BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1140
(142 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|170041123|ref|XP_001848324.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864689|gb|EDS28072.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 123
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 69/113 (61%), Gaps = 24/113 (21%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV- 70
F GTLKGFDQT+NIILD+SHERVYS TAG+EQVVLGLHIIRGDN+ I ++ S S +
Sbjct: 22 FVGTLKGFDQTVNIILDESHERVYSMTAGIEQVVLGLHIIRGDNVAIIGQLDESVDSKLD 81
Query: 71 ----------PDPQLTDNFILLPQIWGIERRTLSFMRFGYRPSVD-VLHLSAS 112
P+ QLT + G+ +R R G + +D V HL+A
Sbjct: 82 FSSIRGMPLEPNLQLT--------LGGLVQRN----RLGLQALIDHVQHLAAE 122
>gi|31240533|ref|XP_320680.1| AGAP011837-PA [Anopheles gambiae str. PEST]
gi|21288006|gb|EAA00327.1| AGAP011837-PA [Anopheles gambiae str. PEST]
Length = 95
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 49/59 (83%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F GTLKGFDQT+N+ILD+SHERVYS TAG+EQVVLGLHIIRGDNI I ++ S S +
Sbjct: 22 FVGTLKGFDQTVNVILDESHERVYSMTAGIEQVVLGLHIIRGDNIAIIGQLDESVDSKL 80
>gi|170060880|ref|XP_001865997.1| LSM8 protein [Culex quinquefasciatus]
gi|167879234|gb|EDS42617.1| LSM8 protein [Culex quinquefasciatus]
Length = 95
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 49/59 (83%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F GTLKGFDQT+NIILD+SHERVYS TAG+EQVVLGLHIIRGDN+ I ++ S S +
Sbjct: 22 FVGTLKGFDQTVNIILDESHERVYSMTAGIEQVVLGLHIIRGDNVAIIGQLDESVDSKL 80
>gi|193716261|ref|XP_001944890.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Acyrthosiphon pisum]
Length = 96
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 48/59 (81%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F GTLKGFDQTINIILDDSHERVYSP GVEQ++LGLH+IRGDN+ I ++ + S +
Sbjct: 23 FVGTLKGFDQTINIILDDSHERVYSPNQGVEQIILGLHLIRGDNVAIIGEVDETMDSSI 81
>gi|307203833|gb|EFN82769.1| U6 snRNA-associated Sm-like protein LSm8 [Harpegnathos saltator]
Length = 96
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/47 (89%), Positives = 43/47 (91%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
F GTLKGFDQTINIILD+SHERVYS T GVEQVVLGLHIIRGDNI I
Sbjct: 23 FIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNIAI 69
>gi|322784412|gb|EFZ11383.1| hypothetical protein SINV_13023 [Solenopsis invicta]
Length = 102
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/47 (87%), Positives = 43/47 (91%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
F GTLKGFDQTINIILD+SHERVYS T GVEQVVLGLHIIRGDN+ I
Sbjct: 29 FIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNVAI 75
>gi|66533783|ref|XP_624537.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Apis mellifera]
gi|340726388|ref|XP_003401541.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Bombus terrestris]
gi|350423978|ref|XP_003493651.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Bombus impatiens]
gi|380024341|ref|XP_003695959.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Apis florea]
gi|383847985|ref|XP_003699633.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Megachile rotundata]
Length = 96
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/47 (87%), Positives = 43/47 (91%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
F GTLKGFDQTINIILD+SHERVYS T GVEQVVLGLHIIRGDN+ I
Sbjct: 23 FIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNVAI 69
>gi|332024909|gb|EGI65097.1| U6 snRNA-associated Sm-like protein LSm8 [Acromyrmex echinatior]
Length = 96
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 45/51 (88%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKI 62
F GTLKGFDQTIN+ILD+SHERVYS T GVEQVVLGLHIIRGDN+ I +I
Sbjct: 23 FIGTLKGFDQTINLILDESHERVYSTTQGVEQVVLGLHIIRGDNVAIVGEI 73
>gi|157104024|ref|XP_001648223.1| small nuclear ribonucleoprotein, core, putative [Aedes aegypti]
gi|108880439|gb|EAT44664.1| AAEL003985-PA [Aedes aegypti]
Length = 162
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 48/59 (81%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F GTLKGFDQTINIILD+SHERVYS AG+EQVVLGLHIIRGDN+ + ++ S S +
Sbjct: 89 FVGTLKGFDQTINIILDESHERVYSMNAGIEQVVLGLHIIRGDNVAVIGQLDESIDSKL 147
>gi|307174073|gb|EFN64760.1| U6 snRNA-associated Sm-like protein LSm8 [Camponotus floridanus]
Length = 85
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/47 (87%), Positives = 43/47 (91%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
F GTLKGFDQTINIILD+SHERVYS T GVEQVVLGLHIIRGDN+ I
Sbjct: 12 FIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNVAI 58
>gi|121543869|gb|ABM55599.1| U6 snRNA-associated Sm-like protein [Maconellicoccus hirsutus]
Length = 95
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
F GTLKGFDQT+N+ILDDSHERVYS GVEQVVLGLHIIRGDN+ I +I + S
Sbjct: 22 FVGTLKGFDQTLNVILDDSHERVYSTNQGVEQVVLGLHIIRGDNVVIVGEIDETIDS 78
>gi|156551834|ref|XP_001604291.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Nasonia vitripennis]
Length = 96
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 43/47 (91%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
F GTLKGFDQTIN+ILD+SHERVYS T GVEQVVLGLHIIRGDN+ +
Sbjct: 23 FIGTLKGFDQTINLILDESHERVYSTTQGVEQVVLGLHIIRGDNVAV 69
>gi|444520194|gb|ELV12928.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Tupaia
chinensis]
Length = 106
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 49/59 (83%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
+QGTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 33 YQGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSAL 91
>gi|281350809|gb|EFB26393.1| hypothetical protein PANDA_005681 [Ailuropoda melanoleuca]
Length = 74
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 48/59 (81%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
QGTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 1 LQGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSAL 59
>gi|91084979|ref|XP_972279.1| PREDICTED: similar to CG2021 CG2021-PA [Tribolium castaneum]
gi|270009009|gb|EFA05457.1| hypothetical protein TcasGA2_TC015638 [Tribolium castaneum]
Length = 96
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
F GTLKGFDQTIN+I+D+SHERVYS T+GVEQV+LGLHIIRGDN+ I
Sbjct: 23 FIGTLKGFDQTINVIIDESHERVYSTTSGVEQVMLGLHIIRGDNVAI 69
>gi|357622254|gb|EHJ73807.1| hypothetical protein KGM_20501 [Danaus plexippus]
Length = 96
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 46/57 (80%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
F GTLKGFDQTINIILD+SHERV+S + GV QVVLGLHIIRGDNI I +I S S
Sbjct: 23 FIGTLKGFDQTINIILDESHERVFSSSTGVAQVVLGLHIIRGDNIAIVGQIDESIDS 79
>gi|312380997|gb|EFR26852.1| hypothetical protein AND_25852 [Anopheles darlingi]
Length = 95
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 47/59 (79%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F GT+KGFDQTINIILD+SHERVYS + G+EQVVLGLHIIRGDN+ I + S S +
Sbjct: 22 FVGTMKGFDQTINIILDESHERVYSMSTGIEQVVLGLHIIRGDNVAIIGLLDESVDSKL 80
>gi|449481049|ref|XP_004177249.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Taeniopygia guttata]
Length = 132
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 49/63 (77%)
Query: 9 LIFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
+ +GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S
Sbjct: 56 ICLAEGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDS 115
Query: 69 PVP 71
+
Sbjct: 116 ALD 118
>gi|242016169|ref|XP_002428708.1| lsm1, putative [Pediculus humanus corporis]
gi|212513379|gb|EEB15970.1| lsm1, putative [Pediculus humanus corporis]
Length = 96
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 43/47 (91%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
F GTL+GFDQTIN+ILD+SHERVYS T G+EQVVLGLHIIRGDN+ +
Sbjct: 23 FVGTLRGFDQTINLILDESHERVYSQTQGIEQVVLGLHIIRGDNVAV 69
>gi|354486322|ref|XP_003505330.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cricetulus griseus]
Length = 121
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 50 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 107
>gi|355706179|gb|AES02561.1| LSM8-like protein, U6 small nuclear RNA associated [Mustela
putorius furo]
Length = 99
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 29 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 86
>gi|147904722|ref|NP_001084715.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Xenopus
laevis]
gi|46329906|gb|AAH68881.1| MGC82379 protein [Xenopus laevis]
Length = 96
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSSLD 82
>gi|7706425|ref|NP_057284.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Homo
sapiens]
gi|19527156|ref|NP_598700.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Mus
musculus]
gi|77736425|ref|NP_001029912.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos taurus]
gi|157819253|ref|NP_001100055.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Rattus
norvegicus]
gi|197102128|ref|NP_001125239.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Pongo
abelii]
gi|388453491|ref|NP_001253526.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|57096120|ref|XP_532529.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Canis lupus familiaris]
gi|126340603|ref|XP_001364736.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Monodelphis domestica]
gi|194209825|ref|XP_001501036.2| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Equus caballus]
gi|291391224|ref|XP_002712161.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8 [Oryctolagus
cuniculus]
gi|296210100|ref|XP_002751829.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Callithrix jacchus]
gi|301764070|ref|XP_002917457.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ailuropoda melanoleuca]
gi|311275562|ref|XP_003134801.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|332224269|ref|XP_003261290.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Nomascus leucogenys]
gi|332869198|ref|XP_001141412.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan troglodytes]
gi|344270905|ref|XP_003407282.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Loxodonta africana]
gi|345783317|ref|XP_003432400.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Canis lupus familiaris]
gi|348578839|ref|XP_003475189.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cavia porcellus]
gi|350595285|ref|XP_003484077.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|395539266|ref|XP_003771593.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sarcophilus harrisii]
gi|395738892|ref|XP_003777165.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Pongo abelii]
gi|395833654|ref|XP_003789838.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Otolemur garnettii]
gi|397474452|ref|XP_003808693.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan paniscus]
gi|410952710|ref|XP_003983022.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Felis catus]
gi|426227909|ref|XP_004008057.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Ovis aries]
gi|426357668|ref|XP_004046156.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Gorilla gorilla gorilla]
gi|10720071|sp|O95777.3|NAA38_HUMAN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|52783125|sp|Q6ZWM4.3|NAA38_MOUSE RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|75055136|sp|Q5RCP3.3|NAA38_PONAB RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|115312132|sp|Q3ZCE0.3|NAA38_BOVIN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|5919157|gb|AAD56232.1|AF182294_1 U6 snRNA-associated Sm-like protein LSm8 [Homo sapiens]
gi|4309884|gb|AAD15542.1| similar to Schizosaccharomyces pombe splicing factor; similar to
PID:3395591 [Homo sapiens]
gi|12803805|gb|AAH02742.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|18044123|gb|AAH19458.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|18490261|gb|AAH22440.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|26353716|dbj|BAC40488.1| unnamed protein product [Mus musculus]
gi|51095108|gb|EAL24351.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|55727417|emb|CAH90464.1| hypothetical protein [Pongo abelii]
gi|73586551|gb|AAI02500.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Bos taurus]
gi|74198481|dbj|BAE39723.1| unnamed protein product [Mus musculus]
gi|90080802|dbj|BAE89882.1| unnamed protein product [Macaca fascicularis]
gi|119603943|gb|EAW83537.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
gi|148681914|gb|EDL13861.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|149065053|gb|EDM15129.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted) [Rattus norvegicus]
gi|187469565|gb|AAI67094.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Rattus norvegicus]
gi|189065154|dbj|BAG34877.1| unnamed protein product [Homo sapiens]
gi|296488327|tpg|DAA30440.1| TPA: U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
gi|355747958|gb|EHH52455.1| hypothetical protein EGM_12900 [Macaca fascicularis]
gi|380813674|gb|AFE78711.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|383419121|gb|AFH32774.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|410208824|gb|JAA01631.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410256304|gb|JAA16119.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410288376|gb|JAA22788.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410353357|gb|JAA43282.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|431911774|gb|ELK13922.1| U6 snRNA-associated Sm-like protein LSm8 [Pteropus alecto]
gi|432103158|gb|ELK30417.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Myotis
davidii]
gi|440909990|gb|ELR59832.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos
grunniens mutus]
Length = 96
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 82
>gi|149638763|ref|XP_001516404.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ornithorhynchus anatinus]
Length = 96
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 82
>gi|109139334|gb|ABE96774.2| U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
Length = 126
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 55 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 112
>gi|118082191|ref|XP_416009.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 2 [Gallus gallus]
gi|326911334|ref|XP_003202015.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Meleagris gallopavo]
Length = 96
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 82
>gi|449481053|ref|XP_004177250.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Taeniopygia guttata]
Length = 96
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 82
>gi|196004032|ref|XP_002111883.1| hypothetical protein TRIADDRAFT_23559 [Trichoplax adhaerens]
gi|190585782|gb|EDV25850.1| hypothetical protein TRIADDRAFT_23559, partial [Trichoplax
adhaerens]
Length = 84
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 45/58 (77%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQT+N+IL+DSHERVYS AGVEQV LGL++IRGDNI + +I S +
Sbjct: 13 GTLKGFDQTVNLILNDSHERVYSSGAGVEQVALGLYVIRGDNIAVIGEIDEDVDSSID 70
>gi|301610947|ref|XP_002935003.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like, partial [Xenopus (Silurana) tropicalis]
Length = 89
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 18 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 75
>gi|119603941|gb|EAW83535.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|119603942|gb|EAW83536.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|344252438|gb|EGW08542.1| U6 snRNA-associated Sm-like protein LSm8 [Cricetulus griseus]
Length = 75
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 4 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSAL 60
>gi|195011534|ref|XP_001983196.1| GH15765 [Drosophila grimshawi]
gi|193896678|gb|EDV95544.1| GH15765 [Drosophila grimshawi]
Length = 95
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 43/47 (91%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
F GTLKGFDQTINII+D+ HERV+S TAG+EQ+VLGLHIIRGDNI +
Sbjct: 22 FIGTLKGFDQTINIIIDECHERVFSTTAGIEQIVLGLHIIRGDNIAV 68
>gi|348521232|ref|XP_003448130.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oreochromis niloticus]
gi|410918466|ref|XP_003972706.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Takifugu rubripes]
gi|432943853|ref|XP_004083300.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oryzias latipes]
Length = 96
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDS 79
>gi|225716368|gb|ACO14030.1| U6 snRNA-associated Sm-like protein LSm8 [Esox lucius]
Length = 96
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEDTDSSLD 82
>gi|209731736|gb|ACI66737.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIGEDTDSSLD 82
>gi|213513122|ref|NP_001135313.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Salmo
salar]
gi|209731702|gb|ACI66720.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732172|gb|ACI66955.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732248|gb|ACI66993.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|303665717|gb|ADM16200.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEDTDSSLD 82
>gi|225708270|gb|ACO09981.1| U6 snRNA-associated Sm-like protein LSm8 [Osmerus mordax]
Length = 96
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDS 79
>gi|209733618|gb|ACI67678.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEDTDSSLD 82
>gi|156405763|ref|XP_001640901.1| predicted protein [Nematostella vectensis]
gi|156228037|gb|EDO48838.1| predicted protein [Nematostella vectensis]
Length = 96
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 45/58 (77%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQT+N+ILDDSHERV+S +GVEQVVLGL+IIRGDNI + +I +
Sbjct: 25 GTLKGFDQTVNVILDDSHERVFSSGSGVEQVVLGLYIIRGDNIAVIGEIDDEVDGSID 82
>gi|47210706|emb|CAF89998.1| unnamed protein product [Tetraodon nigroviridis]
Length = 99
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 28 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSTLD 85
>gi|417407452|gb|JAA50336.1| Putative small nuclear ribonucleoprotein splicing factor, partial
[Desmodus rotundus]
Length = 72
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 1 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSAL 57
>gi|291238793|ref|XP_002739308.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8-like
[Saccoglossus kowalevskii]
Length = 96
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSST 66
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+IIRGDNI + +I T
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIIRGDNIAVVGEIDDET 77
>gi|351700996|gb|EHB03915.1| U6 snRNA-associated Sm-like protein LSm8 [Heterocephalus glaber]
Length = 123
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GT KGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 5 GTFKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 62
>gi|195435808|ref|XP_002065871.1| GK20525 [Drosophila willistoni]
gi|194161956|gb|EDW76857.1| GK20525 [Drosophila willistoni]
Length = 95
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 48/64 (75%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
F GTLKGFDQTINII+D+ HERV+S TAG EQ+VLGLHIIRGDNI + I + + +
Sbjct: 22 FIGTLKGFDQTINIIIDECHERVFSTTAGTEQIVLGLHIIRGDNIAVIGLIDEAIDARLD 81
Query: 72 DPQL 75
P +
Sbjct: 82 LPNI 85
>gi|195403403|ref|XP_002060279.1| GJ16072 [Drosophila virilis]
gi|194140618|gb|EDW57092.1| GJ16072 [Drosophila virilis]
Length = 95
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
F GTLKGFDQTINII+D+ HERV+S T+G+EQ+VLGLHIIRGDNI + I + S
Sbjct: 22 FIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVIGLIDDTVDS 78
>gi|24655606|ref|NP_647660.1| CG2021 [Drosophila melanogaster]
gi|194747038|ref|XP_001955961.1| GF24963 [Drosophila ananassae]
gi|194864976|ref|XP_001971199.1| GG14562 [Drosophila erecta]
gi|195336718|ref|XP_002034980.1| GM14170 [Drosophila sechellia]
gi|195490564|ref|XP_002093192.1| GE20916 [Drosophila yakuba]
gi|195587050|ref|XP_002083278.1| GD13439 [Drosophila simulans]
gi|7292155|gb|AAF47567.1| CG2021 [Drosophila melanogaster]
gi|68051537|gb|AAY85032.1| IP05684p [Drosophila melanogaster]
gi|190623243|gb|EDV38767.1| GF24963 [Drosophila ananassae]
gi|190652982|gb|EDV50225.1| GG14562 [Drosophila erecta]
gi|194128073|gb|EDW50116.1| GM14170 [Drosophila sechellia]
gi|194179293|gb|EDW92904.1| GE20916 [Drosophila yakuba]
gi|194195287|gb|EDX08863.1| GD13439 [Drosophila simulans]
gi|220951344|gb|ACL88215.1| CG2021-PA [synthetic construct]
Length = 95
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
F GTLKGFDQTINII+D+ HERV+S T+G+EQ+VLGLHIIRGDNI + I + S
Sbjct: 22 FIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVIGLIDETIDS 78
>gi|195125357|ref|XP_002007145.1| GI12774 [Drosophila mojavensis]
gi|193918754|gb|EDW17621.1| GI12774 [Drosophila mojavensis]
Length = 95
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
F GTLKGFDQTINII+D+ HERV+S T+G+EQ+VLGLHIIRGDNI + I + S
Sbjct: 22 FIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVIGLIDDTIDS 78
>gi|326666504|ref|XP_694374.3| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Danio rerio]
Length = 96
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQ IN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQAINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 82
>gi|125976760|ref|XP_001352413.1| GA15189 [Drosophila pseudoobscura pseudoobscura]
gi|195170789|ref|XP_002026194.1| GL16212 [Drosophila persimilis]
gi|54641159|gb|EAL29909.1| GA15189 [Drosophila pseudoobscura pseudoobscura]
gi|194111074|gb|EDW33117.1| GL16212 [Drosophila persimilis]
Length = 95
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
F GTLKGFDQTINII+D+ HERV+S ++G+EQ+VLGLHIIRGDNI + I S S
Sbjct: 22 FIGTLKGFDQTINIIIDECHERVFSTSSGIEQIVLGLHIIRGDNIAVIGLIDESIDS 78
>gi|224164763|ref|XP_002189792.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Taeniopygia guttata]
Length = 96
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 46/58 (79%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIERGDNVAVIGEIDEETDSALD 82
>gi|402871713|ref|XP_003899798.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Papio anubis]
Length = 96
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
GTLKGFDQTIN+ILD+SHERV+S + GV+QVVLGL+I+RGDN+ + +I T S
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVKQVVLGLYIVRGDNVAVIGEIDEETDS 79
>gi|333449461|gb|AEF33416.1| U6 snRNA-associated Sm-like protein LSm8 [Crassostrea ariakensis]
Length = 96
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 44/49 (89%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKI 62
GTLKGFDQTIN+ILD+SHERV+S T GVEQV+LGL+IIRGDN+ + +I
Sbjct: 25 GTLKGFDQTINLILDESHERVFSTTQGVEQVILGLYIIRGDNVAVIGEI 73
>gi|327273127|ref|XP_003221332.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Anolis carolinensis]
Length = 89
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 44/47 (93%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPT 60
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+++ +
Sbjct: 39 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVQVSS 85
>gi|168040498|ref|XP_001772731.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675956|gb|EDQ62445.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 98
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 42/55 (76%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
G LKGFDQ N+ILD+SHERVYS AGVEQVVLGLHIIRGDNI + ++ S
Sbjct: 27 GVLKGFDQATNLILDESHERVYSTKAGVEQVVLGLHIIRGDNIGVVGELDEELDS 81
>gi|198428544|ref|XP_002121997.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm8
[Ciona intestinalis]
Length = 96
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 48/57 (84%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
GTLKGFDQT+N+ILD+SHERV+S + GVEQV+LGL+IIRGDN+ + ++ +T + +
Sbjct: 25 GTLKGFDQTVNLILDESHERVFSSSHGVEQVMLGLYIIRGDNVAVVGEVDDTTDAAL 81
>gi|403256938|ref|XP_003921099.1| PREDICTED: ankyrin repeat domain-containing protein 7 [Saimiri
boliviensis boliviensis]
Length = 260
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 41/43 (95%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 67
>gi|321471964|gb|EFX82935.1| hypothetical protein DAPPUDRAFT_100799 [Daphnia pulex]
Length = 96
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 45/57 (78%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
F G LKGFDQTIN+I+DDSHERV+S T GVEQV LGLHIIRGDN+ + +I + S
Sbjct: 23 FIGILKGFDQTINLIIDDSHERVFSSTQGVEQVQLGLHIIRGDNVVLIGEIDNELDS 79
>gi|209736546|gb|ACI69142.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 5/62 (8%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+ + +I PD
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDED-----PDS 79
Query: 74 QL 75
L
Sbjct: 80 SL 81
>gi|355560937|gb|EHH17623.1| hypothetical protein EGK_14070 [Macaca mulatta]
Length = 96
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 47/57 (82%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
GTLKGFDQTIN+IL++SHERV+S + GV+QVVLGL+I+RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILNESHERVFSSSQGVKQVVLGLYIVRGDNVAVIGEIDEETDSAL 81
>gi|209738386|gb|ACI70062.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHE V+S + GVEQVVLGL+I+RGDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILDESHECVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEDTDSSLD 82
>gi|109077418|ref|XP_001087356.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Macaca mulatta]
Length = 96
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
GTLKGFDQTIN+IL++SHERV+S + GV+QVVLGL+I+RGDN+ + +I T S
Sbjct: 25 GTLKGFDQTINLILNESHERVFSSSQGVKQVVLGLYIVRGDNVAVIGEIDEETDS 79
>gi|327272990|ref|XP_003221266.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Anolis carolinensis]
Length = 67
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 41/43 (95%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 67
>gi|363727561|ref|XP_003640398.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Gallus gallus]
Length = 80
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 41/43 (95%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 67
>gi|209731758|gb|ACI66748.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+ GDN+ + +I T S +
Sbjct: 25 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVGGDNVVVIGEIDEDTDSSLD 82
>gi|242002636|ref|XP_002435961.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|215499297|gb|EEC08791.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|442754057|gb|JAA69188.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
gi|442754059|gb|JAA69189.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
Length = 96
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
GTLKGFDQTIN+ILD+SHERVYS GVEQV+LGL+I+RGDN+ + ++
Sbjct: 25 GTLKGFDQTINLILDESHERVYSSAHGVEQVLLGLYIVRGDNVVLVGQVDDE 76
>gi|340369040|ref|XP_003383057.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Amphimedon queenslandica]
Length = 97
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
GTLKGFDQT+NIIL +SHERVYS ++GVEQV LGL+IIRGDNI + ++ S +
Sbjct: 26 GTLKGFDQTVNIILSNSHERVYSSSSGVEQVQLGLYIIRGDNIAVIGELDEELDSEI 82
>gi|402864615|ref|XP_003896552.1| PREDICTED: ankyrin repeat and KH domain-containing protein
mask-like [Papio anubis]
Length = 504
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 41/43 (95%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
GTLKGFDQTIN+ILD+SHERV+S + GVEQVVLGL+I+RGDN+
Sbjct: 269 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 311
>gi|260814225|ref|XP_002601816.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
gi|229287118|gb|EEN57828.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
Length = 96
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
GTLKGFDQT N+ILD+SHERV+S GVEQVVLGL+IIRGDNI + +I
Sbjct: 25 GTLKGFDQTTNLILDESHERVFSSGQGVEQVVLGLYIIRGDNIAVVGEIDDD 76
>gi|443702849|gb|ELU00673.1| hypothetical protein CAPTEDRAFT_206003 [Capitella teleta]
Length = 96
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKI 62
G +KGFDQ IN+ILD+SHERVYS GVE+V+LGL+IIRGDN+ I ++
Sbjct: 23 INGVMKGFDQAINLILDESHERVYSSGGGVEEVILGLYIIRGDNVAIIGEV 73
>gi|346470191|gb|AEO34940.1| hypothetical protein [Amblyomma maculatum]
gi|346470193|gb|AEO34941.1| hypothetical protein [Amblyomma maculatum]
gi|427786053|gb|JAA58478.1| Putative small nuclear ribonucleoprotein splicing factor
[Rhipicephalus pulchellus]
Length = 96
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 42/52 (80%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
GTLKGFDQTIN+ILD+SHERVYS GVEQV LGL+I+RGDN+ + ++
Sbjct: 25 GTLKGFDQTINLILDESHERVYSSDHGVEQVPLGLYIVRGDNVVVVGQVDDE 76
>gi|357132320|ref|XP_003567778.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Brachypodium distachyon]
Length = 99
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 41/52 (78%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
GTL+GFDQ NIILD+SHERVYS GV+Q+VLGL+IIRGDNI + ++
Sbjct: 28 GTLRGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNIGVVGEVDEE 79
>gi|226529351|ref|NP_001150391.1| LOC100284021 [Zea mays]
gi|194699348|gb|ACF83758.1| unknown [Zea mays]
gi|195638896|gb|ACG38916.1| LSM Sm-like protein family member [Zea mays]
gi|195642734|gb|ACG40835.1| LSM Sm-like protein family member [Zea mays]
gi|413946381|gb|AFW79030.1| LSM Sm-like protein family member [Zea mays]
Length = 99
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
GTL+GFDQ NIILD+SHERVYS GV+Q+VLGL+IIRGDNI + ++ S
Sbjct: 28 GTLRGFDQATNIILDESHERVYSRKEGVQQLVLGLYIIRGDNISVVGEVDEELDS 82
>gi|115465821|ref|NP_001056510.1| Os05g0594900 [Oryza sativa Japonica Group]
gi|55733874|gb|AAV59381.1| unknown protein [Oryza sativa Japonica Group]
gi|113580061|dbj|BAF18424.1| Os05g0594900 [Oryza sativa Japonica Group]
Length = 99
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 41/52 (78%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
GTL+GFDQ NIILD+SHERVYS GV+Q+VLGL+IIRGDNI + ++
Sbjct: 28 GTLRGFDQATNIILDESHERVYSTREGVQQLVLGLYIIRGDNISVVGEVDEE 79
>gi|313586493|gb|ADR71257.1| U6 snRNA-associated Sm-like protein LSm8 [Hevea brasiliensis]
Length = 98
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 42/57 (73%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G LKGFDQ NIILD+SHERVYS GV+Q+VLGL+IIRGDNI I ++ S +
Sbjct: 27 GILKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISIVGELDEELDSHI 83
>gi|449439529|ref|XP_004137538.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cucumis sativus]
gi|449514856|ref|XP_004164499.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cucumis sativus]
Length = 98
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 41/55 (74%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
G LKGFDQ NIILD+SHERVYS GV+Q+VLGL+IIRGDNI I ++ S
Sbjct: 27 GVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISIVGELDEELDS 81
>gi|225454559|ref|XP_002263175.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Vitis vinifera]
gi|297737198|emb|CBI26399.3| unnamed protein product [Vitis vinifera]
Length = 98
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G LKGFDQ NIILD+SHERVYS GV+Q+VLGL+IIRGDNI I
Sbjct: 27 GVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISI 71
>gi|302790966|ref|XP_002977250.1| hypothetical protein SELMODRAFT_417143 [Selaginella
moellendorffii]
gi|300155226|gb|EFJ21859.1| hypothetical protein SELMODRAFT_417143 [Selaginella
moellendorffii]
Length = 103
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
G LKG+DQ N+I+D+SHERVYS T GVEQ VLGL+IIRGDNI + ++ S
Sbjct: 30 GMLKGYDQATNLIIDESHERVYSTTTGVEQHVLGLYIIRGDNIAVVGELDDEMES 84
>gi|351723875|ref|NP_001237294.1| uncharacterized protein LOC100305829 [Glycine max]
gi|356525792|ref|XP_003531507.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Glycine max]
gi|255626721|gb|ACU13705.1| unknown [Glycine max]
Length = 98
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
G LKGFDQ NIILD+SHERVYS GV+Q+VLGL+IIRGDNI + ++ S
Sbjct: 27 GVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISVVGELDEELDS 81
>gi|302763963|ref|XP_002965403.1| hypothetical protein SELMODRAFT_83281 [Selaginella
moellendorffii]
gi|300167636|gb|EFJ34241.1| hypothetical protein SELMODRAFT_83281 [Selaginella
moellendorffii]
Length = 91
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
G LKG+DQ N+I+D+SHERVYS T GVEQ VLGL+IIRGDNI + ++ S
Sbjct: 18 GMLKGYDQATNLIIDESHERVYSTTTGVEQHVLGLYIIRGDNIAVVGELDDEMES 72
>gi|116783050|gb|ABK22776.1| unknown [Picea sitchensis]
gi|116791884|gb|ABK26147.1| unknown [Picea sitchensis]
gi|148908711|gb|ABR17463.1| unknown [Picea sitchensis]
Length = 98
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 44/62 (70%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
G LKG+DQ N+I+D+SHERVYS GVEQ+VLGL+IIRGDNI + ++ S +
Sbjct: 27 GILKGYDQATNLIMDESHERVYSTRTGVEQLVLGLYIIRGDNISVVGELDEDLDSNLDLS 86
Query: 74 QL 75
QL
Sbjct: 87 QL 88
>gi|224059783|ref|XP_002299990.1| predicted protein [Populus trichocarpa]
gi|118484411|gb|ABK94082.1| unknown [Populus trichocarpa]
gi|222847248|gb|EEE84795.1| predicted protein [Populus trichocarpa]
Length = 98
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 40/52 (76%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
G LKGFDQ NIILD+SHERVYS GV+Q+VLGL+IIRGDNI + ++
Sbjct: 27 GVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNIGVVGELDEE 78
>gi|339248315|ref|XP_003375791.1| putative LSM domain protein [Trichinella spiralis]
gi|316970790|gb|EFV54665.1| putative LSM domain protein [Trichinella spiralis]
Length = 184
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
G +KGFDQTIN++L+DSHERVYS GVEQV LGL++IRG+NI + +I
Sbjct: 112 GIMKGFDQTINLVLEDSHERVYSMNHGVEQVPLGLYVIRGENIAVVGEIDE 162
>gi|307111678|gb|EFN59912.1| hypothetical protein CHLNCDRAFT_132948 [Chlorella variabilis]
Length = 101
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
GTL+G+DQ N+ILD+ HERVYS GVEQ+VLGL++IRGDNI + +I + +
Sbjct: 30 GTLRGYDQATNLILDECHERVYSSKNGVEQLVLGLYVIRGDNIAVIGEIDDDKDASI 86
>gi|324537696|gb|ADY49512.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Ascaris
suum]
Length = 98
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
G +KGFDQTIN++L+DSHERV+S AGVEQ+ LGL+I+RGDN+ + ++
Sbjct: 25 GLMKGFDQTINLVLEDSHERVFSEDAGVEQIPLGLYIVRGDNVAVVGELDED 76
>gi|388514443|gb|AFK45283.1| unknown [Lotus japonicus]
Length = 98
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 38/45 (84%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G LKGFDQ NIILD+SHERV+S GV+Q+VLGL+IIRGDNI +
Sbjct: 27 GVLKGFDQATNIILDESHERVFSTKEGVQQIVLGLYIIRGDNISV 71
>gi|312066607|ref|XP_003136350.1| U6 snRNA-associated Sm-like protein LSm8 [Loa loa]
gi|307768477|gb|EFO27711.1| U6 snRNA-associated Sm-like protein LSm8 [Loa loa]
Length = 98
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 40/45 (88%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G +KGFDQTIN++L+DSHERV+S AGVEQ+ LGL+I+RGDN+ +
Sbjct: 25 GLMKGFDQTINLVLEDSHERVFSEDAGVEQIPLGLYIVRGDNVAV 69
>gi|388510216|gb|AFK43174.1| unknown [Lotus japonicus]
Length = 98
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 38/45 (84%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G LKGFDQ NIILD+SHERV+S GV+Q+VLGL+IIRGDNI +
Sbjct: 27 GILKGFDQATNIILDESHERVFSTKEGVQQIVLGLYIIRGDNISV 71
>gi|297841127|ref|XP_002888445.1| hypothetical protein ARALYDRAFT_315605 [Arabidopsis lyrata subsp.
lyrata]
gi|297334286|gb|EFH64704.1| hypothetical protein ARALYDRAFT_315605 [Arabidopsis lyrata subsp.
lyrata]
Length = 590
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G LKGFDQ NIILD+SHERV+S GV+Q VLGL+IIRGDNI +
Sbjct: 519 GVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGV 563
>gi|384251155|gb|EIE24633.1| hypothetical protein COCSUDRAFT_53022 [Coccomyxa subellipsoidea
C-169]
Length = 99
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVL-GLHIIRGDNIKIPTKISSS 65
G L+G+DQ N+ILD+ HERVYS AGVEQVVL GLH++RGDNI + ++
Sbjct: 27 GILRGYDQATNLILDECHERVYSSKAGVEQVVLGGLHVVRGDNIAVVGEVDDE 79
>gi|170585854|ref|XP_001897697.1| U6 snRNA-associated Sm-like protein LSm8 [Brugia malayi]
gi|158595004|gb|EDP33581.1| U6 snRNA-associated Sm-like protein LSm8, putative [Brugia
malayi]
gi|402593521|gb|EJW87448.1| small nuclear ribonucleoprotein splicing factor [Wuchereria
bancrofti]
Length = 98
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 40/45 (88%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G +KGFDQTIN++L+DSHERV+S +GVEQ+ LGL+I+RGDN+ +
Sbjct: 25 GLMKGFDQTINLVLEDSHERVFSEDSGVEQIPLGLYIVRGDNVAV 69
>gi|401408539|ref|XP_003883718.1| U6 snRNA-associated protein LSm8-like protein,related [Neospora
caninum Liverpool]
gi|325118135|emb|CBZ53686.1| U6 snRNA-associated protein LSm8-like protein,related [Neospora
caninum Liverpool]
Length = 115
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
F GTLKGFDQ+ N+ILD ER+YS A VEQ+ LGL++IRGDNI
Sbjct: 23 FVGTLKGFDQSTNLILDKCEERIYSLDAAVEQIALGLYLIRGDNI 67
>gi|6686407|gb|AAF23841.1|AC007234_13 F1E22.8 [Arabidopsis thaliana]
Length = 583
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G LKGFDQ NIILD+SHERV+S GV+Q VLGL+IIRGDNI +
Sbjct: 512 GVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGV 556
>gi|112253325|gb|ABI14250.1| Sm-like protein [Pfiesteria piscicida]
Length = 85
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F G L+GFDQT N++L D ERV+ GVEQVVLGL++IRGDNI + ++ S +
Sbjct: 22 LFVGLLRGFDQTSNVVLSDCQERVFDTEKGVEQVVLGLYVIRGDNIAVVGEVDEEIDSRI 81
Query: 71 P 71
Sbjct: 82 D 82
>gi|15218779|ref|NP_176747.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|79320777|ref|NP_001031238.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|17979539|gb|AAL50104.1| At1g65700/F1E22_3 [Arabidopsis thaliana]
gi|20334918|gb|AAM16215.1| At1g65700/F1E22_3 [Arabidopsis thaliana]
gi|21592627|gb|AAM64576.1| small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
gi|332196292|gb|AEE34413.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|332196293|gb|AEE34414.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
Length = 98
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G LKGFDQ NIILD+SHERV+S GV+Q VLGL+IIRGDNI +
Sbjct: 27 GVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGV 71
>gi|428182006|gb|EKX50868.1| hypothetical protein GUITHDRAFT_157257 [Guillardia theta
CCMP2712]
Length = 96
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
GTLKG DQ +N+IL++ +ERV+S AGVEQV LGL+I+RGDNI I ++ S
Sbjct: 25 GTLKGLDQKLNVILEECYERVFSKEAGVEQVTLGLYIVRGDNIAIVGEVDEHKDS 79
>gi|237833195|ref|XP_002365895.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211963559|gb|EEA98754.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221488357|gb|EEE26571.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii GT1]
gi|221508860|gb|EEE34429.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii VEG]
Length = 96
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
F GTLKGFDQ+ N+ILD ER+YS A VEQ+ LGL++IRGDNI
Sbjct: 23 FVGTLKGFDQSTNLILDKCEERIYSVDAAVEQIALGLYLIRGDNI 67
>gi|392341147|ref|XP_003754265.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Rattus norvegicus]
gi|392348918|ref|XP_003750235.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Rattus norvegicus]
Length = 132
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 14 GTLKGFDQTINIILDDSHE-RVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
GTLKGFDQTIN+ LD+SHE V+S + GVEQVVLGL+I+RGDN+ + + T S +
Sbjct: 60 GTLKGFDQTINLTLDESHEWLVFSSSQGVEQVVLGLYIVRGDNVAVIGERDEETDSAL 117
>gi|256089000|ref|XP_002580607.1| lsm1 [Schistosoma mansoni]
gi|353231362|emb|CCD77780.1| putative lsm1, partial [Schistosoma mansoni]
Length = 72
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
GTLKGFD +N+++ DSHERV+SPT GVEQV LGL IIRG N+ + ++
Sbjct: 1 GTLKGFDNVVNLVIKDSHERVFSPTEGVEQVPLGLFIIRGQNVAVVGELDED 52
>gi|255075791|ref|XP_002501570.1| predicted protein [Micromonas sp. RCC299]
gi|226516834|gb|ACO62828.1| predicted protein [Micromonas sp. RCC299]
Length = 96
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 9/65 (13%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS---------S 64
G L+GFDQT N+IL++ ERVYS +GVEQ VLGL+IIRGDNI I ++ +
Sbjct: 25 GILRGFDQTTNLILEECFERVYSEDSGVEQAVLGLYIIRGDNIAIIGELDEELDAELDLA 84
Query: 65 STRSP 69
+TR+P
Sbjct: 85 NTRAP 89
>gi|255565755|ref|XP_002523867.1| lsm1, putative [Ricinus communis]
gi|223536955|gb|EEF38593.1| lsm1, putative [Ricinus communis]
Length = 98
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 39/55 (70%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
G LKGFDQ NIILD+SHERVYS GV+ VLGL+IIRGDNI I ++ S
Sbjct: 27 GILKGFDQATNIILDESHERVYSTKEGVQLHVLGLYIIRGDNISIVGELDEELDS 81
>gi|410988918|ref|XP_004000722.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Felis catus]
Length = 123
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
GTLKGFDQTIN+ILD +HE+V+S + GVE VVLGL+ + DN+ + +I T S +
Sbjct: 59 GTLKGFDQTINLILDGNHEQVFSSSQGVELVVLGLYTVTSDNVAVIGEIDEETDSAL 115
>gi|391345950|ref|XP_003747244.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Metaseiulus occidentalis]
Length = 96
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 39/45 (86%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
F GTLKGFDQTINIIL +SHERV+S GV++V +GL+IIRG+N+
Sbjct: 23 FVGTLKGFDQTINIILQESHERVFSVQDGVQKVPMGLYIIRGENV 67
>gi|348671498|gb|EGZ11319.1| hypothetical protein PHYSODRAFT_519698 [Phytophthora sojae]
Length = 88
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 41/61 (67%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
G LKGFDQ +N+ILDDS ERV+S VE V LGL+I+RGDNI + + + R V D
Sbjct: 17 GVLKGFDQCVNVILDDSFERVFSLKEPVEAVELGLYIVRGDNISVIGGVPENIREQVIDD 76
Query: 74 Q 74
Q
Sbjct: 77 Q 77
>gi|303277307|ref|XP_003057947.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460604|gb|EEH57898.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
G L+GFDQT N+ILD+ ERVYS ++GVE+ LGL+IIRGDNI + +I + +
Sbjct: 25 GVLRGFDQTTNLILDECFERVYSASSGVEEAPLGLYIIRGDNIAVIGEIDDEMDANLDYS 84
Query: 74 QL 75
Q+
Sbjct: 85 QI 86
>gi|358332137|dbj|GAA50846.1| U6 snRNA-associated Sm-like protein LSm8 [Clonorchis sinensis]
Length = 85
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
GTLKGFD IN+++ DS ERV+SPT GVEQV LGL IIRG N+ + +I
Sbjct: 14 GTLKGFDNVINLVIKDSQERVFSPTEGVEQVPLGLFIIRGQNVALVGEIDED 65
>gi|219114825|ref|XP_002178208.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409943|gb|EEC49873.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 86
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI-----PTKISSSTRS 68
G L G+DQ N+IL+D+HERVYS A VE+V LGL+++RGDN+ + TK S R
Sbjct: 15 GILTGYDQVQNLILNDAHERVYSVDADVEEVPLGLYVVRGDNVCLVAEVDETKQLDSQRV 74
Query: 69 PVPDPQL 75
P P P +
Sbjct: 75 PFPLPSI 81
>gi|308806556|ref|XP_003080589.1| Small Nuclear ribonucleoprotein splicing factor (ISS)
[Ostreococcus tauri]
gi|116059050|emb|CAL54757.1| Small Nuclear ribonucleoprotein splicing factor (ISS)
[Ostreococcus tauri]
Length = 110
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTR 67
GTL+GFDQ N+IL+D ERVYS +GVE+ LG+++IRGDN+ + +TR
Sbjct: 28 GTLRGFDQVTNVILEDCAERVYSSESGVEEAPLGVYMIRGDNVCVGDDAIDATR 81
>gi|298706362|emb|CBJ29371.1| similar to U6 snRNA-associated Sm-like protein LSm8 isoform 2
[Ectocarpus siliculosus]
Length = 119
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 13/69 (18%)
Query: 9 LIFFQGTLKGFDQTINIILDDSHERVYSPTAGVE-------------QVVLGLHIIRGDN 55
L+F+QG LKG+D TIN++L+ ER+YS + GVE QV LGL+I RGDN
Sbjct: 30 LVFYQGNLKGYDHTINLVLEGCKERIYSQSRGVEQARETGTYSSMVVQVQLGLYICRGDN 89
Query: 56 IKIPTKISS 64
I + ++
Sbjct: 90 IAVIGEVDE 98
>gi|440804396|gb|ELR25273.1| u6 snrnaassociated sm-like protein lsm8, putative [Acanthamoeba
castellanii str. Neff]
Length = 94
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
GTL+GFDQ N+I++DSHERVYS G+E+V LGL++IRGDNI + +++
Sbjct: 24 GTLRGFDQFANVIVEDSHERVYSAQ-GMEKVPLGLYVIRGDNIAVIGELNEQ 74
>gi|145349245|ref|XP_001419048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579279|gb|ABO97341.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 97
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 9/65 (13%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS---------S 64
GTL+GFDQ N+IL+D ERVYS +GVE+ LG+++IRGDN+ + + S
Sbjct: 26 GTLRGFDQVTNVILEDCAERVYSSESGVEEAPLGVYMIRGDNVALVGPVDEELDAELDLS 85
Query: 65 STRSP 69
TR+P
Sbjct: 86 ETRAP 90
>gi|301096191|ref|XP_002897193.1| hypothetical protein PITG_16975 [Phytophthora infestans T30-4]
gi|262107278|gb|EEY65330.1| hypothetical protein PITG_16975 [Phytophthora infestans T30-4]
Length = 93
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIP 59
G LKGFDQ +N+ILDDS ERV+S VE V LGL+I+RGDN+ P
Sbjct: 46 GVLKGFDQCVNVILDDSFERVFSLKEPVEAVELGLYIVRGDNMYDP 91
>gi|328865684|gb|EGG14070.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 145
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
GTL G DQT NIIL+ HER+YSP GV + LG+H+I+GD++ + +I + V
Sbjct: 24 GTLIGLDQTTNIILEKCHERIYSPDEGVTKYNLGIHLIKGDDVAVIGEIDQELDAIVVVV 83
Query: 74 QLTDNF 79
D F
Sbjct: 84 MTIDKF 89
>gi|356554080|ref|XP_003545377.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Glycine max]
Length = 116
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 15 TLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDPQ 74
LKGFDQ NIILD+SHERVYS GV Q+V GL+I RGDNI + ++ S + +
Sbjct: 47 VLKGFDQATNIILDESHERVYSTKEGV-QLVFGLYINRGDNISVVGELDEDLDSSMDFSK 105
Query: 75 L 75
L
Sbjct: 106 L 106
>gi|341882643|gb|EGT38578.1| hypothetical protein CAEBREN_11633 [Caenorhabditis brenneri]
gi|341899974|gb|EGT55909.1| hypothetical protein CAEBREN_04439 [Caenorhabditis brenneri]
Length = 98
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
G LKGFDQ IN++++D+HER YS T GV LGL+IIRG+N+ I +I
Sbjct: 25 GLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLYIIRGENVAIIGEIDEE 76
>gi|308477573|ref|XP_003101000.1| CRE-LSM-8 protein [Caenorhabditis remanei]
gi|308264344|gb|EFP08297.1| CRE-LSM-8 protein [Caenorhabditis remanei]
Length = 98
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
G LKGFDQ IN++++D+HER YS T GV LGL+IIRG+N+ I +I
Sbjct: 25 GLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLYIIRGENVAIIGEIDEE 76
>gi|17544148|ref|NP_500964.1| Protein LSM-8 [Caenorhabditis elegans]
gi|351059336|emb|CCD74179.1| Protein LSM-8 [Caenorhabditis elegans]
Length = 98
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
G LKGFDQ IN++++D+HER YS T GV LGL+IIRG+N+ I +I
Sbjct: 25 GLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLYIIRGENVAIIGEIDEE 76
>gi|268536916|ref|XP_002633593.1| C. briggsae CBR-LSM-8 protein [Caenorhabditis briggsae]
Length = 98
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
G LKGFDQ IN++++D+HER YS T GV LGL+IIRG+N+ I +I
Sbjct: 25 GLLKGFDQLINLVIEDAHERCYSETDGVLITPLGLYIIRGENVAIIGEIDEE 76
>gi|390336863|ref|XP_001199475.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Strongylocentrotus purpuratus]
Length = 90
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 30/32 (93%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVV 45
GTLKGFDQTIN+ILD+SHERVYS TA VEQVV
Sbjct: 25 GTLKGFDQTINLILDESHERVYSNTAEVEQVV 56
>gi|403160315|ref|XP_003890597.1| hypothetical protein PGTG_20884 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169505|gb|EHS63902.1| hypothetical protein PGTG_20884 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 149
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G LKGFDQT NIIL DS ERVYS +E+V LGL+I+RGD+I +
Sbjct: 78 GELKGFDQTTNIILSDSVERVYSSDEPMEEVPLGLYIVRGDHISV 122
>gi|323454589|gb|EGB10459.1| hypothetical protein AURANDRAFT_23509 [Aureococcus
anophagefferens]
Length = 107
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHII 51
G L+G+DQ N+ILD+ HERV+S AGVEQVVLGL+II
Sbjct: 25 GQLRGYDQVTNVILDECHERVFSLDAGVEQVVLGLYII 62
>gi|326437234|gb|EGD82804.1| N-alpha-acetyltransferase 38 [Salpingoeca sp. ATCC 50818]
Length = 117
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
GTL+GFDQ N+IL DS ERV S GVE V LGL+IIRGDN+
Sbjct: 73 GTLRGFDQATNLILTDSSERVVSLHEGVEVVPLGLYIIRGDNV 115
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 18/24 (75%)
Query: 11 FFQGTLKGFDQTINIILDDSHERV 34
F GTL+GFDQ N+IL DS ERV
Sbjct: 18 FIVGTLRGFDQATNLILTDSSERV 41
>gi|443924143|gb|ELU43214.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 74
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
QGTL GFDQ N++L DS ER+YS GVE+V LGL++++GD I + ++ ++ S
Sbjct: 1 MQGTLVGFDQRSNVVLSDSVERIYSIEEGVEEVPLGLYLVKGDMIALIGEMDAAIDS 57
>gi|167519032|ref|XP_001743856.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777818|gb|EDQ91434.1| predicted protein [Monosiga brevicollis MX1]
Length = 92
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
G LKGFDQ+ N+IL+ +ERV+S +GVE V +GL+I+RGDN+ + + T +
Sbjct: 18 LLTGILKGFDQSTNLILNQCYERVFSLHSGVEIVPMGLYIVRGDNVAVVGETDEETDA 75
>gi|358054578|dbj|GAA99504.1| hypothetical protein E5Q_06204 [Mixia osmundae IAM 14324]
Length = 95
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G LKGFDQT N+IL DS ERVYS VE+V LGL ++RGDN+
Sbjct: 24 GDLKGFDQTTNVILSDSIERVYSLEEPVEEVPLGLFVVRGDNV 66
>gi|395323274|gb|EJF55754.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 95
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
GT+ G+DQ N++L DS ERVYS GVE++ LGL++++GD I + ++ +T V
Sbjct: 24 GTMAGYDQKSNVVLSDSKERVYSIEEGVEEIPLGLYLVKGDQIVLIGELDEATDKAV 80
>gi|392589005|gb|EIW78336.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 95
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G L GFDQ N++L DS ERVYS GVE++ LGL++++GD I + +I + S V
Sbjct: 24 GVLAGFDQKANVVLSDSKERVYSLEEGVEEIPLGLYLVKGDMIVLIGEIDDAVDSSV 80
>gi|393232628|gb|EJD40208.1| LSM-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 95
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTL+G+DQ NI+L +S ER+YS +GV++ LGL++++GD I + ++ + VP
Sbjct: 24 GTLRGYDQKSNIVLSESVERIYSADSGVDEAQLGLYLVKGDTIALIGELDEAMDKAVP 81
>gi|412991296|emb|CCO16141.1| U6 snRNA-associated Sm-like protein LSm8 [Bathycoccus prasinos]
Length = 96
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
G L+GFDQ N+I+++ HERVYS GVE LGL+++RGDN+ + +
Sbjct: 25 GHLRGFDQQTNLIVENCHERVYSMENGVEMAPLGLYVVRGDNVALVGDVDEE 76
>gi|328859290|gb|EGG08400.1| hypothetical protein MELLADRAFT_105058 [Melampsora
larici-populina 98AG31]
Length = 124
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G LKGFDQT NIIL +S ERVYS +E+V LGL+++RGD+I +
Sbjct: 53 GDLKGFDQTTNIILSESIERVYSADEPMEEVPLGLYVVRGDHISV 97
>gi|390599071|gb|EIN08468.1| LSM-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 95
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
GTL GFDQ N++L DS ER+YS GVE+V LGL++++GD I + ++ + V
Sbjct: 24 GTLSGFDQKSNVVLSDSTERIYSTDEGVEEVPLGLYLVKGDMIALIGELDEAIDKSV 80
>gi|111226386|ref|XP_001134524.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|121962459|sp|Q1ZXD5.1|NAA38_DICDI RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=Probable U6 snRNA-associated
Sm-like protein LSm8
gi|90970532|gb|EAS66841.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 94
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
GTL+G DQTIN++L+ HERVYS G+E + LG+H+I+GD++ + ++
Sbjct: 24 GTLRGIDQTINVVLEKCHERVYSDE-GIEVIPLGVHLIKGDDVAVIGEVDDE 74
>gi|409048518|gb|EKM57996.1| hypothetical protein PHACADRAFT_251944 [Phanerochaete carnosa
HHB-10118-sp]
Length = 95
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G + GFDQ N++L DS ERVYS GVE++ LGL++++GD I + ++ + V
Sbjct: 24 GVMAGFDQKSNVVLSDSKERVYSTEEGVEEIPLGLYLVKGDQIVVIGELDEAADQAV 80
>gi|403223040|dbj|BAM41171.1| U6 snRNA-associated sm-like protein [Theileria orientalis strain
Shintoku]
Length = 94
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS 63
F G LKGFDQ N++L + ERVY P A VE++ LG++I+RGDN+ + ++
Sbjct: 23 FVGVLKGFDQLTNLVLYNCLERVYHPEAPVEELELGVYILRGDNVVLVGEVD 74
>gi|85000769|ref|XP_955103.1| U6 snRNA-associated Sm-like potein [Theileria annulata strain
Ankara]
gi|65303249|emb|CAI75627.1| U6 snRNA-associated Sm-like potein, putative [Theileria annulata]
Length = 113
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
F G LKGFDQ N++L + ERVY P A VE++ LG++++RGDN+
Sbjct: 30 FVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIYLLRGDNM 74
>gi|71027589|ref|XP_763438.1| U6 snRNA-associated Sm-like protein LSm8 [Theileria parva strain
Muguga]
gi|68350391|gb|EAN31155.1| U6 snRNA-associated Sm-like protein LSm8, putative [Theileria
parva]
Length = 94
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS 63
F G LKGFDQ N++L + ERVY P A VE++ LG++++RGDNI + ++
Sbjct: 23 FVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIYLLRGDNIVLVGEVD 74
>gi|238595225|ref|XP_002393704.1| hypothetical protein MPER_06519 [Moniliophthora perniciosa FA553]
gi|215461593|gb|EEB94634.1| hypothetical protein MPER_06519 [Moniliophthora perniciosa FA553]
Length = 112
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
QG + G+DQ N++L DS ERVYS GVE++ +GL++++GD I + +I S V
Sbjct: 40 QGVMAGYDQKSNVVLSDSKERVYSMDEGVEEIPVGLYLVKGDMIILIGEIDESVDQAV 97
>gi|218197373|gb|EEC79800.1| hypothetical protein OsI_21233 [Oryza sativa Indica Group]
Length = 136
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 37/86 (43%)
Query: 14 GTLKGFDQTINIILDDSHERVYSP------------------------------------ 37
GTL+GFDQ NIILD+SHERVYS
Sbjct: 28 GTLRGFDQATNIILDESHERVYSTRYVLVNCDLLPGLLSNALIGSLVQNSAISNKFLSWC 87
Query: 38 -TAGVEQVVLGLHIIRGDNIKIPTKI 62
GV+Q+VLGL+IIRGDNI + ++
Sbjct: 88 LKEGVQQLVLGLYIIRGDNISVVGEV 113
>gi|392561866|gb|EIW55047.1| LSM-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 95
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G + G+DQ N++L DS ERVYS GVE++ LGL++++GD I + ++ + + V
Sbjct: 24 GVMAGYDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDQIVLIGEVDEAADNAV 80
>gi|399216101|emb|CCF72789.1| unnamed protein product [Babesia microti strain RI]
Length = 99
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
F G+L+GFDQ N+IL+ S ERVY + VE++ LGL +IRGDN+ + ++ +
Sbjct: 23 FVGSLEGFDQLTNLILNQSEERVYRCNSPVERLKLGLFVIRGDNVVLIGEVDNE 76
>gi|313227657|emb|CBY22804.1| unnamed protein product [Oikopleura dioica]
Length = 96
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTR 67
G LKG DQ +N++L ++ ERV++P GV++ LGL++IRGDN+ + + +T
Sbjct: 25 GILKGLDQVVNVVLANTEERVFTPE-GVDRQALGLYLIRGDNVAVVGAVDENTE 77
>gi|296005102|ref|XP_002808886.1| u6 snRNA-associated Sm-like protein, putative [Plasmodium
falciparum 3D7]
gi|225632285|emb|CAX64164.1| u6 snRNA-associated Sm-like protein, putative [Plasmodium
falciparum 3D7]
Length = 95
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F G LKGFDQT NIIL + HER+Y + +E++ LG++IIRGD + + +I +
Sbjct: 23 IFTGKLKGFDQTTNIILGNCHERIYKES--MEKISLGVYIIRGDTVTLIGEIDEDVDKNI 80
>gi|403412868|emb|CCL99568.1| predicted protein [Fibroporia radiculosa]
Length = 95
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G + G+DQ N++L DS ERVYS GVE++ LGL++++GD I + ++ + V
Sbjct: 24 GVMAGYDQKSNVVLSDSKERVYSADEGVEEIPLGLYLVKGDQIVLIGEVDEAIDQSV 80
>gi|449544647|gb|EMD35620.1| hypothetical protein CERSUDRAFT_116344 [Ceriporiopsis
subvermispora B]
Length = 95
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G + GFDQ N++L DS ERVYS GVE++ LGL++++GD I + ++ + V
Sbjct: 24 GVMAGFDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDQIVLIGELDDAVDQSV 80
>gi|222632782|gb|EEE64914.1| hypothetical protein OsJ_19774 [Oryza sativa Japonica Group]
Length = 136
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 37/86 (43%)
Query: 14 GTLKGFDQTINIILDDSHERVYSP------------------------------------ 37
GTL+GFDQ NIILD+SHERVYS
Sbjct: 28 GTLRGFDQATNIILDESHERVYSTRYVLVNCDLLPGLLSNALIGSLVQNSAISNKFLSWC 87
Query: 38 -TAGVEQVVLGLHIIRGDNIKIPTKI 62
GV+Q+VLGL+IIRGDNI + ++
Sbjct: 88 LKDGVQQLVLGLYIIRGDNISVVGEV 113
>gi|281200600|gb|EFA74818.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 103
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIK--IPTKISSS 65
GTL+G DQ IN+IL+ HER+Y+ GVE LG+HII+GD++ +KI SS
Sbjct: 27 GTLRGLDQMINVILEHCHERIYTD-EGVEIFNLGVHIIKGDDVNHCCTSKIYSS 79
>gi|170100064|ref|XP_001881250.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643929|gb|EDR08180.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 95
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G L GFDQ N++L DS ERVYS GVE++ LGL++++GD I + +I + V
Sbjct: 24 GVLAGFDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDMIVLIGEIDDALDQSV 80
>gi|403412047|emb|CCL98747.1| predicted protein [Fibroporia radiculosa]
Length = 439
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G + G+DQ N++L DS ERVYS GVE++ LGL++++GD I
Sbjct: 368 GVMAGYDQKSNVVLSDSKERVYSADEGVEEIPLGLYLVKGDQI 410
>gi|313222638|emb|CBY41662.1| unnamed protein product [Oikopleura dioica]
Length = 83
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTR 67
G LKG DQ +N++L ++ ERV++P GV++ LGL++IRGDN+ + + +T
Sbjct: 12 GILKGLDQVVNVVLANTEERVFTPE-GVDRQALGLYLIRGDNVAVVGAVDENTE 64
>gi|409076971|gb|EKM77339.1| hypothetical protein AGABI1DRAFT_115264 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 95
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G + GFDQ NI+L D ERV+S GVE++ LGL++++GD I + ++ S V
Sbjct: 24 GVMAGFDQRSNIVLSDCKERVFSMDEGVEEIALGLYLVKGDMISLIGELDEEIDSSV 80
>gi|336388555|gb|EGO29699.1| hypothetical protein SERLADRAFT_378975 [Serpula lacrymans var.
lacrymans S7.9]
Length = 95
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G + GFDQ N++L DS ERVYS GVE++ LGL++++GD I + +I V
Sbjct: 24 GIMAGFDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDMIVLIGEIDDEADQAV 80
>gi|426195314|gb|EKV45244.1| hypothetical protein AGABI2DRAFT_194226 [Agaricus bisporus var.
bisporus H97]
Length = 95
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G + GFDQ NI+L D ERV+S GVE++ LGL++++GD I + ++ S V
Sbjct: 24 GVMAGFDQRSNIVLSDCKERVFSMDEGVEEIALGLYLVKGDMISLIGELDEEIDSSV 80
>gi|302680881|ref|XP_003030122.1| hypothetical protein SCHCODRAFT_16460 [Schizophyllum commune
H4-8]
gi|300103813|gb|EFI95219.1| hypothetical protein SCHCODRAFT_16460 [Schizophyllum commune
H4-8]
Length = 95
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G L GFDQ NIIL + ERVYS GVE++ LGL+I++GD I + +I + + +
Sbjct: 24 GVLAGFDQKSNIILSECRERVYSMDEGVEEIPLGLYIVKGDMICLIGEIDNDRDAAI 80
>gi|389582364|dbj|GAB65102.1| U6 snRNA-associated Sm-like protein LSm8 [Plasmodium cynomolgi
strain B]
Length = 95
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F G LKGFDQT NIIL + +ER+Y + +E++ LGL+IIRGD + + +I +
Sbjct: 23 IFTGKLKGFDQTTNIILGNCYERIYKES--LEKISLGLYIIRGDTVTLIGEIDEDVDKNI 80
>gi|221053308|ref|XP_002258028.1| u6 snrna-associated sm-like protein [Plasmodium knowlesi strain
H]
gi|193807861|emb|CAQ38565.1| u6 snrna-associated sm-like protein, putative [Plasmodium
knowlesi strain H]
Length = 95
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F G LKGFDQT NIIL + +ER+Y + +E++ LGL+IIRGD + + +I +
Sbjct: 23 IFTGKLKGFDQTTNIILGNCYERIYKES--LEKISLGLYIIRGDTVTLIGEIDEDVDKNI 80
>gi|156097675|ref|XP_001614870.1| U6 snRNA-associated Sm-like protein LSm8 [Plasmodium vivax Sal-1]
gi|148803744|gb|EDL45143.1| U6 snRNA-associated Sm-like protein LSm8, putative [Plasmodium
vivax]
Length = 95
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F G LKGFDQT NIIL + +ER+Y + +E++ LGL+IIRGD + + +I +
Sbjct: 23 IFTGKLKGFDQTTNIILGNCYERIYKES--LEKISLGLYIIRGDTVTLIGEIDEDVDKNI 80
>gi|397601457|gb|EJK57913.1| hypothetical protein THAOC_22004 [Thalassiosira oceanica]
Length = 527
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
GTL G+DQ N+IL S ERVYS + VE V LGL ++RGDN+ I
Sbjct: 25 GTLAGYDQLQNLILSRSSERVYSVDSPVEVVELGLFVVRGDNVAI 69
>gi|452824963|gb|EME31962.1| U6 snRNA-associated Sm-like protein LSm8 [Galdieria sulphuraria]
Length = 95
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
G LKGFDQ+ N+IL+ + ER++ +++V +GL+++RGD+I I ++ + S
Sbjct: 24 GILKGFDQSCNVILESTVERIFGTDVAMQEVAVGLYVLRGDDIAILGELDAEKESETDFQ 83
Query: 74 QL 75
Q+
Sbjct: 84 QI 85
>gi|242207843|ref|XP_002469774.1| predicted protein [Postia placenta Mad-698-R]
gi|220731194|gb|EED85041.1| predicted protein [Postia placenta Mad-698-R]
Length = 95
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G + G+DQ N++L D+ ERVYS GVE++ LGL++++GD I + ++ + V
Sbjct: 24 GVMAGYDQKSNVVLSDTKERVYSMEEGVEEIPLGLYLVKGDQIVLIAELDDALDQSV 80
>gi|321249860|ref|XP_003191600.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus gattii
WM276]
gi|317458067|gb|ADV19813.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
gattii WM276]
Length = 95
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G LKG+D N+IL DS ER +S GVE V LGL++I+GDN+ + ++ S +
Sbjct: 24 GKLKGYDPRTNLILSDSVEREFSMEQGVEMVPLGLYVIKGDNVAVVAELDEEKDSTI 80
>gi|320170227|gb|EFW47126.1| hypothetical protein CAOG_05070 [Capsaspora owczarzaki ATCC
30864]
Length = 95
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
F GTL+GFDQ NIIL+ + ER ++ GV V LGL+II+G+NI +
Sbjct: 21 IFVGTLRGFDQMCNIILEHTVEREFNAQRGVVIVALGLYIIKGENIAV 68
>gi|405117913|gb|AFR92688.1| hypothetical protein CNAG_00557 [Cryptococcus neoformans var.
grubii H99]
Length = 95
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G LKG+D N+IL DS ER +S GVE + LGL++I+GDN+ + ++ S +
Sbjct: 24 GKLKGYDPRTNLILSDSVEREFSMEQGVEMIPLGLYVIKGDNVAVVAELDEEKDSTI 80
>gi|169851696|ref|XP_001832537.1| hypothetical protein CC1G_03551 [Coprinopsis cinerea
okayama7#130]
gi|116506391|gb|EAU89286.1| hypothetical protein CC1G_03551 [Coprinopsis cinerea
okayama7#130]
Length = 95
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L GFDQ N++L DS ERV+S GVE++ LGL++++GD I
Sbjct: 24 GLLAGFDQKSNVVLSDSKERVFSTDEGVEEIPLGLYLVKGDMI 66
>gi|58258887|ref|XP_566856.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus neoformans
var. neoformans JEC21]
gi|134107025|ref|XP_777825.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260523|gb|EAL23178.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222993|gb|AAW41037.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 95
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G LKG+D N+IL DS ER +S GVE + LGL++I+GDN+ + ++ S +
Sbjct: 24 GKLKGYDPRTNLILSDSVEREFSMDQGVEMIPLGLYVIKGDNVAVVAELDEEKDSTI 80
>gi|389747909|gb|EIM89087.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 95
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
G + G+DQ N++L DS ERVYS GVE++ LGL++++GD I + +I
Sbjct: 24 GIMAGYDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDMIILIGEIDEE 75
>gi|401882753|gb|EJT46997.1| u6 snRNA-associated sm-like protein lsm8 [Trichosporon asahii var.
asahii CBS 2479]
Length = 166
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKI 62
G LKG D N+IL DS ER YS GVE + LGL++I+GDN+ + ++
Sbjct: 95 GRLKGNDNYCNLILSDSVEREYSADKGVEMISLGLYMIKGDNVALIAEV 143
>gi|393213825|gb|EJC99320.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 95
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G L GFDQ +I+L D ER+YS GVE+V LGL++++GD I + ++ + V
Sbjct: 24 GVLAGFDQRSDIVLSDCVERIYSMEEGVEEVPLGLYLVKGDQILLIGELDEALDKAV 80
>gi|388580917|gb|EIM21228.1| hypothetical protein WALSEDRAFT_7029, partial [Wallemia sebi CBS
633.66]
Length = 80
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
G L+G+D NIIL S ERV+S GV+ V LGL++I+GDN+ ++I ++
Sbjct: 14 GHLQGYDNNSNIILSQSFERVFSSDQGVQTVDLGLYLIKGDNLVCASEIDTT 65
>gi|406700597|gb|EKD03763.1| u6 snRNA-associated sm-like protein lsm8 [Trichosporon asahii
var. asahii CBS 8904]
Length = 129
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPT 60
G LKG D N+IL DS ER YS GVE + LGL++I+GDN+ T
Sbjct: 24 GRLKGNDNYCNLILSDSVEREYSADKGVEMISLGLYMIKGDNVGGTT 70
>gi|294888449|ref|XP_002772471.1| lsm1, putative [Perkinsus marinus ATCC 50983]
gi|294896670|ref|XP_002775673.1| lsm1, putative [Perkinsus marinus ATCC 50983]
gi|239876697|gb|EER04287.1| lsm1, putative [Perkinsus marinus ATCC 50983]
gi|239881896|gb|EER07489.1| lsm1, putative [Perkinsus marinus ATCC 50983]
Length = 113
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G GFDQ++N++L + ERVYS GVE + GL+++RGD++
Sbjct: 42 GKFNGFDQSLNVVLSECKERVYSTVEGVETLHHGLYLVRGDDV 84
>gi|428671909|gb|EKX72824.1| U6 snRNA-associated Sm-like protein LSm8, putative [Babesia equi]
Length = 94
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS 63
F G LKGFDQ N++L + ERVY + VE++ LG++++RGDN+ + ++
Sbjct: 23 FVGVLKGFDQLTNLVLYNCIERVYHVDSPVEELELGIYVVRGDNVVLVGEVD 74
>gi|159473465|ref|XP_001694854.1| Sm protein [Chlamydomonas reinhardtii]
gi|158276233|gb|EDP02006.1| Sm protein [Chlamydomonas reinhardtii]
Length = 100
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVL--GLHIIRGDNIKIPTKISSSTRSP 69
+ G L+G+DQT N++L + ERVYS +GV QV+ G++ IRGDN+ I ++
Sbjct: 26 YVGVLRGYDQTWNLLLQECQERVYSAKSGV-QVIQNPGIYCIRGDNVAIVGEVDEEADGA 84
Query: 70 V 70
V
Sbjct: 85 V 85
>gi|357016875|gb|AET50466.1| hypothetical protein [Eimeria tenella]
Length = 97
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F GTL FDQ+ NI+L+ E+V A VE V LGL+++RGDNI + ++ +
Sbjct: 22 LFMGTLIAFDQSTNIVLNKCAEKVVHEDAPVEIVPLGLYLLRGDNIAVVGQVDEDVEKSI 81
>gi|224005396|ref|XP_002296349.1| human U6 snRNA-associated protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
gi|209586381|gb|ACI65066.1| human U6 snRNA-associated protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 106
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G L G+DQ N+IL S+E VYS + VE+V LGL ++RGDN+ +
Sbjct: 22 LITGILLGYDQLQNLILQKSYESVYSSDSPVEKVELGLFVVRGDNVAV 69
>gi|443897860|dbj|GAC75199.1| hypothetical protein PANT_14d00082 [Pseudozyma antarctica T-34]
Length = 160
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
GTL+G D +IIL S ER++SP GVE+V LGL+I+RGD I
Sbjct: 24 GTLRGSDAVGSIILAASVERIFSPDEGVEEVPLGLYILRGDAI 66
>gi|334183663|ref|NP_001185323.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|332196294|gb|AEE34415.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
Length = 141
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 43/105 (40%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTA---------------------------------- 39
G LKGFDQ NIILD+SHERV+S
Sbjct: 27 GVLKGFDQATNIILDESHERVFSTKCHLFNRILRKLTQIFKIGLVLQFFVCMSGHVDTSL 86
Query: 40 ---------GVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDPQL 75
GV+Q VLGL+IIRGDNI + ++ + + +L
Sbjct: 87 DKCSWIFLEGVQQHVLGLYIIRGDNIGVIGELDEELDASLDFSKL 131
>gi|19076009|ref|NP_588509.1| U6 snRNP-associated protein Lsm8 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|59799781|sp|O74483.1|LSM8_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm8
gi|3395591|emb|CAA20133.1| U6 snRNP-associated protein Lsm8 (predicted) [Schizosaccharomyces
pombe]
Length = 94
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G+LKGFD T N+IL DS ER+ S +E + LG++++RG+N+ + ++ S +
Sbjct: 23 GSLKGFDHTTNLILSDSFERIISMDQDMETIPLGVYLLRGENVAMVGLVNEELDSEIE 80
>gi|213404570|ref|XP_002173057.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
gi|212001104|gb|EEB06764.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
Length = 94
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G+L+GFDQT N+IL +S ER+ S E + LGL+IIRG+N+ +
Sbjct: 23 GSLRGFDQTTNLILSNSKERLISWDQETEVIPLGLYIIRGENVAM 67
>gi|224004692|ref|XP_002295997.1| human U6 snRNA-associated Sm-like protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
gi|209586029|gb|ACI64714.1| human U6 snRNA-associated Sm-like protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 106
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G L G+DQ N+IL S+E VYS + VE+V LGL ++RGDN+ +
Sbjct: 22 LITGILLGYDQLQNLILQKSYESVYSLDSPVEKVELGLFVVRGDNVAV 69
>gi|340500920|gb|EGR27754.1| U6 snRNA-associated SM protein LSM8, putative [Ichthyophthirius
multifiliis]
Length = 106
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G LKG DQ +N +L + ERVYS GV+ +GL+++RGDN+
Sbjct: 35 GILKGLDQALNSVLSECTERVYSLEQGVQFNKIGLYVLRGDNV 77
>gi|319411566|emb|CBQ73610.1| related to LSM8-Component of small nuclear ribonucleoprotein
complexes involved in RNA processing and splicing
[Sporisorium reilianum SRZ2]
Length = 96
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
GTL+G D +IIL S ER++S GVE+V LGL+I+RGD+I
Sbjct: 24 GTLRGSDAVGSIILASSVERIFSADEGVEEVPLGLYILRGDSI 66
>gi|402222121|gb|EJU02188.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 98
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI----KIPTKISSS 65
GTL GFD +I+L + ER YSP VE+V LGL++++GD I ++ T++ +S
Sbjct: 24 GTLAGFDNRSDIVLSNCIERTYSPDEPVEEVSLGLYLVKGDMILLVGELDTELEAS 79
>gi|302837889|ref|XP_002950503.1| hypothetical protein VOLCADRAFT_90948 [Volvox carteri f.
nagariensis]
gi|300264052|gb|EFJ48249.1| hypothetical protein VOLCADRAFT_90948 [Volvox carteri f.
nagariensis]
Length = 100
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVL--GLHIIRGDNIKIPTKISSSTRS 68
+ G L+G+DQ N++L + ERVYS +GV Q++ G++ IRGDN+ + ++ S
Sbjct: 25 HYVGILRGYDQATNLLLQECQERVYSTKSGV-QIIQNPGVYCIRGDNVAVVGEVDEEADS 83
>gi|330842842|ref|XP_003293378.1| hypothetical protein DICPUDRAFT_90215 [Dictyostelium purpureum]
gi|325076293|gb|EGC30091.1| hypothetical protein DICPUDRAFT_90215 [Dictyostelium purpureum]
Length = 94
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
G L+G DQT N+IL+ ERV+S G+E + LG+H+I+GD++ + ++
Sbjct: 24 GILRGTDQTTNVILEKCEERVFS-DEGIEVIPLGVHLIKGDDVAVIGEVDEE 74
>gi|209878201|ref|XP_002140542.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209556148|gb|EEA06193.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 98
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGV-EQVVLGLHIIRGDNIKIPTKISSS--TRS 68
+ G+LKG+DQ NIIL E+VY + V + + LGL +IRGD+I + +I S +S
Sbjct: 23 YIGSLKGYDQLTNIILAKCREKVYEANSKVIKYIELGLFLIRGDSIALIGEIESEDPVKS 82
Query: 69 PVPDPQ 74
+ + +
Sbjct: 83 AISEEE 88
>gi|156083833|ref|XP_001609400.1| U6 snRNA-associated Sm-like protein LSm8 [Babesia bovis T2Bo]
gi|154796651|gb|EDO05832.1| U6 snRNA-associated Sm-like protein LSm8, putative [Babesia
bovis]
Length = 94
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS 63
F G LKGFDQ N++L + ERV+ E + LG+++IRGDNI + ++
Sbjct: 23 FIGDLKGFDQVTNLVLYNCVERVFRKGVPFEDLPLGIYLIRGDNIALVGEVD 74
>gi|146168016|ref|XP_001470817.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|146145232|gb|EDK31689.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 107
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G LKG DQ +N IL D ERV+S + + GL+++RGDNI + ++ + +
Sbjct: 37 GILKGLDQALNSILSDCVERVFSSENNTKTIKHGLYLLRGDNIAVLGEVDEEIENQI 93
>gi|328766541|gb|EGF76595.1| hypothetical protein BATDEDRAFT_92607 [Batrachochytrium
dendrobatidis JAM81]
Length = 97
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G L+GFDQT N+IL + ER++S G + + LGL+++RGD+I +
Sbjct: 24 GKLEGFDQTTNLILSSAKERIFS-GEGSQDLPLGLYVVRGDSITV 67
>gi|388854537|emb|CCF51924.1| related to LSM8-Component of small nuclear ribonucleoprotein
complexes involved in RNA processing and splicing
[Ustilago hordei]
Length = 96
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 10/73 (13%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI----------PTKIS 63
G LKG D +IIL +S ER++S GVE++ LGL+I+RGD I + +S
Sbjct: 24 GLLKGSDSVGSIILANSVERIFSSDQGVEELPLGLYILRGDGISLVGQLDVEKDKEVDLS 83
Query: 64 SSTRSPVPDPQLT 76
S P+P+ + T
Sbjct: 84 SVLAEPIPETRHT 96
>gi|392575745|gb|EIW68877.1| hypothetical protein TREMEDRAFT_39244 [Tremella mesenterica DSM
1558]
Length = 94
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G L+G+D N+IL D ER YS GVE V LGL++I+GDN+ I ++ +
Sbjct: 24 GKLRGYDPRTNLILSDCVEREYS-LEGVEMVPLGLYMIKGDNVAIIGEMDEDKDGSI 79
>gi|50546088|ref|XP_500571.1| YALI0B06534p [Yarrowia lipolytica]
gi|49646437|emb|CAG82802.1| YALI0B06534p [Yarrowia lipolytica CLIB122]
Length = 97
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+DQ N+IL ++ ERV +P E V LGL+++RGD I
Sbjct: 24 GILQGYDQATNVILSNTRERVITPDEPTEVVDLGLYMLRGDCI 66
>gi|299755579|ref|XP_001828752.2| hypothetical protein CC1G_06738 [Coprinopsis cinerea
okayama7#130]
gi|298411289|gb|EAU93018.2| hypothetical protein CC1G_06738 [Coprinopsis cinerea
okayama7#130]
Length = 116
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPD 72
G L+ +DQ N++L+D++ER+Y EQ GL +IRG+N+ + +I VP
Sbjct: 12 HGVLRSYDQFANLVLEDTYERIYHRNMFAEQ-HHGLFLIRGENVVLMGEIDLDKEDDVPL 70
Query: 73 PQLTDNFILLPQIWGIERRTLS 94
Q+ + + I +E + L
Sbjct: 71 KQVEYHQLEPYHIKELEHKKLH 92
>gi|70944071|ref|XP_742007.1| u6 snRNA-associated sm-like protein [Plasmodium chabaudi
chabaudi]
gi|56520743|emb|CAH81648.1| u6 snRNA-associated sm-like protein, putative [Plasmodium
chabaudi chabaudi]
Length = 65
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 20 DQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
DQT NIIL + +ER+Y + +E++ LG++IIRGDN+ + +I
Sbjct: 1 DQTTNIILGNCYERIYKES--LEKISLGIYIIRGDNVTLIGEIDEE 44
>gi|344301944|gb|EGW32249.1| hypothetical protein SPAPADRAFT_50817 [Spathaspora passalidarum
NRRL Y-27907]
Length = 101
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGV----EQVVLGLHIIRGDNIKIPTKISSST 66
FF+G L+G+D + NIIL D ER+ V +++ LGL+IIRG + +I +
Sbjct: 21 FFEGVLQGYDNSTNIILQDCIERILYSEEDVDEENQEIPLGLYIIRGGEVACVGEIDPAK 80
Query: 67 RSPV 70
+ +
Sbjct: 81 YATI 84
>gi|348673586|gb|EGZ13405.1| hypothetical protein PHYSODRAFT_316685 [Phytophthora sojae]
Length = 122
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ FDQ NIIL+D++ER + + + LGL+IIRGDNI + ++ S P
Sbjct: 31 GYLRSFDQYSNIILEDTYERHVAGGLFCD-IELGLNIIRGDNIVLLGELDSDKERDQP 87
>gi|328354479|emb|CCA40876.1| U6 snRNA-associated Sm-like protein LSm8 [Komagataella pastoris
CBS 7435]
Length = 98
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+GFD + NIIL+ + ERV+ T + + LGL ++RG+N+
Sbjct: 24 GILQGFDVSTNIILEKAQERVFHLTEETQTIDLGLFLLRGNNV 66
>gi|301108017|ref|XP_002903090.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097462|gb|EEY55514.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 102
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ FDQ NIIL+D++ER + + + LGL+IIRGDNI + ++ S P
Sbjct: 11 GYLRSFDQYSNIILEDTYERHVAGGLFCD-IELGLNIIRGDNIVLLGELDSDKERDQP 67
>gi|378729237|gb|EHY55696.1| hypothetical protein HMPREF1120_03821 [Exophiala dermatitidis
NIH/UT8656]
Length = 98
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVE---QVVLGLHIIRGDNIKI 58
GTL DQ NI+L+D+ ER+ PT E QV GL+++RGDNI I
Sbjct: 23 GTLLSCDQVTNIVLNDTVERIIRPTDDPEPSSQVSHGLYLVRGDNITI 70
>gi|395334284|gb|EJF66660.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 136
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
QG L+ +DQ N++L+D+ ER+Y E V GL +IRG+N+ + +I +P
Sbjct: 31 LQGVLRSYDQFANLVLEDTVERIYHQDVFAE-VWRGLFLIRGENVVLLGEIDLDQEDEIP 89
>gi|448532461|ref|XP_003870428.1| hypothetical protein CORT_0F00690 [Candida orthopsilosis Co
90-125]
gi|380354783|emb|CCG24298.1| hypothetical protein CORT_0F00690 [Candida orthopsilosis]
Length = 101
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGV----EQVVLGLHIIRGDNI 56
FF+G L+GFD+ NIIL +S ER+ T + E++ G++I+RG+ I
Sbjct: 21 FFEGVLEGFDKNTNIILSNSIERIIYSTQEIDETNEEIPSGVNIMRGNEI 70
>gi|389751358|gb|EIM92431.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 136
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L+++ ER+YS ++ V GL++IRG+N+ + +I +P
Sbjct: 31 LHGVLRSYDQFANLVLEETIERIYSKNHYADKYV-GLYLIRGENVVLLGEIDLDEEDEIP 89
>gi|353237612|emb|CCA69581.1| hypothetical protein PIIN_03520 [Piriformospora indica DSM 11827]
Length = 98
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
G L G+DQ NI+L D ER +S +G LG+++++GD I + ++ ++
Sbjct: 24 GNLVGWDQRSNIVLADCVERRFSQESGATDSALGVYMVKGDQICLVGEVDAA 75
>gi|392571535|gb|EIW64707.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 136
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
QG L+ +DQ N++L+D+ ER+Y E + GL +IRG+N+ + +I VP
Sbjct: 31 LQGVLRSYDQFANLVLEDTVERIYHQDVFAE-MWRGLFLIRGENVVLLGEIDLDQEDEVP 89
>gi|241955685|ref|XP_002420563.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
gi|223643905|emb|CAX41642.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
Length = 102
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
Query: 11 FFQGTLKGFDQTINIILDDSHER-VYSPT---AGVEQVVLGLHIIRGDNI 56
FF+G L+G+D++ NIIL + ER +YS E++ LG++I+RG+ I
Sbjct: 21 FFEGKLEGYDKSTNIILSNCIERIIYSKDDEGEENEEISLGVYIMRGNEI 70
>gi|449019941|dbj|BAM83343.1| similar to Sm-like protein LSm1 [Cyanidioschyzon merolae strain
10D]
Length = 124
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
FF G L+ FDQ N+ L+D+ ERV + GL + RG+N+ + + S R
Sbjct: 22 FFLGYLRSFDQYGNLTLEDATERVVVNDEAFADIPRGLQVFRGENVVLFGAVDSEQRE 79
>gi|402469076|gb|EJW04137.1| hypothetical protein EDEG_01573 [Edhazardia aedis USNM 41457]
Length = 105
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIP--TKISSSTRS 68
+ G L+ FDQ +I L+++ ERV++ E+ GL+I+RG+NI I T + ST
Sbjct: 33 YLYGKLRSFDQYNSITLENTIERVFNNGKYTERKC-GLYIVRGENIVIIGLTNLKLSTSD 91
Query: 69 PVPDPQLTDN 78
V Q +N
Sbjct: 92 KVSQEQFLEN 101
>gi|409051525|gb|EKM61001.1| hypothetical protein PHACADRAFT_247289 [Phanerochaete carnosa
HHB-10118-sp]
Length = 116
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L+D+ ER+Y E + GL++IRG+N+ + +I VP
Sbjct: 11 LHGVLRSYDQFANLVLEDTVERIYHQDVYAE-MKRGLYLIRGENVVLLGEIDLDQEDDVP 69
Query: 72 DPQL 75
Q+
Sbjct: 70 LKQV 73
>gi|294659468|ref|XP_461847.2| DEHA2G06886p [Debaryomyces hansenii CBS767]
gi|199433986|emb|CAG90308.2| DEHA2G06886p [Debaryomyces hansenii CBS767]
Length = 99
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTA--GVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
F+GTL+GFD + N+I+++ ER+ P +++ LGL+++RG NI ++ + +
Sbjct: 21 LFEGTLQGFDNSTNVIINNCIERLIYPDEQDDNQEIPLGLYLMRGGNIVCIGEVDDTIEA 80
Query: 69 PV 70
+
Sbjct: 81 DI 82
>gi|403415254|emb|CCM01954.1| predicted protein [Fibroporia radiculosa]
Length = 116
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
QG L+ +DQ N++L+D+ ER++ E V GL +IRG+N+ + ++ VP
Sbjct: 11 LQGVLRSYDQFANLVLEDTVERIFCQDVFAE-VWRGLFLIRGENVVLLGEVDLDQEDDVP 69
Query: 72 DPQLT 76
Q+
Sbjct: 70 LRQVA 74
>gi|310793932|gb|EFQ29393.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 99
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Query: 14 GTLKGFDQTINIILDDSHERV-YSPTAG--VEQVVLGLHIIRGDNI 56
GTL+ DQ+ N++L ++ ERV +P +G QV LGL+++RGDN+
Sbjct: 24 GTLEAADQSTNLVLSNAQERVIQTPESGEPSVQVPLGLYLVRGDNV 69
>gi|302695391|ref|XP_003037374.1| hypothetical protein SCHCODRAFT_64638 [Schizophyllum commune
H4-8]
gi|300111071|gb|EFJ02472.1| hypothetical protein SCHCODRAFT_64638 [Schizophyllum commune
H4-8]
Length = 136
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L+D+ E++Y E+ V GL +IRG+N+ + +I VP
Sbjct: 33 GVLRSYDQFANLVLEDTWEKIYHSNLWAEKHV-GLFLIRGENVVLMGEIDLDREDDVP 89
>gi|328867402|gb|EGG15785.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 84
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKI 62
F G ++ FDQ NIIL D+ ER+Y ++ LG+ IRGDN+ I +I
Sbjct: 26 FIGVMRTFDQFANIILQDTVERIYVGNCYSDK-YLGVFFIRGDNVVILGEI 75
>gi|410078143|ref|XP_003956653.1| hypothetical protein KAFR_0C05270 [Kazachstania africana CBS
2517]
gi|372463237|emb|CCF57518.1| hypothetical protein KAFR_0C05270 [Kazachstania africana CBS
2517]
Length = 94
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQV----VLGLHIIRGDNIKIPTKISS 64
I +G ++GFD+ +NI++DD+ E T G EQV LG +++GDNI + T I
Sbjct: 36 IRIRGKIRGFDEFMNIVIDDAVEIPVDSTTGTEQVDKGIKLGRILLKGDNITLITSIDE 94
>gi|342879398|gb|EGU80649.1| hypothetical protein FOXB_08872 [Fusarium oxysporum Fo5176]
Length = 119
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVE---QVVLGLHIIRGDNI 56
GTL DQT N++L+++ ER+ +E QV LGL+++RGDN+
Sbjct: 44 GTLAACDQTTNLVLNNAVERIIRTPDDLEPSAQVPLGLYLVRGDNV 89
>gi|296424977|ref|XP_002842020.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638277|emb|CAZ86211.1| unnamed protein product [Tuber melanosporum]
Length = 99
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 14 GTLKGFDQTINIILDDSHERVYS---PTAGVEQVVLGLHIIRGDNIKI 58
G L G DQT N+IL + ER+++ +QV GL++IRGDN+ I
Sbjct: 24 GKLMGHDQTTNLILSRTIERIFATPGSEEATQQVEHGLYLIRGDNVAI 71
>gi|212537161|ref|XP_002148736.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
marneffei ATCC 18224]
gi|210068478|gb|EEA22569.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
marneffei ATCC 18224]
Length = 169
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPD 72
G L+ +DQ N++L D+ ER+Y+ E+ V GL+++RG+N+ + +I +P+
Sbjct: 65 GVLRSWDQFANLVLQDTVERIYAGNLYAEEHV-GLYLVRGENVLLLGEIDLDKEDDLPE 122
>gi|440290917|gb|ELP84216.1| lsm1, putative [Entamoeba invadens IP1]
Length = 94
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F GTL G+D NI+L + ERV+S + GV + GL ++RGD I + + S V
Sbjct: 21 IFIGTLIGYDNPSNIVLRECIERVFSKS-GVSVIPCGLLVLRGDEIILIGALDEQKDSSV 79
Query: 71 PDPQLTDN 78
P + N
Sbjct: 80 DWPSVIAN 87
>gi|426257308|ref|XP_004022271.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Ovis aries]
Length = 92
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
I+ +G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 41 IWIEGCIIGFDEYVNLVLDDAEE-IHSKTKSRKQ--LGWIMLKGDNITLLQIVSN 92
>gi|392597347|gb|EIW86669.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 136
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L+D+ ER+Y A E GL +IRG+N+ + ++ VP
Sbjct: 31 LHGVLRSYDQFANLVLEDTVERIYHGNAFAEH-WHGLFLIRGENVVLLGEVDLDQEDDVP 89
>gi|170083973|ref|XP_001873210.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650762|gb|EDR15002.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 136
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L+D+ ER+Y A E GL +IRG+N+ + +I +P
Sbjct: 31 LHGVLRSYDQFANLVLEDTVERIYHGNAFAEN-WHGLFLIRGENVVLLGEIDLDREDDIP 89
Query: 72 DPQLTDNFILLP 83
Q+ D +L P
Sbjct: 90 LTQV-DYHLLEP 100
>gi|380471141|emb|CCF47424.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 99
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Query: 14 GTLKGFDQTINIILDDSHERV-YSPTAG--VEQVVLGLHIIRGDNI 56
GTL+ DQ+ N++L + ERV +P +G QV LGL+++RGDN+
Sbjct: 24 GTLEAADQSTNLVLSAAQERVIQTPESGEPSVQVPLGLYLVRGDNV 69
>gi|67478492|ref|XP_654638.1| small nuclear ribonucleoprotein [Entamoeba histolytica HM-1:IMSS]
gi|56471705|gb|EAL49252.1| small nuclear ribonucleoprotein, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407040392|gb|EKE40106.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449708080|gb|EMD47607.1| small nuclear ribonucleoprotein, putative [Entamoeba histolytica
KU27]
Length = 89
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS 63
+GTL GFDQ IN++L D+ E VY T ++ G +++G+NI + +KI
Sbjct: 40 EGTLSGFDQYINLVLTDTEE-VYLKTNTRRKI--GTILLKGENISVISKIE 87
>gi|307109206|gb|EFN57444.1| hypothetical protein CHLNCDRAFT_21126 [Chlorella variabilis]
Length = 112
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
GTL FDQ N++L + ER+ ++ LGLH++RG+N+ + ++ ++ R P P
Sbjct: 20 GTLCSFDQFANLVLSGAKERIIVGQQ-YSEIPLGLHVVRGENVVLLGQLDAA-REPPPGL 77
Query: 74 QL 75
+L
Sbjct: 78 EL 79
>gi|242810005|ref|XP_002485492.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
stipitatus ATCC 10500]
gi|218716117|gb|EED15539.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
stipitatus ATCC 10500]
Length = 166
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPD 72
G L+ +DQ N++L D+ ER+Y+ E+ V GL+++RG+N+ + +I +P+
Sbjct: 62 GVLRSWDQFANLVLQDTVERIYAGNLYAEEHV-GLYLVRGENVLLLGEIDLDKEDDLPE 119
>gi|167379643|ref|XP_001735222.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165902891|gb|EDR28600.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 84
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS 63
+GTL GFDQ IN++L D+ E VY T ++ G +++G+NI + +KI
Sbjct: 35 EGTLSGFDQYINLVLTDTEE-VYLKTNTRRKI--GTILLKGENISVISKIE 82
>gi|304323323|gb|ADM24798.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323325|gb|ADM24799.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323327|gb|ADM24800.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323329|gb|ADM24801.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323335|gb|ADM24804.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323337|gb|ADM24805.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323341|gb|ADM24807.1| putative small nuclear ribonucleoprotein [Sporidiobolus
johnsonii]
Length = 77
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQV-----VLGLHIIRGDNIKIPTKISSSTR 67
GTLKG+DQ +N+++DD E + P G+ + LGL ++RG ++ + + + S
Sbjct: 18 GTLKGYDQLLNLVMDDLEETLRDPDTGLPSIPPATRSLGLAVLRGTSLVVLSPVDGSAE 76
>gi|339249835|ref|XP_003373905.1| small nuclear ribonucleoprotein-associated protein B [Trichinella
spiralis]
gi|316969881|gb|EFV53916.1| small nuclear ribonucleoprotein-associated protein B [Trichinella
spiralis]
Length = 199
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 14/81 (17%)
Query: 14 GTLKGFDQTINIILDDSHE-RVYSPTAG-----VEQVVLGLHIIRGDNIKIPTKISSSTR 67
G LK FD+ +NI+L + E R Y P AG E+ LG ++RG++I +S S
Sbjct: 39 GYLKAFDKYLNIVLSECEEFRRYRPKAGRTVDREEKRTLGFVLLRGEHI-----VSMSVE 93
Query: 68 SPVPDPQLTDNFILLPQIWGI 88
P P D+ +P+ GI
Sbjct: 94 GP---PLKEDDVPQIPKCGGI 111
>gi|345565028|gb|EGX47984.1| hypothetical protein AOL_s00081g311 [Arthrobotrys oligospora ATCC
24927]
Length = 262
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
GTL+ +DQ N++L D+ ER+YS V G +I+RG+N+ + +I P
Sbjct: 42 GTLRSYDQYANLVLQDTIERLYSQNL-YADVPRGCYIVRGENVLLLGEIDLDKEDDTPLK 100
Query: 74 QLTDNFILLPQIWGIERRTLSFMRFGYRPSVDVLHLSASALKVESMAFIMG 124
Q T + +I+ +R ++ + + LH + E + F G
Sbjct: 101 QAT-----VDEIYDAQRAENAYKKQREKKKAKKLHSLGFEAENERVDFKTG 146
>gi|238882680|gb|EEQ46318.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 146
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
Query: 11 FFQGTLKGFDQTINIILDDSHER-VYSP--TAGVEQVV-LGLHIIRGDNI 56
FF+G L+G+D++ NIIL + ER +YS G Q + LG++I+RG+ I
Sbjct: 65 FFEGILEGYDKSTNIILSNCIERIIYSKDDEEGENQEIPLGVYIMRGNEI 114
>gi|440801773|gb|ELR22778.1| LSM domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 135
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
G L+ FDQ N++L+ + ER+Y E+ LGL ++RGDNI + I S
Sbjct: 41 GVLRSFDQYANLVLEQTIERIYVGEQYAEK-NLGLFLVRGDNIVLLGPIDES 91
>gi|50302335|ref|XP_451102.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640233|emb|CAH02690.1| KLLA0A02299p [Kluyveromyces lactis]
Length = 93
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQ----VVLGLHIIRGDNI 56
+G ++GFD+ +N+++DD+ E P +G E V LG +++GDNI
Sbjct: 40 RGKIRGFDEFMNVVIDDAFEIAVDPKSGKESDDKAVFLGRIMLKGDNI 87
>gi|401413338|ref|XP_003886116.1| putative snRNP protein Lsm5 [Neospora caninum Liverpool]
gi|325120536|emb|CBZ56090.1| putative snRNP protein Lsm5 [Neospora caninum Liverpool]
Length = 118
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
GTL+GFD +N++LDD E ++PT GV++ L ++ G+NI +
Sbjct: 47 LAGTLRGFDDFVNMVLDDVTEYTFTPT-GVKKTKLQSILLNGNNITM 92
>gi|213404126|ref|XP_002172835.1| U6 snRNP-associated protein Lsm7 [Schizosaccharomyces japonicus
yFS275]
gi|212000882|gb|EEB06542.1| U6 snRNP-associated protein Lsm7 [Schizosaccharomyces japonicus
yFS275]
Length = 112
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGV---EQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G LKG+DQ +N++LDD E + P G E LGL ++RG + + + S P
Sbjct: 48 GVLKGYDQLMNLVLDDVEENLRDPEDGRVLDETRKLGLVVVRGTTLVLLAPMDGSEEIPN 107
Query: 71 P 71
P
Sbjct: 108 P 108
>gi|397521006|ref|XP_003830597.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Pan paniscus]
Length = 92
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
++ +G + GFD+ +N++LDD+ E ++S T +Q LG I++GDNI + +S+
Sbjct: 41 MWIEGCIIGFDKYMNLVLDDAEE-IHSKTKSRKQ--LGRIILKGDNIPLLQSVSN 92
>gi|183232189|ref|XP_001913674.1| U6 snRNA-associated Sm-like protein LSm8 [Entamoeba histolytica
HM-1:IMSS]
gi|169802157|gb|EDS89550.1| U6 snRNA-associated Sm-like protein LSm8, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407034977|gb|EKE37474.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449708988|gb|EMD48345.1| U6 snrnaassociated Sm family LSm8 protein [Entamoeba histolytica
KU27]
Length = 94
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
+ G L G+D +NI+L +S ER +S GV + GL I+RGD I +
Sbjct: 22 YIGILTGYDNFMNIVLKNSIERTFSK-EGVSNISCGLLILRGDEIMV 67
>gi|304323319|gb|ADM24796.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323321|gb|ADM24797.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323331|gb|ADM24802.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323333|gb|ADM24803.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323339|gb|ADM24806.1| putative small nuclear ribonucleoprotein [Sporidiobolus
johnsonii]
Length = 77
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQV-----VLGLHIIRGDNIKIPTKISSSTR 67
GTLKG+DQ +N+++DD E + P G+ + LGL ++RG ++ + + + S
Sbjct: 18 GTLKGYDQLLNLVMDDLEETLRDPDTGLPSIPPATRSLGLAVLRGTSLVVLSPLDGSAE 76
>gi|402217673|gb|EJT97752.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 135
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVE--QVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L+DS+ER++ G+E V G+ +IRG+N+ + +I VP
Sbjct: 33 GVLRSYDQFANLVLEDSYERIFH---GLEYADVWKGVFVIRGENVVLLGEIDLDVEDEVP 89
>gi|167392087|ref|XP_001740010.1| lsm1 [Entamoeba dispar SAW760]
gi|165896050|gb|EDR23590.1| lsm1, putative [Entamoeba dispar SAW760]
Length = 94
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
+ G L G+D +NI+L +S ER +S GV + GL I+RGD I +
Sbjct: 22 YIGILTGYDNPMNIVLKNSVERTFSK-EGVSNISCGLLILRGDEIMV 67
>gi|332845410|ref|XP_003315041.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Pan troglodytes]
Length = 92
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
++ +G + GFD+ +N++LDD+ E ++S T +Q LG I++GDNI + +S+
Sbjct: 41 MWIEGCIIGFDKYMNLVLDDAEE-IHSKTKSRKQ--LGRIILKGDNIPLLQSVSN 92
>gi|440889654|gb|ELR44674.1| hypothetical protein M91_20945 [Bos grunniens mutus]
Length = 92
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G++ GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGSIIGFDECMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|367008820|ref|XP_003678911.1| hypothetical protein TDEL_0A03680 [Torulaspora delbrueckii]
gi|359746568|emb|CCE89700.1| hypothetical protein TDEL_0A03680 [Torulaspora delbrueckii]
Length = 93
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQV----VLGLHIIRGDNIKIPTKISS 64
I +G + GFD+ +N+++DD+ E P GVE + LG +++GDNI + T +
Sbjct: 35 IRIRGKISGFDEFMNVVIDDALEIPVDPKTGVEDIEKGRKLGKILLKGDNITLITSVDD 93
>gi|403355067|gb|EJY77101.1| hypothetical protein OXYTRI_01268 [Oxytricha trifallax]
Length = 319
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
F GTL FDQ N+IL ER+Y V+ +G+ IRGDN+ + +I +
Sbjct: 245 FIGTLVSFDQKTNLILSACIERIYIENHDVQAEEMGVFFIRGDNVCLIAEIDEN 298
>gi|296476433|tpg|DAA18548.1| TPA: small nuclear ribonucleoprotein polypeptide E-like [Bos
taurus]
Length = 92
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G++ GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGSIIGFDECMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|164661255|ref|XP_001731750.1| hypothetical protein MGL_1018 [Malassezia globosa CBS 7966]
gi|159105651|gb|EDP44536.1| hypothetical protein MGL_1018 [Malassezia globosa CBS 7966]
Length = 130
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAG---VEQVVLGLHIIRGDNI 56
GTLKG+DQ + +++DD E + P+ G E+ LGL ++RG N+
Sbjct: 65 GTLKGYDQLMTLVMDDVEEIKHDPSNGNTTGERRTLGLAVLRGTNL 110
>gi|46107166|ref|XP_380642.1| hypothetical protein FG00466.1 [Gibberella zeae PH-1]
Length = 132
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVE---QVVLGLHIIRGDNI 56
GT+ DQT N++L+++ ER+ E QV LGL+++RGDN+
Sbjct: 43 GTMAACDQTTNLVLNNAVERIIRTPDDSEPSAQVPLGLYLVRGDNV 88
>gi|392334358|ref|XP_002725436.2| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
gi|392355007|ref|XP_002728648.2| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
Length = 92
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
++ +G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 41 MWIEGCIIGFDEYMNLVLDDTEE-IHSKTKSGKQ--LGQIMLKGDNIALLQSVSN 92
>gi|297480322|ref|XP_002707759.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100296197 [Bos taurus]
gi|296482627|tpg|DAA24742.1| TPA: small nuclear ribonucleoprotein polypeptide E-like [Bos
taurus]
Length = 182
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N+ILDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 133 IEGCIIGFDEYMNLILDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 182
>gi|14192871|gb|AAK55776.1|AC079038_10 Putative small nuclear ribonucleoprotein G [Oryza sativa]
Length = 94
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 10/61 (16%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
GTL+GFDQ +N+++D++ E G E+ +G+ +IRG+++ + PVP P
Sbjct: 44 GTLRGFDQFMNLVVDNTVE-----VNGNEKNDIGMVVIRGNSV-----VMIEALEPVPKP 93
Query: 74 Q 74
Q
Sbjct: 94 Q 94
>gi|354543302|emb|CCE40020.1| hypothetical protein CPAR2_100580 [Candida parapsilosis]
Length = 101
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPT----AGVEQVVLGLHIIRGDNI 56
FF+G L+GFD+ NIIL +S ER+ T E + G++I+RG+ I
Sbjct: 21 FFEGILEGFDKNTNIILSNSIERLIHSTQESDEANEAIPSGVNIMRGNEI 70
>gi|345561980|gb|EGX45052.1| hypothetical protein AOL_s00173g153 [Arthrobotrys oligospora ATCC
24927]
Length = 103
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 12/52 (23%)
Query: 14 GTLKGFDQTINIILDDSHERVY---------SPTAGVEQVVLGLHIIRGDNI 56
GTL G DQT N+IL ++ ER++ +P+ VE GL++IRGDN+
Sbjct: 24 GTLLGHDQTTNLILQNTRERIFQTLDTDVENTPSEIVEH---GLYLIRGDNV 72
>gi|297459953|ref|XP_002700818.1| PREDICTED: uncharacterized protein LOC100296197 [Bos taurus]
Length = 182
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N+ILDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 133 IEGCIIGFDEYMNLILDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 182
>gi|400600902|gb|EJP68570.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 255
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKGFD +N++LDD E V LGL ++RG
Sbjct: 191 GTLKGFDALMNLVLDDVQETVRDEEGNESTRPLGLVVVRG 230
>gi|338259|gb|AAB59365.1| small nuclear ribonucleic protein, partial [Homo sapiens]
Length = 92
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|254571117|ref|XP_002492668.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|238032466|emb|CAY70489.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|328353325|emb|CCA39723.1| Sm-like protein LSm1 [Komagataella pastoris CBS 7435]
Length = 157
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 1 MTTFTILSLIFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPT 60
+ T T+ F G L+ FDQ N++L D+ ER+Y + G+ +IRG+N+ +
Sbjct: 45 IVTVTLREGRVFIGILRTFDQFANLVLQDTVERIYIGDDKYAEAPQGVFLIRGENVSLVG 104
Query: 61 KI-------SSSTRSPVPDPQ---LTDNFILLPQIWGIERRTLSFMRFGYRPS 103
+I RS +P P+ + + Q + R L + G+ P
Sbjct: 105 EIDLDQQDKDLEKRSQIPFPEAQRIRKELVAAKQAKTTKERELMLSK-GFEPQ 156
>gi|338724569|ref|XP_003364968.1| PREDICTED: small nuclear ribonucleoprotein E-like, partial [Equus
caballus]
Length = 71
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 23 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 71
>gi|189203891|ref|XP_001938281.1| hypothetical protein PTRG_07949 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330924593|ref|XP_003300696.1| hypothetical protein PTT_12029 [Pyrenophora teres f. teres 0-1]
gi|187985380|gb|EDU50868.1| hypothetical protein PTRG_07949 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325030|gb|EFQ91212.1| hypothetical protein PTT_12029 [Pyrenophora teres f. teres 0-1]
Length = 84
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LDD+ E V AG E+V +G+ +IRG+ +
Sbjct: 28 GILRGYDVYLNIVLDDALEEV----AGGEKVRIGMVVIRGNAV 66
>gi|408398656|gb|EKJ77785.1| hypothetical protein FPSE_02019 [Fusarium pseudograminearum
CS3096]
Length = 118
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 9/49 (18%)
Query: 14 GTLKGFDQTINIILDDSHERVY------SPTAGVEQVVLGLHIIRGDNI 56
GT+ DQT N++L+++ ER+ P+A QV LGL+++RGDN+
Sbjct: 43 GTMAACDQTTNLVLNNAVERIIRTPDDSEPSA---QVPLGLYLVRGDNV 88
>gi|301783571|ref|XP_002927201.1| PREDICTED: small nuclear ribonucleoprotein E-like [Ailuropoda
melanoleuca]
Length = 98
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + IS+
Sbjct: 49 IEGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSISN 98
>gi|326933691|ref|XP_003212934.1| PREDICTED: small nuclear ribonucleoprotein E-like [Meleagris
gallopavo]
Length = 85
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 37 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 85
>gi|320592629|gb|EFX05059.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 107
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI--PTKISSSTRSP 69
G LKGFD +N++LD++ E++ + + LGL +IRG +I P S S +P
Sbjct: 17 GVLKGFDPLLNMVLDNAQEKMRNADGETKSRSLGLAVIRGTHITTLHPVDGSESISNP 74
>gi|281354337|gb|EFB29921.1| hypothetical protein PANDA_016960 [Ailuropoda melanoleuca]
Length = 92
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + IS+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSISN 92
>gi|156086956|ref|XP_001610885.1| snRNP Sm-like protein [Babesia bovis T2Bo]
gi|154798138|gb|EDO07317.1| snRNP Sm-like protein, putative [Babesia bovis]
Length = 87
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G L+GFD +N++LDD E + PT GVE L ++ G NI +
Sbjct: 36 GVLRGFDDYMNVVLDDVTEYTFKPT-GVETTELKDALVNGTNIAM 79
>gi|255550399|ref|XP_002516250.1| lsm1, putative [Ricinus communis]
gi|223544736|gb|EEF46252.1| lsm1, putative [Ricinus communis]
Length = 128
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI-----------KIPTKI 62
G L+ FDQ N++L+ + ERV + ++LGL++IRG+N+ ++P+ +
Sbjct: 35 GILRSFDQFANVVLEGACERVIVGDLYCD-ILLGLYVIRGENVVLIGELDLEKEELPSHM 93
Query: 63 SSSTRSPVPDPQLTDNFILLPQIWGIERRTLSFMRF 98
+ + + + Q + + G R+ + F+ F
Sbjct: 94 TCVSEAEIKRAQKAEREA--TDLKGSMRKRMEFLDF 127
>gi|302921652|ref|XP_003053324.1| hypothetical protein NECHADRAFT_59475 [Nectria haematococca mpVI
77-13-4]
gi|256734264|gb|EEU47611.1| hypothetical protein NECHADRAFT_59475 [Nectria haematococca mpVI
77-13-4]
Length = 133
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
+GTLKG+D +N++LDD HE V LGL ++RG
Sbjct: 68 KGTLKGYDALMNLVLDDVHEVVRDDEGNESTRSLGLVVVRG 108
>gi|300123521|emb|CBK24793.2| unnamed protein product [Blastocystis hominis]
Length = 108
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDN 55
F G L+G DQ N+IL+D ER++S T + +++ RGD+
Sbjct: 23 FTGMLRGVDQVTNLILEDVEERIFSQTEPMRVEKYDVYLFRGDD 66
>gi|66814660|ref|XP_641509.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74856091|sp|Q54W83.1|LSM1_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm1
gi|60469541|gb|EAL67532.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 129
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS 63
F G ++ FDQ NI+L D+ ER+Y ++ LGL IRGDN+ I +I
Sbjct: 23 FIGIMRTFDQFANIVLQDTIERIYVGDCYSDK-NLGLFFIRGDNVVILGEID 73
>gi|109514130|ref|XP_001065908.1| PREDICTED: small nuclear ribonucleoprotein E [Rattus norvegicus]
Length = 92
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
I +G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 41 IRIKGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|255732651|ref|XP_002551249.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131535|gb|EER31095.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 98
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVY-SPTAGV-----EQVVLGLHIIRGDNIKIPTKISS 64
FF+G L+G+D++ NIIL + ER+ SP +++ LG++I+RG+ + +IS
Sbjct: 15 FFEGILEGYDKSTNIILSNCIERIINSPEDEEEEEDNQEIPLGVYIMRGNEVVCIGEISD 74
Query: 65 S 65
Sbjct: 75 E 75
>gi|348553541|ref|XP_003462585.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cavia
porcellus]
Length = 93
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N+ILDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 45 EGCIIGFDEYMNLILDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 93
>gi|254166962|ref|ZP_04873815.1| hypothetical protein ABOONEI_370 [Aciduliprofundum boonei T469]
gi|289597064|ref|YP_003483760.1| Like-Sm ribonucleoprotein core [Aciduliprofundum boonei T469]
gi|197623818|gb|EDY36380.1| hypothetical protein ABOONEI_370 [Aciduliprofundum boonei T469]
gi|289534851|gb|ADD09198.1| Like-Sm ribonucleoprotein core [Aciduliprofundum boonei T469]
Length = 75
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
++G L G+DQ +N++L + E + + GV VV I+RGDN+
Sbjct: 29 YRGVLDGYDQHLNLVLKNVEEIINGESKGVHNVV----IVRGDNV 69
>gi|397505808|ref|XP_003823438.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Pan paniscus]
Length = 92
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNINLLQSVSN 92
>gi|432329090|ref|YP_007247234.1| small nuclear ribonucleoprotein [Aciduliprofundum sp. MAR08-339]
gi|432135799|gb|AGB05068.1| small nuclear ribonucleoprotein [Aciduliprofundum sp. MAR08-339]
Length = 75
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
++G L G+DQ +N++L + E + + GV VV I+RGDN+
Sbjct: 29 YRGVLDGYDQHLNLVLKNVEEIINGESKGVHNVV----IVRGDNV 69
>gi|209882013|ref|XP_002142444.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209558050|gb|EEA08095.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 91
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
+G ++GFD+ +NI+LDD E VY+ V + +G ++RG+NI +
Sbjct: 40 LEGKIQGFDEYMNIVLDDVTE-VYTKKDEVSRRDIGRLMLRGENISL 85
>gi|389738918|gb|EIM80113.1| U6 snRNA-associated Sm-like protein LSm7, partial [Stereum
hirsutum FP-91666 SS1]
Length = 99
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G LKG+DQ +N++LD+ E V PT LGL ++RG I +
Sbjct: 39 GVLKGYDQLLNLVLDEVQEEVQEPTPHTRS--LGLTVLRGPTITL 81
>gi|312005|emb|CAA46626.1| small nuclear ribonucleoprotein E [Mus musculus]
gi|338269|gb|AAA36621.1| small nuclear ribonucleoprotein E, partial [Homo sapiens]
Length = 81
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 33 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 81
>gi|348569444|ref|XP_003470508.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cavia
porcellus]
Length = 92
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+ +G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 41 MHIEGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGWIMLKGDNITLLQSVSN 92
>gi|147903209|ref|NP_001090934.1| small nuclear ribonucleoprotein E [Sus scrofa]
gi|166233313|sp|A1XQR9.1|RUXE_PIG RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|117660533|gb|ABK55625.1| SNRPE [Sus scrofa]
gi|117660560|gb|ABK55626.1| NDUFB2 [Sus scrofa]
Length = 92
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|119611901|gb|EAW91495.1| small nuclear ribonucleoprotein polypeptide E, isoform CRA_b
[Homo sapiens]
Length = 84
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 36 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 84
>gi|354459631|pdb|3SWN|C Chain C, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459634|pdb|3SWN|F Chain F, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459637|pdb|3SWN|O Chain O, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459640|pdb|3SWN|R Chain R, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
Length = 117
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVV---LGLHIIRGDNIKIPTKISSSTRSPV 70
G LKGFDQ +N++LDD E++ +P G LGL ++RG + + + S P
Sbjct: 52 GILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIPN 111
Query: 71 P 71
P
Sbjct: 112 P 112
>gi|339522121|gb|AEJ84225.1| small nuclear ribonucleoprotein E [Capra hircus]
Length = 79
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 31 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 79
>gi|19075840|ref|NP_588340.1| U6 snRNP-associated protein Lsm7 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74626865|sp|O74499.1|LSM7_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|3581912|emb|CAA20851.1| U6 snRNP-associated protein Lsm7 (predicted) [Schizosaccharomyces
pombe]
Length = 113
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVV---LGLHIIRGDNIKIPTKISSSTRSPV 70
G LKGFDQ +N++LDD E++ +P G LGL ++RG + + + S P
Sbjct: 48 GILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMDGSEEIPN 107
Query: 71 P 71
P
Sbjct: 108 P 108
>gi|398397857|ref|XP_003852386.1| hypothetical protein MYCGRDRAFT_104681 [Zymoseptoria tritici
IPO323]
gi|339472267|gb|EGP87362.1| hypothetical protein MYCGRDRAFT_104681 [Zymoseptoria tritici
IPO323]
Length = 93
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
GTL+G+D +NI+LD++ E P A E+V LG+ +IRG+++
Sbjct: 28 GTLRGYDVFLNIVLDEATE--SKPNA--EKVRLGMCVIRGNSV 66
>gi|171687845|ref|XP_001908863.1| hypothetical protein [Podospora anserina S mat+]
gi|170943884|emb|CAP69536.1| unnamed protein product [Podospora anserina S mat+]
Length = 144
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVE---QVVLGLHIIRGDNI 56
GTL +D T N++L ++ ER+ E QV LGL++IRG+N+
Sbjct: 70 GTLAAYDNTTNLVLQNTIERIIRTPDDAEPSAQVPLGLYLIRGENV 115
>gi|46130650|ref|XP_389105.1| hypothetical protein FG08929.1 [Gibberella zeae PH-1]
gi|408391559|gb|EKJ70933.1| hypothetical protein FPSE_08901 [Fusarium pseudograminearum CS3096]
Length = 131
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
+GTLKG+D +N++LDD HE V LGL ++RG
Sbjct: 66 KGTLKGYDALMNLVLDDVHEVVRDDEGNESTRSLGLVVVRG 106
>gi|149408455|ref|XP_001513314.1| PREDICTED: small nuclear ribonucleoprotein E-like
[Ornithorhynchus anatinus]
Length = 92
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRVMLKGDNITLLQSVSN 92
>gi|50545209|ref|XP_500142.1| YALI0A16775p [Yarrowia lipolytica]
gi|49646007|emb|CAG84074.1| YALI0A16775p [Yarrowia lipolytica CLIB122]
Length = 144
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYS-PTAGVEQVVLGLHIIRGDNIKIPTKIS 63
F G L+ FDQ N++L D++E+ ++ P + G +IIRG+N+++ +++
Sbjct: 38 FFGILRSFDQFANLVLQDTYEKYFAVPEKVYGEEYRGTYIIRGENVELMGEVN 90
>gi|323507716|emb|CBQ67587.1| probable U6 snRNA-associated Sm-like protein LSm5 [Sporisorium
reilianum SRZ2]
Length = 103
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
F GTL GFD +N++L+D E +P ++ LG ++ G+NI
Sbjct: 46 FSGTLLGFDDYVNMVLEDVTEYETTPDGKKKKTKLGQTLLNGNNI 90
>gi|296230202|ref|XP_002760604.1| PREDICTED: small nuclear ribonucleoprotein E-like [Callithrix
jacchus]
Length = 92
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|48477793|ref|YP_023499.1| snRNP Sm-like protein [Picrophilus torridus DSM 9790]
gi|48430441|gb|AAT43306.1| snRNP Sm-like protein [Picrophilus torridus DSM 9790]
Length = 71
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+GTL G+D+ +N+ LDD+ E +G Q LG +IRG N+
Sbjct: 27 LEGTLAGYDEYMNMTLDDAEE------SGETQRKLGTVVIRGSNV 65
>gi|109484106|ref|XP_001064438.1| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
gi|293349553|ref|XP_002727191.1| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
Length = 92
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|298714462|emb|CBJ27484.1| Small nuclear ribonucleoprotein-associated protein B [Ectocarpus
siliculosus]
Length = 217
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 4 FTILSLIFFQGTLKGFDQTINIILDDSHE-RVYSPTAGVEQV-----------VLGLHII 51
TIL GTL FD+ +N++L D E R + P G E VLGL ++
Sbjct: 19 ITILDGRVLVGTLMAFDRHLNLVLGDCEEYRRFKPKKGSEAAAGIHEEREEKRVLGLVLL 78
Query: 52 RGDNIK 57
RG+N++
Sbjct: 79 RGENVQ 84
>gi|4507129|ref|NP_003085.1| small nuclear ribonucleoprotein E [Homo sapiens]
gi|27883844|ref|NP_033253.1| small nuclear ribonucleoprotein E [Mus musculus]
gi|45382605|ref|NP_990581.1| small nuclear ribonucleoprotein E [Gallus gallus]
gi|134085710|ref|NP_001076928.1| small nuclear ribonucleoprotein E [Bos taurus]
gi|388490108|ref|NP_001253704.1| small nuclear ribonucleoprotein E [Macaca mulatta]
gi|403420626|ref|NP_001258166.1| small nuclear ribonucleoprotein polypeptide E [Rattus norvegicus]
gi|114572016|ref|XP_001158544.1| PREDICTED: small nuclear ribonucleoprotein E isoform 3 [Pan
troglodytes]
gi|126306697|ref|XP_001364976.1| PREDICTED: small nuclear ribonucleoprotein E-like [Monodelphis
domestica]
gi|291402573|ref|XP_002717622.1| PREDICTED: small nuclear ribonucleoprotein polypeptide E
[Oryctolagus cuniculus]
gi|297662243|ref|XP_002809621.1| PREDICTED: small nuclear ribonucleoprotein E [Pongo abelii]
gi|327271183|ref|XP_003220367.1| PREDICTED: small nuclear ribonucleoprotein E-like [Anolis
carolinensis]
gi|344277002|ref|XP_003410294.1| PREDICTED: small nuclear ribonucleoprotein E-like [Loxodonta
africana]
gi|348578175|ref|XP_003474859.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cavia
porcellus]
gi|354487267|ref|XP_003505795.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cricetulus
griseus]
gi|359324001|ref|XP_003640259.1| PREDICTED: small nuclear ribonucleoprotein E-like [Canis lupus
familiaris]
gi|397479845|ref|XP_003811214.1| PREDICTED: small nuclear ribonucleoprotein E-like [Pan paniscus]
gi|397504925|ref|XP_003823029.1| PREDICTED: small nuclear ribonucleoprotein E [Pan paniscus]
gi|402857535|ref|XP_003893308.1| PREDICTED: small nuclear ribonucleoprotein E [Papio anubis]
gi|402858753|ref|XP_003893852.1| PREDICTED: small nuclear ribonucleoprotein E-like [Papio anubis]
gi|403261763|ref|XP_003923280.1| PREDICTED: small nuclear ribonucleoprotein E-like [Saimiri
boliviensis boliviensis]
gi|403294819|ref|XP_003938362.1| PREDICTED: small nuclear ribonucleoprotein E [Saimiri boliviensis
boliviensis]
gi|410986283|ref|XP_003999440.1| PREDICTED: small nuclear ribonucleoprotein E [Felis catus]
gi|426239377|ref|XP_004013598.1| PREDICTED: small nuclear ribonucleoprotein E [Ovis aries]
gi|426333365|ref|XP_004028248.1| PREDICTED: small nuclear ribonucleoprotein E-like [Gorilla
gorilla gorilla]
gi|55977309|sp|P62305.1|RUXE_MOUSE RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|61237380|sp|P62304.1|RUXE_HUMAN RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|78102504|sp|P62303.1|RUXE_CHICK RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|190360254|sp|A4FUI2.1|RUXE_BOVIN RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|225734045|pdb|3CW1|E Chain E, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734054|pdb|3CW1|W Chain W, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734063|pdb|3CW1|X Chain X, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734072|pdb|3CW1|Y Chain Y, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|315583605|pdb|3PGW|E Chain E, Crystal Structure Of Human U1 Snrnp
gi|315583614|pdb|3PGW|H Chain H, Crystal Structure Of Human U1 Snrnp
gi|332639437|pdb|2Y9A|E Chain E, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639444|pdb|2Y9A|L Chain L, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639451|pdb|2Y9A|S Chain S, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639461|pdb|2Y9B|E Chain E, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639468|pdb|2Y9B|L Chain L, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639475|pdb|2Y9B|S Chain S, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639485|pdb|2Y9C|E Chain E, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639492|pdb|2Y9C|L Chain L, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639499|pdb|2Y9C|S Chain S, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639509|pdb|2Y9D|E Chain E, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639516|pdb|2Y9D|L Chain L, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639523|pdb|2Y9D|S Chain S, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|343781212|pdb|3S6N|E Chain E, Crystal Structure Of The Gemin2-Binding Domain Of Smn,
Gemin2 In Complex With Smd1D2FEG FROM HUMAN
gi|444302200|pdb|4F7U|E Chain E, Macromolecular Machine 6
gi|444302201|pdb|4F7U|H Chain H, Macromolecular Machine 6
gi|453055424|pdb|1VU2|C Chain C, The 8s Snrnp Assembly Intermediate
gi|453055432|pdb|1VU2|K Chain K, The 8s Snrnp Assembly Intermediate
gi|453055440|pdb|1VU2|S Chain S, The 8s Snrnp Assembly Intermediate
gi|453055448|pdb|1VU2|AA Chain a, The 8s Snrnp Assembly Intermediate
gi|453055456|pdb|1VU2|II Chain i, The 8s Snrnp Assembly Intermediate
gi|453055464|pdb|1VU2|QQ Chain q, The 8s Snrnp Assembly Intermediate
gi|453055476|pdb|1VU2|YY Chain y, The 8s Snrnp Assembly Intermediate
gi|453055480|pdb|1VU3|C Chain C, The 8s Snrnp Assembly Intermediate
gi|453055488|pdb|1VU3|K Chain K, The 8s Snrnp Assembly Intermediate
gi|453055496|pdb|1VU3|S Chain S, The 8s Snrnp Assembly Intermediate
gi|453055504|pdb|1VU3|AA Chain a, The 8s Snrnp Assembly Intermediate
gi|453055512|pdb|1VU3|II Chain i, The 8s Snrnp Assembly Intermediate
gi|453055520|pdb|1VU3|QQ Chain q, The 8s Snrnp Assembly Intermediate
gi|453056012|pdb|4F77|K Chain K, The 8s Snrnp Assembly Intermediate
gi|453056020|pdb|4F77|C Chain C, The 8s Snrnp Assembly Intermediate
gi|453056028|pdb|4F77|S Chain S, The 8s Snrnp Assembly Intermediate
gi|453056036|pdb|4F77|AA Chain a, The 8s Snrnp Assembly Intermediate
gi|453056044|pdb|4F77|II Chain i, The 8s Snrnp Assembly Intermediate
gi|453056052|pdb|4F77|QQ Chain q, The 8s Snrnp Assembly Intermediate
gi|453056064|pdb|4F77|YY Chain y, The 8s Snrnp Assembly Intermediate
gi|35105|emb|CAA31007.1| unnamed protein product [Homo sapiens]
gi|304425|gb|AAA49073.1| small nuclear ribonucleoprotein E [Gallus gallus]
gi|312002|emb|CAA46624.1| SmE protein [Gallus gallus]
gi|338267|gb|AAA90926.1| small nuclear RNA protein (snRNP E) [Homo sapiens]
gi|12803609|gb|AAH02639.1| Small nuclear ribonucleoprotein polypeptide E [Homo sapiens]
gi|12859681|dbj|BAB31734.1| unnamed protein product [Mus musculus]
gi|14198403|gb|AAH08262.1| Small nuclear ribonucleoprotein E [Mus musculus]
gi|33585911|gb|AAH55765.1| Small nuclear ribonucleoprotein E [Mus musculus]
gi|56078667|gb|AAH51207.1| Small nuclear ribonucleoprotein E [Mus musculus]
gi|60688403|gb|AAH90951.1| Small nuclear ribonucleoprotein polypeptide E [Homo sapiens]
gi|119611900|gb|EAW91494.1| small nuclear ribonucleoprotein polypeptide E, isoform CRA_a
[Homo sapiens]
gi|133777545|gb|AAI14916.1| SNRPE protein [Bos taurus]
gi|149058608|gb|EDM09765.1| rCG46024, isoform CRA_a [Rattus norvegicus]
gi|189053260|dbj|BAG35066.1| unnamed protein product [Homo sapiens]
gi|208967438|dbj|BAG73733.1| small nuclear ribonucleoprotein polypeptide E [synthetic
construct]
gi|296479386|tpg|DAA21501.1| TPA: small nuclear ribonucleoprotein E [Bos taurus]
gi|344246138|gb|EGW02242.1| Small nuclear ribonucleoprotein E [Cricetulus griseus]
gi|355558873|gb|EHH15653.1| hypothetical protein EGK_01772 [Macaca mulatta]
gi|355746009|gb|EHH50634.1| hypothetical protein EGM_01497 [Macaca fascicularis]
gi|387542988|gb|AFJ72121.1| small nuclear ribonucleoprotein E [Macaca mulatta]
gi|410355685|gb|JAA44446.1| small nuclear ribonucleoprotein polypeptide E [Pan troglodytes]
gi|417395589|gb|JAA44847.1| Putative small nuclear ribonucleoprotein e [Desmodus rotundus]
Length = 92
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|440911215|gb|ELR60916.1| Small nuclear ribonucleoprotein E, partial [Bos grunniens mutus]
Length = 91
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N+ILDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 42 IEGCIIGFDEYMNLILDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 91
>gi|301765636|ref|XP_002918237.1| PREDICTED: small nuclear ribonucleoprotein E-like [Ailuropoda
melanoleuca]
Length = 92
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|34394185|dbj|BAC84637.1| putative small nuclear ribonucleoprotein E [Oryza sativa Japonica
Group]
gi|215769180|dbj|BAH01409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199999|gb|EEC82426.1| hypothetical protein OsI_26821 [Oryza sativa Indica Group]
gi|222637431|gb|EEE67563.1| hypothetical protein OsJ_25073 [Oryza sativa Japonica Group]
Length = 80
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 10/61 (16%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
GTL+GFDQ +N+++D++ E G E+ +G+ +IRG+++ + PVP P
Sbjct: 30 GTLRGFDQFMNLVVDNTVE-----VNGNEKNDIGMVVIRGNSV-----VMIEALEPVPKP 79
Query: 74 Q 74
Q
Sbjct: 80 Q 80
>gi|417395580|gb|JAA44844.1| Putative small nuclear ribonucleoprotein e [Desmodus rotundus]
Length = 92
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
++ +G + GFD+ +N++LDD+ E ++S T +Q LG +++G+NI + +S+
Sbjct: 41 VWIEGYVVGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRSMLKGNNIILLQNVSN 92
>gi|148707697|gb|EDL39644.1| small nuclear ribonucleoprotein E, isoform CRA_b [Mus musculus]
Length = 86
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 38 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 86
>gi|351707608|gb|EHB10527.1| Small nuclear ribonucleoprotein E [Heterocephalus glaber]
Length = 92
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|297844878|ref|XP_002890320.1| hypothetical protein ARALYDRAFT_472135 [Arabidopsis lyrata subsp.
lyrata]
gi|297336162|gb|EFH66579.1| hypothetical protein ARALYDRAFT_472135 [Arabidopsis lyrata subsp.
lyrata]
Length = 128
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI-----------KIPTKI 62
G L+ FDQ N ++++++ERV + + LGL+IIRG+N+ ++P ++
Sbjct: 35 GLLRSFDQFANAVIEEAYERVIVGDLYCD-IPLGLYIIRGENVVLIGELDVEKEELPAQM 93
Query: 63 SSSTRSPVPDPQLTDNFILLPQIWGIERRTLSFM 96
+ + + Q + +L + G R+ + F+
Sbjct: 94 VQVSEAEIKRAQKAEKEEML--LKGTMRKRMEFL 125
>gi|390477421|ref|XP_002760651.2| PREDICTED: small nuclear ribonucleoprotein E-like [Callithrix
jacchus]
Length = 79
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 31 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 79
>gi|380800507|gb|AFE72129.1| small nuclear ribonucleoprotein E, partial [Macaca mulatta]
Length = 59
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 10 IEGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 59
>gi|303315247|ref|XP_003067631.1| U6 snRNA-associated Sm-like protein LSm1, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240107301|gb|EER25486.1| U6 snRNA-associated Sm-like protein LSm1, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320035563|gb|EFW17504.1| small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
Length = 209
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
G L+ +DQ N++L D+ ERVYS E+ G++++RG+N+ + +I +P+P
Sbjct: 105 GVLRSWDQFANLVLQDTVERVYSGNLYGEE-PRGVYLVRGENVLLLGEIDLDKEDDIPEP 163
>gi|55632867|ref|XP_520443.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Pan troglodytes]
Length = 92
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|407918877|gb|EKG12139.1| hypothetical protein MPH_10770 [Macrophomina phaseolina MS6]
Length = 98
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVE---QVVLGLHIIRGDNIKI 58
GTL DQ N++L D+ ER+ P E +V GL++IRGDN+ +
Sbjct: 23 GTLLSCDQMTNLVLSDTWERIIRPADDPEPSSEVQHGLYLIRGDNVAL 70
>gi|342886030|gb|EGU85973.1| hypothetical protein FOXB_03482 [Fusarium oxysporum Fo5176]
Length = 133
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
+GTLKG+D +N++LDD HE V LGL ++RG
Sbjct: 68 KGTLKGYDALMNLVLDDVHEVVRDDEGNDSTRSLGLVVVRG 108
>gi|424513743|emb|CCO66365.1| U6 snRNA-associated Sm-like protein LSm1 [Bathycoccus prasinos]
Length = 124
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
GTL+ FDQ NI+L+++ ER+ T V LGL+I+RG+N+ + + +
Sbjct: 33 GTLRSFDQFANIVLENAVERMIVGTH-YSDVPLGLYIVRGENVVLMGDVDEA 83
>gi|148707696|gb|EDL39643.1| small nuclear ribonucleoprotein E, isoform CRA_a [Mus musculus]
Length = 105
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 57 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 105
>gi|390458031|ref|XP_003732042.1| PREDICTED: small nuclear ribonucleoprotein E-like [Callithrix
jacchus]
Length = 89
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 40 IEGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 89
>gi|145484906|ref|XP_001428462.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395548|emb|CAK61064.1| unnamed protein product [Paramecium tetraurelia]
Length = 66
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 23 INIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS 63
+N +L +S ERVYS GV+ + GL +IRGD + + +++
Sbjct: 1 MNCVLQNSEERVYSLETGVQFLNAGLQVIRGDTVAVLGEVN 41
>gi|385302463|gb|EIF46594.1| small nuclear ribonucleoprotein e [Dekkera bruxellensis AWRI1499]
Length = 79
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G LKGFD+ +N++LDD+ E S +Q LG +++GDNI
Sbjct: 32 GVLKGFDEFMNVVLDDAVE--ISQGXSAKQRKLGTVLLKGDNI 72
>gi|348563323|ref|XP_003467457.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cavia
porcellus]
Length = 92
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIVGFDEYMNLVLDDEEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|293356012|ref|XP_002728814.1| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
gi|392337758|ref|XP_003753347.1| PREDICTED: small nuclear ribonucleoprotein E-like [Rattus
norvegicus]
Length = 92
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|392868828|gb|EAS34628.2| small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 209
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
G L+ +DQ N++L D+ ERVYS E+ G++++RG+N+ + +I +P+P
Sbjct: 105 GVLRSWDQFANLVLQDTVERVYSGNLYGEE-PRGVYLVRGENVLLLGEIDLDKEDDIPEP 163
>gi|332248094|ref|XP_003273196.1| PREDICTED: small nuclear ribonucleoprotein E [Nomascus
leucogenys]
Length = 52
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 3 IEGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 52
>gi|395734016|ref|XP_003776336.1| PREDICTED: small nuclear ribonucleoprotein E-like [Pongo abelii]
Length = 92
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E V+S T +Q LG +++GDNI + S+
Sbjct: 44 EGCIVGFDEYMNLVLDDAEE-VHSKTKSRKQ--LGRIMLKGDNITLLRSFSN 92
>gi|74747670|sp|Q5VYJ4.1|RUEL1_HUMAN RecName: Full=Putative small nuclear ribonucleoprotein
polypeptide E-like protein 1
Length = 92
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|299472050|emb|CBN80133.1| Sm-like protein LSm1 [Ectocarpus siliculosus]
Length = 138
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G ++ +DQ NI+L+D+HER + + LGL+++RGD + + ++ TR P
Sbjct: 48 GVMRSYDQFSNIVLEDTHERHFVRDI-FGDISLGLYLVRGDALVLMGEL-DETREETP 103
>gi|344303572|gb|EGW33821.1| hypothetical protein SPAPADRAFT_54105 [Spathaspora passalidarum
NRRL Y-27907]
Length = 166
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+ FDQ N++L D++ER+Y E V G+ ++RG+N+
Sbjct: 62 GILRTFDQFANLVLQDTYERIYLDDKFAE-VYRGVFMVRGENV 103
>gi|159042090|ref|YP_001541342.1| like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
gi|157920925|gb|ABW02352.1| Like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
Length = 79
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+GTLK +DQ +N++LDD+ E + P +++ G+ +IRGD +
Sbjct: 31 IRGTLKNYDQHMNLLLDDTEE-IIDPKTSIKR---GMVVIRGDTV 71
>gi|237835661|ref|XP_002367128.1| snRNP protein Lsm5, putative [Toxoplasma gondii ME49]
gi|211964792|gb|EEA99987.1| snRNP protein Lsm5, putative [Toxoplasma gondii ME49]
gi|221485337|gb|EEE23618.1| snRNP protein Lsm5, putative [Toxoplasma gondii GT1]
gi|221506198|gb|EEE31833.1| snRNP protein Lsm5, putative [Toxoplasma gondii VEG]
Length = 119
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
GTL+GFD +N++LDD E ++PT GV++ L ++ G++I +
Sbjct: 48 LAGTLRGFDDFVNMVLDDVTEYTFTPT-GVKKTKLQSILLNGNSITM 93
>gi|443895126|dbj|GAC72472.1| hypothetical protein PANT_7d00115 [Pseudozyma antarctica T-34]
Length = 117
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 14 GTLKGFDQTINIILDDSHE--RVYSPTAGVEQVVLGLHIIRG 53
G LKGFDQ +N+++DD HE R G + LGL ++RG
Sbjct: 53 GVLKGFDQLMNLVMDDVHEALRDADGNVGEKTRNLGLVVLRG 94
>gi|383413025|gb|AFH29726.1| small nuclear ribonucleoprotein E [Macaca mulatta]
Length = 92
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|387018116|gb|AFJ51176.1| Small nuclear ribonucleoprotein E [Crotalus adamanteus]
Length = 92
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS 63
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVS 91
>gi|196009502|ref|XP_002114616.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190582678|gb|EDV22750.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 76
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
GTL+GFD +NI+LDD+ E+V S E LG+ +IRG+++
Sbjct: 29 GTLRGFDPFMNIVLDDTVEQVSSK----ENNHLGMVVIRGNSV 67
>gi|449304976|gb|EMD00983.1| hypothetical protein BAUCODRAFT_118700 [Baudoinia compniacensis
UAMH 10762]
Length = 98
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVL---GLHIIRGDNIKI 58
GTL DQ N++L D+ ER+ PT E + GL+++RGDN+ I
Sbjct: 21 LTGTLVSCDQVTNVVLKDTIERIIRPTDDEEPSIEQPHGLYLVRGDNVVI 70
>gi|303283710|ref|XP_003061146.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457497|gb|EEH54796.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 103
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSP 69
GTL+ FDQ NI+L+ + ER+ + + LGL+I+RG+N+ + + S +
Sbjct: 14 GTLRSFDQFANIVLEGAVERIIVNKS-YSDIPLGLYIVRGENVVLMGGVDESKETE 68
>gi|429848447|gb|ELA23927.1| small nuclear ribonucleoprotein lsm8 [Colletotrichum
gloeosporioides Nara gc5]
Length = 99
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 14 GTLKGFDQTINIILDDSHERV-YSPTAGVE--QVVLGLHIIRGDNI 56
G L+ DQ N++L ++ ERV +P +G +V LGL+++RGDN+
Sbjct: 24 GNLEAADQNTNLVLSNAQERVIQTPESGEPSVEVPLGLYLVRGDNV 69
>gi|189208804|ref|XP_001940735.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976828|gb|EDU43454.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 131
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKG+DQ +N++LD+ E + + LGL + RG + + + + S P P
Sbjct: 68 GTLKGYDQLMNLVLDEVKEALTDDEGNIRYRKLGLIVARGTLLVVISPVDGSEEIPNP 125
>gi|254167717|ref|ZP_04874567.1| hypothetical protein ABOONEI_1009 [Aciduliprofundum boonei T469]
gi|197623245|gb|EDY35810.1| hypothetical protein ABOONEI_1009 [Aciduliprofundum boonei T469]
Length = 53
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
++G L G+DQ +N++L + E + + GV VV I+RGDN+
Sbjct: 7 YRGVLDGYDQHLNLVLKNVEEIINGESKGVHNVV----IVRGDNV 47
>gi|58258057|ref|XP_566441.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57222578|gb|AAW40622.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 216
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTA-GVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F GTL GFD +N++L D E Y TA G+ + LG ++ G+NI + + ++T P
Sbjct: 29 FTGTLMGFDDYVNMVLKDVKE--YEVTASGITETDLGDTLLNGNNIAM---VRTTTHLPS 83
Query: 71 P 71
P
Sbjct: 84 P 84
>gi|330917406|ref|XP_003297804.1| hypothetical protein PTT_08326 [Pyrenophora teres f. teres 0-1]
gi|311329333|gb|EFQ94110.1| hypothetical protein PTT_08326 [Pyrenophora teres f. teres 0-1]
Length = 131
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKG+DQ +N++LD+ E + + LGL + RG + + + + S P P
Sbjct: 68 GTLKGYDQLMNLVLDEVKEALTDDQGNIRYRKLGLIVARGTLLVVISPVDGSEEIPNP 125
>gi|255079102|ref|XP_002503131.1| like-sm protein [Micromonas sp. RCC299]
gi|226518397|gb|ACO64389.1| like-sm protein [Micromonas sp. RCC299]
Length = 127
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSP 69
G L+ FDQ NI+L+++ ER+ T+ + LGL+I+RG+N+ + I + +
Sbjct: 37 GFLRSFDQFANIVLENACERIIVGTS-FSDIPLGLYIVRGENVVLMGDIDETIETE 91
>gi|134105981|ref|XP_778001.1| hypothetical protein CNBA0080 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260704|gb|EAL23354.1| hypothetical protein CNBA0080 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 216
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTA-GVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
F GTL GFD +N++L D E Y TA G+ + LG ++ G+NI + + ++T P
Sbjct: 29 FTGTLMGFDDYVNMVLKDVKE--YEVTASGITETDLGDTLLNGNNIAM---VRTTTHLPS 83
Query: 71 P 71
P
Sbjct: 84 P 84
>gi|289742143|gb|ADD19819.1| small ribonucleoprotein particle protein B [Glossina morsitans
morsitans]
Length = 200
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 12 FQGTLKGFDQTINIILDDSHE--RVYSPTAGV----EQVVLGLHIIRGDNI 56
F GT K FD+ +N+IL D E ++ S A V E+ VLG ++RG+NI
Sbjct: 27 FIGTFKAFDKHMNLILGDCEEFRKIRSKNAKVPEREEKRVLGFVLLRGENI 77
>gi|281338088|gb|EFB13672.1| hypothetical protein PANDA_003444 [Ailuropoda melanoleuca]
Length = 83
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+G + GFD+++N+ILDD+ E + S T +Q LG +++GDNI
Sbjct: 40 EGCIIGFDESMNLILDDAEE-ILSKTKSRKQ--LGRIMLKGDNI 80
>gi|392580035|gb|EIW73162.1| hypothetical protein TREMEDRAFT_24108, partial [Tremella
mesenterica DSM 1558]
Length = 79
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
GTLKGFDQ +N+++DD E + G+ LGL ++RG NI
Sbjct: 31 GTLKGFDQLMNLVMDDVVEEFEN---GMPSRSLGLVVLRGPNI 70
>gi|281210655|gb|EFA84821.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 132
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 18/125 (14%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
F G ++ FDQ NIIL D+ ER+Y ++ LG+ IRGD + I +I P
Sbjct: 26 FIGVMRTFDQFANIILQDTIERIYVGDKYSDK-HLGVFFIRGDTVVILGEID-------P 77
Query: 72 DPQLTDNFILLPQIWGIERRTLSFMRFGYRPSVDVLHLSASALKVESMAFIMGLTLPCVL 131
D ++ + ++ + ++ + R + + + + ES GLT+ +L
Sbjct: 78 DKEVKE-----KKLTKVSWEEINLAQQAEREKLQQMEQTKRRIMTES-----GLTIDSIL 127
Query: 132 SHDLF 136
+ D F
Sbjct: 128 NLDDF 132
>gi|441598236|ref|XP_004087442.1| PREDICTED: putative small nuclear ribonucleoprotein polypeptide
E-like protein 1-like [Nomascus leucogenys]
Length = 92
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDKYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNIPLLQSVSN 92
>gi|429966424|gb|ELA48421.1| hypothetical protein VCUG_00030 [Vavraia culicis 'floridensis']
Length = 89
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 11 FFQGTLKGFDQTINIILDDSHE-RVYSPTAGVEQVVLGLHIIRGDNI 56
FF G L D+ +NI+L+D+ E R Y G E LGL + RG +
Sbjct: 22 FFIGNLLAIDEFLNIVLNDTEEHRKYKNKKGYETRNLGLCVFRGSKV 68
>gi|315425372|dbj|BAJ47038.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|315426552|dbj|BAJ48182.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|315426610|dbj|BAJ48238.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|343485302|dbj|BAJ50956.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
Length = 74
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+G LKG+DQ +NI+L+D+ E + T Q LG ++RGD+I
Sbjct: 27 VLRGLLKGYDQHMNIVLEDTDELIDENT----QNKLGTIVVRGDSI 68
>gi|21537395|gb|AAM61736.1| unknown [Arabidopsis thaliana]
Length = 128
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+ FDQ N +L++++ERV + + LGL+IIRG+N+
Sbjct: 35 GLLRSFDQFANAVLEEAYERVIVGDLYCD-IPLGLYIIRGENV 76
>gi|452003159|gb|EMD95616.1| hypothetical protein COCHEDRAFT_1209910 [Cochliobolus
heterostrophus C5]
Length = 98
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAG---VEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G L D ++N++L ++ ER+ P E+V LGL+IIRGD++ + ++ S +
Sbjct: 23 GLLHSCDGSMNLVLQEATERIIRPVEEEIPSEEVPLGLYIIRGDSVAVVGRVDEEIDSKI 82
>gi|330842218|ref|XP_003293079.1| hypothetical protein DICPUDRAFT_157882 [Dictyostelium purpureum]
gi|325076610|gb|EGC30382.1| hypothetical protein DICPUDRAFT_157882 [Dictyostelium purpureum]
Length = 131
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS 63
F G ++ FDQ NI+L D+ ER+Y ++ LG+ IRGDN+ I +I
Sbjct: 25 FIGMMRTFDQFANIVLQDTIERIYVGDCYSDK-NLGVFFIRGDNVVILGEID 75
>gi|393219456|gb|EJD04943.1| U6 snRNA-associated Sm-like protein LSm7 [Fomitiporia mediterranea
MF3/22]
Length = 134
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G LKG+DQ +N++LDD E+++ P + LGL ++RG I
Sbjct: 73 GILKGYDQLLNLVLDDVEEQLHEPEP--RKRSLGLVVLRGPTI 113
>gi|336376345|gb|EGO04680.1| hypothetical protein SERLA73DRAFT_173904 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389388|gb|EGO30531.1| hypothetical protein SERLADRAFT_454838 [Serpula lacrymans var.
lacrymans S7.9]
Length = 136
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L+D+ ER+Y E G+ +IRG+N+ + +I +P
Sbjct: 31 LHGVLRSYDQFANLVLEDTVERLYHENTFAEN-WHGIFVIRGENVVLLGEIDLDKEDDIP 89
Query: 72 DPQL 75
Q+
Sbjct: 90 LNQV 93
>gi|238492871|ref|XP_002377672.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
flavus NRRL3357]
gi|317156803|ref|XP_003190769.1| U6 snRNA-associated Sm-like protein LSm7 [Aspergillus oryzae RIB40]
gi|220696166|gb|EED52508.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
flavus NRRL3357]
Length = 133
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKGFDQ +N++LDD E + LGL + RG
Sbjct: 70 GTLKGFDQLMNLVLDDVKESMRDDEGNENTRSLGLIVARG 109
>gi|224004408|ref|XP_002295855.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585887|gb|ACI64572.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 109
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 14 GTLKGFDQTINIILDDSHE-RVYSPTAGVEQ--VVLGLHIIRGDNIKIPTKISSSTRSPV 70
GTL+ FDQ N++L+D+ E R+ T Q V LGL+++RGD + + ++ V
Sbjct: 29 GTLRTFDQFANMVLEDTSERRILGETTTCYQADVKLGLYVVRGDVVVLMGEVDDEGSQEV 88
>gi|18394697|ref|NP_564072.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
gi|15724180|gb|AAL06482.1|AF411792_1 At1g19120/F14D16_26 [Arabidopsis thaliana]
gi|20334848|gb|AAM16180.1| At1g19120/F14D16_26 [Arabidopsis thaliana]
gi|332191686|gb|AEE29807.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
Length = 128
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+ FDQ N +L++++ERV + + LGL+IIRG+N+
Sbjct: 35 GLLRSFDQFANAVLEEAYERVIVGDLYCD-IPLGLYIIRGENV 76
>gi|391329361|ref|XP_003739143.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like [Metaseiulus occidentalis]
Length = 209
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 15/81 (18%)
Query: 12 FQGTLKGFDQTINIILDDSHE--RVYSPTAGV---EQVVLGLHIIRGDNIKIPTKISSST 66
F GT K FD+ +N+IL + E ++ + G E+ VLGL ++RG+NI +S +
Sbjct: 27 FIGTFKAFDKHMNLILTECEEFRKIKAKQGGQEREEKRVLGLVLLRGENI-----VSMTV 81
Query: 67 RSPVPDPQLTDNFILLPQIWG 87
P P P+ T LP++ G
Sbjct: 82 EGP-PPPEETG----LPRVPG 97
>gi|354548424|emb|CCE45160.1| hypothetical protein CPAR2_701720 [Candida parapsilosis]
Length = 90
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHI--IRGDNI 56
F+G L+G+D N++L D+ E ++S GVE ++ + +RGD++
Sbjct: 36 FKGKLQGYDSHCNLVLSDATETIFSDKDGVEPIIKRTEMVFVRGDSV 82
>gi|325187598|emb|CCA22134.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 67
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
F GTL+GFD +N++LDD E +P +G Q+ L ++ G+N+
Sbjct: 7 FVGTLRGFDDYVNMVLDDVTEFELTP-SGKRQIALDQVLLNGNNV 50
>gi|430811238|emb|CCJ31332.1| unnamed protein product [Pneumocystis jirovecii]
Length = 66
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L GFDQT N+I+ + E+++S V G +++RGDN+
Sbjct: 24 GHLTGFDQTTNLIISEVDEKLFSMEGTQVTKVDGAYLVRGDNM 66
>gi|440797084|gb|ELR18179.1| small nuclear ribonucleoprotein G, putative [Acanthamoeba
castellanii str. Neff]
Length = 76
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+GFDQ +N++L+D+ E V S E+ LG+ +IRG+++
Sbjct: 29 GILRGFDQFMNLVLEDTVEEVSS----TEKNELGMVVIRGNSV 67
>gi|126647281|ref|XP_001388059.1| small nuclear ribonucleoprotein [Cryptosporidium parvum Iowa II]
gi|126117147|gb|EAZ51247.1| small nuclear ribonucleoprotein, putative [Cryptosporidium parvum
Iowa II]
Length = 92
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+ +G ++GFD+ +NI+LD + E VY+ + +G ++RG+NI
Sbjct: 40 LVLEGVIQGFDEYMNIVLDQASE-VYTKKEVRRETSVGQLLLRGENI 85
>gi|395531172|ref|XP_003767656.1| PREDICTED: uncharacterized protein LOC100930096 [Sarcophilus
harrisii]
Length = 226
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 178 EGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 226
>gi|448117816|ref|XP_004203349.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|448120256|ref|XP_004203932.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|359384217|emb|CCE78921.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|359384800|emb|CCE78335.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
Length = 101
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPT--AGVEQVVLGLHIIRGDNI 56
F+G L+G+D + NIIL ER+ + + + + LGL+I+RG N+
Sbjct: 23 LFEGILEGYDNSTNIILKSCIERIINTSDHEHNQTIELGLYILRGGNV 70
>gi|227827656|ref|YP_002829436.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.14.25]
gi|227830352|ref|YP_002832132.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
L.S.2.15]
gi|229579169|ref|YP_002837567.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
Y.G.57.14]
gi|229582076|ref|YP_002840475.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
Y.N.15.51]
gi|229584860|ref|YP_002843362.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.16.27]
gi|238619824|ref|YP_002914650.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.16.4]
gi|284997857|ref|YP_003419624.1| Like-Sm ribonucleoprotein, core [Sulfolobus islandicus L.D.8.5]
gi|385773326|ref|YP_005645892.1| Sm ribonucleoprotein core-like protein [Sulfolobus islandicus
HVE10/4]
gi|385775964|ref|YP_005648532.1| archaeal Sm1 protein [Sulfolobus islandicus REY15A]
gi|227456800|gb|ACP35487.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus L.S.2.15]
gi|227459452|gb|ACP38138.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.14.25]
gi|228009883|gb|ACP45645.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus Y.G.57.14]
gi|228012792|gb|ACP48553.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus Y.N.15.51]
gi|228019910|gb|ACP55317.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.16.27]
gi|238380894|gb|ACR41982.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.16.4]
gi|284445752|gb|ADB87254.1| Like-Sm ribonucleoprotein, core [Sulfolobus islandicus L.D.8.5]
gi|323474712|gb|ADX85318.1| archaeal Sm1 protein [Sulfolobus islandicus REY15A]
gi|323477440|gb|ADX82678.1| Sm ribonucleoprotein core-like protein [Sulfolobus islandicus
HVE10/4]
Length = 76
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+GTL+ +DQ +N++L DS E + S +G + LG +IRGDN+
Sbjct: 27 VRGTLRSYDQHMNLVLSDSEE-IQSDGSGKK---LGTIVIRGDNV 67
>gi|313238876|emb|CBY13872.1| unnamed protein product [Oikopleura dioica]
gi|313241111|emb|CBY33408.1| unnamed protein product [Oikopleura dioica]
Length = 155
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 12 FQGTLKGFDQTINIILDDSHE-RVYSPTAG-----VEQVVLGLHIIRGDNIKIPTKISSS 65
F GT K FD+ +N+IL D E R P G E+ LGL ++RG+++ +S S
Sbjct: 26 FIGTFKAFDKHMNLILVDCDEFRRIKPKKGETAVREEKRTLGLVLLRGEHL-----VSLS 80
Query: 66 TRSPVPDPQLTDNFILLPQIWG 87
P P T +P + G
Sbjct: 81 VDGPPPQEHATARVPNMPNMGG 102
>gi|302309857|ref|XP_002999588.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049185|emb|CAR58061.1| unnamed protein product [Candida glabrata]
Length = 94
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQV----VLGLHIIRGDNIKIPTKIS 63
I +GT++GFD+ +N+++DD+ E +G E V LG +++GDNI + T I
Sbjct: 37 IRIRGTIRGFDEFMNVVIDDAVEVPIEAKSGRELVDQGTKLGRILLKGDNITLITPIE 94
>gi|326475987|gb|EGD99996.1| U6 snRNA-associated Sm-like protein LSm1 [Trichophyton tonsurans
CBS 112818]
gi|326485013|gb|EGE09023.1| small nuclear ribonucleoprotein [Trichophyton equinum CBS 127.97]
Length = 202
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
G L+ +DQ NI+L D+ ER+Y+ + + G+ ++RG+N+ + +I +P+P
Sbjct: 98 GVLRSWDQFANIVLQDTIERLYAENLYAD-IPRGVFLVRGENVLLLGEIDLDKDDDIPEP 156
>gi|327303990|ref|XP_003236687.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326462029|gb|EGD87482.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 201
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
G L+ +DQ NI+L D+ ER+Y+ + + G+ ++RG+N+ + +I +P+P
Sbjct: 97 GVLRSWDQFANIVLQDTIERLYAENLYAD-IPRGVFLVRGENVLLLGEIDLDKDDDIPEP 155
>gi|429853426|gb|ELA28500.1| small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 104
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
G L+G+D +NI+LD++ E G E+V LG+ +IRG+++ ++ ++T S
Sbjct: 28 GVLRGYDVFLNIVLDEAVE----EKEGGEKVRLGMVVIRGNSVVRGRELVATTAS 78
>gi|452988559|gb|EME88314.1| hypothetical protein MYCFIDRAFT_126773 [Pseudocercospora
fijiensis CIRAD86]
Length = 144
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 14 GTLKGFDQTINIILDDSHER--VYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L D+ ER V+ A +E+ GL ++RG+N+ I +I +P
Sbjct: 40 GVLRSWDQFGNLVLQDTIERLFVHDLYADIER---GLFLVRGENVLILGEIDLDKDDYIP 96
Query: 72 DP 73
+P
Sbjct: 97 EP 98
>gi|354484098|ref|XP_003504228.1| PREDICTED: hypothetical protein LOC100764959 [Cricetulus griseus]
Length = 195
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
I +G + GFD+ +N++LDD+ E ++S T +Q LG ++ GDN+ + +S+
Sbjct: 144 IRIEGCIIGFDEYMNLVLDDAEE-IHSKTKSRKQ--LGRIMLEGDNMTLLQSVSN 195
>gi|112253333|gb|ABI14254.1| small nuclear ribonucleoprotein polypeptide G [Pfiesteria
piscicida]
Length = 78
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+DQ +NI+LD++ E + SPT E+ +G+ +IRG++I
Sbjct: 30 GVLRGYDQFMNIVLDNTVE-IASPT---EKNEIGMVVIRGNSI 68
>gi|365984381|ref|XP_003669023.1| hypothetical protein NDAI_0C01190 [Naumovozyma dairenensis CBS
421]
gi|343767791|emb|CCD23780.1| hypothetical protein NDAI_0C01190 [Naumovozyma dairenensis CBS
421]
Length = 94
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVV----LGLHIIRGDNIKIPT 60
I G + GFD+ +N+++DD+ E P GVE LG +++GDNI + T
Sbjct: 37 IRITGKISGFDEFMNVVIDDAIEIPVDPKTGVENKAKGTQLGRIMLKGDNITLIT 91
>gi|409043237|gb|EKM52720.1| hypothetical protein PHACADRAFT_261323 [Phanerochaete carnosa
HHB-10118-sp]
Length = 94
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 14 GTLKGFDQTINIILDDSHERVYS-PTAGVEQVVLGLHIIRG 53
G LKGFDQ +N++LDD E++++ P Q LGL ++RG
Sbjct: 32 GVLKGFDQLLNLVLDDVEEQLHTEPLPSTRQ--LGLVVLRG 70
>gi|297829970|ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata]
gi|297328707|gb|EFH59126.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata]
Length = 128
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTL+ FDQ N +L+ + ERV + + LGL++IRG+N+ + ++ + R +P
Sbjct: 35 GTLRSFDQFANAVLEGACERVIVGEQYCD-IPLGLYVIRGENVVLIGELDTE-REELP 90
>gi|18400270|ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|30682974|ref|NP_850580.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|21536995|gb|AAM61336.1| Sm protein, putative [Arabidopsis thaliana]
gi|27754337|gb|AAO22620.1| putative Sm protein [Arabidopsis thaliana]
gi|28393853|gb|AAO42334.1| putative Sm protein [Arabidopsis thaliana]
gi|332641944|gb|AEE75465.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|332641945|gb|AEE75466.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
Length = 128
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTL+ FDQ N +L+ + ERV + + LGL++IRG+N+ + ++ + R +P
Sbjct: 35 GTLRSFDQFANAVLEGACERVIVGEQYCD-IPLGLYVIRGENVVLIGELDTE-REELP 90
>gi|406608168|emb|CCH40602.1| Small nuclear ribonucleoprotein-associated protein
[Wickerhamomyces ciferrii]
Length = 113
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 11 FFQGTLKGFDQTINIILDDSHERV-YSPTAGVEQVVLGLHIIRGD 54
+F G L+GFD N+IL ++ ERV Y + + LGL +IRGD
Sbjct: 36 YFVGILEGFDHLTNLILTETQERVIYQDEESIIE-DLGLQVIRGD 79
>gi|315051182|ref|XP_003174965.1| hypothetical protein MGYG_02493 [Arthroderma gypseum CBS 118893]
gi|311340280|gb|EFQ99482.1| hypothetical protein MGYG_02493 [Arthroderma gypseum CBS 118893]
Length = 204
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
G L+ +DQ NI+L D+ ER+Y+ + + G+ ++RG+N+ + +I +P+P
Sbjct: 100 GVLRSWDQFANIVLQDTVERLYAENLYAD-IPRGVFLVRGENVLLLGEIDLDKDDDIPEP 158
>gi|145230750|ref|XP_001389639.1| U6 snRNA-associated Sm-like protein LSm7 [Aspergillus niger CBS
513.88]
gi|134055758|emb|CAK44131.1| unnamed protein product [Aspergillus niger]
gi|350638639|gb|EHA26995.1| hypothetical protein ASPNIDRAFT_205537 [Aspergillus niger ATCC
1015]
Length = 136
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LDD E + LGL + RG
Sbjct: 73 GTLKGYDQLMNLVLDDVKESMRDDEGNENTRSLGLVVARG 112
>gi|50293209|ref|XP_449016.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528329|emb|CAG61986.1| unnamed protein product [Candida glabrata]
Length = 158
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAG-VEQVVLGLHIIRGDNI 56
+FF G L+ FDQ N+IL D ER+Y G + G+ +IRG+N+
Sbjct: 49 LFF-GVLRTFDQYANLILQDCVERIYVQENGEYAEEDRGIFMIRGENV 95
>gi|17544592|ref|NP_502034.1| Protein LSM-7 [Caenorhabditis elegans]
gi|3881724|emb|CAA93428.1| Protein LSM-7 [Caenorhabditis elegans]
Length = 104
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPT----AGVEQVVLGLHIIRGDNIKI 58
G L+GFDQ +N++LDD E + P G E LGL + RG I +
Sbjct: 36 GVLRGFDQLLNMVLDDCREYLRDPQNPSVVGDETRQLGLIVARGTAITV 84
>gi|302768987|ref|XP_002967913.1| hypothetical protein SELMODRAFT_227744 [Selaginella
moellendorffii]
gi|300164651|gb|EFJ31260.1| hypothetical protein SELMODRAFT_227744 [Selaginella
moellendorffii]
Length = 81
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%), Gaps = 5/45 (11%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G L+GFDQ +N++LD++ E +G E+ +G+ +IRG+++ +
Sbjct: 30 GVLRGFDQFMNLVLDNTME-----ISGNERTEIGMVVIRGNSVAM 69
>gi|301098772|ref|XP_002898478.1| U6 snRNA-associated Sm-like protein, putative [Phytophthora
infestans T30-4]
gi|262104903|gb|EEY62955.1| U6 snRNA-associated Sm-like protein, putative [Phytophthora
infestans T30-4]
Length = 106
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGV----EQVVLGLHIIRGDNIKIPTKISSSTRSP 69
GTLKG+DQ +N++LDD E + P+ E +GL + RG ++ + + + + P
Sbjct: 39 GTLKGYDQLVNLVLDDCVEFLRDPSDEYRITDETRKVGLVVCRGTSVMLVSPVDGTAEIP 98
Query: 70 VP 71
P
Sbjct: 99 NP 100
>gi|392563452|gb|EIW56631.1| U6 snRNA-associated Sm-like protein LSm7 [Trametes versicolor
FP-101664 SS1]
Length = 94
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G LKG+DQ +N++LD+ E + +P LGL ++RG I +
Sbjct: 32 GILKGYDQLLNLVLDEVQENLQTPDGESTTRNLGLVVLRGPTITL 76
>gi|407929252|gb|EKG22086.1| hypothetical protein MPH_00541 [Macrophomina phaseolina MS6]
Length = 81
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LD++ E AG E+V +G+ +IRG+++
Sbjct: 28 GVLRGYDVFLNIVLDEAVE----EKAGGEKVRIGMCVIRGNSV 66
>gi|355721057|gb|AES07138.1| small nuclear ribonucleoprotein polypeptide E [Mustela putorius
furo]
Length = 82
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS 63
+G + GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S
Sbjct: 35 EGCIIGFDEYMNLVLDDAEE-IHSKTKLRKQ--LGRIMLKGDNITLLQSVS 82
>gi|396471648|ref|XP_003838919.1| similar to small nuclear ribonucleoprotein G [Leptosphaeria
maculans JN3]
gi|312215488|emb|CBX95440.1| similar to small nuclear ribonucleoprotein G [Leptosphaeria
maculans JN3]
Length = 84
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LD++ E AG E+V +G+ +IRG+++
Sbjct: 28 GILRGYDVYLNIVLDEALE----EKAGGEKVRIGMVVIRGNSV 66
>gi|319401867|ref|NP_001187842.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
gi|308324118|gb|ADO29194.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
Length = 76
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 4/44 (9%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
QG L+GFD +N+++DDS E +AG +Q +G+ +IRG++I
Sbjct: 28 QGILRGFDPFMNLVVDDSIE----ISAGGQQNSIGMVVIRGNSI 67
>gi|444314665|ref|XP_004177990.1| hypothetical protein TBLA_0A06790 [Tetrapisispora blattae CBS
6284]
gi|387511029|emb|CCH58471.1| hypothetical protein TBLA_0A06790 [Tetrapisispora blattae CBS
6284]
Length = 91
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQV----VLGLHIIRGDNIKIPTKI 62
QG + GFD+ +N+++D++ E GVEQ+ LG +++GDNI + T +
Sbjct: 36 IQGKISGFDEFMNLVIDNAIEIPIDNVTGVEQIENGKKLGQILLKGDNITLITSV 90
>gi|9294633|dbj|BAB02972.1| unnamed protein product [Arabidopsis thaliana]
Length = 118
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTL+ FDQ N +L+ + ERV + + LGL++IRG+N+ + ++ + R +P
Sbjct: 25 GTLRSFDQFANAVLEGACERVIVGEQYCD-IPLGLYVIRGENVVLIGELDTE-REELP 80
>gi|425770497|gb|EKV08967.1| Small nuclear ribonucleoprotein (LSM7), putative [Penicillium
digitatum Pd1]
gi|425771863|gb|EKV10295.1| Small nuclear ribonucleoprotein (LSM7), putative [Penicillium
digitatum PHI26]
Length = 125
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKG+DQ +N++LDD E + +GL + RG I + + S P P
Sbjct: 62 GTLKGYDQLMNLVLDDVKETMRDEEGNTTTRSMGLIVARGTLIVLISPADGSEEIPNP 119
>gi|390176608|ref|XP_003736146.1| GA15004 [Drosophila pseudoobscura pseudoobscura]
gi|388858695|gb|EIM52219.1| GA15004 [Drosophila pseudoobscura pseudoobscura]
Length = 94
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSST 66
+G + GFD+ +N++LDD+ E VY T ++ LG +++GDNI + +S S
Sbjct: 43 EGHIVGFDEYMNLVLDDAEE-VYVKTR--QRKSLGRIMLKGDNITLIQNVSPSK 93
>gi|332222659|ref|XP_003260491.1| PREDICTED: small nuclear ribonucleoprotein E-like [Nomascus
leucogenys]
Length = 92
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LD++ E ++S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDEAEE-IHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|431900697|gb|ELK08143.1| Small nuclear ribonucleoprotein E [Pteropus alecto]
Length = 79
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+ + GFD+ +N++LDD+ E ++S T +QV G +++GDNI + +S+
Sbjct: 31 ESCIVGFDEYMNLVLDDAEE-IHSKTKSRKQV--GWIMLKGDNITLLQSVSN 79
>gi|321263450|ref|XP_003196443.1| U6 snRNA binding protein [Cryptococcus gattii WM276]
gi|317462919|gb|ADV24656.1| U6 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 111
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI--PTKISS--STRSP 69
G LKG+DQ +N+++DD E G LGL ++RG NI + PT SS S R P
Sbjct: 49 GILKGYDQLMNLVMDDVVEEYED---GRPTRSLGLVVLRGPNIVLVSPTDGSSGKSNRKP 105
Query: 70 VP 71
P
Sbjct: 106 FP 107
>gi|70983548|ref|XP_747301.1| small nuclear ribonucleoprotein SmG [Aspergillus fumigatus Af293]
gi|66844927|gb|EAL85263.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
fumigatus Af293]
gi|159123693|gb|EDP48812.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
fumigatus A1163]
Length = 78
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LD++ E G E+V +G+ +IRG+++
Sbjct: 28 GVLRGYDVFMNIVLDEAFE----EKQGGEKVAIGMVVIRGNSV 66
>gi|367017368|ref|XP_003683182.1| hypothetical protein TDEL_0H01120 [Torulaspora delbrueckii]
gi|359750846|emb|CCE93971.1| hypothetical protein TDEL_0H01120 [Torulaspora delbrueckii]
Length = 165
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAG-VEQVVLGLHIIRGDNI 56
G L+ FDQ N+IL+ ER+Y P + + GL ++RG+N+
Sbjct: 59 GVLRTFDQYANVILEHCVERIYVPESNQYAEETRGLFMVRGENV 102
>gi|295667135|ref|XP_002794117.1| hypothetical protein PAAG_03710 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226286223|gb|EEH41789.1| hypothetical protein PAAG_03710 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 155
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 10 IFFQGTLKGFDQTINIILDDSHE-RVYSPTAGVEQVVLGLHIIRGDNIKI 58
I +G ++GFD+ +N+++DD+ E R+ + T ++ LG +++GDN+ +
Sbjct: 101 IRIEGKIRGFDEFMNLVVDDAVEVRLATKTEEEKKRQLGQILLKGDNVSL 150
>gi|398407359|ref|XP_003855145.1| hypothetical protein MYCGRDRAFT_55886 [Zymoseptoria tritici
IPO323]
gi|339475029|gb|EGP90121.1| hypothetical protein MYCGRDRAFT_55886 [Zymoseptoria tritici
IPO323]
Length = 83
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LD+ E LGL ++RG
Sbjct: 17 GTLKGYDQLMNLVLDNVKEMTRDEEGNTSSRSLGLLVVRG 56
>gi|393228545|gb|EJD36188.1| U6 snRNA-associated Sm-like protein LSm7 [Auricularia delicata
TFB-10046 SS5]
Length = 116
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
G LKG+DQ +N++LDD E + P + LGL ++RG
Sbjct: 56 GILKGYDQLLNLVLDDVEEVIQEPEPRTRK--LGLAVLRG 93
>gi|348586080|ref|XP_003478798.1| PREDICTED: small nuclear ribonucleoprotein E-like [Cavia
porcellus]
Length = 92
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++LDD+ E +S T +Q LG +++GDNI + +S+
Sbjct: 44 EGCIIGFDEYMNLVLDDAEE-THSRTKSRKQ--LGQIMLKGDNITLLQSVSN 92
>gi|443899154|dbj|GAC76485.1| hypothetical protein PANT_22d00050 [Pseudozyma antarctica T-34]
Length = 536
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQV-----VLGLHIIRGDNI 56
QGTL+GFD +N+++DD+ E+V+ P AG V G ++RG+++
Sbjct: 28 QGTLRGFDMFLNLVVDDAIEQVH-PDAGNPNVWQDGERCGTVVVRGNSV 75
>gi|149238445|ref|XP_001525099.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451696|gb|EDK45952.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 96
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 11 FFQGTLKGFDQTINIILDDSHER-VYSPTAGVEQVVL------GLHIIRGDNIKIPTKIS 63
+F+GTL+GFD++ NIIL S ER +YS G++++RG+ I +I
Sbjct: 15 YFEGTLEGFDKSTNIILSKSIERIIYSKEDQENNNEENEEIESGVNVMRGNEIVCIGEID 74
Query: 64 SS 65
S
Sbjct: 75 ES 76
>gi|302840191|ref|XP_002951651.1| hypothetical protein VOLCADRAFT_109137 [Volvox carteri f.
nagariensis]
gi|300262899|gb|EFJ47102.1| hypothetical protein VOLCADRAFT_109137 [Volvox carteri f.
nagariensis]
Length = 108
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSP----TAGVEQVVLGLHIIRG 53
QG LKG+DQ +N++LD++ E + P T E +LGL + RG
Sbjct: 31 QGILKGYDQLLNLVLDEAVEYLRDPEDPLTVTDETRLLGLMVCRG 75
>gi|296473647|tpg|DAA15762.1| TPA: small nuclear ribonucleoprotein polypeptide E-like [Bos
taurus]
Length = 92
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
++ +G GFD+ +N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 41 MWTEGCTIGFDEYMNLVLDDA-EDIHSKTKSRKQ--LGRIMLKGDNITLLQSVSN 92
>gi|388582050|gb|EIM22356.1| Sm-like ribonucleo protein [Wallemia sebi CBS 633.66]
Length = 89
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+G + GFD+ +N+ILDD E Y + LG +++GDNI
Sbjct: 38 LEGRIIGFDEYMNVILDDVEEVFYGKKQSQPRNSLGRILLKGDNI 82
>gi|393247771|gb|EJD55278.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 136
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L+D+ ER Y +V G+ +IRG+N+ + +I VP
Sbjct: 33 GVLRSYDQFANLVLEDTIERFYH-GQNYGEVRRGVFLIRGENVVLLGEIDLDVEDQVP 89
>gi|255723090|ref|XP_002546479.1| hypothetical protein CTRG_05957 [Candida tropicalis MYA-3404]
gi|240130996|gb|EER30558.1| hypothetical protein CTRG_05957 [Candida tropicalis MYA-3404]
Length = 168
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVE-----QVVLGLHIIRGDNI 56
G L+ FDQ N++L D+ ER+Y G +V G+ ++RG+N+
Sbjct: 58 GILRTFDQFANLVLQDTFERIYLQEEGEAPARFGEVYRGVFMVRGENV 105
>gi|115491153|ref|XP_001210204.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197064|gb|EAU38764.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 78
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LD++ E G E+V +G+ +IRG+++
Sbjct: 28 GVLRGYDVFMNIVLDEAFE----EKQGGEKVAIGMVVIRGNSV 66
>gi|323447461|gb|EGB03380.1| hypothetical protein AURANDRAFT_72740 [Aureococcus anophagefferens]
Length = 129
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 14 GTLKGFDQTINIILDDSHERVY------SPTAGVEQVVLGLHIIRGDNIKIPTKISSSTR 67
G ++ FDQ N++L+D++ER S A V LGL++IRGD++ + +++
Sbjct: 36 GVMRSFDQFSNVVLEDTYERRVVIPDDESQPAVYGDVPLGLYVIRGDSVVLLGEVAEELE 95
Query: 68 SPVPDPQ 74
+ P+
Sbjct: 96 ASEDHPR 102
>gi|308491262|ref|XP_003107822.1| CRE-LSM-7 protein [Caenorhabditis remanei]
gi|308249769|gb|EFO93721.1| CRE-LSM-7 protein [Caenorhabditis remanei]
Length = 103
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPT----AGVEQVVLGLHIIRGDNIKI 58
G L+GFDQ +N++LDD E + P G E LGL + RG I +
Sbjct: 36 GVLRGFDQLLNMVLDDCREYLRDPQNPSVVGDETRPLGLIVARGTAITV 84
>gi|171694560|ref|XP_001912204.1| hypothetical protein [Podospora anserina S mat+]
gi|170947522|emb|CAP59683.1| unnamed protein product [Podospora anserina S mat+]
Length = 85
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI++DD+ E G E+V LG+ +IRG+++
Sbjct: 28 GVLRGYDVFLNIVMDDAVE----EKDGGEKVKLGMVVIRGNSV 66
>gi|390981169|pdb|4EMK|C Chain C, Crystal Structure Of Splsm567
Length = 113
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVV---LGLHIIRGDNIKIPTKISSSTRSPV 70
G LKGFDQ N++LDD E++ +P G LGL ++RG + + S P
Sbjct: 48 GILKGFDQLXNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPXDGSEEIPN 107
Query: 71 P 71
P
Sbjct: 108 P 108
>gi|302677314|ref|XP_003028340.1| hypothetical protein SCHCODRAFT_258381 [Schizophyllum commune H4-8]
gi|300102028|gb|EFI93437.1| hypothetical protein SCHCODRAFT_258381 [Schizophyllum commune H4-8]
Length = 118
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G LKG+DQ +N++LD+ E V P Q LGL ++RG I + + + S + P
Sbjct: 58 GLLKGYDQLLNLVLDEVTEDVLLPEP--HQRSLGLAVLRGPTITLVSPVDGSEQIANP 113
>gi|351721438|ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
Length = 128
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI-----------KIPTKI 62
GTL+ FDQ N +L+ + ERV + + LGL++IRG+N+ ++P +
Sbjct: 35 GTLRSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGELDLEREELPEHM 93
Query: 63 SSSTRSPVPDPQLTDNFILLPQIWGIERRTLSFMRF 98
+ + + + Q + + G R+ + F+ F
Sbjct: 94 TRVSTAEIKRAQKAEREA--SDLKGTMRKRMEFLDF 127
>gi|281212625|gb|EFA86785.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 82
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+GFD +NI+L D+ E Y EQ+ +G+ +IRG++I
Sbjct: 31 GILRGFDSFMNIVLKDTVEVTYPQ----EQINMGMVVIRGNSI 69
>gi|206694|gb|AAA42059.1| snRNP-associated polypeptide N [Rattus norvegicus]
Length = 240
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query: 11 FFQGTLKGFDQTINIILDDSHE-RVYSPTAGV-----EQVVLGLHIIRGDNIKIPTKISS 64
FF GT K FD+ +N+IL D E R P E+ VLGL ++RG+N+ +S
Sbjct: 26 FFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRVLGLVLLRGENL-----VSM 80
Query: 65 STRSPVPD 72
+ P P
Sbjct: 81 TVEGPPPK 88
>gi|225679918|gb|EEH18202.1| hypothetical protein PABG_00765 [Paracoccidioides brasiliensis
Pb03]
gi|226291688|gb|EEH47116.1| hypothetical protein PADG_03214 [Paracoccidioides brasiliensis
Pb18]
Length = 94
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 10 IFFQGTLKGFDQTINIILDDSHE-RVYSPTAGVEQVVLGLHIIRGDNIKI 58
I +G ++GFD+ +N+++DD+ E R+ + T + LG +++GDN+ +
Sbjct: 40 IRIEGKIRGFDEFMNLVVDDAVEVRLATKTEEERKRQLGQILLKGDNVSL 89
>gi|169598900|ref|XP_001792873.1| hypothetical protein SNOG_02259 [Phaeosphaeria nodorum SN15]
gi|160704495|gb|EAT90471.2| hypothetical protein SNOG_02259 [Phaeosphaeria nodorum SN15]
Length = 163
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LD+ E + + LGL + RG
Sbjct: 100 GTLKGYDQLMNLVLDEVKEALTDDEGNIRYRKLGLIVARG 139
>gi|367020158|ref|XP_003659364.1| hypothetical protein MYCTH_2296291 [Myceliophthora thermophila
ATCC 42464]
gi|347006631|gb|AEO54119.1| hypothetical protein MYCTH_2296291 [Myceliophthora thermophila
ATCC 42464]
Length = 97
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 14 GTLKGFDQTINIILDDSHERV-YSPTAGVE--QVVLGLHIIRGDNIKI 58
GTL D T N++L ++ ERV SP G +V LGL+I+RG+N+ +
Sbjct: 23 GTLAAHDHTTNLVLKNTVERVIRSPEDGEPSVEVPLGLYIVRGENVCV 70
>gi|327351953|gb|EGE80810.1| U6 snRNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 165
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LDD E + LGL + RG
Sbjct: 101 GTLKGYDQLMNLVLDDVKETMRDDEGNQTTRSLGLIVARG 140
>gi|297469885|ref|XP_002707307.1| PREDICTED: small nuclear ribonucleoprotein E [Bos taurus]
gi|297492936|ref|XP_002699974.1| PREDICTED: small nuclear ribonucleoprotein E [Bos taurus]
gi|296470897|tpg|DAA13012.1| TPA: small nuclear ribonucleoprotein polypeptide E-like [Bos
taurus]
Length = 164
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 116 EGCIIGFDEYRNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLIQSVSN 164
>gi|239612791|gb|EEQ89778.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 164
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LDD E + LGL + RG
Sbjct: 100 GTLKGYDQLMNLVLDDVKETMRDDEGNQTTRSLGLIVARG 139
>gi|261194282|ref|XP_002623546.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239588560|gb|EEQ71203.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 160
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LDD E + LGL + RG
Sbjct: 96 GTLKGYDQLMNLVLDDVKETMRDDEGNQTTRSLGLIVARG 135
>gi|440908733|gb|ELR58720.1| hypothetical protein M91_20943, partial [Bos grunniens mutus]
Length = 91
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ N++LDD+ E ++S T +Q LG +++GDNI + +S+
Sbjct: 43 EGCIIGFDEYRNLVLDDAEE-IHSKTKSRKQ--LGRIMLKGDNITLIQSVSN 91
>gi|451856356|gb|EMD69647.1| hypothetical protein COCSADRAFT_166623 [Cochliobolus sativus
ND90Pr]
Length = 98
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAG---VEQVVLGLHIIRGDNIKIPTKISSS 65
G L D ++N++L ++ ER+ P E+V LGL+IIRGD++ + ++
Sbjct: 23 GLLHSCDGSMNLVLQEATERIIRPVEEEIPSEEVPLGLYIIRGDSVAVVGRVDEE 77
>gi|451845213|gb|EMD58526.1| hypothetical protein COCSADRAFT_194481 [Cochliobolus sativus
ND90Pr]
Length = 136
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LD+ E + + LGL + RG
Sbjct: 73 GTLKGYDQLMNLVLDEVKEALTDEDGNIRYRKLGLIVARG 112
>gi|388853835|emb|CCF52556.1| related to LSM1-Sm-like (Lsm) protein [Ustilago hordei]
Length = 148
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L D+ ERV+ +V G+ ++RG+N+ + +I VP
Sbjct: 38 GVLRSYDQFANLVLQDTVERVFVGNR-YGDIVRGVFLVRGENVVLMGEIDLDAEDEVP 94
>gi|255076665|ref|XP_002502006.1| predicted protein [Micromonas sp. RCC299]
gi|226517271|gb|ACO63264.1| predicted protein [Micromonas sp. RCC299]
Length = 81
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 31/44 (70%), Gaps = 5/44 (11%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIK 57
G L+GFDQ +N++LD++H V G ++ LG+ ++RG++++
Sbjct: 28 GVLRGFDQFLNLVLDEAHNDV-----GPDKEPLGMVVVRGNSVQ 66
>gi|145353525|ref|XP_001421061.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581297|gb|ABO99354.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 72
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 5/43 (11%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
GTL+GFDQ +N++LDD+ S E+ +G+ ++RG+++
Sbjct: 17 GTLRGFDQFLNVVLDDATNDTTS-----EKTPMGMIVVRGNSV 54
>gi|321250537|ref|XP_003191841.1| hypothetical protein CGB_B0090W [Cryptococcus gattii WM276]
gi|317458309|gb|ADV20054.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 122
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTA-GVEQVVLGLHIIRGDNIKI 58
F GTL GFD +N++L D E Y TA G+ + LG ++ G+NI +
Sbjct: 29 FTGTLMGFDDYVNMVLKDVKE--YEVTASGITETDLGDTLLNGNNIAM 74
>gi|315046146|ref|XP_003172448.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|327305055|ref|XP_003237219.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|311342834|gb|EFR02037.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|326460217|gb|EGD85670.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|326472004|gb|EGD96013.1| small nuclear ribonucleoprotein SmG [Trichophyton tonsurans CBS
112818]
gi|326477131|gb|EGE01141.1| small nuclear ribonucleoprotein SmG [Trichophyton equinum CBS
127.97]
Length = 78
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LDD+ E G E+V LG+ +IRG+++
Sbjct: 28 GVLRGYDVFMNIVLDDAVE----EKNGGEKVPLGMVVIRGNSV 66
>gi|325181839|emb|CCA16294.1| small nuclear ribonucleoprotein homolog putative [Albugo
laibachii Nc14]
Length = 91
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
+G + GFD+ +NI+LD++ E ++ LG +++GD I + I STR+
Sbjct: 39 EGRIMGFDEYMNIVLDEAEE---VDVKKAKRAPLGRILLKGDTITLMMSIDGSTRA 91
>gi|386875009|ref|ZP_10117213.1| LSM domain protein [Candidatus Nitrosopumilus salaria BD31]
gi|386807169|gb|EIJ66584.1| LSM domain protein [Candidatus Nitrosopumilus salaria BD31]
Length = 74
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+GTL GFDQ +N++LD S E P G + LG ++RGDN+
Sbjct: 24 IRGTLLGFDQHMNLLLDSSEE---IPAEG-DSKSLGTIVVRGDNV 64
>gi|354545754|emb|CCE42482.1| hypothetical protein CPAR2_201250 [Candida parapsilosis]
Length = 164
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 12 FQGTLKGFDQTINIILDDSHERVY--SPTAGVEQVVLGLHIIRGDNI 56
F G L+ FDQ N++L D+ ER+Y ++ G+ I+RG+N+
Sbjct: 55 FFGILRTFDQFANLVLQDTFERIYVEGEPKKFGEIYRGVFIVRGENV 101
>gi|453087944|gb|EMF15985.1| U6 snRNA-associated Sm-like protein LSm7 [Mycosphaerella populorum
SO2202]
Length = 134
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKGFDQ +N++LD+ E LGL + RG
Sbjct: 68 GTLKGFDQLMNLVLDNVKETTRDEEGNTSTRNLGLLVARG 107
>gi|308321244|gb|ADO27774.1| small nuclear ribonucleoprotein g [Ictalurus furcatus]
Length = 76
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 4/44 (9%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
QG L+GFD +N+++DDS E +AG +Q +G+ +IRG++I
Sbjct: 28 QGILRGFDPFMNLVVDDSIE----ISAGGQQNPIGMVVIRGNSI 67
>gi|261204379|ref|XP_002629403.1| small nuclear ribonucleoprotein E [Ajellomyces dermatitidis
SLH14081]
gi|239587188|gb|EEQ69831.1| small nuclear ribonucleoprotein E [Ajellomyces dermatitidis
SLH14081]
gi|239614272|gb|EEQ91259.1| small nuclear ribonucleoprotein E [Ajellomyces dermatitidis ER-3]
gi|327356357|gb|EGE85214.1| small nuclear ribonucleoprotein E [Ajellomyces dermatitidis ATCC
18188]
Length = 94
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 10 IFFQGTLKGFDQTINIILDDSHE-RVYSPTAGVEQVVLGLHIIRGDNIKI 58
I +G ++GFD+ +N+++DD+ E R+ + T ++ LG +++GDN+ +
Sbjct: 40 IRIEGKIRGFDEFMNLVVDDAVEVRLATKTEEEKRRQLGQILLKGDNVSL 89
>gi|146418329|ref|XP_001485130.1| hypothetical protein PGUG_02859 [Meyerozyma guilliermondii ATCC
6260]
gi|146390603|gb|EDK38761.1| hypothetical protein PGUG_02859 [Meyerozyma guilliermondii ATCC
6260]
Length = 97
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 12 FQGTLKGFDQTINIILDDSHER-VYSPTAGVEQVV-LGLHIIRGDNI 56
F+G L+GFD + NIIL +E +Y Q + LG++ +RG N+
Sbjct: 25 FEGILEGFDNSTNIILSSCYEHIIYEEEDEENQAIPLGVYFMRGGNV 71
>gi|403214323|emb|CCK68824.1| hypothetical protein KNAG_0B03830 [Kazachstania naganishii CBS
8797]
Length = 90
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 13 QGTLKGFDQTINIILDDSHE----RVYSPTAGVEQVVLGLHIIRGDNIKIPT 60
+G ++GFD+ +N+++D++ E + G + V LG +++GDNI + T
Sbjct: 34 RGKIRGFDEFMNVVVDEAEEVPLDKATGREIGEKSVTLGRILLKGDNITLIT 85
>gi|194761826|ref|XP_001963124.1| GF14098 [Drosophila ananassae]
gi|190616821|gb|EDV32345.1| GF14098 [Drosophila ananassae]
Length = 199
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 12 FQGTLKGFDQTINIILDDSHE--RVYSPTAGV----EQVVLGLHIIRGDNI 56
F GT K FD+ +N+IL D E ++ S + V E+ VLG ++RG+NI
Sbjct: 27 FIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77
>gi|428180050|gb|EKX48919.1| hypothetical protein GUITHDRAFT_93594 [Guillardia theta CCMP2712]
Length = 94
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
F GTL+GFD +N++L+D E +P G + L ++ G+NI
Sbjct: 33 FVGTLQGFDDYVNMVLEDVTEFEVNPDGGYRETKLDQILLNGNNI 77
>gi|302772304|ref|XP_002969570.1| hypothetical protein SELMODRAFT_146440 [Selaginella
moellendorffii]
gi|302774851|ref|XP_002970842.1| hypothetical protein SELMODRAFT_94071 [Selaginella
moellendorffii]
gi|300161553|gb|EFJ28168.1| hypothetical protein SELMODRAFT_94071 [Selaginella
moellendorffii]
gi|300163046|gb|EFJ29658.1| hypothetical protein SELMODRAFT_146440 [Selaginella
moellendorffii]
Length = 127
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
GTL+ FDQ N++L+ + ER+ + + LGL+IIRG+N+ + ++ + +
Sbjct: 34 GTLRSFDQFANLVLEKAVERIIVGDLYCD-LPLGLYIIRGENVVLVGELDQTKKD 87
>gi|315043418|ref|XP_003171085.1| RH73529p [Arthroderma gypseum CBS 118893]
gi|311344874|gb|EFR04077.1| RH73529p [Arthroderma gypseum CBS 118893]
Length = 151
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
G LKG+DQ +N++LDD E + V LGL + RG
Sbjct: 87 GVLKGYDQLMNLVLDDVKETMRDDNDNVTTRSLGLIVARG 126
>gi|145352933|ref|XP_001420788.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581023|gb|ABO99081.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 126
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSS 65
GTL+ FDQ NI+L+ + ER+ + LGL+I+RG+N+ + + ++
Sbjct: 33 GTLRSFDQFANIVLESAVERIIVGKM-FSDIPLGLYIVRGENVVLMGDVGAN 83
>gi|453089025|gb|EMF17065.1| Sm-like ribonucleo protein [Mycosphaerella populorum SO2202]
Length = 155
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 14 GTLKGFDQTINIILDDSHER--VYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L D+ ER V+ A +E+ GL ++RG+N+ + +I VP
Sbjct: 51 GVLRSWDQFGNLVLQDTVERLFVHHLYADIER---GLFLVRGENVLLLGEIDLDKDDYVP 107
Query: 72 DP 73
+P
Sbjct: 108 EP 109
>gi|268536210|ref|XP_002633240.1| C. briggsae CBR-LSM-7 protein [Caenorhabditis briggsae]
Length = 103
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTA----GVEQVVLGLHIIRGDNIKI 58
G L+GFDQ +N++LDD E + P G E LGL + RG I +
Sbjct: 36 GVLRGFDQLLNMVLDDCREYLRDPQNPSVIGDETRPLGLIVARGTAITV 84
>gi|448525435|ref|XP_003869115.1| Lsm1 protein [Candida orthopsilosis Co 90-125]
gi|380353468|emb|CCG22978.1| Lsm1 protein [Candida orthopsilosis]
Length = 162
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 12 FQGTLKGFDQTINIILDDSHERVY--SPTAGVEQVVLGLHIIRGDNI 56
F G L+ FDQ N++L D+ ER+Y ++ G+ I+RG+N+
Sbjct: 53 FFGILRTFDQFANLVLQDTFERIYVEGEPKKFGEIYRGVFIVRGENV 99
>gi|346978215|gb|EGY21667.1| hypothetical protein VDAG_03107 [Verticillium dahliae VdLs.17]
Length = 99
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVE---QVVLGLHIIRGDNI 56
G L D N+ L D+HERV E +V LGL+++RGDN+
Sbjct: 24 GNLVASDNNTNLALSDAHERVIQTPDADEPSVEVPLGLYMVRGDNV 69
>gi|189210563|ref|XP_001941613.1| small nuclear ribonucleoprotein E [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330923223|ref|XP_003300153.1| hypothetical protein PTT_11315 [Pyrenophora teres f. teres 0-1]
gi|187977706|gb|EDU44332.1| small nuclear ribonucleoprotein E [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325858|gb|EFQ91754.1| hypothetical protein PTT_11315 [Pyrenophora teres f. teres 0-1]
Length = 93
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 13 QGTLKGFDQTINIILDDSHE-RVYSPTAGVEQVVLGLHIIRGDNI 56
+G L+GFD+ +N+++DD+ E ++ A E+ +G +++GDNI
Sbjct: 43 EGKLRGFDEFMNLVIDDAIEVKLAKKDAPEERRKVGQILLKGDNI 87
>gi|156031032|ref|XP_001584841.1| hypothetical protein SS1G_14124 [Sclerotinia sclerotiorum 1980]
gi|154700515|gb|EDO00254.1| hypothetical protein SS1G_14124 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 138
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
+GTLKG+D +N++LDD E++ LGL + RG
Sbjct: 74 KGTLKGYDALMNLVLDDVEEKLTDDEGNEAWRALGLVVARG 114
>gi|255717787|ref|XP_002555174.1| KLTH0G03102p [Lachancea thermotolerans]
gi|238936558|emb|CAR24737.1| KLTH0G03102p [Lachancea thermotolerans CBS 6340]
Length = 94
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVE----QVVLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N+++DD+ E G E V LG +++GDNI + T +S
Sbjct: 39 RGRISGFDEFMNVVIDDASEIPIDTKTGSELPDQAVKLGRILLKGDNITLITPVSD 94
>gi|340344088|ref|ZP_08667220.1| Like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519229|gb|EGP92952.1| Like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 78
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+G L GFDQ +N++LD S E PT G + LG ++RGDN+
Sbjct: 28 IRGNLLGFDQHMNLLLDSSEE---IPTEGNSK-SLGTIVVRGDNV 68
>gi|210076097|ref|XP_002143124.1| YALI0F30426p [Yarrowia lipolytica]
gi|199424991|emb|CAR65212.1| YALI0F30426p [Yarrowia lipolytica CLIB122]
Length = 165
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 11/55 (20%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPT--------AGVEQ---VVLGLHIIRGDNI 56
+GTLKG+DQ +N+ILDD E +Y G ++ +GL +IRG N+
Sbjct: 89 EGTLKGWDQLMNLILDDVKETIYEDEESEDFAEFEGQKEGKVREIGLAVIRGPNL 143
>gi|357450125|ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355484387|gb|AES65590.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
Length = 128
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI-----------KIPTKI 62
G L+ FDQ N++L+ + ERV + V LGL++IRG+N+ ++P +
Sbjct: 35 GLLRSFDQFANVVLEGACERVIVGDLYCD-VPLGLYVIRGENVVLIGELDLGKEELPPHM 93
Query: 63 SSSTRSPVPDPQLTDNFILLPQIWGIERRTLSFMRF 98
+ + + + Q + + G R+ + F+ F
Sbjct: 94 TCVSEADIRKAQKAERDA--SDLKGTMRKRMEFLDF 127
>gi|361126108|gb|EHK98124.1| putative small nuclear ribonucleoprotein G [Glarea lozoyensis
74030]
Length = 85
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LDD+ E G E+V LG+ +IRG+++
Sbjct: 28 GVLRGYDVFLNIVLDDAVE----EKDGGEKVRLGMVVIRGNSV 66
>gi|255943851|ref|XP_002562693.1| Pc20g01340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587428|emb|CAP85463.1| Pc20g01340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 100
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 13 QGTLKGFDQTINIILDDSHE-RVYSPTAGVEQVVLGLHIIRGDNIKI 58
+G ++GFD+ +N+++DD+ E R+ + T ++ LG +++GDN+ +
Sbjct: 50 EGKIRGFDEFMNLVIDDAVEVRLATKTEEEKRRPLGQILLKGDNVSL 96
>gi|448118085|ref|XP_004203416.1| Piso0_001025 [Millerozyma farinosa CBS 7064]
gi|448120526|ref|XP_004203999.1| Piso0_001025 [Millerozyma farinosa CBS 7064]
gi|359384284|emb|CCE78988.1| Piso0_001025 [Millerozyma farinosa CBS 7064]
gi|359384867|emb|CCE78402.1| Piso0_001025 [Millerozyma farinosa CBS 7064]
Length = 90
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
QG ++GFD+ +NI++DD+ E S G + LG +++GDNI
Sbjct: 42 QGKIRGFDEFMNIVIDDAKE--ISTEDGSSE-ALGRILLKGDNI 82
>gi|317139460|ref|XP_003189167.1| small nuclear ribonucleoprotein E [Aspergillus oryzae RIB40]
Length = 95
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 13 QGTLKGFDQTINIILDDSHE-RVYSPTAGVEQVVLGLHIIRGDNIKI 58
+G ++GFD+ +N+++DD+ E R+ + T ++ LG +++GDN+ +
Sbjct: 44 EGKIRGFDEFMNLVVDDAVEVRLATKTGEEKRRPLGQILLKGDNVSL 90
>gi|198475808|ref|XP_001357165.2| GA18820 [Drosophila pseudoobscura pseudoobscura]
gi|198137969|gb|EAL34232.2| GA18820 [Drosophila pseudoobscura pseudoobscura]
Length = 191
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 12 FQGTLKGFDQTINIILDDSHE--RVYSPTAGV----EQVVLGLHIIRGDNI 56
F GT K FD+ +N+IL D E ++ S + V E+ VLG ++RG+NI
Sbjct: 19 FIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 69
>gi|195146742|ref|XP_002014343.1| GL19145 [Drosophila persimilis]
gi|194106296|gb|EDW28339.1| GL19145 [Drosophila persimilis]
Length = 205
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 12 FQGTLKGFDQTINIILDDSHE--RVYSPTAGV----EQVVLGLHIIRGDNI 56
F GT K FD+ +N+IL D E ++ S + V E+ VLG ++RG+NI
Sbjct: 33 FIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 83
>gi|145349929|ref|XP_001419379.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579610|gb|ABO97672.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 100
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGV----EQVVLGLHIIRGDNIKIPTKISS 64
GTLKG+DQ +N++LD++ E + + E LGL + RG ++ + + + S
Sbjct: 30 GTLKGYDQLLNLVLDEAIEHLRDAEDALKISDETRALGLLVCRGTSVMVVSALDS 84
>gi|320544917|ref|NP_001188780.1| small ribonucleoprotein particle protein SmB [Drosophila
melanogaster]
gi|10720262|sp|Q05856.1|RSMB_DROME RecName: Full=Small nuclear ribonucleoprotein-associated protein
B; Short=snRNP-B; AltName: Full=Sm protein B;
Short=Sm-B; Short=SmB
gi|290272|gb|AAA28858.1| ribonucleoprotein [Drosophila melanogaster]
gi|16769000|gb|AAL28719.1| LD14049p [Drosophila melanogaster]
gi|220952928|gb|ACL89007.1| SmB-PA [synthetic construct]
gi|318068414|gb|ADV37030.1| small ribonucleoprotein particle protein SmB [Drosophila
melanogaster]
Length = 199
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 12 FQGTLKGFDQTINIILDDSHE--RVYSPTAGV----EQVVLGLHIIRGDNI 56
F GT K FD+ +N+IL D E ++ S + V E+ VLG ++RG+NI
Sbjct: 27 FIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77
>gi|406865394|gb|EKD18436.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 83
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LDD+ E G E+V LG+ +IRG+++
Sbjct: 28 GILRGYDVFLNIVLDDAVE----EKDGGEKVRLGMVVIRGNSV 66
>gi|225561488|gb|EEH09768.1| predicted protein [Ajellomyces capsulatus G186AR]
Length = 174
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LDD E + LGL + RG
Sbjct: 110 GTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSLGLIVARG 149
>gi|194859949|ref|XP_001969485.1| GG23931 [Drosophila erecta]
gi|195473671|ref|XP_002089116.1| SmB [Drosophila yakuba]
gi|38048415|gb|AAR10110.1| similar to Drosophila melanogaster SmB, partial [Drosophila
yakuba]
gi|190661352|gb|EDV58544.1| GG23931 [Drosophila erecta]
gi|194175217|gb|EDW88828.1| SmB [Drosophila yakuba]
Length = 199
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 12 FQGTLKGFDQTINIILDDSHE--RVYSPTAGV----EQVVLGLHIIRGDNI 56
F GT K FD+ +N+IL D E ++ S + V E+ VLG ++RG+NI
Sbjct: 27 FIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77
>gi|340960769|gb|EGS21950.1| small nuclear ribonucleoprotein E-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 98
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVV--LGLHIIRGDNIKIPTKISSST 66
I G ++GFD+ +N+++DD+ E SP + LG +++GDNI + +S S
Sbjct: 40 IRITGVIRGFDEFMNLVIDDAVEIKLSPKTNEPESKRPLGQILLKGDNISLIQALSGSA 98
>gi|384494127|gb|EIE84618.1| hypothetical protein RO3G_09328 [Rhizopus delemar RA 99-880]
Length = 125
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
G L+ FDQ N++L D+ ER+Y + G+ +IRG+N+ + +I +
Sbjct: 35 GILRSFDQFANLVLQDTIERIYVRGC-YGDIPRGVFLIRGENVVLLGEIDVDKEDQINLR 93
Query: 74 QLTDNFILLPQ 84
Q++ IL+ Q
Sbjct: 94 QVSVEEILVAQ 104
>gi|396458899|ref|XP_003834062.1| similar to small nuclear ribonucleoprotein E [Leptosphaeria
maculans JN3]
gi|312210611|emb|CBX90697.1| similar to small nuclear ribonucleoprotein E [Leptosphaeria
maculans JN3]
Length = 94
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 13 QGTLKGFDQTINIILDDSHE-RVYSPTAGVEQVVLGLHIIRGDNIKIPTKIS 63
+G L+GFD+ +N+++DD+ E + A E+ +G +++GDNI + ++S
Sbjct: 43 EGKLRGFDEFMNLVIDDAVEVTLAKKDAPEERRKVGQILLKGDNISLIQQLS 94
>gi|238482745|ref|XP_002372611.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus flavus
NRRL3357]
gi|220700661|gb|EED56999.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus flavus
NRRL3357]
Length = 95
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 13 QGTLKGFDQTINIILDDSHE-RVYSPTAGVEQVVLGLHIIRGDNIKI 58
+G ++GFD+ +N+++DD+ E R+ + T ++ LG +++GDN+ +
Sbjct: 44 EGKIRGFDEFMNLVVDDAVEVRLATKTEEEKRRPLGQILLKGDNVSL 90
>gi|67522076|ref|XP_659099.1| hypothetical protein AN1495.2 [Aspergillus nidulans FGSC A4]
gi|40744652|gb|EAA63808.1| hypothetical protein AN1495.2 [Aspergillus nidulans FGSC A4]
gi|259486817|tpe|CBF84982.1| TPA: small nuclear ribonucleoprotein SmG, putative
(AFU_orthologue; AFUA_8G04960) [Aspergillus nidulans
FGSC A4]
Length = 78
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LD++ E G E+V +G+ +IRG+++
Sbjct: 28 GVLRGYDVFMNIVLDEAFEE----KPGGEKVAIGMIVIRGNSV 66
>gi|221060398|ref|XP_002260844.1| ribonucleoprotein [Plasmodium knowlesi strain H]
gi|193810918|emb|CAQ42816.1| ribonucleoprotein, putative [Plasmodium knowlesi strain H]
Length = 201
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 5 TILSLIFFQGTLKGFDQTINIILDDSHE--RVYSPTAGVEQV--VLGLHIIRGDNI 56
T+ +F GT +D+ +NI+L D+ E RV S +++ V+GL +IRG+NI
Sbjct: 18 TVSDTRYFVGTFLSYDRHMNIVLVDAEEFRRVKSQENSSKEIKRVIGLILIRGENI 73
>gi|154282731|ref|XP_001542161.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410341|gb|EDN05729.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 171
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LDD E + LGL + RG
Sbjct: 107 GTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSLGLIVARG 146
>gi|195339821|ref|XP_002036515.1| GM11667 [Drosophila sechellia]
gi|195578207|ref|XP_002078957.1| GD22258 [Drosophila simulans]
gi|194130395|gb|EDW52438.1| GM11667 [Drosophila sechellia]
gi|194190966|gb|EDX04542.1| GD22258 [Drosophila simulans]
Length = 199
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 12 FQGTLKGFDQTINIILDDSHE--RVYSPTAGV----EQVVLGLHIIRGDNI 56
F GT K FD+ +N+IL D E ++ S + V E+ VLG ++RG+NI
Sbjct: 27 FIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77
>gi|154300461|ref|XP_001550646.1| hypothetical protein BC1G_11054 [Botryotinia fuckeliana B05.10]
gi|347828363|emb|CCD44060.1| similar to small nuclear ribonucleoprotein g [Botryotinia
fuckeliana]
Length = 85
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LDD+ E G E+V +G+ +IRG+++
Sbjct: 28 GVLRGYDVFLNIVLDDAVE----EKEGGEKVKIGMVVIRGNSV 66
>gi|71012485|ref|XP_758502.1| hypothetical protein UM02355.1 [Ustilago maydis 521]
gi|46098160|gb|EAK83393.1| hypothetical protein UM02355.1 [Ustilago maydis 521]
Length = 175
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVV--LGLHIIRG 53
GTLKGFDQ +N+++D+ E V V LGL ++RG
Sbjct: 111 GTLKGFDQLMNLVMDEVTESVRDEEGNVTDKTRNLGLVVLRG 152
>gi|367001997|ref|XP_003685733.1| hypothetical protein TPHA_0E02070 [Tetrapisispora phaffii CBS
4417]
gi|357524032|emb|CCE63299.1| hypothetical protein TPHA_0E02070 [Tetrapisispora phaffii CBS
4417]
Length = 94
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVV----LGLHIIRGDNIKIPTKISSS 65
+G + GFD+ +N+++D++ E G+E+V LG +++GDNI + T + +
Sbjct: 38 RGKVAGFDEFMNVVIDNAIEIPVDAETGIERVTDGKKLGRILLKGDNITLITTVDEN 94
>gi|357514091|ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
Length = 131
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
GTL+ FDQ N +L+ + ERV + + LGL++IRG+N+
Sbjct: 35 GTLRSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENV 76
>gi|195118784|ref|XP_002003916.1| GI18165 [Drosophila mojavensis]
gi|195384904|ref|XP_002051152.1| GJ14598 [Drosophila virilis]
gi|193914491|gb|EDW13358.1| GI18165 [Drosophila mojavensis]
gi|194147609|gb|EDW63307.1| GJ14598 [Drosophila virilis]
Length = 198
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 12 FQGTLKGFDQTINIILDDSHE--RVYSPTAGV----EQVVLGLHIIRGDNI 56
F GT K FD+ +N+IL D E ++ S + V E+ VLG ++RG+NI
Sbjct: 27 FIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77
>gi|156040265|ref|XP_001587119.1| hypothetical protein SS1G_12149 [Sclerotinia sclerotiorum 1980]
gi|154696205|gb|EDN95943.1| hypothetical protein SS1G_12149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 84
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LDD+ E G E+V +G+ +IRG+++
Sbjct: 28 GVLRGYDVFLNIVLDDAVE----EKEGGEKVKIGMVVIRGNSV 66
>gi|356560171|ref|XP_003548368.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Glycine
max]
Length = 121
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI-----------KIPTKI 62
GTL+ FDQ N +L+ + ERV + + LGL++IRG+N+ ++P +
Sbjct: 28 GTLRSFDQFANAVLEGACERVIVGDLYCD-IPLGLYVIRGENVVLIGELDLEREELPEHM 86
Query: 63 SSSTRSPVPDPQLTDNFILLPQIWGIERRTLSFMRF 98
+ + + + Q + + G R+ + F+ F
Sbjct: 87 TRVSTAEIKRAQKAEREA--SDLKGTMRKRMEFLDF 120
>gi|336379227|gb|EGO20383.1| hypothetical protein SERLADRAFT_352208 [Serpula lacrymans var.
lacrymans S7.9]
Length = 63
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G LKG+DQ +N++LD+ E++ P LGL ++RG I +
Sbjct: 3 GILKGYDQLLNLVLDEVEEQINEPEPHSRS--LGLAVLRGPTITL 45
>gi|301107352|ref|XP_002902758.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097876|gb|EEY55928.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 62
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
F GTL+GFD +N++LDD E +P G +V L ++ G+N+
Sbjct: 7 FLGTLRGFDDYVNMVLDDVTEYEITP-EGKREVKLDQVLLNGNNV 50
>gi|154314610|ref|XP_001556629.1| predicted protein [Botryotinia fuckeliana B05.10]
gi|347831950|emb|CCD47647.1| similar to small nuclear ribonucleoprotein Lsm8 [Botryotinia
fuckeliana]
Length = 98
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVE---QVVLGLHIIRGDNIKI 58
GTL DQ N++L + ER+ P +E +V GL++IRGDN+ +
Sbjct: 23 GTLLSCDQQTNLVLSQTIERIIRPPEDIEASSEVPHGLYLIRGDNVVV 70
>gi|315041917|ref|XP_003170335.1| LSM domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311345369|gb|EFR04572.1| LSM domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 95
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 10 IFFQGTLKGFDQTINIILDDSHE-RVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
+ +G ++GFD+ +N+++DD+ E ++ + T + LG +++GDN+ + + S
Sbjct: 40 VRIEGKIRGFDEFMNLVVDDAVEVKLATKTEAESRRQLGQILLKGDNVSLIQTVQS 95
>gi|195051180|ref|XP_001993048.1| GH13302 [Drosophila grimshawi]
gi|193900107|gb|EDV98973.1| GH13302 [Drosophila grimshawi]
Length = 198
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 12 FQGTLKGFDQTINIILDDSHE--RVYSPTAGV----EQVVLGLHIIRGDNI 56
F GT K FD+ +N+IL D E ++ S + V E+ VLG ++RG+NI
Sbjct: 27 FIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77
>gi|440492571|gb|ELQ75126.1| Small Nuclear ribonucleoprotein splicing factor
[Trachipleistophora hominis]
Length = 106
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 11 FFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+ G L+ FDQ NI L+ + R++ E+ LGLH+IRG+NI
Sbjct: 28 YMYGILRSFDQFNNITLEQTVCRIFIDDEYAERR-LGLHVIRGENI 72
>gi|71017769|ref|XP_759115.1| hypothetical protein UM02968.1 [Ustilago maydis 521]
gi|46098907|gb|EAK84140.1| hypothetical protein UM02968.1 [Ustilago maydis 521]
Length = 148
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L D+ ERV+ V G+ ++RG+N+ + +I VP
Sbjct: 38 GVLRSYDQFANLVLQDTVERVFVGNR-YGDVARGIFLVRGENVVLMGEIDLDAEDEVP 94
>gi|367043690|ref|XP_003652225.1| hypothetical protein THITE_2087360 [Thielavia terrestris NRRL
8126]
gi|346999487|gb|AEO65889.1| hypothetical protein THITE_2087360 [Thielavia terrestris NRRL
8126]
Length = 97
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 14 GTLKGFDQTINIILDDSHERV-YSPTAG--VEQVVLGLHIIRGDNI 56
GTL D T N++L ++ ERV +P G +V LGL+IIRG+N+
Sbjct: 23 GTLAAHDHTTNLVLKNTVERVIRTPDEGEPSVEVPLGLYIIRGENV 68
>gi|448535532|ref|XP_003870996.1| Smx4 component of heteroheptameric complexes (Lsm1p, Lsm8p)
[Candida orthopsilosis Co 90-125]
gi|380355352|emb|CCG24870.1| Smx4 component of heteroheptameric complexes (Lsm1p, Lsm8p)
[Candida orthopsilosis]
Length = 91
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHI--IRGDNI 56
F+G L+G+D N++L D+ E ++S GV+ ++ + +RGD++
Sbjct: 36 FKGKLQGYDSHCNLVLSDATETIFSDKDGVDPIIKRTEMVFVRGDSV 82
>gi|452002106|gb|EMD94564.1| hypothetical protein COCHEDRAFT_1221931 [Cochliobolus
heterostrophus C5]
Length = 135
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LD+ E + + LGL + RG
Sbjct: 72 GTLKGYDQLMNLVLDEVKEALTDEHGNIRYRKLGLIVARG 111
>gi|330827552|ref|XP_003291838.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
gi|325077961|gb|EGC31640.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
Length = 78
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
QG L+GFD +NI L D+ E V SPT E+ +G+ +IRG++I
Sbjct: 30 QGILRGFDTFMNIALKDTVE-VVSPT---EKYEIGMVLIRGNSI 69
>gi|384497931|gb|EIE88422.1| hypothetical protein RO3G_13133 [Rhizopus delemar RA 99-880]
Length = 76
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%), Gaps = 4/45 (8%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
G L+G+D +NI+LD++ E V SPT E+ +G+ +IRG++I I
Sbjct: 29 GVLRGYDPFMNIVLDETVEEV-SPT---ERNNIGMVVIRGNSIAI 69
>gi|195434134|ref|XP_002065058.1| GK14876 [Drosophila willistoni]
gi|194161143|gb|EDW76044.1| GK14876 [Drosophila willistoni]
Length = 191
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 12 FQGTLKGFDQTINIILDDSHE--RVYSPTAGV----EQVVLGLHIIRGDNI 56
F GT K FD+ +N+IL D E ++ S + V E+ VLG ++RG+NI
Sbjct: 19 FIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 69
>gi|84994586|ref|XP_952015.1| small nuclear ribonucleoprotein [Theileria annulata strain
Ankara]
gi|65302176|emb|CAI74283.1| small nuclear ribonucleoprotein, putative [Theileria annulata]
Length = 82
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 5/43 (11%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LD++ E V G EQV LG+ ++RG++I
Sbjct: 33 GVLRGYDTFMNIVLDNALEVV-----GEEQVDLGVVVVRGNSI 70
>gi|396489534|ref|XP_003843128.1| hypothetical protein LEMA_P088880.1 [Leptosphaeria maculans JN3]
gi|312219706|emb|CBX99649.1| hypothetical protein LEMA_P088880.1 [Leptosphaeria maculans JN3]
Length = 202
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LD+ E + + LGL + RG
Sbjct: 138 GTLKGYDQLMNLVLDEVKEALTDDEGNIRYRKLGLIVARG 177
>gi|240274594|gb|EER38110.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
gi|325090925|gb|EGC44235.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 169
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LDD E + LGL + RG
Sbjct: 105 GTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSLGLIVARG 144
>gi|388579402|gb|EIM19726.1| LSM-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 87
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
F GTL+GFD +N++LDD E SP ++ L ++ G+N+
Sbjct: 29 FVGTLQGFDDFVNMVLDDVTEYDISPDGTQKKSKLRQTLLNGNNV 73
>gi|403164177|ref|XP_003324247.2| hypothetical protein PGTG_05053 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164920|gb|EFP79828.2| hypothetical protein PGTG_05053 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 142
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPV 70
G L+ +DQ N++L D+ ER++ + G++++RG+N+ + +I +
Sbjct: 36 GVLRSYDQFANLVLQDTIERIHDGICKYTDIWRGIYLVRGENVVLLGEIDLDKEDEI 92
>gi|299740998|ref|XP_001834148.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea
okayama7#130]
gi|298404507|gb|EAU87644.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea
okayama7#130]
Length = 107
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G LKG+DQ +N++LD+ E V S + ++ LGL ++RG I
Sbjct: 46 GVLKGYDQLLNLVLDEVEEEV-SASNPYKKRSLGLVVLRGPTI 87
>gi|119483034|ref|XP_001261545.1| LSM domain protein [Neosartorya fischeri NRRL 181]
gi|119409700|gb|EAW19648.1| LSM domain protein [Neosartorya fischeri NRRL 181]
Length = 95
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 13 QGTLKGFDQTINIILDDSHE-RVYSPTAGVEQVVLGLHIIRGDNIKI 58
+G ++GFD+ +N+++DD+ E R+ + T ++ LG +++GDN+ +
Sbjct: 44 EGKIRGFDEFMNLVIDDAVEVRMATKTDEEKRRPLGQILLKGDNVSL 90
>gi|392577759|gb|EIW70888.1| hypothetical protein TREMEDRAFT_29158 [Tremella mesenterica DSM
1558]
Length = 85
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
F GTL GFD +N++L D E +P G+ + LG ++ G+NI
Sbjct: 29 FTGTLMGFDDYVNMVLRDVKEYQVTP-GGIIETPLGQTLLNGNNI 72
>gi|156405713|ref|XP_001640876.1| predicted protein [Nematostella vectensis]
gi|156228012|gb|EDO48813.1| predicted protein [Nematostella vectensis]
Length = 77
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +N++LDD+ E V +G E+ +G+ +IRG++I
Sbjct: 29 GVLRGYDPFMNLVLDDAVENV----SGNEKHAIGMVVIRGNSI 67
>gi|336363390|gb|EGN91783.1| hypothetical protein SERLA73DRAFT_148178 [Serpula lacrymans var.
lacrymans S7.3]
Length = 92
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G LKG+DQ +N++LD+ E++ P LGL ++RG I
Sbjct: 32 GILKGYDQLLNLVLDEVEEQINEPEPHSRS--LGLAVLRGPTI 72
>gi|401840391|gb|EJT43229.1| SME1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 85
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 10 IFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQV----VLGLHIIRGDNIKIPTKIS 63
I +G + GFD+ +N+++D++ E + T G E V LG +++GDNI + T I
Sbjct: 28 IRIRGKIVGFDEFMNVVIDEAVEVPVNSTDGKEDVEKGTTLGRVLLKGDNITLITSID 85
>gi|116780179|gb|ABK21578.1| unknown [Picea sitchensis]
gi|116780948|gb|ABK21894.1| unknown [Picea sitchensis]
Length = 80
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
GTL+GFDQ +N++LD + E G E+ +G+ +IRG+++ + + RS
Sbjct: 30 GTLRGFDQFMNLVLDGTVE-----VNGNERNEIGMVVIRGNSVVMIEALEPVNRS 79
>gi|325181229|emb|CCA15643.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 627
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRS 68
+G + GFD+ +NI+LD++ E ++ LG +++GD I + I STR+
Sbjct: 575 EGRIMGFDEYMNIVLDEAEE---VDVKKAKRAPLGRILLKGDTITLMMSIDGSTRA 627
>gi|422294798|gb|EKU22098.1| U6 snRNA-associated Sm-like protein LSm7 [Nannochloropsis
gaditana CCMP526]
Length = 77
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 14 GTLKGFDQTINIILDDSHERVYSP----TAGVEQVVLGLHIIRGDNIKIPTKISSSTRSP 69
G L+GFDQ IN++LD+S E + P E LGL I RG + + + + +
Sbjct: 8 GILRGFDQLINLVLDESKETLRDPLDPYRLTDETRELGLVICRGTQVSLISPVEGTEEIA 67
Query: 70 VPDPQLTDN 78
P Q D
Sbjct: 68 NPFIQAEDE 76
>gi|378730773|gb|EHY57232.1| small nuclear ribonucleoprotein [Exophiala dermatitidis NIH/UT8656]
Length = 138
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LDD E + LGL + RG
Sbjct: 74 GTLKGYDQLMNLVLDDVKETMRDDEGNETTRPLGLVVARG 113
>gi|260949273|ref|XP_002618933.1| hypothetical protein CLUG_00092 [Clavispora lusitaniae ATCC
42720]
gi|238846505|gb|EEQ35969.1| hypothetical protein CLUG_00092 [Clavispora lusitaniae ATCC
42720]
Length = 149
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPT------AGVEQVVLGLHIIRGDNI 56
G L+ FDQ N++L D+ ER+Y P +V G+ ++RG+N+
Sbjct: 38 GILRTFDQFANLVLQDTFERIYLPKLDQNSPVRFAEVPRGVFMVRGENV 86
>gi|400602043|gb|EJP69668.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 83
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+G+D +NI+LDD+ E T G + LG+ +IRG+++
Sbjct: 28 GVLRGYDVFLNIVLDDAFE----ETEGGNKTRLGMVVIRGNSV 66
>gi|402220188|gb|EJU00260.1| U6 snRNA-associated Sm-like protein LSm7 [Dacryopinax sp. DJM-731
SS1]
Length = 120
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G LKGFDQ +N++LDD E + S +Q LGL ++RG I
Sbjct: 59 GVLKGFDQLMNLVLDDVVENLSSEPP--KQRNLGLVVLRGPTI 99
>gi|161527729|ref|YP_001581555.1| like-Sm ribonucleoprotein core [Nitrosopumilus maritimus SCM1]
gi|160339030|gb|ABX12117.1| Like-Sm ribonucleoprotein core [Nitrosopumilus maritimus SCM1]
Length = 78
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+G L GFDQ +N++LD S E P G E LG ++RGDN+
Sbjct: 28 IRGNLLGFDQHMNLLLDSSEE---IPAEG-EAKGLGSIVVRGDNV 68
>gi|388852751|emb|CCF53669.1| probable SMX2-snRNP G protein [Ustilago hordei]
Length = 87
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQV-----VLGLHIIRGDNI 56
QGTL+GFD +N+++DD+ E+V+ P AG V G ++RG+++
Sbjct: 27 IQGTLRGFDMFLNLVVDDAIEQVH-PEAGNPNVWQDGDRCGTVVVRGNSV 75
>gi|255941628|ref|XP_002561583.1| Pc16g12840 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586206|emb|CAP93954.1| Pc16g12840 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 125
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
GTLKG+DQ +N++LD+ E + +GL + RG I + + S P P
Sbjct: 62 GTLKGYDQLMNLVLDEVKETMRDEEGNTTTRSMGLIVARGTLIVLISPADGSEEIPNP 119
>gi|171676173|ref|XP_001903040.1| hypothetical protein [Podospora anserina S mat+]
gi|170936152|emb|CAP60812.1| unnamed protein product [Podospora anserina S mat+]
Length = 153
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+D +N++LD+ E V LGL ++RG
Sbjct: 87 GTLKGYDALMNLVLDEVQEAVRDDEGNETTRSLGLVVVRG 126
>gi|121715718|ref|XP_001275468.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
clavatus NRRL 1]
gi|119403625|gb|EAW14042.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
clavatus NRRL 1]
Length = 177
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L D+ ER+Y+ E + G+ ++RG+N+ + +I VP
Sbjct: 73 GVLRSWDQFANLVLQDTIERIYAGGLYAE-IPRGIFLVRGENVLLLGEIDLDKEDDVP 129
>gi|393218481|gb|EJD03969.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 85
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
F GTL GFD +N++LDD E Y P G + +L ++ G+NI
Sbjct: 29 FTGTLLGFDDFVNMVLDDVTEYQYLP-EGRKVTMLRQTLLNGNNI 72
>gi|449298949|gb|EMC94963.1| hypothetical protein BAUCODRAFT_34961 [Baudoinia compniacensis UAMH
10762]
Length = 198
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
G L+ +DQ N++L D+ ER++ + + GL ++RG+N+ + +I +P+P
Sbjct: 94 GVLRSWDQFGNLVLQDTVERLFVQNVYAD-IDRGLFLVRGENVSLLGEIDLDKDDYIPEP 152
>gi|363753610|ref|XP_003647021.1| hypothetical protein Ecym_5455 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890657|gb|AET40204.1| hypothetical protein Ecym_5455 [Eremothecium cymbalariae
DBVPG#7215]
Length = 93
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 8 SLIFFQGTLKGFDQTINIILDDSHERVYSPTAGVE----QVVLGLHIIRGDNIKIPTKIS 63
S + +G + GFD+ +N+++DD+ E G E V LG +++GDNI T IS
Sbjct: 34 SQMRIKGKISGFDEFMNVVIDDALELPIDEKTGAELPDKAVKLGRILLKGDNI---TLIS 90
Query: 64 SS 65
+S
Sbjct: 91 AS 92
>gi|258563080|ref|XP_002582285.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907792|gb|EEP82193.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 139
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+DQ +N++LDD E + LGL + RG
Sbjct: 75 GTLKGYDQLMNLVLDDVKEIMRDDEGNDSTRSLGLIVARG 114
>gi|118575248|ref|YP_874991.1| small nuclear ribonucleoprotein [Cenarchaeum symbiosum A]
gi|118193769|gb|ABK76687.1| small nuclear ribonucleoprotein [Cenarchaeum symbiosum A]
Length = 78
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKI 58
+G L GFDQ +N++L+ S E P G E LG ++RGDN+ I
Sbjct: 28 IRGNLLGFDQHMNLLLESSEE---IPVEG-ETRTLGTIVVRGDNVVI 70
>gi|327294916|ref|XP_003232153.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326465325|gb|EGD90778.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 147
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
G LKG+DQ +N++LDD E + V LGL + RG
Sbjct: 83 GVLKGYDQLMNLVLDDVKETMRDDNDNVTTRSLGLIVARG 122
>gi|348673388|gb|EGZ13207.1| hypothetical protein PHYSODRAFT_334991 [Phytophthora sojae]
Length = 106
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGV----EQVVLGLHIIRGDNIKIPTKISSSTRSP 69
GTLKG+DQ +N++LDD E + P + +GL + RG ++ + + + + P
Sbjct: 39 GTLKGYDQLVNLVLDDCVEFLRDPNDEYRITDDTRKVGLVVCRGTSVMLVSPVDGTAEIP 98
Query: 70 VP 71
P
Sbjct: 99 NP 100
>gi|320169252|gb|EFW46151.1| LSM1 protein [Capsaspora owczarzaki ATCC 30864]
Length = 137
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDP 73
G L+ FDQ N++L D+ ER+Y A + G+ +IRG+N+ + +I +
Sbjct: 32 GFLRSFDQFANLVLQDTIERIYVGDA-YGDIPRGIFLIRGENVVLLGEIDLQKDAQTTLR 90
Query: 74 QLTDNFILLPQIWGIER 90
QL IL+ Q ER
Sbjct: 91 QLPVEEILVLQREEQER 107
>gi|284174982|ref|ZP_06388951.1| small nuclear riboprotein protein (snRNP-2) [Sulfolobus
solfataricus 98/2]
gi|384434272|ref|YP_005643630.1| Sm ribonucleoprotein-like protein [Sulfolobus solfataricus 98/2]
gi|261602426|gb|ACX92029.1| Like-Sm ribonucleoprotein core [Sulfolobus solfataricus 98/2]
Length = 76
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Query: 12 FQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+G L+ +DQ +N++L DS E + S +G + LG +IRGDN+
Sbjct: 27 VRGMLRSYDQHMNLVLSDSEE-IQSDGSGKK---LGTIVIRGDNV 67
>gi|15897658|ref|NP_342263.1| small nuclear riboprotein (snRNP-2) [Sulfolobus solfataricus P2]
gi|13813927|gb|AAK41053.1| Small nuclear riboprotein protein (snRNP-2) [Sulfolobus
solfataricus P2]
Length = 79
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 4/44 (9%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+G L+ +DQ +N++L DS E + S +G + LG +IRGDN+
Sbjct: 31 RGMLRSYDQHMNLVLSDSEE-IQSDGSGKK---LGTIVIRGDNV 70
>gi|238496495|ref|XP_002379483.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
flavus NRRL3357]
gi|317147143|ref|XP_003189890.1| small nuclear ribonucleoprotein (LSM1) [Aspergillus oryzae RIB40]
gi|220694363|gb|EED50707.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
flavus NRRL3357]
Length = 174
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L D+ ER+Y+ E + G+ ++RG+N+ + +I +P
Sbjct: 70 GVLRSWDQFANLVLQDTIERLYAGNLYAE-ISRGIFLVRGENVLLLGEIDLDKEDDIP 126
>gi|326473412|gb|EGD97421.1| small nuclear ribonucleoprotein [Trichophyton tonsurans CBS 112818]
gi|326481892|gb|EGE05902.1| small nuclear ribonucleoprotein LSM7 [Trichophyton equinum CBS
127.97]
Length = 154
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
G LKG+DQ +N++LDD E + V LGL + RG
Sbjct: 90 GVLKGYDQLMNLVLDDVKETMRDDNDNVTTRSLGLIVARG 129
>gi|124808462|ref|XP_001348319.1| ribonucleoprotein, putative [Plasmodium falciparum 3D7]
gi|23497211|gb|AAN36758.1|AE014818_23 ribonucleoprotein, putative [Plasmodium falciparum 3D7]
Length = 201
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 5 TILSLIFFQGTLKGFDQTINIILDDSHE--RVYSPTAGVEQV--VLGLHIIRGDNI 56
TI +F GT +D+ +NI+L D+ E +V S ++++ V+GL +IRG+NI
Sbjct: 18 TISDTRYFVGTFLSYDRHMNIVLVDAEEFRKVKSQENSLKEIKRVVGLILIRGENI 73
>gi|336463585|gb|EGO51825.1| hypothetical protein NEUTE1DRAFT_53111 [Neurospora tetrasperma FGSC
2508]
Length = 144
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRG 53
GTLKG+D +N++LDD E V LGL + RG
Sbjct: 79 GTLKGYDALMNLVLDDVQEAVRDEEGNETTRPLGLVVARG 118
>gi|343429796|emb|CBQ73368.1| related to LSM1-Sm-like (Lsm) protein [Sporisorium reilianum
SRZ2]
Length = 148
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 14 GTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVP 71
G L+ +DQ N++L D+ ERV+ + G+ ++RG+N+ + +I VP
Sbjct: 38 GVLRSYDQFANLVLQDTVERVFVGNR-YGDIARGVFLVRGENVVLMGEIDLDAEDEVP 94
>gi|229367628|gb|ACQ58794.1| Small nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 76
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
QG L+GFD +N+++DDS E P G +Q +G+ +IRG++I
Sbjct: 28 QGILRGFDPFMNLVVDDSLE--MGP--GGQQNTIGMVVIRGNSI 67
>gi|146418481|ref|XP_001485206.1| hypothetical protein PGUG_02935 [Meyerozyma guilliermondii ATCC
6260]
Length = 84
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISS 64
QG ++GFD+ +NI++DD+ E + +V LG +++GDNI + + + +
Sbjct: 38 QGRIRGFDEFMNIVIDDAVEILKD-----SEVPLGRILLKGDNITLISSVET 84
>gi|66811318|ref|XP_639367.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74854860|sp|Q54RX0.1|RUXG_DICDI RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|60468000|gb|EAL66011.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 85
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 4/44 (9%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
G L+GFD +NI L D+ E V SPT E+ +G+ IIRG++I
Sbjct: 30 HGILRGFDTFMNIALKDTVE-VVSPT---EKYEIGMVIIRGNSI 69
>gi|71041581|pdb|1TH7|A Chain A, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041582|pdb|1TH7|B Chain B, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041583|pdb|1TH7|C Chain C, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041584|pdb|1TH7|D Chain D, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041585|pdb|1TH7|E Chain E, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041586|pdb|1TH7|F Chain F, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041587|pdb|1TH7|G Chain G, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041588|pdb|1TH7|H Chain H, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041589|pdb|1TH7|I Chain I, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041590|pdb|1TH7|J Chain J, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041591|pdb|1TH7|K Chain K, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041592|pdb|1TH7|L Chain L, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041593|pdb|1TH7|M Chain M, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041594|pdb|1TH7|N Chain N, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
Length = 81
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 4/44 (9%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNI 56
+G L+ +DQ +N++L DS E + S +G + LG +IRGDN+
Sbjct: 33 RGMLRSYDQHMNLVLSDS-EEIQSDGSGKK---LGTIVIRGDNV 72
>gi|254581938|ref|XP_002496954.1| ZYRO0D11968p [Zygosaccharomyces rouxii]
gi|238939846|emb|CAR28021.1| ZYRO0D11968p [Zygosaccharomyces rouxii]
Length = 93
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 13 QGTLKGFDQTINIILDDSHERVYSPTAGVEQV----VLGLHIIRGDNIKIPTKISS 64
+G + GFD+ +N++++D+ E P G E + LG +++GDNI + T +
Sbjct: 38 RGKISGFDEFMNVVIEDATEIPVDPQTGKEHLDRGKKLGKILLKGDNITLITSVDQ 93
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.140 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,193,615,315
Number of Sequences: 23463169
Number of extensions: 85471860
Number of successful extensions: 218833
Number of sequences better than 100.0: 577
Number of HSP's better than 100.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 342
Number of HSP's that attempted gapping in prelim test: 218436
Number of HSP's gapped (non-prelim): 581
length of query: 142
length of database: 8,064,228,071
effective HSP length: 106
effective length of query: 36
effective length of database: 9,872,099,453
effective search space: 355395580308
effective search space used: 355395580308
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 71 (32.0 bits)