Query psy11398
Match_columns 336
No_of_seqs 202 out of 1971
Neff 7.1
Searched_HMMs 46136
Date Fri Aug 16 17:24:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11398.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11398hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372|consensus 100.0 2E-76 4.4E-81 527.6 15.7 276 15-324 2-286 (303)
2 KOG0373|consensus 100.0 8.1E-70 1.8E-74 478.6 15.9 272 13-317 3-274 (306)
3 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 2.6E-67 5.7E-72 494.9 23.6 270 15-318 1-270 (285)
4 PTZ00480 serine/threonine-prot 100.0 3.3E-67 7.1E-72 499.0 24.3 274 10-317 5-286 (320)
5 cd07420 MPP_RdgC Drosophila me 100.0 3.9E-67 8.4E-72 499.1 24.5 270 15-318 6-309 (321)
6 PTZ00239 serine/threonine prot 100.0 7.2E-67 1.6E-71 494.9 24.7 279 15-326 2-289 (303)
7 KOG0374|consensus 100.0 2.2E-66 4.8E-71 494.9 21.0 273 12-317 5-288 (331)
8 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 6E-66 1.3E-70 487.4 22.7 269 16-318 2-278 (293)
9 PTZ00244 serine/threonine-prot 100.0 1.4E-65 3.1E-70 484.5 23.5 269 16-318 4-280 (294)
10 cd07416 MPP_PP2B PP2B, metallo 100.0 3.1E-65 6.8E-70 485.3 25.8 278 15-326 2-300 (305)
11 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.7E-64 3.6E-69 481.6 23.8 268 15-317 15-288 (316)
12 smart00156 PP2Ac Protein phosp 100.0 4.9E-64 1.1E-68 470.4 22.9 256 29-318 1-256 (271)
13 cd07418 MPP_PP7 PP7, metalloph 100.0 2.4E-61 5.3E-66 466.1 25.1 298 16-320 12-352 (377)
14 cd07419 MPP_Bsu1_C Arabidopsis 100.0 6.6E-61 1.4E-65 457.2 22.7 258 28-318 20-298 (311)
15 KOG0371|consensus 100.0 8.4E-62 1.8E-66 436.4 13.2 285 8-326 12-305 (319)
16 KOG0375|consensus 100.0 8.5E-61 1.8E-65 446.1 14.6 282 11-326 43-345 (517)
17 KOG0377|consensus 100.0 2.6E-55 5.6E-60 417.8 12.3 300 13-325 118-425 (631)
18 KOG0376|consensus 100.0 2.9E-44 6.4E-49 348.8 11.8 270 16-319 170-444 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.1E-33 2.3E-38 257.0 18.1 212 59-314 1-221 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 99.9 1.3E-26 2.9E-31 214.6 13.6 122 56-179 1-145 (245)
21 cd07425 MPP_Shelphs Shewanella 99.9 3.8E-25 8.3E-30 200.1 14.8 178 59-304 1-198 (208)
22 cd07423 MPP_PrpE Bacillus subt 99.9 1.8E-24 4E-29 198.8 13.8 121 56-179 1-142 (234)
23 PRK00166 apaH diadenosine tetr 99.9 2.6E-23 5.6E-28 195.3 13.6 120 56-179 1-126 (275)
24 cd07413 MPP_PA3087 Pseudomonas 99.9 6.6E-23 1.4E-27 187.2 14.5 118 59-179 2-145 (222)
25 cd07422 MPP_ApaH Escherichia c 99.9 2.4E-23 5.3E-28 193.6 10.8 118 58-179 1-124 (257)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 5.6E-23 1.2E-27 192.0 10.3 120 56-179 1-126 (279)
27 PRK11439 pphA serine/threonine 99.9 8E-23 1.7E-27 186.1 10.5 117 56-178 17-147 (218)
28 cd07424 MPP_PrpA_PrpB PrpA and 99.9 7.3E-22 1.6E-26 178.2 12.7 118 56-179 1-132 (207)
29 PHA02239 putative protein phos 99.9 4.2E-21 9E-26 176.7 12.6 122 56-179 1-168 (235)
30 cd07421 MPP_Rhilphs Rhilph pho 99.8 1.2E-20 2.5E-25 176.9 12.7 74 56-129 2-82 (304)
31 PRK09968 serine/threonine-spec 99.8 3.6E-20 7.7E-25 168.8 12.0 116 56-177 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.2 2.1E-11 4.6E-16 101.6 7.8 75 56-130 1-81 (200)
33 cd00841 MPP_YfcE Escherichia c 99.1 1.9E-09 4.2E-14 92.2 13.3 59 57-127 1-59 (155)
34 TIGR00040 yfcE phosphoesterase 99.0 2.1E-09 4.6E-14 92.6 10.2 62 56-126 1-63 (158)
35 PRK09453 phosphodiesterase; Pr 99.0 8.8E-10 1.9E-14 97.4 6.4 68 56-127 1-76 (182)
36 PF12850 Metallophos_2: Calcin 98.9 5.6E-09 1.2E-13 88.6 10.2 61 56-128 1-61 (156)
37 cd07397 MPP_DevT Myxococcus xa 98.9 9.3E-09 2E-13 94.7 11.5 113 57-179 2-160 (238)
38 COG0639 ApaH Diadenosine tetra 98.9 3.1E-09 6.7E-14 88.4 6.8 144 129-306 3-154 (155)
39 cd07379 MPP_239FB Homo sapiens 98.8 4.2E-08 9.1E-13 82.3 11.1 60 57-126 1-62 (135)
40 cd07388 MPP_Tt1561 Thermus the 98.7 5E-08 1.1E-12 89.3 7.3 70 56-126 5-74 (224)
41 cd00838 MPP_superfamily metall 98.6 2.7E-07 5.8E-12 74.5 10.0 67 59-125 1-69 (131)
42 cd07394 MPP_Vps29 Homo sapiens 98.5 7.2E-07 1.6E-11 78.8 10.3 58 57-126 1-64 (178)
43 cd07392 MPP_PAE1087 Pyrobaculu 98.4 5.1E-07 1.1E-11 78.9 5.9 64 58-127 1-65 (188)
44 cd07400 MPP_YydB Bacillus subt 98.3 1E-05 2.2E-10 68.1 11.8 68 58-126 1-80 (144)
45 cd07403 MPP_TTHA0053 Thermus t 98.3 6.9E-06 1.5E-10 68.7 10.1 56 59-125 1-56 (129)
46 cd07385 MPP_YkuE_C Bacillus su 98.2 1.6E-06 3.5E-11 78.3 5.9 70 56-127 2-76 (223)
47 PRK11340 phosphodiesterase Yae 98.2 2.8E-06 6.2E-11 79.9 6.8 69 56-126 50-124 (271)
48 cd07404 MPP_MS158 Microscilla 98.2 1.3E-06 2.9E-11 75.6 3.4 67 58-127 1-68 (166)
49 PRK05340 UDP-2,3-diacylglucosa 98.1 7.4E-06 1.6E-10 75.6 6.2 69 56-126 1-82 (241)
50 COG0622 Predicted phosphoester 98.0 3.8E-05 8.2E-10 67.6 9.4 64 56-127 2-65 (172)
51 TIGR03729 acc_ester putative p 97.9 1.6E-05 3.5E-10 73.1 6.4 68 57-127 1-74 (239)
52 cd07399 MPP_YvnB Bacillus subt 97.9 0.0002 4.4E-09 65.0 13.2 68 57-126 2-81 (214)
53 cd07383 MPP_Dcr2 Saccharomyces 97.8 0.00026 5.6E-09 63.2 12.2 70 56-125 3-87 (199)
54 TIGR00619 sbcd exonuclease Sbc 97.8 4.1E-05 8.8E-10 71.4 7.2 72 56-127 1-88 (253)
55 cd07395 MPP_CSTP1 Homo sapiens 97.8 0.00057 1.2E-08 63.5 14.4 71 57-127 6-99 (262)
56 KOG0376|consensus 97.8 1.8E-06 3.9E-11 85.5 -2.7 260 27-307 13-299 (476)
57 cd07396 MPP_Nbla03831 Homo sap 97.8 6.4E-05 1.4E-09 70.4 7.2 72 57-128 2-87 (267)
58 PRK04036 DNA polymerase II sma 97.8 8.7E-05 1.9E-09 75.9 8.4 114 55-176 243-388 (504)
59 PHA02546 47 endonuclease subun 97.7 6.3E-05 1.4E-09 73.1 6.9 72 56-127 1-89 (340)
60 cd07390 MPP_AQ1575 Aquifex aeo 97.7 8.3E-05 1.8E-09 64.8 6.6 66 58-128 1-83 (168)
61 TIGR01854 lipid_A_lpxH UDP-2,3 97.6 8.9E-05 1.9E-09 68.0 5.9 67 58-126 1-80 (231)
62 cd07402 MPP_GpdQ Enterobacter 97.6 0.00016 3.5E-09 65.9 7.4 66 57-126 1-82 (240)
63 cd07391 MPP_PF1019 Pyrococcus 97.6 0.00023 5E-09 62.2 7.8 56 71-127 30-88 (172)
64 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.6 0.00014 3.1E-09 68.2 6.5 68 58-126 1-85 (262)
65 cd00840 MPP_Mre11_N Mre11 nucl 97.5 0.00016 3.4E-09 64.9 6.2 72 57-129 1-91 (223)
66 cd07398 MPP_YbbF-LpxH Escheric 97.5 0.00022 4.7E-09 64.0 6.2 68 59-127 1-82 (217)
67 PRK11148 cyclic 3',5'-adenosin 97.4 0.00029 6.3E-09 66.2 6.7 70 55-126 14-97 (275)
68 cd08165 MPP_MPPE1 human MPPE1 97.4 0.00028 6E-09 61.0 5.1 47 81-127 37-89 (156)
69 TIGR00583 mre11 DNA repair pro 97.3 0.0006 1.3E-08 67.8 7.5 54 55-108 3-68 (405)
70 TIGR00024 SbcD_rel_arch putati 97.3 0.00062 1.4E-08 62.4 7.1 69 56-128 15-103 (225)
71 COG1409 Icc Predicted phosphoh 97.2 0.00095 2.1E-08 62.0 7.7 73 56-130 1-81 (301)
72 cd07393 MPP_DR1119 Deinococcus 97.2 0.00062 1.4E-08 62.5 6.2 65 58-126 1-83 (232)
73 PRK10966 exonuclease subunit S 97.2 0.00064 1.4E-08 67.8 5.9 71 56-127 1-87 (407)
74 cd00839 MPP_PAPs purple acid p 97.0 0.00064 1.4E-08 64.0 4.4 70 56-129 5-83 (294)
75 cd07386 MPP_DNA_pol_II_small_a 97.0 0.00081 1.8E-08 62.0 5.0 68 59-128 2-95 (243)
76 cd07401 MPP_TMEM62_N Homo sapi 97.0 0.0016 3.5E-08 60.7 6.5 70 58-127 2-89 (256)
77 COG2129 Predicted phosphoester 96.9 0.0017 3.7E-08 59.0 5.8 72 55-127 3-77 (226)
78 COG2908 Uncharacterized protei 96.9 0.0049 1.1E-07 56.6 8.2 185 59-289 1-204 (237)
79 COG1408 Predicted phosphohydro 96.9 0.0018 3.9E-08 61.5 5.7 70 56-127 45-118 (284)
80 cd08166 MPP_Cdc1_like_1 unchar 96.6 0.0084 1.8E-07 53.8 7.7 47 81-127 41-93 (195)
81 COG1407 Predicted ICC-like pho 96.5 0.0082 1.8E-07 55.2 7.1 102 54-179 18-141 (235)
82 COG4186 Predicted phosphoester 96.5 0.008 1.7E-07 51.8 6.4 70 57-130 5-89 (186)
83 cd07384 MPP_Cdc1_like Saccharo 96.4 0.0051 1.1E-07 53.9 5.3 49 79-127 42-100 (171)
84 COG0420 SbcD DNA repair exonuc 96.3 0.0089 1.9E-07 59.0 7.0 73 56-128 1-89 (390)
85 PF14582 Metallophos_3: Metall 96.3 0.003 6.6E-08 57.6 3.2 71 55-126 5-101 (255)
86 cd00845 MPP_UshA_N_like Escher 96.2 0.0077 1.7E-07 55.4 5.5 65 57-126 2-81 (252)
87 cd07380 MPP_CWF19_N Schizosacc 96.2 0.0097 2.1E-07 51.2 5.6 66 59-125 1-68 (150)
88 cd08163 MPP_Cdc1 Saccharomyces 96.2 0.079 1.7E-06 49.6 12.1 25 258-282 202-226 (257)
89 PLN02533 probable purple acid 95.7 0.012 2.7E-07 59.0 4.8 70 56-128 140-212 (427)
90 cd08164 MPP_Ted1 Saccharomyces 95.6 0.022 4.8E-07 51.0 5.4 65 62-126 23-110 (193)
91 cd07410 MPP_CpdB_N Escherichia 95.5 0.018 4E-07 54.0 4.9 65 57-126 2-94 (277)
92 PF08321 PPP5: PPP5 TPR repeat 95.4 0.03 6.5E-07 44.5 4.9 39 16-54 57-95 (95)
93 PF06874 FBPase_2: Firmicute f 95.3 0.018 3.8E-07 59.5 4.2 40 260-299 507-552 (640)
94 cd07378 MPP_ACP5 Homo sapiens 94.9 0.059 1.3E-06 50.2 6.1 69 57-127 2-83 (277)
95 KOG3325|consensus 94.7 0.21 4.5E-06 42.9 8.2 60 58-126 3-65 (183)
96 cd07408 MPP_SA0022_N Staphyloc 94.3 0.077 1.7E-06 49.3 5.4 65 57-126 2-81 (257)
97 cd07412 MPP_YhcR_N Bacillus su 93.7 0.066 1.4E-06 50.8 3.9 65 57-126 2-87 (288)
98 COG1311 HYS2 Archaeal DNA poly 93.1 0.96 2.1E-05 45.7 10.9 78 57-134 227-328 (481)
99 KOG3662|consensus 92.6 0.2 4.3E-06 49.7 5.4 70 57-126 50-143 (410)
100 cd07411 MPP_SoxB_N Thermus the 91.5 0.29 6.2E-06 45.7 4.9 64 57-126 2-94 (264)
101 cd07409 MPP_CD73_N CD73 ecto-5 91.3 0.42 9.1E-06 45.1 5.8 65 57-126 2-93 (281)
102 KOG2863|consensus 90.3 0.35 7.6E-06 47.0 4.2 73 56-128 1-89 (456)
103 cd00842 MPP_ASMase acid sphing 89.9 0.48 1E-05 44.7 4.9 72 58-129 40-124 (296)
104 COG1768 Predicted phosphohydro 89.5 0.14 3E-06 45.3 0.8 42 82-127 43-86 (230)
105 TIGR00282 metallophosphoestera 88.6 0.82 1.8E-05 43.1 5.3 67 56-127 1-71 (266)
106 KOG1432|consensus 88.4 1.6 3.4E-05 42.4 7.1 71 57-128 55-148 (379)
107 PRK09419 bifunctional 2',3'-cy 88.0 0.61 1.3E-05 52.7 4.7 66 56-126 661-735 (1163)
108 PF04042 DNA_pol_E_B: DNA poly 87.6 0.87 1.9E-05 40.6 4.7 72 58-129 1-93 (209)
109 cd07406 MPP_CG11883_N Drosophi 87.1 1.1 2.3E-05 41.8 5.1 56 66-126 21-82 (257)
110 cd07405 MPP_UshA_N Escherichia 85.9 0.97 2.1E-05 42.8 4.2 65 57-126 2-86 (285)
111 cd07382 MPP_DR1281 Deinococcus 82.8 2.6 5.6E-05 39.4 5.5 65 57-126 1-69 (255)
112 KOG2476|consensus 81.5 3 6.4E-05 42.0 5.6 69 55-124 5-75 (528)
113 COG0737 UshA 5'-nucleotidase/2 77.5 2.9 6.3E-05 42.9 4.4 67 55-126 26-114 (517)
114 PTZ00422 glideosome-associated 77.2 3.8 8.3E-05 40.7 4.9 69 56-126 27-108 (394)
115 PTZ00235 DNA polymerase epsilo 76.4 8.3 0.00018 36.8 6.7 72 56-127 28-122 (291)
116 cd07407 MPP_YHR202W_N Saccharo 75.9 3.6 7.8E-05 39.0 4.2 65 57-126 7-96 (282)
117 cd08162 MPP_PhoA_N Synechococc 74.6 5 0.00011 38.6 4.9 65 57-126 2-90 (313)
118 PRK09419 bifunctional 2',3'-cy 72.6 4.4 9.5E-05 45.9 4.5 66 56-126 42-138 (1163)
119 PRK09420 cpdB bifunctional 2', 71.1 5.4 0.00012 42.3 4.6 68 54-126 24-121 (649)
120 TIGR01390 CycNucDiestase 2',3' 70.2 5.5 0.00012 42.1 4.4 66 56-126 3-98 (626)
121 KOG1378|consensus 69.7 5 0.00011 40.4 3.7 72 55-130 147-224 (452)
122 cd07387 MPP_PolD2_C PolD2 (DNA 67.2 14 0.00029 34.7 5.9 32 275-307 206-238 (257)
123 PRK09558 ushA bifunctional UDP 66.2 7.2 0.00016 40.4 4.2 67 55-126 34-120 (551)
124 PRK11907 bifunctional 2',3'-cy 65.7 12 0.00026 40.8 5.9 67 55-126 115-212 (814)
125 KOG2310|consensus 63.9 17 0.00037 37.6 6.1 54 55-108 13-78 (646)
126 COG3855 Fbp Uncharacterized pr 62.3 5.1 0.00011 40.4 2.1 40 83-127 191-230 (648)
127 TIGR01530 nadN NAD pyrophospha 59.6 17 0.00037 37.8 5.5 64 58-126 3-93 (550)
128 KOG3947|consensus 58.4 13 0.00028 35.2 3.9 64 56-127 62-126 (305)
129 KOG2679|consensus 51.6 10 0.00023 35.9 2.1 68 56-127 44-126 (336)
130 KOG0918|consensus 49.8 0.99 2.1E-05 44.6 -5.0 91 83-179 48-141 (476)
131 PRK09418 bifunctional 2',3'-cy 47.9 24 0.00053 38.3 4.5 68 54-126 38-141 (780)
132 PF02875 Mur_ligase_C: Mur lig 47.7 56 0.0012 24.8 5.5 69 56-124 12-82 (91)
133 KOG3339|consensus 42.9 1.2E+02 0.0027 27.2 7.3 85 84-174 40-140 (211)
134 PF06874 FBPase_2: Firmicute f 41.7 25 0.00055 36.9 3.4 39 83-126 185-223 (640)
135 PF12641 Flavodoxin_3: Flavodo 37.1 1.5E+02 0.0033 25.6 7.0 58 59-119 2-72 (160)
136 PRK10773 murF UDP-N-acetylmura 36.7 2.2E+02 0.0047 28.6 9.2 65 56-120 325-391 (453)
137 PF13258 DUF4049: Domain of un 30.0 3.1E+02 0.0066 25.7 8.0 59 114-179 127-187 (318)
138 smart00854 PGA_cap Bacterial c 29.9 78 0.0017 28.8 4.3 36 268-306 201-236 (239)
139 COG0634 Hpt Hypoxanthine-guani 28.5 4.2E+02 0.0091 23.5 8.7 76 28-107 11-117 (178)
140 COG3855 Fbp Uncharacterized pr 26.1 26 0.00057 35.6 0.5 40 261-300 515-560 (648)
141 PTZ00126 tyrosyl-tRNA syntheta 24.0 2E+02 0.0043 28.6 6.2 36 3-38 24-61 (383)
142 KOG3425|consensus 23.4 2.1E+02 0.0045 23.9 5.1 59 68-126 12-78 (128)
143 cd07382 MPP_DR1281 Deinococcus 23.0 76 0.0017 29.6 2.9 37 85-122 1-37 (255)
144 TIGR00282 metallophosphoestera 22.2 79 0.0017 29.8 2.9 39 85-127 2-41 (266)
145 COG3207 DIT1 Pyoverdine/dityro 20.5 1.2E+02 0.0026 28.8 3.6 42 51-92 101-156 (330)
146 smart00526 H15 Domain in histo 20.4 3E+02 0.0066 19.5 5.1 51 4-54 14-64 (66)
No 1
>KOG0372|consensus
Probab=100.00 E-value=2e-76 Score=527.64 Aligned_cols=276 Identities=49% Similarity=0.865 Sum_probs=264.9
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCccc
Q psy11398 15 ELDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVD 94 (336)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vD 94 (336)
++++.++++.+.+.+++.++..||.+++++|.+|+|++.+..|++|+|||||++.||.++|+..|.++.+.|+|||||||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecCcEEEeeC
Q psy11398 95 RGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDNRILCMHG 174 (336)
Q Consensus 95 rG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~~il~vHg 174 (336)
||..|+|++.+|+.||.+||++|++||||||++.++..|||++||.+|||...+|+.+.+.|+.||++|++++++|||||
T Consensus 82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG 161 (303)
T KOG0372|consen 82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG 161 (303)
T ss_pred cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCcccccccCCCC
Q psy11398 175 GLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETENWKASNRG 254 (336)
Q Consensus 175 Gi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg 254 (336)
|++|. +.+ ++||+.++|..++|.++.++|+|||||. ...+|+.+|||
T Consensus 162 GlSP~------i~~--------------------------lDqIr~lDR~~Eiph~g~m~DllWSDPe-e~~g~~~SPRG 208 (303)
T KOG0372|consen 162 GLSPS------IQT--------------------------LDQIRVLDRKQEVPHDGAMCDLLWSDPE-EGPGWGLSPRG 208 (303)
T ss_pred CCCcc------hhh--------------------------HHHHHHhhccccCCCCCcchheeccCcc-cCCCcccCCCC
Confidence 99999 888 9999999999999999999999999998 77799999999
Q ss_pred CeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccce---------EEEeecCCC
Q psy11398 255 AGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQ---------SSLLYSRNP 324 (336)
Q Consensus 255 ~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~---------~~~~~~~~~ 324 (336)
+|+.||.+++++|++.||++.|+|+||.+.+||.+.| +++|+|||||||||....|-+++ .+.+|++-|
T Consensus 209 aGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGyk~~F-~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~ 286 (303)
T KOG0372|consen 209 AGYLFGEDVVESFLEANGLSLICRAHQLVMEGYKWHF-DEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAP 286 (303)
T ss_pred ccccccHHHHHHHHHhCChHHHHHHHHHHHhhHHHhc-CCceEEEecCCchhhhcCChHHheeeccccCcceEeeecch
Confidence 9999999999999999999999999999999999999 99999999999999765554443 456777666
No 2
>KOG0373|consensus
Probab=100.00 E-value=8.1e-70 Score=478.60 Aligned_cols=272 Identities=46% Similarity=0.876 Sum_probs=263.1
Q ss_pred ccCHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCc
Q psy11398 13 GNELDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDY 92 (336)
Q Consensus 13 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~ 92 (336)
.++++++|+.+++++.|+++++..||+.++++|..|.++++++.|+.|+|||||+|.+|.++|+..|..|++.|+|+|||
T Consensus 3 ~~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDf 82 (306)
T KOG0373|consen 3 KMDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDF 82 (306)
T ss_pred cCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEeccc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecCcEEEe
Q psy11398 93 VDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDNRILCM 172 (336)
Q Consensus 93 vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~~il~v 172 (336)
||||..|+|+..+|+.||.+||.+|.+||||||++.+...|||++||..|||....|+.+..+|+.|+++|+++++++||
T Consensus 83 VDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCV 162 (306)
T KOG0373|consen 83 VDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCV 162 (306)
T ss_pred cccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCcccccccCC
Q psy11398 173 HGGLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETENWKASN 252 (336)
Q Consensus 173 HgGi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~ 252 (336)
|||+||+ +.. ++||+-+.|..++|.++.++|++||||. +.+.|.-++
T Consensus 163 HGGLSPd------irt--------------------------lDqir~i~R~qEiPh~G~fcDlmWSDPe-dve~W~vSp 209 (306)
T KOG0373|consen 163 HGGLSPD------IRT--------------------------LDQIRLIERNQEIPHEGPFCDLMWSDPE-DVETWAVSP 209 (306)
T ss_pred cCCCCcc------cee--------------------------HHHHHhHHhhccCCCCCCccceeccChh-hhhhheeCC
Confidence 9999999 888 9999999999999999999999999999 799999999
Q ss_pred CCCeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccceEE
Q psy11398 253 RGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQSS 317 (336)
Q Consensus 253 rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~~~ 317 (336)
||+|+.||++++.+|..-|++++|+|+||.+.+||++.|+++.++|||||||||....|.+.++.
T Consensus 210 RGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~ 274 (306)
T KOG0373|consen 210 RGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMS 274 (306)
T ss_pred CCcceeechhhhHHHHhccchHHHHhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEE
Confidence 99999999999999999999999999999999999999955559999999999988777766654
No 3
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=2.6e-67 Score=494.90 Aligned_cols=270 Identities=55% Similarity=0.942 Sum_probs=258.0
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCccc
Q psy11398 15 ELDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVD 94 (336)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vD 94 (336)
+++++++++.+.+.++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++|||||||||
T Consensus 1 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVD 80 (285)
T cd07415 1 DLDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVD 80 (285)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECC
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecCcEEEeeC
Q psy11398 95 RGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDNRILCMHG 174 (336)
Q Consensus 95 rG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~~il~vHg 174 (336)
||++++|++.++++||..+|+++++||||||.+.++..|+|..|+..+|+...+|..+.++|++||++++++++++||||
T Consensus 81 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHg 160 (285)
T cd07415 81 RGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHG 160 (285)
T ss_pred CCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCcccccccCCCC
Q psy11398 175 GLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETENWKASNRG 254 (336)
Q Consensus 175 Gi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg 254 (336)
||+|. +.+ +++++.++|+.+.+..+.+.|+|||||.. ..+|.+++||
T Consensus 161 Gi~p~------~~~--------------------------~~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg 207 (285)
T cd07415 161 GLSPS------IDT--------------------------LDQIRAIDRFQEVPHEGPMCDLLWSDPDD-IEGWGISPRG 207 (285)
T ss_pred CCCCC------ccc--------------------------HHHhhcccCCCCCCCCCCccceEecCCCc-cCCCCcCCCC
Confidence 99999 777 88999999999999888999999999984 5899999999
Q ss_pred CeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccceEEE
Q psy11398 255 AGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQSSL 318 (336)
Q Consensus 255 ~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~~~~ 318 (336)
.|+.||++++++||++||+++||||||++++||++.+ +|+|+||||||||++..+|.|.+..+
T Consensus 208 ~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~-~~~~~TvfSa~~y~~~~~n~~a~l~i 270 (285)
T cd07415 208 AGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWMF-DDKLVTVWSAPNYCYRCGNVASIMEL 270 (285)
T ss_pred CccccCHHHHHHHHHHCCCeEEEEcCccccceEEEec-CCcEEEEecCCcccCCCCceEEEEEE
Confidence 9999999999999999999999999999999999988 99999999999999988888877664
No 4
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=3.3e-67 Score=499.03 Aligned_cols=274 Identities=44% Similarity=0.851 Sum_probs=260.6
Q ss_pred cCCccCHHHHHHHHHhCC--------CCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCC
Q psy11398 10 KRSGNELDSWISQLEKKI--------KLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRI 81 (336)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~--------~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~ 81 (336)
++...+++++++++.+.. .++++++.+||++|+++|++||++++++.+++|||||||++.+|.++|+..+++
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~ 84 (320)
T PTZ00480 5 KKGEIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYP 84 (320)
T ss_pred cccCcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCC
Confidence 556778999999999754 699999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCc
Q psy11398 82 GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPL 161 (336)
Q Consensus 82 ~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~ 161 (336)
+.++|||||||||||++++|++.+++++|..+|.++++||||||.+.++..|+|..|+..+| +..+|..+.++|++||+
T Consensus 85 ~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y-~~~l~~~~~~~F~~LPl 163 (320)
T PTZ00480 85 PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-TIKLWKTFTDCFNCLPV 163 (320)
T ss_pred CcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhc-CHHHHHHHHHHHHhccH
Confidence 99999999999999999999999999999999999999999999999999999999999999 56799999999999999
Q ss_pred eeeecCcEEEeeCCcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCC
Q psy11398 162 CALIDNRILCMHGGLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDP 241 (336)
Q Consensus 162 ~~~v~~~il~vHgGi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp 241 (336)
+|++++++|||||||+|. +.+ +++|+.++|+.+.|..+++.|+|||||
T Consensus 164 aAiI~~~i~cvHGGI~p~------~~~--------------------------l~~i~~i~rp~~~~~~~~~~dllWSDP 211 (320)
T PTZ00480 164 AALIDEKILCMHGGLSPE------LSN--------------------------LEQIRRIMRPTDVPDTGLLCDLLWSDP 211 (320)
T ss_pred hheecCcEEEEcCCcCcc------cCC--------------------------HHHHhcccCCCCCCccchhhheeecCc
Confidence 999999999999999999 776 889999999999998999999999999
Q ss_pred CCcccccccCCCCCeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccceEE
Q psy11398 242 DDETENWKASNRGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQSS 317 (336)
Q Consensus 242 ~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~~~ 317 (336)
.....+|.+++||.|+.||++++++||++|++++||||||++++||++.+ +++|+||||||||++..+|.|.+..
T Consensus 212 ~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~~-~~~~iTvFSa~~Y~~~~~N~ga~l~ 286 (320)
T PTZ00480 212 DKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAHQVVEDGYEFFS-KRQLVTLFSAPNYCGEFDNAGSMMT 286 (320)
T ss_pred ccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEcCccccCceEEeC-CCcEEEEeCCcccCCCCCccEEEEE
Confidence 87788999999999999999999999999999999999999999999987 9999999999999999888887655
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=3.9e-67 Score=499.14 Aligned_cols=270 Identities=36% Similarity=0.595 Sum_probs=241.6
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceeecC----ceeEEecCCCCHHHHHHHHHHcCCCC-Cceeecc
Q psy11398 15 ELDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVVST----PVTACGDIHGQFEDLMYLFKKGGRIG-QEKYLFL 89 (336)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~~~----~i~vvGDIHG~~~~l~~ll~~~~~~~-~~~~vfL 89 (336)
+++++++.+.+.+.|+++++.+||++|+++|++||++++++. |++||||||||+.+|.++|+..|+++ .++||||
T Consensus 6 ~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFL 85 (321)
T cd07420 6 HIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFN 85 (321)
T ss_pred HHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEe
Confidence 388999999999999999999999999999999999999976 89999999999999999999999885 5789999
Q ss_pred CCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCC--cchhhhHHhhhccCCceeeecC
Q psy11398 90 GDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGG--VTVWKNFTDAFDYLPLCALIDN 167 (336)
Q Consensus 90 GD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~--~~~~~~~~~~f~~LP~~~~v~~ 167 (336)
|||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||..||..+|+. ..+|..+.++|++||+++++++
T Consensus 86 GDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaaii~~ 165 (321)
T cd07420 86 GDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATIIDN 165 (321)
T ss_pred ccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEEEcC
Confidence 99999999999999999999999999999999999999999999999999999974 6799999999999999999999
Q ss_pred cEEEeeCCcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccc-----cC--------------
Q psy11398 168 RILCMHGGLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKE-----VP-------------- 228 (336)
Q Consensus 168 ~il~vHgGi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~-----~~-------------- 228 (336)
++|||||||+|. . + +++|+.++|+.. .|
T Consensus 166 ~i~cvHGGi~~~------~-~--------------------------l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~ 212 (321)
T cd07420 166 KILVVHGGISDS------T-D--------------------------LDLLDKIDRHKYVSVLRPPLRKGMEELTGEEED 212 (321)
T ss_pred CEEEEeCCCCCc------c-C--------------------------HHHHHhhhccccccccCCCcccccccccccccc
Confidence 999999999864 1 2 344444444210 01
Q ss_pred --------CcchhhhhcccCCCCcccccccCCCCCeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEe
Q psy11398 229 --------YRGLMTDLLWSDPDDETENWKASNRGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVF 300 (336)
Q Consensus 229 --------~~~~~~dllWsdp~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTif 300 (336)
..+++.|+|||||......|.+++||.|+.||++++++||++|++++||||||++++||++.+ +++|+|||
T Consensus 213 ~~~~~~~~~~~~~~dlLWSDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~-~~~~iTvF 291 (321)
T cd07420 213 PSEPLDKTEWRQILDILWSDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCH-NNKVITIF 291 (321)
T ss_pred ccccccccccchhheeeecCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEec-CCeEEEEe
Confidence 114678999999985555577788999999999999999999999999999999999999988 99999999
Q ss_pred cCCCCccccCCccceEEE
Q psy11398 301 VLLDLRKDINDEGIQSSL 318 (336)
Q Consensus 301 Sa~~~~~~~~~~g~~~~~ 318 (336)
|||||++..+|.|++..+
T Consensus 292 Sa~nY~~~~~N~gavl~i 309 (321)
T cd07420 292 SASNYYEEGSNRGAYIKL 309 (321)
T ss_pred cCCccCCCCCccEEEEEE
Confidence 999999998888888665
No 6
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=7.2e-67 Score=494.88 Aligned_cols=279 Identities=45% Similarity=0.805 Sum_probs=261.2
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCccc
Q psy11398 15 ELDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVD 94 (336)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vD 94 (336)
+++++++.+++.+.++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|+|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999989999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecCcEEEeeC
Q psy11398 95 RGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDNRILCMHG 174 (336)
Q Consensus 95 rG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~~il~vHg 174 (336)
||++++|++.+++++|..+|.++++||||||.+.++..|+|..|+..+|+...+|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCcccccccCCCC
Q psy11398 175 GLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETENWKASNRG 254 (336)
Q Consensus 175 Gi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg 254 (336)
||+|. +.+ +++++.+.|+.++|.++.+.|+|||||. ...+|.+++||
T Consensus 162 Gi~p~------~~~--------------------------l~~i~~i~r~~~~~~~~~~~dllWsDP~-~~~~~~~~~Rg 208 (303)
T PTZ00239 162 GLSPD------MRT--------------------------IDQIRTIDRKIEIPHEGPFCDLMWSDPE-EVEYWAVNSRG 208 (303)
T ss_pred ccCcc------ccc--------------------------HhhhccccCCCCCCCCCCceeeEecCcc-ccCCCccCCCC
Confidence 99999 776 8899999999999988999999999998 57889999999
Q ss_pred CeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccceEE---------EeecCCCC
Q psy11398 255 AGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQSS---------LLYSRNPR 325 (336)
Q Consensus 255 ~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~~~---------~~~~~~~~ 325 (336)
.|+.||++++++||++||+++||||||++++||++.+.+++|+||||||||++..+|.|.+.. .+|.+.|+
T Consensus 209 ~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~ 288 (303)
T PTZ00239 209 AGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPE 288 (303)
T ss_pred CccccCHHHHHHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCc
Confidence 999999999999999999999999999999999988745569999999999988877776654 45655555
Q ss_pred C
Q psy11398 326 S 326 (336)
Q Consensus 326 ~ 326 (336)
+
T Consensus 289 ~ 289 (303)
T PTZ00239 289 S 289 (303)
T ss_pred c
Confidence 4
No 7
>KOG0374|consensus
Probab=100.00 E-value=2.2e-66 Score=494.91 Aligned_cols=273 Identities=46% Similarity=0.843 Sum_probs=257.7
Q ss_pred CccCHHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcC-C
Q psy11398 12 SGNELDSWISQLEKKI----------KLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGG-R 80 (336)
Q Consensus 12 ~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~-~ 80 (336)
..+.+++++..+.+.. .++++++.+||..+.+++.++|+++++++||.|+|||||++.+|.++|...| +
T Consensus 5 ~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~ 84 (331)
T KOG0374|consen 5 ASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSF 84 (331)
T ss_pred chhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCC
Confidence 3455667777665432 4889999999999999999999999999999999999999999999999999 9
Q ss_pred CCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCC
Q psy11398 81 IGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLP 160 (336)
Q Consensus 81 ~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP 160 (336)
|+..+|||||||||||++|+|++.+|+++|+.||++++++|||||.+.++..|||++||.++|+...+|..+++.|++||
T Consensus 85 pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp 164 (331)
T KOG0374|consen 85 PPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLP 164 (331)
T ss_pred CCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999976789999999999999
Q ss_pred ceeeecCcEEEeeCCcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccC
Q psy11398 161 LCALIDNRILCMHGGLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSD 240 (336)
Q Consensus 161 ~~~~v~~~il~vHgGi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsd 240 (336)
++++++++++|+|||++|. +.+ +++|+.|.||.++|+.+++.|++|||
T Consensus 165 ~~a~i~~kI~CmhGGlsp~------l~~--------------------------~~~i~~i~rp~~~~~~gll~DLlWsd 212 (331)
T KOG0374|consen 165 LAALIDGKILCMHGGLSPH------LKS--------------------------LDQIRAIPRPTDSPDKGLLCDLLWSD 212 (331)
T ss_pred hhheecceEEEecCCCChh------hcC--------------------------hHHHhhccCCcCCCccceeeeeeecC
Confidence 9999999999999999999 877 99999999999999999999999999
Q ss_pred CCCcccccccCCCCCeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccceEE
Q psy11398 241 PDDETENWKASNRGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQSS 317 (336)
Q Consensus 241 p~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~~~ 317 (336)
|.....+|.+|.||.++.||++++++||+++++++||||||++.+||++ |++++++||||||+|++..+|+|+++.
T Consensus 213 p~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyef-fa~r~lvTIFSAP~Ycg~~~n~gavm~ 288 (331)
T KOG0374|consen 213 PDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEF-FAGRKLVTIFSAPNYCGEFDNAGAVMR 288 (331)
T ss_pred CCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceE-ecCceEEEEecCchhccccCCceEEEE
Confidence 9988899999999999999999999999999999999999999999999 559999999999999999999877765
No 8
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=6e-66 Score=487.39 Aligned_cols=269 Identities=44% Similarity=0.872 Sum_probs=255.5
Q ss_pred HHHHHHHHHhCC--------CCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCCCCceee
Q psy11398 16 LDSWISQLEKKI--------KLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRIGQEKYL 87 (336)
Q Consensus 16 ~~~~~~~~~~~~--------~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~v 87 (336)
++++++.+.+.. .++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 677888888655 699999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecC
Q psy11398 88 FLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDN 167 (336)
Q Consensus 88 fLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~ 167 (336)
|||||||||++++|++.+++++|..+|.++++||||||.+.++..|+|..|+..+| ...+|..+.++|++||+++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y-~~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhh-hHHHHHHHHHHHHHhHHHHhhCC
Confidence 99999999999999999999999999999999999999999999999999999999 56799999999999999999999
Q ss_pred cEEEeeCCcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCcccc
Q psy11398 168 RILCMHGGLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETEN 247 (336)
Q Consensus 168 ~il~vHgGi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~ 247 (336)
+++|||||++|. +.+ +++|+.++|+.+.|..+++.|+|||||.....+
T Consensus 161 ~i~cvHgGi~p~------~~~--------------------------l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~ 208 (293)
T cd07414 161 KIFCMHGGLSPD------LQS--------------------------MEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQG 208 (293)
T ss_pred cEEEEccCCCcc------cCc--------------------------HHHHhcccCCCCCCchhhHhhhhccCcccccCC
Confidence 999999999999 776 889999999999888899999999999877889
Q ss_pred cccCCCCCeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccceEEE
Q psy11398 248 WKASNRGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQSSL 318 (336)
Q Consensus 248 ~~~~~rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~~~~ 318 (336)
|.+++||.|+.||++++++||++||+++||||||++++||++.+ +++|+||||||||++..+|.|.+..+
T Consensus 209 ~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~-~~~~iTvfSa~~Y~~~~~N~~a~l~i 278 (293)
T cd07414 209 WGENDRGVSFTFGKDVVAKFLNKHDLDLICRAHQVVEDGYEFFA-KRQLVTLFSAPNYCGEFDNAGAMMSV 278 (293)
T ss_pred CccCCCCcceecCHHHHHHHHHHcCCeEEEECCccccCeEEEeC-CCcEEEEecCCcccCCCCceEEEEEE
Confidence 99999999999999999999999999999999999999999977 99999999999999998888887664
No 9
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=1.4e-65 Score=484.50 Aligned_cols=269 Identities=38% Similarity=0.771 Sum_probs=253.4
Q ss_pred HHHHHHHHHhCC--------CCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCCCCceee
Q psy11398 16 LDSWISQLEKKI--------KLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRIGQEKYL 87 (336)
Q Consensus 16 ~~~~~~~~~~~~--------~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~v 87 (336)
++++++++.+.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++||
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 466777777643 688999999999999999999999999999999999999999999999999999989999
Q ss_pred ccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecC
Q psy11398 88 FLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDN 167 (336)
Q Consensus 88 fLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~ 167 (336)
|||||||||++++|++.+++++|..+|.+++++|||||.+.++..|+|..|+..+| +..+|..+.++|++||+++++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y-~~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRY-NIKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHh-hHHHHHHHHHHHHhCchheEecC
Confidence 99999999999999999999999999999999999999999999999999999999 46799999999999999999999
Q ss_pred cEEEeeCCcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCcccc
Q psy11398 168 RILCMHGGLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETEN 247 (336)
Q Consensus 168 ~il~vHgGi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~ 247 (336)
+++|||||++|. +.+ +++++.++|+.+.|..+++.|+|||||.....+
T Consensus 163 ~il~vHgGi~p~------~~~--------------------------l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~ 210 (294)
T PTZ00244 163 KIICMHGGLSPD------LTS--------------------------LASVNEIERPCDVPDRGILCDLLWADPEDEVRG 210 (294)
T ss_pred eeEEEcCCCCch------hhH--------------------------HHHhhhhccccCCCccchhheeeecCcccccCC
Confidence 999999999999 776 888999999999898899999999999877789
Q ss_pred cccCCCCCeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccceEEE
Q psy11398 248 WKASNRGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQSSL 318 (336)
Q Consensus 248 ~~~~~rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~~~~ 318 (336)
|.+++||.|+.||++++++||++||+++||||||++++||++.+ +++|+||||||||++..+|.|.+..+
T Consensus 211 ~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~~~-~~~~iTvfSa~~Y~~~~~N~~a~l~i 280 (294)
T PTZ00244 211 FLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAHQVMERGYGFFA-SRQLVTVFSAPNYCGEFDNDAAVMNI 280 (294)
T ss_pred CCcCCCCCccccCHHHHHHHHHHcCCcEEEEcCccccCceEEcC-CCeEEEEeCCccccCCCCceEEEEEE
Confidence 99999999999999999999999999999999999999999977 99999999999999998888887664
No 10
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.1e-65 Score=485.25 Aligned_cols=278 Identities=37% Similarity=0.694 Sum_probs=256.2
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCccc
Q psy11398 15 ELDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVD 94 (336)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vD 94 (336)
+++-|++++++++.++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|||||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 36779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecCcEEEeeC
Q psy11398 95 RGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDNRILCMHG 174 (336)
Q Consensus 95 rG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~~il~vHg 174 (336)
||++++||+.+|+++|..+|+++++||||||.+.++..|+|..|+..+| ...+|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 9999999999999999999999999999999999999999999999999 567899999999999999999999999999
Q ss_pred CcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCccc------cc
Q psy11398 175 GLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETE------NW 248 (336)
Q Consensus 175 Gi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~------~~ 248 (336)
|++|. +.+ +++|+.++|+.+.|..+++.|+|||||..... +|
T Consensus 161 Gi~p~------~~~--------------------------l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~ 208 (305)
T cd07416 161 GLSPE------LKT--------------------------LDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHF 208 (305)
T ss_pred CCCcc------ccc--------------------------HHHhcccCCCCCCCCCCcceeeeecCcccccccccccccc
Confidence 99999 776 88999999999888889999999999974332 47
Q ss_pred ccC-CCCCeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCC------eEEEEecCCCCccccCCccceEE----
Q psy11398 249 KAS-NRGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVD------EVEAVFVLLDLRKDINDEGIQSS---- 317 (336)
Q Consensus 249 ~~~-~rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~------~liTifSa~~~~~~~~~~g~~~~---- 317 (336)
.++ +||.|+.||++++++||++||+++||||||++++||++.+ ++ +|+||||||||++..+|.|.+..
T Consensus 209 ~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~-~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~ 287 (305)
T cd07416 209 VHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEAQDAGYRMYR-KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN 287 (305)
T ss_pred cccCCCCCceecCHHHHHHHHHHcCCeEEEEeccccccceEEec-CCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCC
Confidence 765 8999999999999999999999999999999999999977 65 99999999999998877776654
Q ss_pred ----EeecCCCCC
Q psy11398 318 ----LLYSRNPRS 326 (336)
Q Consensus 318 ----~~~~~~~~~ 326 (336)
.+|++.|.+
T Consensus 288 ~~~~~~~~~~~~~ 300 (305)
T cd07416 288 VMNIRQFNCSPHP 300 (305)
T ss_pred cceEEEecCCCCC
Confidence 556666554
No 11
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.7e-64 Score=481.56 Aligned_cols=268 Identities=37% Similarity=0.662 Sum_probs=248.8
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceeecCc----eeEEecCCCCHHHHHHHHHHcCCCCC-ceeecc
Q psy11398 15 ELDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVVSTP----VTACGDIHGQFEDLMYLFKKGGRIGQ-EKYLFL 89 (336)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~~~~----i~vvGDIHG~~~~l~~ll~~~~~~~~-~~~vfL 89 (336)
.++++++++++.+.|+++++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+..++++. ++||||
T Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFL 94 (316)
T cd07417 15 FVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFN 94 (316)
T ss_pred HHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEE
Confidence 3889999999999999999999999999999999999998755 99999999999999999999998754 579999
Q ss_pred CCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecCcE
Q psy11398 90 GDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDNRI 169 (336)
Q Consensus 90 GD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~~i 169 (336)
|||||||++|+||+.++++||..+|+++++||||||.+.++..|+|..|+..+| +..+|..+.++|++||+++++++++
T Consensus 95 GDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~-~~~l~~~~~~~f~~LPlaaii~~~~ 173 (316)
T cd07417 95 GDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKY-NEQMFDLFSEVFNWLPLAHLINGKV 173 (316)
T ss_pred eeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcc-cHHHHHHHHHHHHhchHhheeCCeE
Confidence 999999999999999999999999999999999999999999999999999999 4678999999999999999999999
Q ss_pred EEeeCCcC-CcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCccccc
Q psy11398 170 LCMHGGLS-VKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETENW 248 (336)
Q Consensus 170 l~vHgGi~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 248 (336)
+|||||++ |. ..+ +++++.+.|+.+.|..+++.|+|||||. ...+|
T Consensus 174 ~~vHgGi~~~~------~~~--------------------------l~~i~~i~r~~~~~~~~~~~dllWsDP~-~~~~~ 220 (316)
T cd07417 174 LVVHGGLFSDD------GVT--------------------------LDDIRKIDRFRQPPDSGLMCELLWSDPQ-PQPGR 220 (316)
T ss_pred EEEccccccCC------Ccc--------------------------HHHhhcccCCCCCCccccceeeeecCCC-CCCCC
Confidence 99999995 45 554 8888899999888888899999999998 45789
Q ss_pred ccCCCCCeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccceEE
Q psy11398 249 KASNRGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQSS 317 (336)
Q Consensus 249 ~~~~rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~~~ 317 (336)
.+++||.|+.||++++++||++||+++||||||++++||++.+ +++|+||||||||+++.+|.|.+..
T Consensus 221 ~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~-~~~~~TvfSa~~Y~~~~~N~ga~~~ 288 (316)
T cd07417 221 SPSKRGVGCQFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVEH-DGKCITVFSAPNYCDQMGNKGAFIR 288 (316)
T ss_pred CccCCCCceEeCHHHHHHHHHHcCCcEEEECCcccceeEEEec-CCeEEEEeCCccccCCCCcceEEEE
Confidence 9999999999999999999999999999999999999999988 9999999999999998777776544
No 12
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=4.9e-64 Score=470.39 Aligned_cols=256 Identities=47% Similarity=0.847 Sum_probs=244.4
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHH
Q psy11398 29 LPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFA 108 (336)
Q Consensus 29 l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 108 (336)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.++|||||||||||++++|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecCcEEEeeCCcCCcccccccchh
Q psy11398 109 YKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDNRILCMHGGLSVKCLDIGEINM 188 (336)
Q Consensus 109 Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~~il~vHgGi~p~~~~~~~~~~ 188 (336)
+|..+|+++++||||||.+.++..|+|..|+..+|+ ..+|+.+.++|++||++++++++++|||||++|. +.+
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~------~~~ 153 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPD------LTT 153 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCc------cCC
Confidence 999999999999999999999999999999999994 6899999999999999999999999999999999 777
Q ss_pred hhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCcccccccCCCCCeeeeccchHHHHH
Q psy11398 189 IDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETENWKASNRGAGIIFGPAITSLYT 268 (336)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~g~~fg~~~~~~fl 268 (336)
+++++.++|+.+.+.++.+.|+|||||.....+|.+|+||.|+.||++++++||
T Consensus 154 --------------------------l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl 207 (271)
T smart00156 154 --------------------------LDDIRKLKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFL 207 (271)
T ss_pred --------------------------HHHHhcccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHH
Confidence 889999999998888899999999999767889999999999999999999999
Q ss_pred HhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccceEEE
Q psy11398 269 HFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQSSL 318 (336)
Q Consensus 269 ~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~~~~ 318 (336)
++||+++||||||++++||++.+ +++|+||||||||++..+|.|++..+
T Consensus 208 ~~n~l~~iiR~He~~~~G~~~~~-~~~~~TvfSa~~y~~~~~n~~a~~~i 256 (271)
T smart00156 208 KKNNLKLIIRAHQVVDDGYEFFH-DRKLVTIFSAPNYCGRFGNKAAVLKV 256 (271)
T ss_pred HHCCCeEEEecCcccCCcEEEec-CCcEEEEECCcccccCCCceEEEEEE
Confidence 99999999999999999999988 99999999999999988888887664
No 13
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2.4e-61 Score=466.06 Aligned_cols=298 Identities=31% Similarity=0.529 Sum_probs=244.8
Q ss_pred HHHHHHHHHhC----------CCCCHHHHHHHHHHHHHHHhcCCCceeec----CceeEEecCCCCHHHHHHHHHHcCCC
Q psy11398 16 LDSWISQLEKK----------IKLPESKVKHLCKKAVELLGQEKNVIVVS----TPVTACGDIHGQFEDLMYLFKKGGRI 81 (336)
Q Consensus 16 ~~~~~~~~~~~----------~~l~~~~~~~l~~~a~~il~~e~~~~~~~----~~i~vvGDIHG~~~~l~~ll~~~~~~ 81 (336)
+++|++.++.. ..++.+++.+||++|+++|++||++++++ .+++|||||||++.+|.++|+..+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~~g~~ 91 (377)
T cd07418 12 VHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLEDAGFP 91 (377)
T ss_pred HHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHHhCCC
Confidence 67888888765 35789999999999999999999999998 79999999999999999999999988
Q ss_pred CC-ceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCC--cchhhhHHhhhcc
Q psy11398 82 GQ-EKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGG--VTVWKNFTDAFDY 158 (336)
Q Consensus 82 ~~-~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~--~~~~~~~~~~f~~ 158 (336)
+. +.|||||||||||++++||+.+|+++|..+|++|++||||||.+.++..|+|..|+..+|+. ..+|+.+.++|++
T Consensus 92 ~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~~f~~ 171 (377)
T cd07418 92 DQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLGCFEG 171 (377)
T ss_pred CCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHHHHHh
Confidence 64 56999999999999999999999999999999999999999999999999999999999975 3699999999999
Q ss_pred CCceeeecCcEEEeeCCcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccc-cccCCcc---hhh
Q psy11398 159 LPLCALIDNRILCMHGGLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRV-KEVPYRG---LMT 234 (336)
Q Consensus 159 LP~~~~v~~~il~vHgGi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~-~~~~~~~---~~~ 234 (336)
||++++++++++||||||++.. ++......++ .....++......+..-.++++|+.++|+ .++|..+ ++.
T Consensus 172 LPlaavI~~~i~cvHGGI~~~~-~l~~~~~~~~----~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~ 246 (377)
T cd07418 172 LPLASIIAGRVYTAHGGLFRSP-SLPKRKKQKG----KNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPG 246 (377)
T ss_pred CCcEEEECCCEEEECCCcCCcc-cccccccccc----cccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccce
Confidence 9999999999999999997651 1110000000 00000000000001122347888888886 4555544 478
Q ss_pred hhcccCCCCcccccccC-CCCCeeeeccchHHHHHHhCCceEEEeecee------------ecCCceeeeCC---CeEEE
Q psy11398 235 DLLWSDPDDETENWKAS-NRGAGIIFGPAITSLYTHFNNLAYICRAHQV------------VKEGYGPTQAV---DEVEA 298 (336)
Q Consensus 235 dllWsdp~~~~~~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~------------~~~G~~~~~~~---~~liT 298 (336)
|+|||||. ...+|.++ .||.|+.||++++++||++|++++||||||+ +++||++.+ + ++|+|
T Consensus 247 dlLWSDP~-~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~-~~~~~~liT 324 (377)
T cd07418 247 DVLWSDPS-LTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDH-DVESGKLIT 324 (377)
T ss_pred eeEeeCCc-cCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEec-cCCCCcEEE
Confidence 99999998 45677766 6999999999999999999999999999996 689999987 5 99999
Q ss_pred EecCCCCc------cccCCccceEEEee
Q psy11398 299 VFVLLDLR------KDINDEGIQSSLLY 320 (336)
Q Consensus 299 ifSa~~~~------~~~~~~g~~~~~~~ 320 (336)
|||||||+ +..+|.|++..+.-
T Consensus 325 vFSa~nY~~~~~~~~~~~N~ga~~~~~~ 352 (377)
T cd07418 325 LFSAPDYPQFQATEERYNNKGAYIILQP 352 (377)
T ss_pred EecCCccccccccccccCcceEEEEEec
Confidence 99999999 57888888766533
No 14
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=6.6e-61 Score=457.21 Aligned_cols=258 Identities=38% Similarity=0.693 Sum_probs=237.3
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCCCC--------ceeeccCCcccCCCCc
Q psy11398 28 KLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRIGQ--------EKYLFLGDYVDRGEYS 99 (336)
Q Consensus 28 ~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~~~--------~~~vfLGD~vDrG~~s 99 (336)
.++++++.+||++|+++|++||++++++++++||||||||+++|.++|+.+++++. .+|||||||||||++|
T Consensus 20 ~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s 99 (311)
T cd07419 20 FFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNS 99 (311)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCCh
Confidence 68999999999999999999999999999999999999999999999999988743 5799999999999999
Q ss_pred HHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCC-----cchhhhHHhhhccCCceeeecCcEEEeeC
Q psy11398 100 VECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGG-----VTVWKNFTDAFDYLPLCALIDNRILCMHG 174 (336)
Q Consensus 100 ~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~-----~~~~~~~~~~f~~LP~~~~v~~~il~vHg 174 (336)
+||+.++++|+..+|+++++||||||.+.++..++|..++..+|+. ..+|..+.++|++||++++++++++||||
T Consensus 100 ~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vHg 179 (311)
T cd07419 100 LETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMHG 179 (311)
T ss_pred HHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEcc
Confidence 9999999999999999999999999999999999999999999865 35889999999999999999999999999
Q ss_pred CcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhccccc-ccCCcchhhhhcccCCCCc--ccccccC
Q psy11398 175 GLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVK-EVPYRGLMTDLLWSDPDDE--TENWKAS 251 (336)
Q Consensus 175 Gi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~-~~~~~~~~~dllWsdp~~~--~~~~~~~ 251 (336)
|++|. +.+ +++++.+.|+. ..+..+++.|++||||... ..+|.++
T Consensus 180 Gi~p~------~~~--------------------------l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~ 227 (311)
T cd07419 180 GIGRS------INH--------------------------VSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPN 227 (311)
T ss_pred CCCCC------CCc--------------------------HHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccC
Confidence 99999 776 88899999986 4455678999999999843 3577777
Q ss_pred C---CCCe--eeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccceEEE
Q psy11398 252 N---RGAG--IIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQSSL 318 (336)
Q Consensus 252 ~---rg~g--~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~~~~ 318 (336)
+ ||.| +.||++++++||++||+++||||||++++||++.+ +++|+||||||||++..+|.|++..+
T Consensus 228 ~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~-~~~~iTvfSa~~y~~~~~n~~ai~~i 298 (311)
T cd07419 228 AIDPRGPGLIVKFGPDRVHRFLEENDLQMIIRAHECVMDGFERFA-QGKLITLFSATNYCGTAGNAGAILVL 298 (311)
T ss_pred CCCCCCCCcceeECHHHHHHHHHHCCCeEEEEechhhhCCeEEeC-CCeEEEEecCCcccCCCCceEEEEEE
Confidence 6 9999 69999999999999999999999999999999987 99999999999999998888887654
No 15
>KOG0371|consensus
Probab=100.00 E-value=8.4e-62 Score=436.42 Aligned_cols=285 Identities=51% Similarity=0.873 Sum_probs=270.1
Q ss_pred cccCCccCHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCCCCceee
Q psy11398 8 LSKRSGNELDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRIGQEKYL 87 (336)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~v 87 (336)
+.+.-.++++.+++++..++++++.++..+|+.|+++|++|.++..+..|++|+||+||||++|.++++..|..+++.|+
T Consensus 12 ~~~~~i~~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnyl 91 (319)
T KOG0371|consen 12 LATALILDVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYL 91 (319)
T ss_pred cccccccccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCccee
Confidence 44455677999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecC
Q psy11398 88 FLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDN 167 (336)
Q Consensus 88 fLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~ 167 (336)
|+|||||||++|.|++.+|.++|++||++|.+||||||.+.+...|+|++||.+|||...+|..+.+.|+++|+++.+++
T Consensus 92 fmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~ 171 (319)
T KOG0371|consen 92 FMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 171 (319)
T ss_pred eeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeeCCcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCcccc
Q psy11398 168 RILCMHGGLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETEN 247 (336)
Q Consensus 168 ~il~vHgGi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~ 247 (336)
++||+|||++|+ +.. ++.++.++|..++|.++.++|+|||||. +..+
T Consensus 172 ~ifc~HGgLsps------i~t--------------------------ld~~r~~dr~~evphegpmcDlLwsdpd-dr~g 218 (319)
T KOG0371|consen 172 KIFCLHGGLSPS------IDT--------------------------LDLIRLLDRIQEVPHEGPMCDLLWSDPD-DRCG 218 (319)
T ss_pred ceeeccCCcCcc------cch--------------------------HHHHHHHHHhhcccCCCChhheeccCcc-cCCC
Confidence 999999999999 877 8889999999999999999999999999 8999
Q ss_pred cccCCCCCeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccc---------cCCccceEEE
Q psy11398 248 WKASNRGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKD---------INDEGIQSSL 318 (336)
Q Consensus 248 ~~~~~rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~---------~~~~g~~~~~ 318 (336)
|..++||+|+.||.+..++|-.+||++++-|.||.+.+||.|.+ ...++|||||||||.. ..+..-++++
T Consensus 219 wg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g~nW~~-~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~ 297 (319)
T KOG0371|consen 219 WGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEGYNWYH-LWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFL 297 (319)
T ss_pred CCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhcccceee-ecceeEEccCCchhhccccHHHHhhhhhccCcceE
Confidence 99999999999999999999999999999999999999999999 8888899999999864 3444567789
Q ss_pred eecCCCCC
Q psy11398 319 LYSRNPRS 326 (336)
Q Consensus 319 ~~~~~~~~ 326 (336)
+|+..|+.
T Consensus 298 q~~psp~k 305 (319)
T KOG0371|consen 298 QFDPSPRK 305 (319)
T ss_pred EecCCccc
Confidence 99998865
No 16
>KOG0375|consensus
Probab=100.00 E-value=8.5e-61 Score=446.14 Aligned_cols=282 Identities=39% Similarity=0.698 Sum_probs=260.8
Q ss_pred CCccCHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCCCCceeeccC
Q psy11398 11 RSGNELDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLG 90 (336)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLG 90 (336)
+.+-..+-+-+++.+..+++++..+.++.++..+|++|++++++++||.|+|||||||.||.++|+..|.|..++|+|||
T Consensus 43 ~gkP~~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLG 122 (517)
T KOG0375|consen 43 TGKPRHDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLG 122 (517)
T ss_pred CCCcchHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeec
Confidence 34445677889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecCcEE
Q psy11398 91 DYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDNRIL 170 (336)
Q Consensus 91 D~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~~il 170 (336)
||||||..|+||+.+|.+||+.||..+++||||||++-+...+.|..||..|| ...+++++.+.|+.||++|+.++.++
T Consensus 123 DYVDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQfl 201 (517)
T KOG0375|consen 123 DYVDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFL 201 (517)
T ss_pred cccccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceE
Confidence 99999999999999999999999999999999999999999999999999999 88999999999999999999999999
Q ss_pred EeeCCcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCcc-----
Q psy11398 171 CMHGGLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDET----- 245 (336)
Q Consensus 171 ~vHgGi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~----- 245 (336)
|||||++|+ +.+ +++|++++|+.++|..+.++|+|||||..+.
T Consensus 202 CVHGGlSPE------i~t--------------------------l~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~ 249 (517)
T KOG0375|consen 202 CVHGGLSPE------IHT--------------------------LDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKT 249 (517)
T ss_pred EecCCCCcc------ccc--------------------------HHHHHhhhhccCCCccCcchhhhccChhhhcccccc
Confidence 999999999 988 9999999999999999999999999996432
Q ss_pred -cccccC-CCCCeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCC------eEEEEecCCCCccccCCcc----
Q psy11398 246 -ENWKAS-NRGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVD------EVEAVFVLLDLRKDINDEG---- 313 (336)
Q Consensus 246 -~~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~------~liTifSa~~~~~~~~~~g---- 313 (336)
+.|..| .||++|.|...++.+||+.||+-.|||+|+.++.||.... +. -+|||||||||-+..||.+
T Consensus 250 ~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYr-ksqttGFPSLiTiFSAPNYLDvYnNKAAvLK 328 (517)
T KOG0375|consen 250 SEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYR-KSQTTGFPSLITIFSAPNYLDVYNNKAAVLK 328 (517)
T ss_pred ccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhh-cccccCCchheeeecCCchhhhhccHHHHhh
Confidence 335554 5999999999999999999999999999999999999755 43 4699999999999888874
Q ss_pred ----ceEEEeecCCCCC
Q psy11398 314 ----IQSSLLYSRNPRS 326 (336)
Q Consensus 314 ----~~~~~~~~~~~~~ 326 (336)
+....||-++|++
T Consensus 329 YEnNVMNIRQFncSPHP 345 (517)
T KOG0375|consen 329 YENNVMNIRQFNCSPHP 345 (517)
T ss_pred hhcccceeeccCCCCCC
Confidence 4445888888875
No 17
>KOG0377|consensus
Probab=100.00 E-value=2.6e-55 Score=417.80 Aligned_cols=300 Identities=32% Similarity=0.537 Sum_probs=249.0
Q ss_pred ccCHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceeec----CceeEEecCCCCHHHHHHHHHHcCCCC-Cceee
Q psy11398 13 GNELDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVVS----TPVTACGDIHGQFEDLMYLFKKGGRIG-QEKYL 87 (336)
Q Consensus 13 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~~----~~i~vvGDIHG~~~~l~~ll~~~~~~~-~~~~v 87 (336)
.-+++.+++.++..++|++..+..++.+|+++|++.|++-+++ ..++||||+||.+++|.-+|-+.|+|. ...||
T Consensus 118 ~~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYv 197 (631)
T KOG0377|consen 118 KNHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYV 197 (631)
T ss_pred chHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCee
Confidence 3458899999999999999999999999999999999998764 469999999999999999999999985 45699
Q ss_pred ccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhC--CcchhhhHHhhhccCCceeee
Q psy11398 88 FLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYG--GVTVWKNFTDAFDYLPLCALI 165 (336)
Q Consensus 88 fLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~--~~~~~~~~~~~f~~LP~~~~v 165 (336)
|.||+||||.+|+|+|..|+++-..||+.+++.|||||+.++|-+|||..|+..||. +..+...+.++|+|||++.++
T Consensus 198 FNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tii 277 (631)
T KOG0377|consen 198 FNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTII 277 (631)
T ss_pred ecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhc
Confidence 999999999999999999999999999999999999999999999999999999996 456888999999999999999
Q ss_pred cCcEEEeeCCcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCcc
Q psy11398 166 DNRILCMHGGLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDET 245 (336)
Q Consensus 166 ~~~il~vHgGi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~ 245 (336)
+.+++++||||+.. .|+..+..++|-+.. ++|-++.. +- .+. ..............+.|++||||. ..
T Consensus 278 d~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~----Svlrpp~e---k~--~d~-e~~s~~vg~dEW~Qi~DImWSDP~-~~ 345 (631)
T KOG0377|consen 278 DSRILVVHGGISDS-TDLDLLDKIERGKYV----SVLRPPTE---KG--RDG-EKLSKAVGVDEWQQIFDIMWSDPQ-AT 345 (631)
T ss_pred ccceEEEecCcccc-hhHHHHhhhhcccee----EEecCCcc---cC--ccC-CchhhhcChHHHHHHHHHHhcCcc-cc
Confidence 99999999999866 444444444443321 11111100 00 000 000000011123578899999999 56
Q ss_pred cccccCC-CCCeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccceEEEeecCCC
Q psy11398 246 ENWKASN-RGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQSSLLYSRNP 324 (336)
Q Consensus 246 ~~~~~~~-rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~~~~~~~~~~ 324 (336)
.|+.||. ||.|++||+++++.||++.+++++||+|||.++||+++| +++|+|||||+||...-+|+|.+..+=-...|
T Consensus 346 ~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~H-d~kvlTiFSASNYYe~GSNrGAYikl~~~~~P 424 (631)
T KOG0377|consen 346 MGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCH-DNKVLTIFSASNYYEIGSNRGAYIKLGNQLTP 424 (631)
T ss_pred cCCCcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeee-CCeEEEEEeccchheecCCCceEEEeCCCCCc
Confidence 6666665 999999999999999999999999999999999999999 99999999999999999999999986555555
Q ss_pred C
Q psy11398 325 R 325 (336)
Q Consensus 325 ~ 325 (336)
+
T Consensus 425 h 425 (631)
T KOG0377|consen 425 H 425 (631)
T ss_pred h
Confidence 3
No 18
>KOG0376|consensus
Probab=100.00 E-value=2.9e-44 Score=348.78 Aligned_cols=270 Identities=37% Similarity=0.667 Sum_probs=245.4
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceeecC----ceeEEecCCCCHHHHHHHHHHcCCCC-CceeeccC
Q psy11398 16 LDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVVST----PVTACGDIHGQFEDLMYLFKKGGRIG-QEKYLFLG 90 (336)
Q Consensus 16 ~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~~~----~i~vvGDIHG~~~~l~~ll~~~~~~~-~~~~vfLG 90 (336)
+..+++.......++..-+-+|+..++.++.++|++++++. ++.++||+||++.++.+++...|.++ ...|+|.|
T Consensus 170 vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfng 249 (476)
T KOG0376|consen 170 VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNG 249 (476)
T ss_pred HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccC
Confidence 44455556677789999999999999999999999998764 59999999999999999999999885 46799999
Q ss_pred CcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecCcEE
Q psy11398 91 DYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDNRIL 170 (336)
Q Consensus 91 D~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~~il 170 (336)
|++|||..+.|+...++..|..+|++++++|||||...++..|+|..++..+| .+..+..+.+.|.+||++..++++++
T Consensus 250 dfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~ky-te~~~~~f~~~f~~LPl~~~i~~~~~ 328 (476)
T KOG0376|consen 250 DFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKY-TEEMFNLFSEVFIWLPLAHLINNKVL 328 (476)
T ss_pred ceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhh-HHHHHHhhhhhhccccchhhhcCceE
Confidence 99999999999999999999999999999999999999999999999999999 55666666699999999999999999
Q ss_pred EeeCCcCCcccccccchhhhhhhccCchhhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCccccccc
Q psy11398 171 CMHGGLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETENWKA 250 (336)
Q Consensus 171 ~vHgGi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 250 (336)
.+|||++... -. .++++++|.|+...|.++..+++|||||. ...|..+
T Consensus 329 ~~hgglf~~~-----~v--------------------------~l~d~r~i~r~~~~~~~~~~~~~lws~pq-~~~g~s~ 376 (476)
T KOG0376|consen 329 VMHGGLFSPD-----GV--------------------------TLEDFRNIDRFEQPPEEGLMCELLWSDPQ-PANGRSP 376 (476)
T ss_pred EEecCcCCCC-----Cc--------------------------cHHHHHhhhhccCCcccccccccccCCCc-cccCCCc
Confidence 9999987651 11 28999999999888899999999999998 7889999
Q ss_pred CCCCCeeeeccchHHHHHHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCccccCCccceEEEe
Q psy11398 251 SNRGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLRKDINDEGIQSSLL 319 (336)
Q Consensus 251 ~~rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~~~~~~~g~~~~~~ 319 (336)
+.||.|..||++++++||+.|+++.|||||++.+.||++.+ +|+|+|||||||||+...|.|....+.
T Consensus 377 S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh-~g~l~tvfsapnycd~~~n~ga~i~~~ 444 (476)
T KOG0376|consen 377 SKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEH-SGKLITVFSAPNYCDQMGNKGAFIHLE 444 (476)
T ss_pred cccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeec-CCcEEEEecCcchhhhcCCcceEEEec
Confidence 99999999999999999999999999999999999999999 999999999999999888888776644
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.1e-33 Score=256.97 Aligned_cols=212 Identities=42% Similarity=0.666 Sum_probs=169.9
Q ss_pred eEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHH
Q psy11398 59 TACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDE 138 (336)
Q Consensus 59 ~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e 138 (336)
+|||||||++++|.++++.++..+.+.+|||||++|||+.+.+++.++++++.. |.++++|+||||.+.+....++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999988999999999999999999999999999877 8889999999999988766655443
Q ss_pred H--------HHhhCCcchhhhHHhhhccCCceeeecC-cEEEeeCCcCCcccccccchhhhhhhccCchhhhhhhcCCCc
Q psy11398 139 C--------MRKYGGVTVWKNFTDAFDYLPLCALIDN-RILCMHGGLSVKCLDIGEINMIDRVKACGSMEEILCMHGGLS 209 (336)
Q Consensus 139 ~--------~~~~~~~~~~~~~~~~f~~LP~~~~v~~-~il~vHgGi~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (336)
. ...+.....+....+++..||+++.++. +++|||||++|. ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~------~~~--------------------- 132 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPG------LPL--------------------- 132 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCc------cch---------------------
Confidence 2 1223345577888899999999999876 899999999988 432
Q ss_pred cccccccchhhcccccccCCcchhhhhcccCCCCcccccccCCCCCeeeeccchHHHHHHhCCceEEEeeceeecCCcee
Q psy11398 210 VKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETENWKASNRGAGIIFGPAITSLYTHFNNLAYICRAHQVVKEGYGP 289 (336)
Q Consensus 210 ~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iiRgH~~~~~G~~~ 289 (336)
.++.. ..+......+++|++|.........+.++. |+++++.|++.++.+.|||||+++..|+.+
T Consensus 133 -----~~~~~------~~~~~~~~~~~lw~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~ 197 (225)
T cd00144 133 -----EEQIK------EEPEDQLPEDLLWSDPLELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEF 197 (225)
T ss_pred -----HHhhh------cCcccccceeeeecCCCCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEE
Confidence 11111 123344578999999974433333444544 999999999999999999999999999875
Q ss_pred eeCCCeEEEEecCCCCccccCCccc
Q psy11398 290 TQAVDEVEAVFVLLDLRKDINDEGI 314 (336)
Q Consensus 290 ~~~~~~liTifSa~~~~~~~~~~g~ 314 (336)
.. .++++||+|++.|++..++.+.
T Consensus 198 ~~-~~~~i~IDtg~~~~~~~~~~l~ 221 (225)
T cd00144 198 GH-DGNLITIDSGCNYCGGGGNKLA 221 (225)
T ss_pred cC-CCCEEEEecCCcccCCCCccEE
Confidence 45 7899999999999765555443
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.94 E-value=1.3e-26 Score=214.55 Aligned_cols=122 Identities=25% Similarity=0.443 Sum_probs=97.9
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCC---------CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRI---------GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~---------~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
++++||||||||++.|.++|+++++. +.+++|||||||||||+|.+||++++++. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57899999999999999999998873 46789999999999999999999999885 35679999999998
Q ss_pred cccccccC-------ChHHHHHhhCC------cchhhhHHhhhccCCceeeec-CcEEEeeCCcCCc
Q psy11398 127 RSTSQVYG-------FYDECMRKYGG------VTVWKNFTDAFDYLPLCALID-NRILCMHGGLSVK 179 (336)
Q Consensus 127 ~~~~~~~~-------f~~e~~~~~~~------~~~~~~~~~~f~~LP~~~~v~-~~il~vHgGi~p~ 179 (336)
++++...+ ...+....|.. ..+.+.+.++++.||++..++ ++++|||||+.|.
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~ 145 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQD 145 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChH
Confidence 87653221 12233333421 235677889999999998774 6799999999887
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.93 E-value=3.8e-25 Score=200.06 Aligned_cols=178 Identities=21% Similarity=0.279 Sum_probs=131.1
Q ss_pred eEEecCCCCHHHHHHHHHHcCC--------CCCceeeccCCcccCCCCcHHHHHHHHHhhhh---CCCeEEEEccccccc
Q psy11398 59 TACGDIHGQFEDLMYLFKKGGR--------IGQEKYLFLGDYVDRGEYSVECISLLFAYKIK---YPNYVFLLRGNHECR 127 (336)
Q Consensus 59 ~vvGDIHG~~~~l~~ll~~~~~--------~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~---~p~~v~lLrGNHE~~ 127 (336)
+||||||||+++|.++|+.+++ .+.+.+|++||+||||+++.+|+++|++|+.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35789999999999999999999999999754 457899999999999
Q ss_pred ccccccCChH-HHHHhhCC-----c---chhhhHHhhhccCCceeeecCcEEEeeCCcCCcccccccchhhhhhhccCch
Q psy11398 128 STSQVYGFYD-ECMRKYGG-----V---TVWKNFTDAFDYLPLCALIDNRILCMHGGLSVKCLDIGEINMIDRVKACGSM 198 (336)
Q Consensus 128 ~~~~~~~f~~-e~~~~~~~-----~---~~~~~~~~~f~~LP~~~~v~~~il~vHgGi~p~~~~~~~~~~~~~~~~~~~~ 198 (336)
.+...+.+.. ........ . .....+.+|++.+|+...++ +++|||||+.|. ...
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~~------w~r---------- 143 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGPL------WYR---------- 143 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHHH------Hhh----------
Confidence 8875443321 11111101 1 11234578999999999875 699999998554 110
Q ss_pred hhhhhhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCcccccccCCCCCeeeeccchHHHHHHhCCceEEEe
Q psy11398 199 EEILCMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETENWKASNRGAGIIFGPAITSLYTHFNNLAYICR 278 (336)
Q Consensus 199 ~~~~~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iiR 278 (336)
. |..+... . .-+++.++++++.++.+.+|+
T Consensus 144 ------------------------------------~--y~~~~~~-------~-----~~~~~~~~~~l~~~~~~~iv~ 173 (208)
T cd07425 144 ------------------------------------G--YSKETSD-------K-----ECAAAHLDKVLERLGAKRMVV 173 (208)
T ss_pred ------------------------------------H--hhhhhhh-------c-----cchHHHHHHHHHHcCCCeEEE
Confidence 0 0011100 0 001256888999999999999
Q ss_pred eceeecCCceeeeCCCeEEEEecCCC
Q psy11398 279 AHQVVKEGYGPTQAVDEVEAVFVLLD 304 (336)
Q Consensus 279 gH~~~~~G~~~~~~~~~liTifSa~~ 304 (336)
||++++.|....+ +|++++|.++..
T Consensus 174 GHTh~~~~~~~~~-~g~~i~ID~g~~ 198 (208)
T cd07425 174 GHTPQEGGIVTFC-GGKVIRIDVGMS 198 (208)
T ss_pred cCeeeecCceEEE-CCEEEEEeCCcc
Confidence 9999998886456 999999997543
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.92 E-value=1.8e-24 Score=198.83 Aligned_cols=121 Identities=24% Similarity=0.463 Sum_probs=97.2
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCCC----------CceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEccccc
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRIG----------QEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHE 125 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~~----------~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE 125 (336)
+||.||||||||+++|+++|+++++.+ .+++|||||+||||++|.+||++|++++.. .++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 589999999999999999999997753 468999999999999999999999998743 56999999999
Q ss_pred cccccccc--------CChHHHHHhhC--CcchhhhHHhhhccCCceeeec-CcEEEeeCCcCCc
Q psy11398 126 CRSTSQVY--------GFYDECMRKYG--GVTVWKNFTDAFDYLPLCALID-NRILCMHGGLSVK 179 (336)
Q Consensus 126 ~~~~~~~~--------~f~~e~~~~~~--~~~~~~~~~~~f~~LP~~~~v~-~~il~vHgGi~p~ 179 (336)
.+.++... ++ .++...+. ...+.+...+|++.||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~-~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGL-EETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCcc-cchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 98765321 11 12233332 2345677889999999998775 4799999998876
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.90 E-value=2.6e-23 Score=195.28 Aligned_cols=120 Identities=20% Similarity=0.314 Sum_probs=97.3
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCC-CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccC
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRI-GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYG 134 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~ 134 (336)
|+++||||||||++.|+++|+++++. ..+.++|+||+|||||+|.+|+++++++. .++++|+||||.+.+...++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l~----~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSLG----DSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhcC----CCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999999874 56889999999999999999999999873 46999999999987765544
Q ss_pred ChH----HHHHhhCCcchhhhHHhhhccCCceeee-cCcEEEeeCCcCCc
Q psy11398 135 FYD----ECMRKYGGVTVWKNFTDAFDYLPLCALI-DNRILCMHGGLSVK 179 (336)
Q Consensus 135 f~~----e~~~~~~~~~~~~~~~~~f~~LP~~~~v-~~~il~vHgGi~p~ 179 (336)
... +....+-.....+...+|++.+|+...+ ++++++||||++|.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~ 126 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQ 126 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCC
Confidence 321 1222222233456678999999998886 56899999999997
No 24
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.89 E-value=6.6e-23 Score=187.22 Aligned_cols=118 Identities=24% Similarity=0.358 Sum_probs=93.5
Q ss_pred eEEecCCCCHHHHHHHHHHcCCC--------CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccc
Q psy11398 59 TACGDIHGQFEDLMYLFKKGGRI--------GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTS 130 (336)
Q Consensus 59 ~vvGDIHG~~~~l~~ll~~~~~~--------~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~ 130 (336)
+||||||||++.|.++|+++++. +.+.+|||||||||||+|.+||++|+++.. +.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 69999999999999999999765 467999999999999999999999999874 35799999999998764
Q ss_pred cccC------C-----------hHHHHHhhC-CcchhhhHHhhhccCCceeeecCcEEEeeCCcCCc
Q psy11398 131 QVYG------F-----------YDECMRKYG-GVTVWKNFTDAFDYLPLCALIDNRILCMHGGLSVK 179 (336)
Q Consensus 131 ~~~~------f-----------~~e~~~~~~-~~~~~~~~~~~f~~LP~~~~v~~~il~vHgGi~p~ 179 (336)
...+ + ..+..+.++ .....+...+|++.||++... ++++|||||+.+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~~~ 145 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWDET 145 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcCHh
Confidence 3211 0 012233332 234557789999999999885 5799999998644
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.89 E-value=2.4e-23 Score=193.60 Aligned_cols=118 Identities=22% Similarity=0.326 Sum_probs=96.9
Q ss_pred eeEEecCCCCHHHHHHHHHHcCCC-CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCCh
Q psy11398 58 VTACGDIHGQFEDLMYLFKKGGRI-GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFY 136 (336)
Q Consensus 58 i~vvGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~ 136 (336)
++||||||||+++|+++|+++++. +.+.++|+||+|||||+|+||++++++++ +++++|+||||.+.+...+++.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999876 57899999999999999999999999986 4699999999998876554432
Q ss_pred H----HHHHhhCCcchhhhHHhhhccCCceeeecC-cEEEeeCCcCCc
Q psy11398 137 D----ECMRKYGGVTVWKNFTDAFDYLPLCALIDN-RILCMHGGLSVK 179 (336)
Q Consensus 137 ~----e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~-~il~vHgGi~p~ 179 (336)
. +....+-.....+...+|++.+|+...+++ ++++|||||+|.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~ 124 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQ 124 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCC
Confidence 1 122222122344678899999999998764 799999999998
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.88 E-value=5.6e-23 Score=191.97 Aligned_cols=120 Identities=21% Similarity=0.318 Sum_probs=98.6
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCC-CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccC
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRI-GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYG 134 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~ 134 (336)
|.++||||||||+++|+++|+++++. +.+.++|+||+|||||+|++||.+++++. +++++|+||||.+.+...++
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 46899999999999999999999975 57889999999999999999999999875 45889999999988876655
Q ss_pred ChH----HHHHhhCCcchhhhHHhhhccCCceeeec-CcEEEeeCCcCCc
Q psy11398 135 FYD----ECMRKYGGVTVWKNFTDAFDYLPLCALID-NRILCMHGGLSVK 179 (336)
Q Consensus 135 f~~----e~~~~~~~~~~~~~~~~~f~~LP~~~~v~-~~il~vHgGi~p~ 179 (336)
+.. +....+-.....+...+|++.+|+....+ .++++||||++|.
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~ 126 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQ 126 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCC
Confidence 421 12222213455678899999999998654 4699999999998
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.88 E-value=8e-23 Score=186.14 Aligned_cols=117 Identities=26% Similarity=0.368 Sum_probs=89.4
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCC-CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccC
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRI-GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYG 134 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~ 134 (336)
++++||||||||+++|+++|+.+++. ..++++||||+|||||+|.+||++|.+ .++++|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 58999999999999999999999886 578899999999999999999999965 24789999999988754321
Q ss_pred ChHHHHHhhCC----------cchhhhHHhhhccCCceeeec---CcEEEeeCCcCC
Q psy11398 135 FYDECMRKYGG----------VTVWKNFTDAFDYLPLCALID---NRILCMHGGLSV 178 (336)
Q Consensus 135 f~~e~~~~~~~----------~~~~~~~~~~f~~LP~~~~v~---~~il~vHgGi~p 178 (336)
-........|+ ...+....++++.||+...+. +++++||||++.
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~ 147 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPA 147 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCC
Confidence 11011111111 123345668999999998753 579999999843
No 28
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.87 E-value=7.3e-22 Score=178.24 Aligned_cols=118 Identities=23% Similarity=0.389 Sum_probs=94.2
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCC-CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccC
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRI-GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYG 134 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~ 134 (336)
+|++|||||||++.+|+++++.+++. ..+.++++||++|||+++.+++++|.+ ..+++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998875 578899999999999999999999875 24899999999988775543
Q ss_pred --ChHHHHHhhCCcc--------hhhhHHhhhccCCceeeec---CcEEEeeCCcCCc
Q psy11398 135 --FYDECMRKYGGVT--------VWKNFTDAFDYLPLCALID---NRILCMHGGLSVK 179 (336)
Q Consensus 135 --f~~e~~~~~~~~~--------~~~~~~~~f~~LP~~~~v~---~~il~vHgGi~p~ 179 (336)
...+.+..++... ..+...+|++.||+...++ +++++||||+++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~ 132 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSD 132 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcc
Confidence 2233334444332 3455778999999999874 4699999998766
No 29
>PHA02239 putative protein phosphatase
Probab=99.85 E-value=4.2e-21 Score=176.70 Aligned_cols=122 Identities=24% Similarity=0.362 Sum_probs=93.8
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCC--CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEccccccccccccc
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRI--GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVY 133 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~ 133 (336)
|++++||||||+++.|.++++.+... +.+.+||+|||||||+++.+++.+++++.. .+.++++|+||||.+++....
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999988543 468899999999999999999999998754 356799999999998654211
Q ss_pred --------------CChHHHHHhhCCc------------------------------chhhhHHhhhccCCceeeecCcE
Q psy11398 134 --------------GFYDECMRKYGGV------------------------------TVWKNFTDAFDYLPLCALIDNRI 169 (336)
Q Consensus 134 --------------~f~~e~~~~~~~~------------------------------~~~~~~~~~f~~LP~~~~v~~~i 169 (336)
....+++..||.. .....+..|++.||+.... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 0112334455421 0223455688999999985 579
Q ss_pred EEeeCCcCCc
Q psy11398 170 LCMHGGLSVK 179 (336)
Q Consensus 170 l~vHgGi~p~ 179 (336)
+|||||+.|.
T Consensus 159 ifVHAGi~p~ 168 (235)
T PHA02239 159 IFSHSGGVSW 168 (235)
T ss_pred EEEeCCCCCC
Confidence 9999999877
No 30
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.84 E-value=1.2e-20 Score=176.89 Aligned_cols=74 Identities=32% Similarity=0.486 Sum_probs=64.3
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCC------CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCC-eEEEEcccccccc
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRI------GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPN-YVFLLRGNHECRS 128 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~------~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~-~v~lLrGNHE~~~ 128 (336)
.++++||||||+++.|+++|+.+... ..+.+|||||||||||+|.+|+++|++++..+|. .+++|+||||.++
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 36999999999999999999876422 3457999999999999999999999999988875 6899999999775
Q ss_pred c
Q psy11398 129 T 129 (336)
Q Consensus 129 ~ 129 (336)
+
T Consensus 82 l 82 (304)
T cd07421 82 A 82 (304)
T ss_pred H
Confidence 4
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.83 E-value=3.6e-20 Score=168.80 Aligned_cols=116 Identities=22% Similarity=0.281 Sum_probs=86.4
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCC-CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccC
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRI-GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYG 134 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~ 134 (336)
+|++||||||||+++|+++|+.+.+. ..+.++|+||+|||||++.+|+++|.+ .+++.||||||.+.+.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998854 568899999999999999999999864 25889999999987753311
Q ss_pred ChHHHHHhhCCc----------chhhhHHhhhccCCceeeec---CcEEEeeCCcC
Q psy11398 135 FYDECMRKYGGV----------TVWKNFTDAFDYLPLCALID---NRILCMHGGLS 177 (336)
Q Consensus 135 f~~e~~~~~~~~----------~~~~~~~~~f~~LP~~~~v~---~~il~vHgGi~ 177 (336)
-........|.. ........+++.||+...+. +++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 000111111111 12223456899999998763 46899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.24 E-value=2.1e-11 Score=101.64 Aligned_cols=75 Identities=27% Similarity=0.370 Sum_probs=56.6
Q ss_pred CceeEEecCCCCHHHH----HHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHH--HHhhhhCCCeEEEEccccccccc
Q psy11398 56 TPVTACGDIHGQFEDL----MYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLL--FAYKIKYPNYVFLLRGNHECRST 129 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l----~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l--~~Lk~~~p~~v~lLrGNHE~~~~ 129 (336)
+||+++||+|+..... ..+.......+.+.+|++||+++++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4799999999999987 44444444556788999999999999887766654 34444456679999999998754
Q ss_pred c
Q psy11398 130 S 130 (336)
Q Consensus 130 ~ 130 (336)
.
T Consensus 81 ~ 81 (200)
T PF00149_consen 81 N 81 (200)
T ss_dssp H
T ss_pred c
Confidence 4
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.09 E-value=1.9e-09 Score=92.21 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=48.9
Q ss_pred ceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEccccccc
Q psy11398 57 PVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 57 ~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
|+.++||+||+...+.++++.+.. .+.++++||++++++.+. ++ ....+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~--~~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LE--LKAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hh--cCCcEEEEeCCCCCc
Confidence 588999999999999999998755 688999999999998765 12 224599999999964
No 34
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.01 E-value=2.1e-09 Score=92.63 Aligned_cols=62 Identities=16% Similarity=0.149 Sum_probs=50.6
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCC-CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRI-GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
|++.++||+||++.+++.+++.+... +.+.++++||++ +.+++.++.++. ..++.++||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCc
Confidence 57999999999998888777776655 678899999998 467777776553 239999999996
No 35
>PRK09453 phosphodiesterase; Provisional
Probab=98.97 E-value=8.8e-10 Score=97.37 Aligned_cols=68 Identities=22% Similarity=0.332 Sum_probs=56.1
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCC--------cHHHHHHHHHhhhhCCCeEEEEccccccc
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEY--------SVECISLLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~--------s~evl~~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
||+.++||+||++.+++++++.+...+.+.++++||++|+|++ +.+++.++..+. ..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 5899999999999999999998766677899999999998873 456676665442 3599999999964
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.95 E-value=5.6e-09 Score=88.59 Aligned_cols=61 Identities=26% Similarity=0.451 Sum_probs=46.4
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccc
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRS 128 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~ 128 (336)
|||+++||+|++...+.++++.+ ...+.++++||+++ ..++++.+... .+++++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~----~~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFD----PEEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCS----HHHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchh----HHHHHHHHhcC------CEEEEeCCccccc
Confidence 68999999999999999999988 34788999999998 37777777555 4999999999543
No 37
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.93 E-value=9.3e-09 Score=94.71 Aligned_cols=113 Identities=19% Similarity=0.230 Sum_probs=77.1
Q ss_pred ceeEEecCCCCHHHHH-HHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEccccccccccc----
Q psy11398 57 PVTACGDIHGQFEDLM-YLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQ---- 131 (336)
Q Consensus 57 ~i~vvGDIHG~~~~l~-~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~---- 131 (336)
+|+++|||||++.... +.++ ....+.++++||+++. +.+++..|.++. + .+++++||||......
T Consensus 2 rIa~isDiHg~~~~~~~~~l~---~~~pD~Vl~~GDi~~~---~~~~~~~l~~l~--~--p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALH---LLQPDLVLFVGDFGNE---SVQLVRAISSLP--L--PKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHh---ccCCCEEEECCCCCcC---hHHHHHHHHhCC--C--CeEEEcCCCcccccccccch
Confidence 6899999999987642 2333 2345889999999863 567777776553 3 3999999999754220
Q ss_pred ----------------------------------------ccCChH-HHHHhhCCcchhhhHHhhhccCCceeeecCcEE
Q psy11398 132 ----------------------------------------VYGFYD-ECMRKYGGVTVWKNFTDAFDYLPLCALIDNRIL 170 (336)
Q Consensus 132 ----------------------------------------~~~f~~-e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~~il 170 (336)
.+-+.. ++...|+...+.+++...+++++.+......++
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 000112 566667666677888888888864443344799
Q ss_pred EeeCCcCCc
Q psy11398 171 CMHGGLSVK 179 (336)
Q Consensus 171 ~vHgGi~p~ 179 (336)
+.|++++-.
T Consensus 152 iaH~~~~G~ 160 (238)
T cd07397 152 LAHNGPSGL 160 (238)
T ss_pred EeCcCCcCC
Confidence 999997544
No 38
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.90 E-value=3.1e-09 Score=88.40 Aligned_cols=144 Identities=34% Similarity=0.602 Sum_probs=114.1
Q ss_pred cccccCChHHHHHhhCCcchhhh---HHhhhccCCceeeecC-cEEEeeCCcCCcccccccc-hhhhhhhccCchhhhhh
Q psy11398 129 TSQVYGFYDECMRKYGGVTVWKN---FTDAFDYLPLCALIDN-RILCMHGGLSVKCLDIGEI-NMIDRVKACGSMEEILC 203 (336)
Q Consensus 129 ~~~~~~f~~e~~~~~~~~~~~~~---~~~~f~~LP~~~~v~~-~il~vHgGi~p~~~~~~~~-~~~~~~~~~~~~~~~~~ 203 (336)
+...+++..++...++....|.. ..++|+.||+.+..+. .++|.|++++|. + ..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~------~~~~--------------- 61 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPG------LDRL--------------- 61 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcc------hhhh---------------
Confidence 34556777777777755434554 9999999999999887 899999999987 3 22
Q ss_pred hcCCCccccccccchhhccccc--ccCCcchhhhhcccCCCCc-ccccccCCCCCeeeeccchHHHHHHhCCceEEEeec
Q psy11398 204 MHGGLSVKCLDIGEINMIDRVK--EVPYRGLMTDLLWSDPDDE-TENWKASNRGAGIIFGPAITSLYTHFNNLAYICRAH 280 (336)
Q Consensus 204 ~~~~~~~~~~~l~~i~~i~r~~--~~~~~~~~~dllWsdp~~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iiRgH 280 (336)
+++++.+.|.. +++..+...+.+|+++... ...|.++++|.+..+ .+.+..|...+..+.+.++|
T Consensus 62 -----------~~~~~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~ 129 (155)
T COG0639 62 -----------LDIIEVLDRLRACEVPHAGHTHDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAH 129 (155)
T ss_pred -----------HHHHHHHhhhhcccCCCccccccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEe
Confidence 45555555554 5666777777799999853 788999999998877 78888999888888899999
Q ss_pred eeecCCceeeeCCCeEEEEecCCCCc
Q psy11398 281 QVVKEGYGPTQAVDEVEAVFVLLDLR 306 (336)
Q Consensus 281 ~~~~~G~~~~~~~~~liTifSa~~~~ 306 (336)
+.+..++...+ .+..+|.|++++|+
T Consensus 130 ~~~~~d~~~~~-~~~~lt~~~~~~~~ 154 (155)
T COG0639 130 VLYDIDTGAVF-GGGLLTAFSAPNYC 154 (155)
T ss_pred EEEecCceEEe-CCCeeeEEeccccc
Confidence 99999999877 44999999999985
No 39
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.82 E-value=4.2e-08 Score=82.32 Aligned_cols=60 Identities=18% Similarity=0.311 Sum_probs=42.5
Q ss_pred ceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCCcH--HHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 57 PVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSV--ECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 57 ~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
++.++||+||++. .......+.++++||+++++.... +.+.++.+++ .| .+++++||||.
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~ 62 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDL 62 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCC
Confidence 5899999999987 123345688999999999886432 3455555443 22 36789999994
No 40
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.67 E-value=5e-08 Score=89.32 Aligned_cols=70 Identities=16% Similarity=0.233 Sum_probs=58.4
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
++|.+++||||++..++++++.+...+.+.+|++||++++|+..-++..++..+... +..+++++||||.
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~ 74 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDA 74 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCCh
Confidence 579999999999999999999776567789999999999997777777777666533 2349999999995
No 41
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.63 E-value=2.7e-07 Score=74.52 Aligned_cols=67 Identities=27% Similarity=0.391 Sum_probs=49.9
Q ss_pred eEEecCCCCHHHHHHHH--HHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEccccc
Q psy11398 59 TACGDIHGQFEDLMYLF--KKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHE 125 (336)
Q Consensus 59 ~vvGDIHG~~~~l~~ll--~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE 125 (336)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 47999999999888765 33344566889999999999988777555422222334566999999999
No 42
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.52 E-value=7.2e-07 Score=78.83 Aligned_cols=58 Identities=21% Similarity=0.241 Sum_probs=42.8
Q ss_pred ceeEEecCC-CCHH-----HHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 57 PVTACGDIH-GQFE-----DLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 57 ~i~vvGDIH-G~~~-----~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
+|.||||.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..++ ..++.++||||.
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~ 64 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDE 64 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCc
Confidence 478999999 5533 34555543 45688999999985 77888776653 249999999995
No 43
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.39 E-value=5.1e-07 Score=78.91 Aligned_cols=64 Identities=27% Similarity=0.275 Sum_probs=46.5
Q ss_pred eeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCCc-HHHHHHHHHhhhhCCCeEEEEccccccc
Q psy11398 58 VTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYS-VECISLLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 58 i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s-~evl~~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
|.++||+||++..+.. ..+...+.+.+|++||++++|... .+.+..+..+ +-.++.++||||..
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~ 65 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTP 65 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCH
Confidence 5789999999998877 333344568899999999998763 3333344333 33499999999963
No 44
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.30 E-value=1e-05 Score=68.06 Aligned_cols=68 Identities=24% Similarity=0.253 Sum_probs=43.6
Q ss_pred eeEEecCCCCHH----------HHHHHHHHcCCCCCceeeccCCcccCCCCc--HHHHHHHHHhhhhCCCeEEEEccccc
Q psy11398 58 VTACGDIHGQFE----------DLMYLFKKGGRIGQEKYLFLGDYVDRGEYS--VECISLLFAYKIKYPNYVFLLRGNHE 125 (336)
Q Consensus 58 i~vvGDIHG~~~----------~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s--~evl~~l~~Lk~~~p~~v~lLrGNHE 125 (336)
|+.++|+|=... .|.++++.+...+.+.++++||+++.|... .+...++..++... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993221 122344555455678899999999988642 23445555554321 25999999999
Q ss_pred c
Q psy11398 126 C 126 (336)
Q Consensus 126 ~ 126 (336)
.
T Consensus 80 ~ 80 (144)
T cd07400 80 V 80 (144)
T ss_pred E
Confidence 5
No 45
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.28 E-value=6.9e-06 Score=68.70 Aligned_cols=56 Identities=20% Similarity=0.171 Sum_probs=41.9
Q ss_pred eEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEccccc
Q psy11398 59 TACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHE 125 (336)
Q Consensus 59 ~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE 125 (336)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+..++ +..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc
Confidence 3899999998877776664 45678899999973 34566666552 223899999999
No 46
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.24 E-value=1.6e-06 Score=78.29 Aligned_cols=70 Identities=23% Similarity=0.209 Sum_probs=53.9
Q ss_pred CceeEEecCCCCHH----HHHHHHHHcCCCCCceeeccCCcccCCCCcH-HHHHHHHHhhhhCCCeEEEEccccccc
Q psy11398 56 TPVTACGDIHGQFE----DLMYLFKKGGRIGQEKYLFLGDYVDRGEYSV-ECISLLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 56 ~~i~vvGDIHG~~~----~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~-evl~~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
.++++++|+|.... .+.++++.+.....+.++++||++|.+.... .+..++..++.. ..++++.||||..
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~~--~~v~~v~GNHD~~ 76 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKAP--LGVYAVLGNHDYY 76 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCCC--CCEEEECCCcccc
Confidence 57999999998753 6777877766556688999999999987764 566666655433 3499999999964
No 47
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.20 E-value=2.8e-06 Score=79.86 Aligned_cols=69 Identities=20% Similarity=0.141 Sum_probs=53.3
Q ss_pred CceeEEecCCCC----HHHHHHHHHHcCCCCCceeeccCCcccCC-C-CcHHHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 56 TPVTACGDIHGQ----FEDLMYLFKKGGRIGQEKYLFLGDYVDRG-E-YSVECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 56 ~~i~vvGDIHG~----~~~l~~ll~~~~~~~~~~~vfLGD~vDrG-~-~s~evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
.+|++++|+|.. ...+.++++.+.....+.++++||++|.+ + ...++...|..|+...| ++.+.||||.
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~ 124 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDR 124 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCc
Confidence 579999999976 56678888776666778899999999954 2 23346677777775445 9999999995
No 48
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.16 E-value=1.3e-06 Score=75.56 Aligned_cols=67 Identities=24% Similarity=0.177 Sum_probs=47.7
Q ss_pred eeEEecCCCCHHHHHHHH-HHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEccccccc
Q psy11398 58 VTACGDIHGQFEDLMYLF-KKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 58 i~vvGDIHG~~~~l~~ll-~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
+.++||||++.......+ +.....+.+.++++||+++++....... ++...+ .+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~~--~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLALK--GFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhhc--CCccEEEeCCCcceE
Confidence 578999999987776655 3333456678999999999887655443 222222 345699999999975
No 49
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.05 E-value=7.4e-06 Score=75.58 Aligned_cols=69 Identities=17% Similarity=0.292 Sum_probs=48.4
Q ss_pred CceeEEecCCCCH------HHHHHHHHHcCCCCCceeeccCCcccC--C-----CCcHHHHHHHHHhhhhCCCeEEEEcc
Q psy11398 56 TPVTACGDIHGQF------EDLMYLFKKGGRIGQEKYLFLGDYVDR--G-----EYSVECISLLFAYKIKYPNYVFLLRG 122 (336)
Q Consensus 56 ~~i~vvGDIHG~~------~~l~~ll~~~~~~~~~~~vfLGD~vDr--G-----~~s~evl~~l~~Lk~~~p~~v~lLrG 122 (336)
|++++++|+|... ..+.+.|+.. ....+.++++||++|. | +...+++..|..++.. +-.+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 5899999999542 2355555432 2356889999999985 2 2345677777777643 346999999
Q ss_pred cccc
Q psy11398 123 NHEC 126 (336)
Q Consensus 123 NHE~ 126 (336)
|||.
T Consensus 79 NHD~ 82 (241)
T PRK05340 79 NRDF 82 (241)
T ss_pred CCch
Confidence 9995
No 50
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.00 E-value=3.8e-05 Score=67.58 Aligned_cols=64 Identities=16% Similarity=0.149 Sum_probs=46.6
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEccccccc
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
++|.|++|.|+...+..+..+.....+.+.+|.+||++.... +..+..- ...+++.++||.|..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~-----~~~l~~~---~~~~i~~V~GN~D~~ 65 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFT-----LDALEGG---LAAKLIAVRGNCDGE 65 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccc-----hHHhhcc---cccceEEEEccCCCc
Confidence 689999999999976666666666667788999999995432 2222220 135699999999953
No 51
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.95 E-value=1.6e-05 Score=73.14 Aligned_cols=68 Identities=21% Similarity=0.139 Sum_probs=49.1
Q ss_pred ceeEEecCCCCH------HHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEccccccc
Q psy11398 57 PVTACGDIHGQF------EDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 57 ~i~vvGDIHG~~------~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
+|.+++|+|.++ ..+.++++.+.....+.+|++||++++.+...+.+..+.++ .+..+++++||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 588999999763 23566676665556788999999999876555555555443 233499999999964
No 52
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=97.94 E-value=0.0002 Score=64.95 Aligned_cols=68 Identities=21% Similarity=0.270 Sum_probs=43.4
Q ss_pred ceeEEecCCCCH----HHH----HHHHHHcCCCCCceeeccCCcccCCCCcH---HHHHHHHHhh-hhCCCeEEEEcccc
Q psy11398 57 PVTACGDIHGQF----EDL----MYLFKKGGRIGQEKYLFLGDYVDRGEYSV---ECISLLFAYK-IKYPNYVFLLRGNH 124 (336)
Q Consensus 57 ~i~vvGDIHG~~----~~l----~~ll~~~~~~~~~~~vfLGD~vDrG~~s~---evl~~l~~Lk-~~~p~~v~lLrGNH 124 (336)
+++++||+|-.. ..+ ..+.+.+.....+.+|++||+++.+.... .....+..|. ...| ++.++|||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p--~~~~~GNH 79 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIP--YSVLAGNH 79 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCc--EEEECCCC
Confidence 589999999532 223 33444444345678999999999988433 2233344443 1233 88999999
Q ss_pred cc
Q psy11398 125 EC 126 (336)
Q Consensus 125 E~ 126 (336)
|.
T Consensus 80 D~ 81 (214)
T cd07399 80 DL 81 (214)
T ss_pred cc
Confidence 93
No 53
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.85 E-value=0.00026 Score=63.18 Aligned_cols=70 Identities=11% Similarity=0.073 Sum_probs=43.8
Q ss_pred CceeEEecCCCCHH------------HHHHHHHHcCCCCCceeeccCCcccCCCCc---HHHHHHHHHhhhhCCCeEEEE
Q psy11398 56 TPVTACGDIHGQFE------------DLMYLFKKGGRIGQEKYLFLGDYVDRGEYS---VECISLLFAYKIKYPNYVFLL 120 (336)
Q Consensus 56 ~~i~vvGDIHG~~~------------~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s---~evl~~l~~Lk~~~p~~v~lL 120 (336)
.++.+++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..+++.....+-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 47899999996322 122222223334567899999999977653 444444443322223348999
Q ss_pred ccccc
Q psy11398 121 RGNHE 125 (336)
Q Consensus 121 rGNHE 125 (336)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 54
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.84 E-value=4.1e-05 Score=71.40 Aligned_cols=72 Identities=18% Similarity=0.162 Sum_probs=49.9
Q ss_pred CceeEEecCCCC------------HHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHH----HHHHHHhhhhCCCeEEE
Q psy11398 56 TPVTACGDIHGQ------------FEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVEC----ISLLFAYKIKYPNYVFL 119 (336)
Q Consensus 56 ~~i~vvGDIHG~------------~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~ev----l~~l~~Lk~~~p~~v~l 119 (336)
+|++.++|+|-. ...|.++++.+.....+.+++.||++|+...+.+. ..++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 579999999942 23455555555444678899999999988655443 34555555433346999
Q ss_pred Eccccccc
Q psy11398 120 LRGNHECR 127 (336)
Q Consensus 120 LrGNHE~~ 127 (336)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999964
No 55
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.82 E-value=0.00057 Score=63.54 Aligned_cols=71 Identities=13% Similarity=0.002 Sum_probs=44.0
Q ss_pred ceeEEecCCCCH----------------HHHHHHHHHcCCC--CCceeeccCCcccCCCCcH---HHHHHHHH-hhhh-C
Q psy11398 57 PVTACGDIHGQF----------------EDLMYLFKKGGRI--GQEKYLFLGDYVDRGEYSV---ECISLLFA-YKIK-Y 113 (336)
Q Consensus 57 ~i~vvGDIHG~~----------------~~l~~ll~~~~~~--~~~~~vfLGD~vDrG~~s~---evl~~l~~-Lk~~-~ 113 (336)
+++++||+|-.. ..|+.+++.+... ..+.++++||+++.|.... +....+.+ ++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 478889988764 2345666665432 5577889999999886541 11222222 2221 1
Q ss_pred CCeEEEEccccccc
Q psy11398 114 PNYVFLLRGNHECR 127 (336)
Q Consensus 114 p~~v~lLrGNHE~~ 127 (336)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 23499999999974
No 56
>KOG0376|consensus
Probab=97.80 E-value=1.8e-06 Score=85.50 Aligned_cols=260 Identities=12% Similarity=0.007 Sum_probs=169.5
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCCceeecC----ceeEEecCCCCHHHHHHHHHHcCCCC-CceeeccCCcccCCCCcHH
Q psy11398 27 IKLPESKVKHLCKKAVELLGQEKNVIVVST----PVTACGDIHGQFEDLMYLFKKGGRIG-QEKYLFLGDYVDRGEYSVE 101 (336)
Q Consensus 27 ~~l~~~~~~~l~~~a~~il~~e~~~~~~~~----~i~vvGDIHG~~~~l~~ll~~~~~~~-~~~~vfLGD~vDrG~~s~e 101 (336)
+.|...++..+++.+.+++..+|+...... -.+.++|.||.+.|+..+++.- |. ..-|++-|++++++....+
T Consensus 13 ~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~ 90 (476)
T KOG0376|consen 13 EALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKK 90 (476)
T ss_pred hhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHH
Confidence 367889999999999999999998877642 3789999999999999998864 32 3459999999999999999
Q ss_pred HHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhhCCcc--hhhhHHhhhccCC-ceeeecCcEEEeeCCcCC
Q psy11398 102 CISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVT--VWKNFTDAFDYLP-LCALIDNRILCMHGGLSV 178 (336)
Q Consensus 102 vl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~--~~~~~~~~f~~LP-~~~~v~~~il~vHgGi~p 178 (336)
.+..+...+...|+...+.|++||+..+...++|..+....++... +...+. +..++ +.....+.++=.| -++-
T Consensus 91 A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~--~~~~~~i~~~y~g~~le~~-kvt~ 167 (476)
T KOG0376|consen 91 ALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKID--EEDMDLIESDYSGPVLEDH-KVTL 167 (476)
T ss_pred HHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCccccccccc--cccccccccccCCcccccc-hhhH
Confidence 9999999999999999999999999998888888888877774322 222121 12222 3444333222222 1111
Q ss_pred cccccccchhhhhhhccCchhhhhh----hcCCCccccccccchhhcccccccCCc-chhhhhcccCCCCcccccccCCC
Q psy11398 179 KCLDIGEINMIDRVKACGSMEEILC----MHGGLSVKCLDIGEINMIDRVKEVPYR-GLMTDLLWSDPDDETENWKASNR 253 (336)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~i~~i~r~~~~~~~-~~~~dllWsdp~~~~~~~~~~~r 253 (336)
+ .++. +...+. +|......- +++..++.+..+.+-+ ..-.+..|+++......|....+
T Consensus 168 e-----------~vk~---~~~~~~~~~~L~~k~a~~i--~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~n 231 (476)
T KOG0376|consen 168 E-----------FVKT---LMEVFKNQKKLPKKYAYSI--LDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLN 231 (476)
T ss_pred H-----------HHHH---HHHhhhcccccccccceee--HHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhh
Confidence 1 1110 111111 221111110 1222222222221111 14467899999844445556668
Q ss_pred CCeeeeccchHHHHHHhCCceEEEeecee------------ecCCceeee--CCCeEEEEecCCCCcc
Q psy11398 254 GAGIIFGPAITSLYTHFNNLAYICRAHQV------------VKEGYGPTQ--AVDEVEAVFVLLDLRK 307 (336)
Q Consensus 254 g~g~~fg~~~~~~fl~~~~~~~iiRgH~~------------~~~G~~~~~--~~~~liTifSa~~~~~ 307 (336)
+.+...++..+..|+...+..-+.+.+.- ...+|..++ ..+.++++|+.+++++
T Consensus 232 if~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 232 IFELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred hHhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 88888899999999999988888887664 233333322 0245788999998875
No 57
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.77 E-value=6.4e-05 Score=70.42 Aligned_cols=72 Identities=21% Similarity=0.241 Sum_probs=48.2
Q ss_pred ceeEEecCC-CC------------HHHHHHHHHHcCCCCCceeeccCCcccCCCC-cHHHHHHHHHhhhhCCCeEEEEcc
Q psy11398 57 PVTACGDIH-GQ------------FEDLMYLFKKGGRIGQEKYLFLGDYVDRGEY-SVECISLLFAYKIKYPNYVFLLRG 122 (336)
Q Consensus 57 ~i~vvGDIH-G~------------~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~-s~evl~~l~~Lk~~~p~~v~lLrG 122 (336)
++++++|+| +. ...|.++++.+.....+.+|++||+++.|.. +.+-+..+++.-...+-.++.++|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 22 4667777777755557789999999998863 223333333322222234999999
Q ss_pred cccccc
Q psy11398 123 NHECRS 128 (336)
Q Consensus 123 NHE~~~ 128 (336)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999753
No 58
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.75 E-value=8.7e-05 Score=75.85 Aligned_cols=114 Identities=17% Similarity=0.205 Sum_probs=62.0
Q ss_pred cCceeEEecCC-CCH----HHHHHHHHHcC---------CCCCceeeccCCcccC-CCCc---------------HHHHH
Q psy11398 55 STPVTACGDIH-GQF----EDLMYLFKKGG---------RIGQEKYLFLGDYVDR-GEYS---------------VECIS 104 (336)
Q Consensus 55 ~~~i~vvGDIH-G~~----~~l~~ll~~~~---------~~~~~~~vfLGD~vDr-G~~s---------------~evl~ 104 (336)
+.++++++|+| |.. ..+..+++.+. ....+.+|++||++|. |..+ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 35699999999 542 23444444432 1234689999999984 3211 13555
Q ss_pred HHHHhhhhCCCeEEEEccccccccccccc-CChHHHHHhhCCcchhhhHHhhhccCCceeeecC-cEEEeeCCc
Q psy11398 105 LLFAYKIKYPNYVFLLRGNHECRSTSQVY-GFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDN-RILCMHGGL 176 (336)
Q Consensus 105 ~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~-~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~-~il~vHgGi 176 (336)
+|.++... -.|++++||||........ .+.......+.. .-..++.. |....+++ +++++||-.
T Consensus 323 ~L~~L~~~--i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~-----~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIPED--IKIIISPGNHDAVRQAEPQPAFPEEIRSLFPE-----HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhhcC--CeEEEecCCCcchhhccCCCCccHHHHHhcCc-----CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 56555432 3599999999975432211 122222111110 11222333 54444443 789999875
No 59
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.74 E-value=6.3e-05 Score=73.10 Aligned_cols=72 Identities=19% Similarity=0.292 Sum_probs=48.9
Q ss_pred CceeEEecCC-C-----------CHHHHHHHHHHcCCCCCceeeccCCcccCC-CCcHHHHHHHHH--hh--hhCCCeEE
Q psy11398 56 TPVTACGDIH-G-----------QFEDLMYLFKKGGRIGQEKYLFLGDYVDRG-EYSVECISLLFA--YK--IKYPNYVF 118 (336)
Q Consensus 56 ~~i~vvGDIH-G-----------~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG-~~s~evl~~l~~--Lk--~~~p~~v~ 118 (336)
||++.++|+| | ....|.++++.+.....+.+++.||++|+. +.+.+++.++.. ++ ...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5899999999 3 124455555555555678899999999985 445555544433 11 12345699
Q ss_pred EEccccccc
Q psy11398 119 LLRGNHECR 127 (336)
Q Consensus 119 lLrGNHE~~ 127 (336)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 60
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.72 E-value=8.3e-05 Score=64.85 Aligned_cols=66 Identities=21% Similarity=0.285 Sum_probs=43.9
Q ss_pred eeEEecCCCCHHHH---------------HHHHHHcC--CCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEE
Q psy11398 58 VTACGDIHGQFEDL---------------MYLFKKGG--RIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLL 120 (336)
Q Consensus 58 i~vvGDIHG~~~~l---------------~~ll~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lL 120 (336)
+++++|+|=....- ..+++.+. ..+.+.++++||+++++..+.. +.++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 47889999665432 22333322 2356889999999999986544 4444443 3459999
Q ss_pred cccccccc
Q psy11398 121 RGNHECRS 128 (336)
Q Consensus 121 rGNHE~~~ 128 (336)
+||||...
T Consensus 76 ~GNHD~~~ 83 (168)
T cd07390 76 KGNHDSSL 83 (168)
T ss_pred eCCCCchh
Confidence 99999643
No 61
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.64 E-value=8.9e-05 Score=67.99 Aligned_cols=67 Identities=12% Similarity=0.175 Sum_probs=44.0
Q ss_pred eeEEecCCCCH------HHHHHHHHHcCCCCCceeeccCCcccCC-----CC--cHHHHHHHHHhhhhCCCeEEEEcccc
Q psy11398 58 VTACGDIHGQF------EDLMYLFKKGGRIGQEKYLFLGDYVDRG-----EY--SVECISLLFAYKIKYPNYVFLLRGNH 124 (336)
Q Consensus 58 i~vvGDIHG~~------~~l~~ll~~~~~~~~~~~vfLGD~vDrG-----~~--s~evl~~l~~Lk~~~p~~v~lLrGNH 124 (336)
+++++|+|... ..+.+.+..... ..+.++++||++|.. +. ..++...+..|+.. +..+++++|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999543 234444443222 568899999999952 11 13456667777543 45699999999
Q ss_pred cc
Q psy11398 125 EC 126 (336)
Q Consensus 125 E~ 126 (336)
|.
T Consensus 79 D~ 80 (231)
T TIGR01854 79 DF 80 (231)
T ss_pred ch
Confidence 95
No 62
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.62 E-value=0.00016 Score=65.94 Aligned_cols=66 Identities=27% Similarity=0.338 Sum_probs=46.2
Q ss_pred ceeEEecCCCC------------HHHHHHHHHHcCCC--CCceeeccCCcccCCCCc--HHHHHHHHHhhhhCCCeEEEE
Q psy11398 57 PVTACGDIHGQ------------FEDLMYLFKKGGRI--GQEKYLFLGDYVDRGEYS--VECISLLFAYKIKYPNYVFLL 120 (336)
Q Consensus 57 ~i~vvGDIHG~------------~~~l~~ll~~~~~~--~~~~~vfLGD~vDrG~~s--~evl~~l~~Lk~~~p~~v~lL 120 (336)
|+++++|+|=. ...|+++++.+... ..+.+|++||+++.|... ..++..+..+ +-.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 58899999944 34677777766543 667899999999987532 1233444333 3349999
Q ss_pred cccccc
Q psy11398 121 RGNHEC 126 (336)
Q Consensus 121 rGNHE~ 126 (336)
+||||.
T Consensus 77 ~GNHD~ 82 (240)
T cd07402 77 PGNHDD 82 (240)
T ss_pred CCCCCC
Confidence 999996
No 63
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.60 E-value=0.00023 Score=62.20 Aligned_cols=56 Identities=25% Similarity=0.234 Sum_probs=33.8
Q ss_pred HHHHHHHcCCCCCceeeccCCcccCCCCcH--HHHHH-HHHhhhhCCCeEEEEccccccc
Q psy11398 71 LMYLFKKGGRIGQEKYLFLGDYVDRGEYSV--ECISL-LFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 71 l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~--evl~~-l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
+.++.+.+...+.+.+|++||+++...... +.... +..+. ..+-.+++++||||..
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLL-AKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhc-cCCCeEEEEcccCccc
Confidence 344444444456789999999998654332 22111 12221 2345699999999963
No 64
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.58 E-value=0.00014 Score=68.18 Aligned_cols=68 Identities=21% Similarity=0.373 Sum_probs=44.8
Q ss_pred eeEEecCCCCHHHHHHHHHHc---CCCCCceeeccCCcccCCCC-cHHHH-------------HHHHHhhhhCCCeEEEE
Q psy11398 58 VTACGDIHGQFEDLMYLFKKG---GRIGQEKYLFLGDYVDRGEY-SVECI-------------SLLFAYKIKYPNYVFLL 120 (336)
Q Consensus 58 i~vvGDIHG~~~~l~~ll~~~---~~~~~~~~vfLGD~vDrG~~-s~evl-------------~~l~~Lk~~~p~~v~lL 120 (336)
|+|+||+||+++.+.+.++.. ...+.+.+|++||+-..+.. ..+.+ .++..++ ..|--+++|
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~-~~p~~t~fi 79 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEK-KAPILTIFI 79 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCc-cCCeeEEEE
Confidence 689999999999987755433 23467889999999654432 22222 2222222 246558999
Q ss_pred cccccc
Q psy11398 121 RGNHEC 126 (336)
Q Consensus 121 rGNHE~ 126 (336)
.||||.
T Consensus 80 ~GNHE~ 85 (262)
T cd00844 80 GGNHEA 85 (262)
T ss_pred CCCCCC
Confidence 999995
No 65
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.54 E-value=0.00016 Score=64.88 Aligned_cols=72 Identities=26% Similarity=0.254 Sum_probs=48.8
Q ss_pred ceeEEecCC-CCH--------------HHHHHHHHHcCCCCCceeeccCCcccCCCCcHHH----HHHHHHhhhhCCCeE
Q psy11398 57 PVTACGDIH-GQF--------------EDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVEC----ISLLFAYKIKYPNYV 117 (336)
Q Consensus 57 ~i~vvGDIH-G~~--------------~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~ev----l~~l~~Lk~~~p~~v 117 (336)
||+.++|+| |.. ..|.++++.+.....+.+|++||+++....+.+. ..++.+++. .+-.+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKE-AGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHH-CCCCE
Confidence 588999999 321 2466677666555677899999999987655443 333434431 13349
Q ss_pred EEEccccccccc
Q psy11398 118 FLLRGNHECRST 129 (336)
Q Consensus 118 ~lLrGNHE~~~~ 129 (336)
+++.||||....
T Consensus 80 ~~~~GNHD~~~~ 91 (223)
T cd00840 80 FIIAGNHDSPSR 91 (223)
T ss_pred EEecCCCCCccc
Confidence 999999996544
No 66
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.48 E-value=0.00022 Score=64.04 Aligned_cols=68 Identities=21% Similarity=0.244 Sum_probs=38.3
Q ss_pred eEEecCCC---CHHH---HHHHHHHcCCCCCceeeccCCcccCC-----C--Cc-HHHHHHHHHhhhhCCCeEEEEcccc
Q psy11398 59 TACGDIHG---QFED---LMYLFKKGGRIGQEKYLFLGDYVDRG-----E--YS-VECISLLFAYKIKYPNYVFLLRGNH 124 (336)
Q Consensus 59 ~vvGDIHG---~~~~---l~~ll~~~~~~~~~~~vfLGD~vDrG-----~--~s-~evl~~l~~Lk~~~p~~v~lLrGNH 124 (336)
++|+|+|- .... +...+........+.+|++||++|.- . .. .+.+..+..+. ..+..++.+.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCc
Confidence 58999992 2222 22222221113568899999999841 1 11 12223333332 2456799999999
Q ss_pred ccc
Q psy11398 125 ECR 127 (336)
Q Consensus 125 E~~ 127 (336)
|..
T Consensus 80 D~~ 82 (217)
T cd07398 80 DFL 82 (217)
T ss_pred hHH
Confidence 963
No 67
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.44 E-value=0.00029 Score=66.21 Aligned_cols=70 Identities=14% Similarity=0.097 Sum_probs=46.6
Q ss_pred cCceeEEecCC-C-----------CHHHHHHHHHHcCC--CCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEE
Q psy11398 55 STPVTACGDIH-G-----------QFEDLMYLFKKGGR--IGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLL 120 (336)
Q Consensus 55 ~~~i~vvGDIH-G-----------~~~~l~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lL 120 (336)
..+++.++|+| . ....|.++++.+.. +..+.+|+.||+++.|. .+-+..+.+.-...+..++.+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 36799999999 1 14667788876533 24578999999999874 222222222222223449999
Q ss_pred cccccc
Q psy11398 121 RGNHEC 126 (336)
Q Consensus 121 rGNHE~ 126 (336)
+||||.
T Consensus 92 ~GNHD~ 97 (275)
T PRK11148 92 PGNHDF 97 (275)
T ss_pred CCCCCC
Confidence 999996
No 68
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.36 E-value=0.00028 Score=60.98 Aligned_cols=47 Identities=23% Similarity=0.364 Sum_probs=29.9
Q ss_pred CCCceeeccCCcccCCCCcH-H-HHHHHHHhhhh---C-CCeEEEEccccccc
Q psy11398 81 IGQEKYLFLGDYVDRGEYSV-E-CISLLFAYKIK---Y-PNYVFLLRGNHECR 127 (336)
Q Consensus 81 ~~~~~~vfLGD~vDrG~~s~-e-vl~~l~~Lk~~---~-p~~v~lLrGNHE~~ 127 (336)
...+.+|++||+++.+.... + ....+..++.. . +-.+++++||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 45688999999999876421 2 21223333222 1 24599999999964
No 69
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.31 E-value=0.0006 Score=67.80 Aligned_cols=54 Identities=11% Similarity=0.143 Sum_probs=43.6
Q ss_pred cCceeEEecCCCC------------HHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHH
Q psy11398 55 STPVTACGDIHGQ------------FEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFA 108 (336)
Q Consensus 55 ~~~i~vvGDIHG~------------~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 108 (336)
.+||.+++|+|-. +..|.++++.+.....+-+|+.||++|++.-|.+++..++.
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHH
Confidence 3689999999943 55778888888766788999999999999988887755443
No 70
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.31 E-value=0.00062 Score=62.45 Aligned_cols=69 Identities=17% Similarity=0.171 Sum_probs=44.1
Q ss_pred CceeEEecCC-CCHHH----------------HHHHHHHcCCCCCceeeccCCcccCCCC---cHHHHHHHHHhhhhCCC
Q psy11398 56 TPVTACGDIH-GQFED----------------LMYLFKKGGRIGQEKYLFLGDYVDRGEY---SVECISLLFAYKIKYPN 115 (336)
Q Consensus 56 ~~i~vvGDIH-G~~~~----------------l~~ll~~~~~~~~~~~vfLGD~vDrG~~---s~evl~~l~~Lk~~~p~ 115 (336)
.++.||+|+| |--.. |.++.+.+...+.+.+|++||+.+.... ..++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 5799999999 53222 2223333333456889999999976544 223334444433 3
Q ss_pred eEEEEcccccccc
Q psy11398 116 YVFLLRGNHECRS 128 (336)
Q Consensus 116 ~v~lLrGNHE~~~ 128 (336)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 5999999999643
No 71
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.25 E-value=0.00095 Score=62.01 Aligned_cols=73 Identities=23% Similarity=0.295 Sum_probs=51.8
Q ss_pred CceeEEecCCCC------HHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhh--hhCCCeEEEEccccccc
Q psy11398 56 TPVTACGDIHGQ------FEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYK--IKYPNYVFLLRGNHECR 127 (336)
Q Consensus 56 ~~i~vvGDIHG~------~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk--~~~p~~v~lLrGNHE~~ 127 (336)
++++.|+|+|-. ...+..+++.+...+.+.+|+.||+.+.|.. +-+..+.++- ...|..++.++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~--~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEP--EEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCH--HHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 468999999987 3566677777776677999999999999632 2222222222 24567799999999976
Q ss_pred ccc
Q psy11398 128 STS 130 (336)
Q Consensus 128 ~~~ 130 (336)
..+
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 544
No 72
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.23 E-value=0.00062 Score=62.47 Aligned_cols=65 Identities=22% Similarity=0.240 Sum_probs=40.5
Q ss_pred eeEEecCCCC---------H-----HHHHHHHHHcCC--CCCceeeccCCcccCCCCc--HHHHHHHHHhhhhCCCeEEE
Q psy11398 58 VTACGDIHGQ---------F-----EDLMYLFKKGGR--IGQEKYLFLGDYVDRGEYS--VECISLLFAYKIKYPNYVFL 119 (336)
Q Consensus 58 i~vvGDIHG~---------~-----~~l~~ll~~~~~--~~~~~~vfLGD~vDrG~~s--~evl~~l~~Lk~~~p~~v~l 119 (336)
|++++|||-. + +-+.++.+.+.. ++.+.+|+.||+++++... .+.+.+|.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 5789999955 2 222333333221 3678899999999877532 2334444333 334899
Q ss_pred Ecccccc
Q psy11398 120 LRGNHEC 126 (336)
Q Consensus 120 LrGNHE~ 126 (336)
+.||||.
T Consensus 77 V~GNHD~ 83 (232)
T cd07393 77 LKGNHDY 83 (232)
T ss_pred EeCCccc
Confidence 9999996
No 73
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.16 E-value=0.00064 Score=67.76 Aligned_cols=71 Identities=17% Similarity=0.223 Sum_probs=47.4
Q ss_pred CceeEEecCCCCH--------HH----HHHHHHHcCCCCCceeeccCCcccCCCCcHHH----HHHHHHhhhhCCCeEEE
Q psy11398 56 TPVTACGDIHGQF--------ED----LMYLFKKGGRIGQEKYLFLGDYVDRGEYSVEC----ISLLFAYKIKYPNYVFL 119 (336)
Q Consensus 56 ~~i~vvGDIHG~~--------~~----l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~ev----l~~l~~Lk~~~p~~v~l 119 (336)
+|++.++|+|-.. .+ +..+++.+.....+.+|+.||++|++..+.+. ..++..|+.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 5799999999421 11 33444544445678899999999998655433 2344455432 345999
Q ss_pred Eccccccc
Q psy11398 120 LRGNHECR 127 (336)
Q Consensus 120 LrGNHE~~ 127 (336)
+.||||..
T Consensus 80 I~GNHD~~ 87 (407)
T PRK10966 80 LAGNHDSV 87 (407)
T ss_pred EcCCCCCh
Confidence 99999974
No 74
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.05 E-value=0.00064 Score=64.01 Aligned_cols=70 Identities=20% Similarity=0.210 Sum_probs=43.5
Q ss_pred CceeEEecCCCC----HHHHHHHHHHcCCCCCceeeccCCcccCCCCc-----HHHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 56 TPVTACGDIHGQ----FEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYS-----VECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 56 ~~i~vvGDIHG~----~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
-+++++||.|.. ...+..+.+. ....+-+|++||+++.+... -..+..+..+....| ++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccccc
Confidence 369999999963 2333333332 24567788999999644322 223344444433456 8999999997
Q ss_pred ccc
Q psy11398 127 RST 129 (336)
Q Consensus 127 ~~~ 129 (336)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 543
No 75
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.04 E-value=0.00081 Score=62.02 Aligned_cols=68 Identities=16% Similarity=0.166 Sum_probs=40.8
Q ss_pred eEEecCC--CCH---HHHHHHHHHcCCC-----CCceeeccCCcccCCC-----C----------c-HHHHHHHHHhhhh
Q psy11398 59 TACGDIH--GQF---EDLMYLFKKGGRI-----GQEKYLFLGDYVDRGE-----Y----------S-VECISLLFAYKIK 112 (336)
Q Consensus 59 ~vvGDIH--G~~---~~l~~ll~~~~~~-----~~~~~vfLGD~vDrG~-----~----------s-~evl~~l~~Lk~~ 112 (336)
++++|+| +.. ..+..+++.+... ..+.+|++||++|+.. . . .++..++.+|..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~- 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS- 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc-
Confidence 6899999 432 2333444433222 3478999999999731 0 0 123344444442
Q ss_pred CCCeEEEEcccccccc
Q psy11398 113 YPNYVFLLRGNHECRS 128 (336)
Q Consensus 113 ~p~~v~lLrGNHE~~~ 128 (336)
.-.|+++.||||...
T Consensus 81 -~~~v~~ipGNHD~~~ 95 (243)
T cd07386 81 -HIKIIIIPGNHDAVR 95 (243)
T ss_pred -CCeEEEeCCCCCccc
Confidence 345999999999743
No 76
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.98 E-value=0.0016 Score=60.67 Aligned_cols=70 Identities=20% Similarity=0.118 Sum_probs=43.5
Q ss_pred eeEEecCCCCHH------HH-HHHHHHcCCCCCceeeccCCcccCCCCc--------H---HHHHHHHHhhhhCCCeEEE
Q psy11398 58 VTACGDIHGQFE------DL-MYLFKKGGRIGQEKYLFLGDYVDRGEYS--------V---ECISLLFAYKIKYPNYVFL 119 (336)
Q Consensus 58 i~vvGDIHG~~~------~l-~~ll~~~~~~~~~~~vfLGD~vDrG~~s--------~---evl~~l~~Lk~~~p~~v~l 119 (336)
++.++|+|-... .. ..+++.+.....+.+|++||++|+.... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 578999996322 12 3345555555677899999999976521 1 2233333322223466999
Q ss_pred Eccccccc
Q psy11398 120 LRGNHECR 127 (336)
Q Consensus 120 LrGNHE~~ 127 (336)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999984
No 77
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=96.92 E-value=0.0017 Score=59.02 Aligned_cols=72 Identities=24% Similarity=0.228 Sum_probs=54.7
Q ss_pred cCceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcc--cCCCCcHHHHH-HHHHhhhhCCCeEEEEccccccc
Q psy11398 55 STPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYV--DRGEYSVECIS-LLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 55 ~~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~v--DrG~~s~evl~-~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
.+++.++.|+||.++.+.+++..+.....+.+++.||+. +.|+.-.-..+ .+..++. ..-.|+.++||-|..
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~-~~~~v~avpGNcD~~ 77 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKE-LGIPVLAVPGNCDPP 77 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHh-cCCeEEEEcCCCChH
Confidence 578999999999999999999998877788899999999 87765332222 1333332 234599999998853
No 78
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.86 E-value=0.0049 Score=56.59 Aligned_cols=185 Identities=15% Similarity=0.179 Sum_probs=94.9
Q ss_pred eEEecCCCC------HHHHHHHHHHcCCCCCceeeccCCccc--CCCC-----cHHHHHHHHHhhhhCCCeEEEEccccc
Q psy11398 59 TACGDIHGQ------FEDLMYLFKKGGRIGQEKYLFLGDYVD--RGEY-----SVECISLLFAYKIKYPNYVFLLRGNHE 125 (336)
Q Consensus 59 ~vvGDIHG~------~~~l~~ll~~~~~~~~~~~vfLGD~vD--rG~~-----s~evl~~l~~Lk~~~p~~v~lLrGNHE 125 (336)
++|+|+|=. -+.|.+.|+... +..+.+.++||++| .|.+ -.+|...|..+.. .+.+|+++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~-~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLAR-KGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHh-cCCeEEEecCchH
Confidence 368999954 234445555432 25578999999997 2322 2345556655543 4688999999999
Q ss_pred ccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeee---cCcEEEeeCCcCCcccccccchhhhhhhccCchhhhh
Q psy11398 126 CRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALI---DNRILCMHGGLSVKCLDIGEINMIDRVKACGSMEEIL 202 (336)
Q Consensus 126 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v---~~~il~vHgGi~p~~~~~~~~~~~~~~~~~~~~~~~~ 202 (336)
.. +...+ ....|. +.-+|-...+ +.+++++||-.-.. + ...+......+.+.-.+
T Consensus 79 fl-l~~~f------~~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t--~---~~~y~~~r~~~~~~~~~ 136 (237)
T COG2908 79 FL-LGKRF------AQEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCT--D---DRAYQWFRYKVHWAWLQ 136 (237)
T ss_pred HH-HHHHH------HhhcCc----------eEEcCcceeeeecCcEEEEEeCCcccc--h---HHHHHHHHHHcccHHHH
Confidence 32 22111 111211 2334444443 57899999986433 0 11111111111111000
Q ss_pred hhcCCCccccccccchhhcccccccCCcchhhhhcccCCCCcccccccCCCCCe---eeeccchHHHHHHhCCceEEEee
Q psy11398 203 CMHGGLSVKCLDIGEINMIDRVKEVPYRGLMTDLLWSDPDDETENWKASNRGAG---IIFGPAITSLYTHFNNLAYICRA 279 (336)
Q Consensus 203 ~~~~~~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~g---~~fg~~~~~~fl~~~~~~~iiRg 279 (336)
.+ -+..+.. -..-+..-+|+.- .|.+...... ....++.+.+-+++++++.+|.|
T Consensus 137 ~l---------------flnl~l~--~R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~G 194 (237)
T COG2908 137 LL---------------FLNLPLR--VRRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHG 194 (237)
T ss_pred HH---------------HHHhHHH--HHHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEec
Confidence 00 0000000 0011233355544 1222211111 13456777788999999999999
Q ss_pred ceeecCCcee
Q psy11398 280 HQVVKEGYGP 289 (336)
Q Consensus 280 H~~~~~G~~~ 289 (336)
|.-.+..-.+
T Consensus 195 H~Hr~ai~~i 204 (237)
T COG2908 195 HTHRPAIHNI 204 (237)
T ss_pred CcccHhhccC
Confidence 9988765554
No 79
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.86 E-value=0.0018 Score=61.48 Aligned_cols=70 Identities=21% Similarity=0.206 Sum_probs=50.3
Q ss_pred CceeEEecCCCCHHH--HHHHHHHcCCCCCceeeccCCcccC-CC-CcHHHHHHHHHhhhhCCCeEEEEccccccc
Q psy11398 56 TPVTACGDIHGQFED--LMYLFKKGGRIGQEKYLFLGDYVDR-GE-YSVECISLLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~--l~~ll~~~~~~~~~~~vfLGD~vDr-G~-~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
-+|+.++|+|-.... ..+.+........+-+++.||++|+ .+ ....+...|..|+..+| ++++.||||..
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~g--v~av~GNHd~~ 118 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPLG--VFAVLGNHDYG 118 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccCC--EEEEecccccc
Confidence 369999999987755 2333333333334889999999995 44 44557778888886544 99999999854
No 80
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.59 E-value=0.0084 Score=53.80 Aligned_cols=47 Identities=21% Similarity=0.424 Sum_probs=34.9
Q ss_pred CCCceeeccCCcccCCCCc--HHHHHHHHHhhhhCC----CeEEEEccccccc
Q psy11398 81 IGQEKYLFLGDYVDRGEYS--VECISLLFAYKIKYP----NYVFLLRGNHECR 127 (336)
Q Consensus 81 ~~~~~~vfLGD~vDrG~~s--~evl~~l~~Lk~~~p----~~v~lLrGNHE~~ 127 (336)
...+.++|+||++|.|+.. .+..+.+..++..++ -.++.|.||||..
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 3568899999999999854 346676666664422 4588999999954
No 81
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.49 E-value=0.0082 Score=55.21 Aligned_cols=102 Identities=20% Similarity=0.239 Sum_probs=61.0
Q ss_pred ecCceeEEecCCCCHHHHH----------------HHHH-HcCCCCCceeeccCCcccCCCC-----cHHHHHHHHHhhh
Q psy11398 54 VSTPVTACGDIHGQFEDLM----------------YLFK-KGGRIGQEKYLFLGDYVDRGEY-----SVECISLLFAYKI 111 (336)
Q Consensus 54 ~~~~i~vvGDIHG~~~~l~----------------~ll~-~~~~~~~~~~vfLGD~vDrG~~-----s~evl~~l~~Lk~ 111 (336)
...++.||+|+|=.+.... +.+. .+..-..+++|++||+-.-.+. ..++-.++..++.
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 3568999999997665443 2222 1222356889999999865433 2444445544443
Q ss_pred hCCCeEEEEcccccccccccccCChHHHHHhhCCcchhhhHHhhhccCCceeeecCcEEEeeCCcCCc
Q psy11398 112 KYPNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVWKNFTDAFDYLPLCALIDNRILCMHGGLSVK 179 (336)
Q Consensus 112 ~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~f~~LP~~~~v~~~il~vHgGi~p~ 179 (336)
. .+.+++||||...-.-..++. .+.++... .++++++||=-.+.
T Consensus 98 ~---evi~i~GNHD~~i~~~~~~~~-------------------v~v~~~~~--i~~~~~~HGh~~~~ 141 (235)
T COG1407 98 R---EVIIIRGNHDNGIEEILPGFN-------------------VEVVDELE--IGGLLFRHGHKEPE 141 (235)
T ss_pred C---cEEEEeccCCCccccccccCC-------------------ceeeeeEE--ecCEEEEeCCCCCc
Confidence 2 499999999964433333321 11222222 35799999975555
No 82
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.48 E-value=0.008 Score=51.76 Aligned_cols=70 Identities=14% Similarity=0.041 Sum_probs=45.4
Q ss_pred ceeEEecCCC------------CHHHHHHHH-HHcC--CCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEc
Q psy11398 57 PVTACGDIHG------------QFEDLMYLF-KKGG--RIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLR 121 (336)
Q Consensus 57 ~i~vvGDIHG------------~~~~l~~ll-~~~~--~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLr 121 (336)
.++++||.|= +.+....++ .... ..+++.+.+|||+.-.-.+..+..+++..| |+++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEee
Confidence 3788999983 445554433 2221 236788999999986544444455555444 68899999
Q ss_pred ccccccccc
Q psy11398 122 GNHECRSTS 130 (336)
Q Consensus 122 GNHE~~~~~ 130 (336)
||||..-..
T Consensus 81 GNhDk~~~~ 89 (186)
T COG4186 81 GNHDKCHPM 89 (186)
T ss_pred CCCCCCccc
Confidence 999965433
No 83
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.45 E-value=0.0051 Score=53.93 Aligned_cols=49 Identities=27% Similarity=0.381 Sum_probs=31.4
Q ss_pred CCCCCceeeccCCcccCCCCc--HH---HHHHHHHhhhh-C----CCeEEEEccccccc
Q psy11398 79 GRIGQEKYLFLGDYVDRGEYS--VE---CISLLFAYKIK-Y----PNYVFLLRGNHECR 127 (336)
Q Consensus 79 ~~~~~~~~vfLGD~vDrG~~s--~e---vl~~l~~Lk~~-~----p~~v~lLrGNHE~~ 127 (336)
.....+.+|++||++|.+... .+ .+..+.++... . +-.+++++||||..
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 344668899999999988643 22 33333332211 1 34599999999964
No 84
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.34 E-value=0.0089 Score=58.98 Aligned_cols=73 Identities=19% Similarity=0.182 Sum_probs=52.0
Q ss_pred CceeEEecCCCC-------------HHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHh-hhhC--CCeEEE
Q psy11398 56 TPVTACGDIHGQ-------------FEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAY-KIKY--PNYVFL 119 (336)
Q Consensus 56 ~~i~vvGDIHG~-------------~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~L-k~~~--p~~v~l 119 (336)
+|+..++|.|=. +.+|..+++.+.-...+-+|+-||++|++.-|.+++..+.+. +... .=-|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578889999965 355556666665556688999999999998887765554432 2221 123999
Q ss_pred Ecccccccc
Q psy11398 120 LRGNHECRS 128 (336)
Q Consensus 120 LrGNHE~~~ 128 (336)
|.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999864
No 85
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.33 E-value=0.003 Score=57.62 Aligned_cols=71 Identities=23% Similarity=0.295 Sum_probs=43.6
Q ss_pred cCceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHH--------------------------HHHHH
Q psy11398 55 STPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECI--------------------------SLLFA 108 (336)
Q Consensus 55 ~~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl--------------------------~~l~~ 108 (336)
..+|.+++|.||+++.+.++.+.+.....+-+||+||++-....+-|-. .++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 3579999999999999999999887667889999999986544333222 33333
Q ss_pred hhhhCCCeEEEEcccccc
Q psy11398 109 YKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 109 Lk~~~p~~v~lLrGNHE~ 126 (336)
|. ..+--+++|+||||.
T Consensus 85 L~-~~~~p~~~vPG~~Da 101 (255)
T PF14582_consen 85 LG-ELGVPVFVVPGNMDA 101 (255)
T ss_dssp HH-CC-SEEEEE--TTS-
T ss_pred HH-hcCCcEEEecCCCCc
Confidence 33 234559999999996
No 86
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.23 E-value=0.0077 Score=55.44 Aligned_cols=65 Identities=29% Similarity=0.317 Sum_probs=44.0
Q ss_pred ceeEEecCCCCH---------HHHHHHHHHcCCC-CCceeeccCCcccCCCCcH-----HHHHHHHHhhhhCCCeEEEEc
Q psy11398 57 PVTACGDIHGQF---------EDLMYLFKKGGRI-GQEKYLFLGDYVDRGEYSV-----ECISLLFAYKIKYPNYVFLLR 121 (336)
Q Consensus 57 ~i~vvGDIHG~~---------~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s~-----evl~~l~~Lk~~~p~~v~lLr 121 (336)
+|+.++|+||.+ ..+..+++..... +...++..||+++..+.+. .++..+..+. - -++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~-d~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----Y-DAVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----C-CEEee
Confidence 588999999776 5667777776544 3446677999999876543 4555554443 2 23445
Q ss_pred ccccc
Q psy11398 122 GNHEC 126 (336)
Q Consensus 122 GNHE~ 126 (336)
||||.
T Consensus 77 GNHe~ 81 (252)
T cd00845 77 GNHEF 81 (252)
T ss_pred ccccc
Confidence 99994
No 87
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.21 E-value=0.0097 Score=51.22 Aligned_cols=66 Identities=23% Similarity=0.350 Sum_probs=47.5
Q ss_pred eEEecCCCCHHHHHHHHHHcCC--CCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEccccc
Q psy11398 59 TACGDIHGQFEDLMYLFKKGGR--IGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHE 125 (336)
Q Consensus 59 ~vvGDIHG~~~~l~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE 125 (336)
.|+||+||+++.+.+-++.+.. .+-+-++++||+..-....-+.-.++.. ....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g-~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG-SKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC-CccCCCCEEEECCCCC
Confidence 4899999999999887776432 2457899999999765555344344333 3345667999999998
No 88
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.19 E-value=0.079 Score=49.56 Aligned_cols=25 Identities=4% Similarity=0.121 Sum_probs=21.7
Q ss_pred eeccchHHHHHHhCCceEEEeecee
Q psy11398 258 IFGPAITSLYTHFNNLAYICRAHQV 282 (336)
Q Consensus 258 ~fg~~~~~~fl~~~~~~~iiRgH~~ 282 (336)
+-.++..++.|++.+-.+|.-||+.
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCCC
Confidence 4578889999999999999999884
No 89
>PLN02533 probable purple acid phosphatase
Probab=95.75 E-value=0.012 Score=58.95 Aligned_cols=70 Identities=17% Similarity=0.231 Sum_probs=43.4
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCCc-H--HHHHHHHHhhhhCCCeEEEEcccccccc
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYS-V--ECISLLFAYKIKYPNYVFLLRGNHECRS 128 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s-~--evl~~l~~Lk~~~p~~v~lLrGNHE~~~ 128 (336)
-+++++||+|-. ......++.+.....+-++++||+++.+... . +...++..+....| ++.+.||||...
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 469999999632 2222344444334567888999999754332 1 12334444444456 899999999753
No 90
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.62 E-value=0.022 Score=51.01 Aligned_cols=65 Identities=17% Similarity=0.161 Sum_probs=43.0
Q ss_pred ecCCCCHHHHHHHHHHcCC-CCCceeeccCCcccCCCCc-HHHHHHHHHhhhhC---------------------CCeEE
Q psy11398 62 GDIHGQFEDLMYLFKKGGR-IGQEKYLFLGDYVDRGEYS-VECISLLFAYKIKY---------------------PNYVF 118 (336)
Q Consensus 62 GDIHG~~~~l~~ll~~~~~-~~~~~~vfLGD~vDrG~~s-~evl~~l~~Lk~~~---------------------p~~v~ 118 (336)
=|++|+=.=|.++++.+-. -..+.++||||++|.|--+ -|-......++..+ .-.++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 3556666667777776543 3568899999999987432 33344455554433 13578
Q ss_pred EEcccccc
Q psy11398 119 LLRGNHEC 126 (336)
Q Consensus 119 lLrGNHE~ 126 (336)
.|+||||.
T Consensus 103 ~V~GNHDI 110 (193)
T cd08164 103 NIAGNHDV 110 (193)
T ss_pred EECCcccC
Confidence 99999996
No 91
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.53 E-value=0.018 Score=54.03 Aligned_cols=65 Identities=25% Similarity=0.276 Sum_probs=40.6
Q ss_pred ceeEEecCCCCH----------------HHHHHHHHHcCCCCCceeec-cCCcccCCCCc-----------HHHHHHHHH
Q psy11398 57 PVTACGDIHGQF----------------EDLMYLFKKGGRIGQEKYLF-LGDYVDRGEYS-----------VECISLLFA 108 (336)
Q Consensus 57 ~i~vvGDIHG~~----------------~~l~~ll~~~~~~~~~~~vf-LGD~vDrG~~s-----------~evl~~l~~ 108 (336)
+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..++..+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999986 34566666655433344444 89999865421 235555555
Q ss_pred hhhhCCCeEEEEcccccc
Q psy11398 109 YKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 109 Lk~~~p~~v~lLrGNHE~ 126 (336)
+. . -++..||||.
T Consensus 82 ~g---~--d~~~lGNHe~ 94 (277)
T cd07410 82 LG---Y--DAGTLGNHEF 94 (277)
T ss_pred cC---C--CEEeecccCc
Confidence 44 2 2455699995
No 92
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=95.41 E-value=0.03 Score=44.46 Aligned_cols=39 Identities=21% Similarity=0.263 Sum_probs=32.4
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceee
Q psy11398 16 LDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVV 54 (336)
Q Consensus 16 ~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~ 54 (336)
+..|++++++++.|+...+.+|+.++.++|+++|+++++
T Consensus 57 v~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 57 VKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp HHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred HHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 789999999999999999999999999999999999975
No 93
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=95.32 E-value=0.018 Score=59.51 Aligned_cols=40 Identities=23% Similarity=0.215 Sum_probs=34.0
Q ss_pred ccchHHHHHHhCCce----EEEeeceeec--CCceeeeCCCeEEEE
Q psy11398 260 GPAITSLYTHFNNLA----YICRAHQVVK--EGYGPTQAVDEVEAV 299 (336)
Q Consensus 260 g~~~~~~fl~~~~~~----~iiRgH~~~~--~G~~~~~~~~~liTi 299 (336)
.++..+..|+..|++ .||-||.||. .|=..--++||++.|
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VI 552 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVI 552 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEE
Confidence 456677778889998 9999999986 788877789999999
No 94
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=94.86 E-value=0.059 Score=50.20 Aligned_cols=69 Identities=26% Similarity=0.390 Sum_probs=39.9
Q ss_pred ceeEEecCCCC--H--HHHHHHHH-HcCCCCCceeeccCCcc-cCCCCcH------HHHHHHHH-hhhhCCCeEEEEccc
Q psy11398 57 PVTACGDIHGQ--F--EDLMYLFK-KGGRIGQEKYLFLGDYV-DRGEYSV------ECISLLFA-YKIKYPNYVFLLRGN 123 (336)
Q Consensus 57 ~i~vvGDIHG~--~--~~l~~ll~-~~~~~~~~~~vfLGD~v-DrG~~s~------evl~~l~~-Lk~~~p~~v~lLrGN 123 (336)
+++++||.-.. . .++.+.+. .+.....+-+|++||++ +-|.... +.+..++. +....| ++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P--~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP--WYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC--eEEecCC
Confidence 57899998764 1 33433333 33334557799999987 5553211 22222222 222233 9999999
Q ss_pred cccc
Q psy11398 124 HECR 127 (336)
Q Consensus 124 HE~~ 127 (336)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9975
No 95
>KOG3325|consensus
Probab=94.68 E-value=0.21 Score=42.85 Aligned_cols=60 Identities=30% Similarity=0.346 Sum_probs=46.6
Q ss_pred eeEEecCCC--CHHHHHHHHHHcCCCCC-ceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 58 VTACGDIHG--QFEDLMYLFKKGGRIGQ-EKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 58 i~vvGDIHG--~~~~l~~ll~~~~~~~~-~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
+.++||+|= .-.+|-.-|+++-.|++ .+++++|++. +.|++++|..+. +.++++||.-|.
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~ 65 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDE 65 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCc
Confidence 678999994 34556666666656654 6788999986 889999999886 569999998875
No 96
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=94.28 E-value=0.077 Score=49.34 Aligned_cols=65 Identities=23% Similarity=0.286 Sum_probs=41.6
Q ss_pred ceeEEecCCCCH----------HHHHHHHHHcCCCCCceeeccCCcccCCCCc-----HHHHHHHHHhhhhCCCeEEEEc
Q psy11398 57 PVTACGDIHGQF----------EDLMYLFKKGGRIGQEKYLFLGDYVDRGEYS-----VECISLLFAYKIKYPNYVFLLR 121 (336)
Q Consensus 57 ~i~vvGDIHG~~----------~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~Lk~~~p~~v~lLr 121 (336)
+|..++|+||++ ..+..+++.....+.+-++..||+++..+.+ ..++..+-.+.. .+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----cE-Ecc
Confidence 578899999974 4566666665433556677799999865532 234444444332 24 456
Q ss_pred ccccc
Q psy11398 122 GNHEC 126 (336)
Q Consensus 122 GNHE~ 126 (336)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99994
No 97
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=93.73 E-value=0.066 Score=50.76 Aligned_cols=65 Identities=25% Similarity=0.353 Sum_probs=42.7
Q ss_pred ceeEEecCCCCHH--------------HHHHHHHHcCCC-CCceeeccCCcccCCCC-c-----HHHHHHHHHhhhhCCC
Q psy11398 57 PVTACGDIHGQFE--------------DLMYLFKKGGRI-GQEKYLFLGDYVDRGEY-S-----VECISLLFAYKIKYPN 115 (336)
Q Consensus 57 ~i~vvGDIHG~~~--------------~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~-s-----~evl~~l~~Lk~~~p~ 115 (336)
+|..+.|+||++. .+..+++..... ++..++..||++...+. + ..++..+.++...
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~D--- 78 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVD--- 78 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCe---
Confidence 5788999999854 366667665433 34567779999976553 2 2456666665532
Q ss_pred eEEEEcccccc
Q psy11398 116 YVFLLRGNHEC 126 (336)
Q Consensus 116 ~v~lLrGNHE~ 126 (336)
+ +..||||.
T Consensus 79 -a-~t~GNHef 87 (288)
T cd07412 79 -A-SAVGNHEF 87 (288)
T ss_pred -e-eeeccccc
Confidence 4 55599994
No 98
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=93.10 E-value=0.96 Score=45.67 Aligned_cols=78 Identities=26% Similarity=0.304 Sum_probs=46.2
Q ss_pred ceeEEecCCC-CH----HHHHHHHHHcCCC----CCceee-ccCCcccC-C-----------CCcHHHHHHHHHhhhhCC
Q psy11398 57 PVTACGDIHG-QF----EDLMYLFKKGGRI----GQEKYL-FLGDYVDR-G-----------EYSVECISLLFAYKIKYP 114 (336)
Q Consensus 57 ~i~vvGDIHG-~~----~~l~~ll~~~~~~----~~~~~v-fLGD~vDr-G-----------~~s~evl~~l~~Lk~~~p 114 (336)
.+++++|+|= .. +.+...++-++.+ ...+|+ ..||.||- | .+..+-++.+..+-.+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 4899999996 22 3334444443333 233555 58899993 2 133444555555555556
Q ss_pred Ce--EEEEcccccccccccccC
Q psy11398 115 NY--VFLLRGNHECRSTSQVYG 134 (336)
Q Consensus 115 ~~--v~lLrGNHE~~~~~~~~~ 134 (336)
.+ |++.+||||........+
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp 328 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQP 328 (481)
T ss_pred CCceEEEecCCCCccccccCCC
Confidence 44 789999999865544333
No 99
>KOG3662|consensus
Probab=92.65 E-value=0.2 Score=49.74 Aligned_cols=70 Identities=23% Similarity=0.316 Sum_probs=47.0
Q ss_pred ceeEEecCC--C---------CH------HHHHHHHHHcCCC-CCceeeccCCcccCCCC--cHHHHHHHHHhhhhCCC-
Q psy11398 57 PVTACGDIH--G---------QF------EDLMYLFKKGGRI-GQEKYLFLGDYVDRGEY--SVECISLLFAYKIKYPN- 115 (336)
Q Consensus 57 ~i~vvGDIH--G---------~~------~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~--s~evl~~l~~Lk~~~p~- 115 (336)
++.+|+|-| | -+ --|.+.+...-+. ..+.++||||++|-|.. .-|--....+++..+|.
T Consensus 50 ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k 129 (410)
T KOG3662|consen 50 KILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRK 129 (410)
T ss_pred EEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCC
Confidence 688888865 3 11 1233444443333 45778889999998863 45666667777776664
Q ss_pred ---eEEEEcccccc
Q psy11398 116 ---YVFLLRGNHEC 126 (336)
Q Consensus 116 ---~v~lLrGNHE~ 126 (336)
.+..+.||||-
T Consensus 130 ~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 130 GNIKVIYIAGNHDI 143 (410)
T ss_pred CCCeeEEeCCcccc
Confidence 68999999995
No 100
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=91.54 E-value=0.29 Score=45.70 Aligned_cols=64 Identities=20% Similarity=0.200 Sum_probs=37.4
Q ss_pred ceeEEecCCCCH----------------------HHHHHHHHHcCCC-CCce-eeccCCcccCCCCc-----HHHHHHHH
Q psy11398 57 PVTACGDIHGQF----------------------EDLMYLFKKGGRI-GQEK-YLFLGDYVDRGEYS-----VECISLLF 107 (336)
Q Consensus 57 ~i~vvGDIHG~~----------------------~~l~~ll~~~~~~-~~~~-~vfLGD~vDrG~~s-----~evl~~l~ 107 (336)
.|..++|+||++ ..+..+++..... ..+. ++..||+++..+.+ ..++..+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 366778888874 3445556655433 3333 45699999876532 24455554
Q ss_pred HhhhhCCCeEEEEcccccc
Q psy11398 108 AYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 108 ~Lk~~~p~~v~lLrGNHE~ 126 (336)
.+. -.+.. ||||.
T Consensus 82 ~~g----~da~~--GNHef 94 (264)
T cd07411 82 ALG----VDAMV--GHWEF 94 (264)
T ss_pred hhC----CeEEe--ccccc
Confidence 433 22333 99994
No 101
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=91.31 E-value=0.42 Score=45.09 Aligned_cols=65 Identities=18% Similarity=0.202 Sum_probs=39.3
Q ss_pred ceeEEecCCCCH---------------------HHHHHHHHHcCCC-CCceeeccCCcccCCCC-----cHHHHHHHHHh
Q psy11398 57 PVTACGDIHGQF---------------------EDLMYLFKKGGRI-GQEKYLFLGDYVDRGEY-----SVECISLLFAY 109 (336)
Q Consensus 57 ~i~vvGDIHG~~---------------------~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~-----s~evl~~l~~L 109 (336)
+|.-++|+||++ ..+..+++..... +..-++..||++...+. ...++..+..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467789999864 4455566655433 33445558999987653 33445555544
Q ss_pred hhhCCCeEEEEcccccc
Q psy11398 110 KIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 110 k~~~p~~v~lLrGNHE~ 126 (336)
.. + +. ..||||.
T Consensus 82 g~---D-~~-~lGNHef 93 (281)
T cd07409 82 GY---D-AM-TLGNHEF 93 (281)
T ss_pred CC---C-EE-Eeccccc
Confidence 42 2 44 4499994
No 102
>KOG2863|consensus
Probab=90.35 E-value=0.35 Score=47.04 Aligned_cols=73 Identities=25% Similarity=0.441 Sum_probs=47.8
Q ss_pred CceeEEecCCCCHHHHHHHH---HHcCCCCCceeeccCCccc-CCC---CcHHH---------HHHHHHhhhhCCCeEEE
Q psy11398 56 TPVTACGDIHGQFEDLMYLF---KKGGRIGQEKYLFLGDYVD-RGE---YSVEC---------ISLLFAYKIKYPNYVFL 119 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll---~~~~~~~~~~~vfLGD~vD-rG~---~s~ev---------l~~l~~Lk~~~p~~v~l 119 (336)
+||.|=|=-||+++.+.+-+ ++.|-.+.+.++++||+=. |.- +++.| ..--+.=...+|=--++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 58999999999999998544 4555557888999999842 211 11111 11111222346666789
Q ss_pred Ecccccccc
Q psy11398 120 LRGNHECRS 128 (336)
Q Consensus 120 LrGNHE~~~ 128 (336)
|-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999974
No 103
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=89.92 E-value=0.48 Score=44.71 Aligned_cols=72 Identities=19% Similarity=0.209 Sum_probs=42.5
Q ss_pred eeEEecCCCC--HHHHHHHHHHcCCC--CCceeeccCCcccCCCCcH--H------HHHHHHHhhhhCC-CeEEEEcccc
Q psy11398 58 VTACGDIHGQ--FEDLMYLFKKGGRI--GQEKYLFLGDYVDRGEYSV--E------CISLLFAYKIKYP-NYVFLLRGNH 124 (336)
Q Consensus 58 i~vvGDIHG~--~~~l~~ll~~~~~~--~~~~~vfLGD~vDrG~~s~--e------vl~~l~~Lk~~~p-~~v~lLrGNH 124 (336)
.--.|+-.-+ ...+..+++.+... +.+-+|++||+++.+.... + .-.+...++..+| -.|+.+.|||
T Consensus 40 ~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNH 119 (296)
T cd00842 40 AGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNH 119 (296)
T ss_pred CCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCC
Confidence 4445665422 24556666655433 6788999999998775421 1 1222333443333 3499999999
Q ss_pred ccccc
Q psy11398 125 ECRST 129 (336)
Q Consensus 125 E~~~~ 129 (336)
|....
T Consensus 120 D~~p~ 124 (296)
T cd00842 120 DSYPV 124 (296)
T ss_pred CCCcc
Confidence 97644
No 104
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=89.49 E-value=0.14 Score=45.29 Aligned_cols=42 Identities=26% Similarity=0.393 Sum_probs=30.0
Q ss_pred CCceeeccCCcc--cCCCCcHHHHHHHHHhhhhCCCeEEEEccccccc
Q psy11398 82 GQEKYLFLGDYV--DRGEYSVECISLLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 82 ~~~~~vfLGD~v--DrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
+.+.++.-||+- -|=+...+-+.++-+| |+.=+++|||||..
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYW 86 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYW 86 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccc
Confidence 567777899984 3444555566666554 78899999999953
No 105
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=88.61 E-value=0.82 Score=43.06 Aligned_cols=67 Identities=13% Similarity=0.150 Sum_probs=50.2
Q ss_pred CceeEEecCCCC--HHHHHHHHHHcCCC-CCceeeccCCcccCC-CCcHHHHHHHHHhhhhCCCeEEEEccccccc
Q psy11398 56 TPVTACGDIHGQ--FEDLMYLFKKGGRI-GQEKYLFLGDYVDRG-EYSVECISLLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 56 ~~i~vvGDIHG~--~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG-~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
++|.++|||=|. ...+...|..+... +.+-+|..||...-| --+.++...|..+... ++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~GvD----viT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGVN----YITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCCC----EEEc-cchhcc
Confidence 579999999999 57777888776544 345666689998765 4567888888877643 6666 999963
No 106
>KOG1432|consensus
Probab=88.44 E-value=1.6 Score=42.44 Aligned_cols=71 Identities=21% Similarity=0.195 Sum_probs=40.1
Q ss_pred ceeEEecCCCCHH-----------------HHH--HHH-HHcCCCCCceeeccCCcccCCCCcHHHHHHH---HHhhhhC
Q psy11398 57 PVTACGDIHGQFE-----------------DLM--YLF-KKGGRIGQEKYLFLGDYVDRGEYSVECISLL---FAYKIKY 113 (336)
Q Consensus 57 ~i~vvGDIHG~~~-----------------~l~--~ll-~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l---~~Lk~~~ 113 (336)
||+.|.|+|=.+. ++. ..+ +.+.....+.+||+||.|+. ......-..+ .+=.+.+
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc
Confidence 6899999995554 111 111 12233456889999999986 3333322222 2222222
Q ss_pred CCeEEEEcccccccc
Q psy11398 114 PNYVFLLRGNHECRS 128 (336)
Q Consensus 114 p~~v~lLrGNHE~~~ 128 (336)
.=-...+.||||...
T Consensus 134 ~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDES 148 (379)
T ss_pred CCCeEEEeccccccc
Confidence 222568999999753
No 107
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=87.97 E-value=0.61 Score=52.70 Aligned_cols=66 Identities=20% Similarity=0.243 Sum_probs=42.7
Q ss_pred CceeEEecCCCCH---HHHHHHHHHcCCCCCceeec-cCCcccCCCCc-----HHHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 56 TPVTACGDIHGQF---EDLMYLFKKGGRIGQEKYLF-LGDYVDRGEYS-----VECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 56 ~~i~vvGDIHG~~---~~l~~ll~~~~~~~~~~~vf-LGD~vDrG~~s-----~evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
-+|+.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..++..+..+.. -++..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEeccccc
Confidence 3589999999875 55555666554333344444 89999876543 345555555432 3568999995
No 108
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=87.59 E-value=0.87 Score=40.61 Aligned_cols=72 Identities=14% Similarity=0.133 Sum_probs=41.1
Q ss_pred eeEEecCCCC-----HHHHHHHHHHcC-CCCCceeeccCCcccCCCCcH----------HHHHHHHHhhh---h--CCCe
Q psy11398 58 VTACGDIHGQ-----FEDLMYLFKKGG-RIGQEKYLFLGDYVDRGEYSV----------ECISLLFAYKI---K--YPNY 116 (336)
Q Consensus 58 i~vvGDIHG~-----~~~l~~ll~~~~-~~~~~~~vfLGD~vDrG~~s~----------evl~~l~~Lk~---~--~p~~ 116 (336)
|++++|+|=. ++.|.++|+.+. ....+.+|++|+++|.-.... .....+..+.. . .--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5678888765 567778888777 666788999999999632111 11111112111 1 2267
Q ss_pred EEEEccccccccc
Q psy11398 117 VFLLRGNHECRST 129 (336)
Q Consensus 117 v~lLrGNHE~~~~ 129 (336)
|++++|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997544
No 109
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=87.09 E-value=1.1 Score=41.76 Aligned_cols=56 Identities=23% Similarity=0.233 Sum_probs=37.4
Q ss_pred CCHHHHHHHHHHcCCC-CCceeeccCCcccCCCC-----cHHHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 66 GQFEDLMYLFKKGGRI-GQEKYLFLGDYVDRGEY-----SVECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 66 G~~~~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~-----s~evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
|.+..+..+++..... ++.-++..||+++..+. ...++..+..+.. -+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEeeccccc
Confidence 4577788888876543 34467779999987642 3456666665542 3557899994
No 110
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=85.90 E-value=0.97 Score=42.76 Aligned_cols=65 Identities=22% Similarity=0.095 Sum_probs=38.2
Q ss_pred ceeEEecCCCCHHH----------HHHHHHHcCC-----CCCceeeccCCcccCCC-----CcHHHHHHHHHhhhhCCCe
Q psy11398 57 PVTACGDIHGQFED----------LMYLFKKGGR-----IGQEKYLFLGDYVDRGE-----YSVECISLLFAYKIKYPNY 116 (336)
Q Consensus 57 ~i~vvGDIHG~~~~----------l~~ll~~~~~-----~~~~~~vfLGD~vDrG~-----~s~evl~~l~~Lk~~~p~~ 116 (336)
.|....|+||++.. +..+++.... .++.-++-.||.+...+ ....++..+-++...
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~D---- 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYD---- 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCCc----
Confidence 47788999998533 4455554432 23444556999984322 223455566555533
Q ss_pred EEEEcccccc
Q psy11398 117 VFLLRGNHEC 126 (336)
Q Consensus 117 v~lLrGNHE~ 126 (336)
+.. .||||.
T Consensus 78 a~~-~GNHEf 86 (285)
T cd07405 78 AMA-VGNHEF 86 (285)
T ss_pred EEe-eccccc
Confidence 444 499994
No 111
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=82.78 E-value=2.6 Score=39.43 Aligned_cols=65 Identities=18% Similarity=0.211 Sum_probs=46.1
Q ss_pred ceeEEecCCCCH--HHHHHHHHHcCCC-CCceeeccCCcccCC-CCcHHHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 57 PVTACGDIHGQF--EDLMYLFKKGGRI-GQEKYLFLGDYVDRG-EYSVECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 57 ~i~vvGDIHG~~--~~l~~ll~~~~~~-~~~~~vfLGD~vDrG-~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
+|.++|||=|.- ..+...|..+... +.+-++..||..--| .-+.++...|..+... +..+ ||||.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~f 69 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTW 69 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-ccccc
Confidence 578999999986 5556666665433 335566689988666 3677888888887643 5555 99984
No 112
>KOG2476|consensus
Probab=81.50 E-value=3 Score=41.99 Aligned_cols=69 Identities=19% Similarity=0.379 Sum_probs=52.9
Q ss_pred cCceeEEecCCCCHHHHHHHHHHcCCC--CCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccc
Q psy11398 55 STPVTACGDIHGQFEDLMYLFKKGGRI--GQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNH 124 (336)
Q Consensus 55 ~~~i~vvGDIHG~~~~l~~ll~~~~~~--~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNH 124 (336)
..+|.||||.-|+++.|.+-.+++... +-+.++++|++++-..++-|++.+...-+. .|--++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~-vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTKK-VPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCcc-CceeEEEecCCC
Confidence 468999999999999998877766443 357788999999876677888887766543 466677777765
No 113
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=77.55 E-value=2.9 Score=42.92 Aligned_cols=67 Identities=24% Similarity=0.288 Sum_probs=43.2
Q ss_pred cCceeEEecCCCCHH---------------HHHHHHHHcCCCC-CceeeccCCcccCCC------CcHHHHHHHHHhhhh
Q psy11398 55 STPVTACGDIHGQFE---------------DLMYLFKKGGRIG-QEKYLFLGDYVDRGE------YSVECISLLFAYKIK 112 (336)
Q Consensus 55 ~~~i~vvGDIHG~~~---------------~l~~ll~~~~~~~-~~~~vfLGD~vDrG~------~s~evl~~l~~Lk~~ 112 (336)
+-+|+-..|+||.+. ....++++..-.. +..+|=.||+++..+ ....++.+|-.++..
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~yD 105 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGYD 105 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCCc
Confidence 346899999999998 3333444333322 334455999998733 445567777776643
Q ss_pred CCCeEEEEcccccc
Q psy11398 113 YPNYVFLLRGNHEC 126 (336)
Q Consensus 113 ~p~~v~lLrGNHE~ 126 (336)
.+-.||||.
T Consensus 106 -----a~tiGNHEF 114 (517)
T COG0737 106 -----AMTLGNHEF 114 (517)
T ss_pred -----EEeeccccc
Confidence 466789995
No 114
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=77.18 E-value=3.8 Score=40.74 Aligned_cols=69 Identities=12% Similarity=0.182 Sum_probs=41.1
Q ss_pred CceeEEecCCCCHHHHHH---HHHHc-CCCCCceeeccCCcccCCCCcH------HHHHHHHHhh---hhCCCeEEEEcc
Q psy11398 56 TPVTACGDIHGQFEDLMY---LFKKG-GRIGQEKYLFLGDYVDRGEYSV------ECISLLFAYK---IKYPNYVFLLRG 122 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~---ll~~~-~~~~~~~~vfLGD~vDrG~~s~------evl~~l~~Lk---~~~p~~v~lLrG 122 (336)
-+++++||-=+....-.. .+... ...+.+-+|-+||-++.|..++ +..+-++.-. ..-| .+++.|
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~P--wy~vLG 104 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIP--FFTVLG 104 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCC--eEEeCC
Confidence 369999996543322222 22222 2335567788999888886643 3344444222 1123 899999
Q ss_pred cccc
Q psy11398 123 NHEC 126 (336)
Q Consensus 123 NHE~ 126 (336)
|||.
T Consensus 105 NHDy 108 (394)
T PTZ00422 105 QADW 108 (394)
T ss_pred cccc
Confidence 9996
No 115
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=76.39 E-value=8.3 Score=36.75 Aligned_cols=72 Identities=15% Similarity=0.201 Sum_probs=47.4
Q ss_pred CceeEEecCCCC----HHHHHHHHHHcC-CCC----CceeeccCCcccCC----CCc----HHHHHHHHHh-hhhCC---
Q psy11398 56 TPVTACGDIHGQ----FEDLMYLFKKGG-RIG----QEKYLFLGDYVDRG----EYS----VECISLLFAY-KIKYP--- 114 (336)
Q Consensus 56 ~~i~vvGDIHG~----~~~l~~ll~~~~-~~~----~~~~vfLGD~vDrG----~~s----~evl~~l~~L-k~~~p--- 114 (336)
.+++|+||+|=+ ++.|.++|.... ..+ ...+|+.|+++-+. ..+ .+-.+-|..+ ...||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 469999999955 577777777662 212 56799999998663 122 2333444432 22344
Q ss_pred --CeEEEEccccccc
Q psy11398 115 --NYVFLLRGNHECR 127 (336)
Q Consensus 115 --~~v~lLrGNHE~~ 127 (336)
.++++|+|-.|-.
T Consensus 108 ~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 108 EHCYLIFIPGINDPC 122 (291)
T ss_pred hcCeEEEECCCCCCC
Confidence 7899999999964
No 116
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=75.92 E-value=3.6 Score=38.99 Aligned_cols=65 Identities=17% Similarity=0.108 Sum_probs=38.0
Q ss_pred ceeEEecCCCCHHH-------------HHHHHHHc----CC-CCCceeeccCCcccCCCC-------cHHHHHHHHHhhh
Q psy11398 57 PVTACGDIHGQFED-------------LMYLFKKG----GR-IGQEKYLFLGDYVDRGEY-------SVECISLLFAYKI 111 (336)
Q Consensus 57 ~i~vvGDIHG~~~~-------------l~~ll~~~----~~-~~~~~~vfLGD~vDrG~~-------s~evl~~l~~Lk~ 111 (336)
+|.-..|+||.+.. +.++.+.. .. .++.-++..||.++.-+. ...++.++-.+..
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mgy 86 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMPY 86 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcCC
Confidence 58889999998631 22332222 11 223445569999875432 2334555555543
Q ss_pred hCCCeEEEEcccccc
Q psy11398 112 KYPNYVFLLRGNHEC 126 (336)
Q Consensus 112 ~~p~~v~lLrGNHE~ 126 (336)
=.+..||||.
T Consensus 87 -----Da~tlGNHEF 96 (282)
T cd07407 87 -----DLLTIGNHEL 96 (282)
T ss_pred -----cEEeeccccc
Confidence 3578899996
No 117
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=74.58 E-value=5 Score=38.61 Aligned_cols=65 Identities=20% Similarity=0.180 Sum_probs=41.0
Q ss_pred ceeEEecCCCCH------HHHHHHHHHcCC-----CCCceeeccCCcccCCCC-------------cHHHHHHHHHhhhh
Q psy11398 57 PVTACGDIHGQF------EDLMYLFKKGGR-----IGQEKYLFLGDYVDRGEY-------------SVECISLLFAYKIK 112 (336)
Q Consensus 57 ~i~vvGDIHG~~------~~l~~ll~~~~~-----~~~~~~vfLGD~vDrG~~-------------s~evl~~l~~Lk~~ 112 (336)
.|.-..|+||++ ..+..+++.... .++..++..||.+.-++. ...++.++-++...
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~D 81 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGVQ 81 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCCc
Confidence 366788999995 344445554422 234556679998865432 34556666666543
Q ss_pred CCCeEEEEcccccc
Q psy11398 113 YPNYVFLLRGNHEC 126 (336)
Q Consensus 113 ~p~~v~lLrGNHE~ 126 (336)
.+..||||.
T Consensus 82 -----a~tlGNHEF 90 (313)
T cd08162 82 -----AIALGNHEF 90 (313)
T ss_pred -----EEecccccc
Confidence 467899994
No 118
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=72.60 E-value=4.4 Score=45.94 Aligned_cols=66 Identities=24% Similarity=0.246 Sum_probs=40.2
Q ss_pred CceeEEecCCCCHH----------------HHHHHHHHcCCC-CCceeeccCCcccCCCC--------------cHHHHH
Q psy11398 56 TPVTACGDIHGQFE----------------DLMYLFKKGGRI-GQEKYLFLGDYVDRGEY--------------SVECIS 104 (336)
Q Consensus 56 ~~i~vvGDIHG~~~----------------~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~--------------s~evl~ 104 (336)
-+|....|+||++. .+..+++..... ++..+|-.||++...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 46999999999863 344455554332 33334449999976541 223455
Q ss_pred HHHHhhhhCCCeEEEEcccccc
Q psy11398 105 LLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 105 ~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
.+-.|.. =....||||.
T Consensus 122 ~mN~lgy-----Da~~lGNHEF 138 (1163)
T PRK09419 122 AMNALGY-----DAGTLGNHEF 138 (1163)
T ss_pred HHhhcCc-----cEEeeccccc
Confidence 5544442 3466999995
No 119
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=71.12 E-value=5.4 Score=42.32 Aligned_cols=68 Identities=16% Similarity=0.131 Sum_probs=43.2
Q ss_pred ecCceeEEecCCCCHH----------------HHHHHHHHcCCC-CCceeeccCCcccCCCCc-------------HHHH
Q psy11398 54 VSTPVTACGDIHGQFE----------------DLMYLFKKGGRI-GQEKYLFLGDYVDRGEYS-------------VECI 103 (336)
Q Consensus 54 ~~~~i~vvGDIHG~~~----------------~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s-------------~evl 103 (336)
.+-+|.-..|+||++. .+..+++..... ++..+|-.||++...+.+ ..++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 4557899999999874 334455554322 345566699999755432 1255
Q ss_pred HHHHHhhhhCCCeEEEEcccccc
Q psy11398 104 SLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 104 ~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
..+-.|.. =....||||.
T Consensus 104 ~amN~lgy-----Da~tlGNHEF 121 (649)
T PRK09420 104 KAMNTLDY-----DVGNLGNHEF 121 (649)
T ss_pred HHHHhcCC-----cEEeccchhh
Confidence 65555553 3577899995
No 120
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=70.24 E-value=5.5 Score=42.07 Aligned_cols=66 Identities=17% Similarity=0.126 Sum_probs=41.0
Q ss_pred CceeEEecCCCCHH----------------HHHHHHHHcCCC-CCceeeccCCcccCCCCc-------------HHHHHH
Q psy11398 56 TPVTACGDIHGQFE----------------DLMYLFKKGGRI-GQEKYLFLGDYVDRGEYS-------------VECISL 105 (336)
Q Consensus 56 ~~i~vvGDIHG~~~----------------~l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s-------------~evl~~ 105 (336)
-+|.-..|+||++. .+..+++..... ++..+|-.||.+...+.+ ..++..
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 35788899999974 334455554322 345566699999754322 235555
Q ss_pred HHHhhhhCCCeEEEEcccccc
Q psy11398 106 LFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 106 l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
+-.|.. =....||||.
T Consensus 83 mN~lgy-----Da~tlGNHEF 98 (626)
T TIGR01390 83 MNLLKY-----DVGNLGNHEF 98 (626)
T ss_pred HhhcCc-----cEEecccccc
Confidence 555543 3477899995
No 121
>KOG1378|consensus
Probab=69.70 E-value=5 Score=40.44 Aligned_cols=72 Identities=18% Similarity=0.084 Sum_probs=42.2
Q ss_pred cCceeEEecCCCCHHH--HHHHHHHcCCCCCceeeccCCccc-CCCC---cHHHHHHHHHhhhhCCCeEEEEcccccccc
Q psy11398 55 STPVTACGDIHGQFED--LMYLFKKGGRIGQEKYLFLGDYVD-RGEY---SVECISLLFAYKIKYPNYVFLLRGNHECRS 128 (336)
Q Consensus 55 ~~~i~vvGDIHG~~~~--l~~ll~~~~~~~~~~~vfLGD~vD-rG~~---s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~ 128 (336)
..++.|+||+==.... .+....... ..+.++++||+.- .+.. .=+-..++.-+...-| -.+.-||||...
T Consensus 147 ~~~~~i~GDlG~~~~~~s~~~~~~~~~--k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vP--ymv~~GNHE~d~ 222 (452)
T KOG1378|consen 147 PTRAAIFGDMGCTEPYTSTLRNQEENL--KPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVP--YMVCSGNHEIDW 222 (452)
T ss_pred ceeEEEEccccccccccchHhHHhccc--CCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCc--eEEecccccccC
Confidence 3469999999543332 233332222 3577889999863 2222 2234444544444445 678899999765
Q ss_pred cc
Q psy11398 129 TS 130 (336)
Q Consensus 129 ~~ 130 (336)
..
T Consensus 223 ~~ 224 (452)
T KOG1378|consen 223 PP 224 (452)
T ss_pred CC
Confidence 54
No 122
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=67.25 E-value=14 Score=34.72 Aligned_cols=32 Identities=9% Similarity=-0.035 Sum_probs=20.8
Q ss_pred EEEeeceeecCCceee-eCCCeEEEEecCCCCcc
Q psy11398 275 YICRAHQVVKEGYGPT-QAVDEVEAVFVLLDLRK 307 (336)
Q Consensus 275 ~iiRgH~~~~~G~~~~-~~~~~liTifSa~~~~~ 307 (336)
..+.|||... |.... ..+++-+.+.|.|.|.+
T Consensus 206 Vyf~Gnq~~f-~t~~~~~~~~~~v~lv~vP~Fs~ 238 (257)
T cd07387 206 VYFAGNQPKF-GTKLVEGEEGQRVLLVCVPSFSK 238 (257)
T ss_pred EEEeCCCcce-eeeEEEcCCCCeEEEEEeCCcCc
Confidence 5678888866 44432 22366777888888864
No 123
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=66.16 E-value=7.2 Score=40.41 Aligned_cols=67 Identities=19% Similarity=0.089 Sum_probs=39.1
Q ss_pred cCceeEEecCCCCHH----------HHHHHHHHcC-----CCCCceeeccCCcccCCCC-----cHHHHHHHHHhhhhCC
Q psy11398 55 STPVTACGDIHGQFE----------DLMYLFKKGG-----RIGQEKYLFLGDYVDRGEY-----SVECISLLFAYKIKYP 114 (336)
Q Consensus 55 ~~~i~vvGDIHG~~~----------~l~~ll~~~~-----~~~~~~~vfLGD~vDrG~~-----s~evl~~l~~Lk~~~p 114 (336)
+-.|.-+.|+||++. .+..+++... ..++.-+|..||++...+. ...+++++-.+...
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~D-- 111 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGYD-- 111 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCCC--
Confidence 345899999999874 2334444432 1244567779999863321 22345555555432
Q ss_pred CeEEEEcccccc
Q psy11398 115 NYVFLLRGNHEC 126 (336)
Q Consensus 115 ~~v~lLrGNHE~ 126 (336)
+.. .||||.
T Consensus 112 --a~t-lGNHEF 120 (551)
T PRK09558 112 --AMA-VGNHEF 120 (551)
T ss_pred --EEc-cccccc
Confidence 444 499994
No 124
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=65.71 E-value=12 Score=40.80 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=41.4
Q ss_pred cCceeEEecCCCCHHH----------------HHHHHHHcCCC-CCceeeccCCcccCCCCc--------------HHHH
Q psy11398 55 STPVTACGDIHGQFED----------------LMYLFKKGGRI-GQEKYLFLGDYVDRGEYS--------------VECI 103 (336)
Q Consensus 55 ~~~i~vvGDIHG~~~~----------------l~~ll~~~~~~-~~~~~vfLGD~vDrG~~s--------------~evl 103 (336)
+-+|.-..|+||++.. +..+++...-. ++..+|-.||++..-+.. ..++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 3468889999999642 33344444322 345566699998754321 1356
Q ss_pred HHHHHhhhhCCCeEEEEcccccc
Q psy11398 104 SLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 104 ~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
..|-.|.. =....||||.
T Consensus 195 ~amN~LGy-----DA~tLGNHEF 212 (814)
T PRK11907 195 AALEALGF-----DAGTLGNHEF 212 (814)
T ss_pred HHHhccCC-----CEEEechhhc
Confidence 66665553 3577899994
No 125
>KOG2310|consensus
Probab=63.92 E-value=17 Score=37.58 Aligned_cols=54 Identities=13% Similarity=0.129 Sum_probs=42.1
Q ss_pred cCceeEEecCCCC------------HHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHH
Q psy11398 55 STPVTACGDIHGQ------------FEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFA 108 (336)
Q Consensus 55 ~~~i~vvGDIHG~------------~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~ 108 (336)
..||.|-.|.|=. |..|+++|..+.....+.++.-||+++-..-|.++|-...+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~ 78 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLE 78 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHH
Confidence 3589999999954 47889999988777788888899999888777766544433
No 126
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=62.26 E-value=5.1 Score=40.43 Aligned_cols=40 Identities=30% Similarity=0.503 Sum_probs=32.7
Q ss_pred CceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEccccccc
Q psy11398 83 QEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 83 ~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
.+++=++||+.||||++-.+++.|..+. .+=+--||||.-
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDil 230 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDIL 230 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceE
Confidence 4667789999999999999999987653 366778999973
No 127
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=59.60 E-value=17 Score=37.76 Aligned_cols=64 Identities=25% Similarity=0.218 Sum_probs=38.1
Q ss_pred eeEEecCCCCHHH---------------------HHHHHHHcCC-CCCceeeccCCcccCCCC-----cHHHHHHHHHhh
Q psy11398 58 VTACGDIHGQFED---------------------LMYLFKKGGR-IGQEKYLFLGDYVDRGEY-----SVECISLLFAYK 110 (336)
Q Consensus 58 i~vvGDIHG~~~~---------------------l~~ll~~~~~-~~~~~~vfLGD~vDrG~~-----s~evl~~l~~Lk 110 (336)
|.-+.|+||++.. +..+++.... .++..++..||.+...+. ....+.++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5667788877533 3444554432 244566779999865432 233455554444
Q ss_pred hhCCCeEEEEcccccc
Q psy11398 111 IKYPNYVFLLRGNHEC 126 (336)
Q Consensus 111 ~~~p~~v~lLrGNHE~ 126 (336)
. =.+..||||.
T Consensus 83 ~-----Da~~lGNHEF 93 (550)
T TIGR01530 83 F-----DFFTLGNHEF 93 (550)
T ss_pred C-----CEEEeccccc
Confidence 2 4678899995
No 128
>KOG3947|consensus
Probab=58.38 E-value=13 Score=35.23 Aligned_cols=64 Identities=22% Similarity=0.294 Sum_probs=40.5
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhCC-CeEEEEccccccc
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYP-NYVFLLRGNHECR 127 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p-~~v~lLrGNHE~~ 127 (336)
.+++.|+|.|+...+.. ..+..+.++-+||+..-|. +-||..+=..+-. .| .+=+.|+||||..
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gs-lph~yKIVIaGNHELt 126 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGS-LPHEYKIVIAGNHELT 126 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhcc-CcceeeEEEeecccee
Confidence 46999999998765543 2455666788999976443 3444444332221 22 3456899999974
No 129
>KOG2679|consensus
Probab=51.63 E-value=10 Score=35.90 Aligned_cols=68 Identities=26% Similarity=0.338 Sum_probs=41.9
Q ss_pred CceeEEecC--CCCHHHHHHHHHHcCC---CCCceeeccCCcc-cCCCCcH---------HHHHHHHHhhhhCCCeEEEE
Q psy11398 56 TPVTACGDI--HGQFEDLMYLFKKGGR---IGQEKYLFLGDYV-DRGEYSV---------ECISLLFAYKIKYPNYVFLL 120 (336)
Q Consensus 56 ~~i~vvGDI--HG~~~~l~~ll~~~~~---~~~~~~vfLGD~v-DrG~~s~---------evl~~l~~Lk~~~p~~v~lL 120 (336)
-++.||||- +|-+..-+..++.... ...+-+|-+||-+ |-|..++ +-+----+|+. | -+.+
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQk--p--Wy~v 119 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQK--P--WYSV 119 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccccc--c--hhhh
Confidence 369999994 7888777666654322 2446677799844 6665432 22222223332 3 7899
Q ss_pred ccccccc
Q psy11398 121 RGNHECR 127 (336)
Q Consensus 121 rGNHE~~ 127 (336)
.||||.+
T Consensus 120 lGNHDyr 126 (336)
T KOG2679|consen 120 LGNHDYR 126 (336)
T ss_pred ccCcccc
Confidence 9999953
No 130
>KOG0918|consensus
Probab=49.80 E-value=0.99 Score=44.57 Aligned_cols=91 Identities=8% Similarity=-0.222 Sum_probs=67.3
Q ss_pred CceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChHHHHHhh---CCcchhhhHHhhhccC
Q psy11398 83 QEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYDECMRKY---GGVTVWKNFTDAFDYL 159 (336)
Q Consensus 83 ~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~---~~~~~~~~~~~~f~~L 159 (336)
.-..|++++..+++.+.++.+.+-...+..+-..--..++||+.. +.+..++...- +...+++..++-++.+
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccc
Confidence 345889999999999999999888888877777777889999543 22222222111 1234667778888888
Q ss_pred CceeeecCcEEEeeCCcCCc
Q psy11398 160 PLCALIDNRILCMHGGLSVK 179 (336)
Q Consensus 160 P~~~~v~~~il~vHgGi~p~ 179 (336)
+...+.+ ++++.||+..|+
T Consensus 123 l~k~i~~-~il~~~~l~~Ph 141 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPH 141 (476)
T ss_pred eeeeech-hhHhhcCCcCCc
Confidence 8888755 999999999998
No 131
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=47.88 E-value=24 Score=38.33 Aligned_cols=68 Identities=21% Similarity=0.181 Sum_probs=41.1
Q ss_pred ecCceeEEecCCCCHHH----------------HHHHHHHcCCC-CCceeeccCCcccCCCC------------------
Q psy11398 54 VSTPVTACGDIHGQFED----------------LMYLFKKGGRI-GQEKYLFLGDYVDRGEY------------------ 98 (336)
Q Consensus 54 ~~~~i~vvGDIHG~~~~----------------l~~ll~~~~~~-~~~~~vfLGD~vDrG~~------------------ 98 (336)
+.-+|.-..|+||++.. +..++++.... ++..+|-.||++.--+.
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 34569999999999632 33444444322 34556669998843221
Q ss_pred -cHHHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 99 -SVECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 99 -s~evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
...++.++-.|.. =....||||.
T Consensus 118 ~~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 118 YTHPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred cchHHHHHHhccCC-----CEEecccccc
Confidence 1235566655553 2577899994
No 132
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=47.66 E-value=56 Score=24.75 Aligned_cols=69 Identities=13% Similarity=0.046 Sum_probs=48.5
Q ss_pred CceeEEecCCCCHHHHHHHHHHcCC--CCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccc
Q psy11398 56 TPVTACGDIHGQFEDLMYLFKKGGR--IGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNH 124 (336)
Q Consensus 56 ~~i~vvGDIHG~~~~l~~ll~~~~~--~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNH 124 (336)
..+.|+=|---|.+.+..+++.+.. +....++++|+.-|.|....+....+..+...+...+++...|+
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 4567777877788999888887642 35677888999999888888777777777666667666655554
No 133
>KOG3339|consensus
Probab=42.95 E-value=1.2e+02 Score=27.19 Aligned_cols=85 Identities=18% Similarity=0.222 Sum_probs=58.1
Q ss_pred ceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccccccccccCChH----------------HHHHhhCCcc
Q psy11398 84 EKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHECRSTSQVYGFYD----------------ECMRKYGGVT 147 (336)
Q Consensus 84 ~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~~~~~~~~~f~~----------------e~~~~~~~~~ 147 (336)
..+||+| .|-+.-|++.++..|+..|-.+.+. .|+-|.|..++...|.. |..+.| -..
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 4588887 4788999999999999988776655 89999987665443322 111222 124
Q ss_pred hhhhHHhhhccCCceeeecCcEEEeeC
Q psy11398 148 VWKNFTDAFDYLPLCALIDNRILCMHG 174 (336)
Q Consensus 148 ~~~~~~~~f~~LP~~~~v~~~il~vHg 174 (336)
++..+....-++++...+--+++.+-|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 556666667777887777656776666
No 134
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=41.70 E-value=25 Score=36.90 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=33.7
Q ss_pred CceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcccccc
Q psy11398 83 QEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRGNHEC 126 (336)
Q Consensus 83 ~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrGNHE~ 126 (336)
.+++-++||+.||||.+-.+++.|+... .|=+--||||.
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDI 223 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDI 223 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcCC-----CccccccchHH
Confidence 4678889999999999999999998642 47788999997
No 135
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=37.13 E-value=1.5e+02 Score=25.56 Aligned_cols=58 Identities=19% Similarity=0.254 Sum_probs=41.2
Q ss_pred eEEecCCCCHHHHHHHHH-HcCC------------CCCceeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEE
Q psy11398 59 TACGDIHGQFEDLMYLFK-KGGR------------IGQEKYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFL 119 (336)
Q Consensus 59 ~vvGDIHG~~~~l~~ll~-~~~~------------~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~l 119 (336)
++.+-.+||-..+.+.+. .++. .....+||+|=.+|+|.-+-++..+|..|+ +.+|++
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~l 72 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVAL 72 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEE
Confidence 455666777766655443 2332 234679999999999999999999999876 345544
No 136
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=36.74 E-value=2.2e+02 Score=28.63 Aligned_cols=65 Identities=11% Similarity=0.034 Sum_probs=47.6
Q ss_pred CceeEEecCCC-CHHHHHHHHHHcCCCCCceeeccCCcccCCCCcHHHHHHHHHhhhhC-CCeEEEE
Q psy11398 56 TPVTACGDIHG-QFEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYSVECISLLFAYKIKY-PNYVFLL 120 (336)
Q Consensus 56 ~~i~vvGDIHG-~~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s~evl~~l~~Lk~~~-p~~v~lL 120 (336)
..+.||=|-++ +.+.+...|+.+...+..+++++||+...|+.+.+.-.-+...-... .+.++++
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~ 391 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV 391 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 45788889555 68888888887754445678999999999999988776666554433 4566554
No 137
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=30.05 E-value=3.1e+02 Score=25.69 Aligned_cols=59 Identities=22% Similarity=0.351 Sum_probs=33.1
Q ss_pred CCeEEEEcccccccccccccCChHHHHHhhCCcchh-hhHHhhhccCCceeeec-CcEEEeeCCcCCc
Q psy11398 114 PNYVFLLRGNHECRSTSQVYGFYDECMRKYGGVTVW-KNFTDAFDYLPLCALID-NRILCMHGGLSVK 179 (336)
Q Consensus 114 p~~v~lLrGNHE~~~~~~~~~f~~e~~~~~~~~~~~-~~~~~~f~~LP~~~~v~-~~il~vHgGi~p~ 179 (336)
..+|++|.||||.- .+..| ..++...++. ..--..+..+|++.--. .+++-.|-||-.+
T Consensus 127 nknvvvlagnhein-~ngny------~arlanhkls~gDTYnlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 127 NKNVVVLAGNHEIN-FNGNY------MARLANHKLSAGDTYNLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred ccceEEEecCceec-cCchH------HHHHhhCCCCccchhhccccccccccCcchhhhhcccCceec
Confidence 36799999999952 22222 2222211111 11223456677776532 3688899998766
No 138
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=29.94 E-value=78 Score=28.79 Aligned_cols=36 Identities=8% Similarity=-0.058 Sum_probs=28.8
Q ss_pred HHhCCceEEEeeceeecCCceeeeCCCeEEEEecCCCCc
Q psy11398 268 THFNNLAYICRAHQVVKEGYGPTQAVDEVEAVFVLLDLR 306 (336)
Q Consensus 268 l~~~~~~~iiRgH~~~~~G~~~~~~~~~liTifSa~~~~ 306 (336)
+-..|++.||-||.-+..+++. + ++++| +||--||.
T Consensus 201 l~~~G~DvIiG~H~H~~~~~e~-~-~~~~I-~YslGNfi 236 (239)
T smart00854 201 LIDAGADVVIGHHPHVLQPIEI-Y-KGKLI-AYSLGNFI 236 (239)
T ss_pred HHHcCCCEEEcCCCCcCCceEE-E-CCEEE-EEcccccc
Confidence 3346999999999999999988 5 67766 78887774
No 139
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=28.48 E-value=4.2e+02 Score=23.48 Aligned_cols=76 Identities=17% Similarity=0.170 Sum_probs=55.2
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCceeecCceeEEecCCCCHHHHHHHHHHcCCC--------------------------
Q psy11398 28 KLPESKVKHLCKKAVELLGQEKNVIVVSTPVTACGDIHGQFEDLMYLFKKGGRI-------------------------- 81 (336)
Q Consensus 28 ~l~~~~~~~l~~~a~~il~~e~~~~~~~~~i~vvGDIHG~~~~l~~ll~~~~~~-------------------------- 81 (336)
.++++++.+=+.+..+.+.++..= ...++||=++|++.-+-.+++.+.++
T Consensus 11 Lisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~kD 86 (178)
T COG0634 11 LISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILKD 86 (178)
T ss_pred eeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEecc
Confidence 688888888887777776665432 46889999999998888888776553
Q ss_pred -----CCceeeccCCcccCCCCcHHHHHHHH
Q psy11398 82 -----GQEKYLFLGDYVDRGEYSVECISLLF 107 (336)
Q Consensus 82 -----~~~~~vfLGD~vDrG~~s~evl~~l~ 107 (336)
....++++=|++|-|.-=..+.++|.
T Consensus 87 ld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 87 LDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred cccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 13468889999998765444555544
No 140
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=26.15 E-value=26 Score=35.55 Aligned_cols=40 Identities=25% Similarity=0.204 Sum_probs=29.8
Q ss_pred cchHHHHHHhCCce----EEEeeceeecC--CceeeeCCCeEEEEe
Q psy11398 261 PAITSLYTHFNNLA----YICRAHQVVKE--GYGPTQAVDEVEAVF 300 (336)
Q Consensus 261 ~~~~~~fl~~~~~~----~iiRgH~~~~~--G~~~~~~~~~liTif 300 (336)
++..++.++..|++ .||-||+++.+ |=..--++||++-|-
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVID 560 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVID 560 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEc
Confidence 44566677777776 89999999854 444556699999983
No 141
>PTZ00126 tyrosyl-tRNA synthetase; Provisional
Probab=23.99 E-value=2e+02 Score=28.63 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=27.7
Q ss_pred ccccccccCCccCHHHHHHHHHhC--CCCCHHHHHHHH
Q psy11398 3 TEISTLSKRSGNELDSWISQLEKK--IKLPESKVKHLC 38 (336)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~l~ 38 (336)
|-.++++..+.+++++=++.+.++ +.++++++.+++
T Consensus 24 ~~~~~~~~~~~~~~~e~~~~i~r~~~e~i~~eel~~~l 61 (383)
T PTZ00126 24 TGFRGSPPQSKLSLEERVKLCLSIGEECIQPEELRELL 61 (383)
T ss_pred hhcccCCCCCCCCHHHHHHHHhcCceeecCHHHHHHHH
Confidence 446778888899988877777765 377888888776
No 142
>KOG3425|consensus
Probab=23.42 E-value=2.1e+02 Score=23.88 Aligned_cols=59 Identities=22% Similarity=0.191 Sum_probs=38.5
Q ss_pred HHHHHHHHHHcCCCCCceeeccCCcccCCCCc-----HHHHHHHHHhhhhCCCeEEEEc---ccccc
Q psy11398 68 FEDLMYLFKKGGRIGQEKYLFLGDYVDRGEYS-----VECISLLFAYKIKYPNYVFLLR---GNHEC 126 (336)
Q Consensus 68 ~~~l~~ll~~~~~~~~~~~vfLGD~vDrG~~s-----~evl~~l~~Lk~~~p~~v~lLr---GNHE~ 126 (336)
+++|++.++..+....-.++|+|+-.|++-+| +.-.-.+..--..+|..+++|. ||-+.
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~ 78 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPY 78 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCc
Confidence 68899999988766666788999998886444 3322233322225677776654 66664
No 143
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=23.04 E-value=76 Score=29.63 Aligned_cols=37 Identities=27% Similarity=0.338 Sum_probs=25.0
Q ss_pred eeeccCCcccCCCCcHHHHHHHHHhhhhCCCeEEEEcc
Q psy11398 85 KYLFLGDYVDRGEYSVECISLLFAYKIKYPNYVFLLRG 122 (336)
Q Consensus 85 ~~vfLGD~vDrG~~s~evl~~l~~Lk~~~p~~v~lLrG 122 (336)
+++|+||+|.+.- -..+-..|.++|.+++..+++.-|
T Consensus 1 ~ilfigdi~g~~G-~~~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPG-RKAVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHH-HHHHHHHHHHHHHHCCCCEEEECC
Confidence 4799999996522 223667788888887755555443
No 144
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=22.20 E-value=79 Score=29.77 Aligned_cols=39 Identities=31% Similarity=0.418 Sum_probs=26.2
Q ss_pred eeeccCCcccCCCCcHH-HHHHHHHhhhhCCCeEEEEccccccc
Q psy11398 85 KYLFLGDYVDRGEYSVE-CISLLFAYKIKYPNYVFLLRGNHECR 127 (336)
Q Consensus 85 ~~vfLGD~vDrG~~s~e-vl~~l~~Lk~~~p~~v~lLrGNHE~~ 127 (336)
+++|+||++ |....+ +-..|-++|.+++..+.+. |-|..
T Consensus 2 ~ilfiGDi~--G~~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVY--GKAGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecC--CHHHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 689999999 444444 4466788888877555544 55544
No 145
>COG3207 DIT1 Pyoverdine/dityrosine biosynthesis protein [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.48 E-value=1.2e+02 Score=28.77 Aligned_cols=42 Identities=21% Similarity=0.307 Sum_probs=31.2
Q ss_pred ceeecCceeEEecCCC-------------CH-HHHHHHHHHcCCCCCceeeccCCc
Q psy11398 51 VIVVSTPVTACGDIHG-------------QF-EDLMYLFKKGGRIGQEKYLFLGDY 92 (336)
Q Consensus 51 ~~~~~~~i~vvGDIHG-------------~~-~~l~~ll~~~~~~~~~~~vfLGD~ 92 (336)
+.+..++|+||+|=|- .| +.|..+.+.++.+...+++++||.
T Consensus 101 ~Y~PG~ki~I~SDghvFsD~I~Vdddh~s~Y~d~Lr~m~~~i~~~~i~kI~n~e~~ 156 (330)
T COG3207 101 FYAPGAKITICSDGHVFSDLIRVDDDHISAYQDALRLMIEEIGATHIGKIFNLEDV 156 (330)
T ss_pred hcCCCCEEEEEeCCceehhhccccchhHHHHHHHHHHHHHHcCCCCccceeecchh
Confidence 4556778999988762 33 456667788888888999999974
No 146
>smart00526 H15 Domain in histone families 1 and 5.
Probab=20.39 E-value=3e+02 Score=19.53 Aligned_cols=51 Identities=25% Similarity=0.340 Sum_probs=37.9
Q ss_pred cccccccCCccCHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcCCCceee
Q psy11398 4 EISTLSKRSGNELDSWISQLEKKIKLPESKVKHLCKKAVELLGQEKNVIVV 54 (336)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~e~~~~~~ 54 (336)
.|.++..+.+.+...|...+..........+..++..+.+-+...-.++..
T Consensus 14 AI~~l~er~GsS~~aI~kyi~~~~~~~~~~~~~~l~~~Lk~~v~~G~l~q~ 64 (66)
T smart00526 14 AISALKERKGSSLQAIKKYIEANYKVLPNNFRSLLKLALKKLVASGKLVQV 64 (66)
T ss_pred HHHHcCCCCCCCHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHhcCceeec
Confidence 477788888889999999998875554566777888887777666666544
Done!