Diaphorina citri psyllid: psy1140

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
MTTFTILSLIFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDPQLTDNFILLPQIWGIERRTLSFMRFGYRPSVDVLHLSASALKVESMAFIMGLTLPCVLSHDLFLPPWNS
cEEEEEEEcEEEEEEEEEccccccEEEEccEEEEEEccccEEEEEEEEEEEEcccEEEEEccccccccccccccccHHHHHcccHHHHHHHHHHHHHcccccccHHHHccHHHHHHHHHHHHHcccccEEECcccccccccc
*TTFTILSLIFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDPQLTDNFILLPQIWGIERRTLSFMRFGYRPSVDVLHLSASALKVESMAFIMGLTLPCVLSHDLFLPPW**
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MTTFTILSLIFFQGTLKGFDQTINIILDDSHERVYSPTAGVEQVVLGLHIIRGDNIKIPTKISSSTRSPVPDPQLTDNFILLPQIWGIERRTLSFMRFGYRPSVDVLHLSASALKVESMAFIMGLTLPCVLSHDLFLPPWNS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
N-alpha-acetyltransferase 38, NatC auxiliary subunit Binds specifically to the 3'-terminal U-tract of U6 snRNA.confidentO95777
N-alpha-acetyltransferase 38, NatC auxiliary subunit Binds specifically to the 3'-terminal U-tract of U6 snRNA.confidentQ3ZCE0
N-alpha-acetyltransferase 38, NatC auxiliary subunit Binds specifically to the 3'-terminal U-tract of U6 snRNA.confidentQ6ZWM4

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0071011 [CC]precatalytic spliceosomeprobableGO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4EMK, chain C
Confidence level:very confident
Coverage over the Query: 3-61
View the alignment between query and template
View the model in PyMOL