLDSTREI------------VQAILASPVPVVVYVYPSGARAASA 75 (187)
T ss_pred HHHHHHHHHHHHHHhCC-CCEEEEE----EECCCCCHHHHHHH------------HHHHHhCCCCEEEEEecCCCCchhH
Confidence 33455667777777554 6766664 22445665443321 1223458999999999 999999
Q ss_pred hhhhhhccccccccccceeccccccccccCCC--------------cceeccccccCH--HHHHHHHhcCCccCHHHHHH
Q psy11396 665 GWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA--------------GSTLIFPQRFGK--ILSREILFTASEFKGKELKE 728 (829)
Q Consensus 665 G~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~--------------g~~~~l~r~iG~--~~a~e~ll~g~~~~a~eA~~ 728 (829)
|+.++++||+++++++++|++++...+..+.. .....++++.|. .++++++++|+.|+++||++
T Consensus 76 G~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~~~a~~~l~~g~~~~a~eA~~ 155 (187)
T cd07020 76 GTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELRGRNAEWAEKAVRESLSLTAEEALK 155 (187)
T ss_pred HHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCeecHHHHHH
Confidence 99999999999999999999999885544322 124467888887 79999999999999999999
Q ss_pred cCCcccccChh-hHHHH
Q psy11396 729 RGISMPVLPRK-QVLFY 744 (829)
Q Consensus 729 ~GLv~~v~~~~-~l~~~ 744 (829)
+||||++++++ ++...
T Consensus 156 ~Glvd~v~~~~~~~~~~ 172 (187)
T cd07020 156 LGVIDLIAADLNELLKK 172 (187)
T ss_pred cCCcccccCCHHHHHHH
Confidence 99999999876 56543
No 196
>PRK04262 hypothetical protein; Provisional
Probab=99.53 E-value=3e-13 Score=149.74 Aligned_cols=239 Identities=18% Similarity=0.228 Sum_probs=156.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--ccee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t 279 (829)
...|+.+|+++||++||+++++++ .+++++..++|. .+ ..+.++...+|++. +++.
T Consensus 51 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~~~~-----------------~p-~~a~~v~~~Lgl~~~~~~~d 108 (347)
T PRK04262 51 TATIAVEAARNALKRAGIDPKEIG----AVYVGSESHPYA-----------------VK-PTATIVAEALGATPDLTAAD 108 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCcc-----------------cc-cHHHHHHHHcCCCCCceEEE
Confidence 457999999999999999999998 777776543331 11 23457888899964 6788
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL 359 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~ 359 (829)
++.+|++++.||..|.++|++|.++.+||.+.|.... .+.. ..-+..||||+|+||++.
T Consensus 109 v~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~-------------~~~~--------~~~~~~GDGA~A~ll~~~ 167 (347)
T PRK04262 109 LEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG-------------APGD--------ALEYTAAAGGAAFIIGKE 167 (347)
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeecc-------------CCCC--------CCCCcCCCCcEEEEEecC
Confidence 9999999999999999999999999999999997210 0110 111335999999999863
Q ss_pred hhhhhCCCceEEEEEEee-eecCCCCC----CC--------CC--C-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC
Q psy11396 360 KDAKKDGDDIYCIIKGWG-VNQDGKTN----GI--------TA--P-NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGT 423 (829)
Q Consensus 360 ~~A~~~g~~i~a~I~g~~-~~~dg~~~----~~--------~~--p-~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt 423 (829)
+. ..+|.+.. ...++... +. .. + ......++++++|+++|++++|||++-+|-.+.
T Consensus 168 ~~--------~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~ 239 (347)
T PRK04262 168 EV--------IAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQPNG 239 (347)
T ss_pred cc--------cceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCCch
Confidence 21 12233321 11111100 00 00 0 013456789999999999999999999994444
Q ss_pred CCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeee
Q psy11396 424 KLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFI 503 (829)
Q Consensus 424 ~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v 503 (829)
.. .+.+.+.++- ....+..+-+-..+||+.+|+=...|..++. . +.
T Consensus 240 ~~-----~~~~~~~Lgl---~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~---~--~~--------------------- 285 (347)
T PRK04262 240 KF-----PLRVAKMLGF---TKEQVKPGLLTPYIGNTYSGSALLGLAAVLD---V--AK--------------------- 285 (347)
T ss_pred HH-----HHHHHHHcCC---CHHHhhccchhhhhCChHHHHHHHHHHHHHH---h--CC---------------------
Confidence 33 2233333431 1222332222356899999997776665431 1 10
Q ss_pred ccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 504 NTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 504 ~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
+..+++..+||.|-+...++++
T Consensus 286 ------------~Gd~vll~~~G~G~~~~~~~~~ 307 (347)
T PRK04262 286 ------------PGDRILVVSFGSGAGSDAFSIT 307 (347)
T ss_pred ------------CCCEEEEEecCCCcceeeEEEE
Confidence 1236899999998877777775
No 197
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.47 E-value=2.8e-12 Score=140.96 Aligned_cols=242 Identities=16% Similarity=0.192 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC-cceee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG-PCLAI 280 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G-p~~tv 280 (829)
...|+.+|+++||+++|+++++|+ -+++++..++|. ....+.+|+..||+.. +++.|
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~~Id----~li~~t~~~d~~------------------~p~~a~~v~~~Lg~~~~~~~di 109 (326)
T PRK05963 52 LSDLAASAGDMALSDAGIERSDIA----LTLLATSTPDHL------------------LPPSAPLLAHRLGLQNSGAIDL 109 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------CCcHHHHHHHHhCCCCCceeec
Confidence 467999999999999999999998 788887655442 1234568999999954 78889
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK 360 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~ 360 (829)
..+|++++.||..|..+|++|. +.+||.++|.+.. .+.+ +....++++||||+|+||++.+
T Consensus 110 ~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s~-----------~~~~-------~~~~~~~lfGDgA~A~ll~~~~ 170 (326)
T PRK05963 110 AGACAGFLYALVLADGFVRAQG-KPVLVVAANILSR-----------RINM-------AERASAVLFADAAGAVVLAPSA 170 (326)
T ss_pred cchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhhc-----------cCCc-------cccCceEEEeecceEEEEEecC
Confidence 9999999999999999999985 8899999987421 1111 1123567899999999998644
Q ss_pred hhhhCCCceEEEEEEeeeecCCCC-------------C----------CCCCCC--------HHHHHHHHHHHHHHcCCC
Q psy11396 361 DAKKDGDDIYCIIKGWGVNQDGKT-------------N----------GITAPN--------TKSQIRLQTKIYKKFNIN 409 (829)
Q Consensus 361 ~A~~~g~~i~a~I~g~~~~~dg~~-------------~----------~~~~p~--------~~~~~~ai~~Al~~Agl~ 409 (829)
.. ...+. +....+++.. . .+...+ .....++++++|+++|++
T Consensus 171 ~~---~~~~l----~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~ 243 (326)
T PRK05963 171 KA---NSGVL----GSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMT 243 (326)
T ss_pred CC---CCceE----EEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 21 11111 1111111110 0 000001 123456888999999999
Q ss_pred CCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCC
Q psy11396 410 PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPTINYNI 489 (829)
Q Consensus 410 ~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~ 489 (829)
++|||++-+|-.+.. -.+.+.+.++- ....+ + ..-..+||+.+|+=.+.|..+ ++.+.+
T Consensus 244 ~~did~~~~h~~~~~-----~~~~~~~~l~l---~~~k~-~-~~l~~~Gn~~sas~~~~L~~~---~~~~~~-------- 302 (326)
T PRK05963 244 PQDIDRFFPHQANAR-----IVDKVCETIGI---PRAKA-A-STLETYGNSSAATIPLSLSLA---NLEQPL-------- 302 (326)
T ss_pred HHHCCEEEeCCCCHH-----HHHHHHHHcCC---CHHHh-h-hhHHhhCcHHHHHHHHHHHHH---HHhCCC--------
Confidence 999999999944432 23334444431 11111 1 222467999777755544332 223211
Q ss_pred CCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 490 LNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 490 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
.+..++++.+||.|-+-.++||+
T Consensus 303 -------------------------~~Gd~vll~~~G~G~~~~~~ll~ 325 (326)
T PRK05963 303 -------------------------REGERLLFAAAGAGMTGGAVVMR 325 (326)
T ss_pred -------------------------CCCCEEEEEEEehhhhheeeEEe
Confidence 12356899999999888888876
No 198
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=99.46 E-value=1.3e-13 Score=153.91 Aligned_cols=97 Identities=26% Similarity=0.490 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHcCCC--CCCCCCC-ceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--ccee
Q psy11396 205 LFLQNCWTCIEDAGYN--PFSLSGS-LCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLA 279 (829)
Q Consensus 205 l~l~aa~~AL~dAGl~--~~~i~~~-~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t 279 (829)
+..++...++.|+++. +.+++.. --.+++|+.... +.....++..++...|+.+ |.++
T Consensus 25 l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~-----------------g~~~~~~ar~~a~~aGl~~~~p~~~ 87 (392)
T COG0183 25 LAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQA-----------------GEQGQNIARQAALAAGLPGSVPAVT 87 (392)
T ss_pred cCHHHHHHHHHHHHhhhccccCCHHHhhhheecccccc-----------------ccccccHHHHHHHHcCCCCCCCceE
Confidence 3344556667777663 2244432 224566533211 1123456677888999975 9999
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChH
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPD 318 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~ 318 (829)
|+.+|+||+.|+..|++.|++|.+|++|+||+|+|+...
T Consensus 88 V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~ 126 (392)
T COG0183 88 VNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAP 126 (392)
T ss_pred EeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCC
Confidence 999999999999999999999999999999999987654
No 199
>KOG1392|consensus
Probab=99.43 E-value=1.3e-13 Score=138.21 Aligned_cols=274 Identities=19% Similarity=0.244 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCcceeec
Q psy11396 204 RLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLAID 281 (829)
Q Consensus 204 ~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~tv~ 281 (829)
.|+.++....|+.-.++.+.++ -+++|+-... .-.+.++...+..-|+ +-|..||.
T Consensus 68 dlar~al~~ll~kt~lpke~~d----yii~gtviqe------------------vktsniareaal~agfsdktpahtvt 125 (465)
T KOG1392|consen 68 DLAREALKALLEKTKLPKEQLD----YIICGTVIQE------------------VKTSNIAREAALLAGFSDKTPAHTVT 125 (465)
T ss_pred HHHHHHHHHHHHhccCCHHHhc----eeeehhhHHH------------------HhcchHHHHHHHhcCCCCCCccceee
Confidence 4566777788888888888887 5666643211 1123455555555566 56999999
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHH------------------------cCCCCCC-----
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSK------------------------SGMLSPD----- 332 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~------------------------~g~ls~~----- 332 (829)
.+|-|+.+|+..++.+|..|.||++++||+|.+++.+....... ...++|+
T Consensus 126 macissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~nflapelpava 205 (465)
T KOG1392|consen 126 MACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKNFLAPELPAVA 205 (465)
T ss_pred eehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhhccCcCcchhe
Confidence 99999999999999999999999999999998876433211000 0011100
Q ss_pred -------------------------------------------C---CCCCCCC--------------------------
Q psy11396 333 -------------------------------------------G---HCYSFDQ-------------------------- 340 (829)
Q Consensus 333 -------------------------------------------~---~~~pfd~-------------------------- 340 (829)
+ ...||--
T Consensus 206 efstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftdvvpfkv~gkd~~t~kdngirvssle~laklkp 285 (465)
T KOG1392|consen 206 EFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTDVVPFKVDGKDPKTIKDNGIRVSSLEKLAKLKP 285 (465)
T ss_pred eccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccceeeEecCCCCcceecCCCcccCCHHHHhhcCc
Confidence 0 0001110
Q ss_pred ----------CCCCcccccceEEEEEccchhhhhCCCceEEEEEEeee-ecCCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy11396 341 ----------RANGFVPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGV-NQDGKTNGITAPNTKSQIRLQTKIYKKFNIN 409 (829)
Q Consensus 341 ----------~~~G~~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~-~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~ 409 (829)
.++...+.|||.+.++..+|.|.+.|.++-|.++.+-. ++|+...-+..| ..++.+.|++||++
T Consensus 286 afvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgp-----ay~ipkll~kaglt 360 (465)
T KOG1392|consen 286 AFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGP-----AYVIPKLLDKAGLT 360 (465)
T ss_pred hhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheeccc-----ccccHHHHHHcCCc
Confidence 12224468999999999999999999999999999864 566655444444 45889999999999
Q ss_pred CCCccEEEecCCCCCCCChHHHHHH-HHHhc----ccCCCCCcccc-----CCcccCcCcchhhhhHHHHHHHHHHHhcC
Q psy11396 410 PNDIQLLEAHGTGTKLGDPIEFEAL-CESFN----KFSYHKNFCAL-----GSVKSNIGHSATAAGVIGMIKIILSLKHK 479 (829)
Q Consensus 410 ~~dId~ve~hgtgt~~gD~~E~~Al-~~~~~----~~~~~~~~~~v-----~s~k~~~GH~~gAsG~~~li~~~l~L~~~ 479 (829)
..|||.+|.|-...-. =.....|+ ...|. +....-+.+|+ ....-.||||+||+|+.-...+...|++
T Consensus 361 lkdid~feiheafagq-ilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~mh~anrl~~- 438 (465)
T KOG1392|consen 361 LKDIDVFEIHEAFAGQ-ILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLAMHSANRLKE- 438 (465)
T ss_pred ccccchhhhHHHHhHH-HHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhHHHHHhHHHh-
Confidence 9999999999332110 00001111 01121 10101111222 2222347999999999988877766644
Q ss_pred CCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeeccc
Q psy11396 480 VLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541 (829)
Q Consensus 480 ~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~ 541 (829)
.+.++++|-+..-||+...+++|.||.
T Consensus 439 -----------------------------------e~gqygvvaacaaggqgvamlieaypk 465 (465)
T KOG1392|consen 439 -----------------------------------EKGQYGVVAACAAGGQGVAMLIEAYPK 465 (465)
T ss_pred -----------------------------------hcCceeEeehhhcCCcceEEEeeccCC
Confidence 235688999999999999999999873
No 200
>PLN03172 chalcone synthase family protein; Provisional
Probab=99.39 E-value=4.4e-11 Score=133.50 Aligned_cols=275 Identities=13% Similarity=0.099 Sum_probs=169.0
Q ss_pred CCCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhh
Q psy11396 190 NISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSY 269 (829)
Q Consensus 190 ~i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 269 (829)
++..+......-...|+.+|+++||+++|+++++|+ .+++.+..+.. ....+.+|..
T Consensus 90 ~~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId----~ii~~t~t~~~-------------------~P~~a~~l~~ 146 (393)
T PLN03172 90 SLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT----HLVFCTTSGVD-------------------MPGADYQLTK 146 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCCc-------------------CchHHHHHHH
Confidence 455555556666778999999999999999999987 67666654210 1236788999
Q ss_pred hccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcc
Q psy11396 270 FLNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFV 346 (829)
Q Consensus 270 ~lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~ 346 (829)
.||++.- .+.+..+|++++.+|..|.+++++|....+||.++|.++.... .++. +..+.--....
T Consensus 147 ~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~----------~~~d--~~~~~~v~~~L 214 (393)
T PLN03172 147 LLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFR----------GPSD--THLDSLVGQAL 214 (393)
T ss_pred HhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhhc----------cccc--ccHHhhhccch
Confidence 9999763 3567999999999999999999999999999999998641110 0000 00000013477
Q ss_pred cccceEEEEEccchhhhhCCCceEEEEEEeee----ecCCCCC------C------CCCC--CHHHHHHHHHHHHHHcCC
Q psy11396 347 PGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGV----NQDGKTN------G------ITAP--NTKSQIRLQTKIYKKFNI 408 (829)
Q Consensus 347 ~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~----~~dg~~~------~------~~~p--~~~~~~~ai~~Al~~Agl 408 (829)
+||||+|+||+..+... .. ++.-+|.++.. .+++... + ...| -...+...+++.|++.|+
T Consensus 215 FGDGAaAvVl~~~~~~~-~~-~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl 292 (393)
T PLN03172 215 FGDGAAAVIIGADPDTK-IE-RPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGI 292 (393)
T ss_pred hcCceEEEEEecCCCCc-cc-CceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCC
Confidence 89999999998743321 01 12123444321 1221100 0 0011 123345677788899999
Q ss_pred CCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHHHHH-HhcCCCCCCCC
Q psy11396 409 NPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKIILS-LKHKVLPPTIN 486 (829)
Q Consensus 409 ~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~-L~~~~ipp~~~ 486 (829)
++.||+++-+|=-| ..=.+++.+.++-. .+.+..+ .+-...|++-+|+=..-|-+.... ++.+.+.
T Consensus 293 ~~~di~~~~~Hqgg-----~~Il~~v~~~Lgl~---~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~---- 360 (393)
T PLN03172 293 NDWNSIFWIAHPGG-----PAILDQVEIKLDLK---EEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGS---- 360 (393)
T ss_pred CccccceEEecCCc-----HHHHHHHHHHcCCC---HHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCC----
Confidence 99999999999443 33455566665521 1111110 123346888888744444432210 1111110
Q ss_pred CCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 487 YNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 487 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
+.....+++..+||.|=+-..++|+..
T Consensus 361 --------------------------~G~~~~~~ll~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 361 --------------------------TGEGLEWGVLFGFGPGLTVETVVLHSV 387 (393)
T ss_pred --------------------------CCCCcceEEEEEeCCcceeeeeeeEec
Confidence 001124689999999888888888864
No 201
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=99.37 E-value=1.3e-11 Score=137.69 Aligned_cols=231 Identities=13% Similarity=0.139 Sum_probs=146.8
Q ss_pred hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC
Q psy11396 196 AEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG 275 (829)
Q Consensus 196 ~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 275 (829)
.........|+.+|++.||+++|+++++++ .++++++.+ | .....+.+|...+|++.
T Consensus 79 ~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id----~li~~s~~~-~------------------~~P~~a~~i~~~lgl~~ 135 (361)
T cd00831 79 DIALEEARELAEEAARGALDEAGLRPSDID----HLVVNTSTG-N------------------PTPSLDAMLINRLGLRP 135 (361)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEECCCC-C------------------CCCCHHHHHHHHhCCCc
Confidence 334445678999999999999999999998 777776532 2 12345678999999973
Q ss_pred --cceeec-cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceE
Q psy11396 276 --PCLAID-TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVG 352 (829)
Q Consensus 276 --p~~tv~-~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaa 352 (829)
+++.|. .+|++++.||..|..+|++|..+.+||.++|.++... .++. ..+.--..+++||||+
T Consensus 136 ~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~~~-----------~~~d---~~~~~~~~~lfGDgaa 201 (361)
T cd00831 136 DVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLWY-----------RGPD---HRSMLVGNALFGDGAA 201 (361)
T ss_pred ccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeeccccee-----------CCCC---cHHHhhhhhhccCCce
Confidence 678898 8999999999999999999999999999999854310 0000 0000013577899999
Q ss_pred EEEEccchhhhhCCCceEEEEEEeeeec--------------CCCCCCCC--CCC--HHHHHHHHHHHHHHc--CCCCCC
Q psy11396 353 VLMLKKLKDAKKDGDDIYCIIKGWGVNQ--------------DGKTNGIT--APN--TKSQIRLQTKIYKKF--NINPND 412 (829)
Q Consensus 353 alvL~~~~~A~~~g~~i~a~I~g~~~~~--------------dg~~~~~~--~p~--~~~~~~ai~~Al~~A--gl~~~d 412 (829)
|+||++.+..... ......+.+..... .+...... .+. .....++++++|+++ |++++|
T Consensus 202 A~ll~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~d 280 (361)
T cd00831 202 AVLLSNDPRDRRR-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLA 280 (361)
T ss_pred EEEEEcCCCcccc-cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCcccc
Confidence 9999976543110 01112222221110 00000000 000 224567889999999 999999
Q ss_pred ccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcccc-CCcccCcCcchhhhhHHHHHHH
Q psy11396 413 IQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL-GSVKSNIGHSATAAGVIGMIKI 472 (829)
Q Consensus 413 Id~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v-~s~k~~~GH~~gAsG~~~li~~ 472 (829)
|+++-.|-.+... .+++.+.++- ..+.+.. -.+-..+||+.+|+=...|..+
T Consensus 281 id~~~~H~~~~~i-----~~~v~~~lgl---~~~~~~~s~~~l~~~GN~~sasi~~~L~~~ 333 (361)
T cd00831 281 FDHWCVHPGGRAV-----LDAVEKALGL---SPEDLEASRMVLRRYGNMSSSSVLYVLAYM 333 (361)
T ss_pred ceEEEECCCChHH-----HHHHHHHcCC---CHHHHHHHHHHHHHhCCchhccHHHHHHHH
Confidence 9999999655433 2344555542 1111211 1223457999999866666654
No 202
>PLN03170 chalcone synthase; Provisional
Probab=99.33 E-value=5.6e-11 Score=133.19 Aligned_cols=346 Identities=12% Similarity=0.086 Sum_probs=197.4
Q ss_pred CCEEEEecccccCC-CCCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCC----
Q psy11396 115 DDIAIIGISGQFPK-ANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFF---- 189 (829)
Q Consensus 115 ~~IaItG~g~~~p~-g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f---- 189 (829)
-+..|.|+|...|. ....+++++.+..--.. ...+..+-.....++. . ..-.++....++....++.++
T Consensus 19 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~-s----gI~~R~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PLN03170 19 GPATVLAIGTATPANCVHQADYPDYYFRITKS-EHMTELKEKFKRMCDK-S----QIRKRYMHLTEEYLAENPNMCAYMA 92 (401)
T ss_pred CCeEEEEEeecCCCccccHHHHHHHHHHHccc-cCchhHHHHHHHHHHh-C----CCCceeEeccccchhhCccccccCC
Confidence 34779999999998 56777777776542210 0011100000011110 0 011111111111111122222
Q ss_pred -CCCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh
Q psy11396 190 -NISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS 268 (829)
Q Consensus 190 -~i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 268 (829)
.+..+......-.-.|+.+|+++||+++|+++++|+ .+++.+..+ + ....++.+|.
T Consensus 93 p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~lI~~T~Tg-~------------------~~Ps~a~~l~ 149 (401)
T PLN03170 93 PSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKIT----HLVFCTTSG-V------------------DMPGADYQLT 149 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCC-C------------------CCChHHHHHH
Confidence 345555555556668999999999999999999987 666665432 1 1223678899
Q ss_pred hhccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCc
Q psy11396 269 YFLNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGF 345 (829)
Q Consensus 269 ~~lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~ 345 (829)
..||++.- .+.+..+|++++.+|..|.+++++|....|||.++|.++... . .++. .. ++......
T Consensus 150 ~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~-----~-----~~~~-~~-~~~~~~~~ 217 (401)
T PLN03170 150 KMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTF-----R-----GPSE-SH-LDSMVGQA 217 (401)
T ss_pred HHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhcc-----C-----Cccc-ch-hhhhhhhh
Confidence 99999753 578999999999999999999999999999999999864211 0 0000 00 11112346
Q ss_pred ccccceEEEEEccchhhhhCCCceEEEEEEeeee----c----------CCCCCCC--CCC--CHHHHHHHHHHHHHHcC
Q psy11396 346 VPGEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVN----Q----------DGKTNGI--TAP--NTKSQIRLQTKIYKKFN 407 (829)
Q Consensus 346 ~~gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~----~----------dg~~~~~--~~p--~~~~~~~ai~~Al~~Ag 407 (829)
.+||||+|+||+..+... ...+..++.+.+.. + .|....+ ..| -...+...++++|+++|
T Consensus 218 LFGDGAaAvVl~~~~~~~--~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~g 295 (401)
T PLN03170 218 LFGDGAAAVIVGADPDER--VERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLG 295 (401)
T ss_pred hhhceeEEEEEecCCccc--ccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcC
Confidence 889999999998743210 01111123322111 0 1110000 001 12335668888999999
Q ss_pred CCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcccc-CCcccCcCcchhhhhHHHHHHHHHH-HhcCCCCCCC
Q psy11396 408 INPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL-GSVKSNIGHSATAAGVIGMIKIILS-LKHKVLPPTI 485 (829)
Q Consensus 408 l~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v-~s~k~~~GH~~gAsG~~~li~~~l~-L~~~~ipp~~ 485 (829)
++++||+++-+|=-| ..=.+++.+.++- ..+.+.. -.+-..+||+.+|+=...|-+.... ++.|.+.+
T Consensus 296 l~~~di~~~v~Hqgg-----~~il~~v~~~Lgl---~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~-- 365 (401)
T PLN03170 296 ITDYNSIFWVAHPGG-----PAILDQVEAKVGL---EKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATT-- 365 (401)
T ss_pred CCccccCeEEecCCc-----HHHHHHHHHHcCC---ChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCC--
Confidence 999999999999433 3334455555542 1111110 0223457999988855555554321 12222211
Q ss_pred CCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeeccc
Q psy11396 486 NYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEKIK 541 (829)
Q Consensus 486 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~~~ 541 (829)
.....+++..+||.|=+-.+++|+..+.
T Consensus 366 ----------------------------G~~~~~~ll~afGpG~t~~~~ll~~~~~ 393 (401)
T PLN03170 366 ----------------------------GEGFDWGVLFGFGPGLTVETVVLHSVPI 393 (401)
T ss_pred ----------------------------CCCccEEEEEEeCchHhHHhHHheeccc
Confidence 0112468899999988888888887443
No 203
>PLN03171 chalcone synthase-like protein; Provisional
Probab=99.30 E-value=3.4e-11 Score=135.12 Aligned_cols=270 Identities=13% Similarity=0.046 Sum_probs=160.2
Q ss_pred CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh
Q psy11396 191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF 270 (829)
Q Consensus 191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 270 (829)
+..+...+......|+.+|+++||+++|+++++|+ .+++++..+++ ....+..+...
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId----~li~~t~t~~~-------------------~P~~a~~v~~~ 153 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT----HLVVTTNSGAH-------------------IPGVDFRLVPL 153 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCC-------------------CCchHHHHHHH
Confidence 33444444556678999999999999999999998 78887765432 12346688899
Q ss_pred ccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccc
Q psy11396 271 LNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVP 347 (829)
Q Consensus 271 lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~ 347 (829)
||++.. .+.+..+|++++.+|..|..+|++|....|||.++|.++... .+.... .++..-.++++
T Consensus 154 LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~~-----------~~~d~~-~~~~~v~~~LF 221 (399)
T PLN03171 154 LGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLLF-----------NGPDEG-CFQTLLNQGLF 221 (399)
T ss_pred hCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEecccccc-----------CCCCcc-cHHhhhccccc
Confidence 999743 456677999999999999999999999999999999853211 000000 01111136789
Q ss_pred ccceEEEEEccchhhhhCCCceEEEEEEeeeecCCCC--------------CCCCCCC-HHHHHHHHHHHHHH-------
Q psy11396 348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGVNQDGKT--------------NGITAPN-TKSQIRLQTKIYKK------- 405 (829)
Q Consensus 348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~--------------~~~~~p~-~~~~~~ai~~Al~~------- 405 (829)
||||+|+||++.+...+++ ...|.......++.. ....... +....+.+++++++
T Consensus 222 GDGAaA~vl~~~~~~~~~~---~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~ 298 (399)
T PLN03171 222 GDGAAAVIVGADADAAERP---LFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLG 298 (399)
T ss_pred cCccEEEEEecCCCCCCCC---ceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999754321111 223333222111110 0011011 23344444666654
Q ss_pred --cCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHHHHHHhcCCCC
Q psy11396 406 --FNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKIILSLKHKVLP 482 (829)
Q Consensus 406 --Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~L~~~~ip 482 (829)
+|++++||+++ .|=.+ ..-.+++.+.++- ....++.+ .+-..+|++.+|+=...|-.++.+.+.+ +.
T Consensus 299 ~~~g~~~~di~~~-~Hq~~-----~~il~~v~~~Lgl---~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~-~~ 368 (399)
T PLN03171 299 GDGGAEWNDLFWA-VHPGS-----SAILDQVDAALGL---EPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEA-AA 368 (399)
T ss_pred cccCCCcccceEE-EcCCc-----HHHHHHHHHHcCC---CHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhc-CC
Confidence 58889999998 68333 2334455555542 11222211 1223579988877444444433221110 00
Q ss_pred CCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeee
Q psy11396 483 PTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLME 538 (829)
Q Consensus 483 p~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e 538 (829)
+.....+++..+||.|=+-.+++|+-
T Consensus 369 ------------------------------~G~~~d~vll~~fG~Glt~~~~ll~~ 394 (399)
T PLN03171 369 ------------------------------AGAWPELGVMMAFGPGLTVDAMLLHA 394 (399)
T ss_pred ------------------------------CCCCcceEEEEEEcccHHHHHHHhhc
Confidence 00012468899999987777777764
No 204
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=99.29 E-value=1.9e-12 Score=132.59 Aligned_cols=142 Identities=11% Similarity=0.055 Sum_probs=102.1
Q ss_pred ccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhh
Q psy11396 588 TVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWA 667 (829)
Q Consensus 588 ~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~ 667 (829)
..+.+|.++++.+..|+++++|||+ .||.|+|+..+....+ .+..+..++||+||+++|.|.|+|+.
T Consensus 21 ~~~~~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~~~~~~~~---------~l~~~~~~~kpVia~v~g~a~s~gy~ 87 (211)
T cd07019 21 VGGDTTAAQIRDARLDPKVKAIVLR----VNSPGGSVTASEVIRA---------ELAAARAAGKPVVVSAGGAAASGGYW 87 (211)
T ss_pred cCHHHHHHHHHHHhhCCCceEEEEE----EcCCCcCHHHHHHHHH---------HHHHHHhCCCCEEEEECCeehhHHHH
Confidence 3578899999999999999999997 8999999977643321 12223447999999999999999999
Q ss_pred hhhccccccccccceecccccc------ccccCCCcceeccccccCH---------------------------------
Q psy11396 668 MGLFCDYTIFSEESVYQSPYMR------YGFTPGAGSTLIFPQRFGK--------------------------------- 708 (829)
Q Consensus 668 lal~cD~~ia~~~a~f~~~e~~------~Gl~p~~g~~~~l~r~iG~--------------------------------- 708 (829)
|+++||++++++++.|+...+. -++.+..|..+.+.+..|.
T Consensus 88 la~~aD~i~a~~~a~~gsiGv~~~~~~~~~~l~k~Gv~~~~~~~~g~~k~~~~~~~s~e~r~~~~~~ld~~~~~f~~~Va 167 (211)
T cd07019 88 ISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLGLQLSIENGYKRFITLVA 167 (211)
T ss_pred HHHhCCEEEEcCCCEEEEeEEEEEcCCHHHHHHhcCCceEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998743321 0111444433333332120
Q ss_pred ------HHHHHHHhcCCccCHHHHHHcCCcccccChhhHH
Q psy11396 709 ------ILSREILFTASEFKGKELKERGISMPVLPRKQVL 742 (829)
Q Consensus 709 ------~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~ 742 (829)
....+-+..|..|+++||++.||||+|...++..
T Consensus 168 ~~R~~~~~~l~~~~~~~~~~~~~A~~~GLvD~i~~~~~~~ 207 (211)
T cd07019 168 DARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAV 207 (211)
T ss_pred hhCCCCHHHHHHhcCCcEEeHHHHHHcCCcccCCCHHHHH
Confidence 0111235567889999999999999998666544
No 205
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.28 E-value=5.3e-11 Score=131.62 Aligned_cols=243 Identities=14% Similarity=0.109 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--ccee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~t 279 (829)
...|+.+|+++||+++|+++++|+ .+++++..++|. ....+.+|...||++. +++.
T Consensus 60 ~~~la~~Aa~~aL~~a~~~~~dId----~lI~~t~t~d~~------------------~P~~a~~v~~~Lg~~~~~~~~d 117 (353)
T PRK12880 60 VSDLGKHAANTLLQGLNIDKNSLD----ALIVVTQSPDFF------------------MPSTACYLHQLLNLSSKTIAFD 117 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCcHHHHHHHHhCCCCCceEEe
Confidence 567999999999999999999998 888888776652 3456788999999963 6788
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL 359 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~ 359 (829)
|+.+|++++.||..|..+|++|..+ +|+.+.|.++.. +. ++.......+||||+|+||++.
T Consensus 118 i~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~~-----------~~-------~~d~~~~~lFGDGAaA~vl~~~ 178 (353)
T PRK12880 118 LGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLSKF-----------IH-------PKNMNLAPIFGDGVSATLIEKT 178 (353)
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhhcc-----------CC-------cccCCceeeecccceEEEEEec
Confidence 9999999999999999999999999 888888864211 11 1112234678999999999864
Q ss_pred hhhhhCCCceEEEEEEeeeecC------CCC--CCC-------------------CCCCH--------HHHHHHHHHHHH
Q psy11396 360 KDAKKDGDDIYCIIKGWGVNQD------GKT--NGI-------------------TAPNT--------KSQIRLQTKIYK 404 (829)
Q Consensus 360 ~~A~~~g~~i~a~I~g~~~~~d------g~~--~~~-------------------~~p~~--------~~~~~ai~~Al~ 404 (829)
+.. .+ + ..+...+...+ +.. ... ...++ .....+++++|+
T Consensus 179 ~~~--~~--~-~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~ 253 (353)
T PRK12880 179 DFN--EA--F-FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILE 253 (353)
T ss_pred CCC--Cc--e-EEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHH
Confidence 321 11 1 11111111000 000 000 00011 122468899999
Q ss_pred HcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCCC
Q psy11396 405 KFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPPT 484 (829)
Q Consensus 405 ~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp~ 484 (829)
++|++++|||++.+|- +...-.+++.+.++- ....++. .+-...|++.+||=...|-..+ +.+
T Consensus 254 ~~gl~~~did~~v~HQ-----~~~~i~~~i~~~Lgl---~~ek~~~-~~l~~~GNtssasip~~L~~~~---~~~----- 316 (353)
T PRK12880 254 FSKVDEKDIAFHLFHQ-----SNAYLVDCIKEELKL---NDDKVPN-FIMEKYANLSACSLPALLCELD---TPK----- 316 (353)
T ss_pred HcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCC---CHHHhhh-hhHHhhCCHHHHHHHHHHHHHH---HcC-----
Confidence 9999999999999993 344455666666652 1222221 1223468888777444444331 111
Q ss_pred CCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEeeec
Q psy11396 485 INYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLMEK 539 (829)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~e~ 539 (829)
+. .++..+||-|=+-++++|+-.
T Consensus 317 -------------------------------~~-~~ll~~~G~G~s~g~~ll~~~ 339 (353)
T PRK12880 317 -------------------------------EF-KASLSAFGAGLSWGSAVLNFK 339 (353)
T ss_pred -------------------------------Cc-EEEEEEEchhhhheEeEEEEC
Confidence 11 168889999888888888864
No 206
>PLN03169 chalcone synthase family protein; Provisional
Probab=99.28 E-value=1.3e-10 Score=130.07 Aligned_cols=227 Identities=11% Similarity=0.076 Sum_probs=140.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCc---
Q psy11396 200 DPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGP--- 276 (829)
Q Consensus 200 d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp--- 276 (829)
.....|+.+|+++||+++|+++++|+ .+++++.. +|. .+..+..|...||++..
T Consensus 104 e~~~~La~~Aa~~aL~~ag~~~~dId----~lI~~t~t-~~~------------------~P~~a~~l~~~LGl~~~~~~ 160 (391)
T PLN03169 104 EAVTQMAVEASLACIKEWGRPVSDIT----HLVYVSSS-EAR------------------LPGGDLYLAKQLGLSPDVQR 160 (391)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEECcC-CCC------------------CCcHHHHHHHHhCcCCccee
Confidence 34567999999999999999999998 77777652 331 22346689999999752
Q ss_pred ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEE
Q psy11396 277 CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLML 356 (829)
Q Consensus 277 ~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL 356 (829)
.+.+..||++++.||..|..+|++|..+.|||.++|.++... . .+. ... ++.......+||||+|+||
T Consensus 161 ~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~-----~-----~~~-~~~-~~d~~~~~lFGDGAaA~vl 228 (391)
T PLN03169 161 VMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTILGF-----R-----PPS-PDR-PYDLVGAALFGDGAAAVII 228 (391)
T ss_pred eecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcChhhc-----c-----CCC-ccc-hhhhhhhhhccCceEEEEE
Confidence 477899999999999999999999999999999999842111 0 000 000 1222345688999999999
Q ss_pred ccchhhhhCCCceEEEEEEeee----ecC----------CCC--CCCCCCC--HHHHHHHHHHHHHHcCCCCCCcc--EE
Q psy11396 357 KKLKDAKKDGDDIYCIIKGWGV----NQD----------GKT--NGITAPN--TKSQIRLQTKIYKKFNINPNDIQ--LL 416 (829)
Q Consensus 357 ~~~~~A~~~g~~i~a~I~g~~~----~~d----------g~~--~~~~~p~--~~~~~~ai~~Al~~Agl~~~dId--~v 416 (829)
+..+.... ...++ .+...+. .++ |.. .+...|. ...+..+++++|+++|++++||| ++
T Consensus 229 ~~~~~~~~-~~~~~-~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~ 306 (391)
T PLN03169 229 GADPIPVS-ESPFF-ELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFW 306 (391)
T ss_pred ecCCCccc-CCcce-EEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceE
Confidence 87543210 11111 2222111 000 000 0000011 23346678899999999999998 88
Q ss_pred EecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHH
Q psy11396 417 EAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIK 471 (829)
Q Consensus 417 e~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~ 471 (829)
-.|=.+ ..=.+++.+.++- ..+.++.+ .+-..+||+.+|+=...|-.
T Consensus 307 v~Hq~n-----~~il~~v~~~Lgl---~~ek~~~s~~~l~~~GNtsSasip~~L~~ 354 (391)
T PLN03169 307 AVHPGG-----PAILNRLEKKLKL---APEKLECSRRALMDYGNVSSNTIVYVLEY 354 (391)
T ss_pred EecCCC-----HHHHHHHHHHcCC---CHHHHHHHHHHHHHhCCchHhHHHHHHHH
Confidence 888443 3334455555541 11222211 12235799988885444433
No 207
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.26 E-value=5e-11 Score=125.63 Aligned_cols=178 Identities=16% Similarity=0.169 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceeec
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAID 281 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~ 281 (829)
...|+.+|+++||++||+++++++ .+++|+.. + ....+..++..+|+ |.+.|+
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID----~IIvGdl~-------------------~--Q~~~As~vA~~LGI--P~fdV~ 102 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVD----FFLAGDLL-------------------N--QIITANFVARDLGI--PFLGLY 102 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeCCC-------------------C--cccHHHHHHHHhCC--CEEEEe
Confidence 467999999999999999999998 77777311 0 11246678888887 889999
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccchh
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKD 361 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~ 361 (829)
++|+|++.||..|+.+|++|.+|.+||++.+...+..... +.....+. .+.......++||||+||++.+
T Consensus 103 ~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqf-----r~p~eyg~----q~~~ta~~tgdGAGA~vl~~~~- 172 (327)
T TIGR02845 103 GACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQF-----RYPTEYGV----QKPPTAQWTVTGAGAVLLASTG- 172 (327)
T ss_pred ccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhc-----cccccccc----CCCCeeeEEEcccEEEEEeecC-
Confidence 9999999999999999999999999999999865433211 11111111 1234556789999999998753
Q ss_pred hhhCCCceE----EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396 362 AKKDGDDIY----CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG 422 (829)
Q Consensus 362 A~~~g~~i~----a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg 422 (829)
.+.+|. ++|..++.. |+.. +-+--.++....|.+-|++.|.+|+|-|.|..-+-|
T Consensus 173 ---~~~~i~~~t~gkv~d~g~~-d~~n--mgaamapaa~dti~~h~~d~~~~~~~yd~i~tgdlg 231 (327)
T TIGR02845 173 ---GGPRITSATIGKVVDYGIT-DPLD--MGAAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDLA 231 (327)
T ss_pred ---CCCceEEEEEEEEEecCCC-Cccc--chhhhhHHHHHHHHHHHHHcCCChhhccEEEecchH
Confidence 233333 334444432 2221 111123456778899999999999999999975444
No 208
>PLN03173 chalcone synthase; Provisional
Probab=99.19 E-value=6.5e-10 Score=124.09 Aligned_cols=237 Identities=12% Similarity=0.103 Sum_probs=147.0
Q ss_pred CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh
Q psy11396 191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF 270 (829)
Q Consensus 191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 270 (829)
+..+......-...|+.+|+.+||+++|+++++|+ -+++.+..+ + .....+.+|...
T Consensus 91 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~li~~t~t~-~------------------~~P~~a~~l~~~ 147 (391)
T PLN03173 91 LDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT----HLVFCTTSG-V------------------DMPGADYQLTKL 147 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCC-C------------------cccHHHHHHHHH
Confidence 44444455555668999999999999999999997 666665532 1 012467789999
Q ss_pred ccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccc
Q psy11396 271 LNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVP 347 (829)
Q Consensus 271 lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~ 347 (829)
||++.- .+.+..||++++.+|..|.++++++....|||+++|.++... ..++. +..+.--....+
T Consensus 148 LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~----------~~~~d--~~~~~~v~~~LF 215 (391)
T PLN03173 148 LGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTF----------RGPSD--THLDSLVGQALF 215 (391)
T ss_pred hCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhh----------CCccc--cchhhhhhhhhh
Confidence 999763 456899999999999999999999999999999999854111 00000 000001234778
Q ss_pred ccceEEEEEccchhhhhCCCceEEEEEEeee----ecCCC----------CCC--CCCCC--HHHHHHHHHHHHHHcCCC
Q psy11396 348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWGV----NQDGK----------TNG--ITAPN--TKSQIRLQTKIYKKFNIN 409 (829)
Q Consensus 348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~~----~~dg~----------~~~--~~~p~--~~~~~~ai~~Al~~Agl~ 409 (829)
||||+|+||+..+.. ....+.+ ++.++.. .+++. ... ...|. .......++++|++.|++
T Consensus 216 GDGAaAvvl~~~~~~-~~~~~~~-~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~ 293 (391)
T PLN03173 216 GDGAAAIIIGSDPVL-GVEKPLF-ELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGIS 293 (391)
T ss_pred cCceEEEEEeCCCCC-CcCCcce-EEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999864321 0011112 3333221 11111 000 01111 234566888999999999
Q ss_pred CCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHHH
Q psy11396 410 PNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIKI 472 (829)
Q Consensus 410 ~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~ 472 (829)
++||+++-+|--|.. =.+++.+.++- ..+.+..+ .+-...|++.+||=..-|-+.
T Consensus 294 ~~di~~~v~Hqgg~~-----Il~~v~~~LgL---~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (391)
T PLN03173 294 DWNSLFWIAHPGGPA-----ILDQVEAKLAL---KPEKLRATRHVLSEYGNMSSACVLFILDEM 349 (391)
T ss_pred ccccCeEEECCCcHH-----HHHHHHHHcCC---ChHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence 999999999944433 34555555542 11111111 123346898888754444443
No 209
>PLN03168 chalcone synthase; Provisional
Probab=99.14 E-value=2.2e-09 Score=120.00 Aligned_cols=237 Identities=12% Similarity=0.119 Sum_probs=145.3
Q ss_pred CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhh
Q psy11396 191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYF 270 (829)
Q Consensus 191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 270 (829)
+..+......-...|+.+|+++||+++|+++++|+ .+++++..+ +. ....+.+|+..
T Consensus 90 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~lI~~T~Tg-~~------------------~Ps~a~~l~~~ 146 (389)
T PLN03168 90 LNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDIT----HIVFATTSG-VN------------------MPGADHALAKL 146 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCC-CC------------------CccHHHHHHHH
Confidence 34444555556668999999999999999999998 788887654 21 23357889999
Q ss_pred ccCCCc---ceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCccc
Q psy11396 271 LNLQGP---CLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVP 347 (829)
Q Consensus 271 lgl~Gp---~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~ 347 (829)
||++.- ++.++.||++++.||..|..+|++|....|||+++|.++.. +.. ++. ...+..-....+
T Consensus 147 LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~~-----~~~-----~~~--~~~~~~~~~~LF 214 (389)
T PLN03168 147 LGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAVT-----YRA-----PSE--NHLDGLVGSALF 214 (389)
T ss_pred hCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhhh-----ccC-----ccc--ccHHHHhccccc
Confidence 999752 58899999999999999999999999999999999986421 100 000 001111245778
Q ss_pred ccceEEEEEccchhhhhCCCceEEEEEEee-ee--cCCC----------CCCCCC--C--CHHHHHHHHHHHHHHcCCCC
Q psy11396 348 GEGVGVLMLKKLKDAKKDGDDIYCIIKGWG-VN--QDGK----------TNGITA--P--NTKSQIRLQTKIYKKFNINP 410 (829)
Q Consensus 348 gEGaaalvL~~~~~A~~~g~~i~a~I~g~~-~~--~dg~----------~~~~~~--p--~~~~~~~ai~~Al~~Agl~~ 410 (829)
||||+|+||+..+... ....++....... .. +++. ...+.. | -.......+.++++..++..
T Consensus 215 GDGAaAvvl~~~~~~~-~~~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~ 293 (389)
T PLN03168 215 GDGAGVYVVGSDPKPE-VEKALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPD 293 (389)
T ss_pred cCccEEEEEecCCCCc-cCCcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999999743211 0112222221111 00 1111 000000 0 01234556667777788877
Q ss_pred CCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccC-CcccCcCcchhhhhHHHHHH
Q psy11396 411 NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALG-SVKSNIGHSATAAGVIGMIK 471 (829)
Q Consensus 411 ~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~ 471 (829)
.|++++-+|=-|- .=.+++.+.++- ..+.+..+ .+-...|++-+||=...|-.
T Consensus 294 ~d~~~~v~Hqgg~-----~Il~~v~~~Lgl---~~ek~~~s~~vl~~yGNtSSaSv~~vL~~ 347 (389)
T PLN03168 294 WNEMFWAVHPGGP-----AILDQVEAKLKL---TKDKMQGSRDILSEFGNMSSASVLFVLDQ 347 (389)
T ss_pred cccceEEecCCcH-----HHHHHHHHHcCC---CHHHHHHHHHHHHHhCccHhhhHHHHHHH
Confidence 8888888994433 334555555542 11222211 12345689888874444433
No 210
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.12 E-value=8.2e-10 Score=116.84 Aligned_cols=178 Identities=16% Similarity=0.198 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceeec
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAID 281 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~ 281 (829)
...|+.+|+++||++||+++++++ .+|+|... + ....++.++..+|+ |.+.|.
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID----~lI~Gdll-------------------~--Q~~sAs~vA~~LGI--Pa~dV~ 108 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDID----YLLAGDLL-------------------N--QIISANFAARELGI--PFLGLY 108 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCC-------------------C--CcchHHHHHHHhCC--cEEEEe
Confidence 467999999999999999999998 78887321 0 11345567777876 999999
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccchh
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKD 361 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~ 361 (829)
++|+|+..||..|+.+|++|.+|.+||++.+.+.+..... +.-...+..+| ..-...+.||+|+||.+..
T Consensus 109 gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqf-----r~P~eyg~qrp----~taqwtvtGAGA~i~~~~~- 178 (337)
T PRK08304 109 GACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQF-----RFPTEYGGQRP----PTAQWTVTGAGAVLLSREG- 178 (337)
T ss_pred ccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhc-----cCchhccccCC----CcceEEeeccEEEEEecCC-
Confidence 9999999999999999999999999999999865443211 11112233333 2233468899999998642
Q ss_pred hhhCCCceE----EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396 362 AKKDGDDIY----CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG 422 (829)
Q Consensus 362 A~~~g~~i~----a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg 422 (829)
.+.+|- ++|..+++. |... +-+--.++....|.+-|++.|.+|+|-|.|..-+-|
T Consensus 179 ---~~~~i~~~t~Gkv~D~g~~-d~~n--mgaaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg 237 (337)
T PRK08304 179 ---SGPRITHATIGKVVDLGIK-DPND--MGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLG 237 (337)
T ss_pred ---CCceEEEEeEEEEEecCCC-Cccc--chhhhhHHHHHHHHHHHHHcCCChhhccEEEEcchH
Confidence 232222 233333331 2211 111123456778899999999999999999975444
No 211
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=99.12 E-value=5.8e-11 Score=116.58 Aligned_cols=136 Identities=15% Similarity=0.146 Sum_probs=103.0
Q ss_pred CcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccc
Q psy11396 584 LKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIG 663 (829)
Q Consensus 584 ~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~G 663 (829)
++++.++.+|...+..++.|+++++|+|. ..|.|+++....... ..+..++||+|+.++|.|.+
T Consensus 7 ~I~~~~~~~l~~~l~~a~~d~~~~~ivl~----~~s~Gg~~~~~~~i~------------~~l~~~~kpvva~~~g~~~s 70 (161)
T cd00394 7 VIEDVSADQLAAQIRFAEADNSVKAIVLE----VNTPGGRVDAGMNIV------------DALQASRKPVIAYVGGQAAS 70 (161)
T ss_pred EEccchHHHHHHHHHHHHhCCCCceEEEE----EECCCcCHHHHHHHH------------HHHHHhCCCEEEEECChhHH
Confidence 34567788999999999999999999997 357788775543222 12334689999999999999
Q ss_pred hhhhhhhccccccccccceeccccccccccCCCc-c------------eecc------ccccCHHHHHHHHhcCCccCHH
Q psy11396 664 AGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAG-S------------TLIF------PQRFGKILSREILFTASEFKGK 724 (829)
Q Consensus 664 gG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g-~------------~~~l------~r~iG~~~a~e~ll~g~~~~a~ 724 (829)
+|+.|+++||.|++.+++.|++.....+.....+ . ...+ .|.+......+.+..+..++++
T Consensus 71 ~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~~~~~~~~~~~~~~a~ 150 (161)
T cd00394 71 AGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTEKLEEDIEKDLVLTAQ 150 (161)
T ss_pred HHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhcCCcEEcHH
Confidence 9999999999999999999999888765432110 0 0011 1223444567888889999999
Q ss_pred HHHHcCCcccc
Q psy11396 725 ELKERGISMPV 735 (829)
Q Consensus 725 eA~~~GLv~~v 735 (829)
||+++||||+|
T Consensus 151 eA~~~GLvD~i 161 (161)
T cd00394 151 EALEYGLVDAL 161 (161)
T ss_pred HHHHcCCcCcC
Confidence 99999999986
No 212
>PLN02854 3-ketoacyl-CoA synthase
Probab=99.10 E-value=1.2e-08 Score=115.97 Aligned_cols=327 Identities=13% Similarity=0.117 Sum_probs=188.6
Q ss_pred CCCEEEEecccccCCC---CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCC
Q psy11396 114 NDDIAIIGISGQFPKA---NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFN 190 (829)
Q Consensus 114 ~~~IaItG~g~~~p~g---~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~ 190 (829)
+++|+.+-++|.-|.. .+.+.|-+....-.. +.+ +.-.+-.......|. .+-..+.+..+.
T Consensus 111 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~-~~~--------------~~~~f~~~~~~~sg~-g~~ty~P~~~~~ 174 (521)
T PLN02854 111 SKPVYLVDFACYKPEDERKISVDSFLTMTEENGS-FED--------------ETVQFQRRISTRSGL-GDETYLPRGITS 174 (521)
T ss_pred CCcEEEEeeeeecCCccccccHHHHHHHHHHcCC-CCH--------------HHHHHHHHHHHhcCC-CCccccCccccC
Confidence 4689999999999984 477777776654311 111 000000001111111 111223334444
Q ss_pred CCHH--HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh
Q psy11396 191 ISPS--EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS 268 (829)
Q Consensus 191 i~p~--~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 268 (829)
++|. ......-.......++.++|+++|+++++|+ -+++.++ +++ ....++.+|.
T Consensus 175 ~~~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID----~LIv~cS-~~~------------------p~PSlAa~I~ 231 (521)
T PLN02854 175 RPPNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIG----ILIVNCS-LFN------------------PTPSLSAMIV 231 (521)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECC-CCC------------------CCCCHHHHHH
Confidence 5543 2233334456777889999999999999997 6666432 222 1235678899
Q ss_pred hhccCCC--cceeec-cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC--
Q psy11396 269 YFLNLQG--PCLAID-TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN-- 343 (829)
Q Consensus 269 ~~lgl~G--p~~tv~-~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~-- 343 (829)
..||++. .++.++ .||++++.||..|.++|++|....+||+++|.++..+ .+-+....
T Consensus 232 n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S~~~-----------------y~g~Drs~lv 294 (521)
T PLN02854 232 NHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENITLNW-----------------YFGNDRSMLL 294 (521)
T ss_pred HHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeeecCC-----------------CCCCchhhhc
Confidence 9999973 578888 8999999999999999999999999999999864110 00011122
Q ss_pred -CcccccceEEEEEccchhhhhC-CCceEEEEEEeeeecCCC-----------------CCCCCCCC--HHH--------
Q psy11396 344 -GFVPGEGVGVLMLKKLKDAKKD-GDDIYCIIKGWGVNQDGK-----------------TNGITAPN--TKS-------- 394 (829)
Q Consensus 344 -G~~~gEGaaalvL~~~~~A~~~-g~~i~a~I~g~~~~~dg~-----------------~~~~~~p~--~~~-------- 394 (829)
.+.+||||||+||++.+....+ ..+....+ .+...+|+. ..+...|. +..
T Consensus 295 ~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v-~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~ 373 (521)
T PLN02854 295 CNCIFRMGGAAVLLSNKARDRKRSKYQLVHTV-RTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTL 373 (521)
T ss_pred ceeeeccceeEEEEecccccccccchheeeEE-EEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhc
Confidence 4678999999999874321110 11111111 111111110 00000000 000
Q ss_pred -------------HHHHHHHHHHHcCCCC------CCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCccc
Q psy11396 395 -------------QIRLQTKIYKKFNINP------NDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKS 455 (829)
Q Consensus 395 -------------~~~ai~~Al~~Agl~~------~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~ 455 (829)
....+++.|.++|+++ .|||++..|.-|.. =.+++.+.++-...+.+ +.-..-.
T Consensus 374 g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~-----IId~v~k~LgL~~~~~e--~sr~tL~ 446 (521)
T PLN02854 374 GPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRA-----VLDELQKNLQLSDWHME--PSRMTLH 446 (521)
T ss_pred cccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHH-----HHHHHHHHcCCCccccc--chHHHhh
Confidence 2456788888999987 69999999955543 34555655552111111 1112223
Q ss_pred CcCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEE
Q psy11396 456 NIGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIV 535 (829)
Q Consensus 456 ~~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~v 535 (829)
.+|++.+||=...|..+. +.|.+ ++..+++.-+||.|=+-.++|
T Consensus 447 rfGNTSSASI~~~L~~~~---~kGri---------------------------------k~GD~Vl~iaFGsGft~~sav 490 (521)
T PLN02854 447 RFGNTSSSSLWYELAYTE---AKGRV---------------------------------SAGDRVWQIAFGSGFKCNSAV 490 (521)
T ss_pred hcCChHhhHHHHHHHHHH---HcCCC---------------------------------CCCCEEEEEEEchhhhhhhee
Confidence 458888877444444432 23222 123568889999887777788
Q ss_pred eeecc
Q psy11396 536 LMEKI 540 (829)
Q Consensus 536 l~e~~ 540 (829)
++--.
T Consensus 491 ~~~~~ 495 (521)
T PLN02854 491 WKALR 495 (521)
T ss_pred eEEec
Confidence 87543
No 213
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=99.07 E-value=4.3e-09 Score=117.76 Aligned_cols=214 Identities=14% Similarity=0.101 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--cceee
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCLAI 280 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~tv 280 (829)
..|+++|+++||+++ ++++|+ .+++++..+.+. ....+..|...||+++ +++.+
T Consensus 50 ~~la~~Aa~~aL~~a--~~~~Id----~li~~t~s~~~~------------------~~s~a~~v~~~Lgl~~~~~~~dv 105 (379)
T TIGR01835 50 VTMAASAAKPILDRN--DKQKID----MVIFGTESGIDQ------------------SKAAAVYVHGLLGLQPFCRSFEL 105 (379)
T ss_pred HHHHHHHHHHHHHhC--CHhhCC----EEEEEeCCCCCC------------------CCCHHHHHHHHhCCCCCceEEEe
Confidence 579999999999998 677887 778887654431 2236778999999964 78889
Q ss_pred ccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccch
Q psy11396 281 DTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLK 360 (829)
Q Consensus 281 ~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~ 360 (829)
..+|++++.||..|.++|++|..+.+||.++|..... . ....-...||||+|+||++..
T Consensus 106 ~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~~-------------~--------~~~~~~~~GdGA~A~Ll~~~~ 164 (379)
T TIGR01835 106 KQACYGATAALQMAKGHVALSPDRKVLVIASDIAKYG-------------L--------ESPGEPTQGAGAVAMLVSADP 164 (379)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhcc-------------c--------CCCCCccccCccEEEEEecCC
Confidence 9999999999999999999999999999999862100 0 011124579999999998631
Q ss_pred hhhhCCCceEEEEEEeeeecCC-C----CCCCCCC--C--------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC
Q psy11396 361 DAKKDGDDIYCIIKGWGVNQDG-K----TNGITAP--N--------TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKL 425 (829)
Q Consensus 361 ~A~~~g~~i~a~I~g~~~~~dg-~----~~~~~~p--~--------~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~ 425 (829)
.+...-.+....++. . ..+...| + ......++++.+++.|++++|||++..|-..++.
T Consensus 165 -------~i~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~ 237 (379)
T TIGR01835 165 -------KLLAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKM 237 (379)
T ss_pred -------CeeEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcH
Confidence 222111111111111 0 0011111 1 1234578888899999999999999999765554
Q ss_pred CChHHHHHHHHHhcccCCCC-Cccc-----cCCcccCcCcchhhhhHHHHHHH
Q psy11396 426 GDPIEFEALCESFNKFSYHK-NFCA-----LGSVKSNIGHSATAAGVIGMIKI 472 (829)
Q Consensus 426 gD~~E~~Al~~~~~~~~~~~-~~~~-----v~s~k~~~GH~~gAsG~~~li~~ 472 (829)
.- +++.+++....... +.+. -...-..+||+.+|+=...|..+
T Consensus 238 ~~----k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~ 286 (379)
T TIGR01835 238 GL----KALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASL 286 (379)
T ss_pred HH----HHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHH
Confidence 21 22222222111000 0000 00123368999999866666655
No 214
>PLN02377 3-ketoacyl-CoA synthase
Probab=99.04 E-value=3.2e-08 Score=112.53 Aligned_cols=189 Identities=13% Similarity=0.154 Sum_probs=121.5
Q ss_pred CCCEEEEecccccCCC---CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCC
Q psy11396 114 NDDIAIIGISGQFPKA---NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFN 190 (829)
Q Consensus 114 ~~~IaItG~g~~~p~g---~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~ 190 (829)
+++|+.+-++|.-|.. .+.+.|-+....-. .+.+ +.+ ..-+......|. .+-..+.+..+.
T Consensus 95 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~-~~~~--------~~~------~f~~ri~~~sgi-g~~t~~p~~~~~ 158 (502)
T PLN02377 95 PRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTG-DFDD--------SSL------EFQRKILERSGL-GEDTYVPEAMHY 158 (502)
T ss_pred CCCEEEEeeeeecCCccccccHHHHHHHHHHhC-CCCH--------HHH------HHHHHHHHhcCC-CCccccCchhcc
Confidence 4689999999999984 46777776665331 1111 000 000000111111 111112222222
Q ss_pred CCHH--HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh
Q psy11396 191 ISPS--EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS 268 (829)
Q Consensus 191 i~p~--~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 268 (829)
++|. ......-...++..|+.+||+++|+++++|+ -+++ +..+.+ ....++..|.
T Consensus 159 ~~~~~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID----~LVv-~cS~~~------------------~~PSlaa~V~ 215 (502)
T PLN02377 159 IPPRPSMAAAREEAEQVMFGALDNLFANTNVNPKDIG----ILVV-NCSLFN------------------PTPSLSAMIV 215 (502)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEE-ECCCCC------------------CCCcHHHHHH
Confidence 3332 2333344567999999999999999999997 5555 333221 1234678899
Q ss_pred hhccCCC--cceeec-cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC--
Q psy11396 269 YFLNLQG--PCLAID-TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN-- 343 (829)
Q Consensus 269 ~~lgl~G--p~~tv~-~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~-- 343 (829)
..||++. .++.++ .||++++.||..|.++|++|....|||+++|.++..+. ++.+..
T Consensus 216 ~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~------------------~~d~~s~l 277 (502)
T PLN02377 216 NKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWY------------------FGNKKSML 277 (502)
T ss_pred HHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccccccC------------------CCCCcccc
Confidence 9999974 688899 69999999999999999999999999999998642210 111222
Q ss_pred --CcccccceEEEEEccc
Q psy11396 344 --GFVPGEGVGVLMLKKL 359 (829)
Q Consensus 344 --G~~~gEGaaalvL~~~ 359 (829)
.+.+||||||+||++.
T Consensus 278 v~n~LFgDGAaAvlLs~~ 295 (502)
T PLN02377 278 IPNCLFRVGGSAVLLSNK 295 (502)
T ss_pred ccceeeccccEEEEEecc
Confidence 3678999999999874
No 215
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=99.04 E-value=1e-08 Score=115.54 Aligned_cols=176 Identities=12% Similarity=0.056 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh---hhccCCC-cc
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS---YFLNLQG-PC 277 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia---~~lgl~G-p~ 277 (829)
..-|+++|++.||+++|+++++|+ -+++||..+.+. ....+..|. ..+|.+. ++
T Consensus 53 ~~tmA~~AA~~aL~~agid~~~Id----llivaTeT~~d~------------------~ps~A~~v~~ll~~LG~~~~~a 110 (459)
T PLN02577 53 VISMSLTVVKSLLEKYNIDPKQIG----RLEVGSETVIDK------------------SKSIKTFLMQLFEESGNTDIEG 110 (459)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCchHHHHHHHHHHhCCCCcEE
Confidence 346999999999999999999998 889998765432 122344443 4456643 67
Q ss_pred eeeccchhhHHHHHHHHHHHHHcCCC--CEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEE
Q psy11396 278 LAIDTACSSSLVAIAHACDSLILGNS--KIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLM 355 (829)
Q Consensus 278 ~tv~~acsSgl~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalv 355 (829)
+-+..+|+++..||..|..+|++|.. +.+||+|+|...... + | . + ..-|+||+|+|
T Consensus 111 fDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~--------~---------~-~-e---~t~GdGA~A~l 168 (459)
T PLN02577 111 VDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAE--------G---------P-A-R---PTGGAGAVAML 168 (459)
T ss_pred eehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccC--------C---------C-C-C---CCCCcceEEEE
Confidence 88999999999999999999999985 999999999742110 0 0 0 1 12299999999
Q ss_pred EccchhhhhCCCceEEEEEEeeee--cCCCCCC--CCCC--C----H----HHHHHHHHHHHHHc------CCCCCCccE
Q psy11396 356 LKKLKDAKKDGDDIYCIIKGWGVN--QDGKTNG--ITAP--N----T----KSQIRLQTKIYKKF------NINPNDIQL 415 (829)
Q Consensus 356 L~~~~~A~~~g~~i~a~I~g~~~~--~dg~~~~--~~~p--~----~----~~~~~ai~~Al~~A------gl~~~dId~ 415 (829)
|+..+. + .+-....|.... .|-..+. ...| + . .....+.++.+++. |++++|+||
T Consensus 169 v~~~~~----~-~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d~d~ 243 (459)
T PLN02577 169 VGPNAP----I-VFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISDADY 243 (459)
T ss_pred EccCCC----c-eeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHcCE
Confidence 985321 1 010011122211 0000000 0001 1 1 12233444444444 888999999
Q ss_pred EEecCCCCCCC
Q psy11396 416 LEAHGTGTKLG 426 (829)
Q Consensus 416 ve~hgtgt~~g 426 (829)
+..|-..+++.
T Consensus 244 ~vfHqP~~km~ 254 (459)
T PLN02577 244 FVFHAPYNKLV 254 (459)
T ss_pred EEecCCccchh
Confidence 99998877663
No 216
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=99.03 E-value=1.7e-10 Score=113.02 Aligned_cols=128 Identities=16% Similarity=0.130 Sum_probs=91.8
Q ss_pred cccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhhh
Q psy11396 589 VVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAM 668 (829)
Q Consensus 589 ~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~l 668 (829)
+.+++...+..++.+..+ .+.|.+. |+++..-.. ....+..+|||+|+.++|.|.++|+.+
T Consensus 16 ~~~~~~~~l~~~~~~~~i-~l~insp------GG~~~~~~~------------i~~~i~~~~~pvi~~v~g~a~s~g~~i 76 (160)
T cd07016 16 TAKEFKDALDALGDDSDI-TVRINSP------GGDVFAGLA------------IYNALKRHKGKVTVKIDGLAASAASVI 76 (160)
T ss_pred CHHHHHHHHHhccCCCCE-EEEEECC------CCCHHHHHH------------HHHHHHhcCCCEEEEEcchHHhHHHHH
Confidence 455666777777766333 4445543 444433221 122233479999999999999999999
Q ss_pred hhccccccccccceeccccccccccCCCc---------------ceeccccccC--HHHHHHHHhcCCccCHHHHHHcCC
Q psy11396 669 GLFCDYTIFSEESVYQSPYMRYGFTPGAG---------------STLIFPQRFG--KILSREILFTASEFKGKELKERGI 731 (829)
Q Consensus 669 al~cD~~ia~~~a~f~~~e~~~Gl~p~~g---------------~~~~l~r~iG--~~~a~e~ll~g~~~~a~eA~~~GL 731 (829)
+++||+|+++++++|++.....+..+... ....+.+..| .....+++..+..++++||+++||
T Consensus 77 a~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~a~eA~~~Gl 156 (160)
T cd07016 77 AMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWLTAQEAVELGF 156 (160)
T ss_pred HhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeECcHHHHHHcCC
Confidence 99999999999999999777655543321 1223667778 677788877778899999999999
Q ss_pred cccc
Q psy11396 732 SMPV 735 (829)
Q Consensus 732 v~~v 735 (829)
||+|
T Consensus 157 iD~v 160 (160)
T cd07016 157 ADEI 160 (160)
T ss_pred CCcC
Confidence 9986
No 217
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=99.02 E-value=1.4e-10 Score=135.62 Aligned_cols=151 Identities=16% Similarity=0.149 Sum_probs=113.2
Q ss_pred cccccchhhhcccccceeeeeeCC---CCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhh
Q psy11396 591 KGITDAFSYINSSVQYKVIIITGY---ENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWA 667 (829)
Q Consensus 591 ~eL~~~l~~~~~d~~vr~vVl~g~---g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~ 667 (829)
+.+...++.+++|+++++|||+-. |..|++ | ...+ .+......+||+|+.++|.|.+||..
T Consensus 332 ~~~~~~l~~a~~D~~VkaIVLrinSpGGs~~as--e-----~i~~---------~i~~~~~~gKPVva~~~g~aaSggY~ 395 (584)
T TIGR00705 332 DTVAALLRVARSDPDIKAVVLRINSPGGSVFAS--E-----IIRR---------ELARAQARGKPVIVSMGAMAASGGYW 395 (584)
T ss_pred HHHHHHHHHHhhCCCceEEEEEecCCCCCHHHH--H-----HHHH---------HHHHHHhCCCcEEEEECCccccHHHH
Confidence 456677888999999999999843 233332 1 1111 11112236799999999999999999
Q ss_pred hhhcccccccccccee------cccc------ccccccCCCcceecccc----------------------------ccC
Q psy11396 668 MGLFCDYTIFSEESVY------QSPY------MRYGFTPGAGSTLIFPQ----------------------------RFG 707 (829)
Q Consensus 668 lal~cD~~ia~~~a~f------~~~e------~~~Gl~p~~g~~~~l~r----------------------------~iG 707 (829)
++++||.+++++.+.+ +.+. .++|+.+....+..+.+ +++
T Consensus 396 iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~s~~~~~t~~~~~~~~~~l~~~y~~F~~~Va 475 (584)
T TIGR00705 396 IASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANVSLLRPLTAEDQAIMQLSVEAGYRRFLSVVS 475 (584)
T ss_pred HHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999876 5442 57899987776665554 555
Q ss_pred HHH-----HHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcC-CHHHHH
Q psy11396 708 KIL-----SREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLL-SKKELE 761 (829)
Q Consensus 708 ~~~-----a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~-~~~a~~ 761 (829)
..+ ..+.+.+|+.|+++||+++||||++. .+ +++.+.+.+++.. ++..+.
T Consensus 476 ~~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~ig---~~-~~Ai~~a~~la~~~~~~~v~ 531 (584)
T TIGR00705 476 AGRNLTPTQVDKVAQGRVWTGEDAVSNGLVDALG---GL-DEAVAKAAKLAHCREQWSVE 531 (584)
T ss_pred hhCCCCHHHHHHHHhCCCcCHHHHHHcCCcccCC---CH-HHHHHHHHHHcCCCCCceEE
Confidence 555 77788999999999999999999994 44 6677888888887 554444
No 218
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=99.00 E-value=3.8e-10 Score=115.97 Aligned_cols=142 Identities=16% Similarity=0.172 Sum_probs=97.1
Q ss_pred cccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccch
Q psy11396 585 KNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGA 664 (829)
Q Consensus 585 ~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~Gg 664 (829)
.+..++.+|.++++.+++|+++++|||+ .+|.|+++........ .+..... +||+||+++|.|.|+
T Consensus 22 ~~~~~~~~l~~~l~~a~~d~~i~~Vvl~----~~s~gg~~~~~~~l~~---------~l~~~~~-~KpViA~v~g~a~s~ 87 (214)
T cd07022 22 SGLTSYEGIAAAIRAALADPDVRAIVLD----IDSPGGEVAGVFELAD---------AIRAARA-GKPIVAFVNGLAASA 87 (214)
T ss_pred CCcccHHHHHHHHHHHhhCCCCcEEEEE----EeCCCCcHHHHHHHHH---------HHHHHhc-CCCEEEEECCchhhH
Confidence 3456789999999999999999999997 4667777654322111 1111112 599999999999999
Q ss_pred hhhhhhccccccccccceecccccc------------ccccCCCcc--ee------------------------------
Q psy11396 665 GWAMGLFCDYTIFSEESVYQSPYMR------------YGFTPGAGS--TL------------------------------ 700 (829)
Q Consensus 665 G~~lal~cD~~ia~~~a~f~~~e~~------------~Gl~p~~g~--~~------------------------------ 700 (829)
|+.++++||++++++++.|+...+. +|+-+..-- .+
T Consensus 88 gy~lA~~aD~i~a~~~a~~g~iG~~~~~~~~~~ll~k~Gi~~~~~~~g~~K~~~~~~~~~s~~~re~~~~~l~~~~~~f~ 167 (214)
T cd07022 88 AYWIASAADRIVVTPTAGVGSIGVVASHVDQSKALEKAGLKVTLIFAGAHKVDGNPDEPLSDEARARLQAEVDALYAMFV 167 (214)
T ss_pred HHHHHhcCCEEEEcCCCeEEeeeEEEecCCHHHHHHhCCCeEEEEEcCCCccCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999997654333 232211100 00
Q ss_pred -cc--ccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHH
Q psy11396 701 -IF--PQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVL 742 (829)
Q Consensus 701 -~l--~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~ 742 (829)
.+ .|.+......+++ |+.|++++|++.||||++...+++.
T Consensus 168 ~~V~~~R~~~~~~~~~~~--~~~~~~~~Al~~gLvD~i~~~~~~~ 210 (214)
T cd07022 168 AAVARNRGLSAAAVRATE--GGVFRGQEAVAAGLADAVGTLDDAL 210 (214)
T ss_pred HHHHHhCCCCHHHHHHhh--cCeeeHHHHHHcCCCcccCCHHHHH
Confidence 00 0112222333444 9999999999999999998766654
No 219
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=98.96 E-value=3.7e-08 Score=106.01 Aligned_cols=214 Identities=18% Similarity=0.218 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcc--ee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPC--LA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~--~t 279 (829)
..-|+++|++++|.++++++..|. .|++|+..+.+.. -..+..|+..||+.--+ +-
T Consensus 51 ~vTmaveAA~~~l~r~~~D~~~Ig----~v~vgTES~~d~~------------------K~~at~v~~~lg~~~~~~~~d 108 (377)
T COG3425 51 AVTMAVEAARNALKRADIDPSKIG----AVIVGSESGPDAV------------------KPTATIVAEALGLNPSARAAD 108 (377)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCc----eEEEecCCCcccc------------------cchHHHHHHHhCCCCceehhh
Confidence 345999999999999999988887 8999987765531 23567788999996433 33
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccc
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKL 359 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~ 359 (829)
+..+|-+|..||..|..+|.+|..+.+||.|.|...... + +.--..-|.|++|+|+..-
T Consensus 109 ~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~--------~-------------~~~E~t~GAGavA~lIg~n 167 (377)
T COG3425 109 VEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAP--------G-------------DALEYTAGAGAVAFLIGKN 167 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccCC--------C-------------cccCccCCCceEEEEEccC
Confidence 889999999999999999999999999999999742110 0 0111346899999999852
Q ss_pred hhhhhCCCceEEEEEEeeeec-CCC----CCCCCCCC----------HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC
Q psy11396 360 KDAKKDGDDIYCIIKGWGVNQ-DGK----TNGITAPN----------TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK 424 (829)
Q Consensus 360 ~~A~~~g~~i~a~I~g~~~~~-dg~----~~~~~~p~----------~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~ 424 (829)
.++.+++.+.+... |-. ....+.|. ......+.+..+++.|++|+|.||+..|-+.+.
T Consensus 168 -------~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k 240 (377)
T COG3425 168 -------PPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGK 240 (377)
T ss_pred -------CCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCc
Confidence 34556665555432 211 11122222 234566777778899999999999999988776
Q ss_pred CCChHHHHHHHHHhcccCCCCCccccCC-cccCcCcchhhhhHHHHHHHH
Q psy11396 425 LGDPIEFEALCESFNKFSYHKNFCALGS-VKSNIGHSATAAGVIGMIKII 473 (829)
Q Consensus 425 ~gD~~E~~Al~~~~~~~~~~~~~~~v~s-~k~~~GH~~gAsG~~~li~~~ 473 (829)
. =..++..+.-. .+.+.-+- ....+|.+..+|..++|+.++
T Consensus 241 ~----~~ka~k~l~~~----~e~v~~~l~~~~~vGN~YtgS~~L~Las~L 282 (377)
T COG3425 241 F----PKKAAKSLGFK----EEQVKPGLVYPQRIGNTYTGSLLLGLASLL 282 (377)
T ss_pred h----HHHHHHHhCcc----HhhcCccchhhhhcCcccchhHHHHHHHHH
Confidence 5 22333332211 11111222 223689999999999998875
No 220
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=98.90 E-value=1.7e-09 Score=110.81 Aligned_cols=141 Identities=13% Similarity=0.114 Sum_probs=98.4
Q ss_pred cccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhh
Q psy11396 587 STVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGW 666 (829)
Q Consensus 587 ~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~ 666 (829)
+.++.+|...++.+++|+++++||+++ +|.|+|+....... ..+..+..++||+||+++|.|.|+|+
T Consensus 16 ~~~~~~l~~~l~~a~~d~~i~~ivl~~----~s~Gg~~~~~~~i~---------~~i~~~~~~~kpvia~v~g~~~s~g~ 82 (208)
T cd07023 16 GIGADSLIEQLRKAREDDSVKAVVLRI----NSPGGSVVASEEIY---------REIRRLRKAKKPVVASMGDVAASGGY 82 (208)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEEE----ECCCCCHHHHHHHH---------HHHHHHHhcCCcEEEEECCcchhHHH
Confidence 568899999999999999999999986 68899886532211 11222334799999999999999999
Q ss_pred hhhhccccccccccceecccccc------------ccccCCCcce--------e---------------------cc---
Q psy11396 667 AMGLFCDYTIFSEESVYQSPYMR------------YGFTPGAGST--------L---------------------IF--- 702 (829)
Q Consensus 667 ~lal~cD~~ia~~~a~f~~~e~~------------~Gl~p~~g~~--------~---------------------~l--- 702 (829)
.++++||++++++++.|+...+. +|+-+..... . .+
T Consensus 83 ~lA~aaD~i~a~~~s~~g~iG~~~~~~~~~~~l~k~Gi~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~~~~f~~~ 162 (208)
T cd07023 83 YIAAAADKIVANPTTITGSIGVIGQGPNLEELLDKLGIERDTIKSGPGKDKGSPDRPLTEEERAILQALVDDIYDQFVDV 162 (208)
T ss_pred HHHhhCCEEEECCCCeEEeCcEEEecCCHHHHHHhcCCceEEEecCCCccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988643222 3333321100 0 00
Q ss_pred ---ccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhH
Q psy11396 703 ---PQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQV 741 (829)
Q Consensus 703 ---~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l 741 (829)
.|.+..... +-++.|..|++++|++.||||++...++.
T Consensus 163 Va~~R~~~~~~~-~~~~~~~~~~a~~A~~~gLiD~i~~~~~~ 203 (208)
T cd07023 163 VAEGRGMSGERL-DKLADGRVWTGRQALELGLVDELGGLDDA 203 (208)
T ss_pred HHhcCCCCHHHH-HHhcCCcEEEHHHHHHcCCCcccCCHHHH
Confidence 000111112 23567888999999999999999865544
No 221
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=98.88 E-value=2e-09 Score=99.16 Aligned_cols=120 Identities=13% Similarity=0.173 Sum_probs=79.0
Q ss_pred ceEEEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCc
Q psy11396 368 DIYCIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNF 447 (829)
Q Consensus 368 ~i~a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~ 447 (829)
+|+++|.+++.......... .+...+++++|+++|++++|||++|.|..++.. +...++ .++- ..
T Consensus 2 ~pla~i~~~~~~~~~P~~~~-----~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~----~l~~~~-~lg~-----~~ 66 (123)
T PF02803_consen 2 KPLARIVGYASAGVDPEDMG-----LGPVPAARKALERAGLTPDDIDVIEINEAFAAQ----VLAFLE-ALGL-----DP 66 (123)
T ss_dssp -ESEEEEEEEEEE--GGGGG-----GTHHHHHHHHHHHHT--GGGESEEEE--SBHHH----HHHHHH-HHTT-----GG
T ss_pred CeEEEEEEEEEEecCHHHhC-----chHHHHHHHHHHHhCCCccccchhhccchhhhH----HHHhhc-cccc-----cc
Confidence 57899999987654332222 234679999999999999999999999554422 222222 2331 11
Q ss_pred cccCCcccC--cCcchhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEecc
Q psy11396 448 CALGSVKSN--IGHSATAAGVIGMIKIILSLKHKVLPPTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSF 525 (829)
Q Consensus 448 ~~v~s~k~~--~GH~~gAsG~~~li~~~l~L~~~~ipp~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~ 525 (829)
.+|+...+. +|||.||||+..++.++.+|+++ ..++++++..
T Consensus 67 ~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~~~------------------------------------~~~~gla~~~ 110 (123)
T PF02803_consen 67 EKVNPNGGALALGHPLGASGARLVVELAHQLRRR------------------------------------GGRYGLAAIC 110 (123)
T ss_dssp GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHHHH------------------------------------TTSEEEEEEE
T ss_pred cccCcccccccccccccccccchhhhhHHHHHHh------------------------------------chhhhhHHhc
Confidence 344444443 59999999999999999999762 2356888888
Q ss_pred CCCCceEEEEeee
Q psy11396 526 GFSGTNAHIVLME 538 (829)
Q Consensus 526 G~gG~na~~vl~e 538 (829)
+-||...++|||.
T Consensus 111 ~ggG~g~a~ller 123 (123)
T PF02803_consen 111 AGGGQGSAVLLER 123 (123)
T ss_dssp ETTTEEEEEEEEE
T ss_pred ccceeeEEEEEEC
Confidence 8899999999984
No 222
>PRK12404 stage V sporulation protein AD; Provisional
Probab=98.87 E-value=3.7e-08 Score=103.71 Aligned_cols=178 Identities=17% Similarity=0.192 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceeec
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAID 281 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~ 281 (829)
...|+.+|+.+||++||+++++|+ .+|+|+..+ ....++.++..+|+ |.+.|.
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID----~i~vGdL~n---------------------Q~ipssfvar~LGI--P~~gV~ 106 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQ----FFLAGDLMN---------------------QITPTSFAARTLGI--PYLGLF 106 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCC---------------------CcCcHHHHHHHhCC--Ccccee
Confidence 457999999999999999999998 788875431 11233467777774 789999
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccchh
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKD 361 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~ 361 (829)
++|||+..||..|+.+|++|.+|.+||+-.....+.... -+.-...+.-||.... ..--|+|++||.+..
T Consensus 107 gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErq-----fR~P~eyG~Qrp~taq----wTvTgaga~~l~~~~- 176 (334)
T PRK12404 107 GACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQ-----FRYPTEYGGQKPPTAQ----WTVTGAGAAILSKTG- 176 (334)
T ss_pred ecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhh-----ccCcccccCcCCCccc----EEEEceEEEEEecCC-
Confidence 999999999999999999999999999988765443321 1222233444553321 123468888887531
Q ss_pred hhhCCCceE----EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q psy11396 362 AKKDGDDIY----CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTG 422 (829)
Q Consensus 362 A~~~g~~i~----a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtg 422 (829)
.+.+|. ++|..+++. |... +-+--.++....|.+-|++.|.+|+|-|.|..-+-|
T Consensus 177 ---~~~~i~~~T~Gkv~D~g~~-d~~n--MGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg 235 (334)
T PRK12404 177 ---DGPRVTSATIGRVVDMGLT-DPFN--MGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLG 235 (334)
T ss_pred ---CCceEEEEEEEEEEecCCC-Cccc--chhhhhHHHHHHHHHHHHHhCCChhhccEEEEcchH
Confidence 233332 233333331 2211 111123456778899999999999999999975443
No 223
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=98.86 E-value=2.2e-07 Score=104.84 Aligned_cols=176 Identities=14% Similarity=0.090 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhcc---CCC-cc
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLN---LQG-PC 277 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg---l~G-p~ 277 (829)
...|++.|+..+|+++|+++++|+ -+++|+..+.+. ....+..|...|+ .+. .+
T Consensus 50 ~~tma~~AA~~lL~~a~id~~~Id----~Liv~TeS~~d~------------------sps~a~~v~~lL~~lG~~~~~~ 107 (454)
T TIGR01833 50 INSLCLTVVSKLMERYNIDYNQIG----RLEVGTETIIDK------------------SKSVKTVLMQLFEESGNTDVEG 107 (454)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------CCchHHHHHHHHHhcCCCCceE
Confidence 456999999999999999999998 888888776553 1224555666444 432 57
Q ss_pred eeeccchhhHHHHHHHHHHHHHcCCC--CEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEE
Q psy11396 278 LAIDTACSSSLVAIAHACDSLILGNS--KIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLM 355 (829)
Q Consensus 278 ~tv~~acsSgl~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalv 355 (829)
+-+..+|+++..||..|..+|++|.. +.+||++.|...... +.. -...|+||+|+|
T Consensus 108 fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~~--------------~~~--------~~t~GaGAvAmL 165 (454)
T TIGR01833 108 IDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAK--------------GNA--------RPTGGAGAVAML 165 (454)
T ss_pred EeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccccccC--------------CCe--------eeccccceEEEE
Confidence 78999999999999999999999974 999999999832110 001 113499999999
Q ss_pred EccchhhhhCCCceEEEEEEeeeecCC--CCCCCC--CC------CHHHHHHHHHHHH-----------HHc----CCCC
Q psy11396 356 LKKLKDAKKDGDDIYCIIKGWGVNQDG--KTNGIT--AP------NTKSQIRLQTKIY-----------KKF----NINP 410 (829)
Q Consensus 356 L~~~~~A~~~g~~i~a~I~g~~~~~dg--~~~~~~--~p------~~~~~~~ai~~Al-----------~~A----gl~~ 410 (829)
|.+... ..-+. .+.++.+.... ..+... .| +.....+++.++| +++ +..+
T Consensus 166 v~~~~~-~~~~~----~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~ 240 (454)
T TIGR01833 166 IGPNAP-IVFER----GLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL 240 (454)
T ss_pred eccCcc-ceecC----ccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH
Confidence 985432 11111 11222222111 111111 11 2233445544443 333 5788
Q ss_pred CCccEEEecCCCCCCC
Q psy11396 411 NDIQLLEAHGTGTKLG 426 (829)
Q Consensus 411 ~dId~ve~hgtgt~~g 426 (829)
+|+||+..|-..+++.
T Consensus 241 ~dfd~~~fH~P~~km~ 256 (454)
T TIGR01833 241 NDFDYMVFHSPYCKLV 256 (454)
T ss_pred hHcCEEeccCCcccHH
Confidence 9999999998888763
No 224
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=98.83 E-value=3.2e-09 Score=108.47 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=97.6
Q ss_pred ccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccC--CCCEEEEecccccchhhh
Q psy11396 590 VKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYC--KIPVIAAMQGHAIGAGWA 667 (829)
Q Consensus 590 ~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~--~kp~Iaav~G~a~GgG~~ 667 (829)
..+|.+.++.+.+|+++++|||+. .|.|+++........ .+..+ +||+||.++|.|.++|+.
T Consensus 15 ~~~l~~~l~~a~~d~~i~~vvl~~----~s~Gg~~~~~~~l~~------------~i~~~~~~kpvia~v~g~a~s~g~~ 78 (207)
T TIGR00706 15 PEDFDKKIKRIKDDKSIKALLLRI----NSPGGTVVASEEIYE------------KLKKLKAKKPVVASMGGVAASGGYY 78 (207)
T ss_pred HHHHHHHHHHHhhCCCccEEEEEe----cCCCCCHHHHHHHHH------------HHHHhcCCCCEEEEECCccchHHHH
Confidence 467888899999999999999985 477888755433221 12223 599999999999999999
Q ss_pred hhhccccccccccceecccccc------------ccccCCC---------ccee--------------------------
Q psy11396 668 MGLFCDYTIFSEESVYQSPYMR------------YGFTPGA---------GSTL-------------------------- 700 (829)
Q Consensus 668 lal~cD~~ia~~~a~f~~~e~~------------~Gl~p~~---------g~~~-------------------------- 700 (829)
++++||.+++++++.|+...+. +|+-+.. +..+
T Consensus 79 la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~~~~f~~~v 158 (207)
T TIGR00706 79 IAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGSPTRELTPEERDILQNLVNESYEQFVQVV 158 (207)
T ss_pred HHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887664332 2332100 0000
Q ss_pred ccccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHH
Q psy11396 701 IFPQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLK 747 (829)
Q Consensus 701 ~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~ 747 (829)
.-.|.+......+ ++.++.|++++|++.||||++...+++.+...+
T Consensus 159 a~~R~~~~~~~~~-~~~~~~~~~~~A~~~gLvD~i~~~~~~~~~~~~ 204 (207)
T TIGR00706 159 AKGRNLPVEDVKK-FADGRVFTGRQALKLRLVDKLGTEDDALKWLAE 204 (207)
T ss_pred HhcCCCCHHHHHH-HhcCCcccHHHHHHcCCCcccCCHHHHHHHHHH
Confidence 0012222223333 467899999999999999999877776654443
No 225
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.82 E-value=7.7e-09 Score=109.67 Aligned_cols=94 Identities=23% Similarity=0.372 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccC--CCccee
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNL--QGPCLA 279 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl--~Gp~~t 279 (829)
...|+.++++++|+++|+++++++ .|++|+..+.. ....++..++...|| .-|.++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id----~v~~G~~~~~~------------------~g~~~ar~~~l~aGl~~~vp~~~ 83 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDID----AVIVGNVLQEG------------------EGQNIARQAALAAGLPESVPATT 83 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEE----EEEEE-SSSCT------------------TTCHHHHHHHHHTTS-TTSEEEE
T ss_pred HHHHHHHHHHHHHHhcccchhhhh----hcCcccccccc------------------cchhhhhhhhhhcccccccceee
Confidence 456889999999999999999998 78888654321 122345566677777 359999
Q ss_pred eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccCh
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTP 317 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~ 317 (829)
|+.+|+||+.||.+|++.|++|++|++||||+|.|+..
T Consensus 84 V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 84 VNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRV 121 (264)
T ss_dssp EE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTS
T ss_pred ehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccc
Confidence 99999999999999999999999999999999998654
No 226
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=98.73 E-value=1.4e-08 Score=105.00 Aligned_cols=147 Identities=12% Similarity=-0.019 Sum_probs=103.6
Q ss_pred CCcccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccccc
Q psy11396 583 DLKNSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAI 662 (829)
Q Consensus 583 n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~ 662 (829)
...+..++.+|...++.+.+|+++++|||+..+..| ++.+..++...- ..+...+||+||.++| |.
T Consensus 24 ~~~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el~~~i------------~~~~~~~kpVia~~~~-~~ 89 (222)
T cd07018 24 GESSELSLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEELRQAL------------ERFRASGKPVIAYADG-YS 89 (222)
T ss_pred CCcCCccHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHHHHHH------------HHHHHhCCeEEEEeCC-CC
Confidence 334566788999999999999999999999988777 667776653211 1112258999999998 88
Q ss_pred chhhhhhhccccccccccceecccccc------------ccccCCCc--------ceecc--------------------
Q psy11396 663 GAGWAMGLFCDYTIFSEESVYQSPYMR------------YGFTPGAG--------STLIF-------------------- 702 (829)
Q Consensus 663 GgG~~lal~cD~~ia~~~a~f~~~e~~------------~Gl~p~~g--------~~~~l-------------------- 702 (829)
++|+.++++||.+++.+.+.|+...+. +|+-+... +..+.
T Consensus 90 sggy~lasaad~I~a~p~~~vg~iGv~~~~~~~~~ll~klGv~~~~~~~G~~K~~~~~~~~~~~s~~~r~~~~~~l~~~~ 169 (222)
T cd07018 90 QGQYYLASAADEIYLNPSGSVELTGLSAETLFFKGLLDKLGVEVQVFRVGEYKSAVEPFTRDDMSPEAREQTQALLDSLW 169 (222)
T ss_pred chhhhhhhhCCEEEECCCceEEeeccchhhhhHHHHHHHcCCcEEEEEEeccccccchhhcccCCHHHHHHHHHHHHHHH
Confidence 999999999999999999998885432 23322110 00111
Q ss_pred ---------ccccCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHH
Q psy11396 703 ---------PQRFGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFY 744 (829)
Q Consensus 703 ---------~r~iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~ 744 (829)
.|.+...... -+..|+.|++++|++.||||++...+++.+.
T Consensus 170 ~~f~~~Va~~R~~~~~~~~-~~~~~~~~~~~~A~~~GLvD~i~~~~e~~~~ 219 (222)
T cd07018 170 DQYLADVAASRGLSPDALE-ALIDLGGDSAEEALEAGLVDGLAYRDELEAR 219 (222)
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHcCCcHHHHHHHCCCCCcCCcHHHHHHH
Confidence 0111122222 2455899999999999999999977776554
No 227
>PLN02932 3-ketoacyl-CoA synthase
Probab=98.67 E-value=2.2e-07 Score=105.19 Aligned_cols=198 Identities=13% Similarity=0.137 Sum_probs=125.1
Q ss_pred CCCEEEEecccccCCC---CCHHHHHHHHHcCCC--ceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcC
Q psy11396 114 NDDIAIIGISGQFPKA---NNVKKFWNNLLIGRN--CVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLF 188 (829)
Q Consensus 114 ~~~IaItG~g~~~p~g---~~~~~~w~~l~~G~~--~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~ 188 (829)
+++|+.+-++|.-|.. .+.+.|-+....-+. .+.+-..+-. +|. ..+..+.|. .+-..+.+..
T Consensus 65 ~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~f~--------~~i~~rsGi-g~~t~~p~~~ 132 (478)
T PLN02932 65 PKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLM---DFC--------EKILERSGL-GQETYIPEGL 132 (478)
T ss_pred CCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHH---HHH--------HHHHHHcCC-CCceeecccc
Confidence 4789999999999984 477888776643321 1211100000 000 000000110 1101111222
Q ss_pred CCCCHH--HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhH
Q psy11396 189 FNISPS--EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPAR 266 (829)
Q Consensus 189 f~i~p~--~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 266 (829)
..+++. ......-...++..|+.+||+++|+++++|+ -+++.++.+. ....++.+
T Consensus 133 ~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId----~lIv~tst~~-------------------~~Pslaa~ 189 (478)
T PLN02932 133 QCLPLQQNLAVSRKETEEVIIGAVDNLFRNTGISPSDIG----ILVVNSSTFN-------------------PTPSLSSI 189 (478)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCC-------------------CCCcHHHH
Confidence 223333 3333344567999999999999999999997 7777765421 23456788
Q ss_pred hhhhccCC--Ccceeec-cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC
Q psy11396 267 VSYFLNLQ--GPCLAID-TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN 343 (829)
Q Consensus 267 ia~~lgl~--Gp~~tv~-~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~ 343 (829)
|...||++ -.++.++ .||++++.||..|.++|++|....|||+++|.++..... +..+ +..-.
T Consensus 190 V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~------------~d~r--~~l~t 255 (478)
T PLN02932 190 LVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNLYL------------GNNK--SMLVT 255 (478)
T ss_pred HHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecccccCC------------Ccch--hhhcc
Confidence 99999996 3788898 899999999999999999999999999999986432210 0000 00123
Q ss_pred CcccccceEEEEEccch
Q psy11396 344 GFVPGEGVGVLMLKKLK 360 (829)
Q Consensus 344 G~~~gEGaaalvL~~~~ 360 (829)
.+.+||||||+||++.+
T Consensus 256 ~~LFgDGAAAvlLs~~~ 272 (478)
T PLN02932 256 NCLFRIGGAAILLSNRS 272 (478)
T ss_pred ceeecccceEEEEeccc
Confidence 57789999999999754
No 228
>PLN02192 3-ketoacyl-CoA synthase
Probab=98.50 E-value=5.8e-07 Score=102.16 Aligned_cols=189 Identities=16% Similarity=0.191 Sum_probs=120.6
Q ss_pred CCCEEEEecccccCCC---CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCC
Q psy11396 114 NDDIAIIGISGQFPKA---NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFN 190 (829)
Q Consensus 114 ~~~IaItG~g~~~p~g---~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~ 190 (829)
+++|+.+-++|.-|.. .+.+.|-+....-. .+.. +.-.+-.......|. .+-..+.+..+.
T Consensus 99 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~----~~~~-----------~~~~f~~~~~~~sgl-g~~t~~p~~~~~ 162 (511)
T PLN02192 99 PRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTG----SFTE-----------ENLEFQRKILERSGL-GESTYLPEAVLN 162 (511)
T ss_pred CCcEEEEeeeeecCCccccccHHHHHHHHHHcC----CCCH-----------HHHHHHHHHHHhcCC-CCcccCChhhcc
Confidence 4689999999999984 56777776665331 1110 000000000111111 111223333333
Q ss_pred CCHHH--hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh
Q psy11396 191 ISPSE--AEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS 268 (829)
Q Consensus 191 i~p~~--~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 268 (829)
++|.. .....-...++..|+.+||+++|+++++|+ -+++.++ .++ ....++..|.
T Consensus 163 ~~~~~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DID----iLIv~~S-~~~------------------~~PSlaa~I~ 219 (511)
T PLN02192 163 VPPNPCMAEARKEAETVMFGAIDQLLAKTSVKPKDIG----ILIVNCS-LFN------------------PTPSLSAMVI 219 (511)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECC-CCC------------------CCchHHHHHH
Confidence 33332 122233557889999999999999999997 5555533 221 1234678899
Q ss_pred hhccCCC--cceeec-cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCC-
Q psy11396 269 YFLNLQG--PCLAID-TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANG- 344 (829)
Q Consensus 269 ~~lgl~G--p~~tv~-~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G- 344 (829)
..+|++. +++.++ .||++++.||..|.++|+++....+||+++|.++..+ + +..++.-
T Consensus 220 n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S~n~-y-----------------~g~drs~l 281 (511)
T PLN02192 220 NHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENITLNW-Y-----------------FGNDRSML 281 (511)
T ss_pred HHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEeccccC-C-----------------CCCCHHHH
Confidence 9999974 788999 6999999999999999999999999999999865111 0 0111211
Q ss_pred ---cccccceEEEEEccc
Q psy11396 345 ---FVPGEGVGVLMLKKL 359 (829)
Q Consensus 345 ---~~~gEGaaalvL~~~ 359 (829)
+.+||||||+||++.
T Consensus 282 v~n~LFgDGAaAvLLs~~ 299 (511)
T PLN02192 282 VSNCLFRMGGAAILLSNK 299 (511)
T ss_pred hccccccccceEEEEecc
Confidence 467999999999874
No 229
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=98.49 E-value=1.3e-07 Score=93.79 Aligned_cols=133 Identities=15% Similarity=0.151 Sum_probs=88.5
Q ss_pred cccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhhh
Q psy11396 589 VVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAM 668 (829)
Q Consensus 589 ~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~l 668 (829)
....|...++.+++++ +..||+. .=|.|+++....... ..+..+++|+|+.|+|.|.++|+.+
T Consensus 14 ~~~~l~~~l~~a~~~~-~~~ivl~----inspGG~v~~~~~I~------------~~l~~~~~pvva~V~g~AaSaG~~i 76 (178)
T cd07021 14 LAAFVERALKEAKEEG-ADAVVLD----IDTPGGRVDSALEIV------------DLILNSPIPTIAYVNDRAASAGALI 76 (178)
T ss_pred HHHHHHHHHHHHHhCC-CCeEEEE----EECcCCCHHHHHHHH------------HHHHhCCCCEEEEECCchHHHHHHH
Confidence 3445666777777765 5666664 224455554443222 2334478999999999999999999
Q ss_pred hhccccccccccceeccccccccccCCCcce--------ec------ccccc--CHHHHHHHHhcC-------------C
Q psy11396 669 GLFCDYTIFSEESVYQSPYMRYGFTPGAGST--------LI------FPQRF--GKILSREILFTA-------------S 719 (829)
Q Consensus 669 al~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~--------~~------l~r~i--G~~~a~e~ll~g-------------~ 719 (829)
+++||++++++++.|+.++.-. ..+.. .. ++++- ....+..|+-.. -
T Consensus 77 a~a~d~i~m~p~a~iG~~~~v~----~~~~~~~~~K~~~~~~~~~~~~A~~~gr~~~~a~~mv~~~~~v~~~~~~~~~~l 152 (178)
T cd07021 77 ALAADEIYMAPGATIGAAEPIP----GDGNGAADEKVQSYWRAKMRAAAEKKGRDPDIAEAMVDKDIEVPGVGIKGGELL 152 (178)
T ss_pred HHhCCeEEECCCCeEecCeeEc----CCCccchhHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhhhccccccccccccee
Confidence 9999999999999999985542 22220 01 11111 244555555544 2
Q ss_pred ccCHHHHHHcCCcccccC-hhhHH
Q psy11396 720 EFKGKELKERGISMPVLP-RKQVL 742 (829)
Q Consensus 720 ~~~a~eA~~~GLv~~v~~-~~~l~ 742 (829)
.+|++||+++|++|.+.+ .++|.
T Consensus 153 ~lta~eA~~~g~~d~ia~~~~~ll 176 (178)
T cd07021 153 TLTADEALKVGYAEGIAGSLDELL 176 (178)
T ss_pred eeCHHHHHHhCCeEEEECCHHHHh
Confidence 699999999999999986 34443
No 230
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=98.44 E-value=7.9e-07 Score=90.38 Aligned_cols=117 Identities=14% Similarity=0.125 Sum_probs=101.8
Q ss_pred CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccc------cCccccchhhhccccccchh
Q psy11396 191 ISPSEAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLI------TDPKMYNAYALMGESVSILP 264 (829)
Q Consensus 191 i~p~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~a 264 (829)
|+|.+.|+|++..||+++++.+++++. .+++ .+|+++..|+..... ...+.++|..|.++++|+++
T Consensus 23 lp~m~rRRls~~~rla~~~a~~~~~~~----~~~d----~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~a 94 (218)
T PF13723_consen 23 LPPMQRRRLSRLSRLALEAALECLAED----EQPD----AIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAA 94 (218)
T ss_pred CCHHHHcccCHHHHHHHHHHHHHHhcc----CCCC----cEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHH
Confidence 899999999999999999999999653 2333 788888888764322 23456899999999999999
Q ss_pred hHhhhhccCCCcceeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccC
Q psy11396 265 ARVSYFLNLQGPCLAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINT 316 (829)
Q Consensus 265 ~~ia~~lgl~Gp~~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~ 316 (829)
+++++..+.++|+.++..+-.|...||..|+..+..| ++.||++.+|....
T Consensus 95 G~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p 145 (218)
T PF13723_consen 95 GYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLP 145 (218)
T ss_pred HHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCC
Confidence 9999999999999999999999999999999999999 99999999998653
No 231
>PRK06060 acyl-CoA synthetase; Validated
Probab=98.39 E-value=1.9e-07 Score=113.89 Aligned_cols=77 Identities=6% Similarity=0.001 Sum_probs=72.1
Q ss_pred chhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396 24 NDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS 102 (829)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~ 102 (829)
.+++...+.+.|+.+++.||||++++.|++++.|. |+|| |||+++|||+||++.+|++||.+..|++||+.+++.+.
T Consensus 539 ~~~~~~~~~~~v~~~~a~vl~~~~~~~i~~~~~f~-~lG~-dSl~av~l~~~l~~~~g~~l~~~~~~~~pt~~~la~~l 615 (705)
T PRK06060 539 RQERQRLVVDAVCAEAAKMLGEPDPWSVDQDLAFS-ELGF-DSQMTVTLCKRLAAVTGLRLPETVGWDYGSISGLAQYL 615 (705)
T ss_pred cHHHHHHHHHHHHHHHHHHhCCCChhhCCCCCChh-hcCc-hHHHHHHHHHHHHHHhCCCCCceeeecCCCHHHHHHHH
Confidence 36778888899999999999999999999999999 9999 99999999999999999999999999999998887764
No 232
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=98.15 E-value=1.5e-05 Score=83.64 Aligned_cols=195 Identities=15% Similarity=0.165 Sum_probs=123.5
Q ss_pred CCCEEEEecccccCCC---CCHHHHHHHHHcCCCceeeCCCCCCcccccCCccccccCcceeecccccCcccccCCcCCC
Q psy11396 114 NDDIAIIGISGQFPKA---NNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKNAIGKTICKKMGSLEDIEIFDPLFFN 190 (829)
Q Consensus 114 ~~~IaItG~g~~~p~g---~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~f~ 190 (829)
+++|+.+-+.|.-|.. .+.+.|++....-.. +.+-. -+| . -+ +....|.- +-..+.+..+.
T Consensus 6 ~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~-f~~~s-l~F-----~-------~k-IlerSGlG-~eTy~P~~~~~ 69 (290)
T PF08392_consen 6 PRPVYLVDFACYKPPDELRVSREEFIEHARRCGR-FDEES-LDF-----Q-------RK-ILERSGLG-DETYLPPALHE 69 (290)
T ss_pred CCCEEEEeeeecCCCcccccCHHHHHHHHHhccc-CChhH-HHH-----H-------HH-HHHhcCCC-ccccCCccccc
Confidence 4689999999999984 588999987765321 11100 000 0 00 11111111 11112222233
Q ss_pred CCHH--HhhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhh
Q psy11396 191 ISPS--EAEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVS 268 (829)
Q Consensus 191 i~p~--~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 268 (829)
++|. ..+..+-...++..++.++|+.+|+.|.+|+ .+++.++.. ...+.++..|.
T Consensus 70 ~p~~~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dId----iLVvncs~f-------------------~ptPSLsamIv 126 (290)
T PF08392_consen 70 IPPDPSLAAAREEAEMVIFGAVDDLLAKTGVKPSDID----ILVVNCSLF-------------------NPTPSLSAMIV 126 (290)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECcCC-------------------CcCCcHHHHHH
Confidence 3333 1122233445788899999999999999998 666665431 11235678899
Q ss_pred hhccCCCccee---eccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCc
Q psy11396 269 YFLNLQGPCLA---IDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGF 345 (829)
Q Consensus 269 ~~lgl~Gp~~t---v~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~ 345 (829)
..||++.-..+ ...||++|+.+|..|.++++.-.-..|||+.+|.++..+ +.+-++..++ ..+
T Consensus 127 nr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s~~~-Y~G~~rsmlv-------------~Nc 192 (290)
T PF08392_consen 127 NRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENISANW-YRGNDRSMLV-------------SNC 192 (290)
T ss_pred HHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeeccccc-ccCCcHHHhh-------------ccc
Confidence 99999864444 467899999999999999999999999999999875432 1111111111 236
Q ss_pred ccccceEEEEEccchh
Q psy11396 346 VPGEGVGVLMLKKLKD 361 (829)
Q Consensus 346 ~~gEGaaalvL~~~~~ 361 (829)
.+.+|++|++|.+...
T Consensus 193 LFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 193 LFRMGGAAVLLSNKPS 208 (290)
T ss_pred cccCCceeEEeecCcc
Confidence 6889999999997655
No 233
>PLN00415 3-ketoacyl-CoA synthase
Probab=98.12 E-value=1.9e-05 Score=88.49 Aligned_cols=120 Identities=13% Similarity=0.140 Sum_probs=85.0
Q ss_pred HHHHHHH-HHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC--cce
Q psy11396 202 QQRLFLQ-NCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG--PCL 278 (829)
Q Consensus 202 ~~~l~l~-aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G--p~~ 278 (829)
...|++. |+.+||+++|+++++|+ -+++.+ .+.+ .....+.++...+|++. ..+
T Consensus 133 e~em~i~~A~~~aL~~aGi~p~dID----~LIvs~-T~~~------------------~~Pslaa~l~~~LGLr~~v~~~ 189 (466)
T PLN00415 133 ESELVIFGALNSLFKKTGIEPREVG----IFIVNC-SLFN------------------PNPSLSSMIVNRYKLKTDVKTY 189 (466)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEC-cCCC------------------CCchHHHHHHHHhCCCCCceEE
Confidence 4445555 77788899999999987 444432 2211 12345678889999972 567
Q ss_pred eecc-chhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCC--CCcccccceEEEE
Q psy11396 279 AIDT-ACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRA--NGFVPGEGVGVLM 355 (829)
Q Consensus 279 tv~~-acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~--~G~~~gEGaaalv 355 (829)
.|+. ||++++.+|..|.++++++....+||.++|.++.... . +-|... ..+.+||||+|+|
T Consensus 190 dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~----------~------~~dr~~lv~n~LFgDGAAAvl 253 (466)
T PLN00415 190 NLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMY----------R------GNDRSMLVPNCLFRVGGAAVM 253 (466)
T ss_pred EeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEeccccccc----------C------CCcHhHhccceeecccceEEE
Confidence 7887 9999999999999999999999999999998542210 0 001000 1256899999999
Q ss_pred Eccch
Q psy11396 356 LKKLK 360 (829)
Q Consensus 356 L~~~~ 360 (829)
|++..
T Consensus 254 Ls~~~ 258 (466)
T PLN00415 254 LSNRS 258 (466)
T ss_pred EecCc
Confidence 99743
No 234
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.05 E-value=2.6e-05 Score=80.65 Aligned_cols=186 Identities=18% Similarity=0.208 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcc-
Q psy11396 199 MDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPC- 277 (829)
Q Consensus 199 ~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~- 277 (829)
+.....+.+++.++||+.+++.+++++ .|++.++.+ .....+-.+|...|||.-..
T Consensus 73 ie~a~~l~v~a~r~aL~~~~l~pedId----~vv~vtsTG-------------------~~~Ps~dari~~~Lgl~p~~~ 129 (356)
T COG3424 73 IEEAVPLGVDALRRALDGSPLRPEDID----AVVTVTSTG-------------------LATPSLDARIVGELGLSPDTR 129 (356)
T ss_pred HHHHHHHHHHHHHHHhccCCCCHHHCc----EEEEEeecc-------------------ccCCChhHHHHhhcCCCCccc
Confidence 344567899999999999999999998 555554432 11222345788888885322
Q ss_pred --eeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC----C-cccccc
Q psy11396 278 --LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN----G-FVPGEG 350 (829)
Q Consensus 278 --~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~----G-~~~gEG 350 (829)
-.-.-||+.|..++..|.+..+......+||+.+|.++-.. ++..+.+ | ..+|||
T Consensus 130 Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELCSLt~------------------~~~d~t~s~lVgtaLF~DG 191 (356)
T COG3424 130 RVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCSLTY------------------VFADDTKSNLVGTALFGDG 191 (356)
T ss_pred eeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeeeeeee------------------ecCCCCcccceeeeeecCC
Confidence 12467999999999999999999999999999999875221 1111222 1 457999
Q ss_pred eEEEEEccchhhhhCCCceEE-E--------------EEEeeeecCCCCCC--CCCCC--HHHHHHHHHHHHHHcCCCCC
Q psy11396 351 VGVLMLKKLKDAKKDGDDIYC-I--------------IKGWGVNQDGKTNG--ITAPN--TKSQIRLQTKIYKKFNINPN 411 (829)
Q Consensus 351 aaalvL~~~~~A~~~g~~i~a-~--------------I~g~~~~~dg~~~~--~~~p~--~~~~~~ai~~Al~~Agl~~~ 411 (829)
++|+|+.-...+. +..+.. . +-||.++..|.... ...|+ ...+...+...|...+++.+
T Consensus 192 ~AA~vv~gd~~~~--~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~ 269 (356)
T COG3424 192 AAAVVVSGDRRAE--GKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIE 269 (356)
T ss_pred eeEEEEecccccc--ccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchh
Confidence 9999998633322 111111 1 33455555553321 11222 34567788899999999999
Q ss_pred CccEEEecCCCCCCCC
Q psy11396 412 DIQLLEAHGTGTKLGD 427 (829)
Q Consensus 412 dId~ve~hgtgt~~gD 427 (829)
||+.+-.|=-|-+.-|
T Consensus 270 dI~~w~~HPGG~KVid 285 (356)
T COG3424 270 DIEAWVVHPGGPKVID 285 (356)
T ss_pred hhceeeeCCCCchHHH
Confidence 9999999955554433
No 235
>PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups []. The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A ....
Probab=97.98 E-value=3.4e-06 Score=69.44 Aligned_cols=64 Identities=6% Similarity=0.114 Sum_probs=57.3
Q ss_pred hhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396 34 NNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN 100 (829)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~ 100 (829)
-+++.++.+|| .+++.++++..|. ++|+ ||+.+++|.++|++.+|+.++....|++||...++.
T Consensus 2 ~l~~~~~~~l~-~~~~~i~~~~~~~-~lG~-DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~~ 65 (67)
T PF00550_consen 2 QLREIIAEVLG-VDPEEIDPDTDFF-DLGL-DSLDAIELVSELEEEFGIKIPPSDLFEHPTIRDLAE 65 (67)
T ss_dssp HHHHHHHHHHT-SSGGCTSTTSBTT-TTTS-SHHHHHHHHHHHHHHHTSSTTHHHHCTSSSHHHHHH
T ss_pred HHHHHHHHHHC-cCHhhCCCCCCHH-HhCC-chHHHHHHHHHHHHHHcCCCCHHHHHcCCCHHHHHh
Confidence 36778888998 5678999999999 9999 999999999999999999999999999999876653
No 236
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas
Probab=97.92 E-value=1.3e-05 Score=78.48 Aligned_cols=133 Identities=12% Similarity=0.097 Sum_probs=80.5
Q ss_pred ccccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchh
Q psy11396 586 NSTVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAG 665 (829)
Q Consensus 586 ~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG 665 (829)
++.+..++...|..++.++..+.|+|. .=|.|+++..-....+ .+..+++|+++.+.|.|.++|
T Consensus 10 ~~~~~~~~~~~L~~l~~~~~~~~i~l~----InSpGG~v~~~~~i~~------------~i~~~~~~v~~~~~g~aaS~~ 73 (162)
T cd07013 10 EDISANQFAAQLLFLGAVNPEKDIYLY----INSPGGDVFAGMAIYD------------TIKFIKADVVTIIDGLAASMG 73 (162)
T ss_pred CcHHHHHHHHHHHHHhcCCCCCCEEEE----EECCCCcHHHHHHHHH------------HHHhcCCCceEEEEeehhhHH
Confidence 445566667777777776655555553 2244555533322221 222367789999999999999
Q ss_pred hhhhhccc--cccccccceeccccccccccCCCcc----------------eeccccc--cCHHHHHHHHhcCCccCHHH
Q psy11396 666 WAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGS----------------TLIFPQR--FGKILSREILFTASEFKGKE 725 (829)
Q Consensus 666 ~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~----------------~~~l~r~--iG~~~a~e~ll~g~~~~a~e 725 (829)
..++++|| .|++.++++|++....-+. -+... ...+.+. .......+++-.+..++++|
T Consensus 74 ~~i~~a~~~g~r~~~p~a~~~ih~~~~~~-~g~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~e 152 (162)
T cd07013 74 SVIAMAGAKGKRFILPNAMMMIHQPWGGT-LGDATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLERDTWLSARE 152 (162)
T ss_pred HHHHHcCCCCcEEEecCEEEEEccCcccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCCccccHHH
Confidence 99999999 5677667766653322111 00000 0011111 12445556666667779999
Q ss_pred HHHcCCcccc
Q psy11396 726 LKERGISMPV 735 (829)
Q Consensus 726 A~~~GLv~~v 735 (829)
|+++||||++
T Consensus 153 A~~~GliD~i 162 (162)
T cd07013 153 AVEYGFADTI 162 (162)
T ss_pred HHHcCCCCcC
Confidence 9999999985
No 237
>KOG1683|consensus
Probab=97.85 E-value=6.1e-07 Score=95.27 Aligned_cols=227 Identities=10% Similarity=0.005 Sum_probs=143.9
Q ss_pred ccCCcccccccccccchhhhcccccceeeeeeCCC-CeeeccCChhhhhhhhcccccccc---cccccccccCCCCEEEE
Q psy11396 581 SKDLKNSTVVKGITDAFSYINSSVQYKVIIITGYE-NYFACGGTKEGLLKIQKGISRFTD---EKSYCMPLYCKIPVIAA 656 (829)
Q Consensus 581 ~~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~kp~Iaa 656 (829)
.-|-.|.++.++|..-++.+..+..+++...|+.. +.|++|.|..++.........-.. ...+.....++.|+.++
T Consensus 75 eav~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg~h~fspa~~m~LlEii~~~~tS~~~iA~A 154 (380)
T KOG1683|consen 75 EAVFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVGMHFFSPAHWMQLLEIILALYTSKLTIATA 154 (380)
T ss_pred cchhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhccccccCHHHHHHHHHHHHhcCCCchHHHHH
Confidence 33444566677777778888888888999998885 899999999887644332221111 12234444599999999
Q ss_pred ecccccchh--hhhhhcccccccccc--ceeccccccccc-cCCCcceeccccccCHHHHHHHHhcCCccCHHHHHHcCC
Q psy11396 657 MQGHAIGAG--WAMGLFCDYTIFSEE--SVYQSPYMRYGF-TPGAGSTLIFPQRFGKILSREILFTASEFKGKELKERGI 731 (829)
Q Consensus 657 v~G~a~GgG--~~lal~cD~~ia~~~--a~f~~~e~~~Gl-~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~~~GL 731 (829)
+||++-.++ +.++-+|+|++...- -..+..+..+++ .|++- .-.+...+|.+.+-..+--+.-|+..||++-|+
T Consensus 155 in~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~-iD~~~t~fGf~~g~~~L~d~~gfdv~eal~~gl 233 (380)
T KOG1683|consen 155 INGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWL-IDSLITKFGFRVGERALADGVGFDVAEALAVGL 233 (380)
T ss_pred HhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHH-HHHHHHhcCccccHHHHhhccCccHHHHHhhcc
Confidence 999999999 778999999998743 344678888773 33332 223444556666666677788999999999999
Q ss_pred cccccCh--hhHHHHHHHHHHHHhcCCHHHHHHHHHHHH--------hhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHH
Q psy11396 732 SMPVLPR--KQVLFYSLKLAKKLSLLSKKELELQKKYYS--------HSLQKKLSTIFLHELTMHDYTFVNNPSVITNIE 801 (829)
Q Consensus 732 v~~v~~~--~~l~~~~~~~a~~i~~~~~~a~~~~K~~l~--------~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~ 801 (829)
++++.|+ +++.+....-........+.+-..+|+..+ +-. ...... ....+-+.... ..|-++|+++
T Consensus 234 ~~~~~~r~~eel~~~~~~g~kT~kg~y~y~~~l~k~~~~~~~~~~~r~l~-~~~~~r-~~~~ed~v~~~-~~p~VnEal~ 310 (380)
T KOG1683|consen 234 GDEIGPRIEEELLEKGRAGIKTGKGIYPYARGLTKKMKRDEMEALLRRLS-LTPNPR-VADDEDFVEFL-LSPFVNEALR 310 (380)
T ss_pred chhccchhHHHHHHHHhhhhhccCcccccccccccCCChhhHHHHHHHhc-cCCCcc-cCCHHHHHHHH-hhHHHHHHHH
Confidence 9999984 555555444444433333333222222222 111 000000 01112223333 5789999999
Q ss_pred HHHhhccccC
Q psy11396 802 RYFDKSIKKN 811 (829)
Q Consensus 802 ~~~~k~~~~~ 811 (829)
-|.|.-++++
T Consensus 311 ~l~EGi~~~~ 320 (380)
T KOG1683|consen 311 CLLEGLKASP 320 (380)
T ss_pred HHHHHHhcCc
Confidence 9999875444
No 238
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=97.85 E-value=1.1e-05 Score=69.19 Aligned_cols=64 Identities=25% Similarity=0.349 Sum_probs=48.2
Q ss_pred eeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEc
Q psy11396 278 LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLK 357 (829)
Q Consensus 278 ~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~ 357 (829)
|-|+.+|++++.||..|..+|++|.++.+|+++.|........ ......+++||||+|+||+
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~~------------------~~~~~~~~~gDgAaA~vl~ 62 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVDR------------------TDRQTAFIFGDGAAAVVLS 62 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSHT------------------THHHHHTTB-EEEEEEEEE
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccccccc------------------cccCcceeecchheEEEEE
Confidence 4578999999999999999999999999999999986431110 0112335789999999999
Q ss_pred cc
Q psy11396 358 KL 359 (829)
Q Consensus 358 ~~ 359 (829)
+.
T Consensus 63 ~~ 64 (80)
T PF08545_consen 63 RD 64 (80)
T ss_dssp EE
T ss_pred ec
Confidence 86
No 239
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=97.83 E-value=2.4e-05 Score=76.76 Aligned_cols=135 Identities=17% Similarity=0.186 Sum_probs=90.0
Q ss_pred cccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEec---ccccchhhh
Q psy11396 591 KGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQ---GHAIGAGWA 667 (829)
Q Consensus 591 ~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~---G~a~GgG~~ 667 (829)
.-|...++.++++ ..+.|+|. .=|.|+.+.......+ .+...++||++.|. |.|..+|..
T Consensus 16 ~~l~~~l~~A~~~-~~~~i~l~----inSPGG~v~~~~~I~~------------~i~~~~~pvv~~v~p~g~~AaSag~~ 78 (172)
T cd07015 16 DQFDRYITIAEQD-NAEAIIIE----LDTPGGRADAAGNIVQ------------RIQQSKIPVIIYVYPPGASAASAGTY 78 (172)
T ss_pred HHHHHHHHHHhcC-CCCeEEEE----EECCCCCHHHHHHHHH------------HHHhcCcCEEEEEecCCCeehhHHHH
Confidence 3445566666654 45666664 2345566654432221 22336899999999 999999999
Q ss_pred hhhccccccccccceeccccccccccCCCcc--------eec------cccccC--HHHHHHHHhcCCccCHHHHHHcCC
Q psy11396 668 MGLFCDYTIFSEESVYQSPYMRYGFTPGAGS--------TLI------FPQRFG--KILSREILFTASEFKGKELKERGI 731 (829)
Q Consensus 668 lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~--------~~~------l~r~iG--~~~a~e~ll~g~~~~a~eA~~~GL 731 (829)
++++||.+++.+++.++......+..+.... ... +++.-| ...+.+++.....++++||+++|+
T Consensus 79 I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v~~~~~lta~EA~~~G~ 158 (172)
T cd07015 79 IALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPEEALKYGV 158 (172)
T ss_pred HHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHhhcCcCHHHHHHcCC
Confidence 9999999999999999988875432120000 001 111112 456777777788899999999999
Q ss_pred cccccCh-hhHH
Q psy11396 732 SMPVLPR-KQVL 742 (829)
Q Consensus 732 v~~v~~~-~~l~ 742 (829)
+|.|+.. ++|.
T Consensus 159 iD~ia~~~~~ll 170 (172)
T cd07015 159 IEVVARDINELL 170 (172)
T ss_pred ceeeeCCHHHHh
Confidence 9999964 4443
No 240
>PRK10949 protease 4; Provisional
Probab=97.70 E-value=6.3e-05 Score=88.45 Aligned_cols=142 Identities=14% Similarity=0.144 Sum_probs=90.3
Q ss_pred ccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhhhhhc
Q psy11396 592 GITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGLF 671 (829)
Q Consensus 592 eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal~ 671 (829)
.+...++.+.+|+++++||+.=. |.|+............ .......||+||.+.+.|.-||..++++
T Consensus 351 ~~~~~l~~a~~D~~vkaVvLrIn----SpGGs~~ase~i~~~i---------~~~r~~gKPVvas~~~~aASggY~iA~a 417 (618)
T PRK10949 351 TTAAQIRDARLDPKVKAIVLRVN----SPGGSVTASEVIRAEL---------AAARAAGKPVVVSMGGMAASGGYWISTP 417 (618)
T ss_pred HHHHHHHHHHhCCCCcEEEEEec----CCCCcHHHHHHHHHHH---------HHHHhcCCcEEEEECCCCccHHHHHHHh
Confidence 45667888999999999999743 3344432222221111 1112357999999999999999999999
Q ss_pred cccccccccceeccccc------------cccccCCCcceecc----------------------------------ccc
Q psy11396 672 CDYTIFSEESVYQSPYM------------RYGFTPGAGSTLIF----------------------------------PQR 705 (829)
Q Consensus 672 cD~~ia~~~a~f~~~e~------------~~Gl~p~~g~~~~l----------------------------------~r~ 705 (829)
||.+++.+.+..+...+ ++|+.+....+-.+ .|.
T Consensus 418 ad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~~~~~~~~~s~e~~~~~q~~ld~~y~~F~~~Va~~R~ 497 (618)
T PRK10949 418 ANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLADVSITKALPPEFQQMMQLSIENGYKRFITLVADSRH 497 (618)
T ss_pred cCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999766444222 23443322111111 011
Q ss_pred cCHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHH
Q psy11396 706 FGKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLK 747 (829)
Q Consensus 706 iG~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~ 747 (829)
+..... +-+..|+.|++++|++.||||++-.-++..+.+.+
T Consensus 498 ~~~~~v-~~ia~Grv~tg~~A~~~GLVD~lG~~~~ai~~a~~ 538 (618)
T PRK10949 498 KTPEQI-DKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAE 538 (618)
T ss_pred CCHHHH-HHHhcCCcccHHHHHHcCCCccCCCHHHHHHHHHH
Confidence 222222 23578999999999999999999765554444433
No 241
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=97.69 E-value=7.3e-05 Score=75.78 Aligned_cols=134 Identities=17% Similarity=0.121 Sum_probs=79.6
Q ss_pred cCCcccccccccccchhhhcccccce--eeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecc
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYK--VIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQG 659 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr--~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G 659 (829)
..+++..+.+.+...+..++.+...+ .+.|. |.|+++..-....+ .+...+.|+++.+.|
T Consensus 37 ~g~I~~~~~~~i~~~L~~l~~~~~~~~I~l~In------SpGG~v~~g~~I~d------------~i~~~~~~v~t~~~G 98 (200)
T PRK00277 37 GGEVEDHMANLIVAQLLFLEAEDPDKDIYLYIN------SPGGSVTAGLAIYD------------TMQFIKPDVSTICIG 98 (200)
T ss_pred CCEECHHHHHHHHHHHHHhhccCCCCCEEEEEE------CCCCcHHHHHHHHH------------HHHhcCCCEEEEEEe
Confidence 34556666777777777666543222 23334 34455544332222 122256789999999
Q ss_pred cccchhhhhhhccccccccccceeccccccccccCCCcce----------------------eccccccC--HHHHHHHH
Q psy11396 660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGST----------------------LIFPQRFG--KILSREIL 715 (829)
Q Consensus 660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~----------------------~~l~r~iG--~~~a~e~l 715 (829)
.|.++|..++++++ ++.++++|+.++++.++.+++ ..+..+-| .....+++
T Consensus 99 ~aaS~a~~I~~ag~-----~~~r~~~p~s~imih~p~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tg~~~~~i~~~~ 173 (200)
T PRK00277 99 QAASMGAFLLAAGA-----KGKRFALPNSRIMIHQPLGGFQGQATDIEIHAREILKLKKRLNEILAEHTGQPLEKIEKDT 173 (200)
T ss_pred EeccHHHHHHhcCC-----CCCEEEcCCceEEeccCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence 99999998887732 333444444444444333221 11222223 45555666
Q ss_pred hcCCccCHHHHHHcCCcccccCh
Q psy11396 716 FTASEFKGKELKERGISMPVLPR 738 (829)
Q Consensus 716 l~g~~~~a~eA~~~GLv~~v~~~ 738 (829)
-....++|+||+++||||+|+..
T Consensus 174 ~~~~~lsa~EA~e~GliD~Ii~~ 196 (200)
T PRK00277 174 DRDNFMSAEEAKEYGLIDEVLTK 196 (200)
T ss_pred hCCccccHHHHHHcCCccEEeec
Confidence 66778999999999999999863
No 242
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=97.59 E-value=0.0016 Score=68.17 Aligned_cols=174 Identities=18% Similarity=0.200 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCcceeec
Q psy11396 202 QQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGPCLAID 281 (829)
Q Consensus 202 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~tv~ 281 (829)
+++|..+|+..||+.||+.+++++ -++-| |. .+ ..+.++..+..|++ |-+=+-
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId----~~~aG----DL---------------ln--Q~i~s~f~ar~l~i--Pf~Gly 103 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDID----YLFAG----DL---------------LN--QIISSSFAARDLGI--PFLGLY 103 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-S----EEEEE----ET---------------TC--CCCHHHHHHHHHT----EEEB-
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCe----EEEeh----hh---------------hh--hhHHHHHHHHhcCC--Cccchh
Confidence 568999999999999999998887 34443 11 11 12234445555555 888899
Q ss_pred cchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEccchh
Q psy11396 282 TACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLKKLKD 361 (829)
Q Consensus 282 ~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~~~~~ 361 (829)
.+||+...+|.+|+.+|..|-++.++++-.....+..... +.-...+.-||... ...--|+|++||.+...
T Consensus 104 gACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQf-----R~P~EyG~Qrp~tA----qwTVTGaGa~il~~~~~ 174 (329)
T PF07451_consen 104 GACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQF-----RFPTEYGGQRPPTA----QWTVTGAGAAILSKEGS 174 (329)
T ss_dssp -CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT--------GGGT----TT------EE--EEEEEEEESS--
T ss_pred hHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhc-----cCchhccCCCCCcc----cEEEeceEEEEEecCCC
Confidence 9999999999999999999999999999887654433221 11112233343221 12235788999986432
Q ss_pred hhhCCCceEEEEEEeeeecCCCCCCCCCCC------HHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396 362 AKKDGDDIYCIIKGWGVNQDGKTNGITAPN------TKSQIRLQTKIYKKFNINPNDIQLLEAHG 420 (829)
Q Consensus 362 A~~~g~~i~a~I~g~~~~~dg~~~~~~~p~------~~~~~~ai~~Al~~Agl~~~dId~ve~hg 420 (829)
.|+ |.+..+.-- -..+..+|+ .++....|.+-|++.|.+|+|-|.|..-+
T Consensus 175 ------~p~--It~~T~GkV-vD~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGD 230 (329)
T PF07451_consen 175 ------GPR--ITHATIGKV-VDMGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGD 230 (329)
T ss_dssp ------SEE--EEEEE-----B-SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS
T ss_pred ------CcE--EEEEEEEEE-EEcCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecc
Confidence 333 333221100 112344555 33456778888999999999999999753
No 243
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=97.57 E-value=0.00017 Score=73.74 Aligned_cols=124 Identities=15% Similarity=0.162 Sum_probs=84.0
Q ss_pred hhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC
Q psy11396 196 AEYMDPQQRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG 275 (829)
Q Consensus 196 ~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G 275 (829)
..+..-...|+.+|+.+||+++|+++.+|+ .+|+-++.+- ....+-.++...|||+.
T Consensus 94 ~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIt----hlv~vs~TG~-------------------~~PglD~~l~~~LgL~~ 150 (226)
T PF00195_consen 94 ALYAEEAPPLAEEAARKALAEAGLDPSDIT----HLVTVSCTGI-------------------AAPGLDARLINRLGLRP 150 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS-GGGEC----EEEEEESSSS-------------------ECS-HHHHHHHHHT--T
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcccc----eEEEEecCCc-------------------CCCchhHHHHhcCCCCC
Confidence 334445567999999999999999998887 6666554431 22334567889999974
Q ss_pred cc---eeeccchhhHHHHHHHHHHHHHcCCCCEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCC----Ccccc
Q psy11396 276 PC---LAIDTACSSSLVAIAHACDSLILGNSKIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRAN----GFVPG 348 (829)
Q Consensus 276 p~---~tv~~acsSgl~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~----G~~~g 348 (829)
.. .....||..|..+|..|....++..-..|||..+|.++-.... |.+.+.+ ...+|
T Consensus 151 ~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~----------------~~~~~~~~lv~~aLFg 214 (226)
T PF00195_consen 151 DVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCSLHFQA----------------PNDDSLDNLVANALFG 214 (226)
T ss_dssp TSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHH----------------CCTTSHHHHHHHHHB-
T ss_pred CcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeEEEEec----------------CCcccHHHHhHHhhhc
Confidence 32 3467899999999999999999999999999999987532210 1111111 14589
Q ss_pred cceEEEEEcc
Q psy11396 349 EGVGVLMLKK 358 (829)
Q Consensus 349 EGaaalvL~~ 358 (829)
|||+|+||..
T Consensus 215 DGaAA~vv~~ 224 (226)
T PF00195_consen 215 DGAAAVVVGA 224 (226)
T ss_dssp EEEEEEEEES
T ss_pred CCceEEEEcc
Confidence 9999999864
No 244
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=97.52 E-value=0.00025 Score=74.11 Aligned_cols=82 Identities=21% Similarity=0.288 Sum_probs=58.4
Q ss_pred ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH
Q psy11396 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL 726 (829)
Q Consensus 647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA 726 (829)
...+.|+|++|-|.|.|||......||++++.+++.++.- .|.++....+...--...+.+. ..+++.++
T Consensus 133 s~~~VP~IsVI~G~~~gGgA~a~~~~D~v~m~~~a~~~v~------~pe~~a~il~~~~~~a~~aa~~----~~~~a~~l 202 (256)
T PRK12319 133 SDLKVPIIAIIIGEGGSGGALALAVADQVWMLENTMYAVL------SPEGFASILWKDGSRATEAAEL----MKITAGEL 202 (256)
T ss_pred hCCCCCEEEEEeCCcCcHHHHHhhcCCEEEEecCceEEEc------CHHHHHHHHhcCcccHHHHHHH----cCCCHHHH
Confidence 3478999999999999998887789999999998876542 2333332222222122333333 37799999
Q ss_pred HHcCCcccccCh
Q psy11396 727 KERGISMPVLPR 738 (829)
Q Consensus 727 ~~~GLv~~v~~~ 738 (829)
++.|+||+|+|.
T Consensus 203 ~~~g~iD~ii~e 214 (256)
T PRK12319 203 LEMGVVDKVIPE 214 (256)
T ss_pred HHCCCCcEecCC
Confidence 999999999974
No 245
>PRK00982 acpP acyl carrier protein; Provisional
Probab=97.52 E-value=3.4e-05 Score=65.70 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=60.4
Q ss_pred HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396 30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL 101 (829)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~ 101 (829)
.+++.+++.++.++|.+ ++.++++..|..++|+ ||+..++|..+|++.+|+.+|+...++.+|...++.+
T Consensus 3 ~i~~~l~~~l~~~l~~~-~~~i~~d~~l~~dlgl-DSl~~~~li~~le~~f~i~i~~~~~~~~~ti~~l~~~ 72 (78)
T PRK00982 3 EIFEKVKKIIVEQLGVD-EEEVTPEASFVDDLGA-DSLDTVELVMALEEEFGIEIPDEDAEKIKTVGDAVDY 72 (78)
T ss_pred HHHHHHHHHHHHHHCCC-HHHCCCCcchHhhcCC-CHHHHHHHHHHHHHHHCCCcCHHHHHHcCcHHHHHHH
Confidence 36777888899999986 7789999999559999 9999999999999999999999987888877665543
No 246
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=97.38 E-value=0.00045 Score=73.83 Aligned_cols=80 Identities=23% Similarity=0.290 Sum_probs=59.0
Q ss_pred cCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396 648 YCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK 727 (829)
Q Consensus 648 ~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~ 727 (829)
....|+|++|-|.|.|||.-....||++++.++++++. +.|.++++..+... .++.++ ...-++|+++.+
T Consensus 190 ~~~VP~IsVViGeggsGGAlal~~aD~V~m~e~a~~sV------isPEg~a~Il~~d~---~~a~~a-A~~~~ita~dL~ 259 (322)
T CHL00198 190 SFEVPIICTIIGEGGSGGALGIGIGDSIMMLEYAVYTV------ATPEACAAILWKDS---KKSLDA-AEALKITSEDLK 259 (322)
T ss_pred cCCCCEEEEEeCcccHHHHHhhhcCCeEEEeCCeEEEe------cCHHHHHHHHhcch---hhHHHH-HHHcCCCHHHHH
Confidence 47899999999999888876555699999999987654 23444444433332 344433 334689999999
Q ss_pred HcCCcccccC
Q psy11396 728 ERGISMPVLP 737 (829)
Q Consensus 728 ~~GLv~~v~~ 737 (829)
++|+||+|+|
T Consensus 260 ~~giiD~ii~ 269 (322)
T CHL00198 260 VLGIIDEIIP 269 (322)
T ss_pred hCCCCeEecc
Confidence 9999999997
No 247
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=97.35 E-value=0.00054 Score=74.95 Aligned_cols=81 Identities=20% Similarity=0.281 Sum_probs=58.5
Q ss_pred ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH
Q psy11396 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL 726 (829)
Q Consensus 647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA 726 (829)
.....|+|++|-|.+.+||.....+||+++|.+++.++. +.|.++++..+....-...+.+ .-.+|++++
T Consensus 256 s~l~VPiISVViGeGgSGGAlalg~aD~VlMle~A~ysV------isPEgaAsILwkd~~~A~eAAe----alkitA~dL 325 (431)
T PLN03230 256 FGLRVPIIATVIGEGGSGGALAIGCGNRMLMMENAVYYV------ASPEACAAILWKSAAAAPKAAE----ALRITAAEL 325 (431)
T ss_pred hcCCCCEEEEEeCCCCcHHHHHhhcCCEEEEecCCEEEe------cCHHHHHHHHhccccchHHHHH----HcCCCHHHH
Confidence 347899999999999777766556789999999876544 2344444444443322333444 348999999
Q ss_pred HHcCCcccccC
Q psy11396 727 KERGISMPVLP 737 (829)
Q Consensus 727 ~~~GLv~~v~~ 737 (829)
++.|+||+|+|
T Consensus 326 ~~~GiID~II~ 336 (431)
T PLN03230 326 VKLGVVDEIVP 336 (431)
T ss_pred HhCCCCeEecc
Confidence 99999999997
No 248
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ
Probab=97.31 E-value=0.00012 Score=72.44 Aligned_cols=132 Identities=19% Similarity=0.071 Sum_probs=83.3
Q ss_pred ccccccccccchhhhccccccee--eeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccc
Q psy11396 586 NSTVVKGITDAFSYINSSVQYKV--IIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIG 663 (829)
Q Consensus 586 ~~~~~~eL~~~l~~~~~d~~vr~--vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~G 663 (829)
++....++...+..++.++..+. +.|. |.|+++..-....+. +..++.|+++.+.|.|.+
T Consensus 19 ~~~~~~~i~~~l~~~~~~~~~~~i~l~in------SpGG~v~~~~~i~~~------------l~~~~~~v~t~~~g~aaS 80 (171)
T cd07017 19 DDEVANLIIAQLLYLESEDPKKPIYLYIN------SPGGSVTAGLAIYDT------------MQYIKPPVSTICLGLAAS 80 (171)
T ss_pred cHHHHHHHHHHHHHHHccCCCCceEEEEE------CCCCCHHHHHHHHHH------------HHhcCCCEEEEEEeEehh
Confidence 44445555666666665443333 3334 334454333222221 122578999999999999
Q ss_pred hhhhhhhccc--cccccccceeccccccccccCCCcc---------------eecccccc--CHHHHHHHHhcCCccCHH
Q psy11396 664 AGWAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGS---------------TLIFPQRF--GKILSREILFTASEFKGK 724 (829)
Q Consensus 664 gG~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~---------------~~~l~r~i--G~~~a~e~ll~g~~~~a~ 724 (829)
+|..+++++| .|++.++++|++-+...+..-...- ...+..+- ......+++-.+..++++
T Consensus 81 ~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~~~lta~ 160 (171)
T cd07017 81 MGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTDRDRYMSAE 160 (171)
T ss_pred HHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhCCccccHH
Confidence 9999999999 7999999999988765443211000 01111222 234556667678889999
Q ss_pred HHHHcCCcccc
Q psy11396 725 ELKERGISMPV 735 (829)
Q Consensus 725 eA~~~GLv~~v 735 (829)
||+++||||+|
T Consensus 161 EA~e~GiiD~V 171 (171)
T cd07017 161 EAKEYGLIDKI 171 (171)
T ss_pred HHHHcCCCccC
Confidence 99999999986
No 249
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=97.29 E-value=0.00028 Score=71.93 Aligned_cols=135 Identities=13% Similarity=0.074 Sum_probs=87.3
Q ss_pred Ccccccccccccchhhhcccccce--eeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccc
Q psy11396 584 LKNSTVVKGITDAFSYINSSVQYK--VIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHA 661 (829)
Q Consensus 584 ~~~~~~~~eL~~~l~~~~~d~~vr--~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a 661 (829)
.+++.+..++...|..++.....+ .|.|. |.|+++..-....+ .+..++.|+++.+.|.|
T Consensus 43 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN------SpGG~v~~g~~I~d------------~i~~~~~~v~t~~~G~a 104 (207)
T PRK12553 43 QVDDASANDVMAQLLVLESIDPDRDITLYIN------SPGGSVTAGDAIYD------------TIQFIRPDVQTVCTGQA 104 (207)
T ss_pred eECHHHHHHHHHHHHHHHhCCCCCCEEEEEe------CCCCcHHHHHHHHH------------HHHhcCCCcEEEEEeeh
Confidence 445566666666776666543222 34444 34455544332222 12225668999999999
Q ss_pred cchhhhhhhccc--cccccccceeccccccc-cccCCCcce------------------eccccccC--HHHHHHHHhcC
Q psy11396 662 IGAGWAMGLFCD--YTIFSEESVYQSPYMRY-GFTPGAGST------------------LIFPQRFG--KILSREILFTA 718 (829)
Q Consensus 662 ~GgG~~lal~cD--~~ia~~~a~f~~~e~~~-Gl~p~~g~~------------------~~l~r~iG--~~~a~e~ll~g 718 (829)
.++|..++++|| .|++.++++|++-.... |.. .|-. ..+.+.-| .....+++-.+
T Consensus 105 aSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~~--~G~a~d~~~~~~~l~~~~~~~~~~ya~~tg~~~e~i~~~~~~~ 182 (207)
T PRK12553 105 ASAGAVLLAAGTPGKRFALPNARILIHQPSLGGGI--RGQASDLEIQAREILRMRERLERILAEHTGQSVEKIRKDTDRD 182 (207)
T ss_pred hhHHHHHHHcCCcCcEEECCCchhhhcCccccCCC--ccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcC
Confidence 999999999999 58999999998876543 211 1110 11222223 45666777778
Q ss_pred CccCHHHHHHcCCcccccCh
Q psy11396 719 SEFKGKELKERGISMPVLPR 738 (829)
Q Consensus 719 ~~~~a~eA~~~GLv~~v~~~ 738 (829)
..++|+||+++||||+|+..
T Consensus 183 ~~lta~EA~e~GliD~I~~~ 202 (207)
T PRK12553 183 KWLTAEEAKDYGLVDQIITS 202 (207)
T ss_pred ccccHHHHHHcCCccEEcCc
Confidence 89999999999999999863
No 250
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=97.24 E-value=0.00078 Score=78.21 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=74.0
Q ss_pred ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH
Q psy11396 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL 726 (829)
Q Consensus 647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA 726 (829)
.....|+|++|-|.|.|||......||+++|.++++++. +.|.++++..+...--...|. ..-.+||++.
T Consensus 277 asl~VP~ISVViGeggSGGAlA~g~aD~VlMle~A~~sV------isPEgaAsILwkd~~~A~eAA----e~lkiTa~dL 346 (762)
T PLN03229 277 FGLKVPIVSIVIGEGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAKAAPKAA----EKLRITAQEL 346 (762)
T ss_pred hCCCCCEEEEEeCCcchHHHHHhhcCCEEEEecCCeEEe------cCHHHHHHHHhcCcccHHHHH----HHcCCCHHHH
Confidence 347899999999999988887777799999998876543 334444444443332222333 3468999999
Q ss_pred HHcCCcccccChh-------------hHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy11396 727 KERGISMPVLPRK-------------QVLFYSLKLAKKLSLLSKKELELQKKY 766 (829)
Q Consensus 727 ~~~GLv~~v~~~~-------------~l~~~~~~~a~~i~~~~~~a~~~~K~~ 766 (829)
+++|+||+|+|.. .+...+.+....+...++..+...+..
T Consensus 347 ~~lGiiD~IIpEp~ggAh~d~~~~~~~l~~~i~~~L~~l~~~~~~~l~~~R~~ 399 (762)
T PLN03229 347 CRLQIADGIIPEPLGGAHADPSWTSQQIKIAINENMDELGKMDTEELLKHRML 399 (762)
T ss_pred HhCCCCeeeccCCCCccccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 9999999999721 223334445555666677665554443
No 251
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=97.17 E-value=0.0012 Score=70.77 Aligned_cols=81 Identities=20% Similarity=0.248 Sum_probs=56.3
Q ss_pred ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH
Q psy11396 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL 726 (829)
Q Consensus 647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA 726 (829)
.....|+|++|-|.|.|||......||++++.+++.++. +.|.++.+..+... .++.+..- -..+++.++
T Consensus 186 s~~~VP~IsVViGeggsGGAla~~~aD~v~m~~~a~~sV------isPEg~a~Il~kd~---~~a~~aae-~~~~ta~~l 255 (316)
T TIGR00513 186 ARLGVPVICTVIGEGGSGGALAIGVGDKVNMLEYSTYSV------ISPEGCAAILWKDA---SKAPKAAE-AMKITAPDL 255 (316)
T ss_pred HcCCCCEEEEEecccccHHHhhhccCCEEEEecCceEEe------cCHHHHHHHhccch---hhHHHHHH-HccCCHHHH
Confidence 347899999999999888876555799999998876654 22333333333222 22222222 267789999
Q ss_pred HHcCCcccccC
Q psy11396 727 KERGISMPVLP 737 (829)
Q Consensus 727 ~~~GLv~~v~~ 737 (829)
++.|+||+|+|
T Consensus 256 ~~~G~iD~II~ 266 (316)
T TIGR00513 256 KELGLIDSIIP 266 (316)
T ss_pred HHCCCCeEecc
Confidence 99999999997
No 252
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.10 E-value=0.00045 Score=75.23 Aligned_cols=134 Identities=18% Similarity=0.226 Sum_probs=87.7
Q ss_pred cccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhhhhh
Q psy11396 591 KGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAMGL 670 (829)
Q Consensus 591 ~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~lal 670 (829)
+.+...++.+..++++++|||. .=|.|+............+. +. -.||+++.|.++|.-||..+++
T Consensus 83 ~~~~~~l~~~~~~~~vk~vvL~----inSPGG~v~as~~i~~~l~~---------l~-~~~PV~v~v~~~AASGGY~IA~ 148 (317)
T COG0616 83 DDIEEILRAARADPSVKAVVLR----INSPGGSVVASELIARALKR---------LR-AKKPVVVSVGGYAASGGYYIAL 148 (317)
T ss_pred HHHHHHHHHHhcCCCCceEEEE----EECcCCchhHHHHHHHHHHH---------Hh-hcCCEEEEECCeecchhhhhhc
Confidence 3455677888889999999886 33455555433222222111 11 2349999999999999999999
Q ss_pred ccccccccccceeccccccccccCCCcceeccccccC-------------------------------------------
Q psy11396 671 FCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFG------------------------------------------- 707 (829)
Q Consensus 671 ~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG------------------------------------------- 707 (829)
+||.++|++.+..|--.+..+. |... .+...+|
T Consensus 149 aAd~I~a~p~si~GSIGVi~~~-~~~~---~l~~k~Gv~~~~~~ag~~k~~~~~~~~~t~e~~~~~q~~~~e~y~~F~~~ 224 (317)
T COG0616 149 AADKIVADPSSITGSIGVISGA-PNFE---ELLEKLGVEKEVITAGEYKDILSPFRPLTEEEREILQKEIDETYDEFVDK 224 (317)
T ss_pred cCCEEEecCCceeeeceeEEec-CCHH---HHHHhcCCceeeeeccccccccCcccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987765554432 1110 0001111
Q ss_pred -------HHHHHHHHhcCCccCHHHHHHcCCcccccChhhHH
Q psy11396 708 -------KILSREILFTASEFKGKELKERGISMPVLPRKQVL 742 (829)
Q Consensus 708 -------~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~ 742 (829)
......-+.+|+.|++++|++.||||++..-++..
T Consensus 225 V~~~R~~~~~~~~~~a~g~v~~g~~A~~~gLVDelg~~~~av 266 (317)
T COG0616 225 VAEGRGLSDEAVDKLATGRVWTGQQALELGLVDELGGLDDAV 266 (317)
T ss_pred HHhcCCCChhHHHHHhccceecHHHhhhcCCchhcCCHHHHH
Confidence 01112357889999999999999999998544333
No 253
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.05 E-value=0.00081 Score=67.87 Aligned_cols=93 Identities=14% Similarity=0.031 Sum_probs=63.3
Q ss_pred CCCCEEEEecccccchhhhhhhcccc--ccccccceeccccccccccCCCcc----------------eeccccccC--H
Q psy11396 649 CKIPVIAAMQGHAIGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGS----------------TLIFPQRFG--K 708 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~----------------~~~l~r~iG--~ 708 (829)
++.||++.+.|.|.+.|..++++||- |++.++++|.+-...-++. +... ...+...-| .
T Consensus 80 ~~~~V~t~v~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~-G~a~di~~~a~~l~~~~~~i~~~~a~~tg~~~ 158 (197)
T PRK14512 80 VKPKVFTIGVGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFK-GVATDIEIYANELNKVKSELNDIIAKETGQEL 158 (197)
T ss_pred CCCCEEEEEEeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccc-cCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence 57799999999999999999999985 8888888887655432221 1100 000111112 3
Q ss_pred HHHHHHHhcCCccCHHHHHHcCCcccccCh-hhHH
Q psy11396 709 ILSREILFTASEFKGKELKERGISMPVLPR-KQVL 742 (829)
Q Consensus 709 ~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~-~~l~ 742 (829)
....+++-....++++||+++||+|+|++. +++.
T Consensus 159 ~~i~~~~~~d~~lta~EA~~yGliD~I~~~~~~l~ 193 (197)
T PRK14512 159 DKVEKDTDRDFWLDSSSAVKYGLVFEVVETRLELE 193 (197)
T ss_pred HHHHHhhhcCcccCHHHHHHcCCccEeecCcHHhH
Confidence 345555555677999999999999999974 4443
No 254
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=96.97 E-value=0.0021 Score=68.92 Aligned_cols=82 Identities=22% Similarity=0.299 Sum_probs=57.5
Q ss_pred cccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHH
Q psy11396 646 PLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE 725 (829)
Q Consensus 646 ~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~e 725 (829)
+.....|+|++|-|.|.|||......||++++.+++.++. +.|.++....+.. ..++.+..- ...+|+.+
T Consensus 185 ~a~~~VP~IsVIiGeg~sGGAla~~~aD~v~m~~~A~~sv------isPEg~a~Il~~~---~~~a~~aae-~~~ita~~ 254 (319)
T PRK05724 185 MARLKVPIICTVIGEGGSGGALAIGVGDRVLMLEYSTYSV------ISPEGCASILWKD---ASKAPEAAE-AMKITAQD 254 (319)
T ss_pred HhCCCCCEEEEEeCCccHHHHHHHhccCeeeeecCceEee------cCHHHHHHHHhcC---chhHHHHHH-HcCCCHHH
Confidence 3447899999999999888876555699999888876543 2233333332322 133443333 56689999
Q ss_pred HHHcCCcccccC
Q psy11396 726 LKERGISMPVLP 737 (829)
Q Consensus 726 A~~~GLv~~v~~ 737 (829)
+++.|+||+|+|
T Consensus 255 l~~~g~iD~II~ 266 (319)
T PRK05724 255 LKELGIIDEIIP 266 (319)
T ss_pred HHHCCCceEecc
Confidence 999999999997
No 255
>smart00823 PKS_PP Phosphopantetheine attachment site. Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311.
Probab=96.84 E-value=0.00099 Score=56.71 Aligned_cols=77 Identities=4% Similarity=0.091 Sum_probs=65.3
Q ss_pred CCchhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccc
Q psy11396 22 INNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKN 100 (829)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~ 100 (829)
.++++....+...+.+.+..+++......++.+..|. ++|+ ||+.+++++.+|....++.++....|++|+...++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~-dSl~~~~~~~~l~~~~~~~i~~~~~~~~~t~~~l~~ 80 (86)
T smart00823 4 LPPAERRRLLLDLVREQVAAVLGHAAAEAIDPDRPFR-DLGL-DSLTAVELRNRLEAATGLRLPATLVFDHPTPAALAE 80 (86)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCCHH-HcCc-hHHHHHHHHHHHHHHHCCCCChHHHHcCCCHHHHHH
Confidence 3455566677788888899999887666579999999 9999 999999999999999999999999999998776543
No 256
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....
Probab=96.82 E-value=0.00033 Score=70.12 Aligned_cols=135 Identities=20% Similarity=0.173 Sum_probs=83.1
Q ss_pred Ccccccccccccchhhhc---ccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEeccc
Q psy11396 584 LKNSTVVKGITDAFSYIN---SSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGH 660 (829)
Q Consensus 584 ~~~~~~~~eL~~~l~~~~---~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~ 660 (829)
+++.++...+...|..++ ....+ .+.|. |.|+++..-....+ .+..++.|+++.+.|.
T Consensus 24 ~I~~~~~~~~~~~L~~l~~~~~~~~i-~i~IN------SpGG~v~~g~~i~~------------~i~~~~~~v~t~~~G~ 84 (182)
T PF00574_consen 24 PIDEESANRLISQLLYLENEDKNKPI-NIYIN------SPGGDVDAGLAIYD------------AIRSSKAPVTTVVLGL 84 (182)
T ss_dssp SBSHHHHHHHHHHHHHHHHHTSSSEE-EEEEE------ECEBCHHHHHHHHH------------HHHHSSSEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHHHhccCCCceE-EEEEc------CCCCccHHHHHHHH------------HHHhcCCCeEEEEeCc
Confidence 445555666666655553 22222 33345 45566654333222 2223688999999999
Q ss_pred ccchhhhhhhcccc--ccccccceeccccccccccCCCcc---------------eeccccc--cCHHHHHHHHhcCCcc
Q psy11396 661 AIGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGS---------------TLIFPQR--FGKILSREILFTASEF 721 (829)
Q Consensus 661 a~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~---------------~~~l~r~--iG~~~a~e~ll~g~~~ 721 (829)
|.+.|..++++|+. |++.+++.|++-+...+..-...- ...+... .......+++-....+
T Consensus 85 aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~~~l 164 (182)
T PF00574_consen 85 AASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAERTGLSKEEIEELMDRDTWL 164 (182)
T ss_dssp EETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHCSSTEEE
T ss_pred cccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHhCCccc
Confidence 99999999999999 799999999998886554321100 0111111 1234445555555678
Q ss_pred CHHHHHHcCCcccccC
Q psy11396 722 KGKELKERGISMPVLP 737 (829)
Q Consensus 722 ~a~eA~~~GLv~~v~~ 737 (829)
+++||+++||||+|+.
T Consensus 165 ~a~EA~~~GiiD~I~~ 180 (182)
T PF00574_consen 165 SAEEALEYGIIDEIIE 180 (182)
T ss_dssp EHHHHHHHTSSSEEES
T ss_pred cHHHHHHcCCCCEecc
Confidence 9999999999999974
No 257
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=96.79 E-value=0.0016 Score=65.78 Aligned_cols=140 Identities=16% Similarity=0.079 Sum_probs=85.4
Q ss_pred cCCcccccccccccchhhhcccccce--eeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecc
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYK--VIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQG 659 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr--~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G 659 (829)
..++++++..++...+-.++.+...+ .+.|.+.| +++..-....+ .+..++.|+...+-|
T Consensus 36 ~~~i~~~~a~~ii~~ll~L~~~~~~~~I~l~INSpG------G~v~~g~aIyd------------~m~~~~~~V~Tv~~G 97 (200)
T CHL00028 36 GQEVDDEIANQLIGLMVYLSIEDDTKDLYLFINSPG------GSVISGLAIYD------------TMQFVKPDVHTICLG 97 (200)
T ss_pred CCeecHHHHHHHHHHHHHHhccCCCCCEEEEEeCCC------cchhhHHHHHH------------HHHhcCCCEEEEEEE
Confidence 34556666666666666655332222 33345434 44433222221 122367788999999
Q ss_pred cccchhhhhhhccc--cccccccceeccccccccccCCCcc----------------eeccccccC--HHHHHHHHhcCC
Q psy11396 660 HAIGAGWAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGS----------------TLIFPQRFG--KILSREILFTAS 719 (829)
Q Consensus 660 ~a~GgG~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~----------------~~~l~r~iG--~~~a~e~ll~g~ 719 (829)
.|.+.|..+++++| -|++.++++|.+-....|..-+-.. ...+...-| .....+++-...
T Consensus 98 ~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~Tg~~~e~i~~~~~r~~ 177 (200)
T CHL00028 98 LAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEGQASEFVLEAEELLKLRETITRVYAQRTGKPLWVISEDMERDV 177 (200)
T ss_pred ehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhcCc
Confidence 99999999999998 5899999998887765442111100 011111212 334455566667
Q ss_pred ccCHHHHHHcCCcccccChh
Q psy11396 720 EFKGKELKERGISMPVLPRK 739 (829)
Q Consensus 720 ~~~a~eA~~~GLv~~v~~~~ 739 (829)
.++|+||+++||||+|+.+.
T Consensus 178 ~lta~EA~eyGliD~I~~~~ 197 (200)
T CHL00028 178 FMSATEAKAYGIVDLVAVNN 197 (200)
T ss_pred cCCHHHHHHcCCCcEEeecC
Confidence 79999999999999998643
No 258
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
Probab=96.73 E-value=0.0022 Score=64.51 Aligned_cols=89 Identities=18% Similarity=-0.030 Sum_probs=60.3
Q ss_pred CCCCEEEEecccccchhhhhhhccc--cccccccceeccccccccccCCCcce---------------eccccccC--HH
Q psy11396 649 CKIPVIAAMQGHAIGAGWAMGLFCD--YTIFSEESVYQSPYMRYGFTPGAGST---------------LIFPQRFG--KI 709 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~~lal~cD--~~ia~~~a~f~~~e~~~Gl~p~~g~~---------------~~l~r~iG--~~ 709 (829)
++.|+...+-|.|.+.|.-+++++| .|++.++++|++-...-|......-. ..+.++-| ..
T Consensus 83 ~~~~v~t~~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~tg~~~~ 162 (191)
T TIGR00493 83 IKPDVSTICIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANHTGQSLE 162 (191)
T ss_pred cCCCEEEEEEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHHHCcCHH
Confidence 3456666677999999988887655 68999999999876543321100000 11222223 45
Q ss_pred HHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396 710 LSREILFTASEFKGKELKERGISMPVLP 737 (829)
Q Consensus 710 ~a~e~ll~g~~~~a~eA~~~GLv~~v~~ 737 (829)
...+++-.+..++++||+++||+|+|+.
T Consensus 163 ~i~~~~~~~~~lta~EA~~~GliD~ii~ 190 (191)
T TIGR00493 163 QIEKDTERDFFMSAEEAKEYGLIDSVLT 190 (191)
T ss_pred HHHHHhhCCccCcHHHHHHcCCccEEec
Confidence 5666677778899999999999999874
No 259
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=96.62 E-value=0.0054 Score=59.78 Aligned_cols=90 Identities=16% Similarity=0.175 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCCc----ce
Q psy11396 203 QRLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQGP----CL 278 (829)
Q Consensus 203 ~~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp----~~ 278 (829)
.-|++.|++.+|++.++++++|. -+++||-.+-.. .-.++..+...||+.|. .+
T Consensus 54 vTmA~nAa~~ll~~~~id~~~Ig----~l~vgTES~vD~------------------sKs~~t~v~~ll~~s~~~~~~~~ 111 (174)
T PF01154_consen 54 VTMAANAAKPLLDRYNIDPDDIG----RLIVGTESGVDK------------------SKSISTYVHQLLGLSGNPDCRGV 111 (174)
T ss_dssp HHHHHHHHHTTHHHHT-HHHHEE----EEEEE-SS-SBS------------------SS-HHHHHHHHTTTTT-SSSEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHcc----EEEEeccccccc------------------cccHHHHHHHHhCcCCCCceeee
Confidence 45899999999999888777765 577776543211 11256678888998553 24
Q ss_pred eeccchhhHHHHHHHHHHHHHcCCCC--EEEEeccccc
Q psy11396 279 AIDTACSSSLVAIAHACDSLILGNSK--IALAGGVYII 314 (829)
Q Consensus 279 tv~~acsSgl~Al~~A~~~I~~G~~d--~aLvgG~e~~ 314 (829)
-+-.+|-+|..||..|+.+|+++..+ .+||.+.|..
T Consensus 112 e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA 149 (174)
T PF01154_consen 112 EMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIA 149 (174)
T ss_dssp EEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE
T ss_pred ehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEecccc
Confidence 57899999999999999999999765 8999999974
No 260
>CHL00124 acpP acyl carrier protein; Validated
Probab=96.55 E-value=0.0011 Score=57.02 Aligned_cols=69 Identities=10% Similarity=0.074 Sum_probs=56.6
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL 101 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~ 101 (829)
+.+-|..+++.++|.+ ++.|.++..|..++|+ ||+..+||-.+|+..+|+.+|.....+.+|...+..+
T Consensus 6 i~~~l~~ii~~~~~~~-~~~i~~d~~l~~dlg~-DSl~~~eli~~le~~f~i~i~~~~~~~~~tv~~l~~~ 74 (82)
T CHL00124 6 IFEKVQSIVAEQLGIE-KSEVTLDANFTRDLGA-DSLDVVELVMAIEEKFDIEIPDEDAEKISTLQEAVDF 74 (82)
T ss_pred HHHHHHHHHHHHHCCC-HHHCCCCcchhhhcCC-cHHHHHHHHHHHHHHHCCccCHHHHHHcCCHHHHHHH
Confidence 4555666677778774 5679999999856999 9999999999999999999999887777777665544
No 261
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=96.51 E-value=0.0063 Score=65.02 Aligned_cols=91 Identities=14% Similarity=0.117 Sum_probs=64.9
Q ss_pred CCCCEEEEecccccchhh-hhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396 649 CKIPVIAAMQGHAIGAGW-AMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK 727 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~-~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~ 727 (829)
...|.|+++.|+|+||+. .+++.+|++++.+++.+++...++ +...++. + + ..+.-+++-+.
T Consensus 193 a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGprv-----------ie~~~~e----~-l-pe~~~~ae~~~ 255 (292)
T PRK05654 193 AGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGPRV-----------IEQTVRE----K-L-PEGFQRAEFLL 255 (292)
T ss_pred CCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCHHH-----------HHhhhhh----h-h-hhhhcCHHHHH
Confidence 578999999999999976 468889999998888777643321 1111111 1 1 11122567788
Q ss_pred HcCCcccccChhhHHHHHHHHHHHHhcCC
Q psy11396 728 ERGISMPVLPRKQVLFYSLKLAKKLSLLS 756 (829)
Q Consensus 728 ~~GLv~~v~~~~~l~~~~~~~a~~i~~~~ 756 (829)
+.|+||.|+++.++.+...++++.+...+
T Consensus 256 ~~G~vD~Vv~~~e~r~~l~~~L~~~~~~~ 284 (292)
T PRK05654 256 EHGAIDMIVHRRELRDTLASLLALHTKQP 284 (292)
T ss_pred hCCCCcEEECHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999998888888775543
No 262
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=96.42 E-value=0.0035 Score=60.87 Aligned_cols=99 Identities=17% Similarity=0.118 Sum_probs=61.9
Q ss_pred CCCCEEEEecccccchhhhhhhccccccccccceecccccc------------ccccCCCcc-----eecccc-cc----
Q psy11396 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMR------------YGFTPGAGS-----TLIFPQ-RF---- 706 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~------------~Gl~p~~g~-----~~~l~r-~i---- 706 (829)
..||+||.++|.|..++..++.+||-+++.+.+.++...+. +|+-+..-- ....++ -+
T Consensus 5 ~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s~~~ 84 (154)
T PF01343_consen 5 SGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMSEEE 84 (154)
T ss_dssp TT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--HHH
T ss_pred cCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCCHHH
Confidence 58999999999999999999999999999999887764433 232211100 000000 00
Q ss_pred -------------------------CHHHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHH
Q psy11396 707 -------------------------GKILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSLKL 748 (829)
Q Consensus 707 -------------------------G~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~ 748 (829)
..... +-++.|..|++++|++.||||++...+++.+.+.+.
T Consensus 85 r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v-~~~~~~~~~~~~~A~~~GLiD~i~~~~~~~~~l~~~ 150 (154)
T PF01343_consen 85 RENLQELLDELYDQFVNDVAEGRGLSPDDV-EEIADGGVFTAQQALELGLIDEIGTFDEAIARLAKL 150 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTS-HHHH-HCHHCCHEEEHHHHHHTTSSSEETSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCHHHH-HHHHhhccccHHHHHHcCchhhcCCHHHHHHHHHHH
Confidence 01111 226788999999999999999998777776655543
No 263
>PRK11778 putative inner membrane peptidase; Provisional
Probab=96.26 E-value=0.0042 Score=67.24 Aligned_cols=98 Identities=18% Similarity=0.218 Sum_probs=66.2
Q ss_pred CCCCEEEEecccccchhhhhhhccccccccccceecccccc------------ccccCCCcc--------eec-------
Q psy11396 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMR------------YGFTPGAGS--------TLI------- 701 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~------------~Gl~p~~g~--------~~~------- 701 (829)
..||+|+.+.+.|.-||..++++||-+++.+.+.++...+. +|+-+..-. ..+
T Consensus 153 ~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~~~~~~~lLeKlGI~~evi~aG~yK~a~~pf~~~see~ 232 (330)
T PRK11778 153 AGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQIPNFHRLLKKHDIDVELHTAGEYKRTLTLFGENTEEG 232 (330)
T ss_pred cCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeeeccCHHHHHHHCCCceEEEEecCccCCCCCCCCCCHHH
Confidence 57999999999999999999999999999999887664442 222111000 000
Q ss_pred ---ccccc-------------CH-HHHHHHHhcCCccCHHHHHHcCCcccccChhhHHHHHH
Q psy11396 702 ---FPQRF-------------GK-ILSREILFTASEFKGKELKERGISMPVLPRKQVLFYSL 746 (829)
Q Consensus 702 ---l~r~i-------------G~-~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~ 746 (829)
+...+ ++ ....+-+.+|+.|++++|++.||||++...+++.....
T Consensus 233 Re~~q~~Ld~~y~~F~~~Va~~R~~l~~~~va~G~v~~g~~Al~~GLVD~Ig~~dd~i~~~~ 294 (330)
T PRK11778 233 REKFREELEETHQLFKDFVQRYRPQLDIDKVATGEHWYGQQALELGLVDEIQTSDDYLLELM 294 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHhCCCcCHHHHHHCCCCCcCCCHHHHHHHHH
Confidence 00000 00 01123467899999999999999999998776654433
No 264
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=96.16 E-value=0.0096 Score=62.77 Aligned_cols=87 Identities=20% Similarity=0.186 Sum_probs=56.8
Q ss_pred CCEEEEeccc--ccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCH--HHHHHHHhcCCccCHHHH
Q psy11396 651 IPVIAAMQGH--AIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGK--ILSREILFTASEFKGKEL 726 (829)
Q Consensus 651 kp~Iaav~G~--a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~--~~a~e~ll~g~~~~a~eA 726 (829)
.|+|+++.|+ |+||+..++.+||++|+++++++++....+ +-...|. -...+--+..+.+.++..
T Consensus 137 vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~aGP~V-----------Ie~~~G~e~~~~~d~~l~~~~lGG~~~ 205 (274)
T TIGR03133 137 VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLSGPEV-----------IEQEAGVEEFDSRDRALVWRTTGGKHR 205 (274)
T ss_pred CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEeccCHHH-----------HHHhcCCCccCHHHhcccccccchHhH
Confidence 8999999999 899999999999999999988777633221 1111111 011222222344556677
Q ss_pred HHcCCcccccChh--hHHHHHHHH
Q psy11396 727 KERGISMPVLPRK--QVLFYSLKL 748 (829)
Q Consensus 727 ~~~GLv~~v~~~~--~l~~~~~~~ 748 (829)
...|++|.+++++ .+...+.++
T Consensus 206 ~~sG~~D~~v~dd~~a~~~~~~~~ 229 (274)
T TIGR03133 206 FLSGDADVLVEDDVDAFRAAVIAA 229 (274)
T ss_pred hhcccceEEeCCHHHHHHHHHHHH
Confidence 7899999999864 344444433
No 265
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=96.12 E-value=0.015 Score=61.77 Aligned_cols=87 Identities=17% Similarity=0.123 Sum_probs=60.0
Q ss_pred CCCCEEEEecccccchhhh-hhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396 649 CKIPVIAAMQGHAIGAGWA-MGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK 727 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~~-lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~ 727 (829)
-..|.|+++.|+|.||+.. +++.||++|+.+++.+++...++= -..+|.. +.-.-=+++-.+
T Consensus 206 ~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGPrVI-----------e~t~ge~------lpe~fq~ae~l~ 268 (296)
T CHL00174 206 KKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVI-----------EQTLNKT------VPEGSQAAEYLF 268 (296)
T ss_pred CCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCHHHH-----------HHhcCCc------CCcccccHHHHH
Confidence 4689999999999999875 577899999877777666433210 0001100 000112467788
Q ss_pred HcCCcccccChhhHHHHHHHHHHHH
Q psy11396 728 ERGISMPVLPRKQVLFYSLKLAKKL 752 (829)
Q Consensus 728 ~~GLv~~v~~~~~l~~~~~~~a~~i 752 (829)
+.|+||.||++.+|.+.+.++++-+
T Consensus 269 ~~G~vD~iV~r~~lr~~l~~ll~~~ 293 (296)
T CHL00174 269 DKGLFDLIVPRNLLKGVLSELFQLH 293 (296)
T ss_pred hCcCceEEEcHHHHHHHHHHHHHhh
Confidence 9999999999999988777776543
No 266
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=96.05 E-value=0.0091 Score=61.02 Aligned_cols=87 Identities=15% Similarity=-0.082 Sum_probs=61.5
Q ss_pred CCCCEEEEecccccchhhhhhhcccc--ccccccceeccccccccccCCCccee-----------------ccccccC--
Q psy11396 649 CKIPVIAAMQGHAIGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGSTL-----------------IFPQRFG-- 707 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~~~-----------------~l~r~iG-- 707 (829)
++-|+...+-|.|.+.|..+++++|. |++.++++|++-...-|.. +-..- .+.+.-|
T Consensus 111 ~~~~V~tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~--G~a~di~i~a~el~~~~~~i~~iya~~TG~~ 188 (221)
T PRK14514 111 ISSDVATICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQ--GQASDIEITAREIQKLKKELYTIIADHSGTP 188 (221)
T ss_pred cCCCEEEEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccC--CCcchHHHHHHHHHHHHHHHHHHHHHHHCcC
Confidence 56688999999999999999999996 8888898888776543321 11110 0111112
Q ss_pred HHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396 708 KILSREILFTASEFKGKELKERGISMPVLP 737 (829)
Q Consensus 708 ~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~ 737 (829)
.....+.+-....++|+||+++||||+|+.
T Consensus 189 ~e~I~~~~~rd~wmtA~EA~eyGliD~Vi~ 218 (221)
T PRK14514 189 FDKVWADSDRDYWMTAQEAKEYGMIDEVLI 218 (221)
T ss_pred HHHHHHHhhcCccCCHHHHHHcCCccEEee
Confidence 334445555667799999999999999985
No 267
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=96.02 E-value=0.011 Score=59.53 Aligned_cols=89 Identities=17% Similarity=0.081 Sum_probs=63.7
Q ss_pred CCCCEEEEecccccchhhhhhhcccc--ccccccceeccccccccccCCCccee-----------------ccccccC--
Q psy11396 649 CKIPVIAAMQGHAIGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGSTL-----------------IFPQRFG-- 707 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~~~-----------------~l~r~iG-- 707 (829)
++-|+...+.|.|.+.+..+++++|- |++.+++++.+-....|. .+.... .+.++-|
T Consensus 84 ~~~~V~Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~--~G~a~di~~~a~el~~~~~~l~~iya~~Tg~~ 161 (201)
T PRK14513 84 IKAPVSTICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGF--RGNTPDLEVQAKEVLFLRDTLVDIYHRHTDLP 161 (201)
T ss_pred cCCCEEEEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcC
Confidence 56688899999999999999999996 899999999887765443 111111 1112222
Q ss_pred HHHHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396 708 KILSREILFTASEFKGKELKERGISMPVLPRK 739 (829)
Q Consensus 708 ~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~ 739 (829)
.....+++-....++|+||+++||||+|+++.
T Consensus 162 ~~~I~~~~~rd~~msa~EA~eyGliD~I~~~~ 193 (201)
T PRK14513 162 HEKLLRDMERDYFMSPEEAKAYGLIDSVIEPT 193 (201)
T ss_pred HHHHHHHhccCcccCHHHHHHcCCCcEEeccC
Confidence 33444555556679999999999999998653
No 268
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=95.94 E-value=0.027 Score=66.63 Aligned_cols=86 Identities=15% Similarity=0.141 Sum_probs=60.9
Q ss_pred cccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhh
Q psy11396 587 STVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGW 666 (829)
Q Consensus 587 ~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~ 666 (829)
...+.++.++++.+.+|+.+++|||.-.+ +.|+....+.........+ ....||+||..++.+ -+|.
T Consensus 75 ~~~l~~i~~~i~~A~~D~~IkgIvL~i~~---~~g~~~~~~~ei~~ai~~f---------k~sgKpVvA~~~~~~-s~~Y 141 (584)
T TIGR00705 75 AISLFDIVNAIRQAADDRRIEGLVFDLSN---FSGWDSPHLVEIGSALSEF---------KDSGKPVYAYGTNYS-QGQY 141 (584)
T ss_pred CcCHHHHHHHHHHHhcCCCceEEEEEccC---CCCCCHHHHHHHHHHHHHH---------HhcCCeEEEEEcccc-chhh
Confidence 44578899999999999999999998542 1244443333332222221 125799999888765 5678
Q ss_pred hhhhccccccccccceecc
Q psy11396 667 AMGLFCDYTIFSEESVYQS 685 (829)
Q Consensus 667 ~lal~cD~~ia~~~a~f~~ 685 (829)
.++.+||-+++.+...+++
T Consensus 142 ylAs~AD~I~~~p~G~v~~ 160 (584)
T TIGR00705 142 YLASFADEIILNPMGSVDL 160 (584)
T ss_pred hhhhhCCEEEECCCceEEe
Confidence 8999999999999877654
No 269
>PRK07639 acyl carrier protein; Provisional
Probab=95.94 E-value=0.01 Score=51.45 Aligned_cols=57 Identities=12% Similarity=0.077 Sum_probs=48.1
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCce
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTI 88 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~ 88 (829)
+.+-+++++...++.+..+.+.++..|..++|+ ||+.++||--.|+..+|+++|..-
T Consensus 6 i~~~i~~il~e~l~~~~~~~i~~d~~l~edL~l-DSld~velv~~lE~~fgi~i~d~~ 62 (86)
T PRK07639 6 LKNAVLKIMEEKLELKNVTHLEETMRLNEDLYI-DSVMMLQLIVYIEMDVKLCVPEDE 62 (86)
T ss_pred HHHHHHHHHHHHhCCCccccCCCCCCcccccCC-ChHHHHHHHHHHHHHHCCccCHHH
Confidence 344556666677777666789999999988999 999999999999999999999874
No 270
>PRK05883 acyl carrier protein; Validated
Probab=95.91 E-value=0.0053 Score=53.76 Aligned_cols=78 Identities=6% Similarity=0.078 Sum_probs=62.3
Q ss_pred cccCCCchhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccc
Q psy11396 18 FDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLK 97 (829)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a 97 (829)
|......+++...| .++++.+||. +++.|.++..|..++|+ |||..++|--.|+..+|++++.....+.+|...
T Consensus 6 ~~~~~~~~~I~~~l----~~iia~~l~v-~~~~I~~d~~l~~dlg~-DSL~~v~lv~~lE~~fgI~i~~ee~~~~~TV~d 79 (91)
T PRK05883 6 FAMTSSPSTVSATL----LSILRDDLNV-DLTRVTPDARLVDDVGL-DSVAFAVGMVAIEERLGVALSEEDLLSCDTVGD 79 (91)
T ss_pred cCCCCCHHHHHHHH----HHHHHHHhCC-ChhhCCCCCchhhccCC-ChHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHH
Confidence 44445556655544 5566677887 46789999999779999 999999999999999999999998888888776
Q ss_pred cccc
Q psy11396 98 SKNL 101 (829)
Q Consensus 98 ~~~~ 101 (829)
+..+
T Consensus 80 l~~~ 83 (91)
T PRK05883 80 LEAA 83 (91)
T ss_pred HHHH
Confidence 6554
No 271
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=95.85 E-value=0.013 Score=58.96 Aligned_cols=89 Identities=18% Similarity=-0.028 Sum_probs=60.2
Q ss_pred CCCCEEEEecccccchhhhhhhcccc--ccccccceeccccccccccCCCcc----------------eeccccccC--H
Q psy11396 649 CKIPVIAAMQGHAIGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGS----------------TLIFPQRFG--K 708 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~----------------~~~l~r~iG--~ 708 (829)
++-|+...+-|.|.+.+..+++++|- |++.+++++++-...-|. -+... ...+.++-| .
T Consensus 82 ~~~~V~t~~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~-~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~ 160 (196)
T PRK12551 82 VKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGA-RGQASDIRIQADEILFLKERLNTELSERTGQPL 160 (196)
T ss_pred cCCCEEEEEEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCccc-CCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCH
Confidence 56678888899999999999999885 788888888876654221 11000 000111112 2
Q ss_pred HHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396 709 ILSREILFTASEFKGKELKERGISMPVLPR 738 (829)
Q Consensus 709 ~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~ 738 (829)
....+++-....++|+||+++||||+|++.
T Consensus 161 ~~i~~~~~rd~~msa~EA~eyGliD~I~~~ 190 (196)
T PRK12551 161 ERIQEDTDRDFFMSPSEAVEYGLIDLVIDK 190 (196)
T ss_pred HHHHHHhhcCcCCCHHHHHHcCCCcEEecc
Confidence 344455555567999999999999999864
No 272
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=95.82 E-value=0.014 Score=62.06 Aligned_cols=88 Identities=16% Similarity=0.129 Sum_probs=63.0
Q ss_pred CCCCEEEEecccccchhh-hhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396 649 CKIPVIAAMQGHAIGAGW-AMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK 727 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~-~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~ 727 (829)
...|.|+++.|+|.||+. .+++.+|++++.+++.+++...++ +.+.+|.. +.-+.=+++-++
T Consensus 192 ~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGprV-----------ie~ti~e~------lpe~~q~ae~~~ 254 (285)
T TIGR00515 192 RGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPRV-----------IEQTVREK------LPEGFQTSEFLL 254 (285)
T ss_pred CCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHHH-----------HHHHhcCc------cchhcCCHHHHH
Confidence 578999999999999976 467899999999988877744431 11111110 001122556688
Q ss_pred HcCCcccccChhhHHHHHHHHHHHHh
Q psy11396 728 ERGISMPVLPRKQVLFYSLKLAKKLS 753 (829)
Q Consensus 728 ~~GLv~~v~~~~~l~~~~~~~a~~i~ 753 (829)
+.|+||.|+++.++.+...++.+.+.
T Consensus 255 ~~G~vD~iv~~~~~r~~l~~~L~~~~ 280 (285)
T TIGR00515 255 EHGAIDMIVHRPEMKKTLASLLAKLQ 280 (285)
T ss_pred hCCCCcEEECcHHHHHHHHHHHHHHh
Confidence 99999999999999988888777654
No 273
>TIGR00517 acyl_carrier acyl carrier protein. S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site.
Probab=95.78 E-value=0.0045 Score=52.45 Aligned_cols=67 Identities=10% Similarity=0.108 Sum_probs=54.1
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccc
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSK 99 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~ 99 (829)
+.+-+.+.++.++|.+ ++.+.++..|..++|+ ||+..+||--.|+..+|+.+|..-.....|...+.
T Consensus 4 i~~~l~~il~~~~~~~-~~~i~~~~~l~~dlgl-DSl~~veli~~lE~~f~i~i~~~~~~~~~tv~~l~ 70 (77)
T TIGR00517 4 IFEKVKAIIKEQLNVD-EDQVTPDASFVEDLGA-DSLDTVELVMALEEEFDIEIPDEEAEKIATVGDAV 70 (77)
T ss_pred HHHHHHHHHHHHHCCC-HHHCCCCcchhhhcCC-cHHHHHHHHHHHHHHHCCCCCHHHHHHCCcHHHHH
Confidence 3455667777778874 5689999999779999 99999999999999999999988766666655443
No 274
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=95.76 E-value=0.029 Score=58.27 Aligned_cols=82 Identities=22% Similarity=0.338 Sum_probs=62.9
Q ss_pred cccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHH
Q psy11396 646 PLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKE 725 (829)
Q Consensus 646 ~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~e 725 (829)
+..++.|+||.|=|---+||.--...+|.+++-++++++. +.|.++++..|-.- .++.+. ...-.+|+++
T Consensus 184 m~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~AsILWkD~---~ka~eA-Ae~mkita~d 253 (317)
T COG0825 184 MARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGCASILWKDA---SKAKEA-AEAMKITAHD 253 (317)
T ss_pred HhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhhhhhhhcCh---hhhHHH-HHHcCCCHHH
Confidence 4458999999999977777766566689999999998874 56777766555433 444443 3346899999
Q ss_pred HHHcCCcccccC
Q psy11396 726 LKERGISMPVLP 737 (829)
Q Consensus 726 A~~~GLv~~v~~ 737 (829)
.+++||||.|+|
T Consensus 254 Lk~lgiID~II~ 265 (317)
T COG0825 254 LKELGIIDGIIP 265 (317)
T ss_pred HHhCCCcceecc
Confidence 999999999997
No 275
>PRK12449 acyl carrier protein; Provisional
Probab=95.64 E-value=0.0072 Score=51.60 Aligned_cols=68 Identities=13% Similarity=-0.002 Sum_probs=54.0
Q ss_pred HHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396 32 KKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL 101 (829)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~ 101 (829)
.+-+.+++..+++.+ +..+.++..|..++|+ ||+..++|--.|+..+|+.+|+.-.++.+|...+..+
T Consensus 7 ~~~l~~il~~~~~~~-~~~i~~~~~l~~dlg~-DSl~~~~li~~lE~~f~i~i~~~~~~~~~ti~~l~~~ 74 (80)
T PRK12449 7 FERLINLIQKQRSYL-SLAITEQTHLKDDLAV-DSIELVEFIINVEDEFHIAIPDEDVEDMVSMGDLLDY 74 (80)
T ss_pred HHHHHHHHHHHhCCC-ccccCCCCcHHHHcCC-cHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHH
Confidence 334445555666654 4589999999779999 9999999999999999999999888888777655443
No 276
>PRK07081 acyl carrier protein; Provisional
Probab=95.55 E-value=0.006 Score=52.50 Aligned_cols=65 Identities=9% Similarity=0.026 Sum_probs=51.3
Q ss_pred HHhhhHHhhhhccCC-CCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecc--ccccccc
Q psy11396 32 KKNNSKIINDTISYD-NSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYD--NSKKLKS 98 (829)
Q Consensus 32 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd--~pt~~a~ 98 (829)
++-+++++..+++.. +++.++++..|. ++|+ ||+.+++|.-.|+..+|+.+|...... .+|...+
T Consensus 2 ~~~i~~ii~~~~~~~~~~~~i~~d~~l~-dlGl-DSl~~v~li~~lE~~f~I~i~~~~~~~~~~~tv~~l 69 (83)
T PRK07081 2 KNTIRTILKKVAKLEVPIDSIADDADLY-EAGL-SSLATVQLMLAIEDAFDIEIPDEMLNRKLFASIDAL 69 (83)
T ss_pred hHHHHHHHHHHHcCCCCHHhcCCCCCHh-hcCC-CHHHHHHHHHHHHHHhCCcCCHHHcCHHHhccHHHH
Confidence 344566777776665 567999999999 9999 999999999999999999999986532 4444443
No 277
>PRK09184 acyl carrier protein; Provisional
Probab=95.53 E-value=0.0091 Score=51.98 Aligned_cols=70 Identities=9% Similarity=0.027 Sum_probs=56.0
Q ss_pred HHHhhhHHhhhhccC--CCCCCCcCCCcc-cccccccccccHHHHHHHHhhhcCccccCc---eecccccccccccc
Q psy11396 31 IKKNNSKIINDTISY--DNSKKLKSKNLS-INNDDFDKSINNDDIDKSIKKNNSKIINDT---ISYDNSKKLKSKNL 101 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t---~~fd~pt~~a~~~~ 101 (829)
|.+-+.++|+..||- -+++.|.++..| ..+||+ |||-++||.-.|+..+|+++++. ..+..+|...++.+
T Consensus 7 l~~~l~~~I~e~l~~~~i~~~~I~~d~~l~~~dLgl-DSld~velv~~lE~~fgi~i~~~~~~~~~~~~TV~~l~~~ 82 (89)
T PRK09184 7 LERELAELIVEELNLEDVQPESIDADAPLYGEGLGL-DSIDILEIALVISKRYGFQLRSDNPDNQRIFASLRALAAY 82 (89)
T ss_pred HHHHHHHHHHHHHCCCCCCHHHCCCCcccccccCCC-cHHHHHHHHHHHHHHHCCcCCCcchhhhhccCCHHHHHHH
Confidence 556677888899986 478899999997 437999 99999999999999999999753 34456776666554
No 278
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=95.41 E-value=0.024 Score=58.89 Aligned_cols=50 Identities=20% Similarity=0.143 Sum_probs=45.8
Q ss_pred ccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCC
Q psy11396 647 LYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGA 696 (829)
Q Consensus 647 ~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~ 696 (829)
..++.++++.|+..|..+|.-++++||-+++.+++.+|-...++|-.|..
T Consensus 115 ~~~~~~v~v~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~ 164 (285)
T PF01972_consen 115 REHPAKVTVIVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAA 164 (285)
T ss_pred HhCCCCEEEEECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChH
Confidence 34788999999999999999999999999999999999999999987754
No 279
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=95.39 E-value=0.045 Score=47.77 Aligned_cols=89 Identities=15% Similarity=0.241 Sum_probs=54.7
Q ss_pred HHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCC
Q psy11396 403 YKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLP 482 (829)
Q Consensus 403 l~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ip 482 (829)
|+++|++++|||++.+|-.... -.+.+.+.++- ..+..+ ... ..+||+.+|+-.+.+..+ ++.|.+.
T Consensus 1 L~~~g~~~~did~~i~hq~~~~-----~~~~~~~~lgi---~~~~~~-~~~-~~~Gn~~sa~~~~~L~~~---~~~g~~~ 67 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKK-----ILDSIAKRLGI---PPERFP-DNL-AEYGNTGSASIPINLADA---LEEGRIK 67 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHH-----HHHHHHHHHTS----GGGBE--TH-HHH-B-GGGHHHHHHHHH---HHTTSSC
T ss_pred CccccCCHHHCCEEEeCCCCHH-----HHHHHHHHcCC---cHHHHH-HHH-hccCcchhhhHHHHHHHH---HHcCCCC
Confidence 6889999999999999955432 23345555542 111122 222 567999999977777654 4444332
Q ss_pred CCCCCCCCCccCCcCCCCeeeccccccccccccCccEEEEeccCCCCceEEEEee
Q psy11396 483 PTINYNILNEHIKLENSPFFINTKCKSWDIKNKKKRMAAINSFGFSGTNAHIVLM 537 (829)
Q Consensus 483 p~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~a~v~s~G~gG~na~~vl~ 537 (829)
+..++++-++|.|.+-++++++
T Consensus 68 ---------------------------------~Gd~vl~~~~G~G~~~~~~~~~ 89 (90)
T PF08541_consen 68 ---------------------------------PGDRVLLVGFGAGFSWGAAVLR 89 (90)
T ss_dssp ---------------------------------TTEEEEEEEEETTTEEEEEEEE
T ss_pred ---------------------------------CCCEEEEEEEEhhheeEEEEEE
Confidence 2356889999999999998886
No 280
>PRK05350 acyl carrier protein; Provisional
Probab=95.32 E-value=0.0091 Score=51.28 Aligned_cols=67 Identities=13% Similarity=0.096 Sum_probs=53.0
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccc
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSK 99 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~ 99 (829)
+.+.|.++++.+++. +++.|.++..|..++|+ |||..+||--.|+..+|++++.....+.+|.....
T Consensus 7 i~~~v~~ii~~~~~~-~~~~i~~d~~l~~dlg~-DSld~veli~~lE~~fgI~i~~~~~~~~~Tv~dlv 73 (82)
T PRK05350 7 ILERLRAILVELFEI-DPEDITPEANLYEDLDL-DSIDAVDLVVHLQKLTGKKIKPEEFKSVRTVQDVV 73 (82)
T ss_pred HHHHHHHHHHHHhCC-CHHHCCCCccchhhcCC-CHHHHHHHHHHHHHHHCCccCHHHHhhcCcHHHHH
Confidence 444555666666765 55789999997669999 99999999999999999999988766666655443
No 281
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=94.79 E-value=0.015 Score=76.85 Aligned_cols=70 Identities=4% Similarity=-0.024 Sum_probs=62.5
Q ss_pred HHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396 29 KSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL 101 (829)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~ 101 (829)
..+.+.+.++...+||.. ++.++++..|. ++|+ |||.+++|+++|++..|+.++.+..|++||...++.+
T Consensus 847 ~~~~~~l~~~~~~vl~~~-~~~i~~~~~ff-~lGg-dSL~a~~l~~~l~~~~~~~l~~~~i~~~~ti~~la~~ 916 (1389)
T TIGR03443 847 TETEREIRDLWLELLPNR-PATISPDDSFF-DLGG-HSILATRMIFELRKKLNVELPLGLIFKSPTIKGFAKE 916 (1389)
T ss_pred CHHHHHHHHHHHHHhCCC-ccccCcCcchh-hcCc-cHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHH
Confidence 346677888899999985 56799999999 9999 9999999999999999999999999999998877664
No 282
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=94.71 E-value=0.033 Score=57.77 Aligned_cols=83 Identities=16% Similarity=0.075 Sum_probs=54.2
Q ss_pred CCCCEEEEecccccchhh-hhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcC--CccCHHH
Q psy11396 649 CKIPVIAAMQGHAIGAGW-AMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTA--SEFKGKE 725 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~-~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g--~~~~a~e 725 (829)
.+.|+|+.|-|.++|||+ .+.+.+|.+++.+++ .+++.+..+++..+-+-. ..+.++.-.= -..+.+.
T Consensus 106 ~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~A-------~i~vm~~e~aa~I~~~~~--~~~~e~a~~~~~~a~~~~~ 176 (238)
T TIGR03134 106 AGHPVIGLIYGKAISGAFLAHGLQADRIIALPGA-------MVHVMDLESMARVTKRSV--EELEALAKSSPVFAPGIEN 176 (238)
T ss_pred CCCCEEEEEeCCccHHHHHHHccCcCeEEEcCCc-------EEEecCHHHHHHHHccCH--hHHHHHHHhhhhhccCHHH
Confidence 679999999999999987 455567887766555 455544444333232322 3344432221 2356778
Q ss_pred HHHcCCcccccChhh
Q psy11396 726 LKERGISMPVLPRKQ 740 (829)
Q Consensus 726 A~~~GLv~~v~~~~~ 740 (829)
++++|+||+|+++.+
T Consensus 177 ~~~~G~vd~vi~~~~ 191 (238)
T TIGR03134 177 FVKLGGVHALLDVAD 191 (238)
T ss_pred HHhCCCccEEeCCCC
Confidence 999999999998554
No 283
>COG0236 AcpP Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.55 E-value=0.022 Score=48.62 Aligned_cols=66 Identities=11% Similarity=0.145 Sum_probs=55.6
Q ss_pred HHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccc
Q psy11396 29 KSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKL 96 (829)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~ 96 (829)
..+++-+.+.+..+|+-. +..+.++..|..++|+ |||-++||--.|+..+|+++|........|..
T Consensus 4 ~~~~~~i~~ii~e~l~~~-~~~i~~~~~~~~dlg~-DSld~veLi~~lE~~f~i~i~~e~~~~~~tv~ 69 (80)
T COG0236 4 EAIEERVKDIIAEQLGVD-EEEITTEASFVEDLGL-DSLDLVELVMALEEEFGIEIPDEELENIKTVG 69 (80)
T ss_pred HHHHHHHHHHHHHHhCCc-hhhcCcccccccccCc-cHHHHHHHHHHHHHHHCCcCCHHHHHHHHhHH
Confidence 346777888889999987 7789999999956999 99999999999999999999998764444443
No 284
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=94.38 E-value=0.052 Score=58.02 Aligned_cols=36 Identities=31% Similarity=0.507 Sum_probs=32.9
Q ss_pred CCEEEEeccc--ccchhhhhhhccccccccccceeccc
Q psy11396 651 IPVIAAMQGH--AIGAGWAMGLFCDYTIFSEESVYQSP 686 (829)
Q Consensus 651 kp~Iaav~G~--a~GgG~~lal~cD~~ia~~~a~f~~~ 686 (829)
.|+|+++.|+ |+||+...+.+||++|+++++++++.
T Consensus 146 VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~igla 183 (301)
T PRK07189 146 VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLS 183 (301)
T ss_pred CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEecc
Confidence 8999999999 99999999999999999998877663
No 285
>PRK07117 acyl carrier protein; Validated
Probab=94.35 E-value=0.047 Score=46.39 Aligned_cols=58 Identities=10% Similarity=0.007 Sum_probs=48.1
Q ss_pred HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCcee
Q psy11396 30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTIS 89 (829)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~ 89 (829)
.+.+-|+++|..++.--+++.+.++..|. |||. |||-.+||-..|...+|+.+|..-.
T Consensus 5 ei~~~v~~ii~e~~p~i~~~~I~~~~~l~-DLg~-DSlD~veiv~~led~f~i~I~~~~~ 62 (79)
T PRK07117 5 RIFDILVRHIREVLPDLDQHQFQPEDSLV-DLGA-NSMDRAEIVIMTLESLSLKIPLVEF 62 (79)
T ss_pred HHHHHHHHHHHHHcCCCCHHHCCCCCChh-hcCC-ChHHHHHHHHHHHHHHCCccCHHHH
Confidence 35566677777777433667999999997 9999 9999999999999999999987653
No 286
>PRK10949 protease 4; Provisional
Probab=94.09 E-value=0.16 Score=60.36 Aligned_cols=86 Identities=14% Similarity=0.154 Sum_probs=56.6
Q ss_pred cccccccccchhhhcccccceeeeeeCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhh
Q psy11396 587 STVVKGITDAFSYINSSVQYKVIIITGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGW 666 (829)
Q Consensus 587 ~~~~~eL~~~l~~~~~d~~vr~vVl~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~ 666 (829)
.-.+.++.++++.+.+|+.|++||+.-.+. .|.....+.........+ ....||+||.-.. +.-++.
T Consensus 94 ~~~l~div~~i~~Aa~D~rIkgivL~i~s~---gG~~~a~~~eI~~ai~~f---------k~sGKpVvA~~~~-~~s~~Y 160 (618)
T PRK10949 94 ENSLFDIVNTIRQAKDDRNITGIVLDLKNF---AGADQPSMQYIGKALREF---------RDSGKPVYAVGDS-YSQGQY 160 (618)
T ss_pred cccHHHHHHHHHHHhcCCCceEEEEEeCCC---CCccHHHHHHHHHHHHHH---------HHhCCeEEEEecC-ccchhh
Confidence 345778999999999999999999985432 122322222222211111 1257999985443 344678
Q ss_pred hhhhccccccccccceecc
Q psy11396 667 AMGLFCDYTIFSEESVYQS 685 (829)
Q Consensus 667 ~lal~cD~~ia~~~a~f~~ 685 (829)
.|+.+||-+++.+...+++
T Consensus 161 yLASaAD~I~l~P~G~v~~ 179 (618)
T PRK10949 161 YLASFANKIYLSPQGVVDL 179 (618)
T ss_pred hhhhhCCEEEECCCceEEE
Confidence 8999999999999877654
No 287
>PRK08172 putative acyl carrier protein IacP; Validated
Probab=93.94 E-value=0.051 Score=46.57 Aligned_cols=58 Identities=16% Similarity=0.119 Sum_probs=50.1
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceec
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISY 90 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~f 90 (829)
+.+-+.+.++.+|+.+ ++.|.++..|..++|+ |||-.++|--.|+..+|+.+|..-..
T Consensus 5 i~~~v~~iiae~l~v~-~~~i~~d~~l~~dL~~-DSld~v~lv~~lEe~F~I~i~~~d~~ 62 (82)
T PRK08172 5 IEARVKKVITSCIAVD-VDSINGQTHLVEDLYA-DSLDLIDIVFGLSEEFDISCNENDLP 62 (82)
T ss_pred HHHHHHHHHHHHHCCC-HHHCCCCcchhhhcCC-CHHHHHHHHHHHHHHHCCCcCHHHHH
Confidence 4566778888899885 5689999999889999 99999999999999999999876543
No 288
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=93.86 E-value=0.094 Score=52.37 Aligned_cols=90 Identities=19% Similarity=0.141 Sum_probs=55.3
Q ss_pred CCCCEEEEecccccchhhhhhhccccc--cccccceeccccccccccCCCcce-e---------------ccccccCHH-
Q psy11396 649 CKIPVIAAMQGHAIGAGWAMGLFCDYT--IFSEESVYQSPYMRYGFTPGAGST-L---------------IFPQRFGKI- 709 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~~lal~cD~~--ia~~~a~f~~~e~~~Gl~p~~g~~-~---------------~l~r~iG~~- 709 (829)
.+.||...+-|.|...|..|++++|.. ++.+++++..--.. |.+-+...- . .+...-|..
T Consensus 84 ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~-gg~~G~a~Di~i~A~ei~~~~~~l~~i~a~~TGq~~ 162 (200)
T COG0740 84 IKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPS-GGAQGQASDIEIHAREILKIKERLNRIYAEHTGQTL 162 (200)
T ss_pred cCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCC-ccCccCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 688899999999999999999998874 77777666655444 221111100 0 000000111
Q ss_pred -HHHHHHhcCCccCHHHHHHcCCcccccChh
Q psy11396 710 -LSREILFTASEFKGKELKERGISMPVLPRK 739 (829)
Q Consensus 710 -~a~e~ll~g~~~~a~eA~~~GLv~~v~~~~ 739 (829)
+-...+-....++|+||+++||||+|....
T Consensus 163 e~i~~d~drd~~msa~eA~~yGLiD~V~~~~ 193 (200)
T COG0740 163 EKIEKDTDRDTWMSAEEAKEYGLIDKVIESR 193 (200)
T ss_pred HHHHHhhcccccCCHHHHHHcCCcceecccc
Confidence 111122223458999999999999998754
No 289
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=93.66 E-value=0.23 Score=45.80 Aligned_cols=64 Identities=11% Similarity=0.094 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcCChHHHHHHHHHHhhc
Q psy11396 743 FYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVNNPSVITNIERYFDKS 807 (829)
Q Consensus 743 ~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~k~ 807 (829)
+.+.+..+.|...+|.++..+-+++++....++.+.+++|+.....++ ..+++.|++++.+--+
T Consensus 31 ~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E~~~a~~~~-~~~DF~EGVRA~LIDK 94 (118)
T PF13766_consen 31 EWAQKTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRMEYRLASRCM-RHPDFAEGVRALLIDK 94 (118)
T ss_dssp HHHHHHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHHHHHHHHHH-CCSCHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHh-ccchHHHHHHHHHhcC
Confidence 446667788899999999999999999999999999999999999999 6789999999988533
No 290
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=93.33 E-value=0.12 Score=52.85 Aligned_cols=88 Identities=19% Similarity=0.046 Sum_probs=59.4
Q ss_pred CCCCEEEEecccccchhhhhhhcccc--ccccccceeccccccccccCCCccee-----------------ccccccC--
Q psy11396 649 CKIPVIAAMQGHAIGAGWAMGLFCDY--TIFSEESVYQSPYMRYGFTPGAGSTL-----------------IFPQRFG-- 707 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~~lal~cD~--~ia~~~a~f~~~e~~~Gl~p~~g~~~-----------------~l~r~iG-- 707 (829)
++-++...+-|.|.+.+..+++++|- |++.++++|.+-....|.. +...- .+...-|
T Consensus 106 ik~~V~Tv~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~--G~A~di~~~a~el~~~r~~l~~iya~~TG~~ 183 (222)
T PRK12552 106 IKPPVHTICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR--GQATDIQIRAKEVLHNKRTMLEILSRNTGQT 183 (222)
T ss_pred cCCCeEEEEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc--cCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 55678888999999999999999996 8888999988877654421 11100 0111111
Q ss_pred HHHHHHHHhcCCccCHHHHHHcCCcccccCh
Q psy11396 708 KILSREILFTASEFKGKELKERGISMPVLPR 738 (829)
Q Consensus 708 ~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~~ 738 (829)
.....+.+-.-..++|+||+++||||+|+.+
T Consensus 184 ~e~I~~d~~rd~wmsA~EA~eyGliD~Ii~~ 214 (222)
T PRK12552 184 VEKLSKDTDRMFYLTPQEAKEYGLIDRVLES 214 (222)
T ss_pred HHHHHHHhcCCCcCCHHHHHHcCCCcEEecc
Confidence 1222333444456999999999999999864
No 291
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=92.99 E-value=0.15 Score=59.35 Aligned_cols=68 Identities=22% Similarity=0.333 Sum_probs=51.2
Q ss_pred CCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH--
Q psy11396 650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL-- 726 (829)
Q Consensus 650 ~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA-- 726 (829)
..|+|+++.|+|.|||..++..||++|+.++ +.+.+. |+...+ ..+|+.++.++.
T Consensus 131 ~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~--------------------GP~vv~--~~~Ge~~~~~~lgG 188 (493)
T PF01039_consen 131 GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLA--------------------GPRVVE--SATGEEVDSEELGG 188 (493)
T ss_dssp TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------THHHHH--HHHSSCTSHHHHHB
T ss_pred CCCeEEEEccccccchhhcccccCccccCccceEEEec--------------------cccccc--cccCccccchhhhh
Confidence 7899999999999999999999999999887 655442 222222 234677777653
Q ss_pred -----HHcCCcccccChh
Q psy11396 727 -----KERGISMPVLPRK 739 (829)
Q Consensus 727 -----~~~GLv~~v~~~~ 739 (829)
...|.+|.+++++
T Consensus 189 ~~~h~~~sG~~d~v~~de 206 (493)
T PF01039_consen 189 ADVHAAKSGVVDYVVDDE 206 (493)
T ss_dssp HHHHHHTSSSSSEEESSH
T ss_pred hhhhcccCCCceEEEech
Confidence 4789999999866
No 292
>PRK06508 acyl carrier protein; Provisional
Probab=92.64 E-value=0.12 Score=45.40 Aligned_cols=55 Identities=16% Similarity=0.117 Sum_probs=47.4
Q ss_pred HHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCce
Q psy11396 32 KKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTI 88 (829)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~ 88 (829)
.+-|.++++.+++. +++.|.++..|..+||+ |||-.++|--.|+..+|+++|..-
T Consensus 5 ~ekv~~Ilae~~~v-d~~~It~ds~~~edL~~-DSLd~veli~~lE~eFgI~i~~ee 59 (93)
T PRK06508 5 FDKVADIIAETSDI-PRDTITPESHTIDDLGI-DSLDFLDIVFAIDKAFGIKLPLEQ 59 (93)
T ss_pred HHHHHHHHHHHhCC-CHHHCCCCCcchhccCC-CHHHHHHHHHHHHHHHCCccCHHH
Confidence 34567777888887 55799999999889999 999999999999999999998754
No 293
>PRK05828 acyl carrier protein; Validated
Probab=92.31 E-value=0.16 Score=43.64 Aligned_cols=67 Identities=12% Similarity=-0.016 Sum_probs=48.7
Q ss_pred CchhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccc
Q psy11396 23 NNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKK 95 (829)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~ 95 (829)
.++|+-.++++.+.++ .++. +.+.+.++..|. |||+ |||..+||-..|+..+|+.+|..-...-.|.
T Consensus 2 ~~~eI~~~i~~ii~e~---~~~~-~~d~i~~~~~~~-dLg~-DSLd~velv~~lE~~f~I~i~~e~~~~i~Tv 68 (84)
T PRK05828 2 QEMEILLKIKEIAKKK---NFAV-TLDESNINKPYR-ELKI-DSLDMFSIIVSLESEFNIEFSDEKLMKLKNL 68 (84)
T ss_pred CHHHHHHHHHHHHHHh---ccCC-CcccccCCCCHH-hcCC-CHHHHHHHHHHHHHHHCCCcCHHHHHhCCCH
Confidence 3456666666655441 2333 446788889997 9999 9999999999999999999998654444443
No 294
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=91.64 E-value=0.094 Score=68.85 Aligned_cols=67 Identities=7% Similarity=-0.020 Sum_probs=60.4
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS 102 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~ 102 (829)
+.+.+.++.+.+||.. .++++..|. ++|. |||++++|..+|++.+|..++....|.+||...++.+.
T Consensus 979 ~e~~l~~~~~~~l~~~---~~~~~~~ff-~lGg-~Sl~a~~l~~~l~~~~~~~l~~~~~~~~pti~~la~~l 1045 (1296)
T PRK10252 979 TETIIAAAFSSLLGCD---VVDADADFF-ALGG-HSLLAMKLAAQLSRQFARQVTPGQVMVASTVAKLATLL 1045 (1296)
T ss_pred HHHHHHHHHHHHhCCC---CCCCCcCHH-HcCC-ChHHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHH
Confidence 4556778889999975 799999999 9999 99999999999999999999999999999998887764
No 295
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=90.94 E-value=0.42 Score=55.61 Aligned_cols=100 Identities=13% Similarity=0.054 Sum_probs=62.0
Q ss_pred cCCCCEEEEecccccchhhhhhh----ccccccccccceeccccccccccCCCcceeccccccC----HHHHHHHH---h
Q psy11396 648 YCKIPVIAAMQGHAIGAGWAMGL----FCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFG----KILSREIL---F 716 (829)
Q Consensus 648 ~~~kp~Iaav~G~a~GgG~~lal----~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG----~~~a~e~l---l 716 (829)
....|+|+.|-|.++|||+..+. .+|++++.++++++.-...- +....+.+.+. ...++.-. +
T Consensus 386 ~~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~~v~~pe~------a~~i~~~~~l~~~~~~~~~~~~~~~~~ 459 (512)
T TIGR01117 386 EATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEIAVMGPAG------AANIIFRKDIKEAKDPAATRKQKIAEY 459 (512)
T ss_pred hCCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeEeecCHHH------HHHHHhhhhcccccCHHHHHHHHHHHH
Confidence 36899999999999988754332 38998888777665533221 11111111111 11111111 1
Q ss_pred cCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHh
Q psy11396 717 TASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLS 753 (829)
Q Consensus 717 ~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~ 753 (829)
.-+..++..+.+.|+||.|+++.++.....+..+.+.
T Consensus 460 ~~~~~~~~~~a~~g~vD~VI~P~~tR~~l~~~l~~~~ 496 (512)
T TIGR01117 460 REEFANPYKAAARGYVDDVIEPKQTRPKIVNALAMLE 496 (512)
T ss_pred HHhhcCHHHHHhcCCCCeeEChHHHHHHHHHHHHHHh
Confidence 1234478899999999999999999887777666544
No 296
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=90.62 E-value=0.39 Score=55.89 Aligned_cols=81 Identities=16% Similarity=0.265 Sum_probs=53.9
Q ss_pred CCCEEEEecccccchhhhhhhccccccccccc-eeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHH--
Q psy11396 650 KIPVIAAMQGHAIGAGWAMGLFCDYTIFSEES-VYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKEL-- 726 (829)
Q Consensus 650 ~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a-~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA-- 726 (829)
..|.|+++.|+|.||+......|||+|+.+++ .+.+. |+...+. .+|+.+++++.
T Consensus 154 ~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~~a--------------------GP~vv~~--~~Ge~v~~e~lGG 211 (512)
T TIGR01117 154 VVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFIT--------------------GPQVIKT--VTGEEVTAEQLGG 211 (512)
T ss_pred CCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEEec--------------------ChHHHHh--hcCcccchhhcch
Confidence 47999999999999998777799999999863 33331 2222222 34555555554
Q ss_pred -----HHcCCcccccCh-hhHHHHHHHHHHHH
Q psy11396 727 -----KERGISMPVLPR-KQVLFYSLKLAKKL 752 (829)
Q Consensus 727 -----~~~GLv~~v~~~-~~l~~~~~~~a~~i 752 (829)
..-|++|.+++. ++..+.+++++.-+
T Consensus 212 a~~h~~~sGv~d~~~~de~ea~~~~r~~ls~l 243 (512)
T TIGR01117 212 AMAHNSVSGVAHFIAEDDDDCIMLIRRLLSFL 243 (512)
T ss_pred HHHhccccceeEEecCChHHHHHHHHHHHHhC
Confidence 257888888874 44555555555554
No 297
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=90.22 E-value=0.52 Score=55.29 Aligned_cols=82 Identities=21% Similarity=0.254 Sum_probs=53.5
Q ss_pred CCCCEEEEecccccchhhhhhhcccccccccc-ceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396 649 CKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEE-SVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK 727 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~-a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~ 727 (829)
...|.|++|.|+|.|||.....+||++|++++ +.+.+ .|+...+. .+|+.+++++.-
T Consensus 204 ~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~--------------------aGP~vV~~--~~Ge~v~~eeLG 261 (569)
T PLN02820 204 AGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFL--------------------AGPPLVKA--ATGEEVSAEDLG 261 (569)
T ss_pred CCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEEe--------------------cCHHHHHh--hcCcccCHHHhC
Confidence 56899999999999999999999999999875 43333 13333332 345666666653
Q ss_pred -------HcCCcccccChh-hHHHHHHHHHHHH
Q psy11396 728 -------ERGISMPVLPRK-QVLFYSLKLAKKL 752 (829)
Q Consensus 728 -------~~GLv~~v~~~~-~l~~~~~~~a~~i 752 (829)
.-|.++.+++.| +....+++++.-|
T Consensus 262 Ga~~h~~~sGv~d~~~~de~~a~~~~R~lls~L 294 (569)
T PLN02820 262 GADVHCKVSGVSDHFAQDELHALAIGRNIVKNL 294 (569)
T ss_pred CHHHhcccccccccccCchHHHHHHHHHHHHhc
Confidence 467777777654 2223334444333
No 298
>PTZ00171 acyl carrier protein; Provisional
Probab=89.50 E-value=0.42 Score=45.81 Aligned_cols=57 Identities=11% Similarity=0.134 Sum_probs=47.1
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCcee
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTIS 89 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~ 89 (829)
+.+-+.++++.+++. +++.|.++..|..|+|+ |||..+||--.|+..+|+.+|..-.
T Consensus 71 v~~~l~eiiae~l~v-d~~~I~~ds~~~~dLg~-DSLd~veLv~~LEdeFgI~Ipded~ 127 (148)
T PTZ00171 71 VLTRVKKVVKNFEKV-DASKITPESNFVKDLGA-DSLDVVELLIAIEQEFNLTIPDHDA 127 (148)
T ss_pred HHHHHHHHHHHHhCC-CHhhCCCCcchhhhcCC-CHHHHHHHHHHHHHHHCCccCHHHH
Confidence 445555666666765 46789999999889999 9999999999999999999998643
No 299
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=89.20 E-value=0.45 Score=52.93 Aligned_cols=95 Identities=11% Similarity=0.062 Sum_probs=66.2
Q ss_pred ccccccCCCCEEEEec---ccccchhhhhhhccccccccccceeccccccccc--cCCCcc--eeccc------ccc--C
Q psy11396 643 YCMPLYCKIPVIAAMQ---GHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGF--TPGAGS--TLIFP------QRF--G 707 (829)
Q Consensus 643 ~~~~~~~~kp~Iaav~---G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl--~p~~g~--~~~l~------r~i--G 707 (829)
...+...|.|++..|. ++|..+|..++|+||+..|.+++.++-...-.+- .+.... ..++. +.- .
T Consensus 78 v~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~~gRN 157 (436)
T COG1030 78 VRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEERGRN 157 (436)
T ss_pred HHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHHcCCC
Confidence 3445557889777665 4699999999999999999999888876544321 111111 11111 111 2
Q ss_pred HHHHHHHHhcCCccCHHHHHHcCCcccccC
Q psy11396 708 KILSREILFTASEFKGKELKERGISMPVLP 737 (829)
Q Consensus 708 ~~~a~e~ll~g~~~~a~eA~~~GLv~~v~~ 737 (829)
...|.+++.....++++||++.|++|-+..
T Consensus 158 ~~~ae~~v~~~~~l~a~eA~~~~vid~iA~ 187 (436)
T COG1030 158 PTWAERFVTENLSLTAEEALRQGVIDLIAR 187 (436)
T ss_pred hHHHHHHhhhccCCChhHHHhcCccccccC
Confidence 456788888899999999999999998875
No 300
>PRK12467 peptide synthase; Provisional
Probab=88.09 E-value=0.58 Score=68.13 Aligned_cols=66 Identities=6% Similarity=0.029 Sum_probs=58.8
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL 101 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~ 101 (829)
+.+.+.++.+.|||. +.|+++..|. ++|- |||.+++|..+|++..|+.++....|++||...++.+
T Consensus 1031 ~e~~l~~i~~~vL~~---~~i~~~d~Ff-~lGg-dSl~a~~l~~~~~~~~g~~l~~~~lf~~~t~~~la~~ 1096 (3956)
T PRK12467 1031 LEKRLAAIWADVLKV---ERVGLTDNFF-ELGG-HSLLATQVISRVRQRLGIQVPLRTLFEHQTLAGFAQA 1096 (3956)
T ss_pred HHHHHHHHHHHHhCC---CCCCCCCCch-hccC-ccHHHHHHHHHHHHHhCCCcchHHhhccchHHHHHHH
Confidence 456677788889987 4799999999 9999 9999999999999999999999999999998776654
No 301
>KOG1748|consensus
Probab=86.94 E-value=0.41 Score=44.09 Aligned_cols=62 Identities=11% Similarity=0.118 Sum_probs=48.7
Q ss_pred CCchhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCcee
Q psy11396 22 INNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTIS 89 (829)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~ 89 (829)
+..+|+-.+..++|.++= - -+++++-++..|.+|||+ |||-.||+-=.|+.+.|..+|..-.
T Consensus 49 l~k~~v~~RVl~VVk~~d----k-i~~~k~~~~s~f~~DLGl-DSLD~VEiVMAlEEEFgiEIpd~dA 110 (131)
T KOG1748|consen 49 LAKKEVVDRVLDVVKKFD----K-IDPSKLTTDSDFFKDLGL-DSLDTVEIVMALEEEFGIEIPDEDA 110 (131)
T ss_pred hhHHHHHHHHHHHHHHhh----c-CCccccchhhHHHHhcCC-cccccchhhhhhHHHhCCccCcchh
Confidence 445566666666665542 2 256779999999999999 9999999999999999999998653
No 302
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=86.56 E-value=0.37 Score=39.29 Aligned_cols=45 Identities=13% Similarity=0.141 Sum_probs=39.6
Q ss_pred hhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcC
Q psy11396 34 NNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNS 81 (829)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g 81 (829)
.+++++..+|+- ++++++++...+ ++|+ ||+-.+.|..|+++..+
T Consensus 2 ~Lr~~~~~Ll~e-~~~~l~dqeNLi-~~GL-DSiR~M~L~~~wR~~G~ 46 (74)
T COG3433 2 ALREQIAELLGE-SVEELDDQENLI-DYGL-DSIRMMALLERWRKRGA 46 (74)
T ss_pred cHHHHHHHHHcC-ChhhcCchhhHH-Hhch-hHHHHHHHHHHHHHcCC
Confidence 456889999997 789999999999 9999 99999999999996544
No 303
>PRK12316 peptide synthase; Provisional
Probab=86.44 E-value=0.65 Score=69.13 Aligned_cols=66 Identities=5% Similarity=0.033 Sum_probs=57.7
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL 101 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~ 101 (829)
+.+.+....+.|||.+ .|+.+..|. ++|. |||+|++|.++|++..|+.++....|++||...++..
T Consensus 2517 ~e~~l~~iw~~vL~~~---~i~~~d~Ff-~lGg-dSl~a~~l~~~~~~~~g~~l~~~~~f~~~ti~~la~~ 2582 (5163)
T PRK12316 2517 LEQRLAAIWQAVLKVE---QVGLDDHFF-ELGG-HSLLATQVVSRVRQDLGLEVPLRILFERPTLAAFAAS 2582 (5163)
T ss_pred HHHHHHHHHHHHhCCC---ccCCCCchh-hhcc-hHHHHHHHHHHHHHHhCCCcCHHHHhhCccHHHHhhh
Confidence 3455667778899983 699999999 9999 9999999999999999999999999999998776543
No 304
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=86.35 E-value=1.4 Score=45.84 Aligned_cols=92 Identities=14% Similarity=0.115 Sum_probs=65.6
Q ss_pred CCCCEEEEecccccchh-hhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCccCHHHHH
Q psy11396 649 CKIPVIAAMQGHAIGAG-WAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASEFKGKELK 727 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG-~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~~~a~eA~ 727 (829)
-..|.|..+..+..||= ..+++.-|+.|+-+.|.++|...++= -+++...++. | -=+++-.+
T Consensus 194 a~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGpRVI-------EQTire~LPe---------g-fQ~aEfLl 256 (294)
T COG0777 194 AGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALIGFAGPRVI-------EQTIREKLPE---------G-FQTAEFLL 256 (294)
T ss_pred cCCceEEEecCCCccchhHhHHhccCeeecCcccccccCcchhh-------hhhhcccCCc---------c-hhhHHHHH
Confidence 57899999999999884 57999999999887777776544320 0111111111 1 12467788
Q ss_pred HcCCcccccChhhHHHHHHHHHHHHhcCCH
Q psy11396 728 ERGISMPVLPRKQVLFYSLKLAKKLSLLSK 757 (829)
Q Consensus 728 ~~GLv~~v~~~~~l~~~~~~~a~~i~~~~~ 757 (829)
++|+||.||++.++......+...+...++
T Consensus 257 ehG~iD~iv~R~elr~tla~ll~~~~~~~~ 286 (294)
T COG0777 257 EHGMIDMIVHRDELRTTLASLLAKLTPQPA 286 (294)
T ss_pred HcCCceeeecHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999888888777765444
No 305
>PRK12467 peptide synthase; Provisional
Probab=85.39 E-value=0.46 Score=69.13 Aligned_cols=67 Identities=7% Similarity=-0.004 Sum_probs=59.9
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS 102 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~ 102 (829)
+.+.+..+.+.|||.+ .|+.+..|. |+|. |||++++|..+|++.+|+.++....|++||...++...
T Consensus 3606 ~e~~l~~i~~~vL~~~---~i~~~d~Ff-~lGg-dSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~ 3672 (3956)
T PRK12467 3606 VEQQLAAIWADVLGVE---QVGVTDNFF-ELGG-DSLLALQVLSRIRQSLGLKLSLRDLMSAPTIAELAGYS 3672 (3956)
T ss_pred HHHHHHHHHHHHhCCC---CCCCCcchh-cccc-hHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHH
Confidence 4566778888999974 699999999 9999 99999999999999999999999999999998887653
No 306
>PRK05691 peptide synthase; Validated
Probab=84.37 E-value=0.77 Score=67.53 Aligned_cols=66 Identities=6% Similarity=0.002 Sum_probs=58.4
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL 101 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~ 101 (829)
+.+.+.++.+.|||.+ .|+.+..|. ++|= |||.|++|.++|++..|+.++....|++||...++.+
T Consensus 1639 ~e~~l~~iw~~vL~~~---~i~~~d~Ff-~lGG-dSl~a~~l~~~~~~~~~~~l~~~~~f~~~tl~~la~~ 1704 (4334)
T PRK05691 1639 LQQQIAAIWREVLGLP---RVGLRDDFF-ALGG-HSLLATQIVSRTRQACDVELPLRALFEASELGAFAEQ 1704 (4334)
T ss_pred HHHHHHHHHHHHhCCC---CCCCCCchH-Hhcc-cHHHHHHHHHHHHHHhCCCcchhhhhcCCcHHHHHHH
Confidence 4556777889999974 699999999 9999 9999999999999999999999999999998766554
No 307
>PRK05087 D-alanine--poly(phosphoribitol) ligase subunit 2; Validated
Probab=83.78 E-value=1.2 Score=37.76 Aligned_cols=56 Identities=7% Similarity=0.011 Sum_probs=42.6
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCce
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTI 88 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~ 88 (829)
+++-|++.+..+.+.+. ..+.++..+. +.|+-||+.++||--.|+..+|+++|+.-
T Consensus 3 i~~~I~~iL~~~~~~~~-~~~~~d~~l~-~~g~lDSl~~veli~~lE~~fgi~i~~~e 58 (78)
T PRK05087 3 FKEQVLDILEELTGEDI-VSENMDEDLF-EEGILDSMGTVELLVELENRFDIEVPVSE 58 (78)
T ss_pred HHHHHHHHHHHHhCCCh-hccCCccchh-hccCcchHHHHHHHHHHHHHhCCccChHh
Confidence 44556666666666543 3577888888 66644999999999999999999998864
No 308
>PRK05691 peptide synthase; Validated
Probab=81.32 E-value=0.85 Score=67.09 Aligned_cols=68 Identities=9% Similarity=0.076 Sum_probs=60.2
Q ss_pred HHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396 30 SIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS 102 (829)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~ 102 (829)
.+++.+.++-+.|||. +.|+.+..|. ++|- |||+|++|..++++..|+.++..-.|++||...++.+.
T Consensus 4241 ~~e~~l~~iw~~vL~~---~~i~~~d~Ff-~lGg-~Sl~a~~l~~~~~~~~~~~~~~~~~f~~~t~~~la~~~ 4308 (4334)
T PRK05691 4241 ELEQTLATIWADVLKV---ERVGVHDNFF-ELGG-HSLLATQIASRVQKALQRNVPLRAMFECSTVEELAEYI 4308 (4334)
T ss_pred HHHHHHHHHHHHHhCC---CcCCCCCchh-hcCC-cHHHHHHHHHHHHHHhCCCccHHHHhcCCCHHHHHHHH
Confidence 3556677788889997 4799999999 9999 99999999999999999999999999999998877654
No 309
>TIGR01688 dltC D-alanine--poly(phosphoribitol) ligase, subunit 2. This protein is part of the teichoic acid operon in gram-positive organisms. Gram positive organisms incorporate teichoic acid in their cell walls, and in the fatty acid residues of the glycolipid component of the outer layer of the cytoplasmic membrane. This gene, dltC, encodes the alanyl carrier protein.
Probab=80.67 E-value=1 Score=37.56 Aligned_cols=53 Identities=9% Similarity=-0.007 Sum_probs=41.1
Q ss_pred hhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCcee
Q psy11396 35 NSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTIS 89 (829)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~ 89 (829)
++++...+.|.+.. ...++..+. +.|+-||+..|+|--.|+..+|+.+|++..
T Consensus 4 i~eIL~~i~~~~~~-~~~~d~~L~-~~GllDS~~~v~Li~~lE~ef~I~i~~~el 56 (73)
T TIGR01688 4 VLDILAEVTGSDDV-KENPDLELF-EEGLLDSFGTVQLLLEIQNQFDIDVPISEF 56 (73)
T ss_pred HHHHHHHHhcCccc-ccCccHHHH-HccchhHHHHHHHHHHHHHHhCCccCHHHc
Confidence 34445555555433 357788888 999889999999999999999999998753
No 310
>PRK12316 peptide synthase; Provisional
Probab=80.65 E-value=0.88 Score=67.77 Aligned_cols=67 Identities=6% Similarity=0.010 Sum_probs=59.2
Q ss_pred HHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceeccccccccccccc
Q psy11396 31 IKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLS 102 (829)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~~ 102 (829)
+.+.+.+..+.||+. +.|+++..|. ++|- |||.|++|.++|++..|+.++...+|.+||...++.+.
T Consensus 5073 ~e~~l~~i~~~vL~~---~~i~~~~~Ff-~lGg-dSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~ 5139 (5163)
T PRK12316 5073 LEQQVAAIWAEVLQL---ERVGLDDNFF-ELGG-HSLLAIQVTSRIQLELGLELPLRELFQTPTLAAFVELA 5139 (5163)
T ss_pred HHHHHHHHHHHHhCC---CCCCCCCChh-hccc-hHHHHHHHHHHHHHHcCCCCCHHHHHcCCCHHHHHHHH
Confidence 455666777888986 4699999999 9999 99999999999999999999999999999998887654
No 311
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=79.74 E-value=6 Score=44.56 Aligned_cols=97 Identities=11% Similarity=0.125 Sum_probs=60.1
Q ss_pred EEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-hHHHHHHHHHhcccCCCCCcccc
Q psy11396 372 IIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD-PIEFEALCESFNKFSYHKNFCAL 450 (829)
Q Consensus 372 ~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD-~~E~~Al~~~~~~~~~~~~~~~v 450 (829)
.|.|++...-+++.. ....+-..+++++||+++|++++|||.+.+. +.+..++ ......+...++-.. ..++
T Consensus 4 ~IvG~g~t~~~~~~~--~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~----~~~~ 76 (385)
T PRK12578 4 AVIGVGNSKFGRRDD--VSVQELAWESIKEALNDAGVSQTDIELVVVG-STAYRGIELYPAPIVAEYSGLTG----KVPL 76 (385)
T ss_pred EEEeecccceeecCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccccccCChHHHHHHHhCCCC----CCee
Confidence 477887765554422 2234566789999999999999999998763 3332211 222333444444210 0111
Q ss_pred CCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 451 GSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 451 ~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
. + +..+++|+..+..+...++.|..
T Consensus 77 -~----v-~~~casg~~al~~A~~~I~sG~~ 101 (385)
T PRK12578 77 -R----V-EAMCATGLAASLTAYTAVASGLV 101 (385)
T ss_pred -E----E-eccCHHHHHHHHHHHHHHHCCCC
Confidence 1 1 45688899999999999988753
No 312
>PLN02932 3-ketoacyl-CoA synthase
Probab=79.39 E-value=7.9 Score=44.63 Aligned_cols=76 Identities=22% Similarity=0.240 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHH
Q psy11396 395 QIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIIL 474 (829)
Q Consensus 395 ~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l 474 (829)
..+|+++||+++|++|+|||++... |.|..--|.-+.-+.+.+|-. -....-+++....++|+.++-.+-.
T Consensus 152 a~~Aa~~aL~~agi~p~dId~lIv~-tst~~~~Pslaa~V~~~lGlr--------~~i~~fdL~gmGCSggl~aL~lA~~ 222 (478)
T PLN02932 152 IIGAVDNLFRNTGISPSDIGILVVN-SSTFNPTPSLSSILVNKFKLR--------DNIKSLNLGGMGCSAGVIAIDAAKS 222 (478)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-ccCCCCCCcHHHHHHHHhCCC--------CCceEEEeccchhhhHHHHHHHHHH
Confidence 4678999999999999999998754 445444455555566666521 0111234566777777888777777
Q ss_pred HHhcC
Q psy11396 475 SLKHK 479 (829)
Q Consensus 475 ~L~~~ 479 (829)
.|+.+
T Consensus 223 ll~~~ 227 (478)
T PLN02932 223 LLQVH 227 (478)
T ss_pred HHHcC
Confidence 77664
No 313
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=79.21 E-value=6.7 Score=43.97 Aligned_cols=63 Identities=8% Similarity=0.043 Sum_probs=55.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhcC--ChHHHHHHHHHHh
Q psy11396 743 FYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFVN--NPSVITNIERYFD 805 (829)
Q Consensus 743 ~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~--~~~~~e~~~~~~~ 805 (829)
+-+.+..+.|.+.+|.++..+.+++++....++.+.+++|......+... ++||.|++++.+-
T Consensus 264 ~wa~~~~~~l~~~sP~sl~vt~~~~~~~~~~sl~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~Li 328 (381)
T PLN02988 264 GWISATIQALKKASPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAILV 328 (381)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHhc
Confidence 45667777888999999999999999988889999999999999999842 6899999999874
No 314
>PRK06158 thiolase; Provisional
Probab=78.47 E-value=7.7 Score=43.68 Aligned_cols=94 Identities=10% Similarity=0.028 Sum_probs=58.8
Q ss_pred EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcccc
Q psy11396 371 CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL 450 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v 450 (829)
+.|.|++....+++.. ....+-..+++++||++||++++|||.+.+... .. ......+.+.+|- ...++
T Consensus 10 vaIvG~g~t~~~~~~~--~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~---~~~~~~la~~lGl-----~~~~~ 78 (384)
T PRK06158 10 TAIVGAATAGLGEAPG--LSAMELLAQAAHRALADAGLTMADVDGLFTASP-DD---ALWGLSVAEYLGI-----RPRFV 78 (384)
T ss_pred EEEEEeeeccceeCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CC---CCcHHHHHHHcCC-----CCeee
Confidence 4588888765554321 223466688999999999999999999876422 11 1112234444442 11111
Q ss_pred CCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 451 GSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 451 ~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
..-+..+++|+..+..+...++.|.
T Consensus 79 -----~~~~~g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 79 -----DGTMIGGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred -----ccccCccHHHHHHHHHHHHHHHcCC
Confidence 1124567888888888998888874
No 315
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=78.39 E-value=8.2 Score=43.53 Aligned_cols=63 Identities=10% Similarity=0.114 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHhhhc--CChHHHHHHHHHHh
Q psy11396 743 FYSLKLAKKLSLLSKKELELQKKYYSHSLQKKLSTIFLHELTMHDYTFV--NNPSVITNIERYFD 805 (829)
Q Consensus 743 ~~~~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~~~~~e~~~~~~~ 805 (829)
+.+.+-.+.|.+.+|.++..+-+++++....++++.+++|+.....++. .++|+.|++++.+-
T Consensus 292 ~wa~~~~~~l~~~sP~Sl~vt~~~~~~~~~~~l~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~Li 356 (401)
T PLN02157 292 TWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARLI 356 (401)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHc
Confidence 4566777788899999999999999998888999999999999988884 26899999999875
No 316
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=78.00 E-value=7 Score=44.22 Aligned_cols=98 Identities=15% Similarity=0.113 Sum_probs=58.9
Q ss_pred EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC-CCChHHHHHHHHHhcccCCCCCccc
Q psy11396 371 CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK-LGDPIEFEALCESFNKFSYHKNFCA 449 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~-~gD~~E~~Al~~~~~~~~~~~~~~~ 449 (829)
+.|.|++...-++.. ..+..+-..+++++||+++||+++|||.+.+ |+... .+.......+.+.+|- ...+
T Consensus 9 v~IvG~g~tp~~~~~--~~~~~~L~~ea~~~AL~dagl~~~dID~v~v-g~~~~~~~~~~~~~~~a~~lGl-----~~~~ 80 (398)
T PRK06157 9 VAILGMGCTKFGERW--DAGAEDLMVEAFLEALADAGIEPKDIDAAWF-GTHYDEIGSGKSGTPLSRALRL-----PNIP 80 (398)
T ss_pred eEEEEeccccccccC--CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccccccccchhHHHHHHcCC-----CCCC
Confidence 457777765544431 1223556688999999999999999998765 22111 0111111234444431 0011
Q ss_pred cCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 450 LGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 450 v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
...=+..+++|+..+..++.+++.|..
T Consensus 81 -----~~~v~~~c~sg~~ai~~A~~~I~sG~~ 107 (398)
T PRK06157 81 -----VTRVENFCATGSEAFRGAVYAVASGAY 107 (398)
T ss_pred -----EEEEecccHHHHHHHHHHHHHHHCCCC
Confidence 111256689999999999999998743
No 317
>PRK06059 lipid-transfer protein; Provisional
Probab=77.76 E-value=11 Score=42.79 Aligned_cols=96 Identities=13% Similarity=0.086 Sum_probs=59.2
Q ss_pred EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC--CCChHHHHHHHHHhcccCCCCCcc
Q psy11396 371 CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK--LGDPIEFEALCESFNKFSYHKNFC 448 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~--~gD~~E~~Al~~~~~~~~~~~~~~ 448 (829)
+.|.|.+...-+++. ....+...+++++||+++|++++|||.|... +... .........+...++- ..+
T Consensus 6 v~Ivg~~~t~~~r~~---~~~~~La~~A~~~Al~dAgl~~~dId~vi~~-~~~~~~~~~~~~a~~va~~lG~-----~~~ 76 (399)
T PRK06059 6 VYILGAGMHPWGKWG---RDFVEYGVVAARAALADAGLDWRDVQLVVGA-DTIRNGYPGFVAGATFAQALGW-----NGA 76 (399)
T ss_pred EEEEEecccccCCCC---CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCccCCccHHHHHHHHhCC-----CCC
Confidence 457787776555431 2225666789999999999999999998743 2211 1122223334444442 111
Q ss_pred ccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 449 ALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 449 ~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
+.. .=+..+++|+..+..+...++.|.
T Consensus 77 ~~~-----~v~~~Casg~~al~~A~~~I~sG~ 103 (399)
T PRK06059 77 PVS-----SSYAACASGSQALQSARAQILAGL 103 (399)
T ss_pred cee-----cccchhHHHHHHHHHHHHHHHCCC
Confidence 221 125677888888999999998874
No 318
>PRK05790 putative acyltransferase; Provisional
Probab=77.70 E-value=9.5 Score=43.08 Aligned_cols=101 Identities=8% Similarity=0.036 Sum_probs=57.8
Q ss_pred EEEEEeeeecCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-ChHHHHHHHHHhcccCCCCCc
Q psy11396 371 CIIKGWGVNQDGKTNGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLG-DPIEFEALCESFNKFSYHKNF 447 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~g-D~~E~~Al~~~~~~~~~~~~~ 447 (829)
+.|.|.+...-++..+. .....+-..+++++||+++|++++|||.+.. |+.++.+ .......+....+
T Consensus 4 v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~-g~~~~~~~~~~~~~~~~~~~g-------- 74 (393)
T PRK05790 4 VVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIM-GQVLQAGAGQNPARQAALKAG-------- 74 (393)
T ss_pred eEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEE-EEecCCCCCCcHHHHHHHHcC--------
Confidence 35777776655543221 1233556688999999999999999998864 2222111 1112222221112
Q ss_pred cccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
++.+... ..=+..+++|+..+..+..+++.|..
T Consensus 75 l~~~~~~-~~v~~~Casg~~al~~A~~~I~sG~~ 107 (393)
T PRK05790 75 LPVEVPA-LTINKVCGSGLKAVALAAQAIRAGDA 107 (393)
T ss_pred CCCCCce-eeecccchHHHHHHHHHHHHHHcCCC
Confidence 1111111 11134688899999999999988754
No 319
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=77.42 E-value=8.6 Score=43.38 Aligned_cols=98 Identities=11% Similarity=0.065 Sum_probs=58.6
Q ss_pred EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-ChHHHHHHHHHhcccCCCCCccc
Q psy11396 371 CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLG-DPIEFEALCESFNKFSYHKNFCA 449 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~g-D~~E~~Al~~~~~~~~~~~~~~~ 449 (829)
+.|.|++...-+++.. ....+...+|+++||+++|++++|||.+.+..+..... -..-...+...++... .+
T Consensus 11 vaIvG~g~t~~~~~~~--~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~-----~~ 83 (392)
T PRK06065 11 VAVIGAGLTLFRRRLL--ETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIR-----KP 83 (392)
T ss_pred eEEEEecccCCcCCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCC-----CC
Confidence 3588888776555422 22255668899999999999999999987642211111 1111112333332110 11
Q ss_pred cCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 450 LGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 450 v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
.. .+ +..+++|...+..+..+++.|.
T Consensus 84 ~~----~V-~~~gasG~~al~~A~~~I~sG~ 109 (392)
T PRK06065 84 VS----RV-YVGGATGVMTAIAGWYHVASGL 109 (392)
T ss_pred eE----EE-ecCchhHHHHHHHHHHHHhCCC
Confidence 11 11 3458899999999999999874
No 320
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=77.25 E-value=10 Score=43.27 Aligned_cols=101 Identities=9% Similarity=-0.016 Sum_probs=59.5
Q ss_pred EEEEEeeeecCCCCCCCC--CCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-hHHHHHHHHHhcccCCCCCc
Q psy11396 371 CIIKGWGVNQDGKTNGIT--APNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD-PIEFEALCESFNKFSYHKNF 447 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~--~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD-~~E~~Al~~~~~~~~~~~~~ 447 (829)
+.|.|.+...-+++.+.. ....+-..+++++||+++|++++|||.|... +.++.++ ......+...++-. ..
T Consensus 5 v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~----~~ 79 (426)
T PRK08170 5 VYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILG-CAMPSPDEANIARVVALRLGCG----EK 79 (426)
T ss_pred EEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcChHHHHHHHHhCcC----CC
Confidence 357777766555533221 2335566889999999999999999987653 3322223 12222233333310 01
Q ss_pred cccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
.|...+ +..++||+..+..+..+++.|..
T Consensus 80 ~p~~~v-----~~~CaSg~~al~~A~~~I~sG~~ 108 (426)
T PRK08170 80 VPAWTV-----QRNCASGMQALDSAAANIALGRA 108 (426)
T ss_pred ceeeec-----cchhhHHHHHHHHHHHHHHCCCC
Confidence 121111 23389999999999999988753
No 321
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=76.22 E-value=12 Score=42.44 Aligned_cols=101 Identities=12% Similarity=0.056 Sum_probs=58.1
Q ss_pred EEEEEeeeecCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEe-cCCCCCCCChHHHHHHHHHhcccCCCCCc
Q psy11396 371 CIIKGWGVNQDGKTNGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEA-HGTGTKLGDPIEFEALCESFNKFSYHKNF 447 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~-hgtgt~~gD~~E~~Al~~~~~~~~~~~~~ 447 (829)
+.|.|++...-++..+. ..+..+-..+++++||+++|++++|||.+.+ +......+ ..-...+...++- . ..
T Consensus 3 v~IvG~~~Tp~g~~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~-~~~~~~~~~~~Gl-~---~~ 77 (394)
T PLN02644 3 VCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLG-QAPARQAALGAGL-P---PS 77 (394)
T ss_pred EEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcC-CcHHHHHHHhcCC-C---CC
Confidence 34677776555543221 1223555688999999999999999999875 21111111 1111222222221 0 01
Q ss_pred cccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
+|... + +..++||+..+..+..+++.|..
T Consensus 78 ~p~~~----v-~~~caSg~~av~~Aa~~I~sG~~ 106 (394)
T PLN02644 78 TICTT----V-NKVCASGMKAVMLAAQSIQLGIN 106 (394)
T ss_pred CceEE----E-eccchHHHHHHHHHHHHHHcCCC
Confidence 12211 1 34689999999999999988754
No 322
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=76.15 E-value=16 Score=39.04 Aligned_cols=76 Identities=16% Similarity=0.140 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHH
Q psy11396 394 SQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKII 473 (829)
Q Consensus 394 ~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~ 473 (829)
....++.++|+++|++|+|||++.++ |.+-.--|.=..-+..-|+-.. ....-+++=...++|+..+-.+-
T Consensus 86 v~f~av~~LL~ktgv~p~dIdiLVvn-cs~f~ptPSLsamIvnr~~mr~--------di~~~nLsGMGCsAgliai~lA~ 156 (290)
T PF08392_consen 86 VIFGAVDDLLAKTGVKPSDIDILVVN-CSLFNPTPSLSAMIVNRYGMRS--------DIKSYNLSGMGCSAGLIAIDLAK 156 (290)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEE-CcCCCcCCcHHHHHHHHhCCCc--------CeeeecccCCcchhhHHHHHHHH
Confidence 34678999999999999999998766 3332233444455555665211 11122455556677776655554
Q ss_pred HHHhc
Q psy11396 474 LSLKH 478 (829)
Q Consensus 474 l~L~~ 478 (829)
..|+.
T Consensus 157 ~lL~~ 161 (290)
T PF08392_consen 157 DLLQA 161 (290)
T ss_pred HHHHh
Confidence 44443
No 323
>PLN02192 3-ketoacyl-CoA synthase
Probab=75.80 E-value=8.5 Score=44.65 Aligned_cols=76 Identities=16% Similarity=0.153 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHH
Q psy11396 395 QIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIIL 474 (829)
Q Consensus 395 ~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l 474 (829)
...|+++||+++|++|+|||++.+. |.+-.--|.-+..+.+.++-. . ....-+++....++|+.++-.+-.
T Consensus 180 ~~~Aa~~aL~kaGi~p~DIDiLIv~-~S~~~~~PSlaa~I~n~lGlr-~-------~i~afdLsgmGCSggl~aLdlA~~ 250 (511)
T PLN02192 180 MFGAIDQLLAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR-G-------NILSYNLGGMGCSAGLISIDLAKH 250 (511)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCchHHHHHHHHhCCC-C-------CceEEEcccchhhhHHHHHHHHHH
Confidence 4678999999999999999999877 433333455566666666521 0 111224566677777777777766
Q ss_pred HHhcC
Q psy11396 475 SLKHK 479 (829)
Q Consensus 475 ~L~~~ 479 (829)
.|+.+
T Consensus 251 lL~a~ 255 (511)
T PLN02192 251 LLQVH 255 (511)
T ss_pred HHHcC
Confidence 66653
No 324
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=75.59 E-value=14 Score=41.92 Aligned_cols=100 Identities=12% Similarity=0.109 Sum_probs=58.3
Q ss_pred EEEEEeeeecCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-hHHHHHHHHHhcccCCCCCc
Q psy11396 371 CIIKGWGVNQDGKTNGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD-PIEFEALCESFNKFSYHKNF 447 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD-~~E~~Al~~~~~~~~~~~~~ 447 (829)
+.|.|.+...-++..+. .....+-..+++++||+++|++++|||.|... +.+..+. +.-...+....|- . ..
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g-~~~~~~~~~~~a~~va~~~Gl-~---~~ 78 (404)
T PRK06205 4 AVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFG-QGYPNGEAPAIGRVAALDAGL-P---VT 78 (404)
T ss_pred eEEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCCChHHHHHHHHcCC-C---CC
Confidence 35667776665553321 12235566889999999999999999988643 2222111 1111122222221 0 01
Q ss_pred cccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
+|...+ ...++||+..+..+...++.|.
T Consensus 79 ~p~~~V-----~~~CaSg~~Al~~A~~~I~sG~ 106 (404)
T PRK06205 79 VPGMQL-----DRRCGSGLQAVITAAMQVQTGA 106 (404)
T ss_pred Cceeeh-----hhhhhHHHHHHHHHHHHHHcCC
Confidence 111111 4568899999999999998875
No 325
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=75.57 E-value=12 Score=42.27 Aligned_cols=94 Identities=6% Similarity=-0.002 Sum_probs=59.0
Q ss_pred EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcccc
Q psy11396 371 CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL 450 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v 450 (829)
+.|.|++...-+++... ...+-..+++++||++|||+++|||.+...+ .. .+. ....+...++- ...++
T Consensus 7 vaIvG~g~t~~~~~~~~--~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~-~~-~~~--~~~~~~~~lGl-----~~~~~ 75 (388)
T PRK08142 7 AYIVGAYEHPTRKAPDK--SVAQLHAEVAKGALADAGLSLADVDGYFCAG-DA-PGL--GPASMVDYLGL-----KLRHV 75 (388)
T ss_pred EEEEEEeeccceeCCCC--CHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC-CC-CCc--cHHHHHHhCCC-----CCeee
Confidence 34888887766654321 1245668899999999999999999876521 11 111 11124444442 11111
Q ss_pred CCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 451 GSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 451 ~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
. -.+..|++|...+..+..+++.|.
T Consensus 76 ~-----~v~~gg~s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 76 D-----STETGGSSYLAHVGHAAQAIAAGK 100 (388)
T ss_pred c-----cccCCcHHHHHHHHHHHHHHHcCC
Confidence 1 135678889888999999999884
No 326
>PRK09051 beta-ketothiolase; Provisional
Probab=75.25 E-value=13 Score=42.01 Aligned_cols=101 Identities=8% Similarity=0.003 Sum_probs=58.8
Q ss_pred EEEEEeeeecCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEec-CCCCCCCChHHHHHHHHHhcccCCCCCc
Q psy11396 371 CIIKGWGVNQDGKTNGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH-GTGTKLGDPIEFEALCESFNKFSYHKNF 447 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h-gtgt~~gD~~E~~Al~~~~~~~~~~~~~ 447 (829)
+.|.|.+...-+...+. .....+-..+++++||+++|++|+|||.|.+. .+.....+......+....+- . ..
T Consensus 5 v~Ivg~~rtp~g~~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl-~---~~ 80 (394)
T PRK09051 5 VVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGV-P---QE 80 (394)
T ss_pred EEEEecccCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCC-C---CC
Confidence 35667666554442221 11225566889999999999999999987653 222211223333333322221 0 01
Q ss_pred cccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
.|.-.+ +..+++|+..+..+...++.|.
T Consensus 81 ~p~~~V-----~~aCaSg~~Al~~A~~~I~sG~ 108 (394)
T PRK09051 81 TPAFNV-----NRLCGSGLQAIVSAAQAILLGD 108 (394)
T ss_pred CceEEe-----cccchHHHHHHHHHHHHHHcCC
Confidence 122111 4568899999999999998875
No 327
>PRK08256 lipid-transfer protein; Provisional
Probab=74.93 E-value=10 Score=42.88 Aligned_cols=96 Identities=8% Similarity=-0.019 Sum_probs=56.3
Q ss_pred EEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec-CCCCCCCChHHHHHHHHHhcccCCCCCcccc
Q psy11396 372 IIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH-GTGTKLGDPIEFEALCESFNKFSYHKNFCAL 450 (829)
Q Consensus 372 ~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h-gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v 450 (829)
.|.|.+...-++. .......+-...++++||+++|++++|||.+.+. ..+. ......+...++-. .++
T Consensus 4 ~IvG~~~t~~~~~-~~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~----~~~~~~~~~~lGl~-----~~~- 72 (391)
T PRK08256 4 FVAGVGMTPFEKP-GASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGD----STSGQRALYEVGMT-----GIP- 72 (391)
T ss_pred EEEeccccccccC-CCCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCC----cchhHHHHHHcCCC-----CCC-
Confidence 4777776544432 1112234556789999999999999999976541 1121 11111122222210 011
Q ss_pred CCcccCcCcchhhhhHHHHHHHHHHHhcCCCC
Q psy11396 451 GSVKSNIGHSATAAGVIGMIKIILSLKHKVLP 482 (829)
Q Consensus 451 ~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ip 482 (829)
...=+..+++|+..+..+..+++.|..-
T Consensus 73 ----~~~v~~~caSg~~ai~~A~~~I~sG~~d 100 (391)
T PRK08256 73 ----IVNVNNNCSTGSTALFLARQAVRSGAAD 100 (391)
T ss_pred ----CcccccccHHHHHHHHHHHHHHHCCCCC
Confidence 1122567889999999999999998653
No 328
>PLN00415 3-ketoacyl-CoA synthase
Probab=74.05 E-value=12 Score=42.89 Aligned_cols=77 Identities=14% Similarity=0.142 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHH
Q psy11396 393 KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKI 472 (829)
Q Consensus 393 ~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~ 472 (829)
.....|.+++|+++|++|+|||++.++.|+.. --|.-...+...++-. . ....-.++....++|+.++-.+
T Consensus 136 m~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~-~~Pslaa~l~~~LGLr-~-------~v~~~dL~gmGCsggv~aL~lA 206 (466)
T PLN00415 136 LVIFGALNSLFKKTGIEPREVGIFIVNCSLFN-PNPSLSSMIVNRYKLK-T-------DVKTYNLSGMGCSAGAISVDLA 206 (466)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECcCCC-CCchHHHHHHHHhCCC-C-------CceEEEeccccchHHHHHHHHH
Confidence 34566888999999999999999877655431 2355555566666521 1 1112234555666677777666
Q ss_pred HHHHhc
Q psy11396 473 ILSLKH 478 (829)
Q Consensus 473 ~l~L~~ 478 (829)
-..++.
T Consensus 207 ~~ll~a 212 (466)
T PLN00415 207 TNLLKA 212 (466)
T ss_pred HHHHHh
Confidence 666655
No 329
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=73.37 E-value=1.9 Score=49.53 Aligned_cols=31 Identities=26% Similarity=0.474 Sum_probs=29.8
Q ss_pred CCEEEEecccccchhhhhhhccccccccccc
Q psy11396 651 IPVIAAMQGHAIGAGWAMGLFCDYTIFSEES 681 (829)
Q Consensus 651 kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a 681 (829)
.|+|++|-|+|.|||+.+-..||++|+.++.
T Consensus 164 IPqIsvv~G~c~gGgaY~pal~D~~imv~~~ 194 (526)
T COG4799 164 IPQISVVMGPCAGGGAYSPALTDFVIMVRDQ 194 (526)
T ss_pred CCEEEEEEecCcccccccccccceEEEEcCC
Confidence 8999999999999999999999999999985
No 330
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=72.85 E-value=14 Score=42.22 Aligned_cols=98 Identities=9% Similarity=-0.094 Sum_probs=58.3
Q ss_pred EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCh--HHHHHHHHHhcccCCCCCcc
Q psy11396 371 CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDP--IEFEALCESFNKFSYHKNFC 448 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~--~E~~Al~~~~~~~~~~~~~~ 448 (829)
+.|.|++...-+++.. ..+..+-..+++++||+++|++++|||.+.+. +.....+. .-...+....|-
T Consensus 18 VaIvG~g~Tpfgr~~~-~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~-~~~~~~~g~~~~~~~~~~~lGl-------- 87 (430)
T PRK06365 18 VYMVAAGVTKFDKASP-YMDFRERVKKAFDYAMNDAGLTLADIDGSVAS-YFSDHFQRQLLAGIMVQDYLGL-------- 87 (430)
T ss_pred EEEEEeeecCccccCC-CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEe-cccccccccchhhHHHHHhcCC--------
Confidence 4578887766554311 11123556789999999999999999997653 32211111 111112222221
Q ss_pred ccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 449 ALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 449 ~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
.......-+..++||...+..++..++.|.
T Consensus 88 --~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~ 117 (430)
T PRK06365 88 --VPKPSKRIEGGGATGGLAFQAGYEEIASGR 117 (430)
T ss_pred --CCCceEEEeCCcHHHHHHHHHHHHHHHcCC
Confidence 111111224568999999999999999884
No 331
>PLN02377 3-ketoacyl-CoA synthase
Probab=72.72 E-value=15 Score=42.61 Aligned_cols=76 Identities=18% Similarity=0.212 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHH
Q psy11396 395 QIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIIL 474 (829)
Q Consensus 395 ~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l 474 (829)
...|+++||+++|++|+|||++.++-|+. .--|.-+..+.+.+|-.. . + ..-+++....++|+.++-.+-.
T Consensus 176 ~~~A~~~aL~kaGi~p~dID~LVv~cS~~-~~~PSlaa~V~~~LGlr~-~-----v--~afdL~gmGCsggl~aL~lA~~ 246 (502)
T PLN02377 176 MFGALDNLFANTNVNPKDIGILVVNCSLF-NPTPSLSAMIVNKYKLRG-N-----I--RSFNLGGMGCSAGVIAVDLAKD 246 (502)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCC-CCCCcHHHHHHHHhCCCC-C-----C--eEEecccchhhHHHHHHHHHHH
Confidence 46789999999999999999998743332 123555555666665210 0 1 1224555666777777776666
Q ss_pred HHhcC
Q psy11396 475 SLKHK 479 (829)
Q Consensus 475 ~L~~~ 479 (829)
.|+.+
T Consensus 247 ll~~~ 251 (502)
T PLN02377 247 MLQVH 251 (502)
T ss_pred HHHcC
Confidence 66654
No 332
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=70.64 E-value=20 Score=40.44 Aligned_cols=98 Identities=8% Similarity=0.064 Sum_probs=55.3
Q ss_pred EEEeeeecCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-hHHHHHHHHHhcccCCCCCccc
Q psy11396 373 IKGWGVNQDGKTNGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD-PIEFEALCESFNKFSYHKNFCA 449 (829)
Q Consensus 373 I~g~~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD-~~E~~Al~~~~~~~~~~~~~~~ 449 (829)
|.|.+...-++..+. .....+-..+|+++||+++|++++|||.+.+ ++.+...+ +.-+..+...++-. ..++
T Consensus 2 Ivg~~~Tpf~r~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~-~~~~~~~~~~~~a~~v~~~lGl~----~~~~ 76 (386)
T cd00751 2 IVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIM-GNVLQAGEGQNPARQAALLAGLP----ESVP 76 (386)
T ss_pred EEEeecCCccCCCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEE-EeccCCCCCChHHHHHHHHcCCC----CCCc
Confidence 455555444433221 1223556678999999999999999999875 33222111 11122233333310 0011
Q ss_pred cCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 450 LGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 450 v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
.-. + +..+++|+..+..+...++.|.
T Consensus 77 ~~~----v-~~~c~s~~~al~~A~~~I~sG~ 102 (386)
T cd00751 77 ATT----V-NRVCGSGLQAVALAAQSIAAGE 102 (386)
T ss_pred hhh----h-ccccHHHHHHHHHHHHHHHCCC
Confidence 111 1 4567888888999999998875
No 333
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=70.19 E-value=19 Score=40.59 Aligned_cols=101 Identities=9% Similarity=-0.055 Sum_probs=58.3
Q ss_pred EEEEEeeeecCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEec-CCCCCCCChHHHHHHHHHhcccCCCCCc
Q psy11396 371 CIIKGWGVNQDGKTNGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH-GTGTKLGDPIEFEALCESFNKFSYHKNF 447 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h-gtgt~~gD~~E~~Al~~~~~~~~~~~~~ 447 (829)
+.|.|.+...-++..+. ..+..+-..+++++||+++|++++|||.+..- ......+-... ..+....+- ...
T Consensus 4 v~Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a-~~~~~~~Gl----~~~ 78 (388)
T PRK06366 4 VYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPA-GQAAYHAGL----PFG 78 (388)
T ss_pred EEEEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHH-HHHHHHCCC----CCC
Confidence 34677776655543221 12224556889999999999999999988642 11111111111 112222221 001
Q ss_pred cccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
+|...+ +..++||+..+..++.+++.|..
T Consensus 79 ~p~~~v-----~~~caSg~~av~~Aa~~I~sG~~ 107 (388)
T PRK06366 79 VTKYTV-----NVVCASGMLAVESAAREIMLGER 107 (388)
T ss_pred Ccceee-----echhhHHHHHHHHHHHHHhcCCC
Confidence 122222 25799999999999999998854
No 334
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=69.68 E-value=24 Score=36.71 Aligned_cols=78 Identities=9% Similarity=-0.002 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~ 471 (829)
.+...++++++|+++|++++|||.+....+.....-+.-+..+...++-. ..+ ...+ ....++|+..+..
T Consensus 8 ~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-----~~~----~~~i-~~~C~s~~~al~~ 77 (254)
T cd00327 8 SELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-----GGP----AYSV-NQACATGLTALAL 77 (254)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-----CCC----ccee-ccHhHHHHHHHHH
Confidence 34567899999999999999999988654322211233334456555521 011 1122 2456677777777
Q ss_pred HHHHHhcC
Q psy11396 472 IILSLKHK 479 (829)
Q Consensus 472 ~~l~L~~~ 479 (829)
+...|+.|
T Consensus 78 A~~~i~~g 85 (254)
T cd00327 78 AVQQVQNG 85 (254)
T ss_pred HHHHHHCC
Confidence 77777775
No 335
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=69.29 E-value=19 Score=40.76 Aligned_cols=101 Identities=7% Similarity=0.054 Sum_probs=59.1
Q ss_pred EEEEEeeeecCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-hHHHHHHHHHhcccCCCCCc
Q psy11396 371 CIIKGWGVNQDGKTNGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD-PIEFEALCESFNKFSYHKNF 447 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD-~~E~~Al~~~~~~~~~~~~~ 447 (829)
+.|.|.+...-+++.+. .....+-..+++++||+++|++|+|||.|.+. +.+..++ +.=..-+...+|- ...
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g-~~~~~~~~~~~a~~va~~lGl----~~~ 78 (393)
T PRK05656 4 VVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILG-QVLTAGAGQNPARQAAIKAGL----PHS 78 (393)
T ss_pred EEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-EecCCCCCCcHHHHHHHHcCC----CCC
Confidence 45777777666653221 12224556789999999999999999987753 2222111 1111112222221 000
Q ss_pred cccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
.|.-.+ +..+++|+..+..+...++.|..
T Consensus 79 ~p~~~V-----~~~Casg~~ai~~A~~~I~sG~~ 107 (393)
T PRK05656 79 VPAMTL-----NKVCGSGLKALHLAAQAIRCGDA 107 (393)
T ss_pred cceEEe-----cccchhHHHHHHHHHHHHHcCCC
Confidence 111111 45788999999999999988753
No 336
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=67.92 E-value=26 Score=39.43 Aligned_cols=98 Identities=9% Similarity=-0.011 Sum_probs=57.3
Q ss_pred EEEEeeeecCCCCCCCC--CCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC----ChHHHHHHHHHhcccCCCC
Q psy11396 372 IIKGWGVNQDGKTNGIT--APNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLG----DPIEFEALCESFNKFSYHK 445 (829)
Q Consensus 372 ~I~g~~~~~dg~~~~~~--~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~g----D~~E~~Al~~~~~~~~~~~ 445 (829)
.|.|.+...-+++.+.. .+..+-..+++++||+++|++++|||.+.+ |+....+ .......+ ..+..
T Consensus 5 ~Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~-g~~~~~~~~~~~~~~~~~l---~~gl~--- 77 (382)
T PRK07801 5 YIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIF-GCVDTIGPQAGNIARTSWL---AAGLP--- 77 (382)
T ss_pred EEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEE-EeeccCCcccccHHHHHHH---HcCCC---
Confidence 46777766555432211 223555688999999999999999998876 3221111 11221111 11100
Q ss_pred CccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 446 ~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
..++. ..=+..++||+..+..++.+++.|..
T Consensus 78 ~~~p~-----~~v~~acaSg~~Av~~Aa~~I~sG~~ 108 (382)
T PRK07801 78 EEVPG-----VTVDRQCGSSQQAIHFAAQAVMSGTQ 108 (382)
T ss_pred CCCce-----eeecchhhhHHHHHHHHHHHHHCCCC
Confidence 00111 11134689999999999999998854
No 337
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=67.76 E-value=18 Score=40.85 Aligned_cols=80 Identities=10% Similarity=0.048 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC--ChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLG--DPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGM 469 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~g--D~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~l 469 (829)
.+-..+++++||+++|++|+|||.|.. |+.+..+ ........ ....... ..+|. ..=+..++||+..+
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~vi~-g~~~~~~~~~~~~~~~~-~l~a~~~---~~~p~-----~~V~~~CaSg~~ai 102 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDDIIT-GCALQVGENWLYGGRHP-IFLARLP---YNIPA-----MAVDRQCASSLTTV 102 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeeEE-EeecCCCcccccHHHHH-HHHcCCC---CCCcc-----hhhhhhhHHHHHHH
Confidence 455678999999999999999998764 3333221 11222222 1222211 11121 12257789999999
Q ss_pred HHHHHHHhcCCC
Q psy11396 470 IKIILSLKHKVL 481 (829)
Q Consensus 470 i~~~l~L~~~~i 481 (829)
..+..+++.|..
T Consensus 103 ~~A~~~I~sG~~ 114 (394)
T PRK06445 103 SIGAMEIATGMA 114 (394)
T ss_pred HHHHHHHHcCCC
Confidence 999999998753
No 338
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=67.71 E-value=20 Score=40.74 Aligned_cols=100 Identities=12% Similarity=0.078 Sum_probs=57.2
Q ss_pred EEEEEeeeecCCCCCC--C-CCCCHHHHHHHHHHHHHHc-CCCCCCccEEEecCCCCCCCC--hHHHHHHHHHhcccCCC
Q psy11396 371 CIIKGWGVNQDGKTNG--I-TAPNTKSQIRLQTKIYKKF-NINPNDIQLLEAHGTGTKLGD--PIEFEALCESFNKFSYH 444 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~--~-~~p~~~~~~~ai~~Al~~A-gl~~~dId~ve~hgtgt~~gD--~~E~~Al~~~~~~~~~~ 444 (829)
+.|.|++...-++... + .....+-..+++++||+++ |++++|||.+.+ |+..+.+. ..-..-+....|-
T Consensus 4 v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~-g~~~~~~~~g~~~~~~~a~~lGl---- 78 (406)
T PRK07851 4 AVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLML-GCGLPGGEQGFNMARVVAVLLGY---- 78 (406)
T ss_pred EEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEE-EcccccccccCCHHHHHHHHcCC----
Confidence 3477776655443211 1 1122445678999999997 999999999865 33221111 1111112222221
Q ss_pred CCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 445 KNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 445 ~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
..+|. ..=+..++||...+..+...++.|..
T Consensus 79 -~~~p~-----~~v~~~caSG~~av~~Aa~~I~sG~~ 109 (406)
T PRK07851 79 -DFLPG-----TTVNRYCSSSLQTTRMAFHAIKAGEG 109 (406)
T ss_pred -CCCCe-----eeeeccchhHHHHHHHHHHHHHCCCC
Confidence 01111 12245689999999999999998853
No 339
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=67.18 E-value=14 Score=41.03 Aligned_cols=79 Identities=18% Similarity=0.117 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~ 471 (829)
.+...+|+++||+++|++|+|||++.. +|.|....|.-...+...++-.. .++ .-.+.+..+++|+..+..
T Consensus 86 ~~la~~Aa~~aL~~a~~~~~~Id~li~-~s~~~~~~P~~a~~i~~~lgl~~----~~~----~~dv~~~~C~~~~~al~~ 156 (361)
T cd00831 86 RELAEEAARGALDEAGLRPSDIDHLVV-NTSTGNPTPSLDAMLINRLGLRP----DVK----RYNLGGMGCSAGAIALDL 156 (361)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCCEEEE-ECCCCCCCCCHHHHHHHHhCCCc----ccc----hhccccccchhHHHHHHH
Confidence 345578999999999999999999875 34554445555555655555210 011 112333455666666666
Q ss_pred HHHHHhcC
Q psy11396 472 IILSLKHK 479 (829)
Q Consensus 472 ~~l~L~~~ 479 (829)
+...++.+
T Consensus 157 A~~~~~~~ 164 (361)
T cd00831 157 AKDLLEAN 164 (361)
T ss_pred HHHHHHHC
Confidence 66666654
No 340
>PRK07937 lipid-transfer protein; Provisional
Probab=66.59 E-value=21 Score=39.61 Aligned_cols=46 Identities=13% Similarity=0.255 Sum_probs=33.6
Q ss_pred EEEEEeeeecCCCCCCCCCCC-HHHHHHHHHHHHHHcCCCCCCccEEE
Q psy11396 371 CIIKGWGVNQDGKTNGITAPN-TKSQIRLQTKIYKKFNINPNDIQLLE 417 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~~p~-~~~~~~ai~~Al~~Agl~~~dId~ve 417 (829)
+.|.|++...-+++.. .... .+-..+++++||++||++++|||.+.
T Consensus 4 vaIvG~g~t~~~~~~~-~~~~~~el~~eA~~~Al~DAgl~~~dID~~~ 50 (352)
T PRK07937 4 VAVVGFAQAPHVRRTD-GTTNGVEMLMPCFAELYAELGITKSDIGFWC 50 (352)
T ss_pred EEEEEeeccccccCCC-CCCcHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3488888776555321 1122 46678999999999999999999884
No 341
>PRK07855 lipid-transfer protein; Provisional
Probab=66.25 E-value=24 Score=39.72 Aligned_cols=94 Identities=13% Similarity=0.118 Sum_probs=57.6
Q ss_pred EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcccc
Q psy11396 371 CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCAL 450 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v 450 (829)
+.|.|++...-+++.. ....+-..+|+++||++|||+++|||.+...... ... ...+...++-. ...++
T Consensus 6 v~IvG~g~t~~~r~~~--~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~---~~~l~~~lGl~----~~~~~ 74 (386)
T PRK07855 6 AAIVGIGATEFSKNSG--RSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNP---EIAVARALGIG----ELKFF 74 (386)
T ss_pred EEEEEeeecccccCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--ccc---HHHHHHHCCCC----CCcce
Confidence 4588888765554421 1124556889999999999999999988652211 111 12344444420 00111
Q ss_pred CCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 451 GSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 451 ~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
.. =+..|++|...+..+...++.|.
T Consensus 75 ~~-----v~~gg~sg~~~~~~A~~~I~sG~ 99 (386)
T PRK07855 75 SR-----IHYGGGAACATVQQAAMAVATGV 99 (386)
T ss_pred ee-----ecCCcHHHHHHHHHHHHHHHCCC
Confidence 11 14568888888999999998874
No 342
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=65.96 E-value=20 Score=40.33 Aligned_cols=80 Identities=10% Similarity=0.027 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-hHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD-PIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD-~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li 470 (829)
.+-..+++++||+++|++++|||.+.+ ++.++..+ +.....+....+-. . ..+.-.+ ...+++|+..+.
T Consensus 22 ~~La~~A~~~Al~dAgl~~~dID~vv~-g~~~~~~~~~~~a~~va~~lGl~---~-~~~~~~v-----~~~Casg~~al~ 91 (386)
T TIGR01930 22 EDLGAAVIKELLERNPLDPELIDDVIF-GNVLQAGEQQNIARQAALLAGLP---E-SVPAYTV-----NRQCASGLQAVI 91 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCCCCChHHHHHHHHcCCC---C-Cceeeee-----cchhhHHHHHHH
Confidence 455688999999999999999999875 33332221 22222233333310 0 1122111 246888888899
Q ss_pred HHHHHHhcCCC
Q psy11396 471 KIILSLKHKVL 481 (829)
Q Consensus 471 ~~~l~L~~~~i 481 (829)
.+...++.|..
T Consensus 92 ~A~~~I~sG~~ 102 (386)
T TIGR01930 92 LAAQLIRAGEA 102 (386)
T ss_pred HHHHHHHCCCC
Confidence 99999988753
No 343
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=64.87 E-value=13 Score=43.87 Aligned_cols=101 Identities=16% Similarity=0.024 Sum_probs=59.8
Q ss_pred ccCCCCEEEEecccccchhhhhhh----ccccccccccceeccccccccccCCCcceecccc-cc------------CHH
Q psy11396 647 LYCKIPVIAAMQGHAIGAGWAMGL----FCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQ-RF------------GKI 709 (829)
Q Consensus 647 ~~~~kp~Iaav~G~a~GgG~~lal----~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r-~i------------G~~ 709 (829)
.....|.|.+|-|.++|+|...+. ..|++++. |...+|+.++.++...+.+ .+ -..
T Consensus 436 a~~~VP~isvi~g~a~G~g~~aM~g~~~~~d~~~aw-------p~A~i~vmg~e~aa~il~~~e~~~~~~~~~~~~~~~~ 508 (569)
T PLN02820 436 ACAKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMW-------PNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEE 508 (569)
T ss_pred HhCCCCEEEEEECCcchHHHHHhcCcCCCCCEEEEC-------CCCeEEecCHHHHHHHHHHHHhhhhhhccccCCccHH
Confidence 347889999999999998764332 44555555 5555555554444333322 11 111
Q ss_pred HH-HHH--HhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhc
Q psy11396 710 LS-REI--LFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSL 754 (829)
Q Consensus 710 ~a-~e~--ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~ 754 (829)
.+ ++. -..-+..++-.|.+.|+||.|+++.+.........+.+..
T Consensus 509 ~~~~~~~~~~~~~~~~p~~aa~~~~vD~VIdP~dTR~~l~~~l~~~~~ 556 (569)
T PLN02820 509 EAFKAKTVEAYEREANPYYSTARLWDDGVIDPADTRRVLGLCLSAALN 556 (569)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHcCCcCcccCHHHHHHHHHHHHHHhhc
Confidence 00 111 1112245677889999999999999887766665554433
No 344
>PLN02854 3-ketoacyl-CoA synthase
Probab=64.84 E-value=22 Score=41.44 Aligned_cols=76 Identities=17% Similarity=0.186 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHHHHH
Q psy11396 395 QIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIIL 474 (829)
Q Consensus 395 ~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l 474 (829)
...++.++|+++|++|+|||++.+. |..-.--|.-+.-+.+.++-.. ....-+++....++|+.++-.+-.
T Consensus 192 ~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~--------~i~afdLsgmGCSggl~aL~lA~~ 262 (521)
T PLN02854 192 MFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRT--------DIKSYNLGGMGCSAGLISIDLAND 262 (521)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCC--------CceEEecccchhhhHHHHHHHHHH
Confidence 3567889999999999999999875 3221123444555666665210 111224555667777777777766
Q ss_pred HHhcC
Q psy11396 475 SLKHK 479 (829)
Q Consensus 475 ~L~~~ 479 (829)
.|+.+
T Consensus 263 lL~~~ 267 (521)
T PLN02854 263 LLKAN 267 (521)
T ss_pred HHHhC
Confidence 66654
No 345
>PLN03168 chalcone synthase; Provisional
Probab=64.75 E-value=16 Score=41.14 Aligned_cols=76 Identities=14% Similarity=0.027 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcc-cCcCcchhhhhHHHHHHH
Q psy11396 394 SQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVK-SNIGHSATAAGVIGMIKI 472 (829)
Q Consensus 394 ~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k-~~~GH~~gAsG~~~li~~ 472 (829)
...+|.++||+++|++++|||+|.+. |.|...-|.=..-+.+.+|-. .+++ ....+..+++|+..|-.+
T Consensus 104 La~~Aa~~AL~~ag~~~~dId~lI~~-T~Tg~~~Ps~a~~l~~~LGl~---------~~~~r~~d~~~gC~g~~~aL~~A 173 (389)
T PLN03168 104 LAAEAAQKAIKEWGGRKSDITHIVFA-TTSGVNMPGADHALAKLLGLK---------PTVKRVMMYQTGCFGGASVLRVA 173 (389)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCccHHHHHHHHhCcC---------CcceeeeeeCCccHHHHHHHHHH
Confidence 34779999999999999999998743 444433454444455555521 1122 233455566666666666
Q ss_pred HHHHhcC
Q psy11396 473 ILSLKHK 479 (829)
Q Consensus 473 ~l~L~~~ 479 (829)
...++.+
T Consensus 174 ~~~i~~~ 180 (389)
T PLN03168 174 KDLAENN 180 (389)
T ss_pred HHHHHhC
Confidence 6666653
No 346
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=64.58 E-value=22 Score=40.11 Aligned_cols=98 Identities=11% Similarity=0.061 Sum_probs=55.3
Q ss_pred EEEEEeeeecC-CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-hHHHHHHHHHhcccCCCCCcc
Q psy11396 371 CIIKGWGVNQD-GKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD-PIEFEALCESFNKFSYHKNFC 448 (829)
Q Consensus 371 a~I~g~~~~~d-g~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD-~~E~~Al~~~~~~~~~~~~~~ 448 (829)
+.|.|++.... +++.. ....+...+|+++||++||++++|||.+.+.-+.....+ ..-...+...+|-. ..
T Consensus 5 v~IvG~g~t~~~~~~~~--~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-----~~ 77 (386)
T PRK08313 5 AAVLGTGQTKYVAKRQD--VSMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-----GK 77 (386)
T ss_pred EEEEEeecCCcCccCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-----CC
Confidence 34788887654 43321 122556788999999999999999998875321111100 00012233333310 01
Q ss_pred ccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 449 ALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 449 ~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
+. . .+ +..+++|...+..+...++.|.
T Consensus 78 ~~--~--~v-~~~casg~~al~~A~~~I~sG~ 104 (386)
T PRK08313 78 PL--I--RV-HTAGSVGGSTAVVAASLVQSGV 104 (386)
T ss_pred ce--E--EE-eccCHHHHHHHHHHHHHHHCCC
Confidence 11 0 11 3457778888888888888763
No 347
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=64.40 E-value=30 Score=39.11 Aligned_cols=100 Identities=13% Similarity=0.032 Sum_probs=57.7
Q ss_pred EEEEEeeeecCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCh-HHHHHHHHHhcccCCCCCc
Q psy11396 371 CIIKGWGVNQDGKTNGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDP-IEFEALCESFNKFSYHKNF 447 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~-~E~~Al~~~~~~~~~~~~~ 447 (829)
+.|.|.+...-++..+. .....+-..+++++||+++|++|+|||.|.+. +.++.++. .=...+....+- ...
T Consensus 4 v~Ivg~~rTpfg~~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g-~~~~~~~~~~~~~~~~~~~Gl----~~~ 78 (393)
T PRK08235 4 TVIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMG-TVLQGGQGQIPSRQAARAAGI----PWE 78 (393)
T ss_pred EEEEecCcCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccCCCCCCHHHHHHHHcCC----CCC
Confidence 45677766555543221 12235566889999999999999999988753 32222221 111112222221 001
Q ss_pred cccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
.|.-.+ +..++||+..+..+...++.|.
T Consensus 79 ~p~~~V-----~~~CaSg~~Al~~A~~~I~sG~ 106 (393)
T PRK08235 79 VQTETV-----NKVCASGLRAVTLADQIIRAGD 106 (393)
T ss_pred cceeeh-----hhhhhHHHHHHHHHHHHHHCCC
Confidence 222111 4468899999999999998874
No 348
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=64.26 E-value=27 Score=39.44 Aligned_cols=102 Identities=10% Similarity=0.001 Sum_probs=57.9
Q ss_pred EEEEEeeeecCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCcc
Q psy11396 371 CIIKGWGVNQDGKTNGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFC 448 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~ 448 (829)
+.|.|.+...-++..+. .....+-..++++++|+++|++|+|||+|.. |+.+..+...- -+....++..-+ ...
T Consensus 9 V~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~-G~~~~~~~~~~-~~~~~~l~ag~~--~~~ 84 (397)
T PRK06954 9 IVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVM-GCVLPAGQGQA-PARQAALGAGLP--LSV 84 (397)
T ss_pred EEEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEE-EecCCCccchH-HHHHHHHcCCCC--CCc
Confidence 34667766554442111 1222556688999999999999999998764 22222222111 111112221100 011
Q ss_pred ccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 449 ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 449 ~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
|...+ +..++||+..+..+..+++.|..
T Consensus 85 p~~~V-----~~aCaSG~~Av~~A~~~I~sG~~ 112 (397)
T PRK06954 85 GCTTV-----NKMCGSGMRAAMFAHDMLVAGSV 112 (397)
T ss_pred cEeec-----cccchHHHHHHHHHHHHHHCCCC
Confidence 22111 45689999999999999998753
No 349
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=64.08 E-value=21 Score=39.31 Aligned_cols=79 Identities=18% Similarity=0.181 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~ 471 (829)
.+...+|+++||+++|++++|||++.+..+......+.-+..+...++-. ..++.- .+.+ .+++|+..+..
T Consensus 62 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~----~~~~~~----~v~~-~C~~~~~al~~ 132 (338)
T PRK09258 62 SDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLP----KSCANF----DVSN-ACLGFLNGMLD 132 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCC----CCCcee----ehhh-hhHHHHHHHHH
Confidence 45678899999999999999999987532222233344344455555421 001111 1222 45666666666
Q ss_pred HHHHHhcC
Q psy11396 472 IILSLKHK 479 (829)
Q Consensus 472 ~~l~L~~~ 479 (829)
+...++.|
T Consensus 133 A~~~i~~g 140 (338)
T PRK09258 133 AANMIELG 140 (338)
T ss_pred HHHHHHcC
Confidence 66666665
No 350
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=62.74 E-value=39 Score=38.63 Aligned_cols=101 Identities=14% Similarity=0.110 Sum_probs=59.8
Q ss_pred CCCceEEEEEEeeeecCCCCCCC-CC-CCHHHHHHHHHHHHHHcCCCCCCccEEEec-CCCCCCCChHHHHHHHHHh---
Q psy11396 365 DGDDIYCIIKGWGVNQDGKTNGI-TA-PNTKSQIRLQTKIYKKFNINPNDIQLLEAH-GTGTKLGDPIEFEALCESF--- 438 (829)
Q Consensus 365 ~g~~i~a~I~g~~~~~dg~~~~~-~~-p~~~~~~~ai~~Al~~Agl~~~dId~ve~h-gtgt~~gD~~E~~Al~~~~--- 438 (829)
.|.++ .|.|.+...-++..+. .. +..+-...+++++|+++|++|++||.+..- ..+.. .... +.+..
T Consensus 5 ~~~~V--~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~-~~~~----~ar~~~l~ 77 (430)
T TIGR02446 5 QGERI--AIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMP-EAPN----IAREIVLG 77 (430)
T ss_pred cCCCE--EEEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcC-ccch----HHHHHHHh
Confidence 35454 4777776655553221 11 224555889999999999999999987653 22211 1111 22221
Q ss_pred cccCCCCCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 439 NKFSYHKNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 439 ~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
.+. ...+|...+ +..++||+..+..+..+++.|.
T Consensus 78 aGl---~~~~p~~~V-----~~~CaSG~~A~~~a~~~I~sG~ 111 (430)
T TIGR02446 78 TGM---NVHTDAYSV-----TRACATSFQSAVNVAESIMAGA 111 (430)
T ss_pred CCC---CCCCchhhh-----hhhhhHHHHHHHHHHHHHHCCC
Confidence 110 001222222 5569999999999999999875
No 351
>PRK08304 stage V sporulation protein AD; Validated
Probab=62.35 E-value=19 Score=39.21 Aligned_cols=74 Identities=15% Similarity=0.074 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcc-hhhhhHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHS-ATAAGVIGMI 470 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~-~gAsG~~~li 470 (829)
.+...+|+++||++||++++|||++.+... .+-+.-...+.+.++ + +.++-- -+++++..+.
T Consensus 57 seLa~eAa~~ALekAGI~~~DID~lI~Gdl---l~Q~~sAs~vA~~LG--------I------Pa~dV~gACST~~~AL~ 119 (337)
T PRK08304 57 RKMMEDAIQQALQKANLKKSDIDYLLAGDL---LNQIISANFAARELG--------I------PFLGLYGACSTMMESLA 119 (337)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECC---CCCcchHHHHHHHhC--------C------cEEEEeccCHHHHHHHH
Confidence 456789999999999999999999987643 222322222333222 1 223322 3455566677
Q ss_pred HHHHHHhcCCCC
Q psy11396 471 KIILSLKHKVLP 482 (829)
Q Consensus 471 ~~~l~L~~~~ip 482 (829)
.+...++.|..-
T Consensus 120 lAa~lI~SG~ad 131 (337)
T PRK08304 120 LGSMLIDGGFAD 131 (337)
T ss_pred HHHHHHhcCCCC
Confidence 888888877543
No 352
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=62.08 E-value=39 Score=39.44 Aligned_cols=98 Identities=9% Similarity=-0.016 Sum_probs=59.1
Q ss_pred EEEEEeeeecCCCCCCCC-CCCHHHHHHHHHHHHHHcCCC--CCCccEEEecCCCC-CCCChHHHHHHHHHhcccCCCCC
Q psy11396 371 CIIKGWGVNQDGKTNGIT-APNTKSQIRLQTKIYKKFNIN--PNDIQLLEAHGTGT-KLGDPIEFEALCESFNKFSYHKN 446 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~-~p~~~~~~~ai~~Al~~Agl~--~~dId~ve~hgtgt-~~gD~~E~~Al~~~~~~~~~~~~ 446 (829)
..|.|++....+...... ....+-..+|+++|+++||++ ++|||.+.+-.+.+ ...+. ...+...+|- .
T Consensus 6 ~~IVGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~--~~~la~~lGl-~---- 78 (498)
T PRK08257 6 PVIVGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDP--PGLLAERLGA-D---- 78 (498)
T ss_pred EEEEEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCH--HHHHHHHcCC-C----
Confidence 358888876665432111 012355678999999999999 99999876421211 11222 1334444442 0
Q ss_pred ccccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 447 FCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 447 ~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
+.+. ...++.|.++...+..+..++..|.
T Consensus 79 p~~~-----~~~~~GG~s~~~~v~~Aa~~IasG~ 107 (498)
T PRK08257 79 PART-----VYSPVGGNSPQRLVNEAALRIAAGE 107 (498)
T ss_pred Ccce-----eEecCCCHHHHHHHHHHHHHHHCCC
Confidence 0011 1245678889899999999998884
No 353
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=61.96 E-value=35 Score=38.98 Aligned_cols=101 Identities=12% Similarity=0.051 Sum_probs=58.1
Q ss_pred EEEEEeeeecCCCCCC-C-CCCCHHHHHHHHHHHHHHcCCCCCCccEEEec-CCCCCCCChHHHHHHHHHhcccCCCCCc
Q psy11396 371 CIIKGWGVNQDGKTNG-I-TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH-GTGTKLGDPIEFEALCESFNKFSYHKNF 447 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~-~-~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h-gtgt~~gD~~E~~Al~~~~~~~~~~~~~ 447 (829)
+.|.|.+...-++..+ + ..+..+-...+++++|+++|++++|||.+.+- ..+. ..+........ +..... ..
T Consensus 9 V~Ivg~~rTpfg~~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~-~~~~~~~r~~~--l~~gl~--~~ 83 (427)
T PRK09268 9 VAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKH-SRDFNLTRECV--LGSALS--PY 83 (427)
T ss_pred EEEEecCcCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccC-CccccHHHHHH--HHcCCC--CC
Confidence 4567766655444321 1 12224556789999999999999999987663 2221 11222222211 111000 01
Q ss_pred cccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
.|...+ +..++||+..+..+...++.|..
T Consensus 84 ~p~~~V-----~~~CaSG~~ai~~A~~~I~sG~~ 112 (427)
T PRK09268 84 TPAYDL-----QQACGTGLEAAILVANKIALGQI 112 (427)
T ss_pred Cceeee-----echhhHHHHHHHHHHHHHHCCCC
Confidence 122221 55789999999999999988854
No 354
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=61.70 E-value=41 Score=36.54 Aligned_cols=79 Identities=14% Similarity=0.128 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-ChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHH
Q psy11396 391 NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLG-DPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGM 469 (829)
Q Consensus 391 ~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~g-D~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~l 469 (829)
..+...++++++|+++|++++|||++.+ ++.++.. .+.-...+...++-. ..+.- .+ +..+++|+..+
T Consensus 48 ~~~l~~~a~~~aL~~ag~~~~~Id~li~-~~~~~~~~~~~~~~~i~~~lg~~-----~~~~~----~v-~~~C~s~~~al 116 (324)
T cd00827 48 VPTMAVEAARRALERAGIDPDDIGLLIV-ATESPIDKGKSAATYLAELLGLT-----NAEAF----DL-KQACYGGTAAL 116 (324)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCccHHHHHHHHcCCC-----CCcee----eh-hhhhHHHHHHH
Confidence 3566788999999999999999999875 3333322 222233344444421 01111 11 13456677778
Q ss_pred HHHHHHHhcCC
Q psy11396 470 IKIILSLKHKV 480 (829)
Q Consensus 470 i~~~l~L~~~~ 480 (829)
..+...++.|.
T Consensus 117 ~~A~~~i~~g~ 127 (324)
T cd00827 117 QLAANLVESGP 127 (324)
T ss_pred HHHHHHHHcCC
Confidence 88888887764
No 355
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=61.64 E-value=27 Score=39.30 Aligned_cols=97 Identities=11% Similarity=0.045 Sum_probs=54.8
Q ss_pred EEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC---CCChHHHHHHHHHhcccCCCCCcc
Q psy11396 372 IIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK---LGDPIEFEALCESFNKFSYHKNFC 448 (829)
Q Consensus 372 ~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~---~gD~~E~~Al~~~~~~~~~~~~~~ 448 (829)
.|.|++...-++.. ..+..+-..+++++||+++|++++|||.+.+. +.++ .+.+.-..-+...++- . ..
T Consensus 5 ~IvG~~~tp~~~~~--~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g-~~~~~~~~~~~~~a~~va~~lGl---~--~~ 76 (389)
T PRK06064 5 AIIGVGQTKFGELW--DVSLRDLAVEAGLEALEDAGIDGKDIDAMYVG-NMSAGLFVSQEHIAALIADYAGL---A--PI 76 (389)
T ss_pred EEEEcccccceecC--CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccccccccccHHHHHHHHcCC---C--CC
Confidence 46676655433321 12224556789999999999999999998753 2211 1111112222333331 0 01
Q ss_pred ccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 449 ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 449 ~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
+... =...+++|...+..+...++.|..
T Consensus 77 ~~~~-----v~~aCasg~~ai~~A~~~I~sG~~ 104 (389)
T PRK06064 77 PATR-----VEAACASGGAALRQAYLAVASGEA 104 (389)
T ss_pred CeeE-----EeCCcHHHHHHHHHHHHHHHCCCC
Confidence 1111 134578888888889888888753
No 356
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=61.39 E-value=28 Score=38.11 Aligned_cols=78 Identities=15% Similarity=0.078 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~ 471 (829)
.+-..+++++||+++|++|+|||++... +.++..-......+...++.. ..+.-. + ...+++|+..+..
T Consensus 52 ~~la~~A~~~aL~~ag~~~~dId~vi~~-s~~~~~~~~~~~~v~~~Lg~~-----~~~~~~----v-~~~Casg~~al~~ 120 (326)
T CHL00203 52 TKLAAEAANKALDKAHMDPLEIDLIILA-TSTPDDLFGSASQLQAEIGAT-----RAVAFD----I-TAACSGFILALVT 120 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCchHHHHHHHhCCC-----CCceee----e-cccchhHHHHHHH
Confidence 4566889999999999999999999853 433321111122344444421 111111 1 1235667777777
Q ss_pred HHHHHhcCC
Q psy11396 472 IILSLKHKV 480 (829)
Q Consensus 472 ~~l~L~~~~ 480 (829)
+...++.|.
T Consensus 121 A~~~i~sg~ 129 (326)
T CHL00203 121 ATQFIQNGS 129 (326)
T ss_pred HHHHHHcCC
Confidence 777777764
No 357
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=60.25 E-value=26 Score=39.19 Aligned_cols=78 Identities=9% Similarity=0.034 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-ChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLG-DPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~g-D~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li 470 (829)
.+-..+++++||+++|++++|||.+.+. +..... ......-+...++-. ..+... =...+++|+..+.
T Consensus 17 ~eL~~~A~~~Al~dagl~~~~Id~vi~g-~~~~~~~~~~~a~~va~~lGl~-----~~~~~~-----v~~~c~sg~~al~ 85 (375)
T cd00829 17 LELAAEAARAALDDAGLEPADIDAVVVG-NAAGGRFQSFPGALIAEYLGLL-----GKPATR-----VEAAGASGSAAVR 85 (375)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEe-cccccccccchHHHHHHHcCCC-----Ccceee-----EeCccHHHHHHHH
Confidence 5566789999999999999999988753 222211 122233344444310 111111 1456888888898
Q ss_pred HHHHHHhcCC
Q psy11396 471 KIILSLKHKV 480 (829)
Q Consensus 471 ~~~l~L~~~~ 480 (829)
.+...++.|.
T Consensus 86 ~Aa~~I~sG~ 95 (375)
T cd00829 86 AAAAAIASGL 95 (375)
T ss_pred HHHHHHHhCC
Confidence 8988888874
No 358
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=59.82 E-value=22 Score=38.64 Aligned_cols=73 Identities=14% Similarity=0.097 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcc-hhhhhHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHS-ATAAGVIGMI 470 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~-~gAsG~~~li 470 (829)
.....+|+++||++||++++|||++.+..+ .+.+.-+..+.+.++ + +.++-. -+++++..+.
T Consensus 51 ~eLa~eAa~~ALekAGL~~~DID~IIvGdl---~~Q~~~As~vA~~LG--------I------P~fdV~~ACSTf~~AL~ 113 (327)
T TIGR02845 51 RKLMEDAVNLALKKANLKKDDVDFFLAGDL---LNQIITANFVARDLG--------I------PFLGLYGACSTSMETLA 113 (327)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeCC---CCcccHHHHHHHHhC--------C------CEEEEeccCHHHHHHHH
Confidence 446788999999999999999999987432 222222333333333 1 123333 3455566777
Q ss_pred HHHHHHhcCCC
Q psy11396 471 KIILSLKHKVL 481 (829)
Q Consensus 471 ~~~l~L~~~~i 481 (829)
.+...++.|..
T Consensus 114 lAa~lI~SG~a 124 (327)
T TIGR02845 114 LGAMLVDGGFA 124 (327)
T ss_pred HHHHHHhCCCC
Confidence 88888888754
No 359
>PLN02287 3-ketoacyl-CoA thiolase
Probab=59.81 E-value=20 Score=41.18 Aligned_cols=100 Identities=13% Similarity=0.101 Sum_probs=57.5
Q ss_pred EEEEEeeeecCCCC-CCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC--hHHHHHHHHHhcccCCCC
Q psy11396 371 CIIKGWGVNQDGKT-NGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD--PIEFEALCESFNKFSYHK 445 (829)
Q Consensus 371 a~I~g~~~~~dg~~-~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD--~~E~~Al~~~~~~~~~~~ 445 (829)
+.|.|.+...-+.. .+. .....+-..+++++||+++|++++|||.|.+ |+.+..+. .....-+....+- .
T Consensus 48 V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~-G~~~~~~~~~~~~~r~~a~~~Gl-~--- 122 (452)
T PLN02287 48 VVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVV-GTVLAPGSQRANECRMAAFYAGF-P--- 122 (452)
T ss_pred EEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeecCcccccchHHHHHHHHCCC-C---
Confidence 44777776655542 111 1222555688999999999999999998864 33322111 1111112222221 0
Q ss_pred CccccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 446 ~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
..+|...+ +..++||+..+..+..+++.|.
T Consensus 123 ~~~pa~~V-----~~~CaSG~~Ai~~Aa~~I~sG~ 152 (452)
T PLN02287 123 ETVPVRTV-----NRQCSSGLQAVADVAAAIKAGF 152 (452)
T ss_pred CCcceEEE-----eccCchHHHHHHHHHHHHHcCC
Confidence 00121111 5678999999999999998874
No 360
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=57.92 E-value=32 Score=37.32 Aligned_cols=79 Identities=10% Similarity=-0.000 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~ 471 (829)
.+...+++++||+++|++|+|||.+....+......+.-+..+...++-. ..+.- .+ ...+++|+..+..
T Consensus 52 ~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-----~~~~~----~v-~~~C~s~~~al~~ 121 (318)
T TIGR00747 52 STMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-----GIPAF----DL-SAACAGFIYALSV 121 (318)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-----CCcEe----eh-hhhhHHHHHHHHH
Confidence 55678899999999999999999887543322222233334455555521 01111 12 2346677777877
Q ss_pred HHHHHhcCC
Q psy11396 472 IILSLKHKV 480 (829)
Q Consensus 472 ~~l~L~~~~ 480 (829)
+...++.|.
T Consensus 122 A~~~i~~g~ 130 (318)
T TIGR00747 122 AKQYIESGK 130 (318)
T ss_pred HHHHHHcCC
Confidence 877787763
No 361
>PLN03170 chalcone synthase; Provisional
Probab=57.85 E-value=24 Score=39.98 Aligned_cols=75 Identities=15% Similarity=-0.040 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCccc-CcCcchhhhhHHHHHHH
Q psy11396 394 SQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKS-NIGHSATAAGVIGMIKI 472 (829)
Q Consensus 394 ~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~-~~GH~~gAsG~~~li~~ 472 (829)
...+|.++||+++|++++|||++.. .|.|...-|.=..-+.+.+|-. .+++. ...+..+++|+.+|-.+
T Consensus 109 La~~Aa~~AL~~ag~~~~dId~lI~-~T~Tg~~~Ps~a~~l~~~LGl~---------~~~~r~~d~~~gC~G~~~aL~~A 178 (401)
T PLN03170 109 LGKAAAQKAIKEWGQPKSKITHLVF-CTTSGVDMPGADYQLTKMLGLR---------PSVNRLMMYQQGCFAGGTVLRVA 178 (401)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-EccCCCCCChHHHHHHHHhCcC---------cccHHHHhhcChhHHHHHHHHHH
Confidence 4577999999999999999998653 2333322333333345555421 11121 22344445555555555
Q ss_pred HHHHhc
Q psy11396 473 ILSLKH 478 (829)
Q Consensus 473 ~l~L~~ 478 (829)
...++.
T Consensus 179 ~~l~~~ 184 (401)
T PLN03170 179 KDLAEN 184 (401)
T ss_pred HHHHHc
Confidence 554554
No 362
>PLN03173 chalcone synthase; Provisional
Probab=57.00 E-value=29 Score=39.16 Aligned_cols=45 Identities=13% Similarity=0.009 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhc
Q psy11396 394 SQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFN 439 (829)
Q Consensus 394 ~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~ 439 (829)
...+|+++||+++|++++|||+|...- .|...-|.-..-+.+.+|
T Consensus 105 La~~Aa~~AL~~ag~~~~dId~li~~t-~t~~~~P~~a~~l~~~LG 149 (391)
T PLN03173 105 LGKEAAAKAIKEWGQPKSKITHLVFCT-TSGVDMPGADYQLTKLLG 149 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEc-cCCCcccHHHHHHHHHhC
Confidence 346799999999999999999876432 233222433333555554
No 363
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=56.29 E-value=32 Score=38.25 Aligned_cols=48 Identities=15% Similarity=0.123 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhc
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFN 439 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~ 439 (829)
.....+|.++||+++|++++|||++.+.-+.--..-|.-+..+.+.++
T Consensus 61 ~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg 108 (353)
T PRK12880 61 SDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLN 108 (353)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhC
Confidence 455678999999999999999999986533223344555556666665
No 364
>KOG0840|consensus
Probab=55.86 E-value=11 Score=39.09 Aligned_cols=132 Identities=17% Similarity=0.109 Sum_probs=66.0
Q ss_pred cCCcccccccccccchhhhcccccceeeee--eCCCCeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecc
Q psy11396 582 KDLKNSTVVKGITDAFSYINSSVQYKVIII--TGYENYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQG 659 (829)
Q Consensus 582 ~n~~~~~~~~eL~~~l~~~~~d~~vr~vVl--~g~g~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G 659 (829)
.-++++++-+.+...|-.+..+++-|-|.+ .+-|..-.+|+-+ ++.. -.+.-||-..+-|
T Consensus 98 g~~Idd~va~~viaqlL~Ld~ed~~K~I~lyINSPGG~vtaglAI------YDtM------------q~ik~~V~Tic~G 159 (275)
T KOG0840|consen 98 GQPIDDDVANLVIAQLLYLDSEDPKKPIYLYINSPGGSVTAGLAI------YDTM------------QYIKPDVSTICVG 159 (275)
T ss_pred CCcCcHHHHHHHHHHHHHhhccCCCCCeEEEEeCCCCccchhhhH------HHHH------------HhhCCCceeeehh
Confidence 445566666666666655554444444443 3333333333322 1110 0122333333346
Q ss_pred cccchhhhhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHH------------hcC---------
Q psy11396 660 HAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREIL------------FTA--------- 718 (829)
Q Consensus 660 ~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~l------------l~g--------- 718 (829)
.|.+-|.-|.. -.+.+-++++|..++=|.-+.|+..--.. -=.-+|+|++ .||
T Consensus 160 ~Aas~aalLLa-----aG~KG~R~alPnsriMIhQP~gga~Gqa~-Di~i~akE~~~~k~~l~~i~a~~Tgq~~e~i~~d 233 (275)
T KOG0840|consen 160 LAASMAALLLA-----AGAKGKRYALPNSRIMIHQPSGGAGGQAT-DIVIQAKELMRIKEYLNEIYAKHTGQPLEVIEKD 233 (275)
T ss_pred hHHhHHHHHHh-----cCCCcceeecCCceeEEeccCCCcCccch-HHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHhh
Confidence 55554433322 23566788888888766544444210000 0022333332 233
Q ss_pred ----CccCHHHHHHcCCcccccC
Q psy11396 719 ----SEFKGKELKERGISMPVLP 737 (829)
Q Consensus 719 ----~~~~a~eA~~~GLv~~v~~ 737 (829)
+.++|+||+++||||+|..
T Consensus 234 ~dRd~fmsa~EA~eyGliD~v~~ 256 (275)
T KOG0840|consen 234 MDRDRFMSAEEAKEYGLIDKVID 256 (275)
T ss_pred hcccccCCHHHHHHhcchhhhhc
Confidence 3489999999999999985
No 365
>PRK12404 stage V sporulation protein AD; Provisional
Probab=55.79 E-value=30 Score=37.55 Aligned_cols=72 Identities=13% Similarity=0.071 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcch-hhhhHHHHHH
Q psy11396 393 KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSA-TAAGVIGMIK 471 (829)
Q Consensus 393 ~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~-gAsG~~~li~ 471 (829)
..+.+|+++||++||++++|||++.....- +..+=...+.+.++ .+.+|--. +++++..+..
T Consensus 56 ~L~~EA~~~AL~kAGI~~~DID~i~vGdL~---nQ~ipssfvar~LG--------------IP~~gV~gACSTg~eAL~l 118 (334)
T PRK12404 56 KLLEEACSRAIEKAKLRKEDIQFFLAGDLM---NQITPTSFAARTLG--------------IPYLGLFGACSTSMEGLAL 118 (334)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecC---CCcCcHHHHHHHhC--------------CCccceeecCHHHHHHHHH
Confidence 456889999999999999999999986433 21221122223332 12244433 4555666777
Q ss_pred HHHHHhcCCC
Q psy11396 472 IILSLKHKVL 481 (829)
Q Consensus 472 ~~l~L~~~~i 481 (829)
+.+.++.|..
T Consensus 119 Aa~~VaSG~A 128 (334)
T PRK12404 119 AALIVNSGGA 128 (334)
T ss_pred HHHHHHcCCC
Confidence 8888888754
No 366
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=54.57 E-value=28 Score=38.52 Aligned_cols=79 Identities=11% Similarity=0.137 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-hHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhh-hHHH
Q psy11396 391 NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD-PIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAA-GVIG 468 (829)
Q Consensus 391 ~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD-~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAs-G~~~ 468 (829)
..+...+|.++||+++|++++|||.+.+ ++.++... +.-+.-+...++-. . .++ .-.+ ..+++ ++..
T Consensus 50 ~~~la~~Aa~~aL~~agl~~~dID~li~-~s~~~~~~~p~~a~~v~~~LGl~-~---~~~----~~dv--~~aC~g~~~a 118 (345)
T TIGR00748 50 TATIGVEAARNALKRAKIDPKDIGAVYV-GSESHPYAVKPTATIVAEAIGAT-P---DLT----AADL--EFACKAGTAG 118 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCccccchHHHHHHHcCCC-C---Cce----EEEH--HHhHHHHHHH
Confidence 3566788999999999999999999875 44443211 22222344444420 0 011 1112 22444 6666
Q ss_pred HHHHHHHHhcCC
Q psy11396 469 MIKIILSLKHKV 480 (829)
Q Consensus 469 li~~~l~L~~~~ 480 (829)
+..+...++.|.
T Consensus 119 l~~A~~~i~sg~ 130 (345)
T TIGR00748 119 IQACMGLVASGM 130 (345)
T ss_pred HHHHHHHHHcCC
Confidence 777777777763
No 367
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=54.50 E-value=35 Score=37.21 Aligned_cols=78 Identities=14% Similarity=0.088 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~ 471 (829)
.+...+++++||+++|++++|||++....+......+.-+..+...++-. ..+. -.+. ..+++|+..+..
T Consensus 54 ~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-----~~~~----~~v~-~~C~~~~~al~~ 123 (325)
T PRK12879 54 SDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-----NAAA----FDIN-AACAGFLYGLET 123 (325)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-----CCcE----EEEC-ccchHHHHHHHH
Confidence 45668899999999999999999986432211122233333455555421 0111 1222 345666777777
Q ss_pred HHHHHhcC
Q psy11396 472 IILSLKHK 479 (829)
Q Consensus 472 ~~l~L~~~ 479 (829)
+...|+.|
T Consensus 124 A~~~l~~g 131 (325)
T PRK12879 124 ANGLITSG 131 (325)
T ss_pred HHHHHHcC
Confidence 77777765
No 368
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=54.17 E-value=58 Score=36.68 Aligned_cols=95 Identities=14% Similarity=0.131 Sum_probs=54.4
Q ss_pred EEEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcC-CCC-CCccEEEecCCCCCCCChHHH-HHHHHHhcccCCCCCc
Q psy11396 371 CIIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFN-INP-NDIQLLEAHGTGTKLGDPIEF-EALCESFNKFSYHKNF 447 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Ag-l~~-~dId~ve~hgtgt~~gD~~E~-~Al~~~~~~~~~~~~~ 447 (829)
+.|.|++...-+++. ......+-..+++++||++|| +++ +|||.+.+ ++.......... ..+...++.. .
T Consensus 6 vaIvG~g~t~~~~~~-~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~-~~~~~~~~~~~~~~~~~~~lg~~---~-- 78 (385)
T PRK06066 6 VAIVGIGWYGFRPTT-PEVSFREMMFEAASRAYKDAGNINPRRDVDSFIS-CQEDFWEGIAIADEFAPDQIGGA---M-- 78 (385)
T ss_pred EEEEEeeecCCcCCC-CCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEE-ecCcccCcccccchhHHHHcccC---C--
Confidence 348888877655321 112225667889999999999 997 79998765 221111000000 0122233321 0
Q ss_pred cccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
.+.- .+ +++|...+..++.+++.|.
T Consensus 79 ~~~~----~v----~~sg~~a~~~A~~aV~sG~ 103 (385)
T PRK06066 79 RPTM----TV----AGDGLQGLAHAVMHINSGL 103 (385)
T ss_pred CCeE----EE----eCcHHHHHHHHHHHHHcCC
Confidence 1111 11 6788888999999998874
No 369
>KOG1393|consensus
Probab=53.66 E-value=2.1e+02 Score=31.75 Aligned_cols=170 Identities=15% Similarity=0.130 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCceEEEEccccccccccccCccccchhhhccccccchhhHhhhhccCCC----ccee
Q psy11396 204 RLFLQNCWTCIEDAGYNPFSLSGSLCGVFVGCAVSDYNKLITDPKMYNAYALMGESVSILPARVSYFLNLQG----PCLA 279 (829)
Q Consensus 204 ~l~l~aa~~AL~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~G----p~~t 279 (829)
.|.+.++...+|.-.++++.+. -+-||+... ..... .+=..+-..|+=.| -.+.
T Consensus 62 Sl~ltvvs~Lmery~i~~~~IG----RLEVGTETi-----iDKSK-------------SVKt~LMqLF~~sgNtdIEGiD 119 (462)
T KOG1393|consen 62 SLSLTVVSRLMERYNIDPDSIG----RLEVGTETI-----IDKSK-------------SVKTVLMQLFEESGNTDIEGID 119 (462)
T ss_pred hhhHHHHHHHHHHhCCChhhcc----eEEecceec-----cccch-------------HHHHHHHHHhhhcCCCcccccc
Confidence 4678888899999999888775 455665321 10000 01111222232111 2234
Q ss_pred eccchhhHHHHHHHHHHHHHcCCC--CEEEEeccccccChHHHHHHHHcCCCCCCCCCCCCCCCCCCcccccceEEEEEc
Q psy11396 280 IDTACSSSLVAIAHACDSLILGNS--KIALAGGVYIINTPDIHIKMSKSGMLSPDGHCYSFDQRANGFVPGEGVGVLMLK 357 (829)
Q Consensus 280 v~~acsSgl~Al~~A~~~I~~G~~--d~aLvgG~e~~~~~~~~~~~~~~g~ls~~~~~~pfd~~~~G~~~gEGaaalvL~ 357 (829)
..++|=+|..||..|.++|.+-.- ..+||+..|... -+++.+||- -|-||.|+++.
T Consensus 120 ttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAv--------------Y~~G~aRpT--------GGAgAVAmLIg 177 (462)
T KOG1393|consen 120 TTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAV--------------YAKGNARPT--------GGAGAVAMLIG 177 (462)
T ss_pred ccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEE--------------ecCCCCCCC--------CCcceEEEEEc
Confidence 568999999999999999987543 456666666532 244556652 36788899887
Q ss_pred cchhhhhCCCceEEE---EEEeeeec--CCCCCC--CCC------CCHHHHHHHHHHHHH------------HcCCCCCC
Q psy11396 358 KLKDAKKDGDDIYCI---IKGWGVNQ--DGKTNG--ITA------PNTKSQIRLQTKIYK------------KFNINPND 412 (829)
Q Consensus 358 ~~~~A~~~g~~i~a~---I~g~~~~~--dg~~~~--~~~------p~~~~~~~ai~~Al~------------~Agl~~~d 412 (829)
+- ++ +.. ++|+-+.+ |-..+. ..- ++......|+..+|. .-+....+
T Consensus 178 Pn-------Ap-i~ferglr~thM~hayDFyKPdl~SEyPvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l~~ 249 (462)
T KOG1393|consen 178 PN-------AP-IIFERGLRATHMQHAYDFYKPDLLSEYPVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNLNS 249 (462)
T ss_pred CC-------Cc-eEecccchhhhhhhhhhccCCCCCCcCceecCeehHHHHHHHHHHHHHHHHHHHHHHhccccCccccc
Confidence 52 22 222 33332221 111111 111 123344555555552 11344568
Q ss_pred ccEEEecCCCCCC
Q psy11396 413 IQLLEAHGTGTKL 425 (829)
Q Consensus 413 Id~ve~hgtgt~~ 425 (829)
.||+..|...+++
T Consensus 250 fdy~ifHsP~cKl 262 (462)
T KOG1393|consen 250 FDYIIFHSPYCKL 262 (462)
T ss_pred CCeEEEeCchhhh
Confidence 9999999887754
No 370
>KOG1202|consensus
Probab=53.65 E-value=7.5 Score=48.22 Aligned_cols=50 Identities=8% Similarity=0.169 Sum_probs=45.1
Q ss_pred HHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCce
Q psy11396 37 KIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTI 88 (829)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~ 88 (829)
.-|+-+||..|-..|..|.... |||. |||+.+|++..|+....+-|++..
T Consensus 2011 atiA~IlGlrD~~~vn~~asLa-DLGl-DSLMsvEikQtLER~~dlVLS~qE 2060 (2376)
T KOG1202|consen 2011 ATIAHILGLRDLKAVNDDASLA-DLGL-DSLMSVEIKQTLEREFDLVLSAQE 2060 (2376)
T ss_pred HHHHHHhcchhHhhccCCCchh-hccc-hhhhhHHHHHHHhhhhceeeeHHH
Confidence 4578899999999999998888 9999 999999999999999998887754
No 371
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=53.17 E-value=53 Score=37.01 Aligned_cols=101 Identities=11% Similarity=0.071 Sum_probs=57.6
Q ss_pred EEEEEeeeecCCCCCC-CCC-CCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC--hHHHHHHHHHhcccCCCCC
Q psy11396 371 CIIKGWGVNQDGKTNG-ITA-PNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD--PIEFEALCESFNKFSYHKN 446 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~-~~~-p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD--~~E~~Al~~~~~~~~~~~~ 446 (829)
+.|.|.+...-++..+ +.. +..+-...+++++|+++|++|+|||.+.+--. ...+. ..-.+.+....+- . .
T Consensus 4 V~Ivg~~rTpfgk~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~-~~~~~q~~~~ar~~~l~~Gl-~---~ 78 (387)
T PRK07850 4 PVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCV-TQAGEQSNNITRTAWLHAGL-P---Y 78 (387)
T ss_pred EEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec-cccccccchHHHHHHHhCCC-C---C
Confidence 3567777666555322 111 12445578999999999999999998776322 11111 1111111111110 0 0
Q ss_pred ccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 447 FCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 447 ~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
.+|...+ +..++||+..+..++..++.|..
T Consensus 79 ~~p~~tV-----~~~CaSG~~A~~~A~~~I~sG~~ 108 (387)
T PRK07850 79 HVGATTI-----DCQCGSAQQANHLVAGLIAAGAI 108 (387)
T ss_pred CCceEEE-----ecccccHHHHHHHHHHHHHCCCC
Confidence 1222111 55699999999999999998854
No 372
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=52.98 E-value=55 Score=36.93 Aligned_cols=101 Identities=6% Similarity=-0.049 Sum_probs=56.8
Q ss_pred EEEEeeeecCCCC-CC--CCCCCHHHHHHHHHHHHHHcCCCCCCccEEEec-CCCCCCCChHHHHHHHHHhcccCCCCCc
Q psy11396 372 IIKGWGVNQDGKT-NG--ITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAH-GTGTKLGDPIEFEALCESFNKFSYHKNF 447 (829)
Q Consensus 372 ~I~g~~~~~dg~~-~~--~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~h-gtgt~~gD~~E~~Al~~~~~~~~~~~~~ 447 (829)
.|.|.+...-+.+ .. ...+..+-...+++++|+++|++|+|||.|.+- .+.....-..-+..+....+- ...
T Consensus 5 ~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl----~~~ 80 (392)
T PRK07108 5 VIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGL----PVT 80 (392)
T ss_pred EEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCC----CCC
Confidence 4666665544432 11 111224556789999999999999999987652 221111001122222222221 001
Q ss_pred cccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
+|...+ +..++||+..+..+..+++.|..
T Consensus 81 ~p~~~V-----~~aCaSg~~Al~~A~~~I~sG~~ 109 (392)
T PRK07108 81 VPGMTV-----NRFCSSGLQTIALAAQRVIAGEG 109 (392)
T ss_pred Cceeee-----cchhhHHHHHHHHHHHHHHCCCC
Confidence 222111 56689999999999999998753
No 373
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=52.81 E-value=68 Score=36.66 Aligned_cols=100 Identities=12% Similarity=0.007 Sum_probs=56.9
Q ss_pred EEEEEeeeecCCCCCC-CCCC-CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-hHHHHHHHHHhcccCCCCCc
Q psy11396 371 CIIKGWGVNQDGKTNG-ITAP-NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD-PIEFEALCESFNKFSYHKNF 447 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~-~~~p-~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD-~~E~~Al~~~~~~~~~~~~~ 447 (829)
+.|.|.+...-++..+ +..- ..+-...+++++|+++|++|++||.+.+- +....+. ..=...+....+- ...
T Consensus 7 v~Ivg~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G-~~~~~~~~~~~ar~~a~~aGl----~~~ 81 (428)
T PRK08963 7 IAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFG-QVVQMPEAPNIAREIVLGTGM----NVH 81 (428)
T ss_pred EEEEecccCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEe-ccCCCCCccHHHHHHHHHCCC----CCC
Confidence 4566766655444211 1111 23445789999999999999999987653 2111121 1111111111121 001
Q ss_pred cccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 448 CALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 448 ~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
+|...+ +..++||+..+..+...++.|.
T Consensus 82 ~P~~tV-----~~aCaSG~~Ai~~Aa~~I~sG~ 109 (428)
T PRK08963 82 TDAYSV-----SRACATSFQAVANVAESIMAGT 109 (428)
T ss_pred Ccceee-----hhhhHHHHHHHHHHHHHHHCCC
Confidence 232222 4578999999999999998874
No 374
>PLN03172 chalcone synthase family protein; Provisional
Probab=52.81 E-value=42 Score=37.88 Aligned_cols=75 Identities=16% Similarity=0.006 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEe-cCCCCCCCChHHHHHHHHHhcccCCCCCccccCCccc-CcCcchhhhhHHHHHH
Q psy11396 394 SQIRLQTKIYKKFNINPNDIQLLEA-HGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKS-NIGHSATAAGVIGMIK 471 (829)
Q Consensus 394 ~~~~ai~~Al~~Agl~~~dId~ve~-hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~-~~GH~~gAsG~~~li~ 471 (829)
-..+|.++||+++|++++|||+|.+ .-|+ ..-|.-..-+.+.+|-. .+++. ...+..+++|+.+|-.
T Consensus 105 La~~Aa~~aL~~ag~~~~dId~ii~~t~t~--~~~P~~a~~l~~~LGl~---------~~~~~~~~~~~gC~g~~~aL~~ 173 (393)
T PLN03172 105 LGKEAAAKAIKEWGQPKSKITHLVFCTTSG--VDMPGADYQLTKLLGLK---------PSVKRFMMYQQGCFAGGTVLRL 173 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEccCC--CcCchHHHHHHHHhCCC---------CCceEEeeeCCchHHHHHHHHH
Confidence 3467999999999999999998753 3343 22333333355555421 11222 2344555666666666
Q ss_pred HHHHHhcC
Q psy11396 472 IILSLKHK 479 (829)
Q Consensus 472 ~~l~L~~~ 479 (829)
+...++.+
T Consensus 174 A~~~~~~~ 181 (393)
T PLN03172 174 AKDLAENN 181 (393)
T ss_pred HHHHHHcC
Confidence 66666654
No 375
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=52.54 E-value=41 Score=36.45 Aligned_cols=78 Identities=15% Similarity=0.092 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-ChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLG-DPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~g-D~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li 470 (829)
.+...+|+++||+++|++++|||.+.. ++.++.. .+.-...+...++-. ..+. -.+. ..+++|+..+.
T Consensus 51 ~~la~~A~~~al~~ag~~~~~Id~li~-~~~~~~~~~~~~~~~l~~~lg~~-----~~~~----~~v~-~~C~s~~~al~ 119 (320)
T cd00830 51 SDLAVEAAKKALEDAGIDADDIDLIIV-ATSTPDYLFPATACLVQARLGAK-----NAAA----FDIN-AACSGFLYGLS 119 (320)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCCcHHHHHHHHhCCC-----CCcE----eecc-ccchHHHHHHH
Confidence 556788999999999999999999853 4444321 232333455555421 1111 1122 35667777787
Q ss_pred HHHHHHhcCC
Q psy11396 471 KIILSLKHKV 480 (829)
Q Consensus 471 ~~~l~L~~~~ 480 (829)
.+...++.|.
T Consensus 120 ~A~~~i~~g~ 129 (320)
T cd00830 120 TAAGLIRSGG 129 (320)
T ss_pred HHHHHHHcCC
Confidence 7877787763
No 376
>PLN03171 chalcone synthase-like protein; Provisional
Probab=51.57 E-value=40 Score=38.14 Aligned_cols=46 Identities=15% Similarity=0.011 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhc
Q psy11396 393 KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFN 439 (829)
Q Consensus 393 ~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~ 439 (829)
....+|.++||+++|++++|||+|.+ .|.|...-|.-..-+.+.++
T Consensus 110 ~la~~Aa~~aL~~ag~~~~dId~li~-~t~t~~~~P~~a~~v~~~LG 155 (399)
T PLN03171 110 ELAAEAAKKAIAEWGRPAADITHLVV-TTNSGAHIPGVDFRLVPLLG 155 (399)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCchHHHHHHHhC
Confidence 44578999999999999999999874 35554333333333455554
No 377
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=51.51 E-value=67 Score=36.39 Aligned_cols=100 Identities=11% Similarity=0.005 Sum_probs=57.1
Q ss_pred EEEEEeeeecCCCCCC-C-CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCC-CCCC--CChHHHHHHHHHhcccCCCC
Q psy11396 371 CIIKGWGVNQDGKTNG-I-TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGT-GTKL--GDPIEFEALCESFNKFSYHK 445 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~-~-~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgt-gt~~--gD~~E~~Al~~~~~~~~~~~ 445 (829)
++|.|.....-+++.+ + .....+-...+++++|+++|++++|||.+..--+ .... ... +.-+....+ . .
T Consensus 4 v~Iv~~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~--ar~~~~~~G---l-p 77 (401)
T PRK08131 4 AYIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNV--ARNALLLAG---L-P 77 (401)
T ss_pred EEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccH--HHHHHHhcC---C-C
Confidence 3466665555444321 1 1122455678999999999999999998766322 1111 111 111111111 0 1
Q ss_pred CccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 446 ~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
..+|...+ +..++||+..+..+..+++.|..
T Consensus 78 ~~~p~~tV-----~~~CaSG~~Ai~~A~~~I~sG~~ 108 (401)
T PRK08131 78 VTVPGQTV-----NRLCASGLAAVIDAARAITCGEG 108 (401)
T ss_pred CCCceeee-----echhhhHHHHHHHHHHHHHCCCC
Confidence 11223222 55799999999999999998753
No 378
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=51.39 E-value=52 Score=35.92 Aligned_cols=78 Identities=12% Similarity=0.046 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-ChHHHHHHHHHhcccCCCCCccccCCcccCcCc-chhhhhHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLG-DPIEFEALCESFNKFSYHKNFCALGSVKSNIGH-SATAAGVIGM 469 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~g-D~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH-~~gAsG~~~l 469 (829)
.+...+|.+++|+++|++|+|||++. +++.|+.. -+.-+..+...++-.. ..++ .+.. ..+++|+..+
T Consensus 53 ~~la~~Aa~~aL~~ag~~~~dId~li-~~~~~~~~~~p~~a~~v~~~lgl~~---~~~~------~~~v~~~C~~~~~al 122 (329)
T PRK07204 53 SYMGAEAAKKAVEDAKLTLDDIDCII-CASGTIQQAIPCTASLIQEQLGLQH---SGIP------CFDINSTCLSFITAL 122 (329)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE-EECCCCCCCCccHHHHHHHHhCCCC---CCce------EEEccchhHHHHHHH
Confidence 55667899999999999999999975 44444322 2333444555554211 0011 1122 2445555556
Q ss_pred HHHHHHHhcC
Q psy11396 470 IKIILSLKHK 479 (829)
Q Consensus 470 i~~~l~L~~~ 479 (829)
..+...++.|
T Consensus 123 ~~a~~~l~~g 132 (329)
T PRK07204 123 DTISYAIECG 132 (329)
T ss_pred HHHHHHHHCC
Confidence 5565556654
No 379
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=50.99 E-value=73 Score=33.79 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC--CCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK--LGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGM 469 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~--~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~l 469 (829)
.+-...+++++|++++++|++||.|.+ |+... .+-..-..+. +..+. ...+|...+ .-.++||+..+
T Consensus 27 ~~L~~~a~~~al~~~~i~~~~Id~v~~-G~~~~~~~g~~~ar~~~--l~aGl---~~~vp~~~V-----~~~CaSG~~Av 95 (264)
T PF00108_consen 27 EDLAAEAVKAALERAGIDPEDIDAVIV-GNVLQEGEGQNIARQAA--LAAGL---PESVPATTV-----NRACASGLQAV 95 (264)
T ss_dssp HHHHHHHHHHHHHHHTSHGGGEEEEEE-E-SSSCTTTCHHHHHHH--HHTTS----TTSEEEEE-----E-GGGHHHHHH
T ss_pred HHHHHHHHHHHHHhcccchhhhhhcCc-ccccccccchhhhhhhh--hhccc---ccccceeee-----hhhhhHHHHHH
Confidence 455678999999999999999998775 33332 2222211111 11111 111233222 56789999999
Q ss_pred HHHHHHHhcCCC
Q psy11396 470 IKIILSLKHKVL 481 (829)
Q Consensus 470 i~~~l~L~~~~i 481 (829)
..+..+++.|..
T Consensus 96 ~~a~~~I~sG~~ 107 (264)
T PF00108_consen 96 HLAAMAIASGEA 107 (264)
T ss_dssp HHHHHHHHTTS-
T ss_pred HHhhhhhcCCCc
Confidence 999999998743
No 380
>PLN03169 chalcone synthase family protein; Provisional
Probab=50.54 E-value=40 Score=38.07 Aligned_cols=46 Identities=13% Similarity=0.055 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhc
Q psy11396 393 KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFN 439 (829)
Q Consensus 393 ~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~ 439 (829)
....+|.++||+++|++|+|||++... |.|-..-|.-..-+.+.+|
T Consensus 108 ~La~~Aa~~aL~~ag~~~~dId~lI~~-t~t~~~~P~~a~~l~~~LG 153 (391)
T PLN03169 108 QMAVEASLACIKEWGRPVSDITHLVYV-SSSEARLPGGDLYLAKQLG 153 (391)
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEEE-CcCCCCCCcHHHHHHHHhC
Confidence 345789999999999999999987644 3343333433444555554
No 381
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=50.43 E-value=42 Score=37.65 Aligned_cols=78 Identities=15% Similarity=0.105 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC-CCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK-LGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~-~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li 470 (829)
.+...+|+++||+++|++++|||.+.+. +.++ ...+.-...+...++- .+++.- .+ ...+++|+..+.
T Consensus 64 ~~La~~A~~~aL~~agi~~~dId~li~~-s~~~~~~~p~~a~~v~~~Lgl-----~~~~~~----~v-~~~Cas~~~al~ 132 (378)
T PRK06816 64 AQMAAEAIRDLLDDAGFSLGDIELLACG-TSQPDQLMPGHASMVHGELGA-----PPIEVV----SS-AGVCAAGMMALK 132 (378)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-ECCCCcCChHHHHHHHhhCCC-----CCCcee----ee-cCcCHHHHHHHH
Confidence 4566789999999999999999987653 3332 2233333334444431 111111 12 344777777787
Q ss_pred HHHHHHhcCC
Q psy11396 471 KIILSLKHKV 480 (829)
Q Consensus 471 ~~~l~L~~~~ 480 (829)
.+...++.|.
T Consensus 133 ~A~~~i~sg~ 142 (378)
T PRK06816 133 YAYLSVKAGE 142 (378)
T ss_pred HHHHHHHCCC
Confidence 7777777653
No 382
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=50.18 E-value=85 Score=35.43 Aligned_cols=79 Identities=9% Similarity=-0.011 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEe-cCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEA-HGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~-hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li 470 (829)
.+-...+++++|+++|++|+|||.+.. +..+...+...-..+ ....| . ...+|...+ +..++||+..+.
T Consensus 28 ~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~-~~~~G-l---~~~~p~~~V-----~~~CaSG~~Ai~ 97 (392)
T PRK06633 28 PMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQT-LIHAG-I---PKEVPGYTI-----NKVCGSGLKSVA 97 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHH-HHHCC-C---CCCccchhh-----cchhHHHHHHHH
Confidence 445578999999999999999998765 332221222111111 11111 0 111333333 467999999999
Q ss_pred HHHHHHhcCC
Q psy11396 471 KIILSLKHKV 480 (829)
Q Consensus 471 ~~~l~L~~~~ 480 (829)
.+...++.|.
T Consensus 98 ~A~~~I~sG~ 107 (392)
T PRK06633 98 LAANSIMTGD 107 (392)
T ss_pred HHHHHHHcCC
Confidence 9999998874
No 383
>PRK04262 hypothetical protein; Provisional
Probab=50.18 E-value=36 Score=37.69 Aligned_cols=79 Identities=13% Similarity=0.138 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCC-hHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHH
Q psy11396 391 NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGD-PIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGM 469 (829)
Q Consensus 391 ~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD-~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~l 469 (829)
..+...+|+++||+++|++++|||.+.+ ++.++... +.-+..+...++-. ..++. ..+ ...+++|+..+
T Consensus 51 ~~~la~~Aa~~aL~~ag~~~~dId~li~-~s~~~~~~~p~~a~~v~~~Lgl~----~~~~~----~dv-~~~C~~~~~aL 120 (347)
T PRK04262 51 TATIAVEAARNALKRAGIDPKEIGAVYV-GSESHPYAVKPTATIVAEALGAT----PDLTA----ADL-EFACKAGTAAL 120 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEE-EecCCCcccccHHHHHHHHcCCC----CCceE----EEH-HHhHHHHHHHH
Confidence 3566788999999999999999999864 34443221 22222343444320 00111 112 23466667777
Q ss_pred HHHHHHHhcC
Q psy11396 470 IKIILSLKHK 479 (829)
Q Consensus 470 i~~~l~L~~~ 479 (829)
..+...++.|
T Consensus 121 ~~A~~~i~sg 130 (347)
T PRK04262 121 QAAMGLVKSG 130 (347)
T ss_pred HHHHHHHHcC
Confidence 7777777765
No 384
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=49.03 E-value=90 Score=35.35 Aligned_cols=102 Identities=10% Similarity=0.042 Sum_probs=57.1
Q ss_pred EEEEEeeeecCCC-CCC-CC-CCCHHHHHHHHHHHHHHc-CCCCCCccEEEec-CCCCCCCChHHHHHHHHHhcccCCCC
Q psy11396 371 CIIKGWGVNQDGK-TNG-IT-APNTKSQIRLQTKIYKKF-NINPNDIQLLEAH-GTGTKLGDPIEFEALCESFNKFSYHK 445 (829)
Q Consensus 371 a~I~g~~~~~dg~-~~~-~~-~p~~~~~~~ai~~Al~~A-gl~~~dId~ve~h-gtgt~~gD~~E~~Al~~~~~~~~~~~ 445 (829)
+.|.|.+...-++ ..+ +. ....+-..++++++|+++ |++++|||.|.+- .+.. ..+..-...+.....+. .
T Consensus 8 v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~-~~~~~~~ar~~~~~~Gl---~ 83 (399)
T PRK09052 8 AYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPE-AEQGLNVARIGALLAGL---P 83 (399)
T ss_pred EEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCC-CCCCchHHHHHHHHcCC---C
Confidence 4577776655444 221 11 122556678999999997 9999999987653 2221 11111111111112110 0
Q ss_pred CccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 446 ~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
..+|...+ +..++||+..+..+...++.|..
T Consensus 84 ~~~p~~~V-----~~aCaSg~~Al~~A~~~I~sG~~ 114 (399)
T PRK09052 84 NSVGGVTV-----NRFCASGLQAVAMAADRIRVGEA 114 (399)
T ss_pred CCCceeee-----cchhhHHHHHHHHHHHHHHCCCC
Confidence 01222111 45788999999999999988753
No 385
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=48.70 E-value=50 Score=37.20 Aligned_cols=97 Identities=14% Similarity=0.101 Sum_probs=53.8
Q ss_pred EEEEeeeecCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCC--CCCChH-HHHHHHHHhcccCCCCCcc
Q psy11396 372 IIKGWGVNQDGKTNGITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGT--KLGDPI-EFEALCESFNKFSYHKNFC 448 (829)
Q Consensus 372 ~I~g~~~~~dg~~~~~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt--~~gD~~-E~~Al~~~~~~~~~~~~~~ 448 (829)
.|.|.+...-++... ....+-..+++++||+++|++++|||.|.+ |+.. ...+.. ....+....+ ....
T Consensus 5 ~Ivg~g~tpfgr~~~--~~~~eL~~eA~~~AL~dAgl~~~dId~vi~-g~~~~~~~~~~~~~~~~~~~~~g-----l~~~ 76 (389)
T PRK07516 5 SIVGWAHTPFGKLDA--ETLESLIVRVAREALAHAGIAAGDVDGIFL-GHFNAGFSPQDFPASLVLQADPA-----LRFK 76 (389)
T ss_pred EEEeCCcceeeecCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EEecCCccccccchhHHHHHhcC-----CCCC
Confidence 466666554443221 122455678999999999999999998765 2211 111111 1111111111 0011
Q ss_pred ccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 449 ALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 449 ~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
+. ..=+..++||+..+..+...++.|..
T Consensus 77 p~-----~~v~~~CaSg~~Al~~A~~~I~sG~~ 104 (389)
T PRK07516 77 PA-----TRVENACATGSAAVYAALDAIEAGRA 104 (389)
T ss_pred ce-----eeeccccHHHHHHHHHHHHHHHCCCC
Confidence 11 11144688899999999999988743
No 386
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=48.64 E-value=53 Score=35.61 Aligned_cols=78 Identities=15% Similarity=0.063 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-ChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLG-DPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~g-D~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li 470 (829)
.+...++++++|+++|++++|||.+.. ++.++.. .+.-...+...++-. .++.- .+. ..+++|+..+.
T Consensus 53 ~~la~~A~~~al~~agl~~~~id~vi~-~~~~~~~~~~~~~~~i~~~lG~~-----~~~~~----~v~-~~Casg~~al~ 121 (319)
T PRK09352 53 SDLATEAAKKALEAAGIDPEDIDLIIV-ATTTPDYAFPSTACLVQARLGAK-----NAAAF----DLS-AACSGFVYALS 121 (319)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCchHHHHHHHHhCCC-----CCcEe----ecc-ccchhHHHHHH
Confidence 556678999999999999999998764 4444321 233333455555421 11111 122 35778888888
Q ss_pred HHHHHHhcCC
Q psy11396 471 KIILSLKHKV 480 (829)
Q Consensus 471 ~~~l~L~~~~ 480 (829)
.+...++.|.
T Consensus 122 ~A~~~i~~g~ 131 (319)
T PRK09352 122 TADQFIRSGA 131 (319)
T ss_pred HHHHHHHcCC
Confidence 8888888763
No 387
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=48.33 E-value=71 Score=34.72 Aligned_cols=80 Identities=10% Similarity=0.045 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHcCCC----CCCccEEEecCCCCCCCC----------------------hHHHHHHHHHhcccCCCC
Q psy11396 392 TKSQIRLQTKIYKKFNIN----PNDIQLLEAHGTGTKLGD----------------------PIEFEALCESFNKFSYHK 445 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~----~~dId~ve~hgtgt~~gD----------------------~~E~~Al~~~~~~~~~~~ 445 (829)
......+.++||+++|++ +++|+.|.. ++.+...+ +.=...+...++-
T Consensus 12 ~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----- 85 (332)
T cd00825 12 SILGFEAAERAIADAGLSREYQKNPIVGVVV-GTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI----- 85 (332)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCCEEEEE-EeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC-----
Confidence 445678999999999999 899998863 44332211 0001123333321
Q ss_pred CccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCCCC
Q psy11396 446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVLPP 483 (829)
Q Consensus 446 ~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ipp 483 (829)
......+ ...+++|+..+..+...|+.|..-.
T Consensus 86 -----~g~~~~v-~~~cas~~~al~~A~~~i~~g~~~~ 117 (332)
T cd00825 86 -----HGPAYDV-SAACAGSLHALSLAADAVQNGKQDI 117 (332)
T ss_pred -----CCCcccc-ccHhHHHHHHHHHHHHHHHcCCCCE
Confidence 1111112 2567778888888989999885433
No 388
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=47.93 E-value=35 Score=35.28 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEec---CCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHH
Q psy11396 395 QIRLQTKIYKKFNINPNDIQLLEAH---GTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471 (829)
Q Consensus 395 ~~~ai~~Al~~Agl~~~dId~ve~h---gtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~ 471 (829)
..+|+++||+++|++++||+++..- |..+|- .+..-+ +.+|- +-......+++...++|+.+|-.
T Consensus 104 ~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~Pg---lD~~l~-~~LgL--------~~~v~R~~i~~~GC~gg~~~L~~ 171 (226)
T PF00195_consen 104 AEEAARKALAEAGLDPSDITHLVTVSCTGIAAPG---LDARLI-NRLGL--------RPDVQRTPIFGMGCAGGAAGLRR 171 (226)
T ss_dssp HHHHHHHHHHHHTS-GGGECEEEEEESSSSECS----HHHHHH-HHHT----------TTSEEEEEES-GGGHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCcccceEEEEecCCcCCCc---hhHHHH-hcCCC--------CCCcEEEEEeccchhhHHHHHHH
Confidence 4678999999999999999996632 333333 333333 33341 11122234567777777777755
Q ss_pred HHHHHhc
Q psy11396 472 IILSLKH 478 (829)
Q Consensus 472 ~~l~L~~ 478 (829)
+..-.+.
T Consensus 172 A~~~~~~ 178 (226)
T PF00195_consen 172 AKDIARA 178 (226)
T ss_dssp HHHHHHH
T ss_pred HHHHHhC
Confidence 5544443
No 389
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=47.34 E-value=81 Score=35.73 Aligned_cols=78 Identities=12% Similarity=0.086 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCCh---HHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDP---IEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIG 468 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~---~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~ 468 (829)
.+-...+++++|+++|++|+|||.|.. |+.++.++. .-..+. ...+- . ..+|...+ +..++||+..
T Consensus 29 ~dLa~~A~~~al~~agi~p~~ID~vi~-G~~~~~~~~~~~~~r~a~-~~~Gl-~---~~~pa~~V-----n~aCaSg~~A 97 (402)
T PRK08242 29 VRLAAGLLEALRDRNGLDTAAVDDVVL-GCVTPVGDQGADIARTAV-LAAGL-P---ETVPGVQI-----NRFCASGLEA 97 (402)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEE-EecCCCccccccHHHHHH-HHcCC-C---CCCCeEEE-----cchhhhHHHH
Confidence 345577899999999999999999885 444443331 111111 11121 0 01221111 4568899999
Q ss_pred HHHHHHHHhcCC
Q psy11396 469 MIKIILSLKHKV 480 (829)
Q Consensus 469 li~~~l~L~~~~ 480 (829)
+..+..+++.|.
T Consensus 98 i~~A~~~I~sG~ 109 (402)
T PRK08242 98 VNLAAAKVRSGW 109 (402)
T ss_pred HHHHHHHHHcCC
Confidence 999999998875
No 390
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=47.28 E-value=82 Score=35.51 Aligned_cols=100 Identities=8% Similarity=0.023 Sum_probs=58.0
Q ss_pred EEEEEeeeecCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCccEEEe-cCCCCC-C-CChHHHHHHHHHhcccCCCC
Q psy11396 371 CIIKGWGVNQDGKTNGI--TAPNTKSQIRLQTKIYKKFNINPNDIQLLEA-HGTGTK-L-GDPIEFEALCESFNKFSYHK 445 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~-hgtgt~-~-gD~~E~~Al~~~~~~~~~~~ 445 (829)
+.|.|.+...-++..+. ..+..+-...+++++|+++|++++|||.+.. +...+. . +...-..++. .+.. .
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~---~gl~--~ 78 (390)
T PRK06504 4 AYIVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLA---SKLP--E 78 (390)
T ss_pred eEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHH---cCCC--C
Confidence 35667666555543221 1222455678999999999999999998776 332111 1 1111111121 1110 0
Q ss_pred CccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 446 ~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
.+|...+ +..++||+..+..+..+++.|..
T Consensus 79 -~vP~~tV-----~~~CaSG~~Ai~~A~~~I~sG~~ 108 (390)
T PRK06504 79 -SVPGTSI-----DRQCGSSQQALHFAAQAVMSGTM 108 (390)
T ss_pred -CCceEEE-----echhhHHHHHHHHHHHHHHCCCC
Confidence 1222222 55689999999999999999854
No 391
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=45.79 E-value=59 Score=36.31 Aligned_cols=76 Identities=7% Similarity=0.044 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC-CChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHH
Q psy11396 393 KSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKL-GDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471 (829)
Q Consensus 393 ~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~-gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~ 471 (829)
....+|+++||+++|++++|||.+.. ++.++. ..+.-+..+...++-. .+.- .+ ...+++|+..+..
T Consensus 97 ~la~~Aa~~aL~~agl~~~~Id~li~-~~~~~~~~~p~~a~~v~~~Lgl~------~~~~----~v-~~aCasg~~al~~ 164 (372)
T PRK07515 97 EMGVAAARQALARAGRTAEDIDAVIV-ACSNMQRAYPAMAIEIQQALGIE------GFAF----DM-NVACSSATFGIQT 164 (372)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhcCCC------CcEE----Ee-cchhHHHHHHHHH
Confidence 45577999999999999999998864 443332 1222233344444420 1111 11 2456777888888
Q ss_pred HHHHHhcCC
Q psy11396 472 IILSLKHKV 480 (829)
Q Consensus 472 ~~l~L~~~~ 480 (829)
+...++.|.
T Consensus 165 A~~~i~~g~ 173 (372)
T PRK07515 165 AANAIRSGS 173 (372)
T ss_pred HHHHHHcCC
Confidence 888887764
No 392
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=45.26 E-value=57 Score=36.95 Aligned_cols=98 Identities=9% Similarity=0.065 Sum_probs=53.9
Q ss_pred EEEEEeeeecCCCCCC-CCCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHH----H-HHHhcccCCC
Q psy11396 371 CIIKGWGVNQDGKTNG-ITAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEA----L-CESFNKFSYH 444 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~-~~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~A----l-~~~~~~~~~~ 444 (829)
+.|.|.+...-+++.. ...+..+-..+++++||++||++++|||.|.+ ++.+ .|....+. . .......
T Consensus 5 v~Ivg~~~t~~~r~~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~-g~~~--~~~~~~~~~~~~~~~~~~~~~--- 78 (403)
T PRK06289 5 VWVLGGYQSDFARNWTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHV-GNFF--GELFAGQGHLGAMPATVHPAL--- 78 (403)
T ss_pred EEEEeCCcCccccccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-Eecc--ccccccccccchHHHHHhhcC---
Confidence 3477777655444311 11223556688999999999999999998875 3322 22111000 0 0000000
Q ss_pred CCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 445 KNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 445 ~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
..++ ...=...+++|+..+..+..+++.|.
T Consensus 79 -~g~~-----~~~v~~~Casg~~al~~Aa~~I~sG~ 108 (403)
T PRK06289 79 -WGVP-----ASRHEAACASGSVATLAAMADLRAGR 108 (403)
T ss_pred -CCCc-----eeecccccHHHHHHHHHHHHHHHcCC
Confidence 0011 00002345888888999999998874
No 393
>PRK06840 hypothetical protein; Validated
Probab=43.07 E-value=72 Score=35.03 Aligned_cols=78 Identities=13% Similarity=-0.029 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC-CCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHH
Q psy11396 391 NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK-LGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGM 469 (829)
Q Consensus 391 ~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~-~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~l 469 (829)
..+...+|++++|+++|++|+|||++...++.++ ..-+.-..-+...++-. .++.-. +.+ .+++++..+
T Consensus 53 ~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-----~~~~~~----v~~-~C~~~~~al 122 (339)
T PRK06840 53 TSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-----NAWAFD----IMA-VCASFPIAL 122 (339)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-----Cccccc----ccc-cchHHHHHH
Confidence 3566788999999999999999999874333221 11111233355555521 111111 222 355566666
Q ss_pred HHHHHHHhc
Q psy11396 470 IKIILSLKH 478 (829)
Q Consensus 470 i~~~l~L~~ 478 (829)
..+...++.
T Consensus 123 ~~A~~~l~~ 131 (339)
T PRK06840 123 KVAKDLLYS 131 (339)
T ss_pred HHHHHHHhc
Confidence 666666665
No 394
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=42.82 E-value=68 Score=34.99 Aligned_cols=47 Identities=17% Similarity=0.062 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC-CCChHHHHHHHHHhc
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK-LGDPIEFEALCESFN 439 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~-~gD~~E~~Al~~~~~ 439 (829)
.+...+|.++||+++|++|+|||++.. +|.++ ..-+.-+.-+.+.++
T Consensus 53 ~~la~~Aa~~aL~~ag~~~~~Id~li~-~t~~~d~~~p~~a~~v~~~Lg 100 (326)
T PRK05963 53 SDLAASAGDMALSDAGIERSDIALTLL-ATSTPDHLLPPSAPLLAHRLG 100 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCCcHHHHHHHHhC
Confidence 556788999999999999999999874 45454 223444444665555
No 395
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=42.63 E-value=59 Score=36.47 Aligned_cols=78 Identities=12% Similarity=0.053 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHH
Q psy11396 391 NTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470 (829)
Q Consensus 391 ~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li 470 (829)
..+...+|+++||+++|++++|||++... +.+...-..-...+...++.. .++.-.+ ...+++|+..|.
T Consensus 96 ~~~La~~Aa~~aL~~agi~~~dId~li~~-s~~~~~~~~~a~~v~~~LG~~-----~~~~~dv-----~~~Ca~~~~aL~ 164 (379)
T PLN02326 96 LTSLAVEAAKKALEMAGVDPEDVDLVLLC-TSSPDDLFGSAPQVQAALGCT-----NALAFDL-----TAACSGFVLGLV 164 (379)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCccCcHHHHHHHHhCCC-----CCceeec-----cccchHHHHHHH
Confidence 35566889999999999999999988753 223211111123355555421 1221111 124566666676
Q ss_pred HHHHHHhcC
Q psy11396 471 KIILSLKHK 479 (829)
Q Consensus 471 ~~~l~L~~~ 479 (829)
.+...++.|
T Consensus 165 ~A~~~l~~g 173 (379)
T PLN02326 165 TAARFIRGG 173 (379)
T ss_pred HHHHHHHcC
Confidence 666667665
No 396
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=40.69 E-value=70 Score=36.14 Aligned_cols=79 Identities=4% Similarity=-0.079 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-ChHHHH-HHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLG-DPIEFE-ALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGM 469 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~g-D~~E~~-Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~l 469 (829)
.+....++++||++++++|+|||.|.+. +.++.. ...-.+ ++....+. ...|.-.+ ...+++|+..+
T Consensus 24 ~el~~~a~~~Al~~agl~p~dID~vi~g-~~~~~~~g~~~~~~~~~~~lg~-----~~~p~~~V-----~~~Casg~~al 92 (393)
T cd00826 24 HEAGAKAIAAALEPAGVAAGAVEEACLG-QVLGAGEGQNCAQQAAMHAGGL-----QEAPAIGM-----NNLCGSGLRAL 92 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-EccCCcccCcHHHHHHHHcCCC-----CCCcEEEe-----cchhHHHHHHH
Confidence 5566789999999999999999987643 222211 012122 22222221 11222111 35688899999
Q ss_pred HHHHHHHhcCCC
Q psy11396 470 IKIILSLKHKVL 481 (829)
Q Consensus 470 i~~~l~L~~~~i 481 (829)
..+...++.|..
T Consensus 93 ~~A~~~I~sG~~ 104 (393)
T cd00826 93 ALAMQLIAGGDA 104 (393)
T ss_pred HHHHHHHHCCCC
Confidence 999998888743
No 397
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=40.55 E-value=1.3e+02 Score=34.59 Aligned_cols=85 Identities=9% Similarity=-0.060 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCC--ccEEEec-CCCCCC---CChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhh
Q psy11396 392 TKSQIRLQTKIYKKFNINPND--IQLLEAH-GTGTKL---GDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAG 465 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~d--Id~ve~h-gtgt~~---gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG 465 (829)
.+-..+++++||+++|++++| ||.+.+. ..+... +......++..-+..........|...+ +..++||
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V-----~~~caSG 123 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRV-----EGACASG 123 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEE-----ECcCHHH
Confidence 445678999999999999999 9988652 211111 1111111111000000000011121111 4568999
Q ss_pred HHHHHHHHHHHhcCCC
Q psy11396 466 VIGMIKIILSLKHKVL 481 (829)
Q Consensus 466 ~~~li~~~l~L~~~~i 481 (829)
+..+..++.+++.|..
T Consensus 124 ~~Ai~~A~~~I~sG~~ 139 (438)
T PTZ00455 124 GLAVQSAWEALLAGTS 139 (438)
T ss_pred HHHHHHHHHHHHCCCC
Confidence 9999999999998743
No 398
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=39.91 E-value=1.3e+02 Score=34.12 Aligned_cols=100 Identities=6% Similarity=-0.065 Sum_probs=57.1
Q ss_pred EEEEeeeecCCCCCC-C-CCCCHHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCCCCC--hHHHHHHHHHhcccCCCCC
Q psy11396 372 IIKGWGVNQDGKTNG-I-TAPNTKSQIRLQTKIYKK-FNINPNDIQLLEAHGTGTKLGD--PIEFEALCESFNKFSYHKN 446 (829)
Q Consensus 372 ~I~g~~~~~dg~~~~-~-~~p~~~~~~~ai~~Al~~-Agl~~~dId~ve~hgtgt~~gD--~~E~~Al~~~~~~~~~~~~ 446 (829)
.|.|.+...-++..+ . ..+..+-...+++++|++ +|++|++||.|.+--+ ...++ ..-.+.+....+- ..
T Consensus 5 ~Ivg~~rTpfgk~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~-~~~~~~~~~~ar~~~~~~Gl----~~ 79 (401)
T PRK09050 5 FICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCA-NQAGEDNRNVARMSALLAGL----PV 79 (401)
T ss_pred EEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEec-cccccccchHHHHHHHHcCC----CC
Confidence 466666655554322 1 112244557899999995 7999999998776311 11122 1111111111110 01
Q ss_pred ccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 447 FCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 447 ~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
.+|...+ +..++||+..+..++..++.|..
T Consensus 80 ~vP~~tV-----~~aCaSG~~Ai~~A~~~I~sG~~ 109 (401)
T PRK09050 80 SVPGTTI-----NRLCGSGMDAVGTAARAIKAGEA 109 (401)
T ss_pred CCceEEE-----ecccccHHHHHHHHHHHHHCCCC
Confidence 1233222 56699999999999999998854
No 399
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=39.49 E-value=25 Score=41.01 Aligned_cols=107 Identities=13% Similarity=0.085 Sum_probs=58.5
Q ss_pred ccccCCCCEEEEecccccchhhhhhhccccccccccceeccccccccccCCCcceecccc-cc------CH-H--HHHHH
Q psy11396 645 MPLYCKIPVIAAMQGHAIGAGWAMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQ-RF------GK-I--LSREI 714 (829)
Q Consensus 645 ~~~~~~kp~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r-~i------G~-~--~a~e~ 714 (829)
.+..+..|+|..|-|.++|+|+..+... ....+..|+.|-..+|+.++.+....+.+ .+ |. . ...+.
T Consensus 362 a~~~~~vP~itvi~~~~~Gga~~am~~~---~~~~~~~~Awp~a~~~vm~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~ 438 (493)
T PF01039_consen 362 ALAEATVPKITVIVRKAYGGAYYAMCGR---GYGPDFVFAWPTAEIGVMGPEGAASILYRDELEAAEAEGADPEAQRAEK 438 (493)
T ss_dssp HHHHH-S-EEEEEEEEEEHHHHHHTTGG---GGTTSEEEEETT-EEESS-HHHHHHHHTHHHHHHSCHCCHSHHHHHHHH
T ss_pred HHHcCCCCEEEEEeCCccCcchhhhccc---ccchhhhhhhhcceeeecChhhhheeeehhhhhhhhcccchhHHHHHHH
Confidence 3344789999999999999887444333 11122334445555555443333222221 11 00 0 01111
Q ss_pred Hh--cCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhc
Q psy11396 715 LF--TASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSL 754 (829)
Q Consensus 715 ll--~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~ 754 (829)
+- .-+.-++..+...|++|.|+++.++.........-+..
T Consensus 439 ~~~~~~~~~~~~~~a~~~~~D~ii~p~~tR~~l~~~l~~~~~ 480 (493)
T PF01039_consen 439 IAEYEDELSSPYRAASRGYVDDIIDPAETRKVLIAALEMLWQ 480 (493)
T ss_dssp HHHHHHHHSSHHHHHHTTSSSEESSGGGHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHh
Confidence 11 11225789999999999999999988776666555443
No 400
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=39.48 E-value=1.6e+02 Score=33.24 Aligned_cols=100 Identities=9% Similarity=-0.040 Sum_probs=56.3
Q ss_pred EEEEEeeeecCCCC-CC-C-CCCCHHHHHHHHHHHHHHcCCCCCCccEEEecCCCCC-CCC-hHHHHHHHHHhcccCCCC
Q psy11396 371 CIIKGWGVNQDGKT-NG-I-TAPNTKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTK-LGD-PIEFEALCESFNKFSYHK 445 (829)
Q Consensus 371 a~I~g~~~~~dg~~-~~-~-~~p~~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~-~gD-~~E~~Al~~~~~~~~~~~ 445 (829)
..|.|.+...-+++ .+ + .....+-..+++++||+++|+.++|||.+.+. +.++ ..+ ..-..-+....|- .
T Consensus 4 v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g-~~~~~~~~g~~~a~~~~~~lGl----~ 78 (391)
T PRK07661 4 AVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIG-CAMPEAEQGLNMARNIGALAGL----P 78 (391)
T ss_pred EEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEE-eccccccccchHHHHHHHHcCC----C
Confidence 35677665554442 11 1 11224555789999999999888999988764 2221 111 1111112222220 0
Q ss_pred CccccCCcccCcCcchhhhhHHHHHHHHHHHhcCC
Q psy11396 446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKV 480 (829)
Q Consensus 446 ~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~ 480 (829)
..+|...+ +..++||+..+..+...++.|.
T Consensus 79 ~~~p~~~V-----~~aCaSG~~Al~~A~~~I~sG~ 108 (391)
T PRK07661 79 YTVPAITI-----NRYCSSGLQSIAYGAERIMLGH 108 (391)
T ss_pred CCcceeeh-----hhhhhHHHHHHHHHHHHHHcCC
Confidence 01233222 4578999999999999998874
No 401
>KOG2708|consensus
Probab=37.74 E-value=1.9e+02 Score=29.64 Aligned_cols=24 Identities=13% Similarity=0.218 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEe
Q psy11396 395 QIRLQTKIYKKFNINPNDIQLLEA 418 (829)
Q Consensus 395 ~~~ai~~Al~~Agl~~~dId~ve~ 418 (829)
....++.+|+.|+++++|||+|..
T Consensus 53 il~Lv~~al~ea~v~~~diD~icy 76 (336)
T KOG2708|consen 53 ILGLVKQALEEAGVTSDDIDCICY 76 (336)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEE
Confidence 456789999999999999999874
No 402
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=37.62 E-value=1.3e+02 Score=33.96 Aligned_cols=102 Identities=7% Similarity=-0.110 Sum_probs=57.8
Q ss_pred EEEEEeeeecCCCCCCC--CCCCHHHHHHHHHHHHHH-cCCCCCCccEEEec-CCCCCCCChHHHHHHHHHhcccCCCCC
Q psy11396 371 CIIKGWGVNQDGKTNGI--TAPNTKSQIRLQTKIYKK-FNINPNDIQLLEAH-GTGTKLGDPIEFEALCESFNKFSYHKN 446 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~--~~p~~~~~~~ai~~Al~~-Agl~~~dId~ve~h-gtgt~~gD~~E~~Al~~~~~~~~~~~~ 446 (829)
+.|.|.+...-++..+. ..+..+-...+++++|++ ++++|+|||.|.+- .......-..-.+.+....+- ..
T Consensus 3 v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl----~~ 78 (400)
T TIGR02430 3 AYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGL----PV 78 (400)
T ss_pred EEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC----CC
Confidence 35667666655543221 111245567899999995 79999999987763 222111001111112111221 00
Q ss_pred ccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 447 FCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 447 ~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
.+|...+ +..++||+..+..++..++.|..
T Consensus 79 ~~p~~~V-----~~~CaSG~~Ai~~a~~~I~sG~~ 108 (400)
T TIGR02430 79 SVPGTTV-----NRLCGSGLDAIGMAARAIKAGEA 108 (400)
T ss_pred CCceEEe-----echhhhHHHHHHHHHHHHHCCCC
Confidence 1222222 56699999999999999999854
No 403
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=37.30 E-value=54 Score=33.88 Aligned_cols=82 Identities=13% Similarity=0.018 Sum_probs=51.6
Q ss_pred CCCCEEEEecccccchhh-hhhhccccccccccceeccccccccccCCCcceeccccccCHHHHHHHHhcCCc--cCHHH
Q psy11396 649 CKIPVIAAMQGHAIGAGW-AMGLFCDYTIFSEESVYQSPYMRYGFTPGAGSTLIFPQRFGKILSREILFTASE--FKGKE 725 (829)
Q Consensus 649 ~~kp~Iaav~G~a~GgG~-~lal~cD~~ia~~~a~f~~~e~~~Gl~p~~g~~~~l~r~iG~~~a~e~ll~g~~--~~a~e 725 (829)
-.-|+|+.|-|.+++||| ...+.+|-+|+-+ ++.+-..+... ..++.+ ..-....++..+--. +..+-
T Consensus 104 ~GHpvI~Lv~G~A~SGaFLA~GlqA~rl~AL~-------ga~i~vM~~~s-~ARVTk-~~ve~Le~la~s~PvfA~gi~n 174 (234)
T PF06833_consen 104 AGHPVIGLVYGKAMSGAFLAHGLQANRLIALP-------GAMIHVMGKPS-AARVTK-RPVEELEELAKSVPVFAPGIEN 174 (234)
T ss_pred cCCCeEEEEecccccHHHHHHHHHhcchhcCC-------CCeeecCChHH-hHHHhh-cCHHHHHHHhhcCCCcCCCHHH
Confidence 677999999999999998 5788888877655 33333222221 112222 233444444433322 55677
Q ss_pred HHHcCCcccccChh
Q psy11396 726 LKERGISMPVLPRK 739 (829)
Q Consensus 726 A~~~GLv~~v~~~~ 739 (829)
-.++|.++++.+.+
T Consensus 175 y~~lG~l~~l~~~~ 188 (234)
T PF06833_consen 175 YAKLGALDELWDGD 188 (234)
T ss_pred HHHhccHHHHhccc
Confidence 88999999998743
No 404
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=36.25 E-value=1e+02 Score=33.68 Aligned_cols=79 Identities=14% Similarity=0.086 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCCC-ChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhH-HHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKLG-DPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGV-IGM 469 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~g-D~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~-~~l 469 (829)
..-..+|.++||++||++|+|||+|-+- |.|+-. -|.=+--+...+|-.. + ..+==.-++||. ..|
T Consensus 53 s~la~~Aa~~AL~~Agi~~~dIDlII~a-T~tpd~~~Ps~A~~vq~~LG~~~-----~------~afDl~aaCsgf~yaL 120 (323)
T COG0332 53 SDLAVEAARKALEDAGISPDDIDLIIVA-TSTPDHLFPSTACLVQARLGLGG-----A------PAFDLQAACSGFLYAL 120 (323)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-cCCcccCCChHHHHHHHHhCCCC-----c------ceeechhhhHHHHHHH
Confidence 4556789999999999999999999874 444322 1333333444444211 0 011122345554 445
Q ss_pred HHHHHHHhcCCCC
Q psy11396 470 IKIILSLKHKVLP 482 (829)
Q Consensus 470 i~~~l~L~~~~ip 482 (829)
-.+-..++.|...
T Consensus 121 ~~A~~~i~sG~~k 133 (323)
T COG0332 121 SVADGLIRSGGYK 133 (323)
T ss_pred HHHHHHHHcCCCC
Confidence 5555566776543
No 405
>PF10501 Ribosomal_L50: Ribosomal subunit 39S; InterPro: IPR018305 This entry represents the L50 protein from the mitochondrial 39S ribosomal subunit. L50 appears to be a secondary RNA-binding protein []. The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units []. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [].; GO: 0005739 mitochondrion
Probab=32.11 E-value=44 Score=30.41 Aligned_cols=75 Identities=9% Similarity=0.008 Sum_probs=46.7
Q ss_pred CCchhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCceecccccccccccc
Q psy11396 22 INNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDTISYDNSKKLKSKNL 101 (829)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t~~fd~pt~~a~~~~ 101 (829)
-|++++...+.+..++..+....-.. ..+..+. +.-|.|--.=-++.+||.+.+|..+|+.....-.|+..+..+
T Consensus 4 ~~~e~l~~~i~e~~~e~~~~~~~~~~----~~~~~~~-~~~l~D~~~KF~~lKrl~~~tGh~ipD~~L~~~~T~~dl~~~ 78 (112)
T PF10501_consen 4 SPPEDLEEIIEESAKEVLGAEGFGSQ----SWNNDWL-DISLEDLQLKFAFLKRLQQLTGHRIPDSKLHSIHTVGDLLNF 78 (112)
T ss_pred CCHHHHHHHHHHHHHHHhcccccccc----cCCcccc-ccccCCHHHHHHHHHHHHHHHCCCCCcHHHHhcCCHHHHHHH
Confidence 36777777776655554443222100 2334444 444533334458899999999999999988877777665544
No 406
>smart00250 PLEC Plectin repeat.
Probab=29.76 E-value=40 Score=24.04 Aligned_cols=19 Identities=26% Similarity=0.354 Sum_probs=17.3
Q ss_pred cCCccCHHHHHHcCCcccc
Q psy11396 717 TASEFKGKELKERGISMPV 735 (829)
Q Consensus 717 ~g~~~~a~eA~~~GLv~~v 735 (829)
+|+++|-.||.+.||++.-
T Consensus 18 t~~~lsv~eA~~~glid~~ 36 (38)
T smart00250 18 TGQKLSVEEALRRGLIDPE 36 (38)
T ss_pred CCCCcCHHHHHHcCCCCcc
Confidence 7899999999999999863
No 407
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=27.35 E-value=2.8e+02 Score=31.16 Aligned_cols=100 Identities=6% Similarity=-0.058 Sum_probs=54.5
Q ss_pred EEEEeeeecCCCCC--CCCCCC-HHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCCCCC--hHHHHHHHHHhcccCCCC
Q psy11396 372 IIKGWGVNQDGKTN--GITAPN-TKSQIRLQTKIYKK-FNINPNDIQLLEAHGTGTKLGD--PIEFEALCESFNKFSYHK 445 (829)
Q Consensus 372 ~I~g~~~~~dg~~~--~~~~p~-~~~~~~ai~~Al~~-Agl~~~dId~ve~hgtgt~~gD--~~E~~Al~~~~~~~~~~~ 445 (829)
.|.|.+...-+++. .+.... .+-...+++++|++ +|++|+|||.+.+- +....++ ..=...+....+- .
T Consensus 5 ~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g-~~~~~~~~g~~~ar~~~~~~Gl----~ 79 (387)
T PRK08947 5 VIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWG-CVQQTLEQGFNIARNAALLAGI----P 79 (387)
T ss_pred EEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEE-eccccccccccHHHHHHHHcCC----C
Confidence 46676655444321 111222 34456789999996 79999999987653 1111111 1101111111110 0
Q ss_pred CccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 446 NFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 446 ~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
..+|...+ +..++||+..+..+..+++.|..
T Consensus 80 ~~~p~~~V-----~~~caSG~~Ai~~A~~~I~sG~~ 110 (387)
T PRK08947 80 HSVPAVTV-----NRLCGSSMQALHDAARAIMTGDG 110 (387)
T ss_pred CCCcceee-----echhHHHHHHHHHHHHHHHCCCC
Confidence 01222222 45789999999999999988743
No 408
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=26.84 E-value=2.6e+02 Score=31.71 Aligned_cols=100 Identities=7% Similarity=-0.045 Sum_probs=56.3
Q ss_pred EEEEEeeeecCCCCCCCC--CCCHHHHHHHHHHHHHH-cCCCCCCccEEEec-CCCCCC--CChHHHHHHHHHhcccCCC
Q psy11396 371 CIIKGWGVNQDGKTNGIT--APNTKSQIRLQTKIYKK-FNINPNDIQLLEAH-GTGTKL--GDPIEFEALCESFNKFSYH 444 (829)
Q Consensus 371 a~I~g~~~~~dg~~~~~~--~p~~~~~~~ai~~Al~~-Agl~~~dId~ve~h-gtgt~~--gD~~E~~Al~~~~~~~~~~ 444 (829)
++|.|.+...-|+..+.. .+..+-...+++++|++ +|++|++||.|..- ...... .......++ ..+ .
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l--~~G-l--- 77 (400)
T PRK13359 4 AFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLL--LAG-L--- 77 (400)
T ss_pred EEEEeccCCCccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHH--HcC-C---
Confidence 356676665555432211 12234456799999996 69999999998863 211110 111211111 111 0
Q ss_pred CCccccCCcccCcCcchhhhhHHHHHHHHHHHhcCCC
Q psy11396 445 KNFCALGSVKSNIGHSATAAGVIGMIKIILSLKHKVL 481 (829)
Q Consensus 445 ~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~L~~~~i 481 (829)
...+|..++ +..++||+..+..+..+++.|..
T Consensus 78 ~~~vp~~tV-----~~~CaSG~~Av~~A~~~I~sG~~ 109 (400)
T PRK13359 78 PHGVPGSTI-----NRLCGSGMDAVGVAARAIKSGEA 109 (400)
T ss_pred CCCCceEEE-----eccchhHHHHHHHHHHHHHcCCC
Confidence 001222222 45689999999999999998854
No 409
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=26.05 E-value=29 Score=25.88 Aligned_cols=20 Identities=20% Similarity=0.144 Sum_probs=16.5
Q ss_pred hcCCccCHHHHHHcCCcccc
Q psy11396 716 FTASEFKGKELKERGISMPV 735 (829)
Q Consensus 716 l~g~~~~a~eA~~~GLv~~v 735 (829)
-+|++++-++|.+.||+|+-
T Consensus 17 ~tg~~lsv~~A~~~glId~~ 36 (45)
T PF00681_consen 17 ETGERLSVEEAIQRGLIDSD 36 (45)
T ss_dssp TTTEEEEHHHHHHTTSS-HH
T ss_pred CCCeEEcHHHHHHCCCcCHH
Confidence 46899999999999999964
No 410
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=25.99 E-value=1.5e+02 Score=32.30 Aligned_cols=69 Identities=10% Similarity=0.176 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHcCC-CCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHHH
Q psy11396 393 KSQIRLQTKIYKKFNI-NPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMIK 471 (829)
Q Consensus 393 ~~~~~ai~~Al~~Agl-~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~ 471 (829)
+..++++++|+.+||+ +|.|+-||+.-..--. ...|..+-. +...+.....-..+|.+-|||. ++++.
T Consensus 133 ~~vA~aV~~AM~~AGI~dpaDVH~VQvKcPlLt------~~~i~~A~~----RG~~~~t~dt~~SM~~SrgaSA-LGvAv 201 (366)
T TIGR02714 133 TETAAAVKRAMRDAGIADPADVHFVQVKCPLLT------IHTIRDAKS----RGKTVWTEDTYESMGYSRGASA-LGIAL 201 (366)
T ss_pred HHHHHHHHHHHHHcCCCChhHeeEEEecCcccC------HHHHHHHHh----cCCceeecCcccccccccchhH-HHHHH
Confidence 4567899999999999 7999999998743221 112222211 1223444444445688888884 44444
Q ss_pred H
Q psy11396 472 I 472 (829)
Q Consensus 472 ~ 472 (829)
+
T Consensus 202 A 202 (366)
T TIGR02714 202 A 202 (366)
T ss_pred H
Confidence 3
No 411
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=25.99 E-value=1.3e+02 Score=32.50 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEe---cCCCCCCCC
Q psy11396 395 QIRLQTKIYKKFNINPNDIQLLEA---HGTGTKLGD 427 (829)
Q Consensus 395 ~~~ai~~Al~~Agl~~~dId~ve~---hgtgt~~gD 427 (829)
..++.++||+.+++.|+|||.|.. -|..|+.-|
T Consensus 80 ~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~d 115 (356)
T COG3424 80 GVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLD 115 (356)
T ss_pred HHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChh
Confidence 367899999999999999998664 344555444
No 412
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=25.64 E-value=3.2e+02 Score=30.73 Aligned_cols=82 Identities=6% Similarity=0.008 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHH-cCCCCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHH
Q psy11396 392 TKSQIRLQTKIYKK-FNINPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470 (829)
Q Consensus 392 ~~~~~~ai~~Al~~-Agl~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li 470 (829)
.+-...+++++|++ +|++|+|||.+.+--.. ..++. ...+.+.......-...+|...+ +..++||+..+.
T Consensus 26 ~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~-~~~~~--g~~~ar~~~~~~g~~~~~p~~tV-----~~~CaSG~~Ai~ 97 (385)
T TIGR02445 26 EDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQ-QTLEQ--GFNIARNAALLAQIPHTSAAVTV-----NRLCGSSMQALH 97 (385)
T ss_pred HHHHHHHHHHHHHhccCCCHHHcCEEEEeccc-ccccc--cchHHHHHHHHCCCCCCcchhhh-----hhhhHHHHHHHH
Confidence 45567899999996 59999999987663221 11110 00111111100000111222222 467899999999
Q ss_pred HHHHHHhcCCC
Q psy11396 471 KIILSLKHKVL 481 (829)
Q Consensus 471 ~~~l~L~~~~i 481 (829)
.+..+++.|..
T Consensus 98 ~Aa~~I~sG~~ 108 (385)
T TIGR02445 98 DAARAIMTGDA 108 (385)
T ss_pred HHHHHHHCCCC
Confidence 99999988743
No 413
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=25.40 E-value=1.2e+02 Score=31.50 Aligned_cols=129 Identities=11% Similarity=0.143 Sum_probs=71.4
Q ss_pred hHhHHHHHhhhH--HhhhhccCC-------CCCCCcCCCccccccccccc-ccHHHHHHHHhhhcCc--cccCceecccc
Q psy11396 26 DIDKSIKKNNSK--IINDTISYD-------NSKKLKSKNLSINNDDFDKS-INNDDIDKSIKKNNSK--IINDTISYDNS 93 (829)
Q Consensus 26 ~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~gf~~s-l~~~~l~~~l~~~~g~--~l~~t~~fd~p 93 (829)
.+.+.|++++.. +|+-|.|-. ... -+-++.+...+|..-. +.|.-|++.|+. .|+ ++-..+ ..|
T Consensus 32 ~~a~~i~~~~~~g~eV~iVvGGGni~Rg~~~~~-~g~~r~~~D~mGmlaTvmNal~L~~aL~~-~~~~~~v~sai--~~~ 107 (238)
T COG0528 32 RIANEIKELVDLGVEVAVVVGGGNIARGYIGAA-AGMDRVTADYMGMLATVMNALALQDALER-LGVDTRVQSAI--AMP 107 (238)
T ss_pred HHHHHHHHHHhcCcEEEEEECCCHHHHhHHHHH-cCCchhhhhHHHHHHHHHHHHHHHHHHHh-cCCcceecccc--cCc
Confidence 345566677654 788887742 222 3788888877787222 456677777775 222 111111 111
Q ss_pred ccccccccccCCCcCccCCCCCCEEEEecccccCC-CCCHHHHHHHHHcCCCceeeCCCCCCcccccCCcccc
Q psy11396 94 KKLKSKNLSINNDDFDKSINNDDIAIIGISGQFPK-ANNVKKFWNNLLIGRNCVSKIPSTRWIIDDFYDSDKN 165 (829)
Q Consensus 94 t~~a~~~~~~~~~~~~~~~~~~~IaItG~g~~~p~-g~~~~~~w~~l~~G~~~~~~~~~~r~~~~~~~~~~~~ 165 (829)
....... ..++-......+|+|.|-|.-.|+ ..|...-..+..-+.+.+-.... ..+..|+.||.
T Consensus 108 ~~~e~~~----~~~A~~~l~~grVvIf~gGtg~P~fTTDt~AALrA~ei~ad~ll~atn---~VDGVY~~DPk 173 (238)
T COG0528 108 QVAEPYS----RREAIRHLEKGRVVIFGGGTGNPGFTTDTAAALRAEEIEADVLLKATN---KVDGVYDADPK 173 (238)
T ss_pred cccCccC----HHHHHHHHHcCCEEEEeCCCCCCCCchHHHHHHHHHHhCCcEEEEecc---CCCceeCCCCC
Confidence 1011110 011112345679999999999998 44554544555566665555431 24677887775
No 414
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=23.87 E-value=1.8e+02 Score=31.82 Aligned_cols=71 Identities=11% Similarity=0.145 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHcCC-CCCCccEEEecCCCCCCCChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHHHHH
Q psy11396 392 TKSQIRLQTKIYKKFNI-NPNDIQLLEAHGTGTKLGDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVIGMI 470 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl-~~~dId~ve~hgtgt~~gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li 470 (829)
.+..++++++|+.+||+ +|.||-||..-..=- -.+.|..+.. +...+.....-..+|.+-||| .++++
T Consensus 131 V~~vA~aV~~aM~~AGI~dpaDVH~VQvKcPLL------T~~~i~~A~~----RG~~~~t~dt~~SM~~SrgAS-ALGvA 199 (365)
T PF09663_consen 131 VEEVAAAVRAAMADAGITDPADVHFVQVKCPLL------TSERIADAKA----RGKTVATEDTYESMAYSRGAS-ALGVA 199 (365)
T ss_pred HHHHHHHHHHHHHHcCCCChhheeeEEecCCcC------CHHHHHHHHh----CCCceeecccccccccccchh-HHHHH
Confidence 45568899999999999 799999999763311 1222333222 122234444445568888887 44555
Q ss_pred HHH
Q psy11396 471 KII 473 (829)
Q Consensus 471 ~~~ 473 (829)
.++
T Consensus 200 vAL 202 (365)
T PF09663_consen 200 VAL 202 (365)
T ss_pred HHh
Confidence 443
No 415
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=23.47 E-value=86 Score=34.91 Aligned_cols=29 Identities=17% Similarity=0.368 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecC
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHG 420 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hg 420 (829)
+....+++++.++++++++++||+|-+||
T Consensus 70 g~~~a~av~~~~~~~~l~~~~id~IgsHG 98 (365)
T PRK09585 70 GRLFAEAVNALLAEAGLSPEDIDAIGSHG 98 (365)
T ss_pred HHHHHHHHHHHHHHcCCCccCccEEEeCC
Confidence 34568899999999999999999999997
No 416
>PF07377 DUF1493: Protein of unknown function (DUF1493); InterPro: IPR010862 This family consists of several bacterial proteins of around 115 residues in length. Members of this family are largely found in Salmonella and Yersinia species and several have been described as being putative cytoplasmic proteins. The function of this family is unknown.
Probab=22.20 E-value=1.1e+02 Score=27.66 Aligned_cols=61 Identities=10% Similarity=0.101 Sum_probs=51.4
Q ss_pred hhHhHHHHHhhhHHhhhhccCCCCCCCcCCCcccccccccccccHHHHHHHHhhhcCccccCc
Q psy11396 25 DDIDKSIKKNNSKIINDTISYDNSKKLKSKNLSINNDDFDKSINNDDIDKSIKKNNSKIINDT 87 (829)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~sl~~~~l~~~l~~~~g~~l~~t 87 (829)
+++.+.+.++++++.+..+-- ....|.++.....|||+ +.-.+.||-+.+....++.+..-
T Consensus 2 ~~i~~~I~~fi~~~~~~~~~~-~~~~it~dt~L~~DL~~-~~dda~elm~~f~~~F~Vd~~~f 62 (111)
T PF07377_consen 2 DDIEQEIIEFIREENGPYLFF-KKKPITPDTDLQEDLGL-DGDDAEELMEDFFERFNVDLSDF 62 (111)
T ss_pred chHHHHHHHHHHHHcCccccc-CcccCCCCCcHHHhcCC-CHHHHHHHHHHHHHHhCCCcCcc
Confidence 567889999999999874332 56789999999779999 99999999999999999987663
No 417
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=22.08 E-value=1.5e+02 Score=34.57 Aligned_cols=127 Identities=14% Similarity=0.040 Sum_probs=69.0
Q ss_pred CeeeccCChhhhhhhhcccccccccccccccccCCCCEEEEecccccchhhhh----hhccccccccccceecccccccc
Q psy11396 616 NYFACGGTKEGLLKIQKGISRFTDEKSYCMPLYCKIPVIAAMQGHAIGAGWAM----GLFCDYTIFSEESVYQSPYMRYG 691 (829)
Q Consensus 616 ~~F~~G~D~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~Iaav~G~a~GgG~~l----al~cD~~ia~~~a~f~~~e~~~G 691 (829)
+.|..|-+...-.-... -.+++.......+|.|..|.|.++|||+.. ++.+|+.++.++++ ++
T Consensus 369 pGFm~G~~~E~~giik~------Gakl~~A~aeatVPkitvI~rkayGga~~~M~~~~~~~~~~~AwP~a~-------ia 435 (526)
T COG4799 369 PGFMPGTDQEYGGIIKH------GAKLLYAVAEATVPKITVITRKAYGGAYYVMGGKALGPDFNYAWPTAE-------IA 435 (526)
T ss_pred CCCCCChhHHhChHHHh------hhHHHhhHhhccCCeEEEEecccccceeeeecCccCCCceeEecCcce-------ee
Confidence 45777777543211111 122333444478888888999999999754 44566665555554 44
Q ss_pred ccCCCcceecccc-ccC---HHHH--------HHHHhcCCccCHHHHHHcCCcccccChhhHHHHHHHHHHHHhcC
Q psy11396 692 FTPGAGSTLIFPQ-RFG---KILS--------REILFTASEFKGKELKERGISMPVLPRKQVLFYSLKLAKKLSLL 755 (829)
Q Consensus 692 l~p~~g~~~~l~r-~iG---~~~a--------~e~ll~g~~~~a~eA~~~GLv~~v~~~~~l~~~~~~~a~~i~~~ 755 (829)
+.=+.++...+.+ .+. .... ..--+.-+...+--|.+.|++|.|.++.+.......-...+...
T Consensus 436 VMG~egAv~i~~~k~l~~~~~~~~~~~~~~~~~~~eY~~~~~~p~~aa~r~~iD~vI~p~~tR~~L~~~l~~~~~k 511 (526)
T COG4799 436 VMGPEGAVSILYRKELAAAERPEEREALLRKQLIAEYEEQFSNPYYAAERGYIDAVIDPADTRAVLGRALSALANK 511 (526)
T ss_pred ecCHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHHHhccchHHHHHhCCCCcccCHHHHHHHHHHHHHHHhcC
Confidence 3222222222221 111 0000 01111222245667888999999999888777666655555544
No 418
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=20.33 E-value=4.8e+02 Score=29.71 Aligned_cols=78 Identities=10% Similarity=0.098 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEecCCCCCC----CChHHHHHHHHHhcccCCCCCccccCCcccCcCcchhhhhHH
Q psy11396 392 TKSQIRLQTKIYKKFNINPNDIQLLEAHGTGTKL----GDPIEFEALCESFNKFSYHKNFCALGSVKSNIGHSATAAGVI 467 (829)
Q Consensus 392 ~~~~~~ai~~Al~~Agl~~~dId~ve~hgtgt~~----gD~~E~~Al~~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~ 467 (829)
.+-...++++++++++++|++||.|.. |+..+. +.+.-..+|.. + +|.......+ .-.++||+-
T Consensus 30 ~~L~~~~~~~~l~r~~i~~~~id~vi~-G~~~~~g~~g~n~aR~~al~a---g-------lp~~vp~~tv-nr~C~Sgl~ 97 (417)
T PRK06025 30 QHLAATVLKALAERNGLNTADVDDIIW-STSSQRGKQGGDLGRMAALDA---G-------YDIKASGVTL-DRFCGGGIT 97 (417)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCCEEEE-EcCCCcCcccCcHHHHHHHhC---C-------CCCCCCeeee-ccccchHHH
Confidence 334467899999999999999998776 333332 23333333321 1 1111111111 457899999
Q ss_pred HHHHHHHHHhcCCC
Q psy11396 468 GMIKIILSLKHKVL 481 (829)
Q Consensus 468 ~li~~~l~L~~~~i 481 (829)
.+..+..+++-|..
T Consensus 98 ai~~aa~~I~~G~~ 111 (417)
T PRK06025 98 SVNLAAAQIMSGME 111 (417)
T ss_pred HHHHHHHHHHcCCC
Confidence 99999999988754
Done!