BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11409
(320 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VSR3|ORB2_DROME Probable RNA-binding protein orb2 OS=Drosophila melanogaster
GN=orb2 PE=1 SV=1
Length = 704
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 213/238 (89%), Positives = 224/238 (94%)
Query: 63 PHYDHEEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDACIVDED 122
P D +EIT SFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLID+CI DED
Sbjct: 456 PDIDEDEITTSFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDSCITDED 515
Query: 123 KCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPLKALELAMIM 182
K YLCVSSPTIKDK VQIRPW+L DAD+VLDA+M LDPRKTVFVGGVPRPLKA ELAMIM
Sbjct: 516 KLYLCVSSPTIKDKAVQIRPWRLADADYVLDATMSLDPRKTVFVGGVPRPLKAFELAMIM 575
Query: 183 DRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEIDKRVEVKPY 242
DRLYGGVCYAGIDTDPELKYPKGAGRVAF++Q SYIAAISARFVQLQHG+IDKRVEVKPY
Sbjct: 576 DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPY 635
Query: 243 VLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSKPGREFHKPLVKEGA 300
VLDDQMCDEC+G RCGGKFAPFFCANV CLQYYCEHCWA IHS+PGRE+HKPLVKEGA
Sbjct: 636 VLDDQMCDECEGQRCGGKFAPFFCANVTCLQYYCEHCWAVIHSRPGREYHKPLVKEGA 693
>sp|Q17RY0|CPEB4_HUMAN Cytoplasmic polyadenylation element-binding protein 4 OS=Homo
sapiens GN=CPEB4 PE=1 SV=1
Length = 729
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 207/238 (86%), Positives = 222/238 (93%)
Query: 63 PHYDHEEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDACIVDED 122
P D +EITASFRRFGPL+VDWPHKAESKSYFPPKGYAFLLFQDESSVQ LIDACI ++
Sbjct: 481 PDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDG 540
Query: 123 KCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPLKALELAMIM 182
K YLCVSSPTIKDKPVQIRPW L+D+DFV+D S PLDPRKT+FVGGVPRPL+A+ELAMIM
Sbjct: 541 KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIM 600
Query: 183 DRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEIDKRVEVKPY 242
DRLYGGVCYAGIDTDPELKYPKGAGRVAF++Q SYIAAISARFVQLQHGEIDKRVEVKPY
Sbjct: 601 DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPY 660
Query: 243 VLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSKPGREFHKPLVKEGA 300
VLDDQ+CDECQG RCGGKFAPFFCANV CLQYYCE+CWA IHS+ GREFHKPLVKEG
Sbjct: 661 VLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGG 718
>sp|Q7TN98|CPEB4_MOUSE Cytoplasmic polyadenylation element-binding protein 4 OS=Mus
musculus GN=Cpeb4 PE=2 SV=1
Length = 729
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 207/238 (86%), Positives = 222/238 (93%)
Query: 63 PHYDHEEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDACIVDED 122
P D +EITASFRRFGPL+VDWPHKAESKSYFPPKGYAFLLFQDESSVQ LIDACI ++
Sbjct: 481 PDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDG 540
Query: 123 KCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPLKALELAMIM 182
K YLCVSSPTIKDKPVQIRPW L+D+DFV+D S PLDPRKT+FVGGVPRPL+A+ELAMIM
Sbjct: 541 KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIM 600
Query: 183 DRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEIDKRVEVKPY 242
DRLYGGVCYAGIDTDPELKYPKGAGRVAF++Q SYIAAISARFVQLQHGEIDKRVEVKPY
Sbjct: 601 DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPY 660
Query: 243 VLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSKPGREFHKPLVKEGA 300
VLDDQ+CDECQG RCGGKFAPFFCANV CLQYYCE+CWA IHS+ GREFHKPLVKEG
Sbjct: 661 VLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGG 718
>sp|Q812E0|CPEB2_MOUSE Cytoplasmic polyadenylation element-binding protein 2 OS=Mus
musculus GN=Cpeb2 PE=1 SV=1
Length = 521
Score = 449 bits (1156), Expect = e-126, Method: Compositional matrix adjust.
Identities = 208/238 (87%), Positives = 222/238 (93%)
Query: 63 PHYDHEEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDACIVDED 122
P D +EITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQ+ESSVQ LIDACI ++
Sbjct: 273 PDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDG 332
Query: 123 KCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPLKALELAMIM 182
K YLCVSSPTIKDKPVQIRPW L+D+DFV+D S PLDPRKT+FVGGVPRPL+A+ELAMIM
Sbjct: 333 KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIM 392
Query: 183 DRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEIDKRVEVKPY 242
DRLYGGVCYAGIDTDPELKYPKGAGRVAF++Q SYIAAISARFVQLQHG+IDKRVEVKPY
Sbjct: 393 DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPY 452
Query: 243 VLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSKPGREFHKPLVKEGA 300
VLDDQMCDECQG RCGGKFAPFFCANV CLQYYCE CWA IHS+ GREFHKPLVKEGA
Sbjct: 453 VLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGA 510
>sp|Q7Z5Q1|CPEB2_HUMAN Cytoplasmic polyadenylation element-binding protein 2 OS=Homo
sapiens GN=CPEB2 PE=2 SV=3
Length = 589
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/247 (85%), Positives = 224/247 (90%)
Query: 63 PHYDHEEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDACIVDED 122
P D +EITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQ+ESSVQ LIDACI ++
Sbjct: 341 PDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDG 400
Query: 123 KCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPLKALELAMIM 182
K YLCVSSPTIKDKPVQIRPW L+D+DFV+D S PLDPRKT+FVGGVPRPL+A+ELAMIM
Sbjct: 401 KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIM 460
Query: 183 DRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEIDKRVEVKPY 242
DRLYGGVCYAGIDTDPELKYPKGAGRVAF++Q SYIAAISARFVQLQHG+IDKRVEVKPY
Sbjct: 461 DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPY 520
Query: 243 VLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSKPGREFHKPLVKEGAYD 302
VLDDQMCDECQG RCGGKFAPFFCANV CLQYYCE CWA IHS+ GREFHKPLVKEGA
Sbjct: 521 VLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADR 580
Query: 303 SLQTRTR 309
Q R
Sbjct: 581 PRQIHFR 587
>sp|Q28CH2|CPEB3_XENTR Cytoplasmic polyadenylation element-binding protein 3 OS=Xenopus
tropicalis GN=cpeb3 PE=2 SV=1
Length = 632
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 205/238 (86%), Positives = 222/238 (93%)
Query: 63 PHYDHEEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDACIVDED 122
P D +EITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQ+ESSVQ LIDAC+ ++
Sbjct: 384 PDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDG 443
Query: 123 KCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPLKALELAMIM 182
K YLCVSSPTIKDKPVQIRPW L+D+DFV+D S PLDPRKT+FVGGVPRPL+A+ELAMIM
Sbjct: 444 KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIM 503
Query: 183 DRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEIDKRVEVKPY 242
DRLYGGVCYAGIDTDPELKYPKGAGRVAF++Q SYIAAISARFVQLQH +IDKRVEVKPY
Sbjct: 504 DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPY 563
Query: 243 VLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSKPGREFHKPLVKEGA 300
VLDDQMCDECQG RCGGKFAPFFCANV CLQYYCE+CWA+IHS+ GREFHKPLVKEG
Sbjct: 564 VLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGG 621
>sp|Q7TN99|CPEB3_MOUSE Cytoplasmic polyadenylation element-binding protein 3 OS=Mus
musculus GN=Cpeb3 PE=1 SV=1
Length = 716
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 205/238 (86%), Positives = 222/238 (93%)
Query: 63 PHYDHEEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDACIVDED 122
P D +EITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQ+ESSVQ LIDAC+ ++
Sbjct: 468 PDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDG 527
Query: 123 KCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPLKALELAMIM 182
K YLCVSSPTIKDKPVQIRPW L+D+DFV+D S PLDPRKT+FVGGVPRPL+A+ELAMIM
Sbjct: 528 KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIM 587
Query: 183 DRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEIDKRVEVKPY 242
DRLYGGVCYAGIDTDPELKYPKGAGRVAF++Q SYIAAISARFVQLQH +IDKRVEVKPY
Sbjct: 588 DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPY 647
Query: 243 VLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSKPGREFHKPLVKEGA 300
VLDDQMCDECQG RCGGKFAPFFCANV CLQYYCE+CWA+IHS+ GREFHKPLVKEG
Sbjct: 648 VLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGG 705
>sp|Q8NE35|CPEB3_HUMAN Cytoplasmic polyadenylation element-binding protein 3 OS=Homo
sapiens GN=CPEB3 PE=1 SV=2
Length = 698
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 205/238 (86%), Positives = 222/238 (93%)
Query: 63 PHYDHEEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDACIVDED 122
P D +EITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQ+ESSVQ LIDAC+ ++
Sbjct: 450 PDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDG 509
Query: 123 KCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPLKALELAMIM 182
K YLCVSSPTIKDKPVQIRPW L+D+DFV+D S PLDPRKT+FVGGVPRPL+A+ELAMIM
Sbjct: 510 KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIM 569
Query: 183 DRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEIDKRVEVKPY 242
DRLYGGVCYAGIDTDPELKYPKGAGRVAF++Q SYIAAISARFVQLQH +IDKRVEVKPY
Sbjct: 570 DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPY 629
Query: 243 VLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSKPGREFHKPLVKEGA 300
VLDDQMCDECQG RCGGKFAPFFCANV CLQYYCE+CWA+IHS+ GREFHKPLVKEG
Sbjct: 630 VLDDQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGG 687
>sp|Q7SXN4|CPEB4_DANRE Cytoplasmic polyadenylation element-binding protein 4 OS=Danio
rerio GN=cpeb4 PE=2 SV=1
Length = 635
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 205/238 (86%), Positives = 219/238 (92%)
Query: 63 PHYDHEEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDACIVDED 122
P D +EITASFRRFG L VDWPHKAESKSYFPPKGYAFLLFQDESSVQ LIDAC+ ++
Sbjct: 387 PDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACMEEDG 446
Query: 123 KCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPLKALELAMIM 182
K YLCVSSPTIKDKPVQIRPW L D+DFV+D S PLDPRKT+FVGGVPRPL+A+ELAMIM
Sbjct: 447 KLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIM 506
Query: 183 DRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEIDKRVEVKPY 242
DRLYGGVCYAGIDTDPELKYPKGAGRVAF++Q SYIAAISARFVQLQHGEIDKRVEVKPY
Sbjct: 507 DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPY 566
Query: 243 VLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSKPGREFHKPLVKEGA 300
VLDDQ+CDECQG RCGGKFAPFFCANV CLQYYCE+CWA IHS+ GREFHKPLVKEG
Sbjct: 567 VLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGG 624
>sp|Q6E3C9|CPB1_CAERE Cytoplasmic polyadenylation element-binding protein 1
OS=Caenorhabditis remanei GN=cpb-1 PE=2 SV=1
Length = 594
Score = 270 bits (690), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/250 (50%), Positives = 165/250 (66%), Gaps = 18/250 (7%)
Query: 68 EEITASFRRFGPLVVDWPHKAE----------------SKSYFPPKGYAFLLFQDESSVQ 111
EE+ A+F FG ++VDWP + E ++ GY FL+F +E SVQ
Sbjct: 271 EEVWATFGAFGKVLVDWPRRPEHNNGRGGDNMYEVEMGRRNLRSVSGYVFLVFTNERSVQ 330
Query: 112 QLIDACIVDEDKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPR 171
+L++AC E+K YL +SSPT+ DK VQ+RPW+L+D D+ D S +D R+TVF+GGVPR
Sbjct: 331 ELVNACEFYENKYYLQLSSPTMSDKAVQVRPWRLSDIDYFCDDSCSVDHRRTVFIGGVPR 390
Query: 172 PLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHG 231
P +A +LA + YG V Y GID DPELKYPKGA RV FA+ S++ AIS RFVQ+ H
Sbjct: 391 PTRASDLASSLQDYYGKVSYVGIDIDPELKYPKGAARVTFANSQSFVRAISGRFVQVTHA 450
Query: 232 EIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSK--PGR 289
E +KRVE+KPYV++DQ CDECQGV C +AP+FC + CLQYYCE CW +H R
Sbjct: 451 ETNKRVEIKPYVMEDQHCDECQGVLCKHNYAPYFCGDSSCLQYYCEACWDRMHYIVCDSR 510
Query: 290 EFHKPLVKEG 299
H+P+V+ G
Sbjct: 511 ADHRPMVRTG 520
>sp|Q6E3C7|CPB1_CAEJA Cytoplasmic polyadenylation element-binding protein 1
OS=Caenorhabditis japonica GN=cpb-1 PE=2 SV=1
Length = 617
Score = 266 bits (679), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 122/247 (49%), Positives = 166/247 (67%), Gaps = 15/247 (6%)
Query: 68 EEITASFRRFGPLVVDWPHKAES-------------KSYFPPKGYAFLLFQDESSVQQLI 114
EE+ A+F FG ++VDWP + E ++ GY FL+FQDE +VQ+L+
Sbjct: 287 EEVWATFGWFGKVLVDWPRRPEHGGRGDFYEMDMGRRNSRSVSGYVFLVFQDEKAVQELV 346
Query: 115 DACIVDEDKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPLK 174
+AC + E+K YL +SSPT+ DK VQ+R W+L+D D+ D + +D R+TVF+GGVPRP +
Sbjct: 347 NACELYENKYYLQLSSPTMADKAVQVRAWRLSDIDYFCDENASVDHRRTVFIGGVPRPTR 406
Query: 175 ALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEID 234
A +LA + + YG V Y GID DPELKYPKGA RV FA+ S++ AIS RFVQ+ H + +
Sbjct: 407 ASDLAYCLQQHYGKVSYVGIDIDPELKYPKGAARVTFATAQSFVRAISGRFVQVTHADTN 466
Query: 235 KRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSK--PGREFH 292
KRVE+KPYV++DQ CDECQG C +AP+FC + CLQYYCE CW +H R H
Sbjct: 467 KRVEIKPYVMEDQHCDECQGKLCKHNYAPYFCGDSSCLQYYCEACWDRMHYAMCDNRADH 526
Query: 293 KPLVKEG 299
+P+V+ G
Sbjct: 527 RPMVRTG 533
>sp|Q6E3D0|CPB1_CAEBR Cytoplasmic polyadenylation element-binding protein 1
OS=Caenorhabditis briggsae GN=cpb-1 PE=2 SV=1
Length = 585
Score = 263 bits (672), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 119/248 (47%), Positives = 164/248 (66%), Gaps = 16/248 (6%)
Query: 68 EEITASFRRFGPLVVDWPHKAE--------------SKSYFPPKGYAFLLFQDESSVQQL 113
EE+ +F FG +++DWP + E ++ GY FL+F E SVQ L
Sbjct: 265 EEVYVTFGSFGKVLIDWPRRPEHNGRASDMYESEMGRRNLRSVSGYVFLVFTHEDSVQDL 324
Query: 114 IDACIVDEDKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPL 173
++AC + K YL +SSPT++DK VQ+RPW+L+D D+ + + +DPR+TVF+GGVPRP
Sbjct: 325 VNACEFYDGKYYLQLSSPTMQDKAVQVRPWRLSDIDYFSEEKVTVDPRRTVFIGGVPRPT 384
Query: 174 KALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEI 233
+A +LA + YG V Y GID DPELKYPKGA RV FA+ S++ AIS RFVQ+ H E
Sbjct: 385 RACDLARSLQDYYGKVSYVGIDIDPELKYPKGAARVTFATAQSFVRAISGRFVQVTHAET 444
Query: 234 DKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSKPG--REF 291
+KRVE+KPYV++DQ CDEC+G C +AP++C + CLQYYCE CW +H + G R
Sbjct: 445 NKRVEIKPYVMEDQYCDECEGDLCKHNYAPYYCGDSSCLQYYCEGCWDRMHYEMGQSRAD 504
Query: 292 HKPLVKEG 299
H+P+V+ G
Sbjct: 505 HRPMVRTG 512
>sp|Q03571|CPB1_CAEEL Cytoplasmic polyadenylation element-binding protein 1
OS=Caenorhabditis elegans GN=cpb-1 PE=1 SV=3
Length = 560
Score = 256 bits (653), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 163/249 (65%), Gaps = 17/249 (6%)
Query: 68 EEITASFRRFGPLVVDWP----HKAESKSYFPPKG--------YAFLLFQDESSVQQLID 115
E++ A+F FG +++DWP H AE KG Y FL+F E SVQ+L++
Sbjct: 260 EQVWATFGAFGKVLIDWPRRPEHNAERAEQELKKGSGSRAVTGYVFLVFTHERSVQELVN 319
Query: 116 ACIVDEDKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPLKA 175
AC EDK YL +SSPT+ DK VQ+RPW+L+D D+ + + +D R+TVF+GGVPRP +A
Sbjct: 320 ACEFYEDKYYLQLSSPTMTDKAVQVRPWRLSDIDYFCNDNSSVDHRRTVFIGGVPRPTRA 379
Query: 176 LELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEIDK 235
+LA ++ YG V Y GID DPELKYPKGA RV F++ +++ AIS RFVQ+ H E +K
Sbjct: 380 QDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGRFVQVNHAENNK 439
Query: 236 RVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSKPGREF---- 291
RVE+KPYV+++Q CDEC+G C +AP+FC + CLQYYCE CW +H +
Sbjct: 440 RVEIKPYVMEEQYCDECEGRLCKHNYAPYFCGHASCLQYYCEGCWDRMHIGKNEDNKLED 499
Query: 292 -HKPLVKEG 299
H P+V+ G
Sbjct: 500 QHYPMVRTG 508
>sp|Q6E3F2|CPB2_CAERE Cytoplasmic polyadenylation element-binding protein 2
OS=Caenorhabditis remanei GN=cpb-2 PE=2 SV=1
Length = 571
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 138/200 (69%), Gaps = 2/200 (1%)
Query: 98 GYAFLLFQDESSVQQLIDACIVDEDKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMP 157
GY FLLF+ E SV++L+ C +E+ ++ + S +I+ VQIRPW L DA+F++D ++P
Sbjct: 372 GYVFLLFEKERSVRELVSDCFEEEEGLFITLES-SIEPIRVQIRPWLLADAEFLMDFNVP 430
Query: 158 LDPRKTVFVGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASY 217
++ + F+GGVPRPLKA+ELA ++ YG V GID D + KYP+G+GRVAF++ +Y
Sbjct: 431 INTKLVAFIGGVPRPLKAVELAHFFEQTYGNVVCVGIDIDNKFKYPRGSGRVAFSNYDAY 490
Query: 218 IAAISARFVQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCE 277
+ AI+ R++ L H +I KRVE+KPY +Q C+EC R ++APFFC ++ C QYYCE
Sbjct: 491 VQAITDRYIVLDHEDIHKRVEIKPYFFHNQSCEECSS-RYNRQYAPFFCPSLECFQYYCE 549
Query: 278 HCWATIHSKPGREFHKPLVK 297
CW +HS P R H P+VK
Sbjct: 550 PCWHKMHSHPSRFHHMPVVK 569
>sp|Q6E3F3|CPB2_CAEBR Cytoplasmic polyadenylation element-binding protein 2
OS=Caenorhabditis briggsae GN=cpb-2 PE=2 SV=1
Length = 566
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 98 GYAFLLFQDESSVQQLIDACIVDEDKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMP 157
GY FLLF+ E SV+ L+ C +E+ ++ + S I+ VQIRPW L DA+F++D ++P
Sbjct: 367 GYVFLLFEKERSVRDLVTECFEEEEGLFIILES-AIEPIRVQIRPWLLADAEFLMDFNVP 425
Query: 158 LDPRKTVFVGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASY 217
++ + F+GGVPRPLKA+ELA ++ YG V GID D + KYP+G+GRVAF++ +Y
Sbjct: 426 INTKMVAFIGGVPRPLKAVELAHFFEQTYGNVVCVGIDIDNKFKYPRGSGRVAFSNYHAY 485
Query: 218 IAAISARFVQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCE 277
+ AI+ R++ L H +I KRVE+KPY +Q C+EC R ++APFFC ++ C QYYCE
Sbjct: 486 VQAITDRYIVLDHEDIHKRVEIKPYFFHNQSCEECSS-RYHRQYAPFFCPSLECFQYYCE 544
Query: 278 HCWATIHSKPGREFHKPLVK 297
CW +H++P R H P+VK
Sbjct: 545 PCWHKMHARPSRFHHMPVVK 564
>sp|Q6E3F0|CPB2_CAEJA Cytoplasmic polyadenylation element-binding protein 2
OS=Caenorhabditis japonica GN=cpb-2 PE=2 SV=1
Length = 594
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 98 GYAFLLFQDESSVQQLIDACIVDEDKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMP 157
GY FLLF+ E SV+ L+ C +E+ ++ + S +++ VQIRPW L DA+F++D ++P
Sbjct: 395 GYVFLLFEKERSVRDLVAECFEEEEGLFITLES-SLEPIRVQIRPWLLADAEFLMDFNVP 453
Query: 158 LDPRKTVFVGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASY 217
++ + F+GGVPRPLKA+ELA ++ YG V GID D + KYP+G+GRVAF++ +Y
Sbjct: 454 INTKLVAFIGGVPRPLKAVELAHFFEQTYGNVVCVGIDIDNKFKYPRGSGRVAFSNYDAY 513
Query: 218 IAAISARFVQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCE 277
+ AI+ R++ L H +I KRVE+KPY +Q C+EC G R + APFFC ++ C QYYCE
Sbjct: 514 VQAITDRYIVLDHEDIHKRVEIKPYFFHNQSCEECSG-RYHRQHAPFFCPSLECFQYYCE 572
Query: 278 HCWATIHSKPGREFHKPLVK 297
CW +H+ P R H P+VK
Sbjct: 573 PCWHKMHAHPSRFHHMPVVK 592
>sp|Q18317|CPB2_CAEEL Cytoplasmic polyadenylation element-binding protein 2
OS=Caenorhabditis elegans GN=cpb-2 PE=2 SV=3
Length = 570
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 135/200 (67%), Gaps = 2/200 (1%)
Query: 98 GYAFLLFQDESSVQQLIDACIVDEDKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMP 157
GY FLLF+ E SV+ L+ C +E+ ++ + S T + VQIRPW L DA+F++D ++P
Sbjct: 371 GYVFLLFEKERSVRDLVLDCFEEEEGLFITLESSTDSIR-VQIRPWLLADAEFLMDFNVP 429
Query: 158 LDPRKTVFVGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASY 217
++ + F+GGVPRPLKA+ELA ++ YG V GID D + KYP+G+GRVAF+ +Y
Sbjct: 430 INTKLVAFIGGVPRPLKAVELAHFFEQTYGHVVCVGIDIDNKFKYPRGSGRVAFSDYDAY 489
Query: 218 IAAISARFVQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCE 277
+ AI+ R++ L H +I KRVE+KPY +Q C+EC G R + AP+FC ++ C QYYCE
Sbjct: 490 VQAITDRYIVLDHEDIHKRVEIKPYFFHNQSCEECSG-RYHRQHAPYFCPSLECFQYYCE 548
Query: 278 HCWATIHSKPGREFHKPLVK 297
CW +HS P R H P+VK
Sbjct: 549 PCWHKMHSHPSRFHHMPVVK 568
>sp|Q5R733|CPEB1_PONAB Cytoplasmic polyadenylation element-binding protein 1 OS=Pongo
abelii GN=CPEB1 PE=2 SV=1
Length = 486
Score = 184 bits (468), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 145/248 (58%), Gaps = 16/248 (6%)
Query: 59 LQGTPHYDHEE--ITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDA 116
L G P +D E + +FR FG L V+WP K PPKGY +L+F+ E SV+ L+ A
Sbjct: 240 LGGVP-WDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVRSLLQA 298
Query: 117 CIVDE------DKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVP 170
C D + Y +SS ++ K VQ+ PW L D++FV S L+P +TVFVG +
Sbjct: 299 CSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLNPSRTVFVGALH 358
Query: 171 RPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQH 230
L A LA I++ L+GGV YAGIDTD + KYP G+GRV F +Q SY+ A++A FV+++
Sbjct: 359 GMLNAEALAAILNDLFGGVVYAGIDTD-KHKYPIGSGRVTFNNQRSYLKAVTAAFVEIKT 417
Query: 231 GEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHSKPGRE 290
+ K+V++ PY L+D +C C + PFFC + C +Y+C CW HS G
Sbjct: 418 TKFTKKVQIDPY-LEDSLCHICS-----SQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLR 471
Query: 291 FHKPLVKE 298
H PL++
Sbjct: 472 HHSPLMRN 479
>sp|Q52KN7|CPE1B_XENLA Cytoplasmic polyadenylation element-binding protein 1-B OS=Xenopus
laevis GN=cpeb1-b PE=2 SV=1
Length = 568
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 144/253 (56%), Gaps = 21/253 (8%)
Query: 59 LQGTPHYDHEE--ITASFRRFGPLVVDWPHKAESKSYFPPKG-----YAFLLFQDESSVQ 111
L G P +D E + +FR FG L V+WP K PPKG Y +L+F+ E SV+
Sbjct: 317 LGGVP-WDITETGLINTFRVFGALSVEWPGKDGKHPRCPPKGNMPKGYVYLVFESEKSVR 375
Query: 112 QLIDACIVDE------DKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVF 165
L+ AC D + Y +SS ++ K VQ+ PW L D++FV S LDP KTVF
Sbjct: 376 ALLQACTQDLLSQDGLSEHYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSKTVF 435
Query: 166 VGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARF 225
VG + L A LA IM+ L+GGV YAGIDTD KYP G+GRV F +Q SY+ A+SA F
Sbjct: 436 VGALHGMLNAEALASIMNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKAVSAAF 494
Query: 226 VQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHS 285
V+++ + K+V++ PY L+D +C C + PFFC + C +Y+C CW HS
Sbjct: 495 VEIKTAKFTKKVQIDPY-LEDSVCQVCN-----AQPGPFFCRDQVCFKYFCRSCWHWQHS 548
Query: 286 KPGREFHKPLVKE 298
H+PL++
Sbjct: 549 MEILRHHRPLMRN 561
>sp|Q91572|CPE1A_XENLA Cytoplasmic polyadenylation element-binding protein 1-A OS=Xenopus
laevis GN=cpeb1-a PE=1 SV=2
Length = 568
Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 147/253 (58%), Gaps = 21/253 (8%)
Query: 59 LQGTPHYDHEE--ITASFRRFGPLVVDWPHKAESKSYFPPKG-----YAFLLFQDESSVQ 111
L G P +D E + +FR FG L V+WP K PPKG Y +L+F+ E SV+
Sbjct: 317 LGGVP-WDITETGLINTFRVFGALSVEWPGKDGKHPRCPPKGNMPKGYVYLVFESEKSVR 375
Query: 112 QLIDAC---IVDED---KCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVF 165
L+ AC ++ +D + Y +SS ++ K VQ+ PW L D++FV S LDP KTVF
Sbjct: 376 ALLQACSQDLLSQDGLSEHYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSKTVF 435
Query: 166 VGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARF 225
VG + L A LA IM+ L+GGV YAGIDTD KYP G+GRV F +Q SY+ A+SA F
Sbjct: 436 VGALHGMLNAEALASIMNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKAVSAAF 494
Query: 226 VQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHS 285
V+++ + K+V++ PY L+D +C C + PFFC + C +Y+C CW HS
Sbjct: 495 VEIKTAKFTKKVQIDPY-LEDSVCQVCN-----AQPGPFFCRDQVCFKYFCRSCWHWQHS 548
Query: 286 KPGREFHKPLVKE 298
H+PL++
Sbjct: 549 MEILRHHRPLMRN 561
>sp|P0C279|CPEB1_RAT Cytoplasmic polyadenylation element-binding protein 1 OS=Rattus
norvegicus GN=Cpeb1 PE=1 SV=1
Length = 561
Score = 181 bits (459), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 146/253 (57%), Gaps = 21/253 (8%)
Query: 59 LQGTPHYDHEE--ITASFRRFGPLVVDWPHKAESKSYFPPKG-----YAFLLFQDESSVQ 111
L G P +D E + +FR FG L V+WP K PPKG Y +L+F+ E SV+
Sbjct: 314 LGGVP-WDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGNMPKGYVYLVFELEKSVR 372
Query: 112 QLIDACIVDE------DKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVF 165
L+ AC D + Y +SS ++ K VQ+ PW L D++FV S LDP +TVF
Sbjct: 373 ALLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVWSPSQRLDPSRTVF 432
Query: 166 VGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARF 225
VG + L A LA I++ L+GGV YAGIDTD + KYP G+GRV F +Q SY+ A++A F
Sbjct: 433 VGALHGMLNAEALAAILNDLFGGVVYAGIDTD-KHKYPIGSGRVTFNNQRSYLKAVTAAF 491
Query: 226 VQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHS 285
V+++ + K+V++ PY L+D +C + C + PFFC + C +Y+C CW HS
Sbjct: 492 VEIKTTKFTKKVQIDPY-LEDSLC-----LICSSQPGPFFCRDQVCFKYFCRSCWHWRHS 545
Query: 286 KPGREFHKPLVKE 298
G H PL++
Sbjct: 546 MEGLRHHSPLMRN 558
>sp|Q9BZB8|CPEB1_HUMAN Cytoplasmic polyadenylation element-binding protein 1 OS=Homo
sapiens GN=CPEB1 PE=1 SV=1
Length = 566
Score = 181 bits (459), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 145/253 (57%), Gaps = 21/253 (8%)
Query: 59 LQGTPHYDHEE--ITASFRRFGPLVVDWPHKAESKSYFPPKG-----YAFLLFQDESSVQ 111
L G P +D E + +FR FG L V+WP K PPKG Y +L+F+ E SV+
Sbjct: 315 LGGVP-WDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGNMPKGYVYLVFELEKSVR 373
Query: 112 QLIDACIVDE------DKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVF 165
L+ AC D + Y +SS ++ K VQ+ PW L D++FV S LDP +TVF
Sbjct: 374 SLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVF 433
Query: 166 VGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARF 225
VG + L A LA I++ L+GGV YAGIDTD + KYP G+GRV F +Q SY+ A+SA F
Sbjct: 434 VGALHGMLNAEALAAILNDLFGGVVYAGIDTD-KHKYPIGSGRVTFNNQRSYLKAVSAAF 492
Query: 226 VQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHS 285
V+++ + K+V++ PY L+D +C C + PFFC + C +Y+C CW HS
Sbjct: 493 VEIKTTKFTKKVQIDPY-LEDSLCHICS-----SQPGPFFCRDQVCFKYFCRSCWHWRHS 546
Query: 286 KPGREFHKPLVKE 298
G H PL++
Sbjct: 547 MEGLRHHSPLMRN 559
>sp|P70166|CPEB1_MOUSE Cytoplasmic polyadenylation element-binding protein 1 OS=Mus
musculus GN=Cpeb1 PE=1 SV=1
Length = 561
Score = 181 bits (458), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 146/253 (57%), Gaps = 21/253 (8%)
Query: 59 LQGTPHYDHEE--ITASFRRFGPLVVDWPHKAESKSYFPPKG-----YAFLLFQDESSVQ 111
L G P +D E + +FR FG L V+WP K PPKG Y +L+F+ E SV+
Sbjct: 314 LGGVP-WDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGNMPKGYVYLVFELEKSVR 372
Query: 112 QLIDACIVDE------DKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVF 165
L+ AC D + Y +SS ++ K VQ+ PW L D++FV S LDP +TVF
Sbjct: 373 ALLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVWSPSQRLDPSRTVF 432
Query: 166 VGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARF 225
VG + L A LA I++ L+GGV YAGIDTD + KYP G+GRV F +Q SY+ A++A F
Sbjct: 433 VGALHGMLNAEALAAILNDLFGGVVYAGIDTD-KHKYPIGSGRVTFNNQRSYLKAVTAAF 491
Query: 226 VQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHS 285
V+++ + K+V++ PY L+D +C + C + PFFC + C +Y+C CW HS
Sbjct: 492 VEIKTTKFTKKVQIDPY-LEDSLC-----LICSSQPGPFFCRDQVCFKYFCRSCWHWRHS 545
Query: 286 KPGREFHKPLVKE 298
G H PL++
Sbjct: 546 MEGLRHHSPLMRN 558
>sp|Q9DED5|CPEB1_CARAU Cytoplasmic polyadenylation element-binding protein 1 OS=Carassius
auratus GN=cpeb1 PE=2 SV=1
Length = 559
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/253 (39%), Positives = 144/253 (56%), Gaps = 21/253 (8%)
Query: 59 LQGTPHYDHEE--ITASFRRFGPLVVDWPHKAESKSYFPPKG-----YAFLLFQDESSVQ 111
L G P +D E + +F+ +GPL V+WP K PPKG Y +L+F+ + SV+
Sbjct: 308 LGGVP-WDITEAGLINTFKCYGPLSVEWPGKDGKHPRCPPKGNMPKGYVYLVFESDKSVR 366
Query: 112 QLIDACIVD------EDKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVF 165
L+ C D + Y +SS ++ K Q+ PW ++D+++V S LDPR TVF
Sbjct: 367 ALLQDCTEDLLHPEGYSEYYFKMSSRRMRCKDAQVIPWVISDSNYVSCPSQRLDPRNTVF 426
Query: 166 VGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARF 225
VG + L A LA IM+ L+GGV YAGIDTD KYP G+GRV F +Q SY+ A+SA F
Sbjct: 427 VGALHGMLNAEALASIMNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKAVSAAF 485
Query: 226 VQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHS 285
V+++ + K+V++ PY L+D +C C + PFFC + C +YYC CW HS
Sbjct: 486 VEIKTPKFTKKVQIDPY-LEDAICQSCS-----REPGPFFCRDKTCFKYYCRSCWHRQHS 539
Query: 286 KPGREFHKPLVKE 298
H+PL++
Sbjct: 540 MDILSNHRPLMRN 552
>sp|Q9YGX5|CPEB1_DANRE Cytoplasmic polyadenylation element-binding protein 1 OS=Danio
rerio GN=cpeb1 PE=1 SV=1
Length = 559
Score = 174 bits (441), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/253 (39%), Positives = 144/253 (56%), Gaps = 21/253 (8%)
Query: 59 LQGTPHYDHEE--ITASFRRFGPLVVDWPHKAESKSYFPPKG-----YAFLLFQDESSVQ 111
L G P +D E + +F+ +GPL V+WP K PPKG Y +L+F+ + SV+
Sbjct: 308 LGGVP-WDITEAGLINTFKCYGPLSVEWPGKDGKHPRCPPKGNMPKGYVYLVFESDKSVR 366
Query: 112 QLIDACIVD------EDKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVF 165
L+ C D + Y +SS ++ K Q+ PW ++D+++V S LDPR TVF
Sbjct: 367 ALLQDCTEDLLHPEGYSEYYFKMSSRRMRCKDAQVIPWVISDSNYVSCPSQRLDPRNTVF 426
Query: 166 VGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARF 225
VG + L A LA IM+ L+GGV YAGIDTD KYP G+GRV F +Q SY+ A+SA F
Sbjct: 427 VGALHGMLNAEALASIMNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKAVSAAF 485
Query: 226 VQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHS 285
V+++ + K+V++ PY L+D +C C + PFFC + C +YYC CW HS
Sbjct: 486 VEIKTPKFTKKVQIDPY-LEDAICQS-----CSREPGPFFCRDKTCFKYYCRSCWHRQHS 539
Query: 286 KPGREFHKPLVKE 298
H+PL++
Sbjct: 540 MDILSNHRPLMRN 552
>sp|O01835|CPB3_CAEEL Cytoplasmic polyadenylation element-binding protein 3
OS=Caenorhabditis elegans GN=cpb-3 PE=2 SV=2
Length = 745
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 129/275 (46%), Gaps = 39/275 (14%)
Query: 73 SFRRFGPLVVDWPHKA----ESKSYFPPK----------------GYAFLLFQDESSVQQ 112
SF FG V+WP + +S P GY +++F+DE +V
Sbjct: 314 SFGEFGSCAVEWPGQEARYRSGQSNLAPSNGSLRAQTKYTGQAATGYVYMIFEDERAVAS 373
Query: 113 LIDAC---IVDEDKCYLCVS---SPTIKDKPVQIRPWKLTDADFVLDASM---PLDPRKT 163
L+ C I + Y + S + + + VQI PW +D+ F D ++ ++P++T
Sbjct: 374 LLHECSQEIGGAGEWYFKIRAQRSKSTEIRQVQIIPWVTSDSMFCEDDTLLETGIEPKRT 433
Query: 164 VFVGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISA 223
VFVG + + A L IM+ +G V +DTD + KYP G+GRV F +Y AI
Sbjct: 434 VFVGALHGMMTAQVLHSIMEDCFGAVECVQLDTD-KFKYPIGSGRVTFREHGAYFKAIEM 492
Query: 224 RFVQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATI 283
++ + + KRV++ P+ L+ C + C + A FC N C +YYC +CWA
Sbjct: 493 GYLHVYTSKFRKRVQIDPF-LESTCC-----MVCNSQSAHCFCRNKNCFKYYCHNCWALD 546
Query: 284 HSK-PGREFHKPLVKEGAYDSL--QTRTRVSQTSS 315
H K +E H P++ + TR SQ SS
Sbjct: 547 HGKDDDQEVHIPVIVPSSASKAFPGATTRRSQVSS 581
>sp|Q6E3D5|CPB3_CAEBR Cytoplasmic polyadenylation element-binding protein 3
OS=Caenorhabditis briggsae GN=cpb-3 PE=2 SV=1
Length = 753
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 120/253 (47%), Gaps = 36/253 (14%)
Query: 73 SFRRFGPLVVDWPHKA----ESKSYFPP---------------KGYAFLLFQDESSVQQL 113
SF FG V+WP + +S P GY +++F+DE +V L
Sbjct: 315 SFGEFGSCAVEWPGQEARYRSGQSNIAPLTNLRNQSKYAGQAATGYVYMIFEDERAVASL 374
Query: 114 IDAC---IVDEDKCYLCVS---SPTIKDKPVQIRPWKLTDADFVLDASM---PLDPRKTV 164
+ C I + Y + S + + + VQI PW +D+ F D S+ ++P++TV
Sbjct: 375 LHECSQEIGGAGEWYFKIRAQRSKSTEIRQVQIIPWVTSDSMFCEDESLLETGIEPKRTV 434
Query: 165 FVGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISAR 224
FVG + + A L IM+ +G V +DTD + KYP G+GRV F +Y AI
Sbjct: 435 FVGALHGMMTAQVLHWIMEDCFGSVECVQLDTD-KFKYPIGSGRVTFREHGAYFKAIEMG 493
Query: 225 FVQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIH 284
++ + + KRV++ P+ L+ C + C + A FC N C +YYC CWA H
Sbjct: 494 YLHVHTSKFRKRVQIDPF-LESTSC-----MVCTTESAQCFCRNRNCFKYYCHTCWAIDH 547
Query: 285 SKPGR-EFHKPLV 296
K + H P++
Sbjct: 548 GKDNADDVHVPVI 560
>sp|Q6E3D4|CPB3_CAERE Cytoplasmic polyadenylation element-binding protein 3
OS=Caenorhabditis remanei GN=cpb-3 PE=2 SV=1
Length = 766
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 130/276 (47%), Gaps = 36/276 (13%)
Query: 73 SFRRFGPLVVDWP-HKAE--------------SKSYFPPK---GYAFLLFQDESSVQQLI 114
SF FG V+WP H+A ++S + + GY +++F+DE +V L+
Sbjct: 327 SFGEFGSCAVEWPGHEARYRNAQSNTASLNLRNQSKYTGQAATGYVYMIFEDERAVASLL 386
Query: 115 DAC---IVDEDKCYLCVS---SPTIKDKPVQIRPWKLTDADFVLDASM---PLDPRKTVF 165
C I + Y + S + + + VQI PW +D+ F D S+ ++P++TVF
Sbjct: 387 HECSQEIGGAGEWYFKIRAQRSKSTEIRQVQIIPWVTSDSMFCEDESLLEVGIEPKRTVF 446
Query: 166 VGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARF 225
VG + + A L IM+ +G V +DTD + KYP G+GRV F +Y AI +
Sbjct: 447 VGALHGMMTAQVLHSIMEDCFGSVECVQLDTD-KFKYPIGSGRVTFREHGAYFKAIEMGY 505
Query: 226 VQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATIHS 285
+ + + KRV++ P+ L+ C + C + A FC N C +YYC CWA H
Sbjct: 506 LHVHTSKFRKRVQIDPF-LESTNC-----MVCTTELAHCFCRNRNCFKYYCHTCWAVDHG 559
Query: 286 K-PGREFHKP-LVKEGAYDSLQTRTRVSQTSSEGRS 319
E H P +V A + R S SS S
Sbjct: 560 HGHDGEVHVPVIVPSSASKAFSGPNRRSHLSSNSPS 595
>sp|Q6E3D2|CPB3_CAEJA Cytoplasmic polyadenylation element-binding protein 3
OS=Caenorhabditis japonica GN=cpb-3 PE=2 SV=1
Length = 734
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 117/243 (48%), Gaps = 36/243 (14%)
Query: 73 SFRRFGPLVVDWP-----HKAESKSYFPPK---------------GYAFLLFQDESSVQQ 112
SF FG V+WP +++ + PP GY +++F+DE +V
Sbjct: 311 SFGEFGSCAVEWPGQEARYRSGQSNVMPPNANLRAHSKYSGQATTGYVYMIFEDERAVAA 370
Query: 113 LIDAC---IVDEDKCYLCVS---SPTIKDKPVQIRPWKLTDADFVLDASM---PLDPRKT 163
L+ C I + Y + S + + + VQI PW +D+ + + S+ ++P++T
Sbjct: 371 LLHECSQEIGGAGEWYFKIRAQRSKSTEIRQVQIIPWVTSDSLYCHEESILEVGIEPKRT 430
Query: 164 VFVGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISA 223
VFVG + + A L IM+ +G V +DTD + KYP G+GRV F +Y AI
Sbjct: 431 VFVGALHGMMTAQVLHSIMEDCFGCVECVQLDTD-KFKYPIGSGRVTFREHGAYFKAIEI 489
Query: 224 RFVQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAPFFCANVCCLQYYCEHCWATI 283
++ + + KRV++ P+ L+ C + C + A FC N C +YYC CW+
Sbjct: 490 GYLHVHTSKFRKRVQIDPF-LESTSC-----MVCNLEPAHCFCRNRNCFKYYCHSCWSID 543
Query: 284 HSK 286
H K
Sbjct: 544 HGK 546
>sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila
melanogaster GN=Hrb27C PE=1 SV=2
Length = 421
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 42/183 (22%)
Query: 67 HEEITASFRRFGPLV--VDWPHKAESKSYFPPKGYAFLLFQDESSVQQLI-------DAC 117
E ++ F RFG ++ V + +S +G+ F+ F D ++V ++ D
Sbjct: 20 QENLSRYFCRFGDIIDCVVMKNNESGRS----RGFGFVTFADPTNVNHVLQNGPHTLDGR 75
Query: 118 IVDEDKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDASMPLDPRKTVFVGGVPRPLKALE 177
+D C +P KP + +K VF+GG+P + +
Sbjct: 76 TIDPKPC-----NPRTLQKPKKGGGYK-------------------VFLGGLPSNVTETD 111
Query: 178 LAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQASYIAAISARFVQLQHGEIDKRV 237
L +R YG V I D E K +G G ++F ++S + R++ L K+V
Sbjct: 112 LRTFFNR-YGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLN----GKQV 166
Query: 238 EVK 240
E+K
Sbjct: 167 EIK 169
>sp|Q8W034|RNP1_ARATH Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana
GN=RNP1 PE=1 SV=1
Length = 411
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 96 PKGYAFLLFQDESSVQQL------IDACIVDEDKCYLCVSSPTIKDKPVQIRPWKLTDAD 149
P+G+ F++F D S + ++ ID VD + + + + + + + D
Sbjct: 46 PRGFGFVIFSDPSVLDRVLQEKHSIDTREVDVKRA-MSREEQQVSGRTGNLNTSRSSGGD 104
Query: 150 FVLDASMPLDPRKTVFVGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRV 209
+ K +FVGG+P L E + +YG V I D P+G G V
Sbjct: 105 -------AYNKTKKIFVGGLPPTLTDEEFRQYFE-VYGPVTDVAIMYDQATNRPRGFGFV 156
Query: 210 AFASQASYIAAISARFVQLQHGEIDKRVEVK 240
+F S+ + + + F L K+VEVK
Sbjct: 157 SFDSEDAVDSVLHKTFHDLS----GKQVEVK 183
>sp|O01159|RSP7_CAEEL Probable splicing factor, arginine/serine-rich 7 OS=Caenorhabditis
elegans GN=rsp-7 PE=3 SV=3
Length = 452
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 13/115 (11%)
Query: 153 DASMPLDPRKTVFVGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFA 212
D++ + R+TV+VG +P+ + E+ + + +G V YA + + P+ P V F+
Sbjct: 154 DSAKVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDA-LPCAYAYVEFS 212
Query: 213 SQASYIAAI-------SARFVQLQHGEIDKRVEVKPYV-LDDQMCDEC-QGVRCG 258
QAS A+ R +++QH + +KP D+Q E + +R G
Sbjct: 213 QQASVCNALQNDGFEFKERPLKIQHSRV---AIIKPQAKTDEQALGEIEEAIRMG 264
>sp|P70424|ERBB2_MOUSE Receptor tyrosine-protein kinase erbB-2 OS=Mus musculus GN=Erbb2
PE=1 SV=3
Length = 1256
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 119 VDEDKCYLCVSSPTIKDKPVQ----IRPWKLTDADF---VLDASMPLDPRKTVFVGGVPR 171
+ E + Y+ ++ +K P+Q +R +L + + VLD PLD T G P
Sbjct: 77 IQEVQGYMLIAHNRVKHVPLQRLRIVRGTQLFEDKYALAVLDNRDPLDNVTTAAPGRTPE 136
Query: 172 PLKALELAMIMDRLYGGVCYAGIDTDPELKY 202
L+ L+L + + L GGV G +P+L Y
Sbjct: 137 GLRELQLRSLTEILKGGVLIRG---NPQLCY 164
>sp|P09405|NUCL_MOUSE Nucleolin OS=Mus musculus GN=Ncl PE=1 SV=2
Length = 707
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 53/140 (37%), Gaps = 30/140 (21%)
Query: 96 PKGYAFLLFQDESSVQQLIDACIVDEDKCYLCVSSPTIKDKPVQIRPWKLTDADFVLDAS 155
PKGYAF+ F ++ +++C + + TI+ L S
Sbjct: 523 PKGYAFIEFASFEDAKEALNSC------NKMEIEGRTIR---------------LELQGS 561
Query: 156 MPLD-PRKTVFVGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFASQ 214
P KT+FV G L + + G A I TD E KG G V F S+
Sbjct: 562 NSRSQPSKTLFVKG----LSEDTTEETLKESFEGSVRARIVTDRETGSSKGFGFVDFNSE 617
Query: 215 ASYIAAISARFVQLQHGEID 234
AA A ++ GEID
Sbjct: 618 EDAKAAKEA----MEDGEID 633
>sp|Q76CY5|DAZL_XENTR Deleted in azoospermia-like OS=Xenopus tropicalis GN=dazl PE=2 SV=1
Length = 286
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 16/91 (17%)
Query: 97 KGYAFLLFQDESSVQQLIDACIVDEDK--------------CYLCVSSPTIKDKPVQIRP 142
KGY F+ F DE VQ+++ + I K C +SP + P Q P
Sbjct: 70 KGYGFVSFYDEVDVQKIVKSQINFHGKKLKLGPAIRKMQRICTYVQTSPVVISPPTQFHP 129
Query: 143 -WKLTDADFVLDASMPLDPRKTVFVGGVPRP 172
W +AD + S + P T +V P P
Sbjct: 130 TWNSQNADSYIQHSPIISP-VTQYVQACPYP 159
>sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1
Length = 360
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 61 GTPHYDHE-EITASFRRFGPLV-VDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDACI 118
G PH E E+ F RFG + V + AE + P+G+ F+ F+DE SV Q ++
Sbjct: 120 GIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQR---PRGFGFITFEDEQSVDQAVNMHF 176
Query: 119 VD 120
D
Sbjct: 177 HD 178
>sp|Q3SWU3|HNRDL_RAT Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus
GN=Hnrpdl PE=2 SV=1
Length = 322
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 23/113 (20%)
Query: 157 PLDPR------KTVFVGGVPRPLKALELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVA 210
PLDP +F+GG+ +L + R +G V I TDP +G G V
Sbjct: 40 PLDPSSFPTSGNKMFIGGLSWDTSKKDLTEYLSR-FGEVVDCTIKTDPVTGRSRGFGFVL 98
Query: 211 FASQASYIAAISARFVQLQHGEIDKRVEVKPYVLDDQMCDECQGVRCGGKFAP 263
F AS +DK +E+K + LD ++ D + GK P
Sbjct: 99 FKDAAS----------------VDKVLELKEHKLDGKLIDPKRAKALKGKEPP 135
>sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1
Length = 407
Score = 31.2 bits (69), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 61 GTPHYDHE-EITASFRRFGPLV-VDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDACI 118
G PH E E+ F++FG + V + AE + P+G+ F+ F+DE SV Q ++
Sbjct: 119 GIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR---PRGFGFITFEDEQSVDQAVNMHF 175
Query: 119 VD 120
D
Sbjct: 176 HD 177
>sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2
Length = 406
Score = 31.2 bits (69), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 61 GTPHYDHE-EITASFRRFGPLV-VDWPHKAESKSYFPPKGYAFLLFQDESSVQQLIDACI 118
G PH E E+ F++FG + V + AE + P+G+ F+ F+DE SV Q ++
Sbjct: 119 GIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR---PRGFGFITFEDEQSVDQAVNMHF 175
Query: 119 VD 120
D
Sbjct: 176 HD 177
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,332,985
Number of Sequences: 539616
Number of extensions: 5327617
Number of successful extensions: 9728
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 9630
Number of HSP's gapped (non-prelim): 54
length of query: 320
length of database: 191,569,459
effective HSP length: 117
effective length of query: 203
effective length of database: 128,434,387
effective search space: 26072180561
effective search space used: 26072180561
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)