RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11405
         (76 letters)



>d1wspa1 d.15.1.8 (A:750-832) Axin 1 {Rat (Rattus norvegicus)
          [TaxId: 10116]}
          Length = 83

 Score = 23.9 bits (52), Expect = 1.4
 Identities = 8/37 (21%), Positives = 18/37 (48%)

Query: 33 KMVHPDKRKGLVYVHQSDDSLMHFCWKDRQSGSVVEV 69
          K V  +   G+V+    +D  +   ++++  G V +V
Sbjct: 46 KKVSDEFDCGVVFEEVREDEAILPVFEEKIIGKVEKV 82


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.130    0.423 

Gapped
Lambda     K      H
   0.267   0.0689    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 276,986
Number of extensions: 9293
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 2
Length of query: 76
Length of database: 2,407,596
Length adjustment: 43
Effective length of query: 33
Effective length of database: 1,817,206
Effective search space: 59967798
Effective search space used: 59967798
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.0 bits)