Query psy11412
Match_columns 290
No_of_seqs 166 out of 1367
Neff 7.4
Searched_HMMs 46136
Date Fri Aug 16 17:46:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11412.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11412hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2706 3-carboxymuconate cycl 100.0 3.3E-27 7.2E-32 215.6 22.5 200 30-277 85-311 (346)
2 PF10282 Lactonase: Lactonase, 99.9 4.2E-26 9.2E-31 214.4 23.0 168 31-276 142-311 (345)
3 KOG0918|consensus 99.9 2.3E-23 4.9E-28 192.4 15.5 125 166-290 297-422 (476)
4 PF05694 SBP56: 56kDa selenium 99.9 7.1E-24 1.5E-28 199.7 10.7 177 54-290 221-407 (461)
5 PRK11028 6-phosphogluconolacto 99.9 3.4E-21 7.4E-26 179.0 21.4 167 33-276 126-293 (330)
6 PF10282 Lactonase: Lactonase, 99.8 6.8E-19 1.5E-23 165.5 22.4 179 31-277 85-265 (345)
7 PF05694 SBP56: 56kDa selenium 99.8 1.5E-20 3.3E-25 177.3 9.1 139 1-155 274-419 (461)
8 KOG0918|consensus 99.8 3.5E-19 7.5E-24 164.8 12.5 155 1-156 281-435 (476)
9 PRK11028 6-phosphogluconolacto 99.8 7.1E-18 1.5E-22 156.7 19.5 158 31-276 33-194 (330)
10 TIGR02658 TTQ_MADH_Hv methylam 99.7 2.3E-15 5E-20 141.4 20.7 204 11-277 78-320 (352)
11 COG2706 3-carboxymuconate cycl 99.7 1.6E-14 3.5E-19 132.6 21.9 205 14-278 22-265 (346)
12 PF02239 Cytochrom_D1: Cytochr 99.6 8.8E-15 1.9E-19 139.0 18.2 173 11-275 17-190 (369)
13 TIGR02658 TTQ_MADH_Hv methylam 99.6 5.5E-14 1.2E-18 132.2 19.8 89 10-129 27-124 (352)
14 PF02239 Cytochrom_D1: Cytochr 99.5 1.6E-13 3.5E-18 130.4 15.2 217 12-275 60-334 (369)
15 TIGR03866 PQQ_ABC_repeats PQQ- 99.5 1.7E-12 3.8E-17 116.3 20.8 180 11-283 96-278 (300)
16 TIGR03866 PQQ_ABC_repeats PQQ- 99.5 3.1E-12 6.7E-17 114.7 19.3 165 11-276 12-176 (300)
17 PRK02888 nitrous-oxide reducta 99.5 6.5E-13 1.4E-17 131.3 14.9 212 10-279 215-454 (635)
18 PRK02888 nitrous-oxide reducta 99.4 8.1E-12 1.8E-16 123.6 18.3 191 7-275 160-392 (635)
19 COG3391 Uncharacterized conser 99.4 4E-11 8.6E-16 114.5 19.2 175 8-277 94-273 (381)
20 COG3391 Uncharacterized conser 99.3 1.3E-10 2.7E-15 111.1 17.2 156 30-276 70-226 (381)
21 KOG0315|consensus 99.2 2.4E-09 5.2E-14 94.7 19.4 209 7-282 58-286 (311)
22 PF08450 SGL: SMP-30/Gluconola 99.2 2.6E-09 5.7E-14 95.3 18.0 149 34-276 87-245 (246)
23 KOG0315|consensus 99.0 5.4E-09 1.2E-13 92.5 13.6 147 33-276 41-187 (311)
24 KOG2096|consensus 99.0 1.1E-08 2.4E-13 93.3 14.3 223 34-289 88-368 (420)
25 PLN02919 haloacid dehalogenase 99.0 1.7E-08 3.6E-13 107.7 17.8 194 33-276 683-877 (1057)
26 KOG0266|consensus 98.9 3.5E-08 7.6E-13 96.4 16.3 156 34-283 205-363 (456)
27 KOG0639|consensus 98.9 1.8E-08 4E-13 96.4 12.6 158 32-282 419-579 (705)
28 PLN02919 haloacid dehalogenase 98.9 8.1E-08 1.7E-12 102.5 18.2 189 33-276 568-759 (1057)
29 PTZ00421 coronin; Provisional 98.9 4.2E-07 9.1E-12 89.7 21.0 175 34-275 77-278 (493)
30 KOG0291|consensus 98.8 2.1E-07 4.6E-12 92.7 17.6 162 34-276 352-540 (893)
31 PF07433 DUF1513: Protein of u 98.8 1.8E-07 3.9E-12 86.1 15.1 65 184-281 55-123 (305)
32 KOG1446|consensus 98.8 3.7E-07 8E-12 83.0 16.2 156 34-283 102-261 (311)
33 KOG0266|consensus 98.8 2E-07 4.4E-12 91.1 15.8 155 34-283 161-317 (456)
34 cd00200 WD40 WD40 domain, foun 98.8 9.8E-07 2.1E-11 76.3 18.0 146 33-276 136-281 (289)
35 KOG1407|consensus 98.8 2.3E-07 4.9E-12 82.8 13.9 113 34-211 108-220 (313)
36 PF08662 eIF2A: Eukaryotic tra 98.7 8.7E-07 1.9E-11 77.0 16.5 59 182-276 103-163 (194)
37 KOG0318|consensus 98.7 4.1E-07 8.8E-12 87.6 15.1 184 34-283 60-264 (603)
38 PRK02889 tolB translocation pr 98.7 1.5E-06 3.2E-11 84.2 18.7 31 34-64 197-229 (427)
39 cd00200 WD40 WD40 domain, foun 98.7 3.2E-06 6.8E-11 73.0 19.0 144 35-276 54-197 (289)
40 PRK03629 tolB translocation pr 98.7 1.4E-06 3E-11 84.6 18.2 34 31-64 241-276 (429)
41 KOG1539|consensus 98.7 6E-07 1.3E-11 90.3 15.3 146 31-276 492-637 (910)
42 PF08450 SGL: SMP-30/Gluconola 98.7 1.3E-06 2.8E-11 77.9 16.3 125 35-212 42-166 (246)
43 PRK02889 tolB translocation pr 98.7 1E-06 2.2E-11 85.3 16.7 49 12-63 222-270 (427)
44 PF07433 DUF1513: Protein of u 98.7 1.6E-06 3.5E-11 79.9 16.7 200 7-276 27-236 (305)
45 PRK05137 tolB translocation pr 98.7 1.3E-06 2.8E-11 84.7 17.1 50 12-64 228-279 (435)
46 PTZ00420 coronin; Provisional 98.6 2.2E-06 4.7E-11 85.8 18.9 118 33-211 75-198 (568)
47 PRK01742 tolB translocation pr 98.6 8.7E-07 1.9E-11 85.8 15.8 175 34-276 205-391 (429)
48 PRK05137 tolB translocation pr 98.6 3.6E-06 7.8E-11 81.6 18.8 31 34-64 203-235 (435)
49 KOG0272|consensus 98.6 2.4E-07 5.2E-12 87.1 9.9 113 34-210 263-375 (459)
50 PRK04922 tolB translocation pr 98.6 2.4E-06 5.2E-11 82.8 17.2 27 184-210 340-368 (433)
51 KOG2055|consensus 98.6 6.9E-07 1.5E-11 84.9 12.8 169 18-276 333-502 (514)
52 PRK03629 tolB translocation pr 98.6 4.2E-06 9.1E-11 81.2 18.7 31 34-64 200-232 (429)
53 PRK04792 tolB translocation pr 98.6 2.1E-06 4.5E-11 83.8 16.3 50 12-64 244-295 (448)
54 KOG0263|consensus 98.6 6.7E-07 1.4E-11 89.3 12.4 151 34-282 453-605 (707)
55 KOG0272|consensus 98.6 1.3E-06 2.9E-11 82.1 13.7 175 35-282 178-373 (459)
56 KOG0291|consensus 98.6 4E-06 8.6E-11 83.9 17.5 190 34-276 480-700 (893)
57 KOG0282|consensus 98.6 1.1E-06 2.3E-11 83.9 13.0 179 34-276 260-452 (503)
58 PRK00178 tolB translocation pr 98.5 4E-06 8.6E-11 80.9 17.2 49 13-64 226-276 (430)
59 KOG0263|consensus 98.5 5.2E-07 1.1E-11 90.1 11.0 151 35-283 496-648 (707)
60 PRK01742 tolB translocation pr 98.5 1.7E-06 3.8E-11 83.7 14.6 31 32-62 247-277 (429)
61 KOG0318|consensus 98.5 1.4E-05 3E-10 77.3 20.1 196 9-276 288-507 (603)
62 PRK04792 tolB translocation pr 98.5 6.6E-06 1.4E-10 80.3 18.3 31 34-64 219-251 (448)
63 KOG0645|consensus 98.5 1.9E-05 4.2E-10 70.9 19.1 159 34-282 63-223 (312)
64 KOG0279|consensus 98.5 3.3E-06 7.1E-11 76.0 14.1 116 34-211 65-181 (315)
65 KOG1446|consensus 98.5 5.6E-06 1.2E-10 75.4 15.4 123 30-211 139-263 (311)
66 KOG0639|consensus 98.5 2.8E-07 6.1E-12 88.4 7.3 116 32-211 465-582 (705)
67 PF08662 eIF2A: Eukaryotic tra 98.5 6E-06 1.3E-10 71.7 15.1 113 34-210 61-179 (194)
68 TIGR02800 propeller_TolB tol-p 98.5 8.2E-06 1.8E-10 77.9 17.0 50 12-64 216-267 (417)
69 KOG1274|consensus 98.5 1.3E-05 2.9E-10 81.6 18.5 211 34-284 15-262 (933)
70 PRK04922 tolB translocation pr 98.4 1.3E-05 2.8E-10 77.7 17.8 31 34-64 205-237 (433)
71 PRK01029 tolB translocation pr 98.4 1.7E-05 3.7E-10 77.0 18.4 28 183-210 330-359 (428)
72 TIGR02800 propeller_TolB tol-p 98.4 1.8E-05 3.9E-10 75.5 17.9 31 34-64 191-223 (417)
73 KOG0271|consensus 98.4 4.3E-06 9.4E-11 78.1 12.4 143 34-240 117-277 (480)
74 PTZ00420 coronin; Provisional 98.4 2.8E-05 6E-10 77.9 18.8 123 34-214 127-252 (568)
75 TIGR02276 beta_rpt_yvtn 40-res 98.4 1.4E-06 2.9E-11 56.2 6.3 34 189-225 1-34 (42)
76 PRK00178 tolB translocation pr 98.4 3.9E-05 8.6E-10 74.0 19.2 31 34-64 200-232 (430)
77 COG5276 Uncharacterized conser 98.4 2.2E-05 4.7E-10 71.6 15.6 127 34-225 88-214 (370)
78 KOG0310|consensus 98.3 3.9E-05 8.5E-10 73.4 17.8 172 11-282 134-307 (487)
79 PLN00181 protein SPA1-RELATED; 98.3 2.9E-05 6.4E-10 80.8 18.3 120 32-211 483-607 (793)
80 KOG0279|consensus 98.3 1E-05 2.3E-10 72.8 12.5 153 34-282 107-260 (315)
81 PRK04043 tolB translocation pr 98.3 3.3E-05 7.3E-10 74.8 17.0 51 11-64 214-266 (419)
82 KOG2055|consensus 98.3 9.8E-05 2.1E-09 70.5 19.1 63 180-276 345-407 (514)
83 KOG2110|consensus 98.3 2.7E-05 5.9E-10 72.4 15.1 136 14-211 110-249 (391)
84 KOG0283|consensus 98.3 3.4E-05 7.3E-10 77.8 16.9 90 180-276 452-566 (712)
85 KOG0771|consensus 98.3 6.3E-06 1.4E-10 77.5 10.4 30 181-211 283-312 (398)
86 KOG0645|consensus 98.3 6.8E-05 1.5E-09 67.4 16.3 119 34-210 16-135 (312)
87 KOG0772|consensus 98.3 5.1E-06 1.1E-10 80.1 9.7 124 37-213 273-397 (641)
88 PLN00181 protein SPA1-RELATED; 98.2 8.6E-05 1.9E-09 77.4 19.6 156 33-284 576-738 (793)
89 PRK01029 tolB translocation pr 98.2 0.00011 2.4E-09 71.4 19.0 28 37-64 189-220 (428)
90 PF06433 Me-amine-dh_H: Methyl 98.2 7.4E-05 1.6E-09 69.8 16.6 129 43-225 1-138 (342)
91 KOG0973|consensus 98.2 2.8E-05 6E-10 80.4 14.9 179 34-276 131-345 (942)
92 KOG0293|consensus 98.2 1.4E-05 3E-10 75.4 11.5 114 34-210 271-384 (519)
93 KOG0646|consensus 98.2 4.4E-05 9.4E-10 72.8 14.7 173 19-286 71-247 (476)
94 KOG2096|consensus 98.2 1.9E-05 4E-10 72.5 11.8 157 34-276 230-393 (420)
95 KOG2919|consensus 98.2 1.3E-05 2.8E-10 73.6 10.6 121 34-211 160-282 (406)
96 KOG0772|consensus 98.2 3.9E-05 8.6E-10 74.1 14.3 202 34-282 169-392 (641)
97 KOG0973|consensus 98.2 2.3E-05 5E-10 80.9 13.0 197 7-277 40-240 (942)
98 PTZ00421 coronin; Provisional 98.1 6.8E-05 1.5E-09 74.2 15.4 117 110-282 76-196 (493)
99 KOG0293|consensus 98.1 6.2E-05 1.3E-09 71.1 14.1 150 33-276 225-374 (519)
100 KOG0288|consensus 98.1 2.9E-05 6.3E-10 73.2 11.5 31 34-65 221-251 (459)
101 KOG2139|consensus 98.1 0.0001 2.3E-09 68.7 14.6 165 34-274 197-363 (445)
102 KOG0288|consensus 98.1 6.5E-05 1.4E-09 70.8 13.4 148 34-276 304-451 (459)
103 KOG0285|consensus 98.1 0.00014 3.1E-09 67.7 15.4 181 33-282 152-346 (460)
104 KOG0289|consensus 98.1 0.00016 3.5E-09 68.7 15.9 150 32-276 303-452 (506)
105 KOG0310|consensus 98.1 4.4E-05 9.6E-10 73.1 11.7 115 33-211 69-185 (487)
106 PRK04043 tolB translocation pr 98.1 0.00017 3.7E-09 69.9 16.0 29 36-64 191-222 (419)
107 KOG0284|consensus 98.0 6.7E-05 1.5E-09 70.7 12.2 175 29-276 93-284 (464)
108 KOG0265|consensus 98.0 0.00024 5.1E-09 64.8 14.6 186 32-284 47-246 (338)
109 KOG1274|consensus 98.0 0.00012 2.6E-09 74.8 14.0 145 10-210 118-262 (933)
110 COG5276 Uncharacterized conser 98.0 0.00091 2E-08 61.2 18.2 145 13-224 109-255 (370)
111 KOG2110|consensus 98.0 0.00051 1.1E-08 64.1 16.8 170 10-277 68-239 (391)
112 KOG1407|consensus 98.0 0.00031 6.8E-09 63.0 14.7 152 34-284 66-219 (313)
113 KOG0271|consensus 98.0 6.7E-05 1.5E-09 70.3 10.8 109 34-207 369-478 (480)
114 COG3490 Uncharacterized protei 98.0 3.6E-05 7.7E-10 70.0 8.7 64 185-281 119-186 (366)
115 KOG0286|consensus 98.0 0.0005 1.1E-08 62.6 16.0 162 15-274 171-333 (343)
116 COG3386 Gluconolactonase [Carb 98.0 0.00027 5.8E-09 65.8 14.8 112 110-276 163-275 (307)
117 KOG0643|consensus 97.9 0.00051 1.1E-08 61.9 15.3 155 33-276 53-210 (327)
118 TIGR02276 beta_rpt_yvtn 40-res 97.9 5.3E-05 1.1E-09 48.6 6.5 33 42-77 1-33 (42)
119 TIGR02604 Piru_Ver_Nterm putat 97.9 0.0005 1.1E-08 65.3 15.6 18 110-129 72-89 (367)
120 KOG0282|consensus 97.9 0.00013 2.8E-09 70.0 11.2 148 14-224 326-473 (503)
121 KOG0286|consensus 97.9 0.00064 1.4E-08 61.9 14.8 153 34-283 147-302 (343)
122 KOG0319|consensus 97.9 0.0003 6.6E-09 70.5 13.6 183 38-286 25-224 (775)
123 KOG0306|consensus 97.8 0.00061 1.3E-08 68.6 15.4 185 33-285 374-581 (888)
124 KOG0640|consensus 97.8 0.00056 1.2E-08 62.8 13.8 198 34-281 113-332 (430)
125 PF06433 Me-amine-dh_H: Methyl 97.8 0.00017 3.7E-09 67.5 10.6 89 10-129 17-114 (342)
126 KOG0278|consensus 97.8 0.00027 5.9E-09 63.2 11.2 130 13-210 168-297 (334)
127 KOG2394|consensus 97.8 0.00045 9.9E-09 67.3 12.9 146 34-220 221-369 (636)
128 KOG0275|consensus 97.8 0.00012 2.6E-09 67.4 8.6 176 32-276 263-457 (508)
129 KOG0273|consensus 97.7 0.00071 1.5E-08 64.9 13.7 62 180-277 453-514 (524)
130 KOG0267|consensus 97.7 0.0001 2.3E-09 73.7 8.4 174 34-279 72-262 (825)
131 KOG0302|consensus 97.7 0.00059 1.3E-08 64.0 11.6 120 34-210 259-378 (440)
132 COG3490 Uncharacterized protei 97.6 0.0019 4.2E-08 58.9 14.2 133 5-198 45-180 (366)
133 KOG0275|consensus 97.6 0.0012 2.7E-08 60.9 12.8 120 33-211 349-468 (508)
134 KOG4378|consensus 97.6 0.0023 5.1E-08 62.0 14.9 176 3-276 94-270 (673)
135 KOG1539|consensus 97.6 0.00027 5.8E-09 71.8 8.9 80 13-130 559-638 (910)
136 PF06977 SdiA-regulated: SdiA- 97.5 0.0051 1.1E-07 55.6 15.7 172 34-276 66-240 (248)
137 KOG2106|consensus 97.5 0.0029 6.3E-08 61.4 14.5 31 181-212 449-479 (626)
138 KOG0316|consensus 97.5 0.0057 1.2E-07 54.5 15.2 174 32-276 17-203 (307)
139 KOG0273|consensus 97.5 0.0059 1.3E-07 58.8 16.4 91 180-276 360-472 (524)
140 KOG0319|consensus 97.5 0.0017 3.7E-08 65.2 13.2 136 10-210 84-222 (775)
141 KOG0296|consensus 97.5 0.0037 8.1E-08 58.4 14.5 116 31-211 63-179 (399)
142 KOG1273|consensus 97.5 0.005 1.1E-07 56.8 14.8 116 35-210 68-183 (405)
143 KOG0306|consensus 97.4 0.0044 9.5E-08 62.7 15.2 27 182-209 457-483 (888)
144 KOG0289|consensus 97.4 0.0042 9.1E-08 59.3 14.3 171 11-282 242-417 (506)
145 KOG0285|consensus 97.4 0.0015 3.2E-08 61.0 11.1 132 12-211 175-308 (460)
146 KOG0265|consensus 97.4 0.014 3.1E-07 53.4 17.1 197 7-276 109-328 (338)
147 KOG0296|consensus 97.4 0.004 8.6E-08 58.3 13.8 114 33-211 107-221 (399)
148 KOG0299|consensus 97.4 0.0089 1.9E-07 57.4 16.3 63 181-276 382-445 (479)
149 KOG2048|consensus 97.4 0.015 3.3E-07 58.2 18.3 187 8-276 57-265 (691)
150 KOG0278|consensus 97.4 0.0054 1.2E-07 55.0 13.7 109 35-210 146-254 (334)
151 KOG0305|consensus 97.4 0.0043 9.4E-08 60.8 14.3 155 32-281 301-458 (484)
152 KOG0294|consensus 97.4 0.014 3E-07 53.9 16.3 200 10-285 63-282 (362)
153 KOG1273|consensus 97.4 0.0026 5.7E-08 58.6 11.6 148 35-276 26-173 (405)
154 PF03022 MRJP: Major royal jel 97.3 0.028 6.1E-07 51.8 18.4 202 14-277 38-256 (287)
155 KOG2394|consensus 97.3 0.00041 8.8E-09 67.6 6.3 61 34-129 292-352 (636)
156 KOG0640|consensus 97.3 0.013 2.8E-07 54.1 15.4 119 34-211 218-336 (430)
157 TIGR03606 non_repeat_PQQ dehyd 97.3 0.027 5.9E-07 55.2 18.4 28 34-62 31-58 (454)
158 KOG0643|consensus 97.3 0.011 2.4E-07 53.4 14.3 151 12-223 76-230 (327)
159 KOG0284|consensus 97.3 0.0089 1.9E-07 56.7 14.2 175 34-276 182-370 (464)
160 PF07995 GSDH: Glucose / Sorbo 97.3 0.0071 1.5E-07 56.8 13.7 26 34-61 3-28 (331)
161 KOG0771|consensus 97.3 0.0049 1.1E-07 58.4 12.3 49 13-65 169-217 (398)
162 COG4946 Uncharacterized protei 97.2 0.0035 7.6E-08 60.6 10.9 59 34-127 403-461 (668)
163 KOG2048|consensus 97.1 0.017 3.7E-07 57.8 15.2 157 32-284 25-184 (691)
164 KOG0294|consensus 97.1 0.012 2.5E-07 54.3 12.9 110 36-211 47-158 (362)
165 KOG2111|consensus 97.1 0.049 1.1E-06 50.3 16.7 64 180-276 182-246 (346)
166 KOG4497|consensus 97.1 0.0036 7.7E-08 58.1 9.2 62 180-276 92-153 (447)
167 KOG1445|consensus 97.1 0.0024 5.2E-08 63.5 8.4 119 34-211 629-751 (1012)
168 KOG0321|consensus 97.0 0.014 3E-07 58.2 13.2 137 34-211 102-249 (720)
169 KOG0650|consensus 97.0 0.026 5.6E-07 56.0 14.8 58 33-126 401-458 (733)
170 KOG0646|consensus 97.0 0.012 2.6E-07 56.6 12.1 125 40-211 184-308 (476)
171 COG4946 Uncharacterized protei 97.0 0.031 6.7E-07 54.3 14.9 73 110-210 402-477 (668)
172 KOG3881|consensus 97.0 0.011 2.3E-07 55.8 11.4 130 30-224 200-331 (412)
173 KOG1063|consensus 96.9 0.008 1.7E-07 60.3 11.0 118 35-211 528-649 (764)
174 PF15492 Nbas_N: Neuroblastoma 96.9 0.14 3E-06 46.7 18.0 39 180-222 230-268 (282)
175 KOG0295|consensus 96.9 0.019 4.2E-07 53.8 12.6 60 34-128 195-254 (406)
176 KOG2315|consensus 96.9 0.017 3.7E-07 56.7 12.7 57 184-276 316-374 (566)
177 KOG2111|consensus 96.9 0.082 1.8E-06 48.9 16.2 77 110-212 182-258 (346)
178 KOG4378|consensus 96.9 0.019 4.1E-07 55.9 12.5 118 32-211 164-281 (673)
179 COG0823 TolB Periplasmic compo 96.8 0.017 3.7E-07 56.2 12.3 18 113-130 241-258 (425)
180 COG3386 Gluconolactonase [Carb 96.8 0.051 1.1E-06 50.6 14.5 28 37-64 29-56 (307)
181 PF05096 Glu_cyclase_2: Glutam 96.7 0.094 2E-06 47.7 15.2 186 11-285 69-256 (264)
182 KOG1963|consensus 96.7 0.051 1.1E-06 55.8 14.7 114 36-212 209-324 (792)
183 KOG0283|consensus 96.7 0.042 9E-07 56.0 13.9 141 13-210 435-576 (712)
184 KOG2919|consensus 96.6 0.054 1.2E-06 50.3 13.1 123 33-214 208-331 (406)
185 KOG0647|consensus 96.6 0.12 2.5E-06 47.7 14.9 63 34-129 29-92 (347)
186 KOG4497|consensus 96.6 0.013 2.9E-07 54.4 8.9 129 110-276 92-230 (447)
187 KOG0264|consensus 96.6 0.061 1.3E-06 51.5 13.6 128 32-210 272-404 (422)
188 KOG0305|consensus 96.6 0.056 1.2E-06 53.2 13.6 32 32-64 217-248 (484)
189 KOG1445|consensus 96.5 0.012 2.6E-07 58.7 8.9 61 180-276 678-740 (1012)
190 KOG0308|consensus 96.5 0.083 1.8E-06 53.0 14.5 133 34-221 119-251 (735)
191 PF08309 LVIVD: LVIVD repeat; 96.5 0.0074 1.6E-07 39.3 5.0 34 189-223 9-42 (42)
192 KOG0268|consensus 96.5 0.017 3.7E-07 54.2 9.1 115 34-211 189-303 (433)
193 KOG1408|consensus 96.5 0.034 7.4E-07 56.4 11.6 129 19-211 66-195 (1080)
194 PF10647 Gmad1: Lipoprotein Lp 96.4 0.4 8.7E-06 43.2 17.7 30 181-210 113-144 (253)
195 KOG0303|consensus 96.4 0.056 1.2E-06 51.3 12.1 117 34-209 83-202 (472)
196 KOG0299|consensus 96.3 0.043 9.3E-07 52.8 10.9 127 34-211 144-275 (479)
197 COG0823 TolB Periplasmic compo 96.3 0.083 1.8E-06 51.5 13.2 32 32-63 237-270 (425)
198 COG4257 Vgb Streptogramin lyas 96.2 0.1 2.3E-06 47.7 12.4 62 32-129 61-122 (353)
199 KOG1009|consensus 96.2 0.064 1.4E-06 51.0 11.4 30 180-210 124-153 (434)
200 KOG0295|consensus 96.2 0.052 1.1E-06 51.0 10.5 32 179-211 334-365 (406)
201 KOG1036|consensus 96.2 0.16 3.4E-06 46.8 13.3 60 182-276 235-294 (323)
202 KOG0321|consensus 96.2 0.21 4.6E-06 50.0 15.1 129 38-214 223-351 (720)
203 KOG2315|consensus 96.1 0.14 3E-06 50.5 13.6 113 33-210 271-390 (566)
204 KOG2321|consensus 96.1 0.89 1.9E-05 45.4 18.8 100 181-289 230-345 (703)
205 KOG1034|consensus 96.1 0.35 7.6E-06 45.1 15.1 91 7-131 112-202 (385)
206 PF08309 LVIVD: LVIVD repeat; 96.0 0.043 9.3E-07 35.7 6.5 38 34-74 3-40 (42)
207 PRK13616 lipoprotein LpqB; Pro 95.9 0.46 1E-05 48.2 17.0 27 181-209 449-475 (591)
208 KOG4328|consensus 95.9 0.11 2.3E-06 50.2 11.3 76 111-210 324-399 (498)
209 PF02897 Peptidase_S9_N: Proly 95.9 1.2 2.7E-05 42.5 19.0 30 182-211 229-261 (414)
210 PF07995 GSDH: Glucose / Sorbo 95.8 0.09 2E-06 49.3 10.7 17 259-276 116-132 (331)
211 KOG0264|consensus 95.8 0.091 2E-06 50.3 10.6 120 34-211 229-348 (422)
212 KOG0277|consensus 95.8 0.3 6.5E-06 44.2 13.1 179 31-276 59-254 (311)
213 KOG0316|consensus 95.8 1.3 2.7E-05 39.9 16.8 178 7-225 78-269 (307)
214 KOG2139|consensus 95.8 0.029 6.2E-07 52.8 6.9 68 180-281 196-265 (445)
215 KOG0269|consensus 95.8 0.15 3.3E-06 52.1 12.3 118 34-212 135-252 (839)
216 KOG0322|consensus 95.7 0.044 9.6E-07 49.6 7.5 68 180-282 252-321 (323)
217 KOG0290|consensus 95.6 0.19 4E-06 46.2 11.4 38 29-66 193-230 (364)
218 KOG4227|consensus 95.6 0.35 7.7E-06 46.1 13.5 120 34-211 58-180 (609)
219 KOG0307|consensus 95.6 0.12 2.7E-06 54.5 11.4 38 31-68 115-152 (1049)
220 PF00400 WD40: WD domain, G-be 95.6 0.042 9E-07 34.0 5.2 28 33-61 12-39 (39)
221 TIGR03606 non_repeat_PQQ dehyd 95.5 0.23 5E-06 48.7 12.3 18 110-128 30-47 (454)
222 KOG0292|consensus 95.4 0.43 9.4E-06 49.8 14.2 29 34-63 11-39 (1202)
223 PF01731 Arylesterase: Arylest 95.3 0.031 6.7E-07 42.2 4.5 31 34-64 55-85 (86)
224 TIGR03118 PEPCTERM_chp_1 conse 95.3 0.36 7.8E-06 44.8 12.0 29 34-63 24-52 (336)
225 KOG1963|consensus 95.2 0.54 1.2E-05 48.5 14.3 59 35-129 254-312 (792)
226 KOG0649|consensus 95.2 1.2 2.6E-05 40.2 14.8 97 181-282 116-233 (325)
227 KOG1036|consensus 95.2 0.82 1.8E-05 42.2 13.9 30 34-64 15-44 (323)
228 PF00930 DPPIV_N: Dipeptidyl p 95.1 0.13 2.8E-06 48.5 9.3 91 182-274 103-201 (353)
229 KOG4328|consensus 95.1 0.7 1.5E-05 44.8 13.9 66 181-276 324-389 (498)
230 KOG3914|consensus 95.1 0.39 8.5E-06 45.6 12.0 145 34-238 64-222 (390)
231 KOG0313|consensus 95.1 0.24 5.1E-06 46.9 10.4 117 34-212 262-378 (423)
232 KOG0641|consensus 95.0 1.1 2.3E-05 40.1 13.8 30 180-210 274-303 (350)
233 KOG0313|consensus 95.0 0.89 1.9E-05 43.2 13.9 99 180-282 261-374 (423)
234 KOG0268|consensus 94.9 0.21 4.6E-06 47.1 9.5 30 181-210 189-218 (433)
235 PF00400 WD40: WD domain, G-be 94.8 0.078 1.7E-06 32.7 4.6 28 180-208 12-39 (39)
236 KOG1063|consensus 94.7 0.05 1.1E-06 54.8 5.2 68 181-282 527-600 (764)
237 KOG3881|consensus 94.7 0.95 2.1E-05 43.1 13.3 61 181-275 249-309 (412)
238 KOG0650|consensus 94.7 0.79 1.7E-05 45.9 13.3 181 32-276 521-725 (733)
239 KOG0269|consensus 94.6 0.11 2.4E-06 53.0 7.5 119 34-212 178-298 (839)
240 KOG0322|consensus 94.6 0.051 1.1E-06 49.2 4.6 61 34-129 253-313 (323)
241 KOG0303|consensus 94.6 1.5 3.3E-05 41.9 14.4 136 16-211 160-295 (472)
242 KOG0292|consensus 94.4 0.36 7.8E-06 50.3 10.7 114 32-210 51-165 (1202)
243 TIGR02604 Piru_Ver_Nterm putat 94.4 0.44 9.5E-06 45.2 10.9 18 110-128 14-31 (367)
244 PF02333 Phytase: Phytase; In 94.4 2.1 4.6E-05 41.1 15.3 135 34-223 157-301 (381)
245 KOG1188|consensus 94.3 0.92 2E-05 42.5 12.2 32 180-211 166-197 (376)
246 COG2319 FOG: WD40 repeat [Gene 94.3 3.7 8E-05 36.5 16.7 31 180-210 199-229 (466)
247 PF13449 Phytase-like: Esteras 94.2 0.16 3.4E-06 47.6 7.3 75 181-276 86-166 (326)
248 KOG1272|consensus 94.1 0.18 3.9E-06 48.9 7.5 32 180-212 294-325 (545)
249 PF11768 DUF3312: Protein of u 94.0 2.5 5.4E-05 42.2 15.3 61 179-276 259-319 (545)
250 PF01731 Arylesterase: Arylest 93.9 0.1 2.2E-06 39.4 4.4 31 180-210 54-84 (86)
251 KOG1538|consensus 93.9 1.2 2.7E-05 45.3 12.8 133 34-207 14-159 (1081)
252 KOG1523|consensus 93.8 1.4 3.1E-05 41.0 12.4 178 2-272 37-222 (361)
253 COG2319 FOG: WD40 repeat [Gene 93.7 4.7 0.0001 35.8 18.3 31 34-64 157-187 (466)
254 PF01436 NHL: NHL repeat; Int 93.7 0.15 3.2E-06 29.9 3.9 26 181-207 3-28 (28)
255 PF15492 Nbas_N: Neuroblastoma 93.6 0.27 5.8E-06 44.9 7.3 27 183-210 47-73 (282)
256 PF00930 DPPIV_N: Dipeptidyl p 93.6 4.6 9.9E-05 38.0 16.1 48 12-64 25-72 (353)
257 PRK13616 lipoprotein LpqB; Pro 93.6 0.48 1E-05 48.1 9.8 19 257-275 448-466 (591)
258 KOG0647|consensus 93.4 0.16 3.5E-06 46.7 5.5 31 181-212 29-60 (347)
259 COG5354 Uncharacterized protei 93.3 1.9 4E-05 42.5 12.8 116 31-211 273-396 (561)
260 COG4257 Vgb Streptogramin lyas 93.3 0.98 2.1E-05 41.5 10.3 131 14-209 87-217 (353)
261 PF06977 SdiA-regulated: SdiA- 93.2 4.7 0.0001 36.4 14.7 126 33-210 22-147 (248)
262 PF11768 DUF3312: Protein of u 93.2 0.46 1E-05 47.2 8.7 64 29-129 256-319 (545)
263 COG2133 Glucose/sorbosone dehy 93.1 9 0.00019 37.1 17.4 20 257-276 367-386 (399)
264 KOG0308|consensus 93.1 1.3 2.8E-05 44.7 11.6 117 34-214 173-289 (735)
265 PF03088 Str_synth: Strictosid 93.0 0.43 9.2E-06 36.3 6.5 18 258-275 58-75 (89)
266 PF09826 Beta_propel: Beta pro 93.0 1.9 4E-05 43.2 12.8 34 42-77 20-53 (521)
267 PF03088 Str_synth: Strictosid 92.9 0.66 1.4E-05 35.2 7.4 19 110-128 57-75 (89)
268 PF05787 DUF839: Bacterial pro 92.7 2.7 5.9E-05 42.1 13.6 20 34-53 351-370 (524)
269 KOG1408|consensus 92.7 1.4 3E-05 45.2 11.3 116 34-210 598-713 (1080)
270 KOG2106|consensus 92.4 0.67 1.5E-05 45.5 8.4 62 32-126 447-508 (626)
271 PF04053 Coatomer_WDAD: Coatom 92.4 2.4 5.1E-05 41.6 12.5 48 191-276 117-164 (443)
272 PF01436 NHL: NHL repeat; Int 92.4 0.5 1.1E-05 27.6 4.9 26 34-60 3-28 (28)
273 KOG1332|consensus 92.4 8.3 0.00018 34.9 15.9 40 34-74 13-52 (299)
274 KOG2445|consensus 92.3 5.1 0.00011 37.3 13.5 43 34-77 15-58 (361)
275 PF04762 IKI3: IKI3 family; I 92.1 5.5 0.00012 42.8 15.7 118 34-210 211-333 (928)
276 COG3204 Uncharacterized protei 91.7 1.8 3.9E-05 40.0 9.9 112 111-276 87-200 (316)
277 KOG0267|consensus 91.4 0.24 5.3E-06 50.3 4.4 102 182-289 73-192 (825)
278 KOG2314|consensus 91.4 2.1 4.6E-05 42.6 10.6 116 36-209 214-333 (698)
279 KOG4283|consensus 91.4 7.8 0.00017 36.0 13.6 75 180-274 189-264 (397)
280 KOG1034|consensus 91.3 1.1 2.3E-05 42.0 8.1 30 180-210 182-211 (385)
281 COG2133 Glucose/sorbosone dehy 91.3 9.1 0.0002 37.1 14.8 27 34-61 68-94 (399)
282 TIGR03300 assembly_YfgL outer 90.9 2.6 5.6E-05 39.7 10.8 32 190-225 319-350 (377)
283 KOG1520|consensus 90.5 10 0.00022 36.2 14.1 20 110-129 115-134 (376)
284 KOG1272|consensus 90.3 1.7 3.6E-05 42.4 8.7 30 34-64 131-160 (545)
285 COG3823 Glutamine cyclotransfe 90.1 8.6 0.00019 34.1 12.2 64 190-276 185-248 (262)
286 KOG1007|consensus 89.8 7.1 0.00015 36.2 11.9 83 14-130 197-279 (370)
287 smart00135 LY Low-density lipo 89.6 0.84 1.8E-05 28.4 4.4 30 34-63 10-39 (43)
288 KOG4283|consensus 89.6 18 0.00038 33.8 14.3 147 12-211 126-277 (397)
289 KOG0301|consensus 89.4 5.6 0.00012 40.6 11.8 106 34-210 103-208 (745)
290 KOG0276|consensus 89.3 8.9 0.00019 39.0 13.0 116 34-210 142-257 (794)
291 PF02333 Phytase: Phytase; In 89.2 22 0.00047 34.3 15.4 30 179-209 207-236 (381)
292 KOG0300|consensus 88.9 8.9 0.00019 36.0 11.9 130 12-210 296-428 (481)
293 smart00135 LY Low-density lipo 88.7 0.91 2E-05 28.2 4.1 30 181-210 10-39 (43)
294 PF13360 PQQ_2: PQQ-like domai 88.6 13 0.00028 31.9 12.8 24 40-64 32-55 (238)
295 KOG4227|consensus 88.6 6.2 0.00013 37.9 10.9 119 35-214 108-229 (609)
296 KOG0300|consensus 88.5 7.2 0.00016 36.6 11.1 31 180-212 358-388 (481)
297 KOG0281|consensus 88.5 2.1 4.5E-05 40.5 7.7 21 190-211 329-349 (499)
298 KOG4547|consensus 88.4 18 0.0004 36.1 14.5 29 180-211 145-173 (541)
299 COG4590 ABC-type uncharacteriz 88.3 3 6.5E-05 40.9 8.9 52 7-61 92-143 (733)
300 KOG0307|consensus 88.1 2.3 5.1E-05 45.3 8.6 99 180-282 117-238 (1049)
301 KOG0301|consensus 87.5 15 0.00032 37.7 13.4 110 32-210 140-249 (745)
302 KOG1214|consensus 87.4 13 0.00028 39.1 13.1 107 34-201 1026-1132(1289)
303 PF02897 Peptidase_S9_N: Proly 87.4 4.5 9.8E-05 38.6 9.8 16 261-276 231-246 (414)
304 PF07676 PD40: WD40-like Beta 87.3 1.2 2.6E-05 27.6 3.9 17 183-199 12-29 (39)
305 KOG0276|consensus 86.6 41 0.00088 34.4 17.9 169 34-238 15-214 (794)
306 KOG3914|consensus 86.4 11 0.00025 36.0 11.4 30 180-211 195-224 (390)
307 KOG0974|consensus 86.3 3.6 7.7E-05 43.6 8.7 111 33-210 176-288 (967)
308 PF13449 Phytase-like: Esteras 85.9 5.6 0.00012 37.1 9.3 75 34-129 86-166 (326)
309 KOG1587|consensus 85.2 42 0.00091 34.0 15.5 34 34-67 244-277 (555)
310 KOG0274|consensus 85.1 10 0.00022 38.1 11.2 144 31-212 248-402 (537)
311 KOG4659|consensus 84.8 23 0.00049 39.2 13.7 26 181-209 476-501 (1899)
312 KOG0642|consensus 84.5 3.2 6.9E-05 41.3 7.0 27 182-209 347-373 (577)
313 PF04762 IKI3: IKI3 family; I 84.1 58 0.0012 35.2 16.8 62 33-129 76-140 (928)
314 PF14583 Pectate_lyase22: Olig 83.8 22 0.00048 34.3 12.2 18 111-128 239-256 (386)
315 COG3204 Uncharacterized protei 83.3 39 0.00084 31.5 15.2 123 34-210 87-210 (316)
316 KOG0277|consensus 83.1 9.6 0.00021 34.7 8.9 117 34-210 149-265 (311)
317 smart00320 WD40 WD40 repeats. 83.0 3.1 6.7E-05 23.1 4.2 27 34-61 14-40 (40)
318 KOG1538|consensus 82.6 2.5 5.4E-05 43.1 5.5 30 181-212 14-43 (1081)
319 COG5354 Uncharacterized protei 82.6 12 0.00026 37.1 9.9 26 185-210 321-348 (561)
320 PF10647 Gmad1: Lipoprotein Lp 82.2 37 0.0008 30.4 15.8 19 111-129 113-131 (253)
321 PF07676 PD40: WD40-like Beta 81.7 4 8.7E-05 25.2 4.5 27 34-60 10-38 (39)
322 KOG2314|consensus 81.4 21 0.00046 35.9 11.2 110 31-198 444-556 (698)
323 PF05096 Glu_cyclase_2: Glutam 81.2 38 0.00081 31.0 12.2 32 188-223 136-167 (264)
324 KOG4499|consensus 81.0 9.6 0.00021 34.4 8.0 91 111-221 159-249 (310)
325 KOG0290|consensus 81.0 3.1 6.7E-05 38.5 5.1 92 180-275 197-307 (364)
326 KOG4659|consensus 80.9 39 0.00084 37.5 13.6 31 32-64 406-436 (1899)
327 PRK10115 protease 2; Provision 80.8 75 0.0016 33.0 17.4 29 35-63 129-161 (686)
328 PF09826 Beta_propel: Beta pro 79.8 4.7 0.0001 40.4 6.5 35 189-225 20-54 (521)
329 KOG0274|consensus 79.3 43 0.00094 33.7 13.1 28 185-213 295-322 (537)
330 PRK11138 outer membrane biogen 79.2 37 0.0008 32.2 12.3 30 191-224 335-364 (394)
331 KOG1240|consensus 79.1 34 0.00073 37.6 12.5 28 37-64 1053-1080(1431)
332 smart00320 WD40 WD40 repeats. 78.8 4.1 9E-05 22.5 3.7 27 181-208 14-40 (40)
333 KOG0302|consensus 78.7 19 0.00041 34.5 9.6 66 32-129 302-367 (440)
334 PF08553 VID27: VID27 cytoplas 78.7 34 0.00075 36.1 12.5 60 183-278 581-640 (794)
335 KOG1520|consensus 78.1 67 0.0014 30.9 14.5 25 31-55 113-137 (376)
336 KOG4532|consensus 77.6 60 0.0013 30.0 15.0 160 35-277 161-323 (344)
337 KOG1007|consensus 77.2 34 0.00074 31.8 10.5 32 181-212 216-247 (370)
338 KOG1332|consensus 76.4 18 0.00039 32.8 8.4 29 180-209 257-285 (299)
339 PF05787 DUF839: Bacterial pro 76.1 5.8 0.00012 39.8 5.9 20 108-127 500-519 (524)
340 TIGR03032 conserved hypothetic 75.7 13 0.00029 34.9 7.6 73 12-128 187-259 (335)
341 KOG1517|consensus 75.6 75 0.0016 34.7 13.7 51 11-64 1188-1240(1387)
342 COG3211 PhoX Predicted phospha 74.5 7.7 0.00017 39.0 6.1 19 109-127 553-571 (616)
343 KOG1214|consensus 73.9 18 0.00039 38.1 8.7 125 20-210 1102-1226(1289)
344 PRK10115 protease 2; Provision 73.9 67 0.0015 33.3 13.2 29 183-211 175-208 (686)
345 KOG0270|consensus 71.3 1.1E+02 0.0023 30.0 15.9 119 32-211 286-405 (463)
346 KOG0281|consensus 71.2 21 0.00045 34.0 7.7 28 34-64 322-349 (499)
347 PF12894 Apc4_WD40: Anaphase-p 71.1 17 0.00038 23.9 5.4 31 31-62 10-40 (47)
348 PF14870 PSII_BNR: Photosynthe 70.9 19 0.0004 33.6 7.5 21 181-201 146-166 (302)
349 COG4676 Uncharacterized protei 70.4 26 0.00056 31.1 7.7 80 185-281 95-178 (268)
350 TIGR03032 conserved hypothetic 70.2 16 0.00035 34.3 6.9 58 190-287 212-269 (335)
351 KOG0270|consensus 69.5 1.2E+02 0.0025 29.8 14.1 59 37-129 248-306 (463)
352 PF10168 Nup88: Nuclear pore c 69.5 1.5E+02 0.0033 31.1 14.5 98 110-222 85-191 (717)
353 KOG1524|consensus 69.4 1.1E+02 0.0024 30.9 12.6 24 38-62 110-133 (737)
354 KOG2395|consensus 69.1 57 0.0012 32.8 10.6 21 258-278 473-493 (644)
355 PF13360 PQQ_2: PQQ-like domai 69.0 72 0.0016 27.2 11.9 24 187-211 208-231 (238)
356 KOG4640|consensus 68.8 9.8 0.00021 38.6 5.4 45 9-66 51-95 (665)
357 COG4590 ABC-type uncharacteriz 66.6 24 0.00053 34.8 7.4 32 31-64 219-250 (733)
358 KOG4547|consensus 66.6 1.1E+02 0.0024 30.7 12.2 116 31-211 101-221 (541)
359 KOG0641|consensus 65.6 1E+02 0.0023 27.7 16.0 62 180-276 232-293 (350)
360 KOG1587|consensus 63.8 23 0.00049 35.9 7.0 88 7-129 418-506 (555)
361 KOG1310|consensus 63.3 73 0.0016 32.3 10.1 41 34-78 52-92 (758)
362 PF10313 DUF2415: Uncharacteri 63.2 22 0.00048 23.2 4.5 28 182-210 3-33 (43)
363 PF15390 DUF4613: Domain of un 63.1 43 0.00093 34.1 8.6 87 11-129 316-404 (671)
364 PF10313 DUF2415: Uncharacteri 61.4 40 0.00087 22.0 5.5 30 34-64 2-34 (43)
365 KOG1517|consensus 61.3 2.6E+02 0.0056 30.8 15.0 88 193-281 1222-1330(1387)
366 COG3211 PhoX Predicted phospha 57.4 28 0.00061 35.2 6.2 18 110-127 417-434 (616)
367 KOG1240|consensus 57.0 1.7E+02 0.0037 32.5 12.2 30 180-210 1196-1225(1431)
368 PRK13614 lipoprotein LpqB; Pro 55.9 2.4E+02 0.0052 28.8 17.5 31 180-210 434-466 (573)
369 KOG4714|consensus 55.7 14 0.00031 33.8 3.6 68 34-134 181-249 (319)
370 KOG1645|consensus 55.1 38 0.00082 32.8 6.4 78 109-215 193-271 (463)
371 KOG2079|consensus 53.5 47 0.001 36.0 7.4 33 31-64 129-161 (1206)
372 KOG0642|consensus 52.6 50 0.0011 33.2 7.0 29 34-63 346-374 (577)
373 PF08954 DUF1900: Domain of un 50.9 64 0.0014 26.4 6.5 39 185-223 16-55 (136)
374 TIGR03118 PEPCTERM_chp_1 conse 50.6 71 0.0015 30.0 7.4 27 183-210 26-52 (336)
375 KOG1009|consensus 50.6 58 0.0013 31.5 6.9 28 182-210 68-95 (434)
376 KOG4499|consensus 50.5 42 0.0009 30.5 5.6 55 11-76 197-251 (310)
377 KOG2321|consensus 49.4 22 0.00048 35.9 4.1 31 181-211 53-83 (703)
378 KOG4532|consensus 48.3 1.2E+02 0.0026 28.1 8.2 18 112-129 161-178 (344)
379 PRK13613 lipoprotein LpqB; Pro 48.1 3.2E+02 0.007 28.0 16.2 29 34-62 364-392 (599)
380 PF13570 PQQ_3: PQQ-like domai 47.6 33 0.00071 21.2 3.4 20 43-63 20-39 (40)
381 TIGR03300 assembly_YfgL outer 45.3 1.7E+02 0.0036 27.3 9.4 21 43-64 64-84 (377)
382 cd00216 PQQ_DH Dehydrogenases 44.5 3.2E+02 0.007 26.9 12.8 32 190-225 405-436 (488)
383 PRK13615 lipoprotein LpqB; Pro 44.0 1.8E+02 0.0039 29.6 9.7 19 111-129 335-353 (557)
384 KOG0974|consensus 43.3 67 0.0015 34.4 6.7 31 180-211 176-206 (967)
385 KOG1645|consensus 40.9 78 0.0017 30.7 6.2 56 10-68 216-271 (463)
386 COG4247 Phy 3-phytase (myo-ino 40.8 3E+02 0.0064 25.5 17.4 142 34-224 154-300 (364)
387 PRK13613 lipoprotein LpqB; Pro 39.9 1.7E+02 0.0037 30.0 8.9 19 111-129 364-382 (599)
388 PF14583 Pectate_lyase22: Olig 39.3 34 0.00074 33.0 3.6 25 184-209 355-380 (386)
389 KOG1275|consensus 39.2 73 0.0016 34.1 6.1 29 179-208 312-340 (1118)
390 PF08553 VID27: VID27 cytoplas 39.0 67 0.0015 34.0 5.9 21 109-129 618-638 (794)
391 PF12894 Apc4_WD40: Anaphase-p 38.9 1E+02 0.0022 20.2 4.9 28 181-209 13-40 (47)
392 PF08954 DUF1900: Domain of un 38.3 1.1E+02 0.0024 24.9 6.0 31 35-65 13-43 (136)
393 PF06739 SBBP: Beta-propeller 35.3 57 0.0012 20.3 3.1 21 34-55 14-34 (38)
394 KOG0280|consensus 35.2 3.8E+02 0.0083 25.1 11.8 28 36-64 125-152 (339)
395 KOG2079|consensus 34.0 1.1E+02 0.0024 33.3 6.6 31 180-211 131-161 (1206)
396 PF14655 RAB3GAP2_N: Rab3 GTPa 32.9 79 0.0017 30.8 5.1 30 34-64 309-338 (415)
397 PRK13615 lipoprotein LpqB; Pro 32.8 5.5E+02 0.012 26.1 16.2 31 180-210 417-449 (557)
398 TIGR02608 delta_60_rpt delta-6 32.7 1.6E+02 0.0034 20.2 5.1 18 35-52 3-20 (55)
399 KOG3621|consensus 32.3 2.4E+02 0.0052 29.4 8.4 30 180-210 125-154 (726)
400 COG5170 CDC55 Serine/threonine 31.7 48 0.001 31.2 3.2 25 183-209 284-308 (460)
401 PF10584 Proteasome_A_N: Prote 30.5 20 0.00043 20.2 0.3 8 186-193 7-14 (23)
402 PRK13614 lipoprotein LpqB; Pro 29.9 3.1E+02 0.0068 28.0 8.9 19 111-129 344-362 (573)
403 PF15390 DUF4613: Domain of un 29.7 3E+02 0.0065 28.3 8.5 72 184-287 343-414 (671)
404 PF12913 SH3_6: SH3 domain of 29.5 43 0.00092 23.0 1.9 22 260-281 30-51 (54)
405 TIGR02171 Fb_sc_TIGR02171 Fibr 29.2 2.7E+02 0.0057 30.1 8.4 20 43-63 318-337 (912)
406 COG1770 PtrB Protease II [Amin 28.8 6.9E+02 0.015 26.1 12.4 33 181-213 225-259 (682)
407 PF14761 HPS3_N: Hermansky-Pud 28.0 2.2E+02 0.0048 25.2 6.6 33 191-225 27-60 (215)
408 PF14870 PSII_BNR: Photosynthe 27.9 3.4E+02 0.0074 25.2 8.2 27 34-61 146-172 (302)
409 PRK13684 Ycf48-like protein; P 27.4 3.1E+02 0.0066 25.6 7.9 20 181-200 174-193 (334)
410 KOG2445|consensus 27.1 2.6E+02 0.0057 26.4 7.0 43 181-224 15-58 (361)
411 PF14761 HPS3_N: Hermansky-Pud 26.9 2.7E+02 0.0059 24.6 6.9 53 44-130 27-80 (215)
412 PF00780 CNH: CNH domain; Int 26.6 4.4E+02 0.0095 23.1 15.2 24 41-66 4-27 (275)
413 PF03022 MRJP: Major royal jel 26.2 5E+02 0.011 23.6 9.4 29 35-64 188-216 (287)
414 KOG1524|consensus 25.3 5.1E+02 0.011 26.4 9.0 28 181-209 258-285 (737)
415 PF14655 RAB3GAP2_N: Rab3 GTPa 24.2 1.2E+02 0.0026 29.6 4.6 30 181-211 309-338 (415)
416 KOG4640|consensus 22.6 1.5E+02 0.0033 30.4 4.9 29 183-212 66-94 (665)
417 PF07250 Glyoxal_oxid_N: Glyox 21.2 2.8E+02 0.006 25.0 6.1 29 181-209 68-98 (243)
418 KOG1354|consensus 20.7 1.6E+02 0.0034 28.2 4.4 38 182-221 275-312 (433)
419 KOG2395|consensus 20.1 1.4E+02 0.0031 30.1 4.2 21 109-129 471-491 (644)
No 1
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=3.3e-27 Score=215.55 Aligned_cols=200 Identities=20% Similarity=0.303 Sum_probs=140.0
Q ss_pred CCCC-ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCcee-eeEEeeccc---------------ccCCCceEEe-cC
Q psy11412 30 KVPA-MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVL-VGQIFLGGK---------------IQSDSGVTVI-DD 91 (290)
Q Consensus 30 ~v~~-~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~-~~~i~~g~~---------------~~~~~~~~v~-~~ 91 (290)
.+++ .||++++++||++|+++||..|.|+++.+.+.+.+.. ++.+...+. .++.++..+. +.
T Consensus 85 ~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL 164 (346)
T COG2706 85 TLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL 164 (346)
T ss_pred ccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec
Confidence 3444 4599999999999999999999999999976555543 333322221 1122322222 21
Q ss_pred CC-------C-cCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccc
Q psy11412 92 PE-------L-DKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEM 163 (290)
Q Consensus 92 ~~-------~-~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i 163 (290)
.. + +....+.......+|+|||||+|||+||.+|+++||.+++++..|.. ..+.+..++ .+
T Consensus 165 G~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~---~~g~~~~lQ--------~i 233 (346)
T COG2706 165 GTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP---AVGKFEELQ--------TI 233 (346)
T ss_pred CCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC---CCceEEEee--------ee
Confidence 10 0 11111111122356899999999999999999999999999887753 123343333 33
Q ss_pred cccCccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCC-CCceEeeEEeeCceecCCCceEEecCCCCC
Q psy11412 164 RSMPLSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDT-AHPVLVGQIFLGGKIQSDSGVTVIDDPELD 242 (290)
Q Consensus 164 ~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~-~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~ 242 (290)
.++|.. ..+..+.++|++||||||||+|||++++|++|.|+.- +.+..++.++++|+
T Consensus 234 ~tlP~d------F~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~---------------- 291 (346)
T COG2706 234 DTLPED------FTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQ---------------- 291 (346)
T ss_pred ccCccc------cCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCc----------------
Confidence 444432 2334688999999999999999999999999999643 34667888888883
Q ss_pred CCCCcceeecccccCCcceEEEccCCCEEEEEcCC
Q psy11412 243 KQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSL 277 (290)
Q Consensus 243 ~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~~ 277 (290)
.||+|.|+|+|++|+|||+-
T Consensus 292 ---------------~PR~F~i~~~g~~Liaa~q~ 311 (346)
T COG2706 292 ---------------FPRDFNINPSGRFLIAANQK 311 (346)
T ss_pred ---------------CCccceeCCCCCEEEEEccC
Confidence 69999999999999999983
No 2
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.95 E-value=4.2e-26 Score=214.37 Aligned_cols=168 Identities=26% Similarity=0.383 Sum_probs=124.9
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCC-CceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccC
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTA-HPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFT 109 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~-~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g 109 (290)
...+||++.++|||++|||++++.+.|.+|+++... .+.....+. .+.|
T Consensus 142 ~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~------------------------------~~~G 191 (345)
T PF10282_consen 142 EGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIK------------------------------VPPG 191 (345)
T ss_dssp SSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEE------------------------------CSTT
T ss_pred ccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccc------------------------------cccC
Confidence 455999999999999999999999999999997532 122222221 1246
Q ss_pred CCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEcc
Q psy11412 110 GSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISL 189 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~Sp 189 (290)
.+||||+|||||+++||++|+.+.+.++.+.. ..+.+..++... ++|. + ..+...+++|+|||
T Consensus 192 ~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~---~~g~~~~~~~~~--------~~~~----~--~~~~~~~~~i~isp 254 (345)
T PF10282_consen 192 SGPRHLAFSPDGKYAYVVNELSNTVSVFDYDP---SDGSLTEIQTIS--------TLPE----G--FTGENAPAEIAISP 254 (345)
T ss_dssp SSEEEEEE-TTSSEEEEEETTTTEEEEEEEET---TTTEEEEEEEEE--------SCET----T--SCSSSSEEEEEE-T
T ss_pred CCCcEEEEcCCcCEEEEecCCCCcEEEEeecc---cCCceeEEEEee--------eccc----c--ccccCCceeEEEec
Confidence 89999999999999999999999888876642 122333333322 2221 1 11124789999999
Q ss_pred CCCEEEEEeCCCCcEEEEEec-CCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCC
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIR-DTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDG 268 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~-d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG 268 (290)
|||+||+|||++|+|++|++. ..+.++.++.++++|. +||+|+|+|||
T Consensus 255 dg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~-------------------------------~Pr~~~~s~~g 303 (345)
T PF10282_consen 255 DGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGK-------------------------------FPRHFAFSPDG 303 (345)
T ss_dssp TSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSS-------------------------------SEEEEEE-TTS
T ss_pred CCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCC-------------------------------CccEEEEeCCC
Confidence 999999999999999999994 3456788999999773 79999999999
Q ss_pred CEEEEEcC
Q psy11412 269 KRIYVSSS 276 (290)
Q Consensus 269 ~~L~Van~ 276 (290)
++|||+|+
T Consensus 304 ~~l~Va~~ 311 (345)
T PF10282_consen 304 RYLYVANQ 311 (345)
T ss_dssp SEEEEEET
T ss_pred CEEEEEec
Confidence 99999997
No 3
>KOG0918|consensus
Probab=99.90 E-value=2.3e-23 Score=192.40 Aligned_cols=125 Identities=57% Similarity=1.072 Sum_probs=116.2
Q ss_pred cCccccCccccCCC-CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCC
Q psy11412 166 MPLSSLGSWKYPAR-SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQ 244 (290)
Q Consensus 166 ~p~~~~~~~~~~~~-~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~ 244 (290)
+|...+++|.+++- +..++|.+|=|-||||+++|.++.|+.|||+||.++++.+++-+||.+..+..|.|.....+..+
T Consensus 297 vp~~kv~~w~~~eMP~LITDilISmDDRFLYvs~WLHGDirQYdIsDP~n~kLtgQi~lGG~i~~~s~vkvl~~e~~~~~ 376 (476)
T KOG0918|consen 297 VPPLKVENWILPEMPGLITDILISLDDRFLYVSNWLHGDIRQYDISDPKNPKLTGQIFLGGSIQKGSPVKVLEEEGLKKQ 376 (476)
T ss_pred cCccccccccCcccchhhheeEEeecCcEEEEEeeeecceeeeccCCCCCcceEEEEEECcEeecCCceEEeccccccCC
Confidence 55667788988774 57889999999999999999999999999999999999999999999999999999988777788
Q ss_pred CCcceeecccccCCcceEEEccCCCEEEEEcCCCCCCCcccCCCCC
Q psy11412 245 PDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLV 290 (290)
Q Consensus 245 ~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~~~~~~~~~~~~~~~ 290 (290)
|.+..++|+++.|+|+++.||-|||||||+|++||+||+|||||||
T Consensus 377 ~ea~~vKGrkl~GGPQMlQLSLDGKRLYVt~SLys~WD~QFYPE~v 422 (476)
T KOG0918|consen 377 PEALYVKGRKLRGGPQMLQLSLDGKRLYVTNSLYSAWDRQFYPELV 422 (476)
T ss_pred CccceecCccccCCceeEEeccCCcEEEEEchhhhhhHhhhCHHHH
Confidence 9999999999999999999999999999999999999999999986
No 4
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=99.90 E-value=7.1e-24 Score=199.74 Aligned_cols=177 Identities=42% Similarity=0.716 Sum_probs=98.2
Q ss_pred CCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceEEEE--ccCCCEEEEEcCCC
Q psy11412 54 HGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQL--SLDGKRIYVSSSLF 131 (290)
Q Consensus 54 ~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vaf--sPdG~~lYv~nel~ 131 (290)
+.++++||+.. .+.++++.+|.. |..|-.+-| .|+..+-||...|.
T Consensus 221 G~~l~vWD~~~---r~~~Q~idLg~~-----------------------------g~~pLEvRflH~P~~~~gFvg~aLs 268 (461)
T PF05694_consen 221 GHSLHVWDWST---RKLLQTIDLGEE-----------------------------GQMPLEVRFLHDPDANYGFVGCALS 268 (461)
T ss_dssp --EEEEEETTT---TEEEEEEES-TT-----------------------------EEEEEEEEE-SSTT--EEEEEEE--
T ss_pred cCeEEEEECCC---CcEeeEEecCCC-----------------------------CCceEEEEecCCCCccceEEEEecc
Confidence 46899999965 567777777610 123444444 46678888888777
Q ss_pred CCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCC--------CCceeEEEEccCCCEEEEEeCCCCc
Q psy11412 132 SPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPA--------RSMVTDILISLDDRYLYTSNWMHGD 203 (290)
Q Consensus 132 ~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~--------~~~~~~i~~SpDGr~Lyvs~r~~~~ 203 (290)
+.+-.++..+ ++. |... .+.++|...+++|.+|+ ++.+.+|.+|.|.||||+|||+++.
T Consensus 269 s~i~~~~k~~---~g~----W~a~------kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~Gd 335 (461)
T PF05694_consen 269 SSIWRFYKDD---DGE----WAAE------KVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGD 335 (461)
T ss_dssp EEEEEEEE-E---TTE----EEEE------EEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTE
T ss_pred ceEEEEEEcC---CCC----eeee------EEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCc
Confidence 6654443322 232 2221 13335556677887765 3578999999999999999999999
Q ss_pred EEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEEEcCCCCCCCc
Q psy11412 204 IRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDK 283 (290)
Q Consensus 204 V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~~~~~~~~ 283 (290)
|+.|||+||.++++++++.+||.+.++ .+..++|.++.++|+|+.+|-|||||||+|++||+||+
T Consensus 336 vrqYDISDP~~Pkl~gqv~lGG~~~~~---------------~~~~v~g~~l~GgPqMvqlS~DGkRlYvTnSLys~WD~ 400 (461)
T PF05694_consen 336 VRQYDISDPFNPKLVGQVFLGGSIRKG---------------DHPVVKGKRLRGGPQMVQLSLDGKRLYVTNSLYSAWDK 400 (461)
T ss_dssp EEEEE-SSTTS-EEEEEEE-BTTTT-B-----------------TTS------S----EEE-TTSSEEEEE----HHHHH
T ss_pred EEEEecCCCCCCcEEeEEEECcEeccC---------------CCccccccccCCCCCeEEEccCCeEEEEEeeccccccc
Confidence 999999999999999999999965322 12345788888999999999999999999999999999
Q ss_pred ccCCCCC
Q psy11412 284 EIYPDLV 290 (290)
Q Consensus 284 ~~~~~~~ 290 (290)
||||+||
T Consensus 401 qfYP~~~ 407 (461)
T PF05694_consen 401 QFYPDGV 407 (461)
T ss_dssp HHSTT--
T ss_pred ccCCCcc
Confidence 9999986
No 5
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.88 E-value=3.4e-21 Score=179.04 Aligned_cols=167 Identities=17% Similarity=0.199 Sum_probs=116.9
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
..|++++++|||++|||++++++.|.+||+...+......... .....|.+|
T Consensus 126 ~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~----------------------------~~~~~g~~p 177 (330)
T PRK11028 126 EGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAE----------------------------VTTVEGAGP 177 (330)
T ss_pred CcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCc----------------------------eecCCCCCC
Confidence 3689999999999999999999999999996532221100000 001235789
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
+|++|+|||++|||+++..+.+.++.... ..+.+..++.. ..+|.. .+.+..+.+|+|+||||
T Consensus 178 ~~~~~~pdg~~lyv~~~~~~~v~v~~~~~---~~~~~~~~~~~--------~~~p~~------~~~~~~~~~i~~~pdg~ 240 (330)
T PRK11028 178 RHMVFHPNQQYAYCVNELNSSVDVWQLKD---PHGEIECVQTL--------DMMPAD------FSDTRWAADIHITPDGR 240 (330)
T ss_pred ceEEECCCCCEEEEEecCCCEEEEEEEeC---CCCCEEEEEEE--------ecCCCc------CCCCccceeEEECCCCC
Confidence 99999999999999999777665554321 11122211111 111110 11223567899999999
Q ss_pred EEEEEeCCCCcEEEEEecCCC-CceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEE
Q psy11412 193 YLYTSNWMHGDIRQYDIRDTA-HPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRI 271 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d~~-~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L 271 (290)
+||++++++++|.+|++...+ ..++++.+++|. .|+.|+|+|||++|
T Consensus 241 ~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~--------------------------------~p~~~~~~~dg~~l 288 (330)
T PRK11028 241 HLYACDRTASLISVFSVSEDGSVLSFEGHQPTET--------------------------------QPRGFNIDHSGKYL 288 (330)
T ss_pred EEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccc--------------------------------cCCceEECCCCCEE
Confidence 999999999999999995432 345677777754 79999999999999
Q ss_pred EEEcC
Q psy11412 272 YVSSS 276 (290)
Q Consensus 272 ~Van~ 276 (290)
||+|+
T Consensus 289 ~va~~ 293 (330)
T PRK11028 289 IAAGQ 293 (330)
T ss_pred EEEEc
Confidence 99997
No 6
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.83 E-value=6.8e-19 Score=165.52 Aligned_cols=179 Identities=20% Similarity=0.242 Sum_probs=116.4
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEe-ecccccCCCceEEecCCCCcCCCCcceeeccccC
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIF-LGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFT 109 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~-~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g 109 (290)
.+..||+++++|||++||++|+++|+|.+|++.+.+.+.....+. ..+. .+. . .+..+
T Consensus 85 ~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~-g~~--------~------------~rq~~ 143 (345)
T PF10282_consen 85 GGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGS-GPN--------P------------DRQEG 143 (345)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEE-ESS--------T------------TTTSS
T ss_pred CCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCC-CCc--------c------------ccccc
Confidence 456899999999999999999999999999998755444332211 1110 000 0 01124
Q ss_pred CCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEcc
Q psy11412 110 GSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISL 189 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~Sp 189 (290)
.+|+++.|+|||+++||++.....+..+.... ..+.+..... + .++.+..|++|+|+|
T Consensus 144 ~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~---~~~~l~~~~~--------~-----------~~~~G~GPRh~~f~p 201 (345)
T PF10282_consen 144 PHPHQVVFSPDGRFVYVPDLGADRVYVYDIDD---DTGKLTPVDS--------I-----------KVPPGSGPRHLAFSP 201 (345)
T ss_dssp TCEEEEEE-TTSSEEEEEETTTTEEEEEEE-T---TS-TEEEEEE--------E-----------ECSTTSSEEEEEE-T
T ss_pred ccceeEEECCCCCEEEEEecCCCEEEEEEEeC---CCceEEEeec--------c-----------ccccCCCCcEEEEcC
Confidence 68999999999999999876333222222211 1111111000 0 123456899999999
Q ss_pred CCCEEEEEeCCCCcEEEEEec-CCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCC
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIR-DTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDG 268 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~-d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG 268 (290)
||++||+.++.+++|.+|++. ..+..+.++.+++... .+.+. ..|.+++|||||
T Consensus 202 dg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~----------------------~~~~~---~~~~~i~ispdg 256 (345)
T PF10282_consen 202 DGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPE----------------------GFTGE---NAPAEIAISPDG 256 (345)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCET----------------------TSCSS---SSEEEEEE-TTS
T ss_pred CcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccc----------------------ccccc---CCceeEEEecCC
Confidence 999999999999999999997 3344556676665421 00111 268999999999
Q ss_pred CEEEEEcCC
Q psy11412 269 KRIYVSSSL 277 (290)
Q Consensus 269 ~~L~Van~~ 277 (290)
++|||+|+.
T Consensus 257 ~~lyvsnr~ 265 (345)
T PF10282_consen 257 RFLYVSNRG 265 (345)
T ss_dssp SEEEEEECT
T ss_pred CEEEEEecc
Confidence 999999984
No 7
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=99.82 E-value=1.5e-20 Score=177.28 Aligned_cols=139 Identities=55% Similarity=1.009 Sum_probs=84.8
Q ss_pred CeecCCCceeEEEEEecCCCccCCCCCCCCC-------CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeE
Q psy11412 1 FYRQSDGTYKADKVIDIPAKQVQGYPGGDKV-------PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQ 73 (290)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-------~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~ 73 (290)
|||+++|+|++.+||+|++++|..+. .+++ |+.+..|.+|.|+|+||++|+..|.|+.|||+|+.+|+++++
T Consensus 274 ~~k~~~g~W~a~kVi~ip~~~v~~~~-lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gq 352 (461)
T PF05694_consen 274 FYKDDDGEWAAEKVIDIPAKKVEGWI-LPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQ 352 (461)
T ss_dssp EEE-ETTEEEEEEEEEE--EE--SS----GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEE
T ss_pred EEEcCCCCeeeeEEEECCCcccCccc-ccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeE
Confidence 79999999999999999999999886 5555 889999999999999999999999999999999999999999
Q ss_pred EeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecce
Q psy11412 74 IFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDE 153 (290)
Q Consensus 74 i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~ 153 (290)
+.+||.+....+ ..+++.+..++|+||.+|.|||+|||+|+|-+.||..+|++..+++..+..++
T Consensus 353 v~lGG~~~~~~~---------------~~v~g~~l~GgPqMvqlS~DGkRlYvTnSLys~WD~qfYP~~~~~g~~m~~iD 417 (461)
T PF05694_consen 353 VFLGGSIRKGDH---------------PVVKGKRLRGGPQMVQLSLDGKRLYVTNSLYSAWDKQFYPDGVKNGSWMLKID 417 (461)
T ss_dssp EE-BTTTT-B-----------------TTS------S----EEE-TTSSEEEEE----HHHHHHHSTT------EEEEEE
T ss_pred EEECcEeccCCC---------------ccccccccCCCCCeEEEccCCeEEEEEeecccccccccCCCccccccEEEEEE
Confidence 999976532211 11233444579999999999999999999999999999998776777776666
Q ss_pred ee
Q psy11412 154 IM 155 (290)
Q Consensus 154 ~~ 155 (290)
+.
T Consensus 418 vd 419 (461)
T PF05694_consen 418 VD 419 (461)
T ss_dssp E-
T ss_pred ec
Confidence 54
No 8
>KOG0918|consensus
Probab=99.80 E-value=3.5e-19 Score=164.84 Aligned_cols=155 Identities=50% Similarity=0.941 Sum_probs=142.7
Q ss_pred CeecCCCceeEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccc
Q psy11412 1 FYRQSDGTYKADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKI 80 (290)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~ 80 (290)
|++.++.||.+.+||.++.++|..+. .+..|+....+.+|-|.|+||+++|-.|.|+.|||+|+-++++.+++.+||.+
T Consensus 281 ~~k~~~~tws~~~visvp~~kv~~w~-~~eMP~LITDilISmDDRFLYvs~WLHGDirQYdIsDP~n~kLtgQi~lGG~i 359 (476)
T KOG0918|consen 281 FFKNSDDTWSAEVVISVPPLKVENWI-LPEMPGLITDILISLDDRFLYVSNWLHGDIRQYDISDPKNPKLTGQIFLGGSI 359 (476)
T ss_pred eeeccccccceeEEEecCcccccccc-CcccchhhheeEEeecCcEEEEEeeeecceeeeccCCCCCcceEEEEEECcEe
Confidence 67888899999999999999999998 88899999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeee
Q psy11412 81 QSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIME 156 (290)
Q Consensus 81 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~ 156 (290)
...+++-+..++.+..++.+..+.+++..+||+|+.+|-|||+|||+|+|-+.||..|||+.++.|+.+.++|+.+
T Consensus 360 ~~~s~vkvl~~e~~~~~~ea~~vKGrkl~GGPQMlQLSLDGKRLYVt~SLys~WD~QFYPE~v~~G~~miqidvdt 435 (476)
T KOG0918|consen 360 QKGSPVKVLEEEGLKKQPEALYVKGRKLRGGPQMLQLSLDGKRLYVTNSLYSAWDRQFYPELVSKGSHMIQIDVDT 435 (476)
T ss_pred ecCCceEEeccccccCCCccceecCccccCCceeEEeccCCcEEEEEchhhhhhHhhhCHHHHhcCceEEEEeeec
Confidence 8888998888877777777777888888899999999999999999999999999999999888888888777754
No 9
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.79 E-value=7.1e-18 Score=156.74 Aligned_cols=158 Identities=18% Similarity=0.205 Sum_probs=106.6
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCC
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 110 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 110 (290)
..+.|..+++||||++||++++..+.|.+|++++.+....+..+.. +.
T Consensus 33 ~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~--------------------------------~~ 80 (330)
T PRK11028 33 VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPL--------------------------------PG 80 (330)
T ss_pred cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecC--------------------------------CC
Confidence 4457889999999999999998889999999974333333332211 24
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
.|.+++|+|+|++||+++...+. +..++... ...+.. ... .++....+..++|+||
T Consensus 81 ~p~~i~~~~~g~~l~v~~~~~~~---------------v~v~~~~~---~g~~~~-~~~-----~~~~~~~~~~~~~~p~ 136 (330)
T PRK11028 81 SPTHISTDHQGRFLFSASYNANC---------------VSVSPLDK---DGIPVA-PIQ-----IIEGLEGCHSANIDPD 136 (330)
T ss_pred CceEEEECCCCCEEEEEEcCCCe---------------EEEEEECC---CCCCCC-cee-----eccCCCcccEeEeCCC
Confidence 78999999999999999873332 22222210 000000 000 0112235678999999
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCceE----eeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEcc
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRDTAHPVL----VGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSL 266 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d~~~~~~----v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sP 266 (290)
|++||+++.+++.|.+||+...+.... ..+++. +.+|++++|+|
T Consensus 137 g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~--------------------------------g~~p~~~~~~p 184 (330)
T PRK11028 137 NRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE--------------------------------GAGPRHMVFHP 184 (330)
T ss_pred CCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCC--------------------------------CCCCceEEECC
Confidence 999999999999999999964221110 011112 23799999999
Q ss_pred CCCEEEEEcC
Q psy11412 267 DGKRIYVSSS 276 (290)
Q Consensus 267 DG~~L~Van~ 276 (290)
||++|||+|+
T Consensus 185 dg~~lyv~~~ 194 (330)
T PRK11028 185 NQQYAYCVNE 194 (330)
T ss_pred CCCEEEEEec
Confidence 9999999987
No 10
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.70 E-value=2.3e-15 Score=141.44 Aligned_cols=204 Identities=14% Similarity=0.093 Sum_probs=122.8
Q ss_pred EEEEEecCCCccCCCCCCCCCCCc--------eEEEEEcCCCCEEEEEeCC-CCeEEEEEcCCCCCceeeeEEeecccc-
Q psy11412 11 ADKVIDIPAKQVQGYPGGDKVPAM--------VTDILISLDDRYLYTSNWM-HGDIRQYDIRDTAHPVLVGQIFLGGKI- 80 (290)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~v~~~--------p~~va~SpDGr~Lyva~~~-~g~V~v~dv~d~~~~~~~~~i~~g~~~- 80 (290)
.-.|+|+.+.++...+ +++.. |..+++|||||+|||+|.. ++.|.++|+.. .+++.++.+++..
T Consensus 78 ~V~v~D~~t~~~~~~i---~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~---~kvv~ei~vp~~~~ 151 (352)
T TIGR02658 78 YVEVIDPQTHLPIADI---ELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEG---KAFVRMMDVPDCYH 151 (352)
T ss_pred EEEEEECccCcEEeEE---ccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCC---CcEEEEEeCCCCcE
Confidence 3568888888888766 55444 4499999999999999987 89999999864 5677777665321
Q ss_pred ----cCCCceEEecCCCCcC---------CCC--ccee-eccccCCCceEEEEcc-CCCEEEEEcCCCCCcceeeccccc
Q psy11412 81 ----QSDSGVTVIDDPELDK---------QPD--PVII-KGRRFTGSSQMFQLSL-DGKRIYVSSSLFSPWDKEIYPDLV 143 (290)
Q Consensus 81 ----~~~~~~~v~~~~~~~~---------~~~--~~~~-~~~~~g~gPr~vafsP-dG~~lYv~nel~~~~d~~~~~~~~ 143 (290)
++...+..+.|..+.. ... +.|- ...+....| .|++ ||+++|+++| +.+.......
T Consensus 152 vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP---~~~~~dg~~~~vs~e--G~V~~id~~~-- 224 (352)
T TIGR02658 152 IFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHP---AYSNKSGRLVWPTYT--GKIFQIDLSS-- 224 (352)
T ss_pred EEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCC---ceEcCCCcEEEEecC--CeEEEEecCC--
Confidence 1111122222221100 000 0000 001112445 5566 9999999988 3332221100
Q ss_pred CCC-ceeecceeeeeeecccccccCcc-ccCccccCCCCceeEEEEccCCCEEEEEe-C--------CCCcEEEEEecCC
Q psy11412 144 KTD-AAFGSDEIMEFIQRNEMRSMPLS-SLGSWKYPARSMVTDILISLDDRYLYTSN-W--------MHGDIRQYDIRDT 212 (290)
Q Consensus 144 ~~g-~~~~~~~~~~~~~~~~i~~~p~~-~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~-r--------~~~~V~v~Dv~d~ 212 (290)
++ .....+... ... ..++| .|++-++ ++++|||++|||+. . ..+.|+++|..
T Consensus 225 -~~~~~~~~~~~~-----------~~~~~~~~w-rP~g~q~--ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~-- 287 (352)
T TIGR02658 225 -GDAKFLPAIEAF-----------TEAEKADGW-RPGGWQQ--VAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAK-- 287 (352)
T ss_pred -Ccceecceeeec-----------ccccccccc-CCCccee--EEEcCCCCEEEEEecCCccccccCCCCEEEEEECC--
Confidence 00 000011111 000 01244 2322233 99999999999953 2 23689999874
Q ss_pred CCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCC-EEEEEcCC
Q psy11412 213 AHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGK-RIYVSSSL 277 (290)
Q Consensus 213 ~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~-~L~Van~~ 277 (290)
+.+.+.++++|. .|.+++|||||+ +||++|..
T Consensus 288 -t~kvi~~i~vG~--------------------------------~~~~iavS~Dgkp~lyvtn~~ 320 (352)
T TIGR02658 288 -TGKRLRKIELGH--------------------------------EIDSINVSQDAKPLLYALSTG 320 (352)
T ss_pred -CCeEEEEEeCCC--------------------------------ceeeEEECCCCCeEEEEeCCC
Confidence 478899999877 699999999999 99999973
No 11
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.67 E-value=1.6e-14 Score=132.59 Aligned_cols=205 Identities=13% Similarity=0.118 Sum_probs=127.1
Q ss_pred EEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCC--CCeEEEEEcCCC-CCceeeeEEeecccccCCCceEEec
Q psy11412 14 VIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWM--HGDIRQYDIRDT-AHPVLVGQIFLGGKIQSDSGVTVID 90 (290)
Q Consensus 14 ~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~--~g~V~v~dv~d~-~~~~~~~~i~~g~~~~~~~~~~v~~ 90 (290)
.+|.++++..... .+...+.|.-++++|++|+||+.+.. .|.|..|.+++. +++..+.....
T Consensus 22 ~ld~~~g~l~~~~-~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~-------------- 86 (346)
T COG2706 22 NLDTKTGELSLLQ-LVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTL-------------- 86 (346)
T ss_pred EEeCcccccchhh-hccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeecccc--------------
Confidence 3444455544444 44456799999999999999999876 789999999753 55555543222
Q ss_pred CCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeeccc-----------------------------
Q psy11412 91 DPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPD----------------------------- 141 (290)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~----------------------------- 141 (290)
.|..|-|++++++|++||++|=-.+.+.++-..+
T Consensus 87 -----------------~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~ 149 (346)
T COG2706 87 -----------------PGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHS 149 (346)
T ss_pred -----------------CCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccce
Confidence 2467899999999999999986444444431100
Q ss_pred --ccCCCceeecceeeeeeeccc-ccccCcccc---CccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCC-CC
Q psy11412 142 --LVKTDAAFGSDEIMEFIQRNE-MRSMPLSSL---GSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDT-AH 214 (290)
Q Consensus 142 --~~~~g~~~~~~~~~~~~~~~~-i~~~p~~~~---~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~-~~ 214 (290)
...++..+...|+- +.+. +-....+.. .-..++.+.+|++|+|+|+||++|+.++.+++|.||..... +.
T Consensus 150 a~~tP~~~~l~v~DLG---~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~ 226 (346)
T COG2706 150 ANFTPDGRYLVVPDLG---TDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGK 226 (346)
T ss_pred eeeCCCCCEEEEeecC---CceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCce
Confidence 00011111111110 0000 000000000 00012234579999999999999999999999999999653 34
Q ss_pred ceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEEEcCCC
Q psy11412 215 PVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLF 278 (290)
Q Consensus 215 ~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~~~ 278 (290)
.+.++.+.+- |+.+.|.+ +-..+.+|||||+|||+|+..
T Consensus 227 ~~~lQ~i~tl----------------------P~dF~g~~---~~aaIhis~dGrFLYasNRg~ 265 (346)
T COG2706 227 FEELQTIDTL----------------------PEDFTGTN---WAAAIHISPDGRFLYASNRGH 265 (346)
T ss_pred EEEeeeeccC----------------------ccccCCCC---ceeEEEECCCCCEEEEecCCC
Confidence 4456655442 12233443 567899999999999999943
No 12
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.64 E-value=8.8e-15 Score=139.01 Aligned_cols=173 Identities=22% Similarity=0.239 Sum_probs=113.1
Q ss_pred EEEEEecCCCccCCCCCCCCCCCceE-EEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEe
Q psy11412 11 ADKVIDIPAKQVQGYPGGDKVPAMVT-DILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVI 89 (290)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~v~~~p~-~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~ 89 (290)
.-.|||....++...+ +.+..+| .+.+|||||++||++. +|.|.+||+.. .+.++++.+|
T Consensus 17 ~v~viD~~t~~~~~~i---~~~~~~h~~~~~s~Dgr~~yv~~r-dg~vsviD~~~---~~~v~~i~~G------------ 77 (369)
T PF02239_consen 17 SVAVIDGATNKVVARI---PTGGAPHAGLKFSPDGRYLYVANR-DGTVSVIDLAT---GKVVATIKVG------------ 77 (369)
T ss_dssp EEEEEETTT-SEEEEE---E-STTEEEEEE-TT-SSEEEEEET-TSEEEEEETTS---SSEEEEEE-S------------
T ss_pred EEEEEECCCCeEEEEE---cCCCCceeEEEecCCCCEEEEEcC-CCeEEEEECCc---ccEEEEEecC------------
Confidence 4578999998888876 6655555 5789999999999996 78999999865 5577777665
Q ss_pred cCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCcc
Q psy11412 90 DDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLS 169 (290)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~ 169 (290)
..|+++++|+|||++|++|...+.+ .++|..+ .+.++.++..
T Consensus 78 --------------------~~~~~i~~s~DG~~~~v~n~~~~~v---------------~v~D~~t---le~v~~I~~~ 119 (369)
T PF02239_consen 78 --------------------GNPRGIAVSPDGKYVYVANYEPGTV---------------SVIDAET---LEPVKTIPTG 119 (369)
T ss_dssp --------------------SEEEEEEE--TTTEEEEEEEETTEE---------------EEEETTT-----EEEEEE--
T ss_pred --------------------CCcceEEEcCCCCEEEEEecCCCce---------------eEecccc---ccceeecccc
Confidence 5799999999999999998743333 2233222 2233333322
Q ss_pred ccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcce
Q psy11412 170 SLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVI 249 (290)
Q Consensus 170 ~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~ 249 (290)
..... . ..+.+++|..||+....+++....+.|.+.|..++ .+..+..+.+|.
T Consensus 120 ~~~~~-~-~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~-~~~~~~~i~~g~------------------------ 172 (369)
T PF02239_consen 120 GMPVD-G-PESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDP-KNLKVTTIKVGR------------------------ 172 (369)
T ss_dssp EE-TT-T-S---EEEEEE-SSSSEEEEEETTTTEEEEEETTTS-SCEEEEEEE--T------------------------
T ss_pred ccccc-c-cCCCceeEEecCCCCEEEEEEccCCeEEEEEeccc-cccceeeecccc------------------------
Confidence 11110 0 11356789999999987888877899999998775 334556666655
Q ss_pred eecccccCCcceEEEccCCCEEEEEc
Q psy11412 250 IKGRRFTGSSQMFQLSLDGKRIYVSS 275 (290)
Q Consensus 250 ~~~~~~~~~P~~~a~sPDG~~L~Van 275 (290)
.|+++.|+||||++++|+
T Consensus 173 --------~~~D~~~dpdgry~~va~ 190 (369)
T PF02239_consen 173 --------FPHDGGFDPDGRYFLVAA 190 (369)
T ss_dssp --------TEEEEEE-TTSSEEEEEE
T ss_pred --------cccccccCcccceeeecc
Confidence 799999999999999974
No 13
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.61 E-value=5.5e-14 Score=132.16 Aligned_cols=89 Identities=16% Similarity=0.107 Sum_probs=71.4
Q ss_pred eEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeC---------CCCeEEEEEcCCCCCceeeeEEeecccc
Q psy11412 10 KADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNW---------MHGDIRQYDIRDTAHPVLVGQIFLGGKI 80 (290)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~---------~~g~V~v~dv~d~~~~~~~~~i~~g~~~ 80 (290)
..--|||..+.++...+ +++..|+++ +||||++||+|+. .++.|.+||..+ .+.+.++.++..
T Consensus 27 ~~v~ViD~~~~~v~g~i---~~G~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t---~~~~~~i~~p~~- 98 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMT---DGGFLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQT---HLPIADIELPEG- 98 (352)
T ss_pred ceEEEEECCCCEEEEEE---EccCCCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECcc---CcEEeEEccCCC-
Confidence 45669999999998877 889999996 9999999999998 789999999854 666776666510
Q ss_pred cCCCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcC
Q psy11412 81 QSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 81 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~ne 129 (290)
|. .-.+..|..++||||||+|||.|+
T Consensus 99 -----------------p~------~~~~~~~~~~~ls~dgk~l~V~n~ 124 (352)
T TIGR02658 99 -----------------PR------FLVGTYPWMTSLTPDNKTLLFYQF 124 (352)
T ss_pred -----------------ch------hhccCccceEEECCCCCEEEEecC
Confidence 00 002357789999999999999997
No 14
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.53 E-value=1.6e-13 Score=130.36 Aligned_cols=217 Identities=20% Similarity=0.210 Sum_probs=115.8
Q ss_pred EEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeeccccc----------
Q psy11412 12 DKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQ---------- 81 (290)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~---------- 81 (290)
-.+||+...++...+ +++..|.++++|+|||+|||+|+..++|.++|..+ ++.+..+.+++...
T Consensus 60 vsviD~~~~~~v~~i---~~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~t---le~v~~I~~~~~~~~~~~~Rv~aI 133 (369)
T PF02239_consen 60 VSVIDLATGKVVATI---KVGGNPRGIAVSPDGKYVYVANYEPGTVSVIDAET---LEPVKTIPTGGMPVDGPESRVAAI 133 (369)
T ss_dssp EEEEETTSSSEEEEE---E-SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT-----EEEEEE--EE-TTTS---EEEE
T ss_pred EEEEECCcccEEEEE---ecCCCcceEEEcCCCCEEEEEecCCCceeEecccc---ccceeecccccccccccCCCceeE
Confidence 579999999999877 89999999999999999999999999999999754 55666665542211
Q ss_pred ---C-----------CCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCc
Q psy11412 82 ---S-----------DSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDA 147 (290)
Q Consensus 82 ---~-----------~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~ 147 (290)
+ .+.+++++... ..+........+..|+.+.|+|+||+++++....+.+.+.... .+.
T Consensus 134 v~s~~~~~fVv~lkd~~~I~vVdy~d----~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~----~~k 205 (369)
T PF02239_consen 134 VASPGRPEFVVNLKDTGEIWVVDYSD----PKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTK----TGK 205 (369)
T ss_dssp EE-SSSSEEEEEETTTTEEEEEETTT----SSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETT----TTE
T ss_pred EecCCCCEEEEEEccCCeEEEEEecc----ccccceeeecccccccccccCcccceeeecccccceeEEEeec----cce
Confidence 1 12223332111 1111122334567899999999999999975544433332110 011
Q ss_pred eeecceeeeeeeccc-------------------------ccccCcc--ccCccc----cCCCCceeEEEEccCCCEEEE
Q psy11412 148 AFGSDEIMEFIQRNE-------------------------MRSMPLS--SLGSWK----YPARSMVTDILISLDDRYLYT 196 (290)
Q Consensus 148 ~~~~~~~~~~~~~~~-------------------------i~~~p~~--~~~~~~----~~~~~~~~~i~~SpDGr~Lyv 196 (290)
.+..++.-....+.. +..-+.. ....|. ++..+.+.-|..|||+++||+
T Consensus 206 ~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwv 285 (369)
T PF02239_consen 206 LVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWV 285 (369)
T ss_dssp EEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEE
T ss_pred EEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEe
Confidence 111111000000000 0000000 001111 112233466889999999999
Q ss_pred E---eCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEE
Q psy11412 197 S---NWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYV 273 (290)
Q Consensus 197 s---~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~V 273 (290)
. +..+++|.|+|..+ ++.+.++..+. +..+-++.|++||+++|+
T Consensus 286 d~~~~~~~~~v~viD~~t---l~~~~~i~~~~------------------------------~~~~~h~ef~~dG~~v~v 332 (369)
T PF02239_consen 286 DTFLNPDADTVQVIDKKT---LKVVKTITPGP------------------------------GKRVVHMEFNPDGKEVWV 332 (369)
T ss_dssp E-TT-SSHT-EEEEECCG---TEEEE-HHHHH------------------------------T--EEEEEE-TTSSEEEE
T ss_pred eccCCCCCceEEEEECcC---cceeEEEeccC------------------------------CCcEeccEECCCCCEEEE
Confidence 9 55678999999864 45555554332 114789999999999999
Q ss_pred Ec
Q psy11412 274 SS 275 (290)
Q Consensus 274 an 275 (290)
+.
T Consensus 333 S~ 334 (369)
T PF02239_consen 333 SV 334 (369)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 15
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.53 E-value=1.7e-12 Score=116.34 Aligned_cols=180 Identities=14% Similarity=0.196 Sum_probs=111.2
Q ss_pred EEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEec
Q psy11412 11 ADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVID 90 (290)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~ 90 (290)
.-.++|+...+..... +.+..+.+++++|||++++++......+..||..+ .+.+..+..
T Consensus 96 ~l~~~d~~~~~~~~~~---~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~---~~~~~~~~~-------------- 155 (300)
T TIGR03866 96 LVTVIDIETRKVLAEI---PVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKT---YEIVDNVLV-------------- 155 (300)
T ss_pred eEEEEECCCCeEEeEe---eCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCC---CeEEEEEEc--------------
Confidence 3556677665544433 33446789999999999998876555677788653 233222211
Q ss_pred CCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccc
Q psy11412 91 DPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSS 170 (290)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~ 170 (290)
+..|++++|+|||++||+++...+ .+..++... .+.+..+...
T Consensus 156 ------------------~~~~~~~~~s~dg~~l~~~~~~~~---------------~v~i~d~~~---~~~~~~~~~~- 198 (300)
T TIGR03866 156 ------------------DQRPRFAEFTADGKELWVSSEIGG---------------TVSVIDVAT---RKVIKKITFE- 198 (300)
T ss_pred ------------------CCCccEEEECCCCCEEEEEcCCCC---------------EEEEEEcCc---ceeeeeeeec-
Confidence 146788999999999998765222 233333322 1111111000
Q ss_pred cCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCccee
Q psy11412 171 LGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVII 250 (290)
Q Consensus 171 ~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~ 250 (290)
..+ ..+....+.++++||||+++|++...+++|.+||+.+ .+.+..+..+.
T Consensus 199 ~~~-~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~---~~~~~~~~~~~------------------------- 249 (300)
T TIGR03866 199 IPG-VHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKT---YEVLDYLLVGQ------------------------- 249 (300)
T ss_pred ccc-cccccCCccceEECCCCCEEEEEcCCCCeEEEEECCC---CcEEEEEEeCC-------------------------
Confidence 000 0011124567999999999999887788999999843 34444443333
Q ss_pred ecccccCCcceEEEccCCCEEEEEcC---CCCCCCc
Q psy11412 251 KGRRFTGSSQMFQLSLDGKRIYVSSS---LFSPWDK 283 (290)
Q Consensus 251 ~~~~~~~~P~~~a~sPDG~~L~Van~---~~~~~~~ 283 (290)
.+..++|+|||++||+++. .+..||.
T Consensus 250 -------~~~~~~~~~~g~~l~~~~~~~~~i~v~d~ 278 (300)
T TIGR03866 250 -------RVWQLAFTPDEKYLLTTNGVSNDVSVIDV 278 (300)
T ss_pred -------CcceEEECCCCCEEEEEcCCCCeEEEEEC
Confidence 5788999999999999864 4455553
No 16
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.49 E-value=3.1e-12 Score=114.69 Aligned_cols=165 Identities=19% Similarity=0.274 Sum_probs=106.3
Q ss_pred EEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEec
Q psy11412 11 ADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVID 90 (290)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~ 90 (290)
.-.++|+...+..... .....+.+++++|||++||+++..++.|.+||.... +.+..+..
T Consensus 12 ~v~~~d~~t~~~~~~~---~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~---~~~~~~~~-------------- 71 (300)
T TIGR03866 12 TISVIDTATLEVTRTF---PVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLATG---EVIGTLPS-------------- 71 (300)
T ss_pred EEEEEECCCCceEEEE---ECCCCCCceEECCCCCEEEEEECCCCeEEEEECCCC---cEEEeccC--------------
Confidence 3455677665544433 334457889999999999988877899999998642 22222211
Q ss_pred CCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccc
Q psy11412 91 DPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSS 170 (290)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~ 170 (290)
+..+..++|+|+|+.+|++++. ++.+..++... .+.+..+
T Consensus 72 ------------------~~~~~~~~~~~~g~~l~~~~~~---------------~~~l~~~d~~~---~~~~~~~---- 111 (300)
T TIGR03866 72 ------------------GPDPELFALHPNGKILYIANED---------------DNLVTVIDIET---RKVLAEI---- 111 (300)
T ss_pred ------------------CCCccEEEECCCCCEEEEEcCC---------------CCeEEEEECCC---CeEEeEe----
Confidence 1357789999999999998752 12333333322 1112211
Q ss_pred cCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCccee
Q psy11412 171 LGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVII 250 (290)
Q Consensus 171 ~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~ 250 (290)
+.+..+.+++++|||++|+++....+.+.+||... ...+..+..+.
T Consensus 112 ------~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~---~~~~~~~~~~~------------------------- 157 (300)
T TIGR03866 112 ------PVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKT---YEIVDNVLVDQ------------------------- 157 (300)
T ss_pred ------eCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCC---CeEEEEEEcCC-------------------------
Confidence 11123567999999999998885556677787642 33333333332
Q ss_pred ecccccCCcceEEEccCCCEEEEEcC
Q psy11412 251 KGRRFTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 251 ~~~~~~~~P~~~a~sPDG~~L~Van~ 276 (290)
.|+.++|+|||++|++++.
T Consensus 158 -------~~~~~~~s~dg~~l~~~~~ 176 (300)
T TIGR03866 158 -------RPRFAEFTADGKELWVSSE 176 (300)
T ss_pred -------CccEEEECCCCCEEEEEcC
Confidence 5888999999999988753
No 17
>PRK02888 nitrous-oxide reductase; Validated
Probab=99.48 E-value=6.5e-13 Score=131.34 Aligned_cols=212 Identities=11% Similarity=0.066 Sum_probs=130.1
Q ss_pred eEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeC---CCCeEEEEEcCCCCCceeeeEEeecc--ccc---
Q psy11412 10 KADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNW---MHGDIRQYDIRDTAHPVLVGQIFLGG--KIQ--- 81 (290)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~---~~g~V~v~dv~d~~~~~~~~~i~~g~--~~~--- 81 (290)
..--+||....+|...+ .|++.|..++++|||+++|++++ .+.++...+..+.. .. -.+...+ .+.
T Consensus 215 ~~vSvID~etmeV~~qV---~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d--~~-vvfni~~iea~vkdG 288 (635)
T PRK02888 215 SLFTAVDAETMEVAWQV---MVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERD--WV-VVFNIARIEEAVKAG 288 (635)
T ss_pred EEEEEEECccceEEEEE---EeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCc--eE-EEEchHHHHHhhhCC
Confidence 44568899988888876 88999999999999999999984 34556666553311 11 0010000 000
Q ss_pred -----CCCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccC--CCceeeccee
Q psy11412 82 -----SDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVK--TDAAFGSDEI 154 (290)
Q Consensus 82 -----~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~--~g~~~~~~~~ 154 (290)
..++|.|++-..-. ........-.+.|..|+++.+||||+++|++|.+++++++........ ++ . ++.
T Consensus 289 K~~~V~gn~V~VID~~t~~-~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~-~---~~~ 363 (635)
T PRK02888 289 KFKTIGGSKVPVVDGRKAA-NAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDG-K---IKP 363 (635)
T ss_pred CEEEECCCEEEEEECCccc-cCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhc-c---CCc
Confidence 13456777644300 000011223446789999999999999999999888777654321000 00 0 010
Q ss_pred eeeeecccccccCccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCC-----C--CceEeeEEeeCcee
Q psy11412 155 MEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDT-----A--HPVLVGQIFLGGKI 227 (290)
Q Consensus 155 ~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~-----~--~~~~v~~i~~Gg~~ 227 (290)
.+ ..++. ...+-.|.+.+|+++|. +|+|.+.+++|..|++... + ...+++.+++.-
T Consensus 364 ~~----~vvae----------vevGlGPLHTaFDg~G~-aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y-- 426 (635)
T PRK02888 364 RD----AVVAE----------PELGLGPLHTAFDGRGN-AYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHY-- 426 (635)
T ss_pred cc----eEEEe----------eccCCCcceEEECCCCC-EEEeEeecceeEEEehHHHHHHhccccCCcceecccCCC--
Confidence 00 01111 11234678899999996 8999999999999999641 0 023455555543
Q ss_pred cCCCceEEecCCCCCCCCCcceeecccccCCcceEEE------ccCCCEEEEEcCCCC
Q psy11412 228 QSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQL------SLDGKRIYVSSSLFS 279 (290)
Q Consensus 228 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~------sPDG~~L~Van~~~~ 279 (290)
+|-++.- .||||+|++.|.+.+
T Consensus 427 ------------------------------~pgh~~~~~g~t~~~dgk~l~~~nk~sk 454 (635)
T PRK02888 427 ------------------------------QPGHNHASMGETKEADGKWLVSLNKFSK 454 (635)
T ss_pred ------------------------------ccceeeecCCCcCCCCCCEEEEcccccc
Confidence 2434444 899999999998554
No 18
>PRK02888 nitrous-oxide reductase; Validated
Probab=99.42 E-value=8.1e-12 Score=123.63 Aligned_cols=191 Identities=16% Similarity=0.155 Sum_probs=126.1
Q ss_pred CceeEEEEEecCCCccCCCCCCCCCCC--ce-----EEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeeccc
Q psy11412 7 GTYKADKVIDIPAKQVQGYPGGDKVPA--MV-----TDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGK 79 (290)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~v~~--~p-----~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~ 79 (290)
-+++-+++|.||-.+-.+-.-..+.+. ++ +.+=++|||+.|++.....+.++++|.+ ..+++.++.++
T Consensus 160 ~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSvID~e---tmeV~~qV~Vd-- 234 (635)
T PRK02888 160 DVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTAVDAE---TMEVAWQVMVD-- 234 (635)
T ss_pred ccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEEEECc---cceEEEEEEeC--
Confidence 578889999999766666542222322 22 2466899999999887778999999865 46677777665
Q ss_pred ccCCCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEc---CCCCCccee----------e-cc---cc
Q psy11412 80 IQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSS---SLFSPWDKE----------I-YP---DL 142 (290)
Q Consensus 80 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~n---el~~~~d~~----------~-~~---~~ 142 (290)
..|++++++|||+++|+++ |.+.++... + .. +.
T Consensus 235 ------------------------------gnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~ 284 (635)
T PRK02888 235 ------------------------------GNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEA 284 (635)
T ss_pred ------------------------------CCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHh
Confidence 5789999999999999996 544332221 1 00 11
Q ss_pred cCCC-------ceeecceeeee--eecccccccCccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCC
Q psy11412 143 VKTD-------AAFGSDEIMEF--IQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTA 213 (290)
Q Consensus 143 ~~~g-------~~~~~~~~~~~--~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~ 213 (290)
.++| +.+.++|...- .....+. .+|.+..|.+|.+||||+++|++|..+++|+|+|+..-.
T Consensus 285 vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~----------yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k 354 (635)
T PRK02888 285 VKAGKFKTIGGSKVPVVDGRKAANAGSALTR----------YVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLD 354 (635)
T ss_pred hhCCCEEEECCCEEEEEECCccccCCcceEE----------EEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhh
Confidence 1223 22322222110 0011122 244566788999999999999999999999999996421
Q ss_pred C---------ceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEEEc
Q psy11412 214 H---------PVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSS 275 (290)
Q Consensus 214 ~---------~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van 275 (290)
. ..+++++++|- +|.+.+|+++|+ +|++-
T Consensus 355 ~~~~~~~~~~~~vvaevevGl--------------------------------GPLHTaFDg~G~-aytsl 392 (635)
T PRK02888 355 DLFDGKIKPRDAVVAEPELGL--------------------------------GPLHTAFDGRGN-AYTTL 392 (635)
T ss_pred hhhhccCCccceEEEeeccCC--------------------------------CcceEEECCCCC-EEEeE
Confidence 1 12456665544 899999999997 77763
No 19
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=99.38 E-value=4e-11 Score=114.51 Aligned_cols=175 Identities=18% Similarity=0.200 Sum_probs=119.8
Q ss_pred ceeEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeC--CCCeEEEEEcCCCCCceeeeEEeecccccCCCc
Q psy11412 8 TYKADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNW--MHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSG 85 (290)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~--~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~ 85 (290)
....-.|||++...+.... .++..|++++++|+|+++||++. .+++|.++|-. ..+++..+..|
T Consensus 94 ~~~~v~vid~~~~~~~~~~---~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~---t~~~~~~~~vG-------- 159 (381)
T COG3391 94 DSNTVSVIDTATNTVLGSI---PVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAA---TNKVTATIPVG-------- 159 (381)
T ss_pred CCCeEEEEcCcccceeeEe---eeccCCceEEECCCCCEEEEEecccCCceEEEEeCC---CCeEEEEEecC--------
Confidence 3667789998888877776 77779999999999999999998 46888888753 34555444443
Q ss_pred eEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccc
Q psy11412 86 VTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRS 165 (290)
Q Consensus 86 ~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~ 165 (290)
..|.+++++|+|..+|++++..+.+.. ++... ....+.
T Consensus 160 ------------------------~~P~~~a~~p~g~~vyv~~~~~~~v~v---------------i~~~~---~~v~~~ 197 (381)
T COG3391 160 ------------------------NTPTGVAVDPDGNKVYVTNSDDNTVSV---------------IDTSG---NSVVRG 197 (381)
T ss_pred ------------------------CCcceEEECCCCCeEEEEecCCCeEEE---------------EeCCC---cceecc
Confidence 467889999999999999863333322 22111 000100
Q ss_pred cCccccCccccCCCCceeEEEEccCCCEEEEEeCCC--CcEEEEEecCCCCceEeeE-EeeCceecCCCceEEecCCCCC
Q psy11412 166 MPLSSLGSWKYPARSMVTDILISLDDRYLYTSNWMH--GDIRQYDIRDTAHPVLVGQ-IFLGGKIQSDSGVTVIDDPELD 242 (290)
Q Consensus 166 ~p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~--~~V~v~Dv~d~~~~~~v~~-i~~Gg~~~~~~~v~~~~~~~~~ 242 (290)
.+.. ..+....|..++++|||.++|+++..+ ++|.++|... ...... .+.+.
T Consensus 198 ~~~~-----~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~---~~v~~~~~~~~~----------------- 252 (381)
T COG3391 198 SVGS-----LVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTAT---GNVTATDLPVGS----------------- 252 (381)
T ss_pred cccc-----ccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCC---ceEEEecccccc-----------------
Confidence 0000 012235678899999999999999776 5788777642 233332 22222
Q ss_pred CCCCcceeecccccCCcceEEEccCCCEEEEEcCC
Q psy11412 243 KQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSL 277 (290)
Q Consensus 243 ~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~~ 277 (290)
. .|.+++++|+|+.+||++..
T Consensus 253 -------------~-~~~~v~~~p~g~~~yv~~~~ 273 (381)
T COG3391 253 -------------G-APRGVAVDPAGKAAYVANSQ 273 (381)
T ss_pred -------------C-CCCceeECCCCCEEEEEecC
Confidence 1 58999999999999999663
No 20
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=99.29 E-value=1.3e-10 Score=111.08 Aligned_cols=156 Identities=15% Similarity=0.186 Sum_probs=106.4
Q ss_pred CCC-CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeecccc
Q psy11412 30 KVP-AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRF 108 (290)
Q Consensus 30 ~v~-~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 108 (290)
.++ ..|.+++++++|..+|+.+...+.|.++|... .+....+..
T Consensus 70 ~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~---~~~~~~~~v-------------------------------- 114 (381)
T COG3391 70 SVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTAT---NTVLGSIPV-------------------------------- 114 (381)
T ss_pred cCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcc---cceeeEeee--------------------------------
Confidence 344 68899999999999999998889999999543 333433333
Q ss_pred CCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEc
Q psy11412 109 TGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILIS 188 (290)
Q Consensus 109 g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~S 188 (290)
|..|++++++|+|+.+||++... ....+..++.. ....++.++ .+..|.+++++
T Consensus 115 G~~P~~~~~~~~~~~vYV~n~~~-------------~~~~vsvid~~---t~~~~~~~~----------vG~~P~~~a~~ 168 (381)
T COG3391 115 GLGPVGLAVDPDGKYVYVANAGN-------------GNNTVSVIDAA---TNKVTATIP----------VGNTPTGVAVD 168 (381)
T ss_pred ccCCceEEECCCCCEEEEEeccc-------------CCceEEEEeCC---CCeEEEEEe----------cCCCcceEEEC
Confidence 35899999999999999998721 01122222221 122233222 22345789999
Q ss_pred cCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCC
Q psy11412 189 LDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDG 268 (290)
Q Consensus 189 pDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG 268 (290)
|||.++|+++..++.|+++|... ..... ...+. ....+..|+.++++|||
T Consensus 169 p~g~~vyv~~~~~~~v~vi~~~~---~~v~~--~~~~~-------------------------~~~~~~~P~~i~v~~~g 218 (381)
T COG3391 169 PDGNKVYVTNSDDNTVSVIDTSG---NSVVR--GSVGS-------------------------LVGVGTGPAGIAVDPDG 218 (381)
T ss_pred CCCCeEEEEecCCCeEEEEeCCC---cceec--ccccc-------------------------ccccCCCCceEEECCCC
Confidence 99999999998899999998532 22221 11110 01112379999999999
Q ss_pred CEEEEEcC
Q psy11412 269 KRIYVSSS 276 (290)
Q Consensus 269 ~~L~Van~ 276 (290)
+++||+|.
T Consensus 219 ~~~yV~~~ 226 (381)
T COG3391 219 NRVYVAND 226 (381)
T ss_pred CEEEEEec
Confidence 99999987
No 21
>KOG0315|consensus
Probab=99.21 E-value=2.4e-09 Score=94.67 Aligned_cols=209 Identities=18% Similarity=0.238 Sum_probs=124.3
Q ss_pred CceeEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceee------eEEeecc--
Q psy11412 7 GTYKADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLV------GQIFLGG-- 78 (290)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~------~~i~~g~-- 78 (290)
+.||.-+..|+....-.-..--.-....+..|.|--|||+.|+++ .+|++++||++.+.-.+.. ..+-+..
T Consensus 58 a~~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgs-eDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQ 136 (311)
T KOG0315|consen 58 AGNQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGS-EDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQ 136 (311)
T ss_pred ccCCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecC-CCceEEEEeccCcccchhccCCCCcceEEecCCc
Confidence 678999999998654211100001235788999999999999876 4899999999764332221 1111110
Q ss_pred --cc--cCCCceEEecCCCC----cCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceee
Q psy11412 79 --KI--QSDSGVTVIDDPEL----DKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFG 150 (290)
Q Consensus 79 --~~--~~~~~~~v~~~~~~----~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~ 150 (290)
.+ ...++|.+-+..+. +..|.. ....+.++..|||+.|..+|..++ ..
T Consensus 137 teLis~dqsg~irvWDl~~~~c~~~liPe~--------~~~i~sl~v~~dgsml~a~nnkG~----------------cy 192 (311)
T KOG0315|consen 137 TELISGDQSGNIRVWDLGENSCTHELIPED--------DTSIQSLTVMPDGSMLAAANNKGN----------------CY 192 (311)
T ss_pred ceEEeecCCCcEEEEEccCCccccccCCCC--------CcceeeEEEcCCCcEEEEecCCcc----------------EE
Confidence 00 12345554443321 122221 246788999999999998886332 22
Q ss_pred cceeeeeeecccccc-cCccccCccccCC-CCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceec
Q psy11412 151 SDEIMEFIQRNEMRS-MPLSSLGSWKYPA-RSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQ 228 (290)
Q Consensus 151 ~~~~~~~~~~~~i~~-~p~~~~~~~~~~~-~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~ 228 (290)
.|+... .+.... .|... +.. ......+.||||+++|.++. .+.++.||.+.+- .++ ...-.|++
T Consensus 193 vW~l~~---~~~~s~l~P~~k-----~~ah~~~il~C~lSPd~k~lat~s-sdktv~iwn~~~~--~kl-e~~l~gh~-- 258 (311)
T KOG0315|consen 193 VWRLLN---HQTASELEPVHK-----FQAHNGHILRCLLSPDVKYLATCS-SDKTVKIWNTDDF--FKL-ELVLTGHQ-- 258 (311)
T ss_pred EEEccC---CCccccceEhhh-----eecccceEEEEEECCCCcEEEeec-CCceEEEEecCCc--eee-EEEeecCC--
Confidence 222211 000000 01100 111 24566789999999999887 7889999998652 122 22223331
Q ss_pred CCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEEEcC--CCCCCC
Q psy11412 229 SDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSS--LFSPWD 282 (290)
Q Consensus 229 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~--~~~~~~ 282 (290)
++.++-+||-||++|+.|.+ +-..|+
T Consensus 259 ----------------------------rWvWdc~FS~dg~YlvTassd~~~rlW~ 286 (311)
T KOG0315|consen 259 ----------------------------RWVWDCAFSADGEYLVTASSDHTARLWD 286 (311)
T ss_pred ----------------------------ceEEeeeeccCccEEEecCCCCceeecc
Confidence 27899999999999999976 445555
No 22
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.16 E-value=2.6e-09 Score=95.31 Aligned_cols=149 Identities=21% Similarity=0.325 Sum_probs=92.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCC--------CeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeec
Q psy11412 34 MVTDILISLDDRYLYTSNWMH--------GDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKG 105 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~--------g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 105 (290)
.|+.++++|||+ ||+++... |.|..++.. +....+ ..+
T Consensus 87 ~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~--~~~~~~---~~~---------------------------- 132 (246)
T PF08450_consen 87 RPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD--GKVTVV---ADG---------------------------- 132 (246)
T ss_dssp EEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT--SEEEEE---EEE----------------------------
T ss_pred CCceEEEcCCCC-EEEEecCCCccccccccceEEECCC--CeEEEE---ecC----------------------------
Confidence 789999999999 78876543 445555432 211111 111
Q ss_pred cccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCC-CceeE
Q psy11412 106 RRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPAR-SMVTD 184 (290)
Q Consensus 106 ~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~~~~~ 184 (290)
-..|.+|+|+|||++||+++.....+-.+.+.. .+..+.. ++.... .+.. ..|-+
T Consensus 133 ---~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~---~~~~~~~--------~~~~~~----------~~~~~g~pDG 188 (246)
T PF08450_consen 133 ---LGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDA---DGGELSN--------RRVFID----------FPGGPGYPDG 188 (246)
T ss_dssp ---ESSEEEEEEETTSSEEEEEETTTTEEEEEEEET---TTCCEEE--------EEEEEE-----------SSSSCEEEE
T ss_pred ---cccccceEECCcchheeecccccceeEEEeccc---cccceee--------eeeEEE----------cCCCCcCCCc
Confidence 157999999999999999887544333322211 1111110 011111 1111 34778
Q ss_pred EEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEE
Q psy11412 185 ILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQL 264 (290)
Q Consensus 185 i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~ 264 (290)
++++++|+ ||++.++.+.|.+||-. .+++..|.+... .|-+++|
T Consensus 189 ~~vD~~G~-l~va~~~~~~I~~~~p~----G~~~~~i~~p~~-------------------------------~~t~~~f 232 (246)
T PF08450_consen 189 LAVDSDGN-LWVADWGGGRIVVFDPD----GKLLREIELPVP-------------------------------RPTNCAF 232 (246)
T ss_dssp EEEBTTS--EEEEEETTTEEEEEETT----SCEEEEEE-SSS-------------------------------SEEEEEE
T ss_pred ceEcCCCC-EEEEEcCCCEEEEECCC----ccEEEEEcCCCC-------------------------------CEEEEEE
Confidence 99999996 79999999999999753 467777776642 7999999
Q ss_pred -ccCCCEEEEEcC
Q psy11412 265 -SLDGKRIYVSSS 276 (290)
Q Consensus 265 -sPDG~~L~Van~ 276 (290)
.||+++|||+.+
T Consensus 233 gg~~~~~L~vTta 245 (246)
T PF08450_consen 233 GGPDGKTLYVTTA 245 (246)
T ss_dssp ESTTSSEEEEEEB
T ss_pred ECCCCCEEEEEeC
Confidence 699999999864
No 23
>KOG0315|consensus
Probab=99.03 E-value=5.4e-09 Score=92.47 Aligned_cols=147 Identities=18% Similarity=0.286 Sum_probs=98.9
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
+.+..+.++||++.|+++++ -.|++||+.. .++..+.++... ...+
T Consensus 41 sqVNrLeiTpdk~~LAaa~~--qhvRlyD~~S-~np~Pv~t~e~h-------------------------------~kNV 86 (311)
T KOG0315|consen 41 SQVNRLEITPDKKDLAAAGN--QHVRLYDLNS-NNPNPVATFEGH-------------------------------TKNV 86 (311)
T ss_pred cceeeEEEcCCcchhhhccC--CeeEEEEccC-CCCCceeEEecc-------------------------------CCce
Confidence 36788999999999998876 5899999976 334344333221 1456
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
..+.|.-|||++|..+| || ++.+||...+.-.+. +.....+..|.++|+-.
T Consensus 87 taVgF~~dgrWMyTgse---------------Dg-t~kIWdlR~~~~qR~-------------~~~~spVn~vvlhpnQt 137 (311)
T KOG0315|consen 87 TAVGFQCDGRWMYTGSE---------------DG-TVKIWDLRSLSCQRN-------------YQHNSPVNTVVLHPNQT 137 (311)
T ss_pred EEEEEeecCeEEEecCC---------------Cc-eEEEEeccCcccchh-------------ccCCCCcceEEecCCcc
Confidence 77999999999998777 33 555566543111111 11123466799999999
Q ss_pred EEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEE
Q psy11412 193 YLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIY 272 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~ 272 (290)
.|++++ .++.|.|||+..-.-... .+.. ++ -..+.+++.|||+.|.
T Consensus 138 eLis~d-qsg~irvWDl~~~~c~~~----liPe----~~-------------------------~~i~sl~v~~dgsml~ 183 (311)
T KOG0315|consen 138 ELISGD-QSGNIRVWDLGENSCTHE----LIPE----DD-------------------------TSIQSLTVMPDGSMLA 183 (311)
T ss_pred eEEeec-CCCcEEEEEccCCccccc----cCCC----CC-------------------------cceeeEEEcCCCcEEE
Confidence 999998 588999999953111110 1111 00 0357899999999999
Q ss_pred EEcC
Q psy11412 273 VSSS 276 (290)
Q Consensus 273 Van~ 276 (290)
++|.
T Consensus 184 a~nn 187 (311)
T KOG0315|consen 184 AANN 187 (311)
T ss_pred EecC
Confidence 9988
No 24
>KOG2096|consensus
Probab=98.99 E-value=1.1e-08 Score=93.30 Aligned_cols=223 Identities=21% Similarity=0.235 Sum_probs=115.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+.+++||.||++|++++ ++++|++|++.|-...+ -..+. +.... ..|.
T Consensus 88 ~vt~~~FsSdGK~lat~~-~Dr~Ir~w~~~DF~~~e-Hr~~R----------------------------~nve~-dhpT 136 (420)
T KOG2096|consen 88 EVTDVAFSSDGKKLATIS-GDRSIRLWDVRDFENKE-HRCIR----------------------------QNVEY-DHPT 136 (420)
T ss_pred ceeeeEEcCCCceeEEEe-CCceEEEEecchhhhhh-hhHhh----------------------------ccccC-CCce
Confidence 678999999999998776 58999999998732111 00000 00111 4788
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCc---eeecceeeeeeecc--------------cccccC-ccccCccc
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDA---AFGSDEIMEFIQRN--------------EMRSMP-LSSLGSWK 175 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~---~~~~~~~~~~~~~~--------------~i~~~p-~~~~~~~~ 175 (290)
-++|+||-+-+.|.-.-++.+-++.... ..+|+ ....+|-..|.... .+.+.. ...+-.|.
T Consensus 137 ~V~FapDc~s~vv~~~~g~~l~vyk~~K-~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~ 215 (420)
T KOG2096|consen 137 RVVFAPDCKSVVVSVKRGNKLCVYKLVK-KTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWD 215 (420)
T ss_pred EEEECCCcceEEEEEccCCEEEEEEeee-cccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEe
Confidence 8999999877766543223222221000 00110 00011100010000 000000 00111232
Q ss_pred cCCC---------CceeEEEEccCCCEEEEEeCCCCcEEEEEec--CCCCceEeeEE-e-eCc-----------------
Q psy11412 176 YPAR---------SMVTDILISLDDRYLYTSNWMHGDIRQYDIR--DTAHPVLVGQI-F-LGG----------------- 225 (290)
Q Consensus 176 ~~~~---------~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~--d~~~~~~v~~i-~-~Gg----------------- 225 (290)
+.+. ..-++.++||||||+.++.+.- .|.||.+. ..+....+.++ . -|.
T Consensus 216 lkGq~L~~idtnq~~n~~aavSP~GRFia~~gFTp-DVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~v 294 (420)
T KOG2096|consen 216 LKGQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTP-DVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAV 294 (420)
T ss_pred cCCceeeeeccccccccceeeCCCCcEEEEecCCC-CceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeE
Confidence 2211 1346789999999999999654 58999883 11221111110 0 011
Q ss_pred eecCCCceEEecCCCCC-CCCCcceeecc-----cccCCcceEEEccCCCEEEEEcC----CCCCCCcccCCCC
Q psy11412 226 KIQSDSGVTVIDDPELD-KQPDPVIIKGR-----RFTGSSQMFQLSLDGKRIYVSSS----LFSPWDKEIYPDL 289 (290)
Q Consensus 226 ~~~~~~~v~~~~~~~~~-~~~~~~~~~~~-----~~~~~P~~~a~sPDG~~L~Van~----~~~~~~~~~~~~~ 289 (290)
.+++||+.++||.+-.= .--+|..++-. -.|+.|-.+.|||.|+.|+++.. .|...+-+-||++
T Consensus 295 tvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~ 368 (420)
T KOG2096|consen 295 TVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPEL 368 (420)
T ss_pred EEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhH
Confidence 13889999999843210 01111111111 11456889999999999999976 4556666666654
No 25
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.99 E-value=1.7e-08 Score=107.69 Aligned_cols=194 Identities=13% Similarity=0.072 Sum_probs=102.2
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
..|++++|+|++..||+++.+.+.|++||..+.. ... + .|...... .+.. .. .......|
T Consensus 683 n~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~-v~~---~-~G~G~~~~------~~g~---~~------~~~~~~~P 742 (1057)
T PLN02919 683 NSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGV-TRV---F-SGDGYERN------LNGS---SG------TSTSFAQP 742 (1057)
T ss_pred CCCeEEEEecCCCeEEEEECCCCeEEEEECCCCe-EEE---E-ecCCcccc------CCCC---cc------ccccccCc
Confidence 3789999999999999999999999999986521 111 1 11100000 0000 00 00012579
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCcc-ccCCCCceeEEEEccCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSW-KYPARSMVTDILISLDD 191 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~-~~~~~~~~~~i~~SpDG 191 (290)
.+|+|+|||++|||++...+.+.++... .++... +-..+......+... +...+. ....-..|.+|++++||
T Consensus 743 ~GIavspdG~~LYVADs~n~~Irv~D~~----tg~~~~-~~gg~~~~~~~l~~f--G~~dG~g~~~~l~~P~Gvavd~dG 815 (1057)
T PLN02919 743 SGISLSPDLKELYIADSESSSIRALDLK----TGGSRL-LAGGDPTFSDNLFKF--GDHDGVGSEVLLQHPLGVLCAKDG 815 (1057)
T ss_pred cEEEEeCCCCEEEEEECCCCeEEEEECC----CCcEEE-EEecccccCcccccc--cCCCCchhhhhccCCceeeEeCCC
Confidence 9999999999999998754433322111 111100 000000000000000 000000 00001357899999999
Q ss_pred CEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEE
Q psy11412 192 RYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRI 271 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L 271 (290)
+ ||+++.+++.|.+||... ........+|..-..++.. . ... -..|.++++++||+ |
T Consensus 816 ~-LYVADs~N~rIrviD~~t---g~v~tiaG~G~~G~~dG~~------------~-----~a~-l~~P~GIavd~dG~-l 872 (1057)
T PLN02919 816 Q-IYVADSYNHKIKKLDPAT---KRVTTLAGTGKAGFKDGKA------------L-----KAQ-LSEPAGLALGENGR-L 872 (1057)
T ss_pred c-EEEEECCCCEEEEEECCC---CeEEEEeccCCcCCCCCcc------------c-----ccc-cCCceEEEEeCCCC-E
Confidence 7 899999999999999743 2222222222100000000 0 000 13699999999996 8
Q ss_pred EEEcC
Q psy11412 272 YVSSS 276 (290)
Q Consensus 272 ~Van~ 276 (290)
|||+.
T Consensus 873 yVaDt 877 (1057)
T PLN02919 873 FVADT 877 (1057)
T ss_pred EEEEC
Confidence 88865
No 26
>KOG0266|consensus
Probab=98.93 E-value=3.5e-08 Score=96.41 Aligned_cols=156 Identities=20% Similarity=0.312 Sum_probs=97.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+..++|||||++|+.+. .+.+|++||+.+. ...+..+. |+ ...+.
T Consensus 205 ~v~~~~fs~d~~~l~s~s-~D~tiriwd~~~~--~~~~~~l~-gH------------------------------~~~v~ 250 (456)
T KOG0266|consen 205 GVSDVAFSPDGSYLLSGS-DDKTLRIWDLKDD--GRNLKTLK-GH------------------------------STYVT 250 (456)
T ss_pred ceeeeEECCCCcEEEEec-CCceEEEeeccCC--CeEEEEec-CC------------------------------CCceE
Confidence 577899999999887655 5899999999442 23333332 32 03567
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCC-CCceeEEEEccCCC
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPA-RSMVTDILISLDDR 192 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~-~~~~~~i~~SpDGr 192 (290)
.++|+|+|+.++..+- ++.+.+|++.. ...+.. +.. ......++|++||+
T Consensus 251 ~~~f~p~g~~i~Sgs~----------------D~tvriWd~~~---~~~~~~----------l~~hs~~is~~~f~~d~~ 301 (456)
T KOG0266|consen 251 SVAFSPDGNLLVSGSD----------------DGTVRIWDVRT---GECVRK----------LKGHSDGISGLAFSPDGN 301 (456)
T ss_pred EEEecCCCCEEEEecC----------------CCcEEEEeccC---CeEEEe----------eeccCCceEEEEECCCCC
Confidence 7999999955554332 22343444432 111111 111 24677899999999
Q ss_pred EEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEE
Q psy11412 193 YLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIY 272 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~ 272 (290)
+|+++. .++.|.+||+... ....+..+ .+.. .+ .-...+.|+|+|++|+
T Consensus 302 ~l~s~s-~d~~i~vwd~~~~-~~~~~~~~-~~~~-----------------~~-----------~~~~~~~fsp~~~~ll 350 (456)
T KOG0266|consen 302 LLVSAS-YDGTIRVWDLETG-SKLCLKLL-SGAE-----------------NS-----------APVTSVQFSPNGKYLL 350 (456)
T ss_pred EEEEcC-CCccEEEEECCCC-ceeeeecc-cCCC-----------------CC-----------CceeEEEECCCCcEEE
Confidence 999997 6999999999532 11111111 1110 00 0137899999999999
Q ss_pred EEcC--CCCCCCc
Q psy11412 273 VSSS--LFSPWDK 283 (290)
Q Consensus 273 Van~--~~~~~~~ 283 (290)
++.. ..+.|+-
T Consensus 351 ~~~~d~~~~~w~l 363 (456)
T KOG0266|consen 351 SASLDRTLKLWDL 363 (456)
T ss_pred EecCCCeEEEEEc
Confidence 9965 5666653
No 27
>KOG0639|consensus
Probab=98.90 E-value=1.8e-08 Score=96.36 Aligned_cols=158 Identities=20% Similarity=0.314 Sum_probs=105.6
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
+.-++++++|...|++|+.+ .|.|.|||+..+++...+.++..- ..+..
T Consensus 419 GEvVcAvtIS~~trhVyTgG--kgcVKVWdis~pg~k~PvsqLdcl-----------------------------~rdny 467 (705)
T KOG0639|consen 419 GEVVCAVTISNPTRHVYTGG--KGCVKVWDISQPGNKSPVSQLDCL-----------------------------NRDNY 467 (705)
T ss_pred CcEEEEEEecCCcceeEecC--CCeEEEeeccCCCCCCcccccccc-----------------------------Ccccc
Confidence 44688999999999999764 689999999875443333332211 11256
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccC-CCCceeEEEEccC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYP-ARSMVTDILISLD 190 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~-~~~~~~~i~~SpD 190 (290)
.|...++|||++|.|..|+ .++.+||+.... + .+. . .++ ....++++++|||
T Consensus 468 iRSckL~pdgrtLivGGea----------------stlsiWDLAapT-p-rik------a---eltssapaCyALa~spD 520 (705)
T KOG0639|consen 468 IRSCKLLPDGRTLIVGGEA----------------STLSIWDLAAPT-P-RIK------A---ELTSSAPACYALAISPD 520 (705)
T ss_pred eeeeEecCCCceEEecccc----------------ceeeeeeccCCC-c-chh------h---hcCCcchhhhhhhcCCc
Confidence 7889999999999998772 245556654310 0 111 0 111 1246788999999
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCE
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKR 270 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~ 270 (290)
.+..|... .++.|.|||+-+ ..++.++. |. .++..-|.+|+||..
T Consensus 521 akvcFscc-sdGnI~vwDLhn---q~~Vrqfq-Gh------------------------------tDGascIdis~dGtk 565 (705)
T KOG0639|consen 521 AKVCFSCC-SDGNIAVWDLHN---QTLVRQFQ-GH------------------------------TDGASCIDISKDGTK 565 (705)
T ss_pred cceeeeec-cCCcEEEEEccc---ceeeeccc-CC------------------------------CCCceeEEecCCCce
Confidence 99998777 899999999965 23443321 22 125677999999999
Q ss_pred EEEEcC--CCCCCC
Q psy11412 271 IYVSSS--LFSPWD 282 (290)
Q Consensus 271 L~Van~--~~~~~~ 282 (290)
||...- +.--||
T Consensus 566 lWTGGlDntvRcWD 579 (705)
T KOG0639|consen 566 LWTGGLDNTVRCWD 579 (705)
T ss_pred eecCCCccceeehh
Confidence 998743 445565
No 28
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.88 E-value=8.1e-08 Score=102.49 Aligned_cols=189 Identities=16% Similarity=0.147 Sum_probs=101.7
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
.+|..+++++++..||+++.+.+.|.+||... ..+..+ ++. .+.+. .+.++... . -..|
T Consensus 568 ~~P~gvavd~~~g~lyVaDs~n~rI~v~d~~G----~~i~~i--g~~-g~~G~----~dG~~~~a---------~-f~~P 626 (1057)
T PLN02919 568 KFPGKLAIDLLNNRLFISDSNHNRIVVTDLDG----NFIVQI--GST-GEEGL----RDGSFEDA---------T-FNRP 626 (1057)
T ss_pred CCCceEEEECCCCeEEEEECCCCeEEEEeCCC----CEEEEE--ccC-CCcCC----CCCchhcc---------c-cCCC
Confidence 47889999999999999999999999999742 122111 210 00000 00000000 0 1479
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCcccc---CCCCceeEEEEcc
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKY---PARSMVTDILISL 189 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~---~~~~~~~~i~~Sp 189 (290)
++|+|+++|..|||++...+.+-++.. .++.+. .+...... .....+... ..-+.|.+|+|+|
T Consensus 627 ~GIavd~~gn~LYVaDt~n~~Ir~id~-----~~~~V~-----tlag~G~~----g~~~~gg~~~~~~~ln~P~gVa~dp 692 (1057)
T PLN02919 627 QGLAYNAKKNLLYVADTENHALREIDF-----VNETVR-----TLAGNGTK----GSDYQGGKKGTSQVLNSPWDVCFEP 692 (1057)
T ss_pred cEEEEeCCCCEEEEEeCCCceEEEEec-----CCCEEE-----EEeccCcc----cCCCCCChhhhHhhcCCCeEEEEec
Confidence 999999999999998763222211110 011110 00000000 000000000 0013578999999
Q ss_pred CCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCC
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGK 269 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~ 269 (290)
++..||+++.+++.|.+||..+. . +..+...|.. ...+. ..+. .....+|.+|+|+|||+
T Consensus 693 ~~g~LyVad~~~~~I~v~d~~~g---~-v~~~~G~G~~------~~~~g----~~~~------~~~~~~P~GIavspdG~ 752 (1057)
T PLN02919 693 VNEKVYIAMAGQHQIWEYNISDG---V-TRVFSGDGYE------RNLNG----SSGT------STSFAQPSGISLSPDLK 752 (1057)
T ss_pred CCCeEEEEECCCCeEEEEECCCC---e-EEEEecCCcc------ccCCC----Cccc------cccccCccEEEEeCCCC
Confidence 88899999999999999998541 1 1111111100 00000 0000 00013799999999999
Q ss_pred EEEEEcC
Q psy11412 270 RIYVSSS 276 (290)
Q Consensus 270 ~L~Van~ 276 (290)
+|||++.
T Consensus 753 ~LYVADs 759 (1057)
T PLN02919 753 ELYIADS 759 (1057)
T ss_pred EEEEEEC
Confidence 9999976
No 29
>PTZ00421 coronin; Provisional
Probab=98.85 E-value=4.2e-07 Score=89.70 Aligned_cols=175 Identities=14% Similarity=0.204 Sum_probs=101.0
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCCeEEEEEcCCCCCce----eeeEEeecccccCCCceEEecCCCCcCCCCcceeecccc
Q psy11412 34 MVTDILISL-DDRYLYTSNWMHGDIRQYDIRDTAHPV----LVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRF 108 (290)
Q Consensus 34 ~p~~va~Sp-DGr~Lyva~~~~g~V~v~dv~d~~~~~----~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 108 (290)
.+.+++|+| |+++|++++. +++|++||+.+..... .+..+ .+ +
T Consensus 77 ~V~~v~fsP~d~~~LaSgS~-DgtIkIWdi~~~~~~~~~~~~l~~L-~g----------------------------H-- 124 (493)
T PTZ00421 77 PIIDVAFNPFDPQKLFTASE-DGTIMGWGIPEEGLTQNISDPIVHL-QG----------------------------H-- 124 (493)
T ss_pred CEEEEEEcCCCCCEEEEEeC-CCEEEEEecCCCccccccCcceEEe-cC----------------------------C--
Confidence 578999999 8898887765 8999999996532110 11111 11 0
Q ss_pred CCCceEEEEccCC-CEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEE
Q psy11412 109 TGSSQMFQLSLDG-KRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILI 187 (290)
Q Consensus 109 g~gPr~vafsPdG-~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~ 187 (290)
...+..++|+|++ ..|+.++. ++.+.+||+.. .+.+..+ .+ .......+++
T Consensus 125 ~~~V~~l~f~P~~~~iLaSgs~----------------DgtVrIWDl~t---g~~~~~l-----~~----h~~~V~sla~ 176 (493)
T PTZ00421 125 TKKVGIVSFHPSAMNVLASAGA----------------DMVVNVWDVER---GKAVEVI-----KC----HSDQITSLEW 176 (493)
T ss_pred CCcEEEEEeCcCCCCEEEEEeC----------------CCEEEEEECCC---CeEEEEE-----cC----CCCceEEEEE
Confidence 1457789999997 45665443 22444455432 1111110 01 1235778999
Q ss_pred ccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEe--------------eCcee-------cCCCceEEecCCCCCCCCC
Q psy11412 188 SLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIF--------------LGGKI-------QSDSGVTVIDDPELDKQPD 246 (290)
Q Consensus 188 SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~--------------~Gg~~-------~~~~~v~~~~~~~~~~~~~ 246 (290)
+|||+.|+++. .++.|.+||+.+.. .+.++. .++.+ ..++.|.+||..... .|.
T Consensus 177 spdG~lLatgs-~Dg~IrIwD~rsg~---~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~-~p~ 251 (493)
T PTZ00421 177 NLDGSLLCTTS-KDKKLNIIDPRDGT---IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA-SPY 251 (493)
T ss_pred ECCCCEEEEec-CCCEEEEEECCCCc---EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC-Cce
Confidence 99999998888 68999999985421 111110 00111 235679999975432 111
Q ss_pred cceeecccccCCcceEEEccCCCEEEEEc
Q psy11412 247 PVIIKGRRFTGSSQMFQLSLDGKRIYVSS 275 (290)
Q Consensus 247 ~~~~~~~~~~~~P~~~a~sPDG~~L~Van 275 (290)
. ..............|+|||+.||++.
T Consensus 252 ~--~~~~d~~~~~~~~~~d~d~~~L~lgg 278 (493)
T PTZ00421 252 S--TVDLDQSSALFIPFFDEDTNLLYIGS 278 (493)
T ss_pred e--EeccCCCCceEEEEEcCCCCEEEEEE
Confidence 1 11111111234457899999999875
No 30
>KOG0291|consensus
Probab=98.82 E-value=2.1e-07 Score=92.71 Aligned_cols=162 Identities=17% Similarity=0.247 Sum_probs=97.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
....++.||||+++++.+ .+|+|.|||... .-++-+. .. | .+++.
T Consensus 352 ~i~~l~YSpDgq~iaTG~-eDgKVKvWn~~S---gfC~vTF-te---------------------H---------ts~Vt 396 (893)
T KOG0291|consen 352 RITSLAYSPDGQLIATGA-EDGKVKVWNTQS---GFCFVTF-TE---------------------H---------TSGVT 396 (893)
T ss_pred ceeeEEECCCCcEEEecc-CCCcEEEEeccC---ceEEEEe-cc---------------------C---------CCceE
Confidence 456899999999998766 589999999754 2232211 10 0 26788
Q ss_pred EEEEccCCCEEEEEcCCCCC---cceeeccccc----------------CCCceeec-------ceeeeeeecccccccC
Q psy11412 114 MFQLSLDGKRIYVSSSLFSP---WDKEIYPDLV----------------KTDAAFGS-------DEIMEFIQRNEMRSMP 167 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~---~d~~~~~~~~----------------~~g~~~~~-------~~~~~~~~~~~i~~~p 167 (290)
.+.|+..|+.+..+ .|.++ ||.-.|.+.. ..|..+.. +-++++.+.+.+-
T Consensus 397 ~v~f~~~g~~llss-SLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllD--- 472 (893)
T KOG0291|consen 397 AVQFTARGNVLLSS-SLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLD--- 472 (893)
T ss_pred EEEEEecCCEEEEe-ecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeee---
Confidence 89999999988855 45444 4442211100 01211111 1111111111100
Q ss_pred ccccCccccCCC-CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCC
Q psy11412 168 LSSLGSWKYPAR-SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPD 246 (290)
Q Consensus 168 ~~~~~~~~~~~~-~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~ 246 (290)
.+.+. +.+..+.|+|+|..||.+.| +.+|.+||+-+. ...+.++.+-.
T Consensus 473 -------iLsGHEgPVs~l~f~~~~~~LaS~SW-DkTVRiW~if~s--~~~vEtl~i~s--------------------- 521 (893)
T KOG0291|consen 473 -------ILSGHEGPVSGLSFSPDGSLLASGSW-DKTVRIWDIFSS--SGTVETLEIRS--------------------- 521 (893)
T ss_pred -------hhcCCCCcceeeEEccccCeEEeccc-cceEEEEEeecc--CceeeeEeecc---------------------
Confidence 12222 35677899999999999996 789999999542 22334433322
Q ss_pred cceeecccccCCcceEEEccCCCEEEEEcC
Q psy11412 247 PVIIKGRRFTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 247 ~~~~~~~~~~~~P~~~a~sPDG~~L~Van~ 276 (290)
..-.++|+|||+.|+||.-
T Consensus 522 -----------dvl~vsfrPdG~elaVaTl 540 (893)
T KOG0291|consen 522 -----------DVLAVSFRPDGKELAVATL 540 (893)
T ss_pred -----------ceeEEEEcCCCCeEEEEEe
Confidence 3567999999999999853
No 31
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.79 E-value=1.8e-07 Score=86.11 Aligned_cols=65 Identities=25% Similarity=0.266 Sum_probs=52.5
Q ss_pred EEEEccCCCEEEEEeC----CCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 184 DILISLDDRYLYTSNW----MHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 184 ~i~~SpDGr~Lyvs~r----~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
+-+|||||++||++.- +.+.|-|||+. ...+.+++++++|- +|
T Consensus 55 Hg~fs~dG~~LytTEnd~~~g~G~IgVyd~~--~~~~ri~E~~s~GI-------------------------------GP 101 (305)
T PF07433_consen 55 HGVFSPDGRLLYTTENDYETGRGVIGVYDAA--RGYRRIGEFPSHGI-------------------------------GP 101 (305)
T ss_pred CEEEcCCCCEEEEeccccCCCcEEEEEEECc--CCcEEEeEecCCCc-------------------------------Ch
Confidence 3568888888887632 35789999986 35788999999883 79
Q ss_pred ceEEEccCCCEEEEEcCCCCCC
Q psy11412 260 QMFQLSLDGKRIYVSSSLFSPW 281 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~~~~~~ 281 (290)
..+.+.|||+.|.|||..+...
T Consensus 102 Hel~l~pDG~tLvVANGGI~Th 123 (305)
T PF07433_consen 102 HELLLMPDGETLVVANGGIETH 123 (305)
T ss_pred hhEEEcCCCCEEEEEcCCCccC
Confidence 9999999999999999977655
No 32
>KOG1446|consensus
Probab=98.78 E-value=3.7e-07 Score=83.00 Aligned_cols=156 Identities=15% Similarity=0.144 Sum_probs=94.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+..|..+|-+....++.+ +.+|++||+.... ..+-+.. .++-
T Consensus 102 ~V~sL~~sP~~d~FlS~S~-D~tvrLWDlR~~~---cqg~l~~---------------------------------~~~p 144 (311)
T KOG1446|consen 102 RVNSLSVSPKDDTFLSSSL-DKTVRLWDLRVKK---CQGLLNL---------------------------------SGRP 144 (311)
T ss_pred eEEEEEecCCCCeEEeccc-CCeEEeeEecCCC---CceEEec---------------------------------CCCc
Confidence 5788999999887776665 7899999997432 2222212 1333
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCC--CCceeEEEEccCC
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPA--RSMVTDILISLDD 191 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~--~~~~~~i~~SpDG 191 (290)
-.||+|.|-.++++++.. .+...|+..+ ..+.+....+.. ...-.+|.|||||
T Consensus 145 i~AfDp~GLifA~~~~~~----------------~IkLyD~Rs~---------dkgPF~tf~i~~~~~~ew~~l~FS~dG 199 (311)
T KOG1446|consen 145 IAAFDPEGLIFALANGSE----------------LIKLYDLRSF---------DKGPFTTFSITDNDEAEWTDLEFSPDG 199 (311)
T ss_pred ceeECCCCcEEEEecCCC----------------eEEEEEeccc---------CCCCceeEccCCCCccceeeeEEcCCC
Confidence 479999999888887621 1211222111 000010001111 1234679999999
Q ss_pred CEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEE
Q psy11412 192 RYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRI 271 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L 271 (290)
|++.++. .++.+.++|--+ ..++.+...-- . -+.-|-+..|+|||+++
T Consensus 200 K~iLlsT-~~s~~~~lDAf~---G~~~~tfs~~~------------~----------------~~~~~~~a~ftPds~Fv 247 (311)
T KOG1446|consen 200 KSILLST-NASFIYLLDAFD---GTVKSTFSGYP------------N----------------AGNLPLSATFTPDSKFV 247 (311)
T ss_pred CEEEEEe-CCCcEEEEEccC---CcEeeeEeecc------------C----------------CCCcceeEEECCCCcEE
Confidence 9999998 677888887644 22333222110 0 01146789999999999
Q ss_pred EEEcC--CCCCCCc
Q psy11412 272 YVSSS--LFSPWDK 283 (290)
Q Consensus 272 ~Van~--~~~~~~~ 283 (290)
+.+.. .+-.|+-
T Consensus 248 l~gs~dg~i~vw~~ 261 (311)
T KOG1446|consen 248 LSGSDDGTIHVWNL 261 (311)
T ss_pred EEecCCCcEEEEEc
Confidence 99855 5666654
No 33
>KOG0266|consensus
Probab=98.77 E-value=2e-07 Score=91.07 Aligned_cols=155 Identities=22% Similarity=0.278 Sum_probs=97.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
....+.||+||++|+.+. .++.+++|+...... ..+..+ .++ ..+.+
T Consensus 161 sv~~~~fs~~g~~l~~~~-~~~~i~~~~~~~~~~-~~~~~l-~~h------------------------------~~~v~ 207 (456)
T KOG0266|consen 161 SVTCVDFSPDGRALAAAS-SDGLIRIWKLEGIKS-NLLREL-SGH------------------------------TRGVS 207 (456)
T ss_pred ceEEEEEcCCCCeEEEcc-CCCcEEEeecccccc-hhhccc-ccc------------------------------cccee
Confidence 455689999999976555 588999999843221 111111 111 14778
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.++|+|||+++..++. +..+.++++.. ....+++ +.+ .....+.++|+|+|+.
T Consensus 208 ~~~fs~d~~~l~s~s~----------------D~tiriwd~~~--~~~~~~~-----l~g----H~~~v~~~~f~p~g~~ 260 (456)
T KOG0266|consen 208 DVAFSPDGSYLLSGSD----------------DKTLRIWDLKD--DGRNLKT-----LKG----HSTYVTSVAFSPDGNL 260 (456)
T ss_pred eeEECCCCcEEEEecC----------------CceEEEeeccC--CCeEEEE-----ecC----CCCceEEEEecCCCCE
Confidence 8999999996665443 33455555511 0112221 111 2356789999999955
Q ss_pred EEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEE
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYV 273 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~V 273 (290)
++|...+++|.+||+.. .+.+..+.. .+ +....++|++||+.|++
T Consensus 261 -i~Sgs~D~tvriWd~~~---~~~~~~l~~-hs------------------------------~~is~~~f~~d~~~l~s 305 (456)
T KOG0266|consen 261 -LVSGSDDGTVRIWDVRT---GECVRKLKG-HS------------------------------DGISGLAFSPDGNLLVS 305 (456)
T ss_pred -EEEecCCCcEEEEeccC---CeEEEeeec-cC------------------------------CceEEEEECCCCCEEEE
Confidence 55555899999999953 233333322 10 14677999999999999
Q ss_pred EcC--CCCCCCc
Q psy11412 274 SSS--LFSPWDK 283 (290)
Q Consensus 274 an~--~~~~~~~ 283 (290)
+.. .+..||.
T Consensus 306 ~s~d~~i~vwd~ 317 (456)
T KOG0266|consen 306 ASYDGTIRVWDL 317 (456)
T ss_pred cCCCccEEEEEC
Confidence 953 6666664
No 34
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.76 E-value=9.8e-07 Score=76.25 Aligned_cols=146 Identities=25% Similarity=0.324 Sum_probs=93.1
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
..+..+.++|++++|+++. .++.|.+||+... +.+..+... ....
T Consensus 136 ~~i~~~~~~~~~~~l~~~~-~~~~i~i~d~~~~---~~~~~~~~~-------------------------------~~~i 180 (289)
T cd00200 136 DWVNSVAFSPDGTFVASSS-QDGTIKLWDLRTG---KCVATLTGH-------------------------------TGEV 180 (289)
T ss_pred CcEEEEEEcCcCCEEEEEc-CCCcEEEEEcccc---ccceeEecC-------------------------------cccc
Confidence 3578999999999988776 4789999998642 222222111 1357
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
..+.|+|+++.+++++. ++ .+..++... .+.+.... ........+.++||++
T Consensus 181 ~~~~~~~~~~~l~~~~~---------------~~-~i~i~d~~~---~~~~~~~~---------~~~~~i~~~~~~~~~~ 232 (289)
T cd00200 181 NSVAFSPDGEKLLSSSS---------------DG-TIKLWDLST---GKCLGTLR---------GHENGVNSVAFSPDGY 232 (289)
T ss_pred ceEEECCCcCEEEEecC---------------CC-cEEEEECCC---Cceecchh---------hcCCceEEEEEcCCCc
Confidence 78999999999998765 11 232233221 11111100 0123567799999988
Q ss_pred EEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEE
Q psy11412 193 YLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIY 272 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~ 272 (290)
+++++. .++.|.+||+.. ...+..+. +. ...+..+.|+|+|++|+
T Consensus 233 ~~~~~~-~~~~i~i~~~~~---~~~~~~~~-~~------------------------------~~~i~~~~~~~~~~~l~ 277 (289)
T cd00200 233 LLASGS-EDGTIRVWDLRT---GECVQTLS-GH------------------------------TNSVTSLAWSPDGKRLA 277 (289)
T ss_pred EEEEEc-CCCcEEEEEcCC---ceeEEEcc-cc------------------------------CCcEEEEEECCCCCEEE
Confidence 777665 688999999853 23333332 11 01478899999999999
Q ss_pred EEcC
Q psy11412 273 VSSS 276 (290)
Q Consensus 273 Van~ 276 (290)
++..
T Consensus 278 ~~~~ 281 (289)
T cd00200 278 SGSA 281 (289)
T ss_pred EecC
Confidence 9865
No 35
>KOG1407|consensus
Probab=98.76 E-value=2.3e-07 Score=82.79 Aligned_cols=113 Identities=18% Similarity=0.196 Sum_probs=73.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.-..++.||||.++++.+- ++.|..+|...- +....-.. -....
T Consensus 108 eni~i~wsp~g~~~~~~~k-dD~it~id~r~~---~~~~~~~~--------------------------------~~e~n 151 (313)
T KOG1407|consen 108 ENINITWSPDGEYIAVGNK-DDRITFIDARTY---KIVNEEQF--------------------------------KFEVN 151 (313)
T ss_pred cceEEEEcCCCCEEEEecC-cccEEEEEeccc---ceeehhcc--------------------------------cceee
Confidence 4456889999999999986 779999997642 11110000 03456
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.++++-++..++.+|.++ . +++......+++.++.. .+....-|.|+||||+
T Consensus 152 e~~w~~~nd~Fflt~GlG----------------~---v~ILsypsLkpv~si~A---------H~snCicI~f~p~Gry 203 (313)
T KOG1407|consen 152 EISWNNSNDLFFLTNGLG----------------C---VEILSYPSLKPVQSIKA---------HPSNCICIEFDPDGRY 203 (313)
T ss_pred eeeecCCCCEEEEecCCc----------------e---EEEEecccccccccccc---------CCcceEEEEECCCCce
Confidence 689998999888887632 1 12222222222222111 2345778999999999
Q ss_pred EEEEeCCCCcEEEEEecC
Q psy11412 194 LYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d 211 (290)
+++.. .+..+++||+.+
T Consensus 204 fA~Gs-ADAlvSLWD~~E 220 (313)
T KOG1407|consen 204 FATGS-ADALVSLWDVDE 220 (313)
T ss_pred Eeecc-ccceeeccChhH
Confidence 98887 688999999964
No 36
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.72 E-value=8.7e-07 Score=76.98 Aligned_cols=59 Identities=20% Similarity=0.327 Sum_probs=44.3
Q ss_pred eeEEEEccCCCEEEEEeCC--CCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 182 VTDILISLDDRYLYTSNWM--HGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 182 ~~~i~~SpDGr~Lyvs~r~--~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
...|.+||+|++|.+++.+ .+.|.+||+.+ .+.+...... ..
T Consensus 103 ~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~---~~~i~~~~~~---------------------------------~~ 146 (194)
T PF08662_consen 103 RNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK---KKKISTFEHS---------------------------------DA 146 (194)
T ss_pred ceEEEECCCCCEEEEEEccCCCcEEEEEECCC---CEEeeccccC---------------------------------cE
Confidence 3469999999999998765 36799999963 4444433211 35
Q ss_pred ceEEEccCCCEEEEEcC
Q psy11412 260 QMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~ 276 (290)
..+++||||++|+++..
T Consensus 147 t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 147 TDVEWSPDGRYLATATT 163 (194)
T ss_pred EEEEEcCCCCEEEEEEe
Confidence 67999999999999865
No 37
>KOG0318|consensus
Probab=98.71 E-value=4.1e-07 Score=87.61 Aligned_cols=184 Identities=16% Similarity=0.198 Sum_probs=107.4
Q ss_pred ceEEEE-EcCCCCEEEEEeCCCCeEEEEEcCCCCCceeee-EEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 34 MVTDIL-ISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVG-QIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 34 ~p~~va-~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~-~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
++.-+| +||.|-|++..+ ..|+|++||.... -..+. ++.+ ..+.
T Consensus 60 ~~vtVAkySPsG~yiASGD-~sG~vRIWdtt~~--~hiLKnef~v-------------------------------~aG~ 105 (603)
T KOG0318|consen 60 HQVTVAKYSPSGFYIASGD-VSGKVRIWDTTQK--EHILKNEFQV-------------------------------LAGP 105 (603)
T ss_pred ceeEEEEeCCCceEEeecC-CcCcEEEEeccCc--ceeeeeeeee-------------------------------cccc
Confidence 455554 999999987665 4899999998642 12221 1100 0023
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceee-cccccCCC---ceeecceeeeeeecccccccCcc------ccCcc------c
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEI-YPDLVKTD---AAFGSDEIMEFIQRNEMRSMPLS------SLGSW------K 175 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~-~~~~~~~g---~~~~~~~~~~~~~~~~i~~~p~~------~~~~~------~ 175 (290)
.-.++++.|++++.++.|........+ ++.....| +.-..++..++.+.++.+.+... .++|- .
T Consensus 106 I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s 185 (603)
T KOG0318|consen 106 IKDISWDFDSKRIAAVGEGRERFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSS 185 (603)
T ss_pred cccceeCCCCcEEEEEecCccceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeec
Confidence 456999999999999998543333322 22111111 12223445555444433321110 01110 0
Q ss_pred cCC-CCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeeccc
Q psy11412 176 YPA-RSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRR 254 (290)
Q Consensus 176 ~~~-~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 254 (290)
.-+ ...+..+.+||||.+...+. .++.|.+||=.+ ...++.+.-.. +|
T Consensus 186 ~r~HskFV~~VRysPDG~~Fat~g-sDgki~iyDGkt---ge~vg~l~~~~-------------------aH-------- 234 (603)
T KOG0318|consen 186 FREHSKFVNCVRYSPDGSRFATAG-SDGKIYIYDGKT---GEKVGELEDSD-------------------AH-------- 234 (603)
T ss_pred ccccccceeeEEECCCCCeEEEec-CCccEEEEcCCC---ccEEEEecCCC-------------------Cc--------
Confidence 000 13588899999999977766 799999997532 44555443211 11
Q ss_pred ccCCcceEEEccCCCEEEEEcC--CCCCCCc
Q psy11412 255 FTGSSQMFQLSLDGKRIYVSSS--LFSPWDK 283 (290)
Q Consensus 255 ~~~~P~~~a~sPDG~~L~Van~--~~~~~~~ 283 (290)
.|...++++|||+++++.+++ +.+-||-
T Consensus 235 -kGsIfalsWsPDs~~~~T~SaDkt~KIWdV 264 (603)
T KOG0318|consen 235 -KGSIFALSWSPDSTQFLTVSADKTIKIWDV 264 (603)
T ss_pred -cccEEEEEECCCCceEEEecCCceEEEEEe
Confidence 135899999999999999977 6666763
No 38
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.69 E-value=1.5e-06 Score=84.25 Aligned_cols=31 Identities=13% Similarity=-0.012 Sum_probs=23.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCC--CeEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMH--GDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~--g~V~v~dv~d 64 (290)
.....++||||++|+.+...+ ..|.+||+..
T Consensus 197 ~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~ 229 (427)
T PRK02889 197 PIISPAWSPDGTKLAYVSFESKKPVVYVHDLAT 229 (427)
T ss_pred CcccceEcCCCCEEEEEEccCCCcEEEEEECCC
Confidence 345789999999987765433 4599999865
No 39
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.69 E-value=3.2e-06 Score=73.05 Aligned_cols=144 Identities=22% Similarity=0.286 Sum_probs=91.3
Q ss_pred eEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceE
Q psy11412 35 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQM 114 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~ 114 (290)
...+.++|++++|++++. +|.|.+|++.... .+..+... ...+..
T Consensus 54 i~~~~~~~~~~~l~~~~~-~~~i~i~~~~~~~---~~~~~~~~-------------------------------~~~i~~ 98 (289)
T cd00200 54 VRDVAASADGTYLASGSS-DKTIRLWDLETGE---CVRTLTGH-------------------------------TSYVSS 98 (289)
T ss_pred eeEEEECCCCCEEEEEcC-CCeEEEEEcCccc---ceEEEecc-------------------------------CCcEEE
Confidence 458999999999988875 8999999997532 12111110 135778
Q ss_pred EEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCEE
Q psy11412 115 FQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYL 194 (290)
Q Consensus 115 vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~L 194 (290)
+.|+|+++.+++... ++ .+..++... .+.+..+. ........+.++|++++|
T Consensus 99 ~~~~~~~~~~~~~~~---------------~~-~i~~~~~~~---~~~~~~~~---------~~~~~i~~~~~~~~~~~l 150 (289)
T cd00200 99 VAFSPDGRILSSSSR---------------DK-TIKVWDVET---GKCLTTLR---------GHTDWVNSVAFSPDGTFV 150 (289)
T ss_pred EEEcCCCCEEEEecC---------------CC-eEEEEECCC---cEEEEEec---------cCCCcEEEEEEcCcCCEE
Confidence 999999888887653 12 233333321 11111100 012356789999999998
Q ss_pred EEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEEE
Q psy11412 195 YTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVS 274 (290)
Q Consensus 195 yvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Va 274 (290)
+++. .++.|.+||+.. .+.+..+.... +....+.|+|+|+.|+++
T Consensus 151 ~~~~-~~~~i~i~d~~~---~~~~~~~~~~~-------------------------------~~i~~~~~~~~~~~l~~~ 195 (289)
T cd00200 151 ASSS-QDGTIKLWDLRT---GKCVATLTGHT-------------------------------GEVNSVAFSPDGEKLLSS 195 (289)
T ss_pred EEEc-CCCcEEEEEccc---cccceeEecCc-------------------------------cccceEEECCCcCEEEEe
Confidence 8876 578999999853 22233222111 146789999999988888
Q ss_pred cC
Q psy11412 275 SS 276 (290)
Q Consensus 275 n~ 276 (290)
+.
T Consensus 196 ~~ 197 (289)
T cd00200 196 SS 197 (289)
T ss_pred cC
Confidence 64
No 40
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.68 E-value=1.4e-06 Score=84.58 Aligned_cols=34 Identities=18% Similarity=0.100 Sum_probs=24.1
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCC--eEEEEEcCC
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHG--DIRQYDIRD 64 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g--~V~v~dv~d 64 (290)
.+++....++||||++|+.+...+| .|.+||+..
T Consensus 241 ~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~t 276 (429)
T PRK03629 241 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS 276 (429)
T ss_pred CCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 3444556899999999987643344 588888854
No 41
>KOG1539|consensus
Probab=98.66 E-value=6e-07 Score=90.33 Aligned_cols=146 Identities=18% Similarity=0.303 Sum_probs=101.5
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCC
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 110 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 110 (290)
..+.+.+++++--++.+.++++ +|-+..||+.. ..++.++.+| .
T Consensus 492 h~~~V~gla~D~~n~~~vsa~~-~Gilkfw~f~~---k~l~~~l~l~--------------------------------~ 535 (910)
T KOG1539|consen 492 HKGEVTGLAVDGTNRLLVSAGA-DGILKFWDFKK---KVLKKSLRLG--------------------------------S 535 (910)
T ss_pred ccCceeEEEecCCCceEEEccC-cceEEEEecCC---cceeeeeccC--------------------------------C
Confidence 4557889999988888876665 89999999965 2355555444 5
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
.+.++..|..-..+.+++. .-. +.+.|..+++.++. +.| .++...++.||||
T Consensus 536 ~~~~iv~hr~s~l~a~~~d----------------df~---I~vvD~~t~kvvR~-----f~g----h~nritd~~FS~D 587 (910)
T KOG1539|consen 536 SITGIVYHRVSDLLAIALD----------------DFS---IRVVDVVTRKVVRE-----FWG----HGNRITDMTFSPD 587 (910)
T ss_pred CcceeeeeehhhhhhhhcC----------------cee---EEEEEchhhhhhHH-----hhc----cccceeeeEeCCC
Confidence 6677888888877777654 112 22333222333331 111 3467889999999
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCE
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKR 270 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~ 270 (290)
||+|.++. .+++|.+||+.. ..+|.-+.+.. -+-.+.|||.|.+
T Consensus 588 grWlisas-mD~tIr~wDlpt---~~lID~~~vd~--------------------------------~~~sls~SPngD~ 631 (910)
T KOG1539|consen 588 GRWLISAS-MDSTIRTWDLPT---GTLIDGLLVDS--------------------------------PCTSLSFSPNGDF 631 (910)
T ss_pred CcEEEEee-cCCcEEEEeccC---cceeeeEecCC--------------------------------cceeeEECCCCCE
Confidence 99999998 899999999953 34555443322 3578999999999
Q ss_pred EEEEcC
Q psy11412 271 IYVSSS 276 (290)
Q Consensus 271 L~Van~ 276 (290)
|+++..
T Consensus 632 LAT~Hv 637 (910)
T KOG1539|consen 632 LATVHV 637 (910)
T ss_pred EEEEEe
Confidence 999866
No 42
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.66 E-value=1.3e-06 Score=77.87 Aligned_cols=125 Identities=17% Similarity=0.197 Sum_probs=69.0
Q ss_pred eEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceE
Q psy11412 35 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQM 114 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~ 114 (290)
|.++++...+..||+++. +.+.++|..+ +..+.+.....+. .....|..
T Consensus 42 ~~G~~~~~~~g~l~v~~~--~~~~~~d~~~-g~~~~~~~~~~~~----------------------------~~~~~~ND 90 (246)
T PF08450_consen 42 PNGMAFDRPDGRLYVADS--GGIAVVDPDT-GKVTVLADLPDGG----------------------------VPFNRPND 90 (246)
T ss_dssp EEEEEEECTTSEEEEEET--TCEEEEETTT-TEEEEEEEEETTC----------------------------SCTEEEEE
T ss_pred CceEEEEccCCEEEEEEc--CceEEEecCC-CcEEEEeeccCCC----------------------------cccCCCce
Confidence 888888843466777775 4556667654 2222222211110 01257899
Q ss_pred EEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCEE
Q psy11412 115 FQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYL 194 (290)
Q Consensus 115 vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~L 194 (290)
++++|+|+ ||+++......... ..+.+..++.. ..+..+ ...-..|.+|+|||||+.|
T Consensus 91 ~~vd~~G~-ly~t~~~~~~~~~~-------~~g~v~~~~~~-----~~~~~~---------~~~~~~pNGi~~s~dg~~l 148 (246)
T PF08450_consen 91 VAVDPDGN-LYVTDSGGGGASGI-------DPGSVYRIDPD-----GKVTVV---------ADGLGFPNGIAFSPDGKTL 148 (246)
T ss_dssp EEE-TTS--EEEEEECCBCTTCG-------GSEEEEEEETT-----SEEEEE---------EEEESSEEEEEEETTSSEE
T ss_pred EEEcCCCC-EEEEecCCCccccc-------cccceEEECCC-----CeEEEE---------ecCcccccceEECCcchhe
Confidence 99999999 88876522111000 00112111110 001000 0001357889999999999
Q ss_pred EEEeCCCCcEEEEEecCC
Q psy11412 195 YTSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 195 yvs~r~~~~V~v~Dv~d~ 212 (290)
|+++-..+.|..|++...
T Consensus 149 yv~ds~~~~i~~~~~~~~ 166 (246)
T PF08450_consen 149 YVADSFNGRIWRFDLDAD 166 (246)
T ss_dssp EEEETTTTEEEEEEEETT
T ss_pred eecccccceeEEEecccc
Confidence 999988999999999643
No 43
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.66 E-value=1e-06 Score=85.29 Aligned_cols=49 Identities=16% Similarity=0.096 Sum_probs=29.6
Q ss_pred EEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcC
Q psy11412 12 DKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIR 63 (290)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~ 63 (290)
-.+.|+..++..... ..++.....++||||++|+.+...+|...+|.++
T Consensus 222 I~~~dl~~g~~~~l~---~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d 270 (427)
T PRK02889 222 VYVHDLATGRRRVVA---NFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVN 270 (427)
T ss_pred EEEEECCCCCEEEee---cCCCCccceEECCCCCEEEEEEccCCCceEEEEE
Confidence 345566554432211 2344556789999999998654446666666653
No 44
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.65 E-value=1.6e-06 Score=79.86 Aligned_cols=200 Identities=22% Similarity=0.227 Sum_probs=112.0
Q ss_pred CceeEEEEEecCCCccCCCCCCCCCCCc-eEEEEEcCCCCEEEEE----eCCCCeEEEEEcCCCCCceeeeEEeeccccc
Q psy11412 7 GTYKADKVIDIPAKQVQGYPGGDKVPAM-VTDILISLDDRYLYTS----NWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQ 81 (290)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~-p~~va~SpDGr~Lyva----~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~ 81 (290)
|+| .-|+|...++....+ ..+-+.+ --|-+|||||++||++ ..+.|.|-|||... ..+.++++..+
T Consensus 27 G~~--~~v~D~~~g~~~~~~-~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~--~~~ri~E~~s~---- 97 (305)
T PF07433_consen 27 GTF--ALVFDCRTGQLLQRL-WAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR--GYRRIGEFPSH---- 97 (305)
T ss_pred CcE--EEEEEcCCCceeeEE-cCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC--CcEEEeEecCC----
Confidence 555 357888888777665 2222223 3378999999999998 22468899999863 46777776554
Q ss_pred CCCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecc
Q psy11412 82 SDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRN 161 (290)
Q Consensus 82 ~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~ 161 (290)
|-+|+.+.+.|||++|.|+|....+-- + .|....-++... +.
T Consensus 98 ---------------------------GIGPHel~l~pDG~tLvVANGGI~Thp-----d---~GR~kLNl~tM~---ps 139 (305)
T PF07433_consen 98 ---------------------------GIGPHELLLMPDGETLVVANGGIETHP-----D---SGRAKLNLDTMQ---PS 139 (305)
T ss_pred ---------------------------CcChhhEEEcCCCCEEEEEcCCCccCc-----c---cCceecChhhcC---Cc
Confidence 368999999999999999997432210 0 010000011111 00
Q ss_pred cccc-cCccc-cCccccCCC---CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEe
Q psy11412 162 EMRS-MPLSS-LGSWKYPAR---SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVI 236 (290)
Q Consensus 162 ~i~~-~p~~~-~~~~~~~~~---~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~ 236 (290)
.+.. ...+. ++-|.+|.. ...+++++++||+.++.--+ ++. ....+-+++...-|+ .++..
T Consensus 140 L~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~-qg~-------~~~~~PLva~~~~g~------~~~~~ 205 (305)
T PF07433_consen 140 LVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQY-QGD-------PGDAPPLVALHRRGG------ALRLL 205 (305)
T ss_pred eEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEec-CCC-------CCccCCeEEEEcCCC------cceec
Confidence 0000 00111 122334332 35789999999988775442 221 111233444433332 12222
Q ss_pred cCCCCCCCCCcceeecccccCCcceEEEccCCCEEEEEcC
Q psy11412 237 DDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~ 276 (290)
+..+. .-.++.++--+|++++||+++++++-
T Consensus 206 ~~p~~---------~~~~l~~Y~gSIa~~~~g~~ia~tsP 236 (305)
T PF07433_consen 206 PAPEE---------QWRRLNGYIGSIAADRDGRLIAVTSP 236 (305)
T ss_pred cCChH---------HHHhhCCceEEEEEeCCCCEEEEECC
Confidence 21110 01233456788999999999988854
No 45
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.65 E-value=1.3e-06 Score=84.67 Aligned_cols=50 Identities=26% Similarity=0.237 Sum_probs=29.4
Q ss_pred EEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCC--eEEEEEcCC
Q psy11412 12 DKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHG--DIRQYDIRD 64 (290)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g--~V~v~dv~d 64 (290)
-.+.|+..++..... ..++.....++||||+.|+.+...+| .|.+||+..
T Consensus 228 i~~~dl~~g~~~~l~---~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~ 279 (435)
T PRK05137 228 VYLLDLETGQRELVG---NFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRS 279 (435)
T ss_pred EEEEECCCCcEEEee---cCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCC
Confidence 455666654433222 23344557789999999876543344 466777754
No 46
>PTZ00420 coronin; Provisional
Probab=98.65 E-value=2.2e-06 Score=85.80 Aligned_cols=118 Identities=12% Similarity=0.099 Sum_probs=74.3
Q ss_pred CceEEEEEcCC-CCEEEEEeCCCCeEEEEEcCCCCCc-ee----eeEEeecccccCCCceEEecCCCCcCCCCcceeecc
Q psy11412 33 AMVTDILISLD-DRYLYTSNWMHGDIRQYDIRDTAHP-VL----VGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGR 106 (290)
Q Consensus 33 ~~p~~va~SpD-Gr~Lyva~~~~g~V~v~dv~d~~~~-~~----~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 106 (290)
+.+..++|+|+ +.+|++++ .+++|++||+...... .. +..+ .+ +
T Consensus 75 ~~V~~lafsP~~~~lLASgS-~DgtIrIWDi~t~~~~~~~i~~p~~~L-~g----------------------------H 124 (568)
T PTZ00420 75 SSILDLQFNPCFSEILASGS-EDLTIRVWEIPHNDESVKEIKDPQCIL-KG----------------------------H 124 (568)
T ss_pred CCEEEEEEcCCCCCEEEEEe-CCCeEEEEECCCCCccccccccceEEe-ec----------------------------C
Confidence 35789999997 67777665 5899999999653211 10 0000 01 0
Q ss_pred ccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEE
Q psy11412 107 RFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDIL 186 (290)
Q Consensus 107 ~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~ 186 (290)
......++|||++..+.++... ++.+.+||+.. .+.+.. +..+.....+.
T Consensus 125 --~~~V~sVaf~P~g~~iLaSgS~---------------DgtIrIWDl~t---g~~~~~----------i~~~~~V~Sls 174 (568)
T PTZ00420 125 --KKKISIIDWNPMNYYIMCSSGF---------------DSFVNIWDIEN---EKRAFQ----------INMPKKLSSLK 174 (568)
T ss_pred --CCcEEEEEECCCCCeEEEEEeC---------------CCeEEEEECCC---CcEEEE----------EecCCcEEEEE
Confidence 1457889999999987655431 22344454432 111111 11123467899
Q ss_pred EccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 187 ISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 187 ~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
|+|||+.|++++ .++.|.+||+..
T Consensus 175 wspdG~lLat~s-~D~~IrIwD~Rs 198 (568)
T PTZ00420 175 WNIKGNLLSGTC-VGKHMHIIDPRK 198 (568)
T ss_pred ECCCCCEEEEEe-cCCEEEEEECCC
Confidence 999999998887 578999999853
No 47
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.65 E-value=8.7e-07 Score=85.84 Aligned_cols=175 Identities=17% Similarity=0.100 Sum_probs=87.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCC--CeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMH--GDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~--g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
...+.++||||++|+.+.+.+ ..|.+||+.. +..+.+... . ..
T Consensus 205 ~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~t-g~~~~l~~~--~--------------------------------g~ 249 (429)
T PRK01742 205 PLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRS-GARKVVASF--R--------------------------------GH 249 (429)
T ss_pred ccccceEcCCCCEEEEEEecCCCcEEEEEeCCC-CceEEEecC--C--------------------------------Cc
Confidence 456789999999987765433 4799999864 223333210 0 11
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDD 191 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDG 191 (290)
-..++|||||++|+++....+.++.+. ++... . .+..+.. .........+||||
T Consensus 250 ~~~~~wSPDG~~La~~~~~~g~~~Iy~-------------~d~~~---~-~~~~lt~---------~~~~~~~~~wSpDG 303 (429)
T PRK01742 250 NGAPAFSPDGSRLAFASSKDGVLNIYV-------------MGANG---G-TPSQLTS---------GAGNNTEPSWSPDG 303 (429)
T ss_pred cCceeECCCCCEEEEEEecCCcEEEEE-------------EECCC---C-CeEeecc---------CCCCcCCEEECCCC
Confidence 224799999999988653222121111 11100 0 1111000 01123457899999
Q ss_pred CEEEEEeCCCCcEEEEEecCCCC-ceEeeEEeeCceecCCCc-e--------EEecCCCCCCCCCcceeecccccCCcce
Q psy11412 192 RYLYTSNWMHGDIRQYDIRDTAH-PVLVGQIFLGGKIQSDSG-V--------TVIDDPELDKQPDPVIIKGRRFTGSSQM 261 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d~~~-~~~v~~i~~Gg~~~~~~~-v--------~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 261 (290)
++|+.+...++...+|++...+. .+++........+++++. + .++|..+.. . ..+... ..-..
T Consensus 304 ~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~~~~~~~SpDG~~ia~~~~~~i~~~Dl~~g~--~--~~lt~~---~~~~~ 376 (429)
T PRK01742 304 QSILFTSDRSGSPQVYRMSASGGGASLVGGRGYSAQISADGKTLVMINGDNVVKQDLTSGS--T--EVLSST---FLDES 376 (429)
T ss_pred CEEEEEECCCCCceEEEEECCCCCeEEecCCCCCccCCCCCCEEEEEcCCCEEEEECCCCC--e--EEecCC---CCCCC
Confidence 98775443456677787743221 222211000112333333 2 223322110 0 011111 12367
Q ss_pred EEEccCCCEEEEEcC
Q psy11412 262 FQLSLDGKRIYVSSS 276 (290)
Q Consensus 262 ~a~sPDG~~L~Van~ 276 (290)
..|+|||++|+.++.
T Consensus 377 ~~~sPdG~~i~~~s~ 391 (429)
T PRK01742 377 PSISPNGIMIIYSST 391 (429)
T ss_pred ceECCCCCEEEEEEc
Confidence 899999999998865
No 48
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.61 E-value=3.6e-06 Score=81.60 Aligned_cols=31 Identities=10% Similarity=0.079 Sum_probs=23.6
Q ss_pred ceEEEEEcCCCCEEEEEeC--CCCeEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNW--MHGDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~--~~g~V~v~dv~d 64 (290)
...+.++||||++|+...+ +...|.+||+..
T Consensus 203 ~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~ 235 (435)
T PRK05137 203 LVLTPRFSPNRQEITYMSYANGRPRVYLLDLET 235 (435)
T ss_pred CeEeeEECCCCCEEEEEEecCCCCEEEEEECCC
Confidence 5678899999998766543 346899999864
No 49
>KOG0272|consensus
Probab=98.60 E-value=2.4e-07 Score=87.07 Aligned_cols=113 Identities=17% Similarity=0.185 Sum_probs=72.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
-+..++|.|+|++|.++++ +-+=++||+.....+-.. -|+ -.+..
T Consensus 263 RVs~VafHPsG~~L~Tasf-D~tWRlWD~~tk~ElL~Q----EGH------------------------------s~~v~ 307 (459)
T KOG0272|consen 263 RVSRVAFHPSGKFLGTASF-DSTWRLWDLETKSELLLQ----EGH------------------------------SKGVF 307 (459)
T ss_pred hheeeeecCCCceeeeccc-ccchhhcccccchhhHhh----ccc------------------------------ccccc
Confidence 3457999999999999987 679999999763221111 121 15788
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.++|+|||..+. ++.+.+. + . +||.... +..+. ..+ .-....+|.|||+|-.
T Consensus 308 ~iaf~~DGSL~~-tGGlD~~------------~-R--vWDlRtg--r~im~------L~g----H~k~I~~V~fsPNGy~ 359 (459)
T KOG0272|consen 308 SIAFQPDGSLAA-TGGLDSL------------G-R--VWDLRTG--RCIMF------LAG----HIKEILSVAFSPNGYH 359 (459)
T ss_pred eeEecCCCceee-ccCccch------------h-h--eeecccC--cEEEE------ecc----cccceeeEeECCCceE
Confidence 899999998655 4443210 0 0 1222210 11111 011 1135788999999988
Q ss_pred EEEEeCCCCcEEEEEec
Q psy11412 194 LYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~ 210 (290)
|.++. ++|++.|||+.
T Consensus 360 lATgs-~Dnt~kVWDLR 375 (459)
T KOG0272|consen 360 LATGS-SDNTCKVWDLR 375 (459)
T ss_pred EeecC-CCCcEEEeeec
Confidence 87776 89999999995
No 50
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.60 E-value=2.4e-06 Score=82.84 Aligned_cols=27 Identities=19% Similarity=0.174 Sum_probs=20.8
Q ss_pred EEEEccCCCEEEEEeCCCC--cEEEEEec
Q psy11412 184 DILISLDDRYLYTSNWMHG--DIRQYDIR 210 (290)
Q Consensus 184 ~i~~SpDGr~Lyvs~r~~~--~V~v~Dv~ 210 (290)
.+++||||+++|.+...++ .|.+||+.
T Consensus 340 ~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~ 368 (433)
T PRK04922 340 RASVSPDGKKIAMVHGSGGQYRIAVMDLS 368 (433)
T ss_pred CEEECCCCCEEEEEECCCCceeEEEEECC
Confidence 5789999999988764332 58888874
No 51
>KOG2055|consensus
Probab=98.59 E-value=6.9e-07 Score=84.86 Aligned_cols=169 Identities=13% Similarity=0.177 Sum_probs=103.0
Q ss_pred CCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCC
Q psy11412 18 PAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQ 97 (290)
Q Consensus 18 ~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~ 97 (290)
.+++..... ++.+.+.+++||.||+.|++++. .|.|.+||+.. +.++..+.-.|
T Consensus 333 kT~eli~s~---KieG~v~~~~fsSdsk~l~~~~~-~GeV~v~nl~~---~~~~~rf~D~G------------------- 386 (514)
T KOG2055|consen 333 KTKELITSF---KIEGVVSDFTFSSDSKELLASGG-TGEVYVWNLRQ---NSCLHRFVDDG------------------- 386 (514)
T ss_pred hhhhhhhee---eeccEEeeEEEecCCcEEEEEcC-CceEEEEecCC---cceEEEEeecC-------------------
Confidence 345555544 89999999999999999998875 78999999965 34443322221
Q ss_pred CCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccC
Q psy11412 98 PDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYP 177 (290)
Q Consensus 98 ~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 177 (290)
+-+-.+++.|++|++|++.+.- +.+-.+.+..... . ..++++.++.. +
T Consensus 387 -----------~v~gts~~~S~ng~ylA~GS~~-GiVNIYd~~s~~~--------s----~~PkPik~~dN-------L- 434 (514)
T KOG2055|consen 387 -----------SVHGTSLCISLNGSYLATGSDS-GIVNIYDGNSCFA--------S----TNPKPIKTVDN-------L- 434 (514)
T ss_pred -----------ccceeeeeecCCCceEEeccCc-ceEEEeccchhhc--------c----CCCCchhhhhh-------h-
Confidence 1234569999999988875541 1111111000000 0 01222222111 0
Q ss_pred CCCceeEEEEccCCCEEEEEeCC-CCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeeccccc
Q psy11412 178 ARSMVTDILISLDDRYLYTSNWM-HGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFT 256 (290)
Q Consensus 178 ~~~~~~~i~~SpDGr~Lyvs~r~-~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 256 (290)
......|.|++|+..|..+.+. .+.+.+..+.. ..+...+|+-+. + =
T Consensus 435 -tt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS---~TVFsNfP~~n~---------------------------~-v 482 (514)
T KOG2055|consen 435 -TTAITSLQFNHDAQILAIASRVKKNALRLVHVPS---CTVFSNFPTSNT---------------------------K-V 482 (514)
T ss_pred -heeeeeeeeCcchhhhhhhhhccccceEEEeccc---eeeeccCCCCCC---------------------------c-c
Confidence 1346779999999999865544 57788776632 222333333220 0 0
Q ss_pred CCcceEEEccCCCEEEEEcC
Q psy11412 257 GSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 257 ~~P~~~a~sPDG~~L~Van~ 276 (290)
++++.|+|||.|.+|+|+|.
T Consensus 483 g~vtc~aFSP~sG~lAvGNe 502 (514)
T KOG2055|consen 483 GHVTCMAFSPNSGYLAVGNE 502 (514)
T ss_pred cceEEEEecCCCceEEeecC
Confidence 37999999999999999998
No 52
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.59 E-value=4.2e-06 Score=81.16 Aligned_cols=31 Identities=10% Similarity=-0.020 Sum_probs=22.6
Q ss_pred ceEEEEEcCCCCEEEEEeC--CCCeEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNW--MHGDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~--~~g~V~v~dv~d 64 (290)
.....++||||++|+.... +...|.+|++..
T Consensus 200 ~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~ 232 (429)
T PRK03629 200 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN 232 (429)
T ss_pred ceeeeEEcCCCCEEEEEEecCCCcEEEEEECCC
Confidence 4568899999998875533 245788888854
No 53
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.58 E-value=2.1e-06 Score=83.80 Aligned_cols=50 Identities=22% Similarity=0.097 Sum_probs=28.7
Q ss_pred EEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCe--EEEEEcCC
Q psy11412 12 DKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGD--IRQYDIRD 64 (290)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~--V~v~dv~d 64 (290)
-.++|+..++..... ..++.....++||||++|+.+...+|. |.++|+..
T Consensus 244 L~~~dl~tg~~~~lt---~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~t 295 (448)
T PRK04792 244 IFVQDIYTQVREKVT---SFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIAT 295 (448)
T ss_pred EEEEECCCCCeEEec---CCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCC
Confidence 345566544432211 233334467899999999876434454 66677653
No 54
>KOG0263|consensus
Probab=98.56 E-value=6.7e-07 Score=89.33 Aligned_cols=151 Identities=19% Similarity=0.272 Sum_probs=94.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
-++++.|+||.++|..+. .+.+|++|.+..-. .+ .++-||. ..+.
T Consensus 453 PVyg~sFsPd~rfLlScS-ED~svRLWsl~t~s---~~-V~y~GH~------------------------------~PVw 497 (707)
T KOG0263|consen 453 PVYGCSFSPDRRFLLSCS-EDSSVRLWSLDTWS---CL-VIYKGHL------------------------------APVW 497 (707)
T ss_pred ceeeeeecccccceeecc-CCcceeeeecccce---eE-EEecCCC------------------------------ccee
Confidence 577999999999997655 58999999996532 11 1122321 2346
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.+.|+|-|-+++.++- |. +-..|.... -.+++ .+.+ .-+...-+.|+|+..+
T Consensus 498 dV~F~P~GyYFatas~---------------D~-tArLWs~d~---~~PlR-----ifag----hlsDV~cv~FHPNs~Y 549 (707)
T KOG0263|consen 498 DVQFAPRGYYFATASH---------------DQ-TARLWSTDH---NKPLR-----IFAG----HLSDVDCVSFHPNSNY 549 (707)
T ss_pred eEEecCCceEEEecCC---------------Cc-eeeeeeccc---CCchh-----hhcc----cccccceEEECCcccc
Confidence 6889999976665432 11 112232221 11111 1111 1123444899999999
Q ss_pred EEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEE
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYV 273 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~V 273 (290)
++... .+.+|++||+.. +... ++-+|.. +....++|||+|++|+.
T Consensus 550 ~aTGS-sD~tVRlWDv~~-G~~V---RiF~GH~------------------------------~~V~al~~Sp~Gr~LaS 594 (707)
T KOG0263|consen 550 VATGS-SDRTVRLWDVST-GNSV---RIFTGHK------------------------------GPVTALAFSPCGRYLAS 594 (707)
T ss_pred cccCC-CCceEEEEEcCC-CcEE---EEecCCC------------------------------CceEEEEEcCCCceEee
Confidence 88775 688999999964 2222 2234542 13588999999999999
Q ss_pred EcC--CCCCCC
Q psy11412 274 SSS--LFSPWD 282 (290)
Q Consensus 274 an~--~~~~~~ 282 (290)
+.. .+.-||
T Consensus 595 g~ed~~I~iWD 605 (707)
T KOG0263|consen 595 GDEDGLIKIWD 605 (707)
T ss_pred cccCCcEEEEE
Confidence 876 666676
No 55
>KOG0272|consensus
Probab=98.56 E-value=1.3e-06 Score=82.13 Aligned_cols=175 Identities=17% Similarity=0.226 Sum_probs=103.0
Q ss_pred eEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceE
Q psy11412 35 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQM 114 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~ 114 (290)
...+.||.|++.|+++++ +|.+.||...+. ..+..+ -|+ .+..-.
T Consensus 178 is~~~fS~ds~~laT~sw-sG~~kvW~~~~~---~~~~~l-~gH------------------------------~~~v~~ 222 (459)
T KOG0272|consen 178 ISGCSFSRDSKHLATGSW-SGLVKVWSVPQC---NLLQTL-RGH------------------------------TSRVGA 222 (459)
T ss_pred ceeeEeecCCCeEEEeec-CCceeEeecCCc---ceeEEE-ecc------------------------------ccceee
Confidence 456889999999999988 789999998663 222211 121 034556
Q ss_pred EEEccC--CCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 115 FQLSLD--GKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 115 vafsPd--G~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
+.|||. +..++.++. || .+..|+... ...+. .+++ ....+..++|+|+|+
T Consensus 223 ~~fhP~~~~~~lat~s~---------------Dg-tvklw~~~~---e~~l~-----~l~g----H~~RVs~VafHPsG~ 274 (459)
T KOG0272|consen 223 AVFHPVDSDLNLATASA---------------DG-TVKLWKLSQ---ETPLQ-----DLEG----HLARVSRVAFHPSGK 274 (459)
T ss_pred EEEccCCCccceeeecc---------------CC-ceeeeccCC---Ccchh-----hhhc----chhhheeeeecCCCc
Confidence 899998 556665443 23 333333321 12222 1122 124567899999999
Q ss_pred EEEEEeCCCCcEEEEEecCCC-------CceEeeEEeeCceecCCCc----------eEEecCCCCCCCCCcceeecccc
Q psy11412 193 YLYTSNWMHGDIRQYDIRDTA-------HPVLVGQIFLGGKIQSDSG----------VTVIDDPELDKQPDPVIIKGRRF 255 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d~~-------~~~~v~~i~~Gg~~~~~~~----------v~~~~~~~~~~~~~~~~~~~~~~ 255 (290)
||.+++ .+.+=++||+.... +-+-+-.+ .+..||. =+|||...-. -.-.+.| +
T Consensus 275 ~L~Tas-fD~tWRlWD~~tk~ElL~QEGHs~~v~~i----af~~DGSL~~tGGlD~~~RvWDlRtgr---~im~L~g-H- 344 (459)
T KOG0272|consen 275 FLGTAS-FDSTWRLWDLETKSELLLQEGHSKGVFSI----AFQPDGSLAATGGLDSLGRVWDLRTGR---CIMFLAG-H- 344 (459)
T ss_pred eeeecc-cccchhhcccccchhhHhhccccccccee----EecCCCceeeccCccchhheeecccCc---EEEEecc-c-
Confidence 999999 68889999996421 11111111 1122333 3445543211 0001111 1
Q ss_pred cCCcceEEEccCCCEEEEEcC--CCCCCC
Q psy11412 256 TGSSQMFQLSLDGKRIYVSSS--LFSPWD 282 (290)
Q Consensus 256 ~~~P~~~a~sPDG~~L~Van~--~~~~~~ 282 (290)
-+....|+|||+|-.|+.+++ +.+.||
T Consensus 345 ~k~I~~V~fsPNGy~lATgs~Dnt~kVWD 373 (459)
T KOG0272|consen 345 IKEILSVAFSPNGYHLATGSSDNTCKVWD 373 (459)
T ss_pred ccceeeEeECCCceEEeecCCCCcEEEee
Confidence 023689999999999999877 778887
No 56
>KOG0291|consensus
Probab=98.56 E-value=4e-06 Score=83.88 Aligned_cols=190 Identities=18% Similarity=0.238 Sum_probs=105.6
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
-+.+++|+|+|..||++.| +.+|++||+-+... ...++.. .+..-
T Consensus 480 PVs~l~f~~~~~~LaS~SW-DkTVRiW~if~s~~--~vEtl~i--------------------------------~sdvl 524 (893)
T KOG0291|consen 480 PVSGLSFSPDGSLLASGSW-DKTVRIWDIFSSSG--TVETLEI--------------------------------RSDVL 524 (893)
T ss_pred cceeeEEccccCeEEeccc-cceEEEEEeeccCc--eeeeEee--------------------------------cccee
Confidence 3567999999999999988 78999999965211 1111111 13556
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccC-----CCCceeEEEEc
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYP-----ARSMVTDILIS 188 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~-----~~~~~~~i~~S 188 (290)
.++|+|||+.|.|+.- .+++..+.. +.+..+..++. ++.+. .+....-.+. .+..-..|.+|
T Consensus 525 ~vsfrPdG~elaVaTl-dgqItf~d~----~~~~q~~~Idg-----rkD~~---~gR~~~D~~ta~~sa~~K~Ftti~yS 591 (893)
T KOG0291|consen 525 AVSFRPDGKELAVATL-DGQITFFDI----KEAVQVGSIDG-----RKDLS---GGRKETDRITAENSAKGKTFTTICYS 591 (893)
T ss_pred EEEEcCCCCeEEEEEe-cceEEEEEh----hhceeeccccc-----hhhcc---ccccccceeehhhcccCCceEEEEEc
Confidence 7999999999999754 222222111 11111111111 00000 0000000000 11245679999
Q ss_pred cCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeC--ce------------ecCCCceEEecCCCCCC-----CCCcce
Q psy11412 189 LDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG--GK------------IQSDSGVTVIDDPELDK-----QPDPVI 249 (290)
Q Consensus 189 pDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~G--g~------------~~~~~~v~~~~~~~~~~-----~~~~~~ 249 (290)
+||..+.++. ..+.|-+||+.+ ..++....+- .+ ...-|++-++|....+. .+.|-.
T Consensus 592 aDG~~IlAgG-~sn~iCiY~v~~---~vllkkfqiS~N~sLdg~~efln~rkmtEfG~~~LiD~e~~~~e~~i~~~lpG~ 667 (893)
T KOG0291|consen 592 ADGKCILAGG-ESNSICIYDVPE---GVLLKKFQISDNRSLDGVLEFLNRRKMTEFGNMDLIDTEESDLEGRIDIALPGV 667 (893)
T ss_pred CCCCEEEecC-CcccEEEEECch---hheeeeEEeccccchhHHHHHhccccccccCCccccccccccccccccccCCcc
Confidence 9999998887 688999999964 2333333221 11 15566777777532221 222212
Q ss_pred eecccccC-------CcceEEEccCCCEEEEEcC
Q psy11412 250 IKGRRFTG-------SSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 250 ~~~~~~~~-------~P~~~a~sPDG~~L~Van~ 276 (290)
.+|- .+. ....+.|||.|+..|+|..
T Consensus 668 ~~gd-lssRr~rpeIrv~sv~fsPtgraFAaatT 700 (893)
T KOG0291|consen 668 QRGD-LSSRRFRPEIRVTSVQFSPTGRAFAAATT 700 (893)
T ss_pred ccCC-ccccccCceEEEEEEEECCCcCeeeeecc
Confidence 1221 111 1468999999999998865
No 57
>KOG0282|consensus
Probab=98.56 E-value=1.1e-06 Score=83.95 Aligned_cols=179 Identities=12% Similarity=0.131 Sum_probs=114.1
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+..+.||.+|+.+.++.+ +..|.+||++. ++++....++ .-|.
T Consensus 260 ~Vrd~~~s~~g~~fLS~sf-D~~lKlwDtET---G~~~~~f~~~--------------------------------~~~~ 303 (503)
T KOG0282|consen 260 PVRDASFNNCGTSFLSASF-DRFLKLWDTET---GQVLSRFHLD--------------------------------KVPT 303 (503)
T ss_pred hhhhhhccccCCeeeeeec-ceeeeeecccc---ceEEEEEecC--------------------------------CCce
Confidence 3557899999999998886 88999999865 4555544443 4677
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
-+.|+||+..++++... + +.+..||... ...++..-. .-.....|.|=++|++
T Consensus 304 cvkf~pd~~n~fl~G~s--------------d-~ki~~wDiRs---~kvvqeYd~---------hLg~i~~i~F~~~g~r 356 (503)
T KOG0282|consen 304 CVKFHPDNQNIFLVGGS--------------D-KKIRQWDIRS---GKVVQEYDR---------HLGAILDITFVDEGRR 356 (503)
T ss_pred eeecCCCCCcEEEEecC--------------C-CcEEEEeccc---hHHHHHHHh---------hhhheeeeEEccCCce
Confidence 89999999777777652 1 2333344322 222221110 0023567899999999
Q ss_pred EEEEeCCCCcEEEEEecCCCCceEe-----------eEEeeCcee---cCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAHPVLV-----------GQIFLGGKI---QSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~~~~v-----------~~i~~Gg~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
...|. .+.++.+|+..-+...+.+ +.-|-++-+ +-|+.+.+......-.....+.++|....|.+
T Consensus 357 FissS-Ddks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys 435 (503)
T KOG0282|consen 357 FISSS-DDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYS 435 (503)
T ss_pred Eeeec-cCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCce
Confidence 77666 7889999998543221211 111222222 22333444443332234445578888888999
Q ss_pred ceEEEccCCCEEEEEcC
Q psy11412 260 QMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~ 276 (290)
-.+.|||||++|...+.
T Consensus 436 ~~v~fSpDG~~l~SGds 452 (503)
T KOG0282|consen 436 CQVDFSPDGRTLCSGDS 452 (503)
T ss_pred eeEEEcCCCCeEEeecC
Confidence 99999999999999887
No 58
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.55 E-value=4e-06 Score=80.92 Aligned_cols=49 Identities=14% Similarity=0.050 Sum_probs=28.8
Q ss_pred EEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCC--eEEEEEcCC
Q psy11412 13 KVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHG--DIRQYDIRD 64 (290)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g--~V~v~dv~d 64 (290)
.+.++..++.+... ...+.....++||||++|+.+...+| .|.+||+..
T Consensus 226 ~~~~l~~g~~~~l~---~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~ 276 (430)
T PRK00178 226 FVQNLDTGRREQIT---NFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLAS 276 (430)
T ss_pred EEEECCCCCEEEcc---CCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCC
Confidence 34555544433222 23334456889999999976543333 577788754
No 59
>KOG0263|consensus
Probab=98.54 E-value=5.2e-07 Score=90.11 Aligned_cols=151 Identities=21% Similarity=0.305 Sum_probs=95.7
Q ss_pred eEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceE
Q psy11412 35 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQM 114 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~ 114 (290)
++.+.|+|-|-|.+++ .++.+-++|..+. ..|.++ ..|+. +-...
T Consensus 496 VwdV~F~P~GyYFata-s~D~tArLWs~d~-~~PlRi---faghl------------------------------sDV~c 540 (707)
T KOG0263|consen 496 VWDVQFAPRGYYFATA-SHDQTARLWSTDH-NKPLRI---FAGHL------------------------------SDVDC 540 (707)
T ss_pred eeeEEecCCceEEEec-CCCceeeeeeccc-CCchhh---hcccc------------------------------cccce
Confidence 4578999999998877 4689999999854 233332 22321 45677
Q ss_pred EEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCEE
Q psy11412 115 FQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYL 194 (290)
Q Consensus 115 vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~L 194 (290)
+.|||+..+++ ++- .+.++-.||+.. ...++. +.| .......++|||+||+|
T Consensus 541 v~FHPNs~Y~a--TGS--------------sD~tVRlWDv~~---G~~VRi-----F~G----H~~~V~al~~Sp~Gr~L 592 (707)
T KOG0263|consen 541 VSFHPNSNYVA--TGS--------------SDRTVRLWDVST---GNSVRI-----FTG----HKGPVTALAFSPCGRYL 592 (707)
T ss_pred EEECCcccccc--cCC--------------CCceEEEEEcCC---CcEEEE-----ecC----CCCceEEEEEcCCCceE
Confidence 99999998554 430 122333344432 111221 112 12456789999999999
Q ss_pred EEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEEE
Q psy11412 195 YTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVS 274 (290)
Q Consensus 195 yvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Va 274 (290)
..+. .++.|.+||+.. .+++.+. .|. .+....+.||.||..|+++
T Consensus 593 aSg~-ed~~I~iWDl~~---~~~v~~l-~~H------------------------------t~ti~SlsFS~dg~vLasg 637 (707)
T KOG0263|consen 593 ASGD-EDGLIKIWDLAN---GSLVKQL-KGH------------------------------TGTIYSLSFSRDGNVLASG 637 (707)
T ss_pred eecc-cCCcEEEEEcCC---Ccchhhh-hcc------------------------------cCceeEEEEecCCCEEEec
Confidence 8877 789999999964 2332211 011 1246779999999999998
Q ss_pred cC--CCCCCCc
Q psy11412 275 SS--LFSPWDK 283 (290)
Q Consensus 275 n~--~~~~~~~ 283 (290)
.+ ..-.||.
T Consensus 638 g~DnsV~lWD~ 648 (707)
T KOG0263|consen 638 GADNSVRLWDL 648 (707)
T ss_pred CCCCeEEEEEc
Confidence 76 4555653
No 60
>PRK01742 tolB translocation protein TolB; Provisional
Probab=98.54 E-value=1.7e-06 Score=83.72 Aligned_cols=31 Identities=16% Similarity=0.047 Sum_probs=22.0
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEc
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDI 62 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv 62 (290)
.++...+++||||++|+.+...+|.+.+|.+
T Consensus 247 ~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~ 277 (429)
T PRK01742 247 RGHNGAPAFSPDGSRLAFASSKDGVLNIYVM 277 (429)
T ss_pred CCccCceeECCCCCEEEEEEecCCcEEEEEE
Confidence 3444568999999999887545676666644
No 61
>KOG0318|consensus
Probab=98.54 E-value=1.4e-05 Score=77.27 Aligned_cols=196 Identities=15% Similarity=0.226 Sum_probs=110.8
Q ss_pred eeEEEEEecCCCccCCCCCCC-----C-CCC---ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCcee--------e
Q psy11412 9 YKADKVIDIPAKQVQGYPGGD-----K-VPA---MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVL--------V 71 (290)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~-----~-v~~---~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~--------~ 71 (290)
||.+..|-+.-+....+.-.. . +.+ ....++++|||++||++++ +|.|.-|++.....-++ +
T Consensus 288 Wqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~Sgsy-DG~I~~W~~~~g~~~~~~g~~h~nqI 366 (603)
T KOG0318|consen 288 WQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSY-DGHINSWDSGSGTSDRLAGKGHTNQI 366 (603)
T ss_pred EeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeecc-CceEEEEecCCccccccccccccceE
Confidence 666666666544333322000 0 222 5678999999999998887 89999999875332222 1
Q ss_pred eEEeecc--c---ccCCCceEEecCC--CCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccC
Q psy11412 72 GQIFLGG--K---IQSDSGVTVIDDP--ELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVK 144 (290)
Q Consensus 72 ~~i~~g~--~---~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~ 144 (290)
..+.+.. . .+-+.++.+++.. ..+... -...|..|..++..+||.++.+++.
T Consensus 367 ~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~------~~~lg~QP~~lav~~d~~~avv~~~--------------- 425 (603)
T KOG0318|consen 367 KGMAASESGELFTIGWDDTLRVISLKDNGYTKSE------VVKLGSQPKGLAVLSDGGTAVVACI--------------- 425 (603)
T ss_pred EEEeecCCCcEEEEecCCeEEEEecccCcccccc------eeecCCCceeEEEcCCCCEEEEEec---------------
Confidence 1111110 0 0012223333211 111110 0123578999999999999999876
Q ss_pred CCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeC
Q psy11412 145 TDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 224 (290)
Q Consensus 145 ~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~G 224 (290)
...+. ++ + .+.+..+ +.+-.+..++++|||.++.+.. .++.|.+|.+...+.......+
T Consensus 426 -~~iv~-l~--~---~~~~~~~----------~~~y~~s~vAv~~~~~~vaVGG-~Dgkvhvysl~g~~l~ee~~~~--- 484 (603)
T KOG0318|consen 426 -SDIVL-LQ--D---QTKVSSI----------PIGYESSAVAVSPDGSEVAVGG-QDGKVHVYSLSGDELKEEAKLL--- 484 (603)
T ss_pred -CcEEE-Ee--c---CCcceee----------ccccccceEEEcCCCCEEEEec-ccceEEEEEecCCcccceeeee---
Confidence 11111 11 0 0111111 1122456799999999999998 5778999998642211111111
Q ss_pred ceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEEEcC
Q psy11412 225 GKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 225 g~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~ 276 (290)
+|+ +-+..+++||||++|+++..
T Consensus 485 --------------------~h~---------a~iT~vaySpd~~yla~~Da 507 (603)
T KOG0318|consen 485 --------------------EHR---------AAITDVAYSPDGAYLAAGDA 507 (603)
T ss_pred --------------------ccc---------CCceEEEECCCCcEEEEecc
Confidence 111 24788999999999999865
No 62
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.53 E-value=6.6e-06 Score=80.31 Aligned_cols=31 Identities=23% Similarity=0.108 Sum_probs=21.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCC--eEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHG--DIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g--~V~v~dv~d 64 (290)
......+||||++|+.+...++ .|.++|+..
T Consensus 219 ~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~t 251 (448)
T PRK04792 219 PLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYT 251 (448)
T ss_pred cccCceECCCCCEEEEEEecCCCcEEEEEECCC
Confidence 3456799999998876544333 577888754
No 63
>KOG0645|consensus
Probab=98.51 E-value=1.9e-05 Score=70.89 Aligned_cols=159 Identities=18% Similarity=0.234 Sum_probs=102.1
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+..+|+||.|++|+++.+ +.++.+|.-.+ +.-+.+..+..+ -..+-
T Consensus 63 sVRsvAwsp~g~~La~aSF-D~t~~Iw~k~~-~efecv~~lEGH-------------------------------EnEVK 109 (312)
T KOG0645|consen 63 SVRSVAWSPHGRYLASASF-DATVVIWKKED-GEFECVATLEGH-------------------------------ENEVK 109 (312)
T ss_pred eeeeeeecCCCcEEEEeec-cceEEEeecCC-CceeEEeeeecc-------------------------------cccee
Confidence 5778999999999998886 78999998654 344555433221 14567
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.++||++|++|+..+...+.|-.... .++.+ +... .+. +....+-.+.++|-.-.
T Consensus 110 ~Vaws~sG~~LATCSRDKSVWiWe~d-----eddEf---ec~a-----VL~------------~HtqDVK~V~WHPt~dl 164 (312)
T KOG0645|consen 110 CVAWSASGNYLATCSRDKSVWIWEID-----EDDEF---ECIA-----VLQ------------EHTQDVKHVIWHPTEDL 164 (312)
T ss_pred EEEEcCCCCEEEEeeCCCeEEEEEec-----CCCcE---EEEe-----eec------------cccccccEEEEcCCcce
Confidence 79999999999998874444422111 11111 1111 010 01123456899998888
Q ss_pred EEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEE
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYV 273 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~V 273 (290)
|+... .+|+|.+|+-.+...-..++++ ++. .+....++|+|.|.+|..
T Consensus 165 L~S~S-YDnTIk~~~~~~dddW~c~~tl--~g~-----------------------------~~TVW~~~F~~~G~rl~s 212 (312)
T KOG0645|consen 165 LFSCS-YDNTIKVYRDEDDDDWECVQTL--DGH-----------------------------ENTVWSLAFDNIGSRLVS 212 (312)
T ss_pred eEEec-cCCeEEEEeecCCCCeeEEEEe--cCc-----------------------------cceEEEEEecCCCceEEE
Confidence 87776 8999999987544444555544 221 014688999999999988
Q ss_pred EcC--CCCCCC
Q psy11412 274 SSS--LFSPWD 282 (290)
Q Consensus 274 an~--~~~~~~ 282 (290)
+.. +.+-|.
T Consensus 213 ~sdD~tv~Iw~ 223 (312)
T KOG0645|consen 213 CSDDGTVSIWR 223 (312)
T ss_pred ecCCcceEeee
Confidence 866 555554
No 64
>KOG0279|consensus
Probab=98.51 E-value=3.3e-06 Score=75.99 Aligned_cols=116 Identities=18% Similarity=0.336 Sum_probs=73.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+..+++|+||.+.+++++ ++++++||+... .... ...|+ +..+-
T Consensus 65 ~v~dv~~s~dg~~alS~sw-D~~lrlWDl~~g-~~t~---~f~GH------------------------------~~dVl 109 (315)
T KOG0279|consen 65 FVSDVVLSSDGNFALSASW-DGTLRLWDLATG-ESTR---RFVGH------------------------------TKDVL 109 (315)
T ss_pred EecceEEccCCceEEeccc-cceEEEEEecCC-cEEE---EEEec------------------------------CCceE
Confidence 3447899999999999888 899999999753 2221 23342 15678
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC-
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR- 192 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr- 192 (290)
.++||||.+.+...+. +.++..+++... . ..++.. + .+..++..+.|||...
T Consensus 110 sva~s~dn~qivSGSr----------------DkTiklwnt~g~---c-k~t~~~----~---~~~~WVscvrfsP~~~~ 162 (315)
T KOG0279|consen 110 SVAFSTDNRQIVSGSR----------------DKTIKLWNTLGV---C-KYTIHE----D---SHREWVSCVRFSPNESN 162 (315)
T ss_pred EEEecCCCceeecCCC----------------cceeeeeeeccc---E-EEEEec----C---CCcCcEEEEEEcCCCCC
Confidence 8999999998876443 223444444320 0 000000 0 0134688899999963
Q ss_pred EEEEEeCCCCcEEEEEecC
Q psy11412 193 YLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d 211 (290)
...++.--+.+|.+||+..
T Consensus 163 p~Ivs~s~DktvKvWnl~~ 181 (315)
T KOG0279|consen 163 PIIVSASWDKTVKVWNLRN 181 (315)
T ss_pred cEEEEccCCceEEEEccCC
Confidence 3334443588999999853
No 65
>KOG1446|consensus
Probab=98.50 E-value=5.6e-06 Score=75.42 Aligned_cols=123 Identities=15% Similarity=0.204 Sum_probs=73.7
Q ss_pred CCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCC-CCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeecccc
Q psy11412 30 KVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDT-AHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRF 108 (290)
Q Consensus 30 ~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~-~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 108 (290)
.+.+.| -+|++|.|=.+++++. .+.|.+||++.- ..|-.+-. ++ + ..
T Consensus 139 ~~~~~p-i~AfDp~GLifA~~~~-~~~IkLyD~Rs~dkgPF~tf~--i~-------------~---------------~~ 186 (311)
T KOG1446|consen 139 NLSGRP-IAAFDPEGLIFALANG-SELIKLYDLRSFDKGPFTTFS--IT-------------D---------------ND 186 (311)
T ss_pred ecCCCc-ceeECCCCcEEEEecC-CCeEEEEEecccCCCCceeEc--cC-------------C---------------CC
Confidence 444433 4589999999988875 459999999752 22222211 11 0 00
Q ss_pred CCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCC-CCceeEEEE
Q psy11412 109 TGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPA-RSMVTDILI 187 (290)
Q Consensus 109 g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~-~~~~~~i~~ 187 (290)
-..-.+|.||||||.+-++.+. +...++|..+-. .+.+ +.+ .+. ...+.+..|
T Consensus 187 ~~ew~~l~FS~dGK~iLlsT~~----------------s~~~~lDAf~G~---~~~t-----fs~--~~~~~~~~~~a~f 240 (311)
T KOG1446|consen 187 EAEWTDLEFSPDGKSILLSTNA----------------SFIYLLDAFDGT---VKST-----FSG--YPNAGNLPLSATF 240 (311)
T ss_pred ccceeeeEEcCCCCEEEEEeCC----------------CcEEEEEccCCc---Eeee-----Eee--ccCCCCcceeEEE
Confidence 1344679999999999987651 122223332210 0110 101 011 124567889
Q ss_pred ccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 188 SLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 188 SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
+|||+|+..+. ++++|.+|++.+
T Consensus 241 tPds~Fvl~gs-~dg~i~vw~~~t 263 (311)
T KOG1446|consen 241 TPDSKFVLSGS-DDGTIHVWNLET 263 (311)
T ss_pred CCCCcEEEEec-CCCcEEEEEcCC
Confidence 99999988777 899999999943
No 66
>KOG0639|consensus
Probab=98.49 E-value=2.8e-07 Score=88.37 Aligned_cols=116 Identities=16% Similarity=0.254 Sum_probs=80.2
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
+.+...+-+.||||+|.|.++ .-+|.+||+..+. +++-.++.. ++
T Consensus 465 dnyiRSckL~pdgrtLivGGe-astlsiWDLAapT-prikaelts---------------------------------sa 509 (705)
T KOG0639|consen 465 DNYIRSCKLLPDGRTLIVGGE-ASTLSIWDLAAPT-PRIKAELTS---------------------------------SA 509 (705)
T ss_pred ccceeeeEecCCCceEEeccc-cceeeeeeccCCC-cchhhhcCC---------------------------------cc
Confidence 447788999999999999987 6699999997542 333221111 22
Q ss_pred c--eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEcc
Q psy11412 112 S--QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISL 189 (290)
Q Consensus 112 P--r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~Sp 189 (290)
| ..++.|||.+.+|.... +| .+.+||+-+ ...++.++ | ...++.-|.+|+
T Consensus 510 paCyALa~spDakvcFsccs---------------dG-nI~vwDLhn---q~~Vrqfq-----G----htDGascIdis~ 561 (705)
T KOG0639|consen 510 PACYALAISPDAKVCFSCCS---------------DG-NIAVWDLHN---QTLVRQFQ-----G----HTDGASCIDISK 561 (705)
T ss_pred hhhhhhhcCCccceeeeecc---------------CC-cEEEEEccc---ceeeeccc-----C----CCCCceeEEecC
Confidence 3 34889999999997654 34 455566533 22233211 2 124567799999
Q ss_pred CCCEEEEEeCCCCcEEEEEecC
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
||..||+.. .+|+|+.||+..
T Consensus 562 dGtklWTGG-lDntvRcWDlre 582 (705)
T KOG0639|consen 562 DGTKLWTGG-LDNTVRCWDLRE 582 (705)
T ss_pred CCceeecCC-Cccceeehhhhh
Confidence 999999998 899999999853
No 67
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.49 E-value=6e-06 Score=71.69 Aligned_cols=113 Identities=17% Similarity=0.227 Sum_probs=73.1
Q ss_pred ceEEEEEcCCCCEEEEEe-CCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 34 MVTDILISLDDRYLYTSN-WMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~-~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
.++.++++|+|+.+++.. .....|.+||+. .+.+..+ + ....
T Consensus 61 ~I~~~~WsP~g~~favi~g~~~~~v~lyd~~----~~~i~~~--~-------------------------------~~~~ 103 (194)
T PF08662_consen 61 PIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK----GKKIFSF--G-------------------------------TQPR 103 (194)
T ss_pred ceEEEEECcCCCEEEEEEccCCcccEEEcCc----ccEeEee--c-------------------------------CCCc
Confidence 488999999999987774 335689999984 2333222 1 0244
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
..|.|||+|++|.+++-.. ..+.+..+|+.. ...+... +......+++|||||
T Consensus 104 n~i~wsP~G~~l~~~g~~n-------------~~G~l~~wd~~~---~~~i~~~-----------~~~~~t~~~WsPdGr 156 (194)
T PF08662_consen 104 NTISWSPDGRFLVLAGFGN-------------LNGDLEFWDVRK---KKKISTF-----------EHSDATDVEWSPDGR 156 (194)
T ss_pred eEEEECCCCCEEEEEEccC-------------CCcEEEEEECCC---CEEeecc-----------ccCcEEEEEEcCCCC
Confidence 6799999999999875310 012233344322 1222210 123467899999999
Q ss_pred EEEEEeC-----CCCcEEEEEec
Q psy11412 193 YLYTSNW-----MHGDIRQYDIR 210 (290)
Q Consensus 193 ~Lyvs~r-----~~~~V~v~Dv~ 210 (290)
+|.++.- .++.+.+|+..
T Consensus 157 ~~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 157 YLATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred EEEEEEeccceeccccEEEEEec
Confidence 9998763 37889999984
No 68
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.47 E-value=8.2e-06 Score=77.89 Aligned_cols=50 Identities=26% Similarity=0.187 Sum_probs=30.8
Q ss_pred EEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCC--eEEEEEcCC
Q psy11412 12 DKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHG--DIRQYDIRD 64 (290)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g--~V~v~dv~d 64 (290)
-.++++..++..... ...+....++++|||+.|+.+...++ .|.+|++..
T Consensus 216 i~v~d~~~g~~~~~~---~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~ 267 (417)
T TIGR02800 216 IYVQDLATGQREKVA---SFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDG 267 (417)
T ss_pred EEEEECCCCCEEEee---cCCCCccceEECCCCCEEEEEECCCCCccEEEEECCC
Confidence 456666655433222 23444566899999998876644333 577888754
No 69
>KOG1274|consensus
Probab=98.46 E-value=1.3e-05 Score=81.59 Aligned_cols=211 Identities=22% Similarity=0.293 Sum_probs=117.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCC-CCceeeeEEeeccc---cc----------CCCceEEecCCCCcCCCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDT-AHPVLVGQIFLGGK---IQ----------SDSGVTVIDDPELDKQPD 99 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~-~~~~~~~~i~~g~~---~~----------~~~~~~v~~~~~~~~~~~ 99 (290)
.-+.|+++|||.+|++++. +|.|++|+..+. ..|+.+.. .|-. +. ....|-++.-++.+. +
T Consensus 15 G~t~i~~d~~gefi~tcgs-dg~ir~~~~~sd~e~P~ti~~--~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~--~ 89 (933)
T KOG1274|consen 15 GLTLICYDPDGEFICTCGS-DGDIRKWKTNSDEEEPETIDI--SGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEE--D 89 (933)
T ss_pred ceEEEEEcCCCCEEEEecC-CCceEEeecCCcccCCchhhc--cCceeEEEeecccceEEeeccceEEEeeCCCCCc--c
Confidence 3578999999999998875 899999998654 45554321 1100 00 011111111111100 0
Q ss_pred cceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCC
Q psy11412 100 PVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPAR 179 (290)
Q Consensus 100 ~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 179 (290)
..+ .+..-..|+++|+-+|++++..++ +..+..++..|..+...++ + ..
T Consensus 90 -~iL--~Rftlp~r~~~v~g~g~~iaagsd----------------D~~vK~~~~~D~s~~~~lr--------g----h~ 138 (933)
T KOG1274|consen 90 -TIL--ARFTLPIRDLAVSGSGKMIAAGSD----------------DTAVKLLNLDDSSQEKVLR--------G----HD 138 (933)
T ss_pred -cee--eeeeccceEEEEecCCcEEEeecC----------------ceeEEEEeccccchheeec--------c----cC
Confidence 000 112235689999999999887654 2234444555422211111 1 12
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCce----------Ee-eEE-------eeCcee---cCCCceEEecC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPV----------LV-GQI-------FLGGKI---QSDSGVTVIDD 238 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~----------~v-~~i-------~~Gg~~---~~~~~v~~~~~ 238 (290)
..+.++.|+|.|.+|+++. .+|.|.+||+.+..-.. .+ .++ |-||.+ +-++.|.+++.
T Consensus 139 apVl~l~~~p~~~fLAvss-~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r 217 (933)
T KOG1274|consen 139 APVLQLSYDPKGNFLAVSS-CDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSR 217 (933)
T ss_pred CceeeeeEcCCCCEEEEEe-cCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEcc
Confidence 3567899999999999998 89999999997521000 00 111 112222 55666777764
Q ss_pred CCCCCCCCcceeecccccCCcceEEEccCCCEEEEE--cCCCCCCCcc
Q psy11412 239 PELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVS--SSLFSPWDKE 284 (290)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Va--n~~~~~~~~~ 284 (290)
++-.. . -.+++-.....-..++|||.|++|++. |..+..|+-+
T Consensus 218 ~~we~--~-f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 218 KGWEL--Q-FKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVD 262 (933)
T ss_pred CCcee--h-eeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecc
Confidence 43110 0 001111111125679999999999998 3467777766
No 70
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.45 E-value=1.3e-05 Score=77.72 Aligned_cols=31 Identities=16% Similarity=0.084 Sum_probs=23.1
Q ss_pred ceEEEEEcCCCCEEEEEeCCC--CeEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMH--GDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~--g~V~v~dv~d 64 (290)
.....++||||++|+...+.. ..|.+||+..
T Consensus 205 ~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~ 237 (433)
T PRK04922 205 PILSPAWSPDGKKLAYVSFERGRSAIYVQDLAT 237 (433)
T ss_pred ccccccCCCCCCEEEEEecCCCCcEEEEEECCC
Confidence 345788999999888765433 4689999854
No 71
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.44 E-value=1.7e-05 Score=76.99 Aligned_cols=28 Identities=18% Similarity=0.124 Sum_probs=20.6
Q ss_pred eEEEEccCCCEEEEEeCC--CCcEEEEEec
Q psy11412 183 TDILISLDDRYLYTSNWM--HGDIRQYDIR 210 (290)
Q Consensus 183 ~~i~~SpDGr~Lyvs~r~--~~~V~v~Dv~ 210 (290)
....+||||++|+..... ...|.+||+.
T Consensus 330 ~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~ 359 (428)
T PRK01029 330 SCPAWSPDGKKIAFCSVIKGVRQICVYDLA 359 (428)
T ss_pred cceeECCCCCEEEEEEcCCCCcEEEEEECC
Confidence 457899999988765433 3468899885
No 72
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.42 E-value=1.8e-05 Score=75.51 Aligned_cols=31 Identities=16% Similarity=0.073 Sum_probs=24.1
Q ss_pred ceEEEEEcCCCCEEEEEeCCC--CeEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMH--GDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~--g~V~v~dv~d 64 (290)
.....++||||++|+.+...+ ..|.+||+..
T Consensus 191 ~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~ 223 (417)
T TIGR02800 191 PILSPAWSPDGQKLAYVSFESGKPEIYVQDLAT 223 (417)
T ss_pred ceecccCCCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 456778999999998876543 4799999865
No 73
>KOG0271|consensus
Probab=98.40 E-value=4.3e-06 Score=78.10 Aligned_cols=143 Identities=18% Similarity=0.190 Sum_probs=83.1
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+-.+.|||||++|+ ++.++.++++||+... .|..+ .+.+ -..+-
T Consensus 117 ~Vl~~~fsp~g~~l~-tGsGD~TvR~WD~~Te-Tp~~t--~KgH-------------------------------~~WVl 161 (480)
T KOG0271|consen 117 AVLSVQFSPTGSRLV-TGSGDTTVRLWDLDTE-TPLFT--CKGH-------------------------------KNWVL 161 (480)
T ss_pred cEEEEEecCCCceEE-ecCCCceEEeeccCCC-Cccee--ecCC-------------------------------ccEEE
Confidence 466899999999996 5557899999999753 22211 1111 04577
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCC-CceeE-----EEE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPAR-SMVTD-----ILI 187 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~~~~~-----i~~ 187 (290)
.+++||||++++..+. .+ .+..++... .+.+.. .+++. .+..+ +++
T Consensus 162 cvawsPDgk~iASG~~-dg---------------~I~lwdpkt---g~~~g~---------~l~gH~K~It~Lawep~hl 213 (480)
T KOG0271|consen 162 CVAWSPDGKKIASGSK-DG---------------SIRLWDPKT---GQQIGR---------ALRGHKKWITALAWEPLHL 213 (480)
T ss_pred EEEECCCcchhhcccc-CC---------------eEEEecCCC---CCcccc---------cccCcccceeEEeeccccc
Confidence 7999999999986443 22 222222111 111110 01111 01111 567
Q ss_pred ccCCCEEEEEeCCCCcEEEEEecCC-------CCceEeeEEeeCce--e---cCCCceEEecCCC
Q psy11412 188 SLDDRYLYTSNWMHGDIRQYDIRDT-------AHPVLVGQIFLGGK--I---QSDSGVTVIDDPE 240 (290)
Q Consensus 188 SpDGr~Lyvs~r~~~~V~v~Dv~d~-------~~~~~v~~i~~Gg~--~---~~~~~v~~~~~~~ 240 (290)
.|..|+|..+. .+|+|.+||+.-. ++-..+.-+.-||. + +-|.+|.||+..+
T Consensus 214 ~p~~r~las~s-kDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~d 277 (480)
T KOG0271|consen 214 VPPCRRLASSS-KDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALD 277 (480)
T ss_pred CCCccceeccc-CCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccc
Confidence 88999877666 8999999999531 11112222333432 1 6788899998665
No 74
>PTZ00420 coronin; Provisional
Probab=98.38 E-value=2.8e-05 Score=77.95 Aligned_cols=123 Identities=11% Similarity=0.138 Sum_probs=71.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+..++|+|++..++++...+++|++||+.... .+..+.. ...+.
T Consensus 127 ~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~---~~~~i~~--------------------------------~~~V~ 171 (568)
T PTZ00420 127 KISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK---RAFQINM--------------------------------PKKLS 171 (568)
T ss_pred cEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc---EEEEEec--------------------------------CCcEE
Confidence 577899999999876665568999999997532 2222211 13577
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.++|+|+|+.|++++. ++.+.+||... ...+.++.. ..+ .. ......-..|++|+.+
T Consensus 172 SlswspdG~lLat~s~----------------D~~IrIwD~Rs---g~~i~tl~g--H~g-~~-~s~~v~~~~fs~d~~~ 228 (568)
T PTZ00420 172 SLKWNIKGNLLSGTCV----------------GKHMHIIDPRK---QEIASSFHI--HDG-GK-NTKNIWIDGLGGDDNY 228 (568)
T ss_pred EEEECCCCCEEEEEec----------------CCEEEEEECCC---CcEEEEEec--ccC-Cc-eeEEEEeeeEcCCCCE
Confidence 8999999999987653 12333343322 122221110 000 00 0001111346799999
Q ss_pred EEEEeCCC---CcEEEEEecCCCC
Q psy11412 194 LYTSNWMH---GDIRQYDIRDTAH 214 (290)
Q Consensus 194 Lyvs~r~~---~~V~v~Dv~d~~~ 214 (290)
|.++.... .+|.+||+.+...
T Consensus 229 IlTtG~d~~~~R~VkLWDlr~~~~ 252 (568)
T PTZ00420 229 ILSTGFSKNNMREMKLWDLKNTTS 252 (568)
T ss_pred EEEEEcCCCCccEEEEEECCCCCC
Confidence 98877443 3799999975443
No 75
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=98.38 E-value=1.4e-06 Score=56.19 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=29.6
Q ss_pred cCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCc
Q psy11412 189 LDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 225 (290)
Q Consensus 189 pDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg 225 (290)
|||++||++|+++++|+++|.. ..+.+.++++|.
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~---~~~~~~~i~vg~ 34 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTA---TNKVIATIPVGG 34 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECC---CCeEEEEEECCC
Confidence 7999999999999999999874 467888888866
No 76
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.38 E-value=3.9e-05 Score=73.98 Aligned_cols=31 Identities=10% Similarity=0.010 Sum_probs=22.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCC--CeEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMH--GDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~--g~V~v~dv~d 64 (290)
......+||||++|+.....+ ..|.+|++..
T Consensus 200 ~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~ 232 (430)
T PRK00178 200 PILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDT 232 (430)
T ss_pred ceeeeeECCCCCEEEEEEcCCCCCEEEEEECCC
Confidence 456789999999986554433 3688888864
No 77
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=98.36 E-value=2.2e-05 Score=71.57 Aligned_cols=127 Identities=24% Similarity=0.420 Sum_probs=83.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
....+.++ +.++|++++. ..++++|++++..|++++.+.+. +--+
T Consensus 88 l~~Dv~vs--e~yvyvad~s-sGL~IvDIS~P~sP~~~~~lnt~--------------------------------gyay 132 (370)
T COG5276 88 LFADVRVS--EEYVYVADWS-SGLRIVDISTPDSPTLIGFLNTD--------------------------------GYAY 132 (370)
T ss_pred hhheeEec--ccEEEEEcCC-CceEEEeccCCCCcceeccccCC--------------------------------ceEE
Confidence 44456665 6799999984 56999999999999888765442 1122
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
. ..-.|+++||+.- +.+ +..+++.+...++... +. +++.+ ...++++| |++
T Consensus 133 g--v~vsGn~aYVadl---------------ddg-fLivdvsdpssP~lag---ry-----a~~~~-d~~~v~IS--Gn~ 183 (370)
T COG5276 133 G--VYVSGNYAYVADL---------------DDG-FLIVDVSDPSSPQLAG---RY-----ALPGG-DTHDVAIS--GNY 183 (370)
T ss_pred E--EEecCCEEEEeec---------------cCc-EEEEECCCCCCceeee---ee-----ccCCC-CceeEEEe--cCe
Confidence 2 3456999999753 122 3446766643222111 11 12211 22456665 789
Q ss_pred EEEEeCCCCcEEEEEecCCCCceEeeEEeeCc
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 225 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg 225 (290)
.|++.|. +.+.+.||++|..|+++++..+|+
T Consensus 184 AYvA~~d-~GL~ivDVSnp~sPvli~~~n~g~ 214 (370)
T COG5276 184 AYVAWRD-GGLTIVDVSNPHSPVLIGSYNTGP 214 (370)
T ss_pred EEEEEeC-CCeEEEEccCCCCCeEEEEEecCC
Confidence 9999974 558899999999999999998874
No 78
>KOG0310|consensus
Probab=98.34 E-value=3.9e-05 Score=73.44 Aligned_cols=172 Identities=16% Similarity=0.129 Sum_probs=113.0
Q ss_pred EEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEec
Q psy11412 11 ADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVID 90 (290)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~ 90 (290)
-.++-|+..+.|+..+ ..-..++...+++|-...+++++..+|+|++||+...+ ..+-++..|
T Consensus 134 v~k~~d~s~a~v~~~l--~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~--~~v~elnhg------------- 196 (487)
T KOG0310|consen 134 VVKYWDLSTAYVQAEL--SGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT--SRVVELNHG------------- 196 (487)
T ss_pred eEEEEEcCCcEEEEEe--cCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC--ceeEEecCC-------------
Confidence 4455666666665433 12234889999999999888888889999999987532 233333222
Q ss_pred CCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccc
Q psy11412 91 DPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSS 170 (290)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~ 170 (290)
.....+.|-|.|..+..++ |..+.+||+.. ..+.+..
T Consensus 197 -------------------~pVe~vl~lpsgs~iasAg-----------------Gn~vkVWDl~~--G~qll~~----- 233 (487)
T KOG0310|consen 197 -------------------CPVESVLALPSGSLIASAG-----------------GNSVKVWDLTT--GGQLLTS----- 233 (487)
T ss_pred -------------------CceeeEEEcCCCCEEEEcC-----------------CCeEEEEEecC--Cceehhh-----
Confidence 3456788999998887653 33455566543 1111110
Q ss_pred cCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCccee
Q psy11412 171 LGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVII 250 (290)
Q Consensus 171 ~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~ 250 (290)
.. .....+..+++..|+++|+.+. .|+.|.|||+++ -+.+-.+..-+
T Consensus 234 ~~----~H~KtVTcL~l~s~~~rLlS~s-LD~~VKVfd~t~---~Kvv~s~~~~~------------------------- 280 (487)
T KOG0310|consen 234 MF----NHNKTVTCLRLASDSTRLLSGS-LDRHVKVFDTTN---YKVVHSWKYPG------------------------- 280 (487)
T ss_pred hh----cccceEEEEEeecCCceEeecc-cccceEEEEccc---eEEEEeeeccc-------------------------
Confidence 00 0123577899999999999888 899999999764 55555543323
Q ss_pred ecccccCCcceEEEccCCCEEEEE--cCCCCCCC
Q psy11412 251 KGRRFTGSSQMFQLSLDGKRIYVS--SSLFSPWD 282 (290)
Q Consensus 251 ~~~~~~~~P~~~a~sPDG~~L~Va--n~~~~~~~ 282 (290)
..=++++|||++.+++. |.+.+..+
T Consensus 281 -------pvLsiavs~dd~t~viGmsnGlv~~rr 307 (487)
T KOG0310|consen 281 -------PVLSIAVSPDDQTVVIGMSNGLVSIRR 307 (487)
T ss_pred -------ceeeEEecCCCceEEEecccceeeeeh
Confidence 34669999999999987 44555553
No 79
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.33 E-value=2.9e-05 Score=80.83 Aligned_cols=120 Identities=12% Similarity=0.101 Sum_probs=72.3
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCC-Cceee--eEEeecccccCCCceEEecCCCCcCCCCcceeecccc
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTA-HPVLV--GQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRF 108 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~-~~~~~--~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 108 (290)
...++.++|+|||++|++++. +++|.+|++.... ..... ...... .
T Consensus 483 ~~~V~~i~fs~dg~~latgg~-D~~I~iwd~~~~~~~~~~~~~~~~~~~------------------------------~ 531 (793)
T PLN00181 483 SNLVCAIGFDRDGEFFATAGV-NKKIKIFECESIIKDGRDIHYPVVELA------------------------------S 531 (793)
T ss_pred CCcEEEEEECCCCCEEEEEeC-CCEEEEEECCcccccccccccceEEec------------------------------c
Confidence 346789999999999988774 8999999975310 00000 000000 0
Q ss_pred CCCceEEEEccC-CCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEE
Q psy11412 109 TGSSQMFQLSLD-GKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILI 187 (290)
Q Consensus 109 g~gPr~vafsPd-G~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~ 187 (290)
......++|+|. +++|++++. + +.+.+|++.. .+.+.. ..+ .......++|
T Consensus 532 ~~~v~~l~~~~~~~~~las~~~---------------D-g~v~lWd~~~---~~~~~~-----~~~----H~~~V~~l~~ 583 (793)
T PLN00181 532 RSKLSGICWNSYIKSQVASSNF---------------E-GVVQVWDVAR---SQLVTE-----MKE----HEKRVWSIDY 583 (793)
T ss_pred cCceeeEEeccCCCCEEEEEeC---------------C-CeEEEEECCC---CeEEEE-----ecC----CCCCEEEEEE
Confidence 134567889875 667766543 2 2444444422 111211 011 1245778999
Q ss_pred cc-CCCEEEEEeCCCCcEEEEEecC
Q psy11412 188 SL-DDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 188 Sp-DGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
+| ||.+|+++. .++.|.+||+..
T Consensus 584 ~p~~~~~L~Sgs-~Dg~v~iWd~~~ 607 (793)
T PLN00181 584 SSADPTLLASGS-DDGSVKLWSINQ 607 (793)
T ss_pred cCCCCCEEEEEc-CCCEEEEEECCC
Confidence 97 788888777 789999999953
No 80
>KOG0279|consensus
Probab=98.32 E-value=1e-05 Score=72.82 Aligned_cols=153 Identities=12% Similarity=0.153 Sum_probs=95.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
-+.+++||+|.+.+.+.. -+.+|.+|++-. ..+.. +.-+ +. ..-+.
T Consensus 107 dVlsva~s~dn~qivSGS-rDkTiklwnt~g--~ck~t--~~~~---------------------------~~--~~WVs 152 (315)
T KOG0279|consen 107 DVLSVAFSTDNRQIVSGS-RDKTIKLWNTLG--VCKYT--IHED---------------------------SH--REWVS 152 (315)
T ss_pred ceEEEEecCCCceeecCC-Ccceeeeeeecc--cEEEE--EecC---------------------------CC--cCcEE
Confidence 577899999999996554 588999999742 12211 1111 00 14688
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
++.|||+..-.|+++. .| ++++.+|+.... +...+.+ + .......+.+||||..
T Consensus 153 cvrfsP~~~~p~Ivs~---s~-----------DktvKvWnl~~~---~l~~~~~-----g----h~~~v~t~~vSpDGsl 206 (315)
T KOG0279|consen 153 CVRFSPNESNPIIVSA---SW-----------DKTVKVWNLRNC---QLRTTFI-----G----HSGYVNTVTVSPDGSL 206 (315)
T ss_pred EEEEcCCCCCcEEEEc---cC-----------CceEEEEccCCc---chhhccc-----c----ccccEEEEEECCCCCE
Confidence 9999999755555543 12 235555655432 1111101 1 2246778999999987
Q ss_pred EEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEE
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYV 273 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~V 273 (290)
..... .++.+.+||+....+ +...+... -.++++|+|.--+|.+
T Consensus 207 casGg-kdg~~~LwdL~~~k~---lysl~a~~--------------------------------~v~sl~fspnrywL~~ 250 (315)
T KOG0279|consen 207 CASGG-KDGEAMLWDLNEGKN---LYSLEAFD--------------------------------IVNSLCFSPNRYWLCA 250 (315)
T ss_pred EecCC-CCceEEEEEccCCce---eEeccCCC--------------------------------eEeeEEecCCceeEee
Confidence 65544 689999999975433 23221111 4688999999999988
Q ss_pred EcC-CCCCCC
Q psy11412 274 SSS-LFSPWD 282 (290)
Q Consensus 274 an~-~~~~~~ 282 (290)
|-. .++-|+
T Consensus 251 at~~sIkIwd 260 (315)
T KOG0279|consen 251 ATATSIKIWD 260 (315)
T ss_pred ccCCceEEEe
Confidence 865 556665
No 81
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.31 E-value=3.3e-05 Score=74.82 Aligned_cols=51 Identities=16% Similarity=0.055 Sum_probs=30.4
Q ss_pred EEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeC--CCCeEEEEEcCC
Q psy11412 11 ADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNW--MHGDIRQYDIRD 64 (290)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~--~~g~V~v~dv~d 64 (290)
.-.++|+..++..... ..++......+||||++|+.+.. +...|.++++..
T Consensus 214 ~Iyv~dl~tg~~~~lt---~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~ 266 (419)
T PRK04043 214 TLYKYNLYTGKKEKIA---SSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNT 266 (419)
T ss_pred EEEEEECCCCcEEEEe---cCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence 3455666655433322 23444556779999998876643 235677777754
No 82
>KOG2055|consensus
Probab=98.30 E-value=9.8e-05 Score=70.54 Aligned_cols=63 Identities=22% Similarity=0.367 Sum_probs=46.4
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
+.++++.||.||+.||+++ +++.|++||+.. +..+-+.-..| .| +=
T Consensus 345 G~v~~~~fsSdsk~l~~~~-~~GeV~v~nl~~---~~~~~rf~D~G------~v------------------------~g 390 (514)
T KOG2055|consen 345 GVVSDFTFSSDSKELLASG-GTGEVYVWNLRQ---NSCLHRFVDDG------SV------------------------HG 390 (514)
T ss_pred cEEeeEEEecCCcEEEEEc-CCceEEEEecCC---cceEEEEeecC------cc------------------------ce
Confidence 3578899999999999999 889999999953 33333332222 11 34
Q ss_pred ceEEEccCCCEEEEEcC
Q psy11412 260 QMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~ 276 (290)
..++.|++|.+|++.+.
T Consensus 391 ts~~~S~ng~ylA~GS~ 407 (514)
T KOG2055|consen 391 TSLCISLNGSYLATGSD 407 (514)
T ss_pred eeeeecCCCceEEeccC
Confidence 56999999998888765
No 83
>KOG2110|consensus
Probab=98.29 E-value=2.7e-05 Score=72.43 Aligned_cols=136 Identities=15% Similarity=0.199 Sum_probs=85.9
Q ss_pred EEecCCCccCCCCCCCCCCC---ceEEEEEcCCCCEEEEE-eCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEe
Q psy11412 14 VIDIPAKQVQGYPGGDKVPA---MVTDILISLDDRYLYTS-NWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVI 89 (290)
Q Consensus 14 ~~~~~~~~~~~~~~~~~v~~---~p~~va~SpDGr~Lyva-~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~ 89 (290)
|-||.+.+..+.+ . ..+. ..+++++++.+-+|+.. +...|.|.+||+.+ .+.+..+..+ .
T Consensus 110 IydI~~MklLhTI-~-t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~n---l~~v~~I~aH-----~------ 173 (391)
T KOG2110|consen 110 IYDIKDMKLLHTI-E-TTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTIN---LQPVNTINAH-----K------ 173 (391)
T ss_pred EEecccceeehhh-h-ccCCCccceEeeccCCCCceEEecCCCCCceEEEEEccc---ceeeeEEEec-----C------
Confidence 4578888888876 2 2333 34455566666677655 44579999999876 3333333332 0
Q ss_pred cCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCcc
Q psy11412 90 DDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLS 169 (290)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~ 169 (290)
+....++||+||..|+.+++- | ++ +.+......+.+...-+
T Consensus 174 --------------------~~lAalafs~~G~llATASeK---------------G-TV--IRVf~v~~G~kl~eFRR- 214 (391)
T KOG2110|consen 174 --------------------GPLAALAFSPDGTLLATASEK---------------G-TV--IRVFSVPEGQKLYEFRR- 214 (391)
T ss_pred --------------------CceeEEEECCCCCEEEEeccC---------------c-eE--EEEEEcCCccEeeeeeC-
Confidence 345679999999999998873 2 22 22222111222221111
Q ss_pred ccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 170 SLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 170 ~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
| .. +...+.|+||||+.+|.++. ..++|.+|-+.+
T Consensus 215 ---G-~~--~~~IySL~Fs~ds~~L~~sS-~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 215 ---G-TY--PVSIYSLSFSPDSQFLAASS-NTETVHIFKLEK 249 (391)
T ss_pred ---C-ce--eeEEEEEEECCCCCeEEEec-CCCeEEEEEecc
Confidence 1 11 23578899999999999888 678999999964
No 84
>KOG0283|consensus
Probab=98.29 E-value=3.4e-05 Score=77.81 Aligned_cols=90 Identities=29% Similarity=0.309 Sum_probs=60.9
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeE--Ee------------eCcee-----------cCCCceE
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQ--IF------------LGGKI-----------QSDSGVT 234 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~--i~------------~Gg~~-----------~~~~~v~ 234 (290)
....+++|+|||+...++. .+|...+|++.+ .++... |. +|-++ +.|..++
T Consensus 452 ~lITAvcy~PdGk~avIGt-~~G~C~fY~t~~---lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIR 527 (712)
T KOG0283|consen 452 DLITAVCYSPDGKGAVIGT-FNGYCRFYDTEG---LKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIR 527 (712)
T ss_pred hhheeEEeccCCceEEEEE-eccEEEEEEccC---CeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceE
Confidence 3577899999999999988 788999998754 221111 10 11111 4566677
Q ss_pred EecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEEEcC
Q psy11412 235 VIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~ 276 (290)
++|..+.. ...-++|.+-++......|+.||+++..+++
T Consensus 528 I~d~~~~~---lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~se 566 (712)
T KOG0283|consen 528 IYDGRDKD---LVHKFKGFRNTSSQISASFSSDGKHIVSASE 566 (712)
T ss_pred EEeccchh---hhhhhcccccCCcceeeeEccCCCEEEEeec
Confidence 77763321 2224677776667788999999999999976
No 85
>KOG0771|consensus
Probab=98.27 E-value=6.3e-06 Score=77.50 Aligned_cols=30 Identities=23% Similarity=0.533 Sum_probs=26.5
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
..+.+++|+||+|+.++. .+|+|.++++.+
T Consensus 283 siSsl~VS~dGkf~AlGT-~dGsVai~~~~~ 312 (398)
T KOG0771|consen 283 SISSLAVSDDGKFLALGT-MDGSVAIYDAKS 312 (398)
T ss_pred cceeEEEcCCCcEEEEec-cCCcEEEEEece
Confidence 578899999999999988 699999998854
No 86
>KOG0645|consensus
Probab=98.26 E-value=6.8e-05 Score=67.44 Aligned_cols=119 Identities=15% Similarity=0.070 Sum_probs=72.7
Q ss_pred ceEEEEEcCC-CCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 34 MVTDILISLD-DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 34 ~p~~va~SpD-Gr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
....++++|- |+.|| ++.++.+|++|+...+..-.....+.-++ ....
T Consensus 16 r~W~~awhp~~g~ilA-scg~Dk~vriw~~~~~~s~~ck~vld~~h------------------------------krsV 64 (312)
T KOG0645|consen 16 RVWSVAWHPGKGVILA-SCGTDKAVRIWSTSSGDSWTCKTVLDDGH------------------------------KRSV 64 (312)
T ss_pred cEEEEEeccCCceEEE-eecCCceEEEEecCCCCcEEEEEeccccc------------------------------hhee
Confidence 4678999998 77666 45568999999986422222221111110 1468
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
|.+|++|.|++|.+++= .++... +.. .++.+..+. .++| ..+.+-.+++|++|+
T Consensus 65 RsvAwsp~g~~La~aSF-D~t~~I--w~k---~~~efecv~----------------~lEG----HEnEVK~Vaws~sG~ 118 (312)
T KOG0645|consen 65 RSVAWSPHGRYLASASF-DATVVI--WKK---EDGEFECVA----------------TLEG----HENEVKCVAWSASGN 118 (312)
T ss_pred eeeeecCCCcEEEEeec-cceEEE--eec---CCCceeEEe----------------eeec----cccceeEEEEcCCCC
Confidence 99999999998876542 121111 110 111111111 1122 124567799999999
Q ss_pred EEEEEeCCCCcEEEEEec
Q psy11412 193 YLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~ 210 (290)
+|+...| +.+|.+|.++
T Consensus 119 ~LATCSR-DKSVWiWe~d 135 (312)
T KOG0645|consen 119 YLATCSR-DKSVWIWEID 135 (312)
T ss_pred EEEEeeC-CCeEEEEEec
Confidence 9999886 6789999996
No 87
>KOG0772|consensus
Probab=98.26 E-value=5.1e-06 Score=80.11 Aligned_cols=124 Identities=17% Similarity=0.226 Sum_probs=72.7
Q ss_pred EEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCc-eeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceEE
Q psy11412 37 DILISLDDRYLYTSNWMHGDIRQYDIRDTAHP-VLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMF 115 (290)
Q Consensus 37 ~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~-~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~v 115 (290)
...+.|+.+-.+.++..+|++++|++.+.... +++.....++ . .-.|..-
T Consensus 273 ~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g---------------------------~--Rv~~tsC 323 (641)
T KOG0772|consen 273 CGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGG---------------------------K--RVPVTSC 323 (641)
T ss_pred ccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCC---------------------------c--ccCceee
Confidence 45689998888888888999999999764321 2222211111 0 1246678
Q ss_pred EEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCEEE
Q psy11412 116 QLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYLY 195 (290)
Q Consensus 116 afsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~Ly 195 (290)
+|+|||++++.... +| .+-.|+.- .+.++ |.-.+.. +--.+.....|.||+||++|.
T Consensus 324 ~~nrdg~~iAagc~---------------DG-SIQ~W~~~----~~~v~--p~~~vk~-AH~~g~~Itsi~FS~dg~~Ll 380 (641)
T KOG0772|consen 324 AWNRDGKLIAAGCL---------------DG-SIQIWDKG----SRTVR--PVMKVKD-AHLPGQDITSISFSYDGNYLL 380 (641)
T ss_pred ecCCCcchhhhccc---------------CC-ceeeeecC----Ccccc--cceEeee-ccCCCCceeEEEeccccchhh
Confidence 99999999776543 22 22112210 00111 0000000 000123567899999999987
Q ss_pred EEeCCCCcEEEEEecCCC
Q psy11412 196 TSNWMHGDIRQYDIRDTA 213 (290)
Q Consensus 196 vs~r~~~~V~v~Dv~d~~ 213 (290)
.=. .++++.+||+....
T Consensus 381 SRg-~D~tLKvWDLrq~k 397 (641)
T KOG0772|consen 381 SRG-FDDTLKVWDLRQFK 397 (641)
T ss_pred hcc-CCCceeeeeccccc
Confidence 655 68999999997543
No 88
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.25 E-value=8.6e-05 Score=77.36 Aligned_cols=156 Identities=17% Similarity=0.182 Sum_probs=92.6
Q ss_pred CceEEEEEcC-CCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 33 AMVTDILISL-DDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 33 ~~p~~va~Sp-DGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
+.+.+++|+| |+.+|++++ .+++|++||+... ..+..+... ..
T Consensus 576 ~~V~~l~~~p~~~~~L~Sgs-~Dg~v~iWd~~~~---~~~~~~~~~--------------------------------~~ 619 (793)
T PLN00181 576 KRVWSIDYSSADPTLLASGS-DDGSVKLWSINQG---VSIGTIKTK--------------------------------AN 619 (793)
T ss_pred CCEEEEEEcCCCCCEEEEEc-CCCEEEEEECCCC---cEEEEEecC--------------------------------CC
Confidence 3578999997 778887665 5899999999652 233322111 23
Q ss_pred ceEEEE-ccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 112 SQMFQL-SLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 112 Pr~vaf-sPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
...+.| +++|+++++.+. ++ .+..++.... ...+.. ..+ .......+.|+ |
T Consensus 620 v~~v~~~~~~g~~latgs~---------------dg-~I~iwD~~~~--~~~~~~-----~~~----h~~~V~~v~f~-~ 671 (793)
T PLN00181 620 ICCVQFPSESGRSLAFGSA---------------DH-KVYYYDLRNP--KLPLCT-----MIG----HSKTVSYVRFV-D 671 (793)
T ss_pred eEEEEEeCCCCCEEEEEeC---------------CC-eEEEEECCCC--CccceE-----ecC----CCCCEEEEEEe-C
Confidence 456778 457888887654 22 3444443221 000110 001 12346678887 7
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCC---ceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccC
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRDTAH---PVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLD 267 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d~~~---~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPD 267 (290)
+.+|+++. .+++|.+||+..... ...+..+. |. ......+.|+|+
T Consensus 672 ~~~lvs~s-~D~~ikiWd~~~~~~~~~~~~l~~~~-gh------------------------------~~~i~~v~~s~~ 719 (793)
T PLN00181 672 SSTLVSSS-TDNTLKLWDLSMSISGINETPLHSFM-GH------------------------------TNVKNFVGLSVS 719 (793)
T ss_pred CCEEEEEE-CCCEEEEEeCCCCccccCCcceEEEc-CC------------------------------CCCeeEEEEcCC
Confidence 88888887 789999999853211 11111110 11 013577999999
Q ss_pred CCEEEEEcC--CCCCCCcc
Q psy11412 268 GKRIYVSSS--LFSPWDKE 284 (290)
Q Consensus 268 G~~L~Van~--~~~~~~~~ 284 (290)
|++|++++. ....|++.
T Consensus 720 ~~~lasgs~D~~v~iw~~~ 738 (793)
T PLN00181 720 DGYIATGSETNEVFVYHKA 738 (793)
T ss_pred CCEEEEEeCCCEEEEEECC
Confidence 999999864 55566654
No 89
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.25 E-value=0.00011 Score=71.42 Aligned_cols=28 Identities=14% Similarity=-0.080 Sum_probs=19.0
Q ss_pred EEEEcCCCCE---EEEEeCC-CCeEEEEEcCC
Q psy11412 37 DILISLDDRY---LYTSNWM-HGDIRQYDIRD 64 (290)
Q Consensus 37 ~va~SpDGr~---Lyva~~~-~g~V~v~dv~d 64 (290)
.-++||||+. +|++... ...|.+.++..
T Consensus 189 sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~ 220 (428)
T PRK01029 189 TPTWMHIGSGFPYLYVSYKLGVPKIFLGSLEN 220 (428)
T ss_pred cceEccCCCceEEEEEEccCCCceEEEEECCC
Confidence 4489999984 5677542 34677888764
No 90
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.23 E-value=7.4e-05 Score=69.85 Aligned_cols=129 Identities=22% Similarity=0.314 Sum_probs=74.2
Q ss_pred CCCEEEEEeC----CCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceEEEEc
Q psy11412 43 DDRYLYTSNW----MHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLS 118 (290)
Q Consensus 43 DGr~Lyva~~----~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafs 118 (290)
|-+++||.+- ..++|.|+|.++ .+.++.+..| .--++++|
T Consensus 1 ~~~rvyV~D~~~~~~~~rv~viD~d~---~k~lGmi~~g---------------------------------~~~~~~~s 44 (342)
T PF06433_consen 1 DAHRVYVQDPVFFHMTSRVYVIDADS---GKLLGMIDTG---------------------------------FLGNVALS 44 (342)
T ss_dssp -TTEEEEEE-GGGGSSEEEEEEETTT---TEEEEEEEEE---------------------------------SSEEEEE-
T ss_pred CCcEEEEECCccccccceEEEEECCC---CcEEEEeecc---------------------------------cCCceeEC
Confidence 4567888765 246888998643 6778777665 22348899
Q ss_pred cCCCEEEEEcCCCCCcceeecccccCCCc---eeecceeeeeeecccccccCcc-ccCccccCCCCceeEEEEccCCCEE
Q psy11412 119 LDGKRIYVSSSLFSPWDKEIYPDLVKTDA---AFGSDEIMEFIQRNEMRSMPLS-SLGSWKYPARSMVTDILISLDDRYL 194 (290)
Q Consensus 119 PdG~~lYv~nel~~~~d~~~~~~~~~~g~---~~~~~~~~~~~~~~~i~~~p~~-~~~~~~~~~~~~~~~i~~SpDGr~L 194 (290)
|||+.+|+++.. +++. ..|. .+.++|..++....++. +|.+ .. + .......+++|.|||+|
T Consensus 45 pdgk~~y~a~T~---~sR~------~rG~RtDvv~~~D~~TL~~~~EI~-iP~k~R~----~-~~~~~~~~~ls~dgk~~ 109 (342)
T PF06433_consen 45 PDGKTIYVAETF---YSRG------TRGERTDVVEIWDTQTLSPTGEIE-IPPKPRA----Q-VVPYKNMFALSADGKFL 109 (342)
T ss_dssp TTSSEEEEEEEE---EEET------TEEEEEEEEEEEETTTTEEEEEEE-ETTS-B-------BS--GGGEEE-TTSSEE
T ss_pred CCCCEEEEEEEE---Eecc------ccccceeEEEEEecCcCcccceEe-cCCcchh----e-ecccccceEEccCCcEE
Confidence 999999998651 1110 1122 33333333322222221 2221 10 0 01234568999999999
Q ss_pred EEEeCC-CCcEEEEEecCCCCceEeeEEeeCc
Q psy11412 195 YTSNWM-HGDIRQYDIRDTAHPVLVGQIFLGG 225 (290)
Q Consensus 195 yvs~r~-~~~V~v~Dv~d~~~~~~v~~i~~Gg 225 (290)
|+.|.. ..+|+|.|+.. .+.+.+|++-|
T Consensus 110 ~V~N~TPa~SVtVVDl~~---~kvv~ei~~PG 138 (342)
T PF06433_consen 110 YVQNFTPATSVTVVDLAA---KKVVGEIDTPG 138 (342)
T ss_dssp EEEEESSSEEEEEEETTT---TEEEEEEEGTS
T ss_pred EEEccCCCCeEEEEECCC---CceeeeecCCC
Confidence 999976 47899999863 57778877654
No 91
>KOG0973|consensus
Probab=98.23 E-value=2.8e-05 Score=80.35 Aligned_cols=179 Identities=18% Similarity=0.201 Sum_probs=106.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
-+..++.|||+.+|+.... +++|.+|+...- +.+..+..+ .+.+-
T Consensus 131 DV~Dv~Wsp~~~~lvS~s~-DnsViiwn~~tF---~~~~vl~~H-------------------------------~s~VK 175 (942)
T KOG0973|consen 131 DVLDVNWSPDDSLLVSVSL-DNSVIIWNAKTF---ELLKVLRGH-------------------------------QSLVK 175 (942)
T ss_pred ccceeccCCCccEEEEecc-cceEEEEccccc---eeeeeeecc-------------------------------ccccc
Confidence 3557899999999976654 899999997653 333332221 14567
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
+++|+|-||+++.-+ ++..+.+|++.++...+.+.. | ++ ..+....-+-+..||||.+
T Consensus 176 Gvs~DP~Gky~ASqs----------------dDrtikvwrt~dw~i~k~It~-p---f~--~~~~~T~f~RlSWSPDG~~ 233 (942)
T KOG0973|consen 176 GVSWDPIGKYFASQS----------------DDRTLKVWRTSDWGIEKSITK-P---FE--ESPLTTFFLRLSWSPDGHH 233 (942)
T ss_pred ceEECCccCeeeeec----------------CCceEEEEEcccceeeEeecc-c---hh--hCCCcceeeecccCCCcCe
Confidence 799999999887643 344565566555322222221 1 11 0122245566889999999
Q ss_pred EEEEeCCCCcEEEEEecCCCCce----Eee--------E------------------------EeeCceecCCCceEEec
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAHPV----LVG--------Q------------------------IFLGGKIQSDSGVTVID 237 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~~~----~v~--------~------------------------i~~Gg~~~~~~~v~~~~ 237 (290)
|.+.+-.++......|.+.+..+ +++ + +.+| +.|++++||.
T Consensus 234 las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~Avg---SqDrSlSVW~ 310 (942)
T KOG0973|consen 234 LASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVG---SQDRSLSVWN 310 (942)
T ss_pred ecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEe---cCCccEEEEe
Confidence 99988766544444443322211 111 0 0112 4688899987
Q ss_pred CCCCCCCCCcceeecccccCCcceEEEccCCCEEEEEcC
Q psy11412 238 DPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~ 276 (290)
.. .|+|...----+....-+|.+||||..||+++.
T Consensus 311 T~----~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~ 345 (942)
T KOG0973|consen 311 TA----LPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSL 345 (942)
T ss_pred cC----CCCchhhhhhhhcCceeeeeEcCCCCeEEEEec
Confidence 53 333332111112234678999999999999965
No 92
>KOG0293|consensus
Probab=98.22 E-value=1.4e-05 Score=75.39 Aligned_cols=114 Identities=24% Similarity=0.324 Sum_probs=72.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+..+++|||.|+|.++. .+..+.+||+..+.....-. .+ -|-.+.
T Consensus 271 ~V~yi~wSPDdryLlaCg-~~e~~~lwDv~tgd~~~~y~---~~------------------------------~~~S~~ 316 (519)
T KOG0293|consen 271 PVSYIMWSPDDRYLLACG-FDEVLSLWDVDTGDLRHLYP---SG------------------------------LGFSVS 316 (519)
T ss_pred ceEEEEECCCCCeEEecC-chHheeeccCCcchhhhhcc---cC------------------------------cCCCcc
Confidence 566899999999997655 46789999997632111111 00 023566
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
..+.-|||.++.+.+. + .....++..- .+ ...|.........++++++||++
T Consensus 317 sc~W~pDg~~~V~Gs~---------------d-r~i~~wdlDg-----n~-------~~~W~gvr~~~v~dlait~Dgk~ 368 (519)
T KOG0293|consen 317 SCAWCPDGFRFVTGSP---------------D-RTIIMWDLDG-----NI-------LGNWEGVRDPKVHDLAITYDGKY 368 (519)
T ss_pred eeEEccCCceeEecCC---------------C-CcEEEecCCc-----ch-------hhcccccccceeEEEEEcCCCcE
Confidence 7889999998776443 1 1222233211 00 12332222245789999999999
Q ss_pred EEEEeCCCCcEEEEEec
Q psy11412 194 LYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~ 210 (290)
++... .+..|++|+..
T Consensus 369 vl~v~-~d~~i~l~~~e 384 (519)
T KOG0293|consen 369 VLLVT-VDKKIRLYNRE 384 (519)
T ss_pred EEEEe-cccceeeechh
Confidence 99888 67889998774
No 93
>KOG0646|consensus
Probab=98.21 E-value=4.4e-05 Score=72.83 Aligned_cols=173 Identities=18% Similarity=0.258 Sum_probs=107.5
Q ss_pred CCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCC
Q psy11412 19 AKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQP 98 (290)
Q Consensus 19 ~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~ 98 (290)
+.+++.++ -+|+-++.++.+|+|.+|+.+. -.|.|.+|-+..+. ++..+ .++
T Consensus 71 ~~~~~q~~---v~Pg~v~al~s~n~G~~l~ag~-i~g~lYlWelssG~---LL~v~-~aH-------------------- 122 (476)
T KOG0646|consen 71 KDQVVQYI---VLPGPVHALASSNLGYFLLAGT-ISGNLYLWELSSGI---LLNVL-SAH-------------------- 122 (476)
T ss_pred hhhhhhhc---ccccceeeeecCCCceEEEeec-ccCcEEEEEecccc---HHHHH-Hhh--------------------
Confidence 34444444 5788899999999999997654 47899999997632 22211 110
Q ss_pred CcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccc-cccCccccCccccC
Q psy11412 99 DPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEM-RSMPLSSLGSWKYP 177 (290)
Q Consensus 99 ~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i-~~~p~~~~~~~~~~ 177 (290)
-....-+.|+-||.+++.++. || .+..|++.+....-.. ...|. ..| .
T Consensus 123 ----------YQ~ITcL~fs~dgs~iiTgsk---------------Dg-~V~vW~l~~lv~a~~~~~~~p~---~~f--~ 171 (476)
T KOG0646|consen 123 ----------YQSITCLKFSDDGSHIITGSK---------------DG-AVLVWLLTDLVSADNDHSVKPL---HIF--S 171 (476)
T ss_pred ----------ccceeEEEEeCCCcEEEecCC---------------Cc-cEEEEEEEeecccccCCCccce---eee--c
Confidence 024556999999999997654 33 3444555442211111 11111 111 1
Q ss_pred CC-CceeEEEEccC--CCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeeccc
Q psy11412 178 AR-SMVTDILISLD--DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRR 254 (290)
Q Consensus 178 ~~-~~~~~i~~SpD--Gr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 254 (290)
.. -...++.+++- -.+||++. .|.++.+||++- ..++.++...
T Consensus 172 ~HtlsITDl~ig~Gg~~~rl~TaS-~D~t~k~wdlS~---g~LLlti~fp------------------------------ 217 (476)
T KOG0646|consen 172 DHTLSITDLQIGSGGTNARLYTAS-EDRTIKLWDLSL---GVLLLTITFP------------------------------ 217 (476)
T ss_pred cCcceeEEEEecCCCccceEEEec-CCceEEEEEecc---ceeeEEEecC------------------------------
Confidence 11 13455666554 34678887 689999999963 3455444321
Q ss_pred ccCCcceEEEccCCCEEEEEcCCCCCCCcccC
Q psy11412 255 FTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIY 286 (290)
Q Consensus 255 ~~~~P~~~a~sPDG~~L~Van~~~~~~~~~~~ 286 (290)
..+..++++|-+++.|+.++-.+-|.-.||
T Consensus 218 --~si~av~lDpae~~~yiGt~~G~I~~~~~~ 247 (476)
T KOG0646|consen 218 --SSIKAVALDPAERVVYIGTEEGKIFQNLLF 247 (476)
T ss_pred --CcceeEEEcccccEEEecCCcceEEeeehh
Confidence 157889999999999999997666665554
No 94
>KOG2096|consensus
Probab=98.21 E-value=1.9e-05 Score=72.51 Aligned_cols=157 Identities=18% Similarity=0.141 Sum_probs=88.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC--CCCceee-eEEeecccccCCCceEEecCCCCcCCCCcceeeccccCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRD--TAHPVLV-GQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 110 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d--~~~~~~~-~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 110 (290)
.-++.++|||||+|+++.. .-.|.||.+-= .+.-+.+ ..+.+ .++ .+
T Consensus 230 ~n~~aavSP~GRFia~~gF-TpDVkVwE~~f~kdG~fqev~rvf~L---------------------------kGH--~s 279 (420)
T KOG2096|consen 230 SNYDAAVSPDGRFIAVSGF-TPDVKVWEPIFTKDGTFQEVKRVFSL---------------------------KGH--QS 279 (420)
T ss_pred cccceeeCCCCcEEEEecC-CCCceEEEEEeccCcchhhhhhhhee---------------------------ccc--hh
Confidence 4457899999999999987 45789998631 1111111 11111 111 15
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeee-ee---ecccccccCccccCccccCCCCceeEEE
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIME-FI---QRNEMRSMPLSSLGSWKYPARSMVTDIL 186 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~-~~---~~~~i~~~p~~~~~~~~~~~~~~~~~i~ 186 (290)
++..++|||+.+++..++.. +.|-+ |++.- .. .+..++..+. ... ..+..|-.+.
T Consensus 280 aV~~~aFsn~S~r~vtvSkD-G~wri---------------wdtdVrY~~~qDpk~Lk~g~~-pl~----aag~~p~RL~ 338 (420)
T KOG2096|consen 280 AVLAAAFSNSSTRAVTVSKD-GKWRI---------------WDTDVRYEAGQDPKILKEGSA-PLH----AAGSEPVRLE 338 (420)
T ss_pred heeeeeeCCCcceeEEEecC-CcEEE---------------eeccceEecCCCchHhhcCCc-chh----hcCCCceEEE
Confidence 77889999999999887652 22221 22110 00 0112221110 000 0123456799
Q ss_pred EccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEcc
Q psy11412 187 ISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSL 266 (290)
Q Consensus 187 ~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sP 266 (290)
+||.|+.|.+|- ..++.+|...+.........+ .+ ..-..+.|+|
T Consensus 339 lsP~g~~lA~s~--gs~l~~~~se~g~~~~~~e~~-h~--------------------------------~~Is~is~~~ 383 (420)
T KOG2096|consen 339 LSPSGDSLAVSF--GSDLKVFASEDGKDYPELEDI-HS--------------------------------TTISSISYSS 383 (420)
T ss_pred eCCCCcEEEeec--CCceEEEEcccCccchhHHHh-hc--------------------------------CceeeEEecC
Confidence 999999999886 346888865431111011111 01 1356799999
Q ss_pred CCCEEEEEcC
Q psy11412 267 DGKRIYVSSS 276 (290)
Q Consensus 267 DG~~L~Van~ 276 (290)
||++++.+..
T Consensus 384 ~g~~~atcGd 393 (420)
T KOG2096|consen 384 DGKYIATCGD 393 (420)
T ss_pred CCcEEeeecc
Confidence 9999999876
No 95
>KOG2919|consensus
Probab=98.20 E-value=1.3e-05 Score=73.61 Aligned_cols=121 Identities=19% Similarity=0.172 Sum_probs=74.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceee-eEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC-
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLV-GQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS- 111 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~-~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g- 111 (290)
..++++|||||.+||. ++ ...|++||+..+++--.. .++.-| . ....+
T Consensus 160 aAhsL~Fs~DGeqlfa-Gy-krcirvFdt~RpGr~c~vy~t~~~~-k---------------------------~gq~gi 209 (406)
T KOG2919|consen 160 AAHSLQFSPDGEQLFA-GY-KRCIRVFDTSRPGRDCPVYTTVTKG-K---------------------------FGQKGI 209 (406)
T ss_pred hheeEEecCCCCeEee-cc-cceEEEeeccCCCCCCcchhhhhcc-c---------------------------ccccce
Confidence 4578999999999984 44 679999999654432211 111110 0 00012
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDD 191 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDG 191 (290)
...++|||-...++....-...++.+.. ++ ++++.. ..+ ..+++.++.+.+||
T Consensus 210 isc~a~sP~~~~~~a~gsY~q~~giy~~-----~~-------------~~pl~l-----lgg----h~gGvThL~~~edG 262 (406)
T KOG2919|consen 210 ISCFAFSPMDSKTLAVGSYGQRVGIYND-----DG-------------RRPLQL-----LGG----HGGGVTHLQWCEDG 262 (406)
T ss_pred eeeeeccCCCCcceeeecccceeeeEec-----CC-------------CCceee-----ecc----cCCCeeeEEeccCc
Confidence 3458999988766655543222222110 11 111111 001 23578899999999
Q ss_pred CEEEEEeCCCCcEEEEEecC
Q psy11412 192 RYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d 211 (290)
..||+..|-+..|..|||..
T Consensus 263 n~lfsGaRk~dkIl~WDiR~ 282 (406)
T KOG2919|consen 263 NKLFSGARKDDKILCWDIRY 282 (406)
T ss_pred CeecccccCCCeEEEEeehh
Confidence 99999999999999999954
No 96
>KOG0772|consensus
Probab=98.20 E-value=3.9e-05 Score=74.12 Aligned_cols=202 Identities=16% Similarity=0.191 Sum_probs=118.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCC-CCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDT-AHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~-~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
.+..+++.|.|-++|+..+ +-+|.+||+.-- ...+.-.+ ..|.. +...
T Consensus 169 ~Vsal~~Dp~GaR~~sGs~-Dy~v~~wDf~gMdas~~~fr~----------------------l~P~E--------~h~i 217 (641)
T KOG0772|consen 169 IVSALAVDPSGARFVSGSL-DYTVKFWDFQGMDASMRSFRQ----------------------LQPCE--------THQI 217 (641)
T ss_pred EEEEeeecCCCceeeeccc-cceEEEEecccccccchhhhc----------------------cCccc--------cccc
Confidence 5678999999999987776 789999999531 11111110 01111 2456
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
+.+.||+.|..+.|+..- +..-+ ++ .+|-.+ ..-.. ..+-|..+.... | .-.......++|+-+
T Consensus 218 ~sl~ys~Tg~~iLvvsg~-aqakl--~D---RdG~~~--~e~~K--GDQYI~Dm~nTK--G----Hia~lt~g~whP~~k 281 (641)
T KOG0772|consen 218 NSLQYSVTGDQILVVSGS-AQAKL--LD---RDGFEI--VEFSK--GDQYIRDMYNTK--G----HIAELTCGCWHPDNK 281 (641)
T ss_pred ceeeecCCCCeEEEEecC-cceeE--Ec---cCCcee--eeeec--cchhhhhhhccC--C----ceeeeeccccccCcc
Confidence 889999999888887541 11000 10 122111 01000 011111111000 0 002234457899988
Q ss_pred EEEEEeCCCCcEEEEEecCCC-CceEeeEEeeCce-e-----------------cCCCceEEecCCCCCCCCCcceeecc
Q psy11412 193 YLYTSNWMHGDIRQYDIRDTA-HPVLVGQIFLGGK-I-----------------QSDSGVTVIDDPELDKQPDPVIIKGR 253 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d~~-~~~~v~~i~~Gg~-~-----------------~~~~~v~~~~~~~~~~~~~~~~~~~~ 253 (290)
--+.++-.++++++||+.+.. +..++...+.|+. + .-||.+..|+...+.+.|.-......
T Consensus 282 ~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH 361 (641)
T KOG0772|consen 282 EEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAH 361 (641)
T ss_pred cceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeecc
Confidence 877777789999999997643 3334444444432 2 56777899987666666664433333
Q ss_pred cccCCcceEEEccCCCEEEEEcC--CCCCCC
Q psy11412 254 RFTGSSQMFQLSLDGKRIYVSSS--LFSPWD 282 (290)
Q Consensus 254 ~~~~~P~~~a~sPDG~~L~Van~--~~~~~~ 282 (290)
.-|..-..++||+||++|+.-.. +++.||
T Consensus 362 ~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWD 392 (641)
T KOG0772|consen 362 LPGQDITSISFSYDGNYLLSRGFDDTLKVWD 392 (641)
T ss_pred CCCCceeEEEeccccchhhhccCCCceeeee
Confidence 33345789999999999998644 888887
No 97
>KOG0973|consensus
Probab=98.17 E-value=2.3e-05 Score=80.90 Aligned_cols=197 Identities=16% Similarity=0.168 Sum_probs=106.5
Q ss_pred CceeEEEEEecCCCccCCCCC----CCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccC
Q psy11412 7 GTYKADKVIDIPAKQVQGYPG----GDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQS 82 (290)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~----~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~ 82 (290)
+-|..+.|.+-...+...-.. -..=.+.+..+-|||||++||++. ++..|.+|.....+....-+ ..|+. .+
T Consensus 40 ~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGS-DD~~v~iW~~~~~~~~~~fg--s~g~~-~~ 115 (942)
T KOG0973|consen 40 VIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGS-DDRLVMIWERAEIGSGTVFG--STGGA-KN 115 (942)
T ss_pred eeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeecc-CcceEEEeeecccCCccccc--ccccc-cc
Confidence 468888877544333222100 001234677888999999999775 47889999875311000000 00100 00
Q ss_pred CCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeeccc
Q psy11412 83 DSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNE 162 (290)
Q Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~ 162 (290)
..+.-++ ..+.++. +....+..+||+++|...+- ++.+.+++...|...+.
T Consensus 116 vE~wk~~-----------~~l~~H~--~DV~Dv~Wsp~~~~lvS~s~----------------DnsViiwn~~tF~~~~v 166 (942)
T KOG0973|consen 116 VESWKVV-----------SILRGHD--SDVLDVNWSPDDSLLVSVSL----------------DNSVIIWNAKTFELLKV 166 (942)
T ss_pred cceeeEE-----------EEEecCC--CccceeccCCCccEEEEecc----------------cceEEEEccccceeeee
Confidence 0000000 0001111 34566999999998886543 22344455555421111
Q ss_pred ccccCccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCC
Q psy11412 163 MRSMPLSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELD 242 (290)
Q Consensus 163 i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~ 242 (290)
+. + ....+-++.|.|=|+|+.+-. .|.+|.||++.+-+-.+.|.. +...
T Consensus 167 l~--------~----H~s~VKGvs~DP~Gky~ASqs-dDrtikvwrt~dw~i~k~It~-pf~~----------------- 215 (942)
T KOG0973|consen 167 LR--------G----HQSLVKGVSWDPIGKYFASQS-DDRTLKVWRTSDWGIEKSITK-PFEE----------------- 215 (942)
T ss_pred ee--------c----ccccccceEECCccCeeeeec-CCceEEEEEcccceeeEeecc-chhh-----------------
Confidence 11 1 113455699999999987766 789999999866222222221 0110
Q ss_pred CCCCcceeecccccCCcceEEEccCCCEEEEEcCC
Q psy11412 243 KQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSL 277 (290)
Q Consensus 243 ~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~~ 277 (290)
.|. .-+-+.+.+||||++|.++|+.
T Consensus 216 -~~~---------~T~f~RlSWSPDG~~las~nA~ 240 (942)
T KOG0973|consen 216 -SPL---------TTFFLRLSWSPDGHHLASPNAV 240 (942)
T ss_pred -CCC---------cceeeecccCCCcCeecchhhc
Confidence 000 0145779999999999999884
No 98
>PTZ00421 coronin; Provisional
Probab=98.14 E-value=6.8e-05 Score=74.15 Aligned_cols=117 Identities=15% Similarity=0.130 Sum_probs=66.9
Q ss_pred CCceEEEEcc-CCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEc
Q psy11412 110 GSSQMFQLSL-DGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILIS 188 (290)
Q Consensus 110 ~gPr~vafsP-dG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~S 188 (290)
+....++|+| |+++|+.+++ ++ .+.+|++.+........ .+.....+ ....+..|+|+
T Consensus 76 ~~V~~v~fsP~d~~~LaSgS~---------------Dg-tIkIWdi~~~~~~~~~~-~~l~~L~g----H~~~V~~l~f~ 134 (493)
T PTZ00421 76 GPIIDVAFNPFDPQKLFTASE---------------DG-TIMGWGIPEEGLTQNIS-DPIVHLQG----HTKKVGIVSFH 134 (493)
T ss_pred CCEEEEEEcCCCCCEEEEEeC---------------CC-EEEEEecCCCccccccC-cceEEecC----CCCcEEEEEeC
Confidence 4678899999 8888887765 22 33334432200000000 00000111 12356789999
Q ss_pred cCC-CEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccC
Q psy11412 189 LDD-RYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLD 267 (290)
Q Consensus 189 pDG-r~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPD 267 (290)
|++ ..|+++. .+++|.+||+.. ...+..+.. . .+....++|+||
T Consensus 135 P~~~~iLaSgs-~DgtVrIWDl~t---g~~~~~l~~-h------------------------------~~~V~sla~spd 179 (493)
T PTZ00421 135 PSAMNVLASAG-ADMVVNVWDVER---GKAVEVIKC-H------------------------------SDQITSLEWNLD 179 (493)
T ss_pred cCCCCEEEEEe-CCCEEEEEECCC---CeEEEEEcC-C------------------------------CCceEEEEEECC
Confidence 987 5666666 689999999964 222222211 1 014677888999
Q ss_pred CCEEEEEcC--CCCCCC
Q psy11412 268 GKRIYVSSS--LFSPWD 282 (290)
Q Consensus 268 G~~L~Van~--~~~~~~ 282 (290)
|+.|++++. .+.-||
T Consensus 180 G~lLatgs~Dg~IrIwD 196 (493)
T PTZ00421 180 GSLLCTTSKDKKLNIID 196 (493)
T ss_pred CCEEEEecCCCEEEEEE
Confidence 988888764 455555
No 99
>KOG0293|consensus
Probab=98.14 E-value=6.2e-05 Score=71.10 Aligned_cols=150 Identities=15% Similarity=0.119 Sum_probs=93.1
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
.-+..+.||++|+||+++.- +-+.-+|.+....+.++..+. .|+. ..+
T Consensus 225 dEVWfl~FS~nGkyLAsaSk-D~Taiiw~v~~d~~~kl~~tl-vgh~------------------------------~~V 272 (519)
T KOG0293|consen 225 DEVWFLQFSHNGKYLASASK-DSTAIIWIVVYDVHFKLKKTL-VGHS------------------------------QPV 272 (519)
T ss_pred CcEEEEEEcCCCeeEeeccC-CceEEEEEEecCcceeeeeee-eccc------------------------------Cce
Confidence 35788999999999998875 668889999765554444332 2210 345
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
--+.+|||.++|....- ...+..+|+.+.. .....+.+ .+..+...+.-|||.
T Consensus 273 ~yi~wSPDdryLlaCg~----------------~e~~~lwDv~tgd---~~~~y~~~--------~~~S~~sc~W~pDg~ 325 (519)
T KOG0293|consen 273 SYIMWSPDDRYLLACGF----------------DEVLSLWDVDTGD---LRHLYPSG--------LGFSVSSCAWCPDGF 325 (519)
T ss_pred EEEEECCCCCeEEecCc----------------hHheeeccCCcch---hhhhcccC--------cCCCcceeEEccCCc
Confidence 66999999998886532 1123334433210 01111110 123466789999999
Q ss_pred EEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEE
Q psy11412 193 YLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIY 272 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~ 272 (290)
.+.+.. -+.+|.-||++- ..++.+ .|.+. -....+++++||++++
T Consensus 326 ~~V~Gs-~dr~i~~wdlDg----n~~~~W-----------------------------~gvr~-~~v~dlait~Dgk~vl 370 (519)
T KOG0293|consen 326 RFVTGS-PDRTIIMWDLDG----NILGNW-----------------------------EGVRD-PKVHDLAITYDGKYVL 370 (519)
T ss_pred eeEecC-CCCcEEEecCCc----chhhcc-----------------------------ccccc-ceeEEEEEcCCCcEEE
Confidence 977666 678999999841 222221 11111 0367899999999999
Q ss_pred EEcC
Q psy11412 273 VSSS 276 (290)
Q Consensus 273 Van~ 276 (290)
....
T Consensus 371 ~v~~ 374 (519)
T KOG0293|consen 371 LVTV 374 (519)
T ss_pred EEec
Confidence 8753
No 100
>KOG0288|consensus
Probab=98.12 E-value=2.9e-05 Score=73.17 Aligned_cols=31 Identities=13% Similarity=0.287 Sum_probs=26.5
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDT 65 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~ 65 (290)
....+.|+++++++.++.. ++.+++|++.+.
T Consensus 221 ~it~~d~d~~~~~~iAas~-d~~~r~Wnvd~~ 251 (459)
T KOG0288|consen 221 NITSIDFDSDNKHVIAASN-DKNLRLWNVDSL 251 (459)
T ss_pred CcceeeecCCCceEEeecC-CCceeeeeccch
Confidence 4778999999999988765 789999999763
No 101
>KOG2139|consensus
Probab=98.10 E-value=0.0001 Score=68.67 Aligned_cols=165 Identities=18% Similarity=0.160 Sum_probs=93.6
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+.++...+||..|..+.+++..|.+||.+.+. ...+. ..| .+|..
T Consensus 197 pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~-~~pL~--~~g-------------------------------lgg~s 242 (445)
T KOG2139|consen 197 PVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQ-KIPLI--PKG-------------------------------LGGFS 242 (445)
T ss_pred eeeEEEEcCCCCEEeecccCcceEEEEcCCCCC-ccccc--ccC-------------------------------CCcee
Confidence 466899999999999999999999999987532 11111 111 25677
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.+.+||||.+|+.+.- | + .+.+++-.. . -.-+.|.+.. ..+.....||+|+|
T Consensus 243 lLkwSPdgd~lfaAt~-----d----------a-vfrlw~e~q------~-----wt~erw~lgs-grvqtacWspcGsf 294 (445)
T KOG2139|consen 243 LLKWSPDGDVLFAATC-----D----------A-VFRLWQENQ------S-----WTKERWILGS-GRVQTACWSPCGSF 294 (445)
T ss_pred eEEEcCCCCEEEEecc-----c----------c-eeeeehhcc------c-----ceecceeccC-CceeeeeecCCCCE
Confidence 8999999999998753 1 1 222221100 0 0012232222 24455679999999
Q ss_pred EEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEE-ecCCCCCCCCCcceeec-ccccCCcceEEEccCCCEE
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTV-IDDPELDKQPDPVIIKG-RRFTGSSQMFQLSLDGKRI 271 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~-~~~~~~~~~~~~~~~~~-~~~~~~P~~~a~sPDG~~L 271 (290)
|..+.-++- .+|.+.-+++...... .++ -..+.+ .|... .....| ...++.++.++++|.|.+|
T Consensus 295 LLf~~sgsp--~lysl~f~~~~~~~~~--~~~----~k~~lliaDL~e------~ti~ag~~l~cgeaq~lawDpsGeyL 360 (445)
T KOG2139|consen 295 LLFACSGSP--RLYSLTFDGEDSVFLR--PQS----IKRVLLIADLQE------VTICAGQRLCCGEAQCLAWDPSGEYL 360 (445)
T ss_pred EEEEEcCCc--eEEEEeecCCCccccC--ccc----ceeeeeeccchh------hhhhcCcccccCccceeeECCCCCEE
Confidence 887774443 4555532222111110 000 011111 12111 011112 3446779999999999999
Q ss_pred EEE
Q psy11412 272 YVS 274 (290)
Q Consensus 272 ~Va 274 (290)
+|.
T Consensus 361 av~ 363 (445)
T KOG2139|consen 361 AVI 363 (445)
T ss_pred EEE
Confidence 997
No 102
>KOG0288|consensus
Probab=98.10 E-value=6.5e-05 Score=70.84 Aligned_cols=148 Identities=18% Similarity=0.258 Sum_probs=85.4
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
....|..+ + ..+.++-.+.+|+.||+.. ...+.++.+| +...
T Consensus 304 ~cnDI~~~--~-~~~~SgH~DkkvRfwD~Rs---~~~~~sv~~g--------------------------------g~vt 345 (459)
T KOG0288|consen 304 QCNDIVCS--I-SDVISGHFDKKVRFWDIRS---ADKTRSVPLG--------------------------------GRVT 345 (459)
T ss_pred cccceEec--c-eeeeecccccceEEEeccC---CceeeEeecC--------------------------------ccee
Confidence 34456655 2 3345666688999999864 3334444444 3566
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.+.++++|..|-.... ++ .+..+++.. .....+... .+. -.......+.|||||++
T Consensus 346 Sl~ls~~g~~lLsssR---------------Dd-tl~viDlRt---~eI~~~~sA---~g~--k~asDwtrvvfSpd~~Y 401 (459)
T KOG0288|consen 346 SLDLSMDGLELLSSSR---------------DD-TLKVIDLRT---KEIRQTFSA---EGF--KCASDWTRVVFSPDGSY 401 (459)
T ss_pred eEeeccCCeEEeeecC---------------CC-ceeeeeccc---ccEEEEeec---ccc--ccccccceeEECCCCce
Confidence 7899999998887643 11 222233221 222211110 010 00123456899999999
Q ss_pred EEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEE
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYV 273 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~V 273 (290)
+.+.. .+++|.||++.. + ++.......+. . .....++|+|.|+.|+.
T Consensus 402 vaAGS-~dgsv~iW~v~t-g--KlE~~l~~s~s-------------------~----------~aI~s~~W~~sG~~Lls 448 (459)
T KOG0288|consen 402 VAAGS-ADGSVYIWSVFT-G--KLEKVLSLSTS-------------------N----------AAITSLSWNPSGSGLLS 448 (459)
T ss_pred eeecc-CCCcEEEEEccC-c--eEEEEeccCCC-------------------C----------cceEEEEEcCCCchhhc
Confidence 88877 799999999953 2 22211111110 0 03577999999999998
Q ss_pred EcC
Q psy11412 274 SSS 276 (290)
Q Consensus 274 an~ 276 (290)
|..
T Consensus 449 adk 451 (459)
T KOG0288|consen 449 ADK 451 (459)
T ss_pred ccC
Confidence 865
No 103
>KOG0285|consensus
Probab=98.10 E-value=0.00014 Score=67.65 Aligned_cols=181 Identities=16% Similarity=0.150 Sum_probs=111.7
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
+.+.++++.|-+.+++++ ..++++.+||+.. .++..++ +|+ + ...
T Consensus 152 gWVr~vavdP~n~wf~tg-s~DrtikIwDlat---g~Lkltl-tGh-------i-----------------------~~v 196 (460)
T KOG0285|consen 152 GWVRSVAVDPGNEWFATG-SADRTIKIWDLAT---GQLKLTL-TGH-------I-----------------------ETV 196 (460)
T ss_pred ceEEEEeeCCCceeEEec-CCCceeEEEEccc---CeEEEee-cch-------h-----------------------hee
Confidence 367899999998888655 4689999999975 2222211 121 0 468
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
|+++||+-..+||.+.| ++.+.-||+.. .+.++. ..| .-..++.+.+.|-=+
T Consensus 197 r~vavS~rHpYlFs~ge----------------dk~VKCwDLe~---nkvIR~-----YhG----HlS~V~~L~lhPTld 248 (460)
T KOG0285|consen 197 RGVAVSKRHPYLFSAGE----------------DKQVKCWDLEY---NKVIRH-----YHG----HLSGVYCLDLHPTLD 248 (460)
T ss_pred eeeeecccCceEEEecC----------------CCeeEEEechh---hhhHHH-----hcc----ccceeEEEeccccce
Confidence 99999999999999876 23343344432 333431 111 114678899999999
Q ss_pred EEEEEeCCCCcEEEEEecCCCCc-------eEeeEE---eeCcee---cCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 193 YLYTSNWMHGDIRQYDIRDTAHP-------VLVGQI---FLGGKI---QSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d~~~~-------~~v~~i---~~Gg~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
.|+.+.| +.+++|||+...... ..+.++ ++..++ +-|.+|.+||.....+ ...++.--...
T Consensus 249 vl~t~gr-Dst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt-----~~tlt~hkksv 322 (460)
T KOG0285|consen 249 VLVTGGR-DSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKT-----MITLTHHKKSV 322 (460)
T ss_pred eEEecCC-cceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCce-----eEeeeccccee
Confidence 9988884 789999999542211 112222 233333 6788999999543211 01111111247
Q ss_pred ceEEEccCCCEEEEEcC-CCCCCC
Q psy11412 260 QMFQLSLDGKRIYVSSS-LFSPWD 282 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~-~~~~~~ 282 (290)
|.+++.|+-...+.|+. -+..|+
T Consensus 323 ral~lhP~e~~fASas~dnik~w~ 346 (460)
T KOG0285|consen 323 RALCLHPKENLFASASPDNIKQWK 346 (460)
T ss_pred eEEecCCchhhhhccCCccceecc
Confidence 88888887766655544 555554
No 104
>KOG0289|consensus
Probab=98.09 E-value=0.00016 Score=68.65 Aligned_cols=150 Identities=16% Similarity=0.175 Sum_probs=93.4
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
.+-+.++.+.|.|.||..++. +++....|+++........ .. ..+-.
T Consensus 303 ~~~V~~ls~h~tgeYllsAs~-d~~w~Fsd~~~g~~lt~vs---~~-----------------------------~s~v~ 349 (506)
T KOG0289|consen 303 EEPVTGLSLHPTGEYLLSASN-DGTWAFSDISSGSQLTVVS---DE-----------------------------TSDVE 349 (506)
T ss_pred cccceeeeeccCCcEEEEecC-CceEEEEEccCCcEEEEEe---ec-----------------------------cccce
Confidence 345678999999999988864 7888888887643222211 00 00124
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDD 191 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDG 191 (290)
-...+|||||-.+....+ ++ .+.+|++.. +..++.+| + ..+....|.||-+|
T Consensus 350 ~ts~~fHpDgLifgtgt~---------------d~-~vkiwdlks---~~~~a~Fp-----g----ht~~vk~i~FsENG 401 (506)
T KOG0289|consen 350 YTSAAFHPDGLIFGTGTP---------------DG-VVKIWDLKS---QTNVAKFP-----G----HTGPVKAISFSENG 401 (506)
T ss_pred eEEeeEcCCceEEeccCC---------------Cc-eEEEEEcCC---ccccccCC-----C----CCCceeEEEeccCc
Confidence 556899999965554222 22 343344332 22233222 1 12457789999999
Q ss_pred CEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEE
Q psy11412 192 RYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRI 271 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L 271 (290)
=+|.++. .++.|.+||+.. .+...++..... .....+.|++.|++|
T Consensus 402 Y~Lat~a-dd~~V~lwDLRK---l~n~kt~~l~~~------------------------------~~v~s~~fD~SGt~L 447 (506)
T KOG0289|consen 402 YWLATAA-DDGSVKLWDLRK---LKNFKTIQLDEK------------------------------KEVNSLSFDQSGTYL 447 (506)
T ss_pred eEEEEEe-cCCeEEEEEehh---hcccceeecccc------------------------------ccceeEEEcCCCCeE
Confidence 9999988 677799999954 233334333221 136779999999999
Q ss_pred EEEcC
Q psy11412 272 YVSSS 276 (290)
Q Consensus 272 ~Van~ 276 (290)
..+.+
T Consensus 448 ~~~g~ 452 (506)
T KOG0289|consen 448 GIAGS 452 (506)
T ss_pred Eeecc
Confidence 88865
No 105
>KOG0310|consensus
Probab=98.06 E-value=4.4e-05 Score=73.08 Aligned_cols=115 Identities=17% Similarity=0.247 Sum_probs=73.9
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
..++++.|-.||+.|+..+ .+|.|.+||... ...+.++... ..|
T Consensus 69 ~~v~s~~fR~DG~LlaaGD-~sG~V~vfD~k~---r~iLR~~~ah--------------------------------~ap 112 (487)
T KOG0310|consen 69 DVVYSVDFRSDGRLLAAGD-ESGHVKVFDMKS---RVILRQLYAH--------------------------------QAP 112 (487)
T ss_pred cceeEEEeecCCeEEEccC-CcCcEEEecccc---HHHHHHHhhc--------------------------------cCc
Confidence 3678999999999887655 589999999533 1112111111 245
Q ss_pred eE-EEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCC-CCceeEEEEccC
Q psy11412 113 QM-FQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPA-RSMVTDILISLD 190 (290)
Q Consensus 113 r~-vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~-~~~~~~i~~SpD 190 (290)
-| +-|+|++.++++... |+.....|++.. ..... .+.+ ...+...+++|-
T Consensus 113 v~~~~f~~~d~t~l~s~s---------------Dd~v~k~~d~s~---a~v~~----------~l~~htDYVR~g~~~~~ 164 (487)
T KOG0310|consen 113 VHVTKFSPQDNTMLVSGS---------------DDKVVKYWDLST---AYVQA----------ELSGHTDYVRCGDISPA 164 (487)
T ss_pred eeEEEecccCCeEEEecC---------------CCceEEEEEcCC---cEEEE----------EecCCcceeEeeccccC
Confidence 44 559999999998765 233332233221 00100 1111 246778899999
Q ss_pred CCEEEEEeCCCCcEEEEEecC
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d 211 (290)
...+.+|+-.++.|.+||+..
T Consensus 165 ~~hivvtGsYDg~vrl~DtR~ 185 (487)
T KOG0310|consen 165 NDHIVVTGSYDGKVRLWDTRS 185 (487)
T ss_pred CCeEEEecCCCceEEEEEecc
Confidence 998889887899999999853
No 106
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.06 E-value=0.00017 Score=69.94 Aligned_cols=29 Identities=10% Similarity=0.057 Sum_probs=19.8
Q ss_pred EEEEEcCCCCE-EEE-EeC-CCCeEEEEEcCC
Q psy11412 36 TDILISLDDRY-LYT-SNW-MHGDIRQYDIRD 64 (290)
Q Consensus 36 ~~va~SpDGr~-Lyv-a~~-~~g~V~v~dv~d 64 (290)
..-.+||||++ +|. +.. ....|.++|+..
T Consensus 191 ~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~t 222 (419)
T PRK04043 191 IFPKWANKEQTAFYYTSYGERKPTLYKYNLYT 222 (419)
T ss_pred EeEEECCCCCcEEEEEEccCCCCEEEEEECCC
Confidence 36789999985 664 443 245688888854
No 107
>KOG0284|consensus
Probab=98.04 E-value=6.7e-05 Score=70.68 Aligned_cols=175 Identities=17% Similarity=0.220 Sum_probs=102.4
Q ss_pred CCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeecccc
Q psy11412 29 DKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRF 108 (290)
Q Consensus 29 ~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 108 (290)
.++...+..|..+|+||+|.+++. +|.+.+|+...- .-+.+ .+.|.
T Consensus 93 NKvkc~V~~v~WtPeGRRLltgs~-SGEFtLWNg~~f-nFEti------------------------lQaHD-------- 138 (464)
T KOG0284|consen 93 NKVKCPVNVVRWTPEGRRLLTGSQ-SGEFTLWNGTSF-NFETI------------------------LQAHD-------- 138 (464)
T ss_pred cccccceeeEEEcCCCceeEeecc-cccEEEecCcee-eHHHH------------------------hhhhc--------
Confidence 456667788999999999998875 899999985210 00000 00110
Q ss_pred CCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEc
Q psy11412 109 TGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILIS 188 (290)
Q Consensus 109 g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~S 188 (290)
+.+|.|..|.+|.++...+. ++.+..|+..- +.+..+.. ......++++||
T Consensus 139 -s~Vr~m~ws~~g~wmiSgD~----------------gG~iKyWqpnm----nnVk~~~a--------hh~eaIRdlafS 189 (464)
T KOG0284|consen 139 -SPVRTMKWSHNGTWMISGDK----------------GGMIKYWQPNM----NNVKIIQA--------HHAEAIRDLAFS 189 (464)
T ss_pred -ccceeEEEccCCCEEEEcCC----------------CceEEecccch----hhhHHhhH--------hhhhhhheeccC
Confidence 46789999999998886543 33333333210 01111000 011346789999
Q ss_pred c-CCCEEEEEeCCCCcEEEEEecCCCCceEe----------------eEEeeCceecCCCceEEecCCCCCCCCCcceee
Q psy11412 189 L-DDRYLYTSNWMHGDIRQYDIRDTAHPVLV----------------GQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIK 251 (290)
Q Consensus 189 p-DGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v----------------~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~ 251 (290)
| |-+||-+| ++|+|.+||-..+...+.+ +-|.+| ++|+.|++||++.-... .++-
T Consensus 190 pnDskF~t~S--dDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasg---skDnlVKlWDprSg~cl---~tlh 261 (464)
T KOG0284|consen 190 PNDSKFLTCS--DDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASG---SKDNLVKLWDPRSGSCL---ATLH 261 (464)
T ss_pred CCCceeEEec--CCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEc---cCCceeEeecCCCcchh---hhhh
Confidence 9 45554333 6999999998643221111 112222 46788999997652210 0111
Q ss_pred cccccCCcceEEEccCCCEEEEEcC
Q psy11412 252 GRRFTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 252 ~~~~~~~P~~~a~sPDG~~L~Van~ 276 (290)
+.+ ...-.+.|+|+|.+|+.++.
T Consensus 262 ~HK--ntVl~~~f~~n~N~Llt~sk 284 (464)
T KOG0284|consen 262 GHK--NTVLAVKFNPNGNWLLTGSK 284 (464)
T ss_pred hcc--ceEEEEEEcCCCCeeEEccC
Confidence 111 13677899999999999865
No 108
>KOG0265|consensus
Probab=98.00 E-value=0.00024 Score=64.79 Aligned_cols=186 Identities=16% Similarity=0.162 Sum_probs=109.4
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
.+-++-+.|+|||.+++++++ +..|.+|++...-+. ...++ |+ . +.
T Consensus 47 ~geI~~~~F~P~gs~~aSgG~-Dr~I~LWnv~gdceN--~~~lk-gH---------------------s---------gA 92 (338)
T KOG0265|consen 47 KGEIYTIKFHPDGSCFASGGS-DRAIVLWNVYGDCEN--FWVLK-GH---------------------S---------GA 92 (338)
T ss_pred cceEEEEEECCCCCeEeecCC-cceEEEEeccccccc--eeeec-cc---------------------c---------ce
Confidence 345677899999999987765 789999997542211 11111 11 0 34
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDD 191 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDG 191 (290)
.-.+.|.+|++.+|.++. +.++..||+.. .+.++. ..+ .......+.-+.-|
T Consensus 93 VM~l~~~~d~s~i~S~gt----------------Dk~v~~wD~~t---G~~~rk-----~k~----h~~~vNs~~p~rrg 144 (338)
T KOG0265|consen 93 VMELHGMRDGSHILSCGT----------------DKTVRGWDAET---GKRIRK-----HKG----HTSFVNSLDPSRRG 144 (338)
T ss_pred eEeeeeccCCCEEEEecC----------------CceEEEEeccc---ceeeeh-----hcc----ccceeeecCccccC
Confidence 667899999999998754 23444455433 222221 000 11344556666678
Q ss_pred CEEEEEeCCCCcEEEEEecCCCCce------EeeEEe---eCcee---cCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 192 RYLYTSNWMHGDIRQYDIRDTAHPV------LVGQIF---LGGKI---QSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d~~~~~------~v~~i~---~Gg~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
-.|..|...++++.+||+...+..+ .+..+. .+.++ .=|+.+.+||...++.. -.++|.. +-.
T Consensus 145 ~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~---~~lsGh~--DtI 219 (338)
T KOG0265|consen 145 PQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGL---YTLSGHA--DTI 219 (338)
T ss_pred CeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeeccccCceeeeccccCcce---EEeeccc--Cce
Confidence 8999999889999999996322211 111110 11111 23567888987443211 1223332 236
Q ss_pred ceEEEccCCCEEEEEcC--CCCCCCcc
Q psy11412 260 QMFQLSLDGKRIYVSSS--LFSPWDKE 284 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~--~~~~~~~~ 284 (290)
-++.+||+|.+|..-.. +...||..
T Consensus 220 t~lsls~~gs~llsnsMd~tvrvwd~r 246 (338)
T KOG0265|consen 220 TGLSLSRYGSFLLSNSMDNTVRVWDVR 246 (338)
T ss_pred eeEEeccCCCccccccccceEEEEEec
Confidence 88999999999986433 55556543
No 109
>KOG1274|consensus
Probab=98.00 E-value=0.00012 Score=74.85 Aligned_cols=145 Identities=15% Similarity=0.183 Sum_probs=83.8
Q ss_pred eEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEe
Q psy11412 10 KADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVI 89 (290)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~ 89 (290)
.+-|+++..+...+..+ -...+-+.++.++|.|.+|+|+.- +|+|.+|++++......+. + +.+
T Consensus 118 ~~vK~~~~~D~s~~~~l--rgh~apVl~l~~~p~~~fLAvss~-dG~v~iw~~~~~~~~~tl~-----~-v~k------- 181 (933)
T KOG1274|consen 118 TAVKLLNLDDSSQEKVL--RGHDAPVLQLSYDPKGNFLAVSSC-DGKVQIWDLQDGILSKTLT-----G-VDK------- 181 (933)
T ss_pred eeEEEEeccccchheee--cccCCceeeeeEcCCCCEEEEEec-CceEEEEEcccchhhhhcc-----c-CCc-------
Confidence 34578888766555543 235667889999999999999975 8999999998732111111 1 000
Q ss_pred cCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCcc
Q psy11412 90 DDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLS 169 (290)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~ 169 (290)
+.+.... .---.+++||+|..|.+... .+.+-++.. .+ +..... ++. .
T Consensus 182 -~n~~~~s------------~i~~~~aW~Pk~g~la~~~~-d~~Vkvy~r-----~~-we~~f~---------Lr~---~ 229 (933)
T KOG1274|consen 182 -DNEFILS------------RICTRLAWHPKGGTLAVPPV-DNTVKVYSR-----KG-WELQFK---------LRD---K 229 (933)
T ss_pred -ccccccc------------ceeeeeeecCCCCeEEeecc-CCeEEEEcc-----CC-ceehee---------ecc---c
Confidence 0000000 11223789999766666543 111111110 01 111011 000 0
Q ss_pred ccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 170 SLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 170 ~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
. ....-..+.+||.|+||+++. .+|.|.|||+.
T Consensus 230 ------~-~ss~~~~~~wsPnG~YiAAs~-~~g~I~vWnv~ 262 (933)
T KOG1274|consen 230 ------L-SSSKFSDLQWSPNGKYIAAST-LDGQILVWNVD 262 (933)
T ss_pred ------c-cccceEEEEEcCCCcEEeeec-cCCcEEEEecc
Confidence 0 001246789999999999888 89999999996
No 110
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=98.00 E-value=0.00091 Score=61.21 Aligned_cols=145 Identities=15% Similarity=0.185 Sum_probs=87.3
Q ss_pred EEEecC--CCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEec
Q psy11412 13 KVIDIP--AKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVID 90 (290)
Q Consensus 13 ~~~~~~--~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~ 90 (290)
.++||- ++.++... ..+.++-.++.+| |+++||+++ ++-+.++|+.++..|.+.+.....
T Consensus 109 ~IvDIS~P~sP~~~~~--lnt~gyaygv~vs--Gn~aYVadl-ddgfLivdvsdpssP~lagrya~~------------- 170 (370)
T COG5276 109 RIVDISTPDSPTLIGF--LNTDGYAYGVYVS--GNYAYVADL-DDGFLIVDVSDPSSPQLAGRYALP------------- 170 (370)
T ss_pred EEEeccCCCCcceecc--ccCCceEEEEEec--CCEEEEeec-cCcEEEEECCCCCCceeeeeeccC-------------
Confidence 455664 44444332 2344566666664 999999999 556889999998888877643221
Q ss_pred CCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccc
Q psy11412 91 DPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSS 170 (290)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~ 170 (290)
+...++++.| |+++|++.- ++ -+.++|+.+...+..+..
T Consensus 171 ------------------~~d~~~v~IS--Gn~AYvA~~---------------d~-GL~ivDVSnp~sPvli~~----- 209 (370)
T COG5276 171 ------------------GGDTHDVAIS--GNYAYVAWR---------------DG-GLTIVDVSNPHSPVLIGS----- 209 (370)
T ss_pred ------------------CCCceeEEEe--cCeEEEEEe---------------CC-CeEEEEccCCCCCeEEEE-----
Confidence 1233667765 789999753 23 244566655322222211
Q ss_pred cCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeC
Q psy11412 171 LGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 224 (290)
Q Consensus 171 ~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~G 224 (290)
-.| ++..+.+.+|++ +.|+.. .+..|.+.|++++..+.+.+...+.
T Consensus 210 -~n~----g~g~~sv~vsdn--r~y~vv-y~egvlivd~s~~ssp~~~gsyet~ 255 (370)
T COG5276 210 -YNT----GPGTYSVSVSDN--RAYLVV-YDEGVLIVDVSGPSSPTVFGSYETS 255 (370)
T ss_pred -Eec----CCceEEEEecCC--eeEEEE-cccceEEEecCCCCCceEeeccccC
Confidence 011 124566666665 556666 4556888999888777777766553
No 111
>KOG2110|consensus
Probab=97.99 E-value=0.00051 Score=64.12 Aligned_cols=170 Identities=18% Similarity=0.200 Sum_probs=95.7
Q ss_pred eEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEe
Q psy11412 10 KADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVI 89 (290)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~ 89 (290)
..-+++++.++.+.-.. .-+...-.|-+ .-++|.|.-. +.|.+||+.+ .+++.++..-
T Consensus 68 r~Lkv~~~Kk~~~ICe~---~fpt~IL~Vrm--Nr~RLvV~Le--e~IyIydI~~---MklLhTI~t~------------ 125 (391)
T KOG2110|consen 68 RKLKVVHFKKKTTICEI---FFPTSILAVRM--NRKRLVVCLE--ESIYIYDIKD---MKLLHTIETT------------ 125 (391)
T ss_pred ceEEEEEcccCceEEEE---ecCCceEEEEE--ccceEEEEEc--ccEEEEeccc---ceeehhhhcc------------
Confidence 45667777766654433 23444445555 4567766643 5699999976 5665544221
Q ss_pred cCCCCcCCCCcceeeccccCCCce-EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCc
Q psy11412 90 DDPELDKQPDPVIIKGRRFTGSSQ-MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPL 168 (290)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~gPr-~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~ 168 (290)
| ..|. -.||||+..-.|++=... .+.+.+.++++.+. +.+..+.
T Consensus 126 --------~-----------~n~~gl~AlS~n~~n~ylAyp~s------------~t~GdV~l~d~~nl---~~v~~I~- 170 (391)
T KOG2110|consen 126 --------P-----------PNPKGLCALSPNNANCYLAYPGS------------TTSGDVVLFDTINL---QPVNTIN- 170 (391)
T ss_pred --------C-----------CCccceEeeccCCCCceEEecCC------------CCCceEEEEEcccc---eeeeEEE-
Confidence 0 1232 245666554334432210 11223444555442 1111111
Q ss_pred cccCccccCCCCceeEEEEccCCCEEEEEeCCCCc-EEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCc
Q psy11412 169 SSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGD-IRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDP 247 (290)
Q Consensus 169 ~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~-V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~ 247 (290)
...+..+.++||+||..|+++. ..|+ |+||++.+ ...+.+..-|-. |
T Consensus 171 --------aH~~~lAalafs~~G~llATAS-eKGTVIRVf~v~~---G~kl~eFRRG~~------------------~-- 218 (391)
T KOG2110|consen 171 --------AHKGPLAALAFSPDGTLLATAS-EKGTVIRVFSVPE---GQKLYEFRRGTY------------------P-- 218 (391)
T ss_pred --------ecCCceeEEEECCCCCEEEEec-cCceEEEEEEcCC---ccEeeeeeCCce------------------e--
Confidence 0124567899999999999887 4555 78998854 334444433331 0
Q ss_pred ceeecccccCCcceEEEccCCCEEEEEcCC
Q psy11412 248 VIIKGRRFTGSSQMFQLSLDGKRIYVSSSL 277 (290)
Q Consensus 248 ~~~~~~~~~~~P~~~a~sPDG~~L~Van~~ 277 (290)
-.-..++|+||+++|.+++++
T Consensus 219 ---------~~IySL~Fs~ds~~L~~sS~T 239 (391)
T KOG2110|consen 219 ---------VSIYSLSFSPDSQFLAASSNT 239 (391)
T ss_pred ---------eEEEEEEECCCCCeEEEecCC
Confidence 145789999999999999774
No 112
>KOG1407|consensus
Probab=97.98 E-value=0.00031 Score=63.04 Aligned_cols=152 Identities=19% Similarity=0.203 Sum_probs=97.1
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+..++.+|...=++++..++.+|++||+.. .+.+.++..- .+--
T Consensus 66 svdql~w~~~~~d~~atas~dk~ir~wd~r~---~k~~~~i~~~--------------------------------~eni 110 (313)
T KOG1407|consen 66 SVDQLCWDPKHPDLFATASGDKTIRIWDIRS---GKCTARIETK--------------------------------GENI 110 (313)
T ss_pred chhhheeCCCCCcceEEecCCceEEEEEecc---CcEEEEeecc--------------------------------Ccce
Confidence 4556777777666777777889999999865 3444433221 2345
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.++.+|+|.+..+.|. ++ .+..++... .+.+...+ -.-...++.++-++.+
T Consensus 111 ~i~wsp~g~~~~~~~k---------------dD-~it~id~r~---~~~~~~~~----------~~~e~ne~~w~~~nd~ 161 (313)
T KOG1407|consen 111 NITWSPDGEYIAVGNK---------------DD-RITFIDART---YKIVNEEQ----------FKFEVNEISWNNSNDL 161 (313)
T ss_pred EEEEcCCCCEEEEecC---------------cc-cEEEEEecc---cceeehhc----------ccceeeeeeecCCCCE
Confidence 5899999999999876 22 232233322 22222100 1124567889988988
Q ss_pred EEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEE
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYV 273 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~V 273 (290)
.+.++ |.|.|.+..-. .++.+..|.. |+ ..=--+.|+|+||++++
T Consensus 162 Fflt~-GlG~v~ILsyp---sLkpv~si~A----------------------H~---------snCicI~f~p~GryfA~ 206 (313)
T KOG1407|consen 162 FFLTN-GLGCVEILSYP---SLKPVQSIKA----------------------HP---------SNCICIEFDPDGRYFAT 206 (313)
T ss_pred EEEec-CCceEEEEecc---cccccccccc----------------------CC---------cceEEEEECCCCceEee
Confidence 88888 88999887553 2344444321 00 12356999999999999
Q ss_pred EcC--CCCCCCcc
Q psy11412 274 SSS--LFSPWDKE 284 (290)
Q Consensus 274 an~--~~~~~~~~ 284 (290)
..+ +-|-||.+
T Consensus 207 GsADAlvSLWD~~ 219 (313)
T KOG1407|consen 207 GSADALVSLWDVD 219 (313)
T ss_pred ccccceeeccChh
Confidence 876 88889853
No 113
>KOG0271|consensus
Probab=97.97 E-value=6.7e-05 Score=70.31 Aligned_cols=109 Identities=17% Similarity=0.239 Sum_probs=71.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+.++.||||+|+++++.. +.+|++|+-.+ .+.++++. +|| ..+.
T Consensus 369 lVn~V~fSPd~r~IASaSF-DkSVkLW~g~t---Gk~lasfR--------GHv-----------------------~~VY 413 (480)
T KOG0271|consen 369 LVNHVSFSPDGRYIASASF-DKSVKLWDGRT---GKFLASFR--------GHV-----------------------AAVY 413 (480)
T ss_pred heeeEEECCCccEEEEeec-ccceeeeeCCC---cchhhhhh--------hcc-----------------------ceeE
Confidence 5789999999999998876 78999999765 33333221 111 3567
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCC-CceeEEEEccCCC
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPAR-SMVTDILISLDDR 192 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~~~~~i~~SpDGr 192 (290)
.++.|.|-|.|...+. +.++.++++.. ++... ++|+. ..++.+..||||.
T Consensus 414 qvawsaDsRLlVS~Sk----------------DsTLKvw~V~t---kKl~~----------DLpGh~DEVf~vDwspDG~ 464 (480)
T KOG0271|consen 414 QVAWSADSRLLVSGSK----------------DSTLKVWDVRT---KKLKQ----------DLPGHADEVFAVDWSPDGQ 464 (480)
T ss_pred EEEeccCccEEEEcCC----------------CceEEEEEeee---eeecc----------cCCCCCceEEEEEecCCCc
Confidence 7999999987665433 23555566543 22222 35544 5789999999999
Q ss_pred EEEEEeCCCCcEEEE
Q psy11412 193 YLYTSNWMHGDIRQY 207 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~ 207 (290)
++ +|..-+.-+.+|
T Consensus 465 rV-~sggkdkv~~lw 478 (480)
T KOG0271|consen 465 RV-ASGGKDKVLRLW 478 (480)
T ss_pred ee-ecCCCceEEEee
Confidence 86 455345555555
No 114
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.97 E-value=3.6e-05 Score=69.96 Aligned_cols=64 Identities=27% Similarity=0.313 Sum_probs=49.1
Q ss_pred EEEccCCCEEEEEeCC----CCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcc
Q psy11412 185 ILISLDDRYLYTSNWM----HGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 260 (290)
Q Consensus 185 i~~SpDGr~Lyvs~r~----~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (290)
=+|||||++||++.-+ .+.|-|||.. .....++++++=|- +|.
T Consensus 119 Gvfs~dG~~LYATEndfd~~rGViGvYd~r--~~fqrvgE~~t~Gi-------------------------------GpH 165 (366)
T COG3490 119 GVFSPDGRLLYATENDFDPNRGVIGVYDAR--EGFQRVGEFSTHGI-------------------------------GPH 165 (366)
T ss_pred cccCCCCcEEEeecCCCCCCCceEEEEecc--cccceecccccCCc-------------------------------Ccc
Confidence 3699999999998632 2578899885 34556777766442 799
Q ss_pred eEEEccCCCEEEEEcCCCCCC
Q psy11412 261 MFQLSLDGKRIYVSSSLFSPW 281 (290)
Q Consensus 261 ~~a~sPDG~~L~Van~~~~~~ 281 (290)
.|.+.+||++|.+||..+-.+
T Consensus 166 ev~lm~DGrtlvvanGGIeth 186 (366)
T COG3490 166 EVTLMADGRTLVVANGGIETH 186 (366)
T ss_pred eeEEecCCcEEEEeCCceecc
Confidence 999999999999999955443
No 115
>KOG0286|consensus
Probab=97.97 E-value=0.0005 Score=62.58 Aligned_cols=162 Identities=15% Similarity=0.152 Sum_probs=97.2
Q ss_pred EecCCCccCCCCCCCCCCCceEEEEEcC-CCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCC
Q psy11412 15 IDIPAKQVQGYPGGDKVPAMVTDILISL-DDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPE 93 (290)
Q Consensus 15 ~~~~~~~~~~~~~~~~v~~~p~~va~Sp-DGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~ 93 (290)
-||+.++-..... -=.+-+.+++++| |+++. +++.-+..-.+||++++ ...+.. .|+
T Consensus 171 WDie~g~~~~~f~--GH~gDV~slsl~p~~~ntF-vSg~cD~~aklWD~R~~---~c~qtF-~gh--------------- 228 (343)
T KOG0286|consen 171 WDIETGQQTQVFH--GHTGDVMSLSLSPSDGNTF-VSGGCDKSAKLWDVRSG---QCVQTF-EGH--------------- 228 (343)
T ss_pred EEcccceEEEEec--CCcccEEEEecCCCCCCeE-EecccccceeeeeccCc---ceeEee-ccc---------------
Confidence 3666544333220 1133577899999 77765 55556889999999763 333322 221
Q ss_pred CcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCc
Q psy11412 94 LDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGS 173 (290)
Q Consensus 94 ~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~ 173 (290)
.+-...+.|+|+|.-+...++ ++ .- ...|++..++++.....
T Consensus 229 ---------------esDINsv~ffP~G~afatGSD---------------D~-tc---RlyDlRaD~~~a~ys~~---- 270 (343)
T KOG0286|consen 229 ---------------ESDINSVRFFPSGDAFATGSD---------------DA-TC---RLYDLRADQELAVYSHD---- 270 (343)
T ss_pred ---------------ccccceEEEccCCCeeeecCC---------------Cc-ee---EEEeecCCcEEeeeccC----
Confidence 145777999999986665443 11 11 22232223333321100
Q ss_pred cccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecc
Q psy11412 174 WKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGR 253 (290)
Q Consensus 174 ~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 253 (290)
........++||.-||.||+.- .+.++.|||.-. .++++.+ .|..
T Consensus 271 ---~~~~gitSv~FS~SGRlLfagy-~d~~c~vWDtlk---~e~vg~L-~GHe--------------------------- 315 (343)
T KOG0286|consen 271 ---SIICGITSVAFSKSGRLLFAGY-DDFTCNVWDTLK---GERVGVL-AGHE--------------------------- 315 (343)
T ss_pred ---cccCCceeEEEcccccEEEeee-cCCceeEeeccc---cceEEEe-eccC---------------------------
Confidence 0113567899999999999875 788999999853 2333332 2321
Q ss_pred cccCCcceEEEccCCCEEEEE
Q psy11412 254 RFTGSSQMFQLSLDGKRIYVS 274 (290)
Q Consensus 254 ~~~~~P~~~a~sPDG~~L~Va 274 (290)
+...-+.++|||.-|...
T Consensus 316 ---NRvScl~~s~DG~av~Tg 333 (343)
T KOG0286|consen 316 ---NRVSCLGVSPDGMAVATG 333 (343)
T ss_pred ---CeeEEEEECCCCcEEEec
Confidence 256779999999877664
No 116
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.96 E-value=0.00027 Score=65.79 Aligned_cols=112 Identities=17% Similarity=0.232 Sum_probs=65.4
Q ss_pred CCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEcc
Q psy11412 110 GSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISL 189 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~Sp 189 (290)
..|++|+|||||++||++....+.+..+.++. ..+..-....... . .. ++..|=++++..
T Consensus 163 ~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~--~~g~~~~~~~~~~-------~----------~~-~~G~PDG~~vDa 222 (307)
T COG3386 163 TIPNGLAFSPDGKTLYVADTPANRIHRYDLDP--ATGPIGGRRGFVD-------F----------DE-EPGLPDGMAVDA 222 (307)
T ss_pred EecCceEECCCCCEEEEEeCCCCeEEEEecCc--ccCccCCcceEEE-------c----------cC-CCCCCCceEEeC
Confidence 46889999999999999987655554443321 0110000000000 0 00 123445689999
Q ss_pred CCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEE-ccCC
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQL-SLDG 268 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~-sPDG 268 (290)
||..-.++.++.+.|.+|+- . .++++.+.+... .|.+.+| .|++
T Consensus 223 dG~lw~~a~~~g~~v~~~~p---d-G~l~~~i~lP~~-------------------------------~~t~~~FgG~~~ 267 (307)
T COG3386 223 DGNLWVAAVWGGGRVVRFNP---D-GKLLGEIKLPVK-------------------------------RPTNPAFGGPDL 267 (307)
T ss_pred CCCEEEecccCCceEEEECC---C-CcEEEEEECCCC-------------------------------CCccceEeCCCc
Confidence 99863355544458998854 2 566776655421 4666666 4677
Q ss_pred CEEEEEcC
Q psy11412 269 KRIYVSSS 276 (290)
Q Consensus 269 ~~L~Van~ 276 (290)
++|||++.
T Consensus 268 ~~L~iTs~ 275 (307)
T COG3386 268 NTLYITSA 275 (307)
T ss_pred CEEEEEec
Confidence 88888865
No 117
>KOG0643|consensus
Probab=97.94 E-value=0.00051 Score=61.91 Aligned_cols=155 Identities=18% Similarity=0.154 Sum_probs=94.1
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
+.++.+.++-+-++|.+. ..+.++++||+.. .+++.+++.+ ..+
T Consensus 53 GavW~~Did~~s~~liTG-SAD~t~kLWDv~t---Gk~la~~k~~--------------------------------~~V 96 (327)
T KOG0643|consen 53 GAVWCCDIDWDSKHLITG-SADQTAKLWDVET---GKQLATWKTN--------------------------------SPV 96 (327)
T ss_pred ceEEEEEecCCcceeeec-cccceeEEEEcCC---CcEEEEeecC--------------------------------Cee
Confidence 367788999999988654 4688999999965 5666665554 567
Q ss_pred eEEEEccCCCEEEEEcC--CCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCC-CceeEEEEcc
Q psy11412 113 QMFQLSLDGKRIYVSSS--LFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPAR-SMVTDILISL 189 (290)
Q Consensus 113 r~vafsPdG~~lYv~ne--l~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~~~~~i~~Sp 189 (290)
+.+-|+++|.++.++.+ |+. ...+...++.+... .....-|.. .++.+ ..+..+..+|
T Consensus 97 k~~~F~~~gn~~l~~tD~~mg~-------------~~~v~~fdi~~~~~-~~~s~ep~~-----kI~t~~skit~a~Wg~ 157 (327)
T KOG0643|consen 97 KRVDFSFGGNLILASTDKQMGY-------------TCFVSVFDIRDDSS-DIDSEEPYL-----KIPTPDSKITSALWGP 157 (327)
T ss_pred EEEeeccCCcEEEEEehhhcCc-------------ceEEEEEEccCChh-hhcccCceE-----EecCCccceeeeeecc
Confidence 88999999988776654 211 11222222221000 000000000 11111 3456678999
Q ss_pred CCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCC
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGK 269 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~ 269 (290)
=|+++.+.. .+++|+.||+... ...+.. ... | ...-++|.||||..
T Consensus 158 l~~~ii~Gh-e~G~is~~da~~g--~~~v~s---~~~-------------------h---------~~~Ind~q~s~d~T 203 (327)
T KOG0643|consen 158 LGETIIAGH-EDGSISIYDARTG--KELVDS---DEE-------------------H---------SSKINDLQFSRDRT 203 (327)
T ss_pred cCCEEEEec-CCCcEEEEEcccC--ceeeec---hhh-------------------h---------ccccccccccCCcc
Confidence 999987666 7899999998541 123321 110 0 11467899999999
Q ss_pred EEEEEcC
Q psy11412 270 RIYVSSS 276 (290)
Q Consensus 270 ~L~Van~ 276 (290)
+...++.
T Consensus 204 ~FiT~s~ 210 (327)
T KOG0643|consen 204 YFITGSK 210 (327)
T ss_pred eEEeccc
Confidence 8888765
No 118
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=97.91 E-value=5.3e-05 Score=48.58 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=26.3
Q ss_pred CCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeec
Q psy11412 42 LDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 77 (290)
Q Consensus 42 pDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g 77 (290)
|||++||++|.++++|.++|..+ .+.+..+.+|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~---~~~~~~i~vg 33 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTAT---NKVIATIPVG 33 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCC---CeEEEEEECC
Confidence 79999999999999999999743 4556555553
No 119
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=97.89 E-value=0.0005 Score=65.35 Aligned_cols=18 Identities=17% Similarity=0.464 Sum_probs=15.4
Q ss_pred CCceEEEEccCCCEEEEEcC
Q psy11412 110 GSSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~ne 129 (290)
..|++|+|.++| |||++.
T Consensus 72 ~~p~Gi~~~~~G--lyV~~~ 89 (367)
T TIGR02604 72 SMVTGLAVAVGG--VYVATP 89 (367)
T ss_pred CCccceeEecCC--EEEeCC
Confidence 478999999999 998765
No 120
>KOG0282|consensus
Probab=97.88 E-value=0.00013 Score=69.98 Aligned_cols=148 Identities=16% Similarity=0.137 Sum_probs=85.1
Q ss_pred EEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCC
Q psy11412 14 VIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPE 93 (290)
Q Consensus 14 ~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~ 93 (290)
-.||...+|+... +.--+.+..|.|-++|++.+++. .+.+|++|+...+...+.+....+.
T Consensus 326 ~wDiRs~kvvqeY--d~hLg~i~~i~F~~~g~rFissS-Ddks~riWe~~~~v~ik~i~~~~~h---------------- 386 (503)
T KOG0282|consen 326 QWDIRSGKVVQEY--DRHLGAILDITFVDEGRRFISSS-DDKSVRIWENRIPVPIKNIADPEMH---------------- 386 (503)
T ss_pred EEeccchHHHHHH--HhhhhheeeeEEccCCceEeeec-cCccEEEEEcCCCccchhhcchhhc----------------
Confidence 3466665554432 12233577899999999987776 4789999998764333333211110
Q ss_pred CcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCc
Q psy11412 94 LDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGS 173 (290)
Q Consensus 94 ~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~ 173 (290)
+.| .++++|+|+++..=+ +.+ .+.+..+.. ..+......++|
T Consensus 387 ----------------smP-~~~~~P~~~~~~aQs-~dN---------------~i~ifs~~~-----~~r~nkkK~feG 428 (503)
T KOG0282|consen 387 ----------------TMP-CLTLHPNGKWFAAQS-MDN---------------YIAIFSTVP-----PFRLNKKKRFEG 428 (503)
T ss_pred ----------------cCc-ceecCCCCCeehhhc-cCc---------------eEEEEeccc-----ccccCHhhhhcc
Confidence 233 389999999877522 221 222122111 111111122233
Q ss_pred cccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeC
Q psy11412 174 WKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 224 (290)
Q Consensus 174 ~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~G 224 (290)
.. ..+.+-.+.|||||++|...+ +++.+.+||-.. -+++..+.+.
T Consensus 429 h~--vaGys~~v~fSpDG~~l~SGd-sdG~v~~wdwkt---~kl~~~lkah 473 (503)
T KOG0282|consen 429 HS--VAGYSCQVDFSPDGRTLCSGD-SDGKVNFWDWKT---TKLVSKLKAH 473 (503)
T ss_pred ee--ccCceeeEEEcCCCCeEEeec-CCccEEEeechh---hhhhhccccC
Confidence 11 124567799999999998888 899999999742 2344444443
No 121
>KOG0286|consensus
Probab=97.86 E-value=0.00064 Score=61.90 Aligned_cols=153 Identities=14% Similarity=0.152 Sum_probs=91.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
+.....|-+|+..| +..++.+..+||++.+ +.+.. ..|+ .+-.-
T Consensus 147 ylScC~f~dD~~il--T~SGD~TCalWDie~g---~~~~~-f~GH------------------------------~gDV~ 190 (343)
T KOG0286|consen 147 YLSCCRFLDDNHIL--TGSGDMTCALWDIETG---QQTQV-FHGH------------------------------TGDVM 190 (343)
T ss_pred eeEEEEEcCCCceE--ecCCCceEEEEEcccc---eEEEE-ecCC------------------------------cccEE
Confidence 55567787777665 3446889999999762 33322 2232 14567
Q ss_pred EEEEcc-CCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 114 MFQLSL-DGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 114 ~vafsP-dG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
.+.++| +++++. +..- +. ...+||+.+ ..-.++ +.+ .......|.|-|+|-
T Consensus 191 slsl~p~~~ntFv-Sg~c--------------D~-~aklWD~R~---~~c~qt-----F~g----hesDINsv~ffP~G~ 242 (343)
T KOG0286|consen 191 SLSLSPSDGNTFV-SGGC--------------DK-SAKLWDVRS---GQCVQT-----FEG----HESDINSVRFFPSGD 242 (343)
T ss_pred EEecCCCCCCeEE-eccc--------------cc-ceeeeeccC---cceeEe-----ecc----cccccceEEEccCCC
Confidence 799999 777655 4331 11 222344432 122222 111 124567899999997
Q ss_pred EEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEE
Q psy11412 193 YLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIY 272 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~ 272 (290)
- +++.-.+++.++||+.. -..++.+.-.. + -.+..+++||..||+||
T Consensus 243 a-fatGSDD~tcRlyDlRa---D~~~a~ys~~~---------------------------~--~~gitSv~FS~SGRlLf 289 (343)
T KOG0286|consen 243 A-FATGSDDATCRLYDLRA---DQELAVYSHDS---------------------------I--ICGITSVAFSKSGRLLF 289 (343)
T ss_pred e-eeecCCCceeEEEeecC---CcEEeeeccCc---------------------------c--cCCceeEEEcccccEEE
Confidence 6 45555889999999942 12333332111 0 01468899999999999
Q ss_pred EEcC--CCCCCCc
Q psy11412 273 VSSS--LFSPWDK 283 (290)
Q Consensus 273 Van~--~~~~~~~ 283 (290)
+.-. .-..||-
T Consensus 290 agy~d~~c~vWDt 302 (343)
T KOG0286|consen 290 AGYDDFTCNVWDT 302 (343)
T ss_pred eeecCCceeEeec
Confidence 9633 5567774
No 122
>KOG0319|consensus
Probab=97.85 E-value=0.0003 Score=70.48 Aligned_cols=183 Identities=16% Similarity=0.207 Sum_probs=106.7
Q ss_pred EEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceEEEE
Q psy11412 38 ILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQL 117 (290)
Q Consensus 38 va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vaf 117 (290)
+++|++|+.||.++. +.|-+.|+.+... . + +.+. . . . -.....+++
T Consensus 25 ~~~s~nG~~L~t~~~--d~Vi~idv~t~~~-~-l---~s~~-~--e---------------d---------~d~ita~~l 70 (775)
T KOG0319|consen 25 VAWSSNGQHLYTACG--DRVIIIDVATGSI-A-L---PSGS-N--E---------------D---------EDEITALAL 70 (775)
T ss_pred eeECCCCCEEEEecC--ceEEEEEccCCce-e-c---ccCC-c--c---------------c---------hhhhheeee
Confidence 899999999998874 5788888876321 1 1 1110 0 0 0 023445899
Q ss_pred ccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCEEEEE
Q psy11412 118 SLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYLYTS 197 (290)
Q Consensus 118 sPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs 197 (290)
+||+++||.+.. +..+.+++.. ....++ .|..-......-++|+|-|..|.+.
T Consensus 71 ~~d~~~L~~a~r----------------s~llrv~~L~---tgk~ir--------swKa~He~Pvi~ma~~~~g~LlAtg 123 (775)
T KOG0319|consen 71 TPDEEVLVTASR----------------SQLLRVWSLP---TGKLIR--------SWKAIHEAPVITMAFDPTGTLLATG 123 (775)
T ss_pred cCCccEEEEeec----------------cceEEEEEcc---cchHhH--------hHhhccCCCeEEEEEcCCCceEEec
Confidence 999999998754 2122222221 112222 2211112345679999999666555
Q ss_pred eCCCCcEEEEEecCC-------CCceEeeEEeeCcee--------cCCCceEEecCCCCCCCCCcceeecccccCCcceE
Q psy11412 198 NWMHGDIRQYDIRDT-------AHPVLVGQIFLGGKI--------QSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMF 262 (290)
Q Consensus 198 ~r~~~~V~v~Dv~d~-------~~~~~v~~i~~Gg~~--------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 262 (290)
+ .++.|.|||+... +.+-.+-.+.-+... .+|++|.||+..+.. +--..+... -+...++
T Consensus 124 g-aD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~--tcl~~~~~H--~S~vtsL 198 (775)
T KOG0319|consen 124 G-ADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKR--TCLHTMILH--KSAVTSL 198 (775)
T ss_pred c-ccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCc--hHHHHHHhh--hhheeee
Confidence 5 7899999999641 111112112111111 578889999976432 100011111 1368999
Q ss_pred EEccCCCEEEEEcC--CCCCCCcccC
Q psy11412 263 QLSLDGKRIYVSSS--LFSPWDKEIY 286 (290)
Q Consensus 263 a~sPDG~~L~Van~--~~~~~~~~~~ 286 (290)
+|++|+..++..++ ....||-+=|
T Consensus 199 ~~~~d~~~~ls~~RDkvi~vwd~~~~ 224 (775)
T KOG0319|consen 199 AFSEDSLELLSVGRDKVIIVWDLVQY 224 (775)
T ss_pred eeccCCceEEEeccCcEEEEeehhhh
Confidence 99999999998877 6777775444
No 123
>KOG0306|consensus
Probab=97.83 E-value=0.00061 Score=68.64 Aligned_cols=185 Identities=17% Similarity=0.212 Sum_probs=104.5
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccc--------------cCCCceEEecCCCC---c
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKI--------------QSDSGVTVIDDPEL---D 95 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~--------------~~~~~~~v~~~~~~---~ 95 (290)
.-+.+++||.|...++++. +++|.+|+..... .+.++..+..+ ..+|.+.+++-.+- +
T Consensus 374 ~dVRsl~vS~d~~~~~Sga--~~SikiWn~~t~k---ciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~E 448 (888)
T KOG0306|consen 374 SDVRSLCVSSDSILLASGA--GESIKIWNRDTLK---CIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVE 448 (888)
T ss_pred hheeEEEeecCceeeeecC--CCcEEEEEccCcc---eeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhh
Confidence 4588999998888777655 3689999998733 23222221111 12344555543221 1
Q ss_pred C-CCCcceeeccccCCCceEEEEccCCCEEEEEcCCC--CCcceeecccccCCCceeecceeeeeeecccccccCccccC
Q psy11412 96 K-QPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLF--SPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLG 172 (290)
Q Consensus 96 ~-~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~--~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~ 172 (290)
+ ..|. +....|+.+||++.+..++... .-||...... ..|..-. +....+.++
T Consensus 449 ti~AHd---------gaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~--~~gt~~k---~lsl~~~rt---------- 504 (888)
T KOG0306|consen 449 TIRAHD---------GAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVS--VPGTQKK---VLSLKHTRT---------- 504 (888)
T ss_pred hhhccc---------cceeeeeecCCCCceEEecCCcEEEEEeEEEEec--cCcccce---eeeeccceE----------
Confidence 1 1221 3567799999999888765411 1121110000 0010000 000000000
Q ss_pred ccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEee-CceecCCCceEEecCCCCCCCCCcceee
Q psy11412 173 SWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFL-GGKIQSDSGVTVIDDPELDKQPDPVIIK 251 (290)
Q Consensus 173 ~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~-Gg~~~~~~~v~~~~~~~~~~~~~~~~~~ 251 (290)
+.-......+.+|||||+|.++- .+++|.||-+++ .+. .++. |.++
T Consensus 505 ---Lel~ddvL~v~~Spdgk~LaVsL-LdnTVkVyflDt---lKF--flsLYGHkL------------------------ 551 (888)
T KOG0306|consen 505 ---LELEDDVLCVSVSPDGKLLAVSL-LDNTVKVYFLDT---LKF--FLSLYGHKL------------------------ 551 (888)
T ss_pred ---EeccccEEEEEEcCCCcEEEEEe-ccCeEEEEEecc---eee--eeeeccccc------------------------
Confidence 11124567799999999999999 899999999853 332 1111 2211
Q ss_pred cccccCCcceEEEccCCCEEEEEcC--CCCCCCccc
Q psy11412 252 GRRFTGSSQMFQLSLDGKRIYVSSS--LFSPWDKEI 285 (290)
Q Consensus 252 ~~~~~~~P~~~a~sPDG~~L~Van~--~~~~~~~~~ 285 (290)
-+..|.+|||++.+..+++ ..+-|.-.|
T Consensus 552 ------PV~smDIS~DSklivTgSADKnVKiWGLdF 581 (888)
T KOG0306|consen 552 ------PVLSMDISPDSKLIVTGSADKNVKIWGLDF 581 (888)
T ss_pred ------ceeEEeccCCcCeEEeccCCCceEEecccc
Confidence 1588999999999998876 667776554
No 124
>KOG0640|consensus
Probab=97.83 E-value=0.00056 Score=62.83 Aligned_cols=198 Identities=15% Similarity=0.179 Sum_probs=106.9
Q ss_pred ceE-EEEEcCCCCEEEEEeCCCCeEEEEEcCC-CCCceeeeEEeecccccCCCceEEecCCCCcCCCCccee--eccccC
Q psy11412 34 MVT-DILISLDDRYLYTSNWMHGDIRQYDIRD-TAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVII--KGRRFT 109 (290)
Q Consensus 34 ~p~-~va~SpDGr~Lyva~~~~g~V~v~dv~d-~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~~g 109 (290)
.|+ ..+|||||..+++.. .+-+|.++|++. .+.- ...++-.|+. -+.+|+++ .++ .
T Consensus 113 ~~cR~aafs~DG~lvATGs-aD~SIKildvermlaks-~~~em~~~~~----------------qa~hPvIRTlYDH--~ 172 (430)
T KOG0640|consen 113 SPCRAAAFSPDGSLVATGS-ADASIKILDVERMLAKS-KPKEMISGDT----------------QARHPVIRTLYDH--V 172 (430)
T ss_pred cceeeeeeCCCCcEEEccC-CcceEEEeehhhhhhhc-chhhhccCCc----------------ccCCceEeehhhc--c
Confidence 444 577999999887654 577999999852 0000 0111111110 01112211 111 1
Q ss_pred CCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEcc
Q psy11412 110 GSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISL 189 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~Sp 189 (290)
.....+.|||....|...+. ++.+..+|......++-.+. +.+...+..|.|+|
T Consensus 173 devn~l~FHPre~ILiS~sr----------------D~tvKlFDfsK~saKrA~K~----------~qd~~~vrsiSfHP 226 (430)
T KOG0640|consen 173 DEVNDLDFHPRETILISGSR----------------DNTVKLFDFSKTSAKRAFKV----------FQDTEPVRSISFHP 226 (430)
T ss_pred CcccceeecchhheEEeccC----------------CCeEEEEecccHHHHHHHHH----------hhccceeeeEeecC
Confidence 35667999999998886543 22333233222111111111 11123467899999
Q ss_pred CCCEEEEEeCCCCcEEEEEecC--------CCCce--EeeEE--eeCcee----cCCCceEEecCCCCCCCCCcceeecc
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRD--------TAHPV--LVGQI--FLGGKI----QSDSGVTVIDDPELDKQPDPVIIKGR 253 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d--------~~~~~--~v~~i--~~Gg~~----~~~~~v~~~~~~~~~~~~~~~~~~~~ 253 (290)
-|.||.++. .+..+++|||.. |.... .|..+ +..+++ +.||.+++||.--.. -...+...
T Consensus 227 sGefllvgT-dHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~r---Cv~t~~~A 302 (430)
T KOG0640|consen 227 SGEFLLVGT-DHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNR---CVRTIGNA 302 (430)
T ss_pred CCceEEEec-CCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHH---HHHHHHhh
Confidence 999999998 789999999953 11111 11111 111222 677888888743211 00011222
Q ss_pred cccCCcceEEEccCCCEEEEEcC--CCCCC
Q psy11412 254 RFTGSSQMFQLSLDGKRIYVSSS--LFSPW 281 (290)
Q Consensus 254 ~~~~~P~~~a~sPDG~~L~Van~--~~~~~ 281 (290)
+-|+..-+..|+.+||+++.+.. +.+-|
T Consensus 303 H~gsevcSa~Ftkn~kyiLsSG~DS~vkLW 332 (430)
T KOG0640|consen 303 HGGSEVCSAVFTKNGKYILSSGKDSTVKLW 332 (430)
T ss_pred cCCceeeeEEEccCCeEEeecCCcceeeee
Confidence 33445788999999999998754 44444
No 125
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.81 E-value=0.00017 Score=67.46 Aligned_cols=89 Identities=22% Similarity=0.327 Sum_probs=56.3
Q ss_pred eEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCC---------CCeEEEEEcCCCCCceeeeEEeecccc
Q psy11412 10 KADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWM---------HGDIRQYDIRDTAHPVLVGQIFLGGKI 80 (290)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~---------~g~V~v~dv~d~~~~~~~~~i~~g~~~ 80 (290)
.+.-|+|-.++++.+.+ ..+ +-.++++||||+++|+++.. .+.|.+||..+ +....+|.+...
T Consensus 17 ~rv~viD~d~~k~lGmi---~~g-~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~T---L~~~~EI~iP~k- 88 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMI---DTG-FLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQT---LSPTGEIEIPPK- 88 (342)
T ss_dssp EEEEEEETTTTEEEEEE---EEE-SSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTT---TEEEEEEEETTS-
T ss_pred ceEEEEECCCCcEEEEe---ecc-cCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCc---CcccceEecCCc-
Confidence 35667888888876654 333 34457899999999987432 35699999754 666666655310
Q ss_pred cCCCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcC
Q psy11412 81 QSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 81 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~ne 129 (290)
.+. -.+..++.+++|.|||++||-|-
T Consensus 89 ---~R~--------------------~~~~~~~~~~ls~dgk~~~V~N~ 114 (342)
T PF06433_consen 89 ---PRA--------------------QVVPYKNMFALSADGKFLYVQNF 114 (342)
T ss_dssp ----B----------------------BS--GGGEEE-TTSSEEEEEEE
T ss_pred ---chh--------------------eecccccceEEccCCcEEEEEcc
Confidence 000 01246778999999999999875
No 126
>KOG0278|consensus
Probab=97.80 E-value=0.00027 Score=63.17 Aligned_cols=130 Identities=16% Similarity=0.107 Sum_probs=79.4
Q ss_pred EEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCC
Q psy11412 13 KVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDP 92 (290)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~ 92 (290)
+.-|+..++.+.++ ..+..+.++-+|+||++|-.+ + +++|..||... ..++....+.
T Consensus 168 RLWD~rTgt~v~sL---~~~s~VtSlEvs~dG~ilTia-~-gssV~Fwdaks---f~~lKs~k~P--------------- 224 (334)
T KOG0278|consen 168 RLWDHRTGTEVQSL---EFNSPVTSLEVSQDGRILTIA-Y-GSSVKFWDAKS---FGLLKSYKMP--------------- 224 (334)
T ss_pred EEEEeccCcEEEEE---ecCCCCcceeeccCCCEEEEe-c-CceeEEecccc---ccceeeccCc---------------
Confidence 44566677766666 667788899999999998655 3 46899998754 3344433221
Q ss_pred CCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccC
Q psy11412 93 ELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLG 172 (290)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~ 172 (290)
.....-.++|+...+.+.+|+ . .+...|-.+ ...+... ..
T Consensus 225 -----------------~nV~SASL~P~k~~fVaGged-----~-----------~~~kfDy~T---geEi~~~----nk 264 (334)
T KOG0278|consen 225 -----------------CNVESASLHPKKEFFVAGGED-----F-----------KVYKFDYNT---GEEIGSY----NK 264 (334)
T ss_pred -----------------cccccccccCCCceEEecCcc-----e-----------EEEEEeccC---Cceeeec----cc
Confidence 344556789998544444441 1 111111110 1111100 00
Q ss_pred ccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 173 SWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 173 ~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
+ ..+.+..+.|||||. ||++.-.+++|++|...
T Consensus 265 g----h~gpVhcVrFSPdGE-~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 265 G----HFGPVHCVRFSPDGE-LYASGSEDGTIRLWQTT 297 (334)
T ss_pred C----CCCceEEEEECCCCc-eeeccCCCceEEEEEec
Confidence 1 224567799999996 69998889999999884
No 127
>KOG2394|consensus
Probab=97.77 E-value=0.00045 Score=67.25 Aligned_cols=146 Identities=19% Similarity=0.184 Sum_probs=76.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCC---CceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTA---HPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 110 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~---~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 110 (290)
.+..+..-|.+..++++...+|.+.+||..-.. .+.- .-++.+.. +-+.....-....|.+..... .+
T Consensus 221 svT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~-~~~k~~~~-------f~i~t~ksk~~rNPv~~w~~~-~g 291 (636)
T KOG2394|consen 221 SVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSY-QALKDGDQ-------FAILTSKSKKTRNPVARWHIG-EG 291 (636)
T ss_pred ceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcc-cccCCCCe-------eEEeeeeccccCCccceeEec-cc
Confidence 566677667777777676678999999864211 1110 00011100 001000000011222211111 14
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
.+..++|||||++|+++++ || .+-++ +|.....+.....- + ++-.-+..|||
T Consensus 292 ~in~f~FS~DG~~LA~VSq---------------DG-fLRvF---~fdt~eLlg~mkSY-F--------GGLLCvcWSPD 343 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQ---------------DG-FLRIF---DFDTQELLGVMKSY-F--------GGLLCVCWSPD 343 (636)
T ss_pred cccceeEcCCCceEEEEec---------------Cc-eEEEe---eccHHHHHHHHHhh-c--------cceEEEEEcCC
Confidence 7889999999999999987 23 33222 22111111100000 0 12334889999
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCceEeeE
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQ 220 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~ 220 (290)
||++.+.. .|+-|.||.+.+ .+++++
T Consensus 344 GKyIvtGG-EDDLVtVwSf~e---rRVVAR 369 (636)
T KOG2394|consen 344 GKYIVTGG-EDDLVTVWSFEE---RRVVAR 369 (636)
T ss_pred ccEEEecC-CcceEEEEEecc---ceEEEe
Confidence 99998888 688999999964 455553
No 128
>KOG0275|consensus
Probab=97.76 E-value=0.00012 Score=67.44 Aligned_cols=176 Identities=16% Similarity=0.178 Sum_probs=105.4
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
...+..+.||.|...|++.. .+|.|.+|.+..+ ..+....-.+ ..|
T Consensus 263 d~aVlci~FSRDsEMlAsGs-qDGkIKvWri~tG---~ClRrFdrAH------------------------------tkG 308 (508)
T KOG0275|consen 263 DDAVLCISFSRDSEMLASGS-QDGKIKVWRIETG---QCLRRFDRAH------------------------------TKG 308 (508)
T ss_pred ccceEEEeecccHHHhhccC-cCCcEEEEEEecc---hHHHHhhhhh------------------------------ccC
Confidence 44677899999999997554 5899999999763 2322211110 157
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDD 191 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDG 191 (290)
...+.||.|+..+..++- |. ++ .+.-. ...+.+. ++.| ......+..|++||
T Consensus 309 vt~l~FSrD~SqiLS~sf-----D~-----------tv-RiHGl--KSGK~LK-----EfrG----HsSyvn~a~ft~dG 360 (508)
T KOG0275|consen 309 VTCLSFSRDNSQILSASF-----DQ-----------TV-RIHGL--KSGKCLK-----EFRG----HSSYVNEATFTDDG 360 (508)
T ss_pred eeEEEEccCcchhhcccc-----cc-----------eE-EEecc--ccchhHH-----HhcC----ccccccceEEcCCC
Confidence 888999999987765432 10 10 01000 0011111 1111 12467789999999
Q ss_pred CEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCce----------------e---cCCCceEEecCCCCCCCCCcceeec
Q psy11412 192 RYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGK----------------I---QSDSGVTVIDDPELDKQPDPVIIKG 252 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~----------------~---~~~~~v~~~~~~~~~~~~~~~~~~~ 252 (290)
.++..+. .+++|.||+....+ -+.+...++. + .+.++|.++...+.-+. ..-.|
T Consensus 361 ~~iisaS-sDgtvkvW~~Ktte---C~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVr---sfsSG 433 (508)
T KOG0275|consen 361 HHIISAS-SDGTVKVWHGKTTE---CLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVR---SFSSG 433 (508)
T ss_pred CeEEEec-CCccEEEecCcchh---hhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEe---eeccC
Confidence 9988776 79999999874321 1111111111 0 56677777776553221 12244
Q ss_pred ccccCCcceEEEccCCCEEEEEcC
Q psy11412 253 RRFTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 253 ~~~~~~P~~~a~sPDG~~L~Van~ 276 (290)
.|-+|.=-...+||.|.|+|+..+
T Consensus 434 kREgGdFi~~~lSpkGewiYcigE 457 (508)
T KOG0275|consen 434 KREGGDFINAILSPKGEWIYCIGE 457 (508)
T ss_pred CccCCceEEEEecCCCcEEEEEcc
Confidence 454555567889999999999866
No 129
>KOG0273|consensus
Probab=97.74 E-value=0.00071 Score=64.93 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=46.3
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
..+++++||||||+|...+ .++.|.+|++.. .+++...--+ ++.
T Consensus 453 ~pVysvafS~~g~ylAsGs-~dg~V~iws~~~---~~l~~s~~~~--------------------------------~~I 496 (524)
T KOG0273|consen 453 EPVYSVAFSPNGRYLASGS-LDGCVHIWSTKT---GKLVKSYQGT--------------------------------GGI 496 (524)
T ss_pred CceEEEEecCCCcEEEecC-CCCeeEeccccc---hheeEeecCC--------------------------------CeE
Confidence 4589999999999998888 688999998742 3344432111 257
Q ss_pred ceEEEccCCCEEEEEcCC
Q psy11412 260 QMFQLSLDGKRIYVSSSL 277 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~~ 277 (290)
..+.++-+|..|.++-+.
T Consensus 497 fel~Wn~~G~kl~~~~sd 514 (524)
T KOG0273|consen 497 FELCWNAAGDKLGACASD 514 (524)
T ss_pred EEEEEcCCCCEEEEEecC
Confidence 889999999998887553
No 130
>KOG0267|consensus
Probab=97.74 E-value=0.0001 Score=73.66 Aligned_cols=174 Identities=18% Similarity=0.216 Sum_probs=98.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
...+|.|+++.+.|+. +..+|+|.+||++.+ +.+..+ +|+. ..+-
T Consensus 72 pIeSl~f~~~E~Llaa-gsasgtiK~wDleeA---k~vrtL-tgh~------------------------------~~~~ 116 (825)
T KOG0267|consen 72 PIESLTFDTSERLLAA-GSASGTIKVWDLEEA---KIVRTL-TGHL------------------------------LNIT 116 (825)
T ss_pred cceeeecCcchhhhcc-cccCCceeeeehhhh---hhhhhh-hccc------------------------------cCcc
Confidence 3457999999888764 456899999999752 222111 2211 2344
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.+.|||-|.+.. ...+ ++ .+.+||... .+.... ..+ ......-++|+||||+
T Consensus 117 sv~f~P~~~~~a-~gSt--------------dt-d~~iwD~Rk---~Gc~~~-----~~s----~~~vv~~l~lsP~Gr~ 168 (825)
T KOG0267|consen 117 SVDFHPYGEFFA-SGST--------------DT-DLKIWDIRK---KGCSHT-----YKS----HTRVVDVLRLSPDGRW 168 (825)
T ss_pred eeeeccceEEec-cccc--------------cc-cceehhhhc---cCceee-----ecC----CcceeEEEeecCCCce
Confidence 588999998652 1111 11 122333311 000100 000 1123445799999999
Q ss_pred EEEEeCCCCcEEEEEecCCCCceEeeEEe--------e-Cce-------ecCCCceEEecCCCCCCCCCcceeecccccC
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAHPVLVGQIF--------L-GGK-------IQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 257 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~--------~-Gg~-------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 257 (290)
+...+ .+++|.+||... .+++.+++ . ++. -+.|.+|.+||..+-. ..-.+-....
T Consensus 169 v~~g~-ed~tvki~d~~a---gk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe-----~I~s~~~~~~ 239 (825)
T KOG0267|consen 169 VASGG-EDNTVKIWDLTA---GKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFE-----VISSGKPETD 239 (825)
T ss_pred eeccC-Ccceeeeecccc---cccccccccccccccccccCchhhhhccCCCCceeeeeccceeE-----EeeccCCccC
Confidence 87776 479999999842 22222221 0 100 0467789999876411 1111222235
Q ss_pred CcceEEEccCCCEEEEEcC-CCC
Q psy11412 258 SSQMFQLSLDGKRIYVSSS-LFS 279 (290)
Q Consensus 258 ~P~~~a~sPDG~~L~Van~-~~~ 279 (290)
+++..+|+|||+.++...+ .++
T Consensus 240 ~v~~~~fn~~~~~~~~G~q~sl~ 262 (825)
T KOG0267|consen 240 GVRSLAFNPDGKIVLSGEQISLS 262 (825)
T ss_pred CceeeeecCCceeeecCchhhhh
Confidence 7999999999999998766 444
No 131
>KOG0302|consensus
Probab=97.66 E-value=0.00059 Score=63.97 Aligned_cols=120 Identities=15% Similarity=0.195 Sum_probs=75.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
++..+..||..+.++.+|.-+|+|++||++..-.-..+.. +.. ++-+.
T Consensus 259 SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh-------------------------------~sDVN 306 (440)
T KOG0302|consen 259 SVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAH-------------------------------NSDVN 306 (440)
T ss_pred chhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-ecc-------------------------------CCcee
Confidence 5678999999999999999999999999975311111111 111 14566
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
-|.++.+-..|+ +.. +.+.+.++|+..+...+++++... .....+.|.++|....
T Consensus 307 VISWnr~~~lLa-sG~---------------DdGt~~iwDLR~~~~~~pVA~fk~---------Hk~pItsieW~p~e~s 361 (440)
T KOG0302|consen 307 VISWNRREPLLA-SGG---------------DDGTLSIWDLRQFKSGQPVATFKY---------HKAPITSIEWHPHEDS 361 (440)
T ss_pred eEEccCCcceee-ecC---------------CCceEEEEEhhhccCCCcceeEEe---------ccCCeeEEEeccccCc
Confidence 677887777333 222 344666666655433333332110 1134678999996555
Q ss_pred EEEEeCCCCcEEEEEec
Q psy11412 194 LYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~ 210 (290)
.+++.-.+++|.+||++
T Consensus 362 ~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 362 VIAASGEDNQITIWDLS 378 (440)
T ss_pred eEEeccCCCcEEEEEee
Confidence 44444379999999996
No 132
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.63 E-value=0.0019 Score=58.90 Aligned_cols=133 Identities=17% Similarity=0.198 Sum_probs=71.7
Q ss_pred CCCceeEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCC-EEEEEeCCCCe-EEEEEcCCCCCceeeeEEeecccccC
Q psy11412 5 SDGTYKADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDR-YLYTSNWMHGD-IRQYDIRDTAHPVLVGQIFLGGKIQS 82 (290)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr-~Lyva~~~~g~-V~v~dv~d~~~~~~~~~i~~g~~~~~ 82 (290)
.||.|.+ ++-.+++|++..+ .|++.-|+|+++|--+ .++.+-. -|+ -.+||..+...+..+....
T Consensus 45 ~dgs~g~--a~~~eaGk~v~~~---~lpaR~Hgi~~~p~~~ravafARr-PGtf~~vfD~~~~~~pv~~~s~~------- 111 (366)
T COG3490 45 RDGSFGA--ATLSEAGKIVFAT---ALPARGHGIAFHPALPRAVAFARR-PGTFAMVFDPNGAQEPVTLVSQE------- 111 (366)
T ss_pred cCCceeE--EEEccCCceeeee---ecccccCCeecCCCCcceEEEEec-CCceEEEECCCCCcCcEEEeccc-------
Confidence 3455544 3445677777766 7777778888888743 4444433 333 4556665443333322100
Q ss_pred CCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeeccc
Q psy11412 83 DSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNE 162 (290)
Q Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~ 162 (290)
++ ..=-|-+|||||++||.+... .| ..-+.+ -+-++. ..
T Consensus 112 ----------------------~R---HfyGHGvfs~dG~~LYATEnd---fd--------~~rGVi---GvYd~r--~~ 150 (366)
T COG3490 112 ----------------------GR---HFYGHGVFSPDGRLLYATEND---FD--------PNRGVI---GVYDAR--EG 150 (366)
T ss_pred ----------------------Cc---eeecccccCCCCcEEEeecCC---CC--------CCCceE---EEEecc--cc
Confidence 00 111246899999999976541 11 011233 333321 11
Q ss_pred ccccCccccCccccCC-CCceeEEEEccCCCEEEEEe
Q psy11412 163 MRSMPLSSLGSWKYPA-RSMVTDILISLDDRYLYTSN 198 (290)
Q Consensus 163 i~~~p~~~~~~~~~~~-~~~~~~i~~SpDGr~Lyvs~ 198 (290)
.+. +. .++. +-.|.++.+.+|||.|.++|
T Consensus 151 fqr-----vg--E~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 151 FQR-----VG--EFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred cce-----ec--ccccCCcCcceeEEecCCcEEEEeC
Confidence 110 11 1222 23688999999999999998
No 133
>KOG0275|consensus
Probab=97.61 E-value=0.0012 Score=60.88 Aligned_cols=120 Identities=10% Similarity=0.202 Sum_probs=72.9
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
.+++++.|++||.++.++. .+|+|.||+... .+.+.+.+..+.--+-.++.. . -..|
T Consensus 349 Syvn~a~ft~dG~~iisaS-sDgtvkvW~~Kt---teC~~Tfk~~~~d~~vnsv~~-----------------~--PKnp 405 (508)
T KOG0275|consen 349 SYVNEATFTDDGHHIISAS-SDGTVKVWHGKT---TECLSTFKPLGTDYPVNSVIL-----------------L--PKNP 405 (508)
T ss_pred ccccceEEcCCCCeEEEec-CCccEEEecCcc---hhhhhhccCCCCcccceeEEE-----------------c--CCCC
Confidence 3778899999999998776 589999999754 344444433321000001100 0 1457
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
.|+..-....++|+.|- .| . .+++...+..++ +... ...+||-|.
T Consensus 406 eh~iVCNrsntv~imn~---------------qG-Q-------------vVrsfsSGkREg-----GdFi-~~~lSpkGe 450 (508)
T KOG0275|consen 406 EHFIVCNRSNTVYIMNM---------------QG-Q-------------VVRSFSSGKREG-----GDFI-NAILSPKGE 450 (508)
T ss_pred ceEEEEcCCCeEEEEec---------------cc-e-------------EEeeeccCCccC-----CceE-EEEecCCCc
Confidence 78777777778888764 12 1 122222222222 2233 356999999
Q ss_pred EEEEEeCCCCcEEEEEecC
Q psy11412 193 YLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d 211 (290)
++|... .++.++.|.+..
T Consensus 451 wiYcig-ED~vlYCF~~~s 468 (508)
T KOG0275|consen 451 WIYCIG-EDGVLYCFSVLS 468 (508)
T ss_pred EEEEEc-cCcEEEEEEeec
Confidence 999998 678888888753
No 134
>KOG4378|consensus
Probab=97.60 E-value=0.0023 Score=61.98 Aligned_cols=176 Identities=17% Similarity=0.142 Sum_probs=113.3
Q ss_pred ecCCCceeEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccC
Q psy11412 3 RQSDGTYKADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQS 82 (290)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~ 82 (290)
--+.|+=+-.++-|+.++-+...+ .+.- ..+..+...-..-||+.... +|.|.+..+.....- ..+
T Consensus 94 ~~sgG~~~~Vkiwdl~~kl~hr~l-kdh~-stvt~v~YN~~DeyiAsvs~-gGdiiih~~~t~~~t---t~f-------- 159 (673)
T KOG4378|consen 94 EISGGQSGCVKIWDLRAKLIHRFL-KDHQ-STVTYVDYNNTDEYIASVSD-GGDIIIHGTKTKQKT---TTF-------- 159 (673)
T ss_pred eeccCcCceeeehhhHHHHHhhhc-cCCc-ceeEEEEecCCcceeEEecc-CCcEEEEecccCccc---cce--------
Confidence 335566667777788766665555 2222 46778888888888876654 677888877542211 111
Q ss_pred CCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeeccc
Q psy11412 83 DSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNE 162 (290)
Q Consensus 83 ~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~ 162 (290)
+...|...|++-|||..|+|.++.. +.+.+..||+.. ...
T Consensus 160 ----------------------~~~sgqsvRll~ys~skr~lL~~as---------------d~G~VtlwDv~g---~sp 199 (673)
T KOG4378|consen 160 ----------------------TIDSGQSVRLLRYSPSKRFLLSIAS---------------DKGAVTLWDVQG---MSP 199 (673)
T ss_pred ----------------------ecCCCCeEEEeecccccceeeEeec---------------cCCeEEEEeccC---CCc
Confidence 1112456799999999999998765 344566666643 111
Q ss_pred ccccCccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCC
Q psy11412 163 MRSMPLSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELD 242 (290)
Q Consensus 163 i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~ 242 (290)
+. .|.-......++|+|||-...|+|+.-.+-.|.+||+.. .+...++--
T Consensus 200 ~~--------~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s---~~s~~~l~y------------------- 249 (673)
T KOG4378|consen 200 IF--------HASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRS---QASTDRLTY------------------- 249 (673)
T ss_pred cc--------chhhhccCCcCcceecCCccceEEEecccceEEEeeccc---ccccceeee-------------------
Confidence 11 221111234678999999999999997889999999853 222222211
Q ss_pred CCCCcceeecccccCCc-ceEEEccCCCEEEEEcC
Q psy11412 243 KQPDPVIIKGRRFTGSS-QMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 243 ~~~~~~~~~~~~~~~~P-~~~a~sPDG~~L~Van~ 276 (290)
.+| ..++|+++|.+|.+.|.
T Consensus 250 --------------~~Plstvaf~~~G~~L~aG~s 270 (673)
T KOG4378|consen 250 --------------SHPLSTVAFSECGTYLCAGNS 270 (673)
T ss_pred --------------cCCcceeeecCCceEEEeecC
Confidence 134 56999999999999876
No 135
>KOG1539|consensus
Probab=97.59 E-value=0.00027 Score=71.77 Aligned_cols=80 Identities=19% Similarity=0.293 Sum_probs=59.3
Q ss_pred EEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCC
Q psy11412 13 KVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDP 92 (290)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~ 92 (290)
.|+|+-+.+|+... .-...-..+++||||||+|.+++. +++|++||+.. ..++..+.+.
T Consensus 559 ~vvD~~t~kvvR~f--~gh~nritd~~FS~DgrWlisasm-D~tIr~wDlpt---~~lID~~~vd--------------- 617 (910)
T KOG1539|consen 559 RVVDVVTRKVVREF--WGHGNRITDMTFSPDGRWLISASM-DSTIRTWDLPT---GTLIDGLLVD--------------- 617 (910)
T ss_pred EEEEchhhhhhHHh--hccccceeeeEeCCCCcEEEEeec-CCcEEEEeccC---cceeeeEecC---------------
Confidence 56777777766543 114557789999999999999986 78999999954 3455443332
Q ss_pred CCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCC
Q psy11412 93 ELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSL 130 (290)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel 130 (290)
..+-.+.|||+|.+|+++...
T Consensus 618 -----------------~~~~sls~SPngD~LAT~Hvd 638 (910)
T KOG1539|consen 618 -----------------SPCTSLSFSPNGDFLATVHVD 638 (910)
T ss_pred -----------------CcceeeEECCCCCEEEEEEec
Confidence 345669999999999998774
No 136
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.54 E-value=0.0051 Score=55.57 Aligned_cols=172 Identities=12% Similarity=0.068 Sum_probs=79.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCc-ee--eeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHP-VL--VGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 110 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~-~~--~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 110 (290)
-+.+|++.-+|+++.+. .-.+++.++++.+.+.. .. ...+.++-. .....
T Consensus 66 D~EgI~y~g~~~~vl~~-Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~--------------------------~~~N~ 118 (248)
T PF06977_consen 66 DYEGITYLGNGRYVLSE-ERDQRLYIFTIDDDTTSLDRADVQKISLGFP--------------------------NKGNK 118 (248)
T ss_dssp SEEEEEE-STTEEEEEE-TTTTEEEEEEE----TT--EEEEEEEE---S-----------------------------SS
T ss_pred CceeEEEECCCEEEEEE-cCCCcEEEEEEeccccccchhhceEEecccc--------------------------cCCCc
Confidence 68899998888777644 45789999999543221 11 222333210 01135
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
|-.+++++|.+++||++.|-... ..+...- ...+..+ ...+ ..... .. .+ .-..+++++++|.
T Consensus 119 G~EGla~D~~~~~L~v~kE~~P~-~l~~~~~-~~~~~~~---~~~~---~~~~~---~~---~~---~~~d~S~l~~~p~ 181 (248)
T PF06977_consen 119 GFEGLAYDPKTNRLFVAKERKPK-RLYEVNG-FPGGFDL---FVSD---DQDLD---DD---KL---FVRDLSGLSYDPR 181 (248)
T ss_dssp --EEEEEETTTTEEEEEEESSSE-EEEEEES-TT-SS-----EEEE----HHHH----H---T-----SS---EEEEETT
T ss_pred ceEEEEEcCCCCEEEEEeCCCCh-hhEEEcc-ccCccce---eecc---ccccc---cc---cc---eeccccceEEcCC
Confidence 78999999999999999873210 0000000 0000000 0000 00000 00 00 0135788999998
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCE
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKR 270 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~ 270 (290)
-..||+-.-.+..|..+|.. .+.+..++.-... .++ .+.. .+|.+|+|+++| .
T Consensus 182 t~~lliLS~es~~l~~~d~~----G~~~~~~~L~~g~-----------~gl--------~~~~---~QpEGIa~d~~G-~ 234 (248)
T PF06977_consen 182 TGHLLILSDESRLLLELDRQ----GRVVSSLSLDRGF-----------HGL--------SKDI---PQPEGIAFDPDG-N 234 (248)
T ss_dssp TTEEEEEETTTTEEEEE-TT------EEEEEE-STTG-----------GG---------SS------SEEEEEE-TT---
T ss_pred CCeEEEEECCCCeEEEECCC----CCEEEEEEeCCcc-----------cCc--------cccc---CCccEEEECCCC-C
Confidence 77777655467778777632 3444444332100 000 0001 169999999999 7
Q ss_pred EEEEcC
Q psy11412 271 IYVSSS 276 (290)
Q Consensus 271 L~Van~ 276 (290)
||++|+
T Consensus 235 LYIvsE 240 (248)
T PF06977_consen 235 LYIVSE 240 (248)
T ss_dssp EEEEET
T ss_pred EEEEcC
Confidence 888887
No 137
>KOG2106|consensus
Probab=97.52 E-value=0.0029 Score=61.40 Aligned_cols=31 Identities=16% Similarity=0.246 Sum_probs=26.8
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEecCC
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~ 212 (290)
..+-+++||||.+|+++. -++.|++|.|+.-
T Consensus 449 ~ls~v~ysp~G~~lAvgs-~d~~iyiy~Vs~~ 479 (626)
T KOG2106|consen 449 QLSVVRYSPDGAFLAVGS-HDNHIYIYRVSAN 479 (626)
T ss_pred ceEEEEEcCCCCEEEEec-CCCeEEEEEECCC
Confidence 456699999999999998 6899999999753
No 138
>KOG0316|consensus
Probab=97.52 E-value=0.0057 Score=54.46 Aligned_cols=174 Identities=17% Similarity=0.172 Sum_probs=101.0
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
-+.+..+-+.-||.|..+++ .+.+|++|+.- +..++.+...+ |..
T Consensus 17 qgaV~avryN~dGnY~ltcG-sdrtvrLWNp~---rg~liktYsgh-------------------------------G~E 61 (307)
T KOG0316|consen 17 QGAVRAVRYNVDGNYCLTCG-SDRTVRLWNPL---RGALIKTYSGH-------------------------------GHE 61 (307)
T ss_pred ccceEEEEEccCCCEEEEcC-CCceEEeeccc---ccceeeeecCC-------------------------------Cce
Confidence 34577889999999998665 58899999853 34455433221 234
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDD 191 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDG 191 (290)
...++.+-|...+..... +..+..||+. +.+.++. ..+ .......|+|..+.
T Consensus 62 VlD~~~s~Dnskf~s~Gg----------------Dk~v~vwDV~---TGkv~Rr-----~rg----H~aqVNtV~fNees 113 (307)
T KOG0316|consen 62 VLDAALSSDNSKFASCGG----------------DKAVQVWDVN---TGKVDRR-----FRG----HLAQVNTVRFNEES 113 (307)
T ss_pred eeeccccccccccccCCC----------------CceEEEEEcc---cCeeeee-----ccc----ccceeeEEEecCcc
Confidence 556677777665554322 1233334433 2333331 111 22567789999998
Q ss_pred CEEEEEeCCCCcEEEEEecCC-CCceE--------eeEEeeCc-ee---cCCCceEEecCCCCCCCCCcceeecccccCC
Q psy11412 192 RYLYTSNWMHGDIRQYDIRDT-AHPVL--------VGQIFLGG-KI---QSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 258 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d~-~~~~~--------v~~i~~Gg-~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (290)
..++.+. .+.++.+||...- ..|.. +-.|.+.+ .+ +-|++|+.+|...-...++ -+|.-
T Consensus 114 SVv~Sgs-fD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sD-------y~g~p 185 (307)
T KOG0316|consen 114 SVVASGS-FDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSD-------YFGHP 185 (307)
T ss_pred eEEEecc-ccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeehh-------hcCCc
Confidence 8876666 7889999998431 11211 11111111 11 5788899988543111111 11222
Q ss_pred cceEEEccCCCEEEEEcC
Q psy11412 259 SQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 259 P~~~a~sPDG~~L~Van~ 276 (290)
...+.||+||..+++.+-
T Consensus 186 it~vs~s~d~nc~La~~l 203 (307)
T KOG0316|consen 186 ITSVSFSKDGNCSLASSL 203 (307)
T ss_pred ceeEEecCCCCEEEEeec
Confidence 488999999999998743
No 139
>KOG0273|consensus
Probab=97.52 E-value=0.0059 Score=58.79 Aligned_cols=91 Identities=14% Similarity=0.107 Sum_probs=58.4
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCC-------CceEeeE---EeeCce------------ecCCCceEEec
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTA-------HPVLVGQ---IFLGGK------------IQSDSGVTVID 237 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~-------~~~~v~~---i~~Gg~------------~~~~~~v~~~~ 237 (290)
+....|.+.|.|..|..+. .++++.+|...+.. +.+.|-+ .|+|.- .+.|++|++||
T Consensus 360 g~V~alk~n~tg~LLaS~S-dD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwd 438 (524)
T KOG0273|consen 360 GEVNALKWNPTGSLLASCS-DDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWD 438 (524)
T ss_pred CceEEEEECCCCceEEEec-CCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEE
Confidence 5678899999999998776 89999999975421 1112222 233311 26788899998
Q ss_pred CCCCCCCCCcceeecccccCCcceEEEccCCCEEEEEcC
Q psy11412 238 DPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~ 276 (290)
.... .|.- .+... +.-+.+++|||+|++|+..+-
T Consensus 439 v~~g--v~i~-~f~kH--~~pVysvafS~~g~ylAsGs~ 472 (524)
T KOG0273|consen 439 VESG--VPIH-TLMKH--QEPVYSVAFSPNGRYLASGSL 472 (524)
T ss_pred ccCC--ceeE-eeccC--CCceEEEEecCCCcEEEecCC
Confidence 6541 1110 01011 113689999999999998865
No 140
>KOG0319|consensus
Probab=97.51 E-value=0.0017 Score=65.25 Aligned_cols=136 Identities=16% Similarity=0.129 Sum_probs=81.9
Q ss_pred eEEEEEecCCCccCCCCCCCCC--CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceE
Q psy11412 10 KADKVIDIPAKQVQGYPGGDKV--PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVT 87 (290)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~v--~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~ 87 (290)
+.-++..++.++++..- ++ .+-+.-++|+|.|..|+ +...+|.|.|||+.. .-.+..+..
T Consensus 84 ~llrv~~L~tgk~irsw---Ka~He~Pvi~ma~~~~g~LlA-tggaD~~v~VWdi~~---~~~th~fkG----------- 145 (775)
T KOG0319|consen 84 QLLRVWSLPTGKLIRSW---KAIHEAPVITMAFDPTGTLLA-TGGADGRVKVWDIKN---GYCTHSFKG----------- 145 (775)
T ss_pred ceEEEEEcccchHhHhH---hhccCCCeEEEEEcCCCceEE-eccccceEEEEEeeC---CEEEEEecC-----------
Confidence 34566777777666554 44 23445789999995555 445689999999965 223322111
Q ss_pred EecCCCCcCCCCcceeeccccCCCceEEEEccCCCEE-EEEcCCCCCcceeecccccCCCceeecceeeeeeeccccccc
Q psy11412 88 VIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRI-YVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSM 166 (290)
Q Consensus 88 v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~l-Yv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~ 166 (290)
. |+-...+.|+|+-.+. ..+.+ +++.+..|+..+-.. .+..
T Consensus 146 ------------------~--gGvVssl~F~~~~~~~lL~sg~---------------~D~~v~vwnl~~~~t--cl~~- 187 (775)
T KOG0319|consen 146 ------------------H--GGVVSSLLFHPHWNRWLLASGA---------------TDGTVRVWNLNDKRT--CLHT- 187 (775)
T ss_pred ------------------C--CceEEEEEeCCccchhheeecC---------------CCceEEEEEcccCch--HHHH-
Confidence 0 1345668899997652 22222 233444455543110 0110
Q ss_pred CccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 167 PLSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 167 p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
| ...-+...+++|++|+..+...+| +..+.+||..
T Consensus 188 -------~-~~H~S~vtsL~~~~d~~~~ls~~R-Dkvi~vwd~~ 222 (775)
T KOG0319|consen 188 -------M-ILHKSAVTSLAFSEDSLELLSVGR-DKVIIVWDLV 222 (775)
T ss_pred -------H-HhhhhheeeeeeccCCceEEEecc-CcEEEEeehh
Confidence 0 011246788999999999998886 6689999984
No 141
>KOG0296|consensus
Probab=97.50 E-value=0.0037 Score=58.41 Aligned_cols=116 Identities=14% Similarity=0.157 Sum_probs=72.4
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCC
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 110 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 110 (290)
=.+.+..++++|+.+ |++++.+++.-.+|++.+.. .+.++ +|+ ..
T Consensus 63 H~~svFavsl~P~~~-l~aTGGgDD~AflW~~~~ge---~~~el-tgH------------------------------KD 107 (399)
T KOG0296|consen 63 HTDSVFAVSLHPNNN-LVATGGGDDLAFLWDISTGE---FAGEL-TGH------------------------------KD 107 (399)
T ss_pred cCCceEEEEeCCCCc-eEEecCCCceEEEEEccCCc---ceeEe-cCC------------------------------CC
Confidence 355788999999555 55666779999999997632 22221 221 14
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccC-CCCceeEEEEcc
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYP-ARSMVTDILISL 189 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~-~~~~~~~i~~Sp 189 (290)
.+..+.||-||.+|+. ..|++.+-+ +.+.. ... -|.+- +.....-+..+|
T Consensus 108 SVt~~~FshdgtlLAT-GdmsG~v~v---------------~~~st---g~~----------~~~~~~e~~dieWl~WHp 158 (399)
T KOG0296|consen 108 SVTCCSFSHDGTLLAT-GDMSGKVLV---------------FKVST---GGE----------QWKLDQEVEDIEWLKWHP 158 (399)
T ss_pred ceEEEEEccCceEEEe-cCCCccEEE---------------EEccc---Cce----------EEEeecccCceEEEEecc
Confidence 5677999999997774 334332211 22111 000 11111 112344588999
Q ss_pred CCCEEEEEeCCCCcEEEEEecC
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
-+++|.+.. .+++|..|.|..
T Consensus 159 ~a~illAG~-~DGsvWmw~ip~ 179 (399)
T KOG0296|consen 159 RAHILLAGS-TDGSVWMWQIPS 179 (399)
T ss_pred cccEEEeec-CCCcEEEEECCC
Confidence 999999888 799999999854
No 142
>KOG1273|consensus
Probab=97.48 E-value=0.005 Score=56.82 Aligned_cols=116 Identities=16% Similarity=0.203 Sum_probs=71.5
Q ss_pred eEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceE
Q psy11412 35 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQM 114 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~ 114 (290)
+++++.|+|||.|.++.. +..|.+||+.++. .+.++... +....
T Consensus 68 i~sl~WS~dgr~LltsS~-D~si~lwDl~~gs---~l~rirf~--------------------------------spv~~ 111 (405)
T KOG1273|consen 68 ITSLCWSRDGRKLLTSSR-DWSIKLWDLLKGS---PLKRIRFD--------------------------------SPVWG 111 (405)
T ss_pred eeEEEecCCCCEeeeecC-CceeEEEeccCCC---ceeEEEcc--------------------------------Cccce
Confidence 458999999999998875 8899999997743 33333231 34556
Q ss_pred EEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCEE
Q psy11412 115 FQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYL 194 (290)
Q Consensus 115 vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~L 194 (290)
..|||..+..+|+..+.. ...+ ++..+. ...+. |... .+ . ....+....|.+-|+++
T Consensus 112 ~q~hp~k~n~~va~~~~~-------------sp~v--i~~s~~--~h~~L--p~d~-d~-d--ln~sas~~~fdr~g~yI 168 (405)
T KOG1273|consen 112 AQWHPRKRNKCVATIMEE-------------SPVV--IDFSDP--KHSVL--PKDD-DG-D--LNSSASHGVFDRRGKYI 168 (405)
T ss_pred eeeccccCCeEEEEEecC-------------CcEE--EEecCC--ceeec--cCCC-cc-c--cccccccccccCCCCEE
Confidence 778998888888765321 1111 122110 00111 1000 00 0 01134445799999999
Q ss_pred EEEeCCCCcEEEEEec
Q psy11412 195 YTSNWMHGDIRQYDIR 210 (290)
Q Consensus 195 yvs~r~~~~V~v~Dv~ 210 (290)
|+.+ ..|.+.|+|..
T Consensus 169 itGt-sKGkllv~~a~ 183 (405)
T KOG1273|consen 169 ITGT-SKGKLLVYDAE 183 (405)
T ss_pred EEec-CcceEEEEecc
Confidence 9999 88999999864
No 143
>KOG0306|consensus
Probab=97.45 E-value=0.0044 Score=62.68 Aligned_cols=27 Identities=19% Similarity=0.330 Sum_probs=23.1
Q ss_pred eeEEEEccCCCEEEEEeCCCCcEEEEEe
Q psy11412 182 VTDILISLDDRYLYTSNWMHGDIRQYDI 209 (290)
Q Consensus 182 ~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv 209 (290)
.-.|+++||++...++. .+.+|.+||.
T Consensus 457 IWsi~~~pD~~g~vT~s-aDktVkfWdf 483 (888)
T KOG0306|consen 457 IWSISLSPDNKGFVTGS-ADKTVKFWDF 483 (888)
T ss_pred eeeeeecCCCCceEEec-CCcEEEEEeE
Confidence 34589999999987777 7999999997
No 144
>KOG0289|consensus
Probab=97.45 E-value=0.0042 Score=59.31 Aligned_cols=171 Identities=15% Similarity=0.182 Sum_probs=101.8
Q ss_pred EEEEEecCCCccCCCCCCCCCCC---ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceE
Q psy11412 11 ADKVIDIPAKQVQGYPGGDKVPA---MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVT 87 (290)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~v~~---~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~ 87 (290)
-.-+.|.++.++.... .+ ..+.+.++|+-+.+.++.. +-.|+||.+.....+..+.
T Consensus 242 ~av~~d~~s~q~l~~~-----~Gh~kki~~v~~~~~~~~v~~aSa-d~~i~vws~~~~s~~~~~~--------------- 300 (506)
T KOG0289|consen 242 TAVLFDKPSNQILATL-----KGHTKKITSVKFHKDLDTVITASA-DEIIRVWSVPLSSEPTSSR--------------- 300 (506)
T ss_pred ceEEEecchhhhhhhc-----cCcceEEEEEEeccchhheeecCC-cceEEeeccccccCccccc---------------
Confidence 3456677776655533 33 5678899999999987764 6689999886533222211
Q ss_pred EecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccC
Q psy11412 88 VIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMP 167 (290)
Q Consensus 88 v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p 167 (290)
++ ...++.+.+||.|.+|..++. ...|-...+ .+|..+..+...
T Consensus 301 ----------~h---------~~~V~~ls~h~tgeYllsAs~-d~~w~Fsd~----~~g~~lt~vs~~------------ 344 (506)
T KOG0289|consen 301 ----------PH---------EEPVTGLSLHPTGEYLLSASN-DGTWAFSDI----SSGSQLTVVSDE------------ 344 (506)
T ss_pred ----------cc---------cccceeeeeccCCcEEEEecC-CceEEEEEc----cCCcEEEEEeec------------
Confidence 11 135677999999998886653 233321111 122222111100
Q ss_pred ccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCc
Q psy11412 168 LSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDP 247 (290)
Q Consensus 168 ~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~ 247 (290)
. ..-....++|+|||-.+ ++.-.++.|.+||+..+. .+...+. .
T Consensus 345 -----~----s~v~~ts~~fHpDgLif-gtgt~d~~vkiwdlks~~---~~a~Fpg-h---------------------- 388 (506)
T KOG0289|consen 345 -----T----SDVEYTSAAFHPDGLIF-GTGTPDGVVKIWDLKSQT---NVAKFPG-H---------------------- 388 (506)
T ss_pred -----c----ccceeEEeeEcCCceEE-eccCCCceEEEEEcCCcc---ccccCCC-C----------------------
Confidence 0 01124568999999664 444478999999997532 2232221 1
Q ss_pred ceeecccccCCcceEEEccCCCEEEEEcC-C-CCCCC
Q psy11412 248 VIIKGRRFTGSSQMFQLSLDGKRIYVSSS-L-FSPWD 282 (290)
Q Consensus 248 ~~~~~~~~~~~P~~~a~sPDG~~L~Van~-~-~~~~~ 282 (290)
.+-...++|+-+|-||++++. . ..-||
T Consensus 389 --------t~~vk~i~FsENGY~Lat~add~~V~lwD 417 (506)
T KOG0289|consen 389 --------TGPVKAISFSENGYWLATAADDGSVKLWD 417 (506)
T ss_pred --------CCceeEEEeccCceEEEEEecCCeEEEEE
Confidence 013588999999999999976 2 44454
No 145
>KOG0285|consensus
Probab=97.45 E-value=0.0015 Score=61.05 Aligned_cols=132 Identities=14% Similarity=0.239 Sum_probs=86.7
Q ss_pred EEEEecCCCccCCCCCCCC-CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEec
Q psy11412 12 DKVIDIPAKQVQGYPGGDK-VPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVID 90 (290)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~-v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~ 90 (290)
-+++|++.++....+ + .-..+.++++|+---||+.+.. ++.|.+||++. .+++... .|+ +
T Consensus 175 ikIwDlatg~Lkltl---tGhi~~vr~vavS~rHpYlFs~ge-dk~VKCwDLe~---nkvIR~Y-hGH-------l---- 235 (460)
T KOG0285|consen 175 IKIWDLATGQLKLTL---TGHIETVRGVAVSKRHPYLFSAGE-DKQVKCWDLEY---NKVIRHY-HGH-------L---- 235 (460)
T ss_pred eEEEEcccCeEEEee---cchhheeeeeeecccCceEEEecC-CCeeEEEechh---hhhHHHh-ccc-------c----
Confidence 368899998877654 2 2236779999999999997765 88999999976 3444332 221 1
Q ss_pred CCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccc
Q psy11412 91 DPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSS 170 (290)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~ 170 (290)
+++..++++|.-+.|+..+. +.+. .+.|.+++..+..
T Consensus 236 -------------------S~V~~L~lhPTldvl~t~gr----------------Dst~---RvWDiRtr~~V~~----- 272 (460)
T KOG0285|consen 236 -------------------SGVYCLDLHPTLDVLVTGGR----------------DSTI---RVWDIRTRASVHV----- 272 (460)
T ss_pred -------------------ceeEEEeccccceeEEecCC----------------cceE---EEeeecccceEEE-----
Confidence 68899999999998887654 1122 2333222322221
Q ss_pred cCccccCCC-CceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 171 LGSWKYPAR-SMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 171 ~~~~~~~~~-~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
+++. +.++.+.+-|-.-.+|.+. .+.+|.+||+..
T Consensus 273 -----l~GH~~~V~~V~~~~~dpqvit~S-~D~tvrlWDl~a 308 (460)
T KOG0285|consen 273 -----LSGHTNPVASVMCQPTDPQVITGS-HDSTVRLWDLRA 308 (460)
T ss_pred -----ecCCCCcceeEEeecCCCceEEec-CCceEEEeeecc
Confidence 2222 4566777777444556666 789999999964
No 146
>KOG0265|consensus
Probab=97.44 E-value=0.014 Score=53.45 Aligned_cols=197 Identities=19% Similarity=0.154 Sum_probs=113.4
Q ss_pred CceeEEEEEecCCCccCCCCCCCCC-CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCc
Q psy11412 7 GTYKADKVIDIPAKQVQGYPGGDKV-PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSG 85 (290)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~v-~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~ 85 (290)
|+=+.-.+-|+..++.+..- +. ...+..+..+.-|-.|..+...++++++||++.....+....
T Consensus 109 gtDk~v~~wD~~tG~~~rk~---k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~------------ 173 (338)
T KOG0265|consen 109 GTDKTVRGWDAETGKRIRKH---KGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN------------ 173 (338)
T ss_pred cCCceEEEEecccceeeehh---ccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcccc------------
Confidence 55566677888877766544 33 335667777777889988888899999999975321111100
Q ss_pred eEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccc
Q psy11412 86 VTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRS 165 (290)
Q Consensus 86 ~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~ 165 (290)
.-....+.|..++........ | + .+.+|+... ....-
T Consensus 174 -----------------------kyqltAv~f~d~s~qv~sggI-----d----------n-~ikvWd~r~----~d~~~ 210 (338)
T KOG0265|consen 174 -----------------------KYQLTAVGFKDTSDQVISGGI-----D----------N-DIKVWDLRK----NDGLY 210 (338)
T ss_pred -----------------------ceeEEEEEecccccceeeccc-----c----------C-ceeeecccc----CcceE
Confidence 012344778888777765432 1 1 122232210 00000
Q ss_pred cCccccCccccCCC-CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCcee-----------------
Q psy11412 166 MPLSSLGSWKYPAR-SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKI----------------- 227 (290)
Q Consensus 166 ~p~~~~~~~~~~~~-~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~----------------- 227 (290)
.+.+. ....+|.+||+|.+|- ||-.+++|.+||+..-....+.-.|..|...
T Consensus 211 ---------~lsGh~DtIt~lsls~~gs~ll-snsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~ 280 (338)
T KOG0265|consen 211 ---------TLSGHADTITGLSLSRYGSFLL-SNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTK 280 (338)
T ss_pred ---------EeecccCceeeEEeccCCCccc-cccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCc
Confidence 11111 3577899999999975 6668999999999531111111112223221
Q ss_pred ----cCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEEEcC
Q psy11412 228 ----QSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 228 ----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~ 276 (290)
+.|..|.+||... ++..|+=..-.+..+.+.|.|.--.|..+..
T Consensus 281 i~ags~dr~vyvwd~~~-----r~~lyklpGh~gsvn~~~Fhp~e~iils~~s 328 (338)
T KOG0265|consen 281 ITAGSADRFVYVWDTTS-----RRILYKLPGHYGSVNEVDFHPTEPIILSCSS 328 (338)
T ss_pred cccccccceEEEeeccc-----ccEEEEcCCcceeEEEeeecCCCcEEEEecc
Confidence 4555688887543 1221111111235899999999998888765
No 147
>KOG0296|consensus
Probab=97.44 E-value=0.004 Score=58.25 Aligned_cols=114 Identities=15% Similarity=0.093 Sum_probs=73.6
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
.++..+.||-||.+|++.+. +|.|.||..+.......+. + .....
T Consensus 107 DSVt~~~FshdgtlLATGdm-sG~v~v~~~stg~~~~~~~----~------------------------------e~~di 151 (399)
T KOG0296|consen 107 DSVTCCSFSHDGTLLATGDM-SGKVLVFKVSTGGEQWKLD----Q------------------------------EVEDI 151 (399)
T ss_pred CceEEEEEccCceEEEecCC-CccEEEEEcccCceEEEee----c------------------------------ccCce
Confidence 37889999999999998876 8999999997633211111 0 01456
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCC-CceeEEEEccCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPAR-SMVTDILISLDD 191 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~~~~~i~~SpDG 191 (290)
..|..||-++.|...+...+.|- |.+-. ....+. ++++ ..+..=.|.|||
T Consensus 152 eWl~WHp~a~illAG~~DGsvWm----------------w~ip~---~~~~kv----------~~Gh~~~ct~G~f~pdG 202 (399)
T KOG0296|consen 152 EWLKWHPRAHILLAGSTDGSVWM----------------WQIPS---QALCKV----------MSGHNSPCTCGEFIPDG 202 (399)
T ss_pred EEEEecccccEEEeecCCCcEEE----------------EECCC---cceeeE----------ecCCCCCcccccccCCC
Confidence 77999999999988766434332 11110 000110 1111 122334699999
Q ss_pred CEEEEEeCCCCcEEEEEecC
Q psy11412 192 RYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d 211 (290)
|++.+.. .+++|.+|+...
T Consensus 203 Kr~~tgy-~dgti~~Wn~kt 221 (399)
T KOG0296|consen 203 KRILTGY-DDGTIIVWNPKT 221 (399)
T ss_pred ceEEEEe-cCceEEEEecCC
Confidence 9999887 699999998853
No 148
>KOG0299|consensus
Probab=97.43 E-value=0.0089 Score=57.35 Aligned_cols=63 Identities=22% Similarity=0.264 Sum_probs=46.0
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEecCCC-CceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTA-HPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~-~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
+..++++.|.-..+..+. .++.|.+|-+.+-. ...++..++.-| ..
T Consensus 382 Witsla~i~~sdL~asGS-~~G~vrLW~i~~g~r~i~~l~~ls~~G--------------------------------fV 428 (479)
T KOG0299|consen 382 WITSLAVIPGSDLLASGS-WSGCVRLWKIEDGLRAINLLYSLSLVG--------------------------------FV 428 (479)
T ss_pred ceeeeEecccCceEEecC-CCCceEEEEecCCccccceeeeccccc--------------------------------EE
Confidence 778899999766655444 78999999996521 233455554433 68
Q ss_pred ceEEEccCCCEEEEEcC
Q psy11412 260 QMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~ 276 (290)
+.++|+++|++|+|+..
T Consensus 429 Nsl~f~~sgk~ivagiG 445 (479)
T KOG0299|consen 429 NSLAFSNSGKRIVAGIG 445 (479)
T ss_pred EEEEEccCCCEEEEecc
Confidence 89999999999999854
No 149
>KOG2048|consensus
Probab=97.42 E-value=0.015 Score=58.16 Aligned_cols=187 Identities=13% Similarity=0.105 Sum_probs=110.1
Q ss_pred ceeEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceE
Q psy11412 8 TYKADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVT 87 (290)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~ 87 (290)
.|-...||-.+. ..+..+++++ +|.+|++++. +|+|.-||+.+. +..-.+..
T Consensus 57 ~w~~~~vi~g~~------------drsIE~L~W~-e~~RLFS~g~-sg~i~EwDl~~l---k~~~~~d~----------- 108 (691)
T KOG2048|consen 57 NWFLEPVIHGPE------------DRSIESLAWA-EGGRLFSSGL-SGSITEWDLHTL---KQKYNIDS----------- 108 (691)
T ss_pred CceeeEEEecCC------------CCceeeEEEc-cCCeEEeecC-CceEEEEecccC---ceeEEecC-----------
Confidence 566666665543 3467888998 6778888876 899999999763 22211111
Q ss_pred EecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeee-eeeccccccc
Q psy11412 88 VIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIME-FIQRNEMRSM 166 (290)
Q Consensus 88 v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~-~~~~~~i~~~ 166 (290)
.|+....|+.+|.+..+.+.++. | .+..++.-. ..+.....
T Consensus 109 --------------------~gg~IWsiai~p~~~~l~Igcdd---------------G-vl~~~s~~p~~I~~~r~l-- 150 (691)
T KOG2048|consen 109 --------------------NGGAIWSIAINPENTILAIGCDD---------------G-VLYDFSIGPDKITYKRSL-- 150 (691)
T ss_pred --------------------CCcceeEEEeCCccceEEeecCC---------------c-eEEEEecCCceEEEEeec--
Confidence 13556889999999999998662 2 111111100 00000000
Q ss_pred CccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEe------------------eEEeeCcee-
Q psy11412 167 PLSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLV------------------GQIFLGGKI- 227 (290)
Q Consensus 167 p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v------------------~~i~~Gg~~- 227 (290)
.+ ..+..-.+.++|+|..|+..+ .++.|.+||+....+..++ ..+..+--+
T Consensus 151 ~r---------q~sRvLslsw~~~~~~i~~Gs-~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~s 220 (691)
T KOG2048|consen 151 MR---------QKSRVLSLSWNPTGTKIAGGS-IDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIAS 220 (691)
T ss_pred cc---------ccceEEEEEecCCccEEEecc-cCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEE
Confidence 00 113456799999999998877 7888999999653332211 111111000
Q ss_pred -cCCCceEEecCCCCC-CCCCcceeecccccCCcceEEEccCCCEEEEEcC
Q psy11412 228 -QSDSGVTVIDDPELD-KQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 228 -~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~ 276 (290)
-..|+|+.||...-+ .+++.. ..+....++.++++.++++|..
T Consensus 221 gDS~G~V~FWd~~~gTLiqS~~~------h~adVl~Lav~~~~d~vfsaGv 265 (691)
T KOG2048|consen 221 GDSAGTVTFWDSIFGTLIQSHSC------HDADVLALAVADNEDRVFSAGV 265 (691)
T ss_pred ecCCceEEEEcccCcchhhhhhh------hhcceeEEEEcCCCCeEEEccC
Confidence 345678889865421 111110 0235788999999999999865
No 150
>KOG0278|consensus
Probab=97.41 E-value=0.0054 Score=55.04 Aligned_cols=109 Identities=14% Similarity=0.237 Sum_probs=65.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceE
Q psy11412 35 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQM 114 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~ 114 (290)
...+.+-...+.+.++. .+++|++||... ...+.++... +.+..
T Consensus 146 Ir~v~wc~eD~~iLSSa-dd~tVRLWD~rT---gt~v~sL~~~--------------------------------s~VtS 189 (334)
T KOG0278|consen 146 IRTVLWCHEDKCILSSA-DDKTVRLWDHRT---GTEVQSLEFN--------------------------------SPVTS 189 (334)
T ss_pred ceeEEEeccCceEEeec-cCCceEEEEecc---CcEEEEEecC--------------------------------CCCcc
Confidence 34455555667777764 589999999975 3344443332 46777
Q ss_pred EEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCEE
Q psy11412 115 FQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYL 194 (290)
Q Consensus 115 vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~L 194 (290)
+-+|+||++|-++.. ..+.-++...|. .++. ..+ +..+....++|+-.+
T Consensus 190 lEvs~dG~ilTia~g-----------------ssV~Fwdaksf~---~lKs--------~k~--P~nV~SASL~P~k~~- 238 (334)
T KOG0278|consen 190 LEVSQDGRILTIAYG-----------------SSVKFWDAKSFG---LLKS--------YKM--PCNVESASLHPKKEF- 238 (334)
T ss_pred eeeccCCCEEEEecC-----------------ceeEEecccccc---ceee--------ccC--ccccccccccCCCce-
Confidence 999999998877532 233334443321 1111 011 223445678999855
Q ss_pred EEEeCCCCcEEEEEec
Q psy11412 195 YTSNWMHGDIRQYDIR 210 (290)
Q Consensus 195 yvs~r~~~~V~v~Dv~ 210 (290)
||+.-.+.-+..||-.
T Consensus 239 fVaGged~~~~kfDy~ 254 (334)
T KOG0278|consen 239 FVAGGEDFKVYKFDYN 254 (334)
T ss_pred EEecCcceEEEEEecc
Confidence 5554367788999885
No 151
>KOG0305|consensus
Probab=97.40 E-value=0.0043 Score=60.83 Aligned_cols=155 Identities=15% Similarity=0.150 Sum_probs=94.8
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
..-+|++.+++|+++|++.+ .++.+.+||..+.. +.. .+..+ .+.
T Consensus 301 ~qeVCgLkws~d~~~lASGg-nDN~~~Iwd~~~~~-p~~--~~~~H-------------------------------~aA 345 (484)
T KOG0305|consen 301 RQEVCGLKWSPDGNQLASGG-NDNVVFIWDGLSPE-PKF--TFTEH-------------------------------TAA 345 (484)
T ss_pred cceeeeeEECCCCCeeccCC-CccceEeccCCCcc-ccE--EEecc-------------------------------cee
Confidence 45789999999999997554 58999999985422 211 11111 145
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDD 191 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDG 191 (290)
+..|+|+|--+-|-.+.+... | ..+..+++.. ...+.. +-.+.++..|..|+..
T Consensus 346 VKA~awcP~q~~lLAsGGGs~--D-----------~~i~fwn~~~---g~~i~~----------vdtgsQVcsL~Wsk~~ 399 (484)
T KOG0305|consen 346 VKALAWCPWQSGLLATGGGSA--D-----------RCIKFWNTNT---GARIDS----------VDTGSQVCSLIWSKKY 399 (484)
T ss_pred eeEeeeCCCccCceEEcCCCc--c-----------cEEEEEEcCC---CcEecc----------cccCCceeeEEEcCCC
Confidence 677999997766665554211 1 1222223221 111111 1124577889999999
Q ss_pred CEEEEE-eCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCE
Q psy11412 192 RYLYTS-NWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKR 270 (290)
Q Consensus 192 r~Lyvs-~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~ 270 (290)
+.|.++ ...++.|.||+... .+.+..+ .|.. ...=.+++||||..
T Consensus 400 kEi~sthG~s~n~i~lw~~ps---~~~~~~l-~gH~------------------------------~RVl~la~SPdg~~ 445 (484)
T KOG0305|consen 400 KELLSTHGYSENQITLWKYPS---MKLVAEL-LGHT------------------------------SRVLYLALSPDGET 445 (484)
T ss_pred CEEEEecCCCCCcEEEEeccc---cceeeee-cCCc------------------------------ceeEEEEECCCCCE
Confidence 776543 44568999999853 3333322 2331 13567999999999
Q ss_pred EEEEcC--CCCCC
Q psy11412 271 IYVSSS--LFSPW 281 (290)
Q Consensus 271 L~Van~--~~~~~ 281 (290)
++++.. +++-|
T Consensus 446 i~t~a~DETlrfw 458 (484)
T KOG0305|consen 446 IVTGAADETLRFW 458 (484)
T ss_pred EEEecccCcEEec
Confidence 999976 55555
No 152
>KOG0294|consensus
Probab=97.37 E-value=0.014 Score=53.87 Aligned_cols=200 Identities=13% Similarity=0.167 Sum_probs=115.8
Q ss_pred eEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCC--EEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceE
Q psy11412 10 KADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDR--YLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVT 87 (290)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr--~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~ 87 (290)
+.-.+.|++..+..+.+ .. =.+..+.+.|+++-. .|.++. .+|.|.+|++.+ =..+..++..
T Consensus 63 etI~IYDm~k~~qlg~l-l~-HagsitaL~F~~~~S~shLlS~s-dDG~i~iw~~~~---W~~~~slK~H---------- 126 (362)
T KOG0294|consen 63 ETIHIYDMRKRKQLGIL-LS-HAGSITALKFYPPLSKSHLLSGS-DDGHIIIWRVGS---WELLKSLKAH---------- 126 (362)
T ss_pred CcEEEEeccchhhhcce-ec-cccceEEEEecCCcchhheeeec-CCCcEEEEEcCC---eEEeeeeccc----------
Confidence 34456677765544443 22 155788999999875 776554 589999999854 2333333221
Q ss_pred EecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccC
Q psy11412 88 VIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMP 167 (290)
Q Consensus 88 v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p 167 (290)
. +.+.+++.||.||.+..+.. +..+..|+++... .
T Consensus 127 --------------------~-~~Vt~lsiHPS~KLALsVg~----------------D~~lr~WNLV~Gr---~----- 161 (362)
T KOG0294|consen 127 --------------------K-GQVTDLSIHPSGKLALSVGG----------------DQVLRTWNLVRGR---V----- 161 (362)
T ss_pred --------------------c-cccceeEecCCCceEEEEcC----------------CceeeeehhhcCc---c-----
Confidence 1 34889999999998877654 2234334443210 0
Q ss_pred ccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCC------Cce--Ee------eEEeeCceecCCCce
Q psy11412 168 LSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTA------HPV--LV------GQIFLGGKIQSDSGV 233 (290)
Q Consensus 168 ~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~------~~~--~v------~~i~~Gg~~~~~~~v 233 (290)
.....-...+.-|.++|.|.+.|++.| +.|-+|.+.+.. .++ .. ....+|+ ++..+
T Consensus 162 -----a~v~~L~~~at~v~w~~~Gd~F~v~~~--~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~---d~~~i 231 (362)
T KOG0294|consen 162 -----AFVLNLKNKATLVSWSPQGDHFVVSGR--NKIDIYQLDNASVFREIENPKRILCATFLDGSELLVGG---DNEWI 231 (362)
T ss_pred -----ceeeccCCcceeeEEcCCCCEEEEEec--cEEEEEecccHhHhhhhhccccceeeeecCCceEEEec---CCceE
Confidence 001111234456999999999888874 678888875421 111 11 1123344 56778
Q ss_pred EEecCCCCCCCCCcceeecccccCCcceEE--EccCCCEEEEEcC--CCCCCCccc
Q psy11412 234 TVIDDPELDKQPDPVIIKGRRFTGSSQMFQ--LSLDGKRIYVSSS--LFSPWDKEI 285 (290)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a--~sPDG~~L~Van~--~~~~~~~~~ 285 (290)
+++|.++. ..+.. +.+.. .+.-+|. ..|++.+|..|++ .+..||...
T Consensus 232 ~~~D~ds~-~~~~~--~~AH~--~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~ 282 (362)
T KOG0294|consen 232 SLKDTDSD-TPLTE--FLAHE--NRVKDIASYTNPEHEYLVTASSDGFIKVWDIDM 282 (362)
T ss_pred EEeccCCC-cccee--eecch--hheeeeEEEecCCceEEEEeccCceEEEEEccc
Confidence 88887652 11110 00100 1233444 4688889988877 778887643
No 153
>KOG1273|consensus
Probab=97.37 E-value=0.0026 Score=58.61 Aligned_cols=148 Identities=18% Similarity=0.174 Sum_probs=85.9
Q ss_pred eEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceE
Q psy11412 35 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQM 114 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~ 114 (290)
...+.||+-|.+|++.+- +|.|.+||+.+-. + +.+..++ + .....
T Consensus 26 a~~~~Fs~~G~~lAvGc~-nG~vvI~D~~T~~-i---ar~lsaH-------~-----------------------~pi~s 70 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCA-NGRVVIYDFDTFR-I---ARMLSAH-------V-----------------------RPITS 70 (405)
T ss_pred cceEEeccCcceeeeecc-CCcEEEEEccccc-h---hhhhhcc-------c-----------------------cceeE
Confidence 557889999999999875 8999999997632 1 1111111 0 23466
Q ss_pred EEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCEE
Q psy11412 115 FQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYL 194 (290)
Q Consensus 115 vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~L 194 (290)
+++|+|||.|..++. .| .+..||+.+....+.++ ++ ...-...++|--+..
T Consensus 71 l~WS~dgr~LltsS~---D~-------------si~lwDl~~gs~l~rir-----------f~--spv~~~q~hp~k~n~ 121 (405)
T KOG1273|consen 71 LCWSRDGRKLLTSSR---DW-------------SIKLWDLLKGSPLKRIR-----------FD--SPVWGAQWHPRKRNK 121 (405)
T ss_pred EEecCCCCEeeeecC---Cc-------------eeEEEeccCCCceeEEE-----------cc--CccceeeeccccCCe
Confidence 999999999998765 11 23344544322111111 11 122345677766666
Q ss_pred EEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEEEEE
Q psy11412 195 YTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVS 274 (290)
Q Consensus 195 yvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L~Va 274 (290)
.++.-.+.+-.+.+++++.+ +.+.. ...+ .+ ...++...|++-|+++|+.
T Consensus 122 ~va~~~~~sp~vi~~s~~~h-~~Lp~-d~d~------dl----------------------n~sas~~~fdr~g~yIitG 171 (405)
T KOG1273|consen 122 CVATIMEESPVVIDFSDPKH-SVLPK-DDDG------DL----------------------NSSASHGVFDRRGKYIITG 171 (405)
T ss_pred EEEEEecCCcEEEEecCCce-eeccC-CCcc------cc----------------------ccccccccccCCCCEEEEe
Confidence 65554565666777766322 11110 0001 00 0134556899999999999
Q ss_pred cC
Q psy11412 275 SS 276 (290)
Q Consensus 275 n~ 276 (290)
|+
T Consensus 172 ts 173 (405)
T KOG1273|consen 172 TS 173 (405)
T ss_pred cC
Confidence 88
No 154
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=97.34 E-value=0.028 Score=51.83 Aligned_cols=202 Identities=13% Similarity=0.097 Sum_probs=95.3
Q ss_pred EEecCCCccCCCCCCCC--C--CCceEEEEEcCC-C----CEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCC
Q psy11412 14 VIDIPAKQVQGYPGGDK--V--PAMVTDILISLD-D----RYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDS 84 (290)
Q Consensus 14 ~~~~~~~~~~~~~~~~~--v--~~~p~~va~SpD-G----r~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~ 84 (290)
++|+...++..+.-.++ + ..+...++++.. + .++|.++.+.+.|-|||+.+...-+++. +.....+
T Consensus 38 ~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~-----~~~~~~p 112 (287)
T PF03022_consen 38 AFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLH-----NSFSPDP 112 (287)
T ss_dssp EEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEET-----CGCTTS-
T ss_pred EEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEec-----CCcceec
Confidence 45666666544430110 1 236667888773 2 7999999999999999997743222221 1111110
Q ss_pred -ceEEecCCCCcCCCCcceeeccccCCCceEEEEcc---CCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeec
Q psy11412 85 -GVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSL---DGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQR 160 (290)
Q Consensus 85 -~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsP---dG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~ 160 (290)
...+.... .. .. ...+..+++++| ||++||-..-.+. .+..+.+..+...
T Consensus 113 ~~~~~~i~g-------~~--~~--~~dg~~gial~~~~~d~r~LYf~~lss~---------------~ly~v~T~~L~~~ 166 (287)
T PF03022_consen 113 DAGPFTIGG-------ES--FQ--WPDGIFGIALSPISPDGRWLYFHPLSSR---------------KLYRVPTSVLRDP 166 (287)
T ss_dssp SSEEEEETT-------EE--EE--ETTSEEEEEE-TTSTTS-EEEEEETT-S---------------EEEEEEHHHHCST
T ss_pred cccceeccC-------ce--Ee--cCCCccccccCCCCCCccEEEEEeCCCC---------------cEEEEEHHHhhCc
Confidence 00000000 00 01 114678888877 8999997543111 1111111000000
Q ss_pred cccccc-CccccCccccCC-CCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecC
Q psy11412 161 NEMRSM-PLSSLGSWKYPA-RSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDD 238 (290)
Q Consensus 161 ~~i~~~-p~~~~~~~~~~~-~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~ 238 (290)
...... -...++. +.. ++...+++++++| .||.++-.++.|..|+...+-.+.-+..+-. |.
T Consensus 167 ~~~~~~~~~~~v~~--lG~k~~~s~g~~~D~~G-~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~-------------d~ 230 (287)
T PF03022_consen 167 SLSDAQALASQVQD--LGDKGSQSDGMAIDPNG-NLYFTDVEQNAIGCWDPDGPYTPENFEILAQ-------------DP 230 (287)
T ss_dssp T--HHH-HHHT-EE--EEE---SECEEEEETTT-EEEEEECCCTEEEEEETTTSB-GCCEEEEEE--------------C
T ss_pred ccccccccccccee--ccccCCCCceEEECCCC-cEEEecCCCCeEEEEeCCCCcCccchheeEE-------------cC
Confidence 000000 0000000 000 1345679999977 5688888899999999754222211221111 11
Q ss_pred CCCCCCCCcceeecccccCCcceEEEcc--CCCEEEEEcCC
Q psy11412 239 PELDKQPDPVIIKGRRFTGSSQMFQLSL--DGKRIYVSSSL 277 (290)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~P~~~a~sP--DG~~L~Van~~ 277 (290)
..+ .+|.+|.+.+ +|..-+.+|++
T Consensus 231 ~~l---------------~~pd~~~i~~~~~g~L~v~snrl 256 (287)
T PF03022_consen 231 RTL---------------QWPDGLKIDPEGDGYLWVLSNRL 256 (287)
T ss_dssp C-G---------------SSEEEEEE-T--TS-EEEEE-S-
T ss_pred cee---------------eccceeeeccccCceEEEEECcc
Confidence 100 2799999999 99888888874
No 155
>KOG2394|consensus
Probab=97.33 E-value=0.00041 Score=67.59 Aligned_cols=61 Identities=28% Similarity=0.383 Sum_probs=45.4
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.++..+|||||++|++... +|.++|||+.. .+++..++ ... +|--
T Consensus 292 ~in~f~FS~DG~~LA~VSq-DGfLRvF~fdt---~eLlg~mk------------------------------SYF-GGLL 336 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQ-DGFLRIFDFDT---QELLGVMK------------------------------SYF-GGLL 336 (636)
T ss_pred cccceeEcCCCceEEEEec-CceEEEeeccH---HHHHHHHH------------------------------hhc-cceE
Confidence 6788999999999998875 89999999964 33332110 011 4566
Q ss_pred EEEEccCCCEEEEEcC
Q psy11412 114 MFQLSLDGKRIYVSSS 129 (290)
Q Consensus 114 ~vafsPdG~~lYv~ne 129 (290)
.+.+|||||++.+..|
T Consensus 337 CvcWSPDGKyIvtGGE 352 (636)
T KOG2394|consen 337 CVCWSPDGKYIVTGGE 352 (636)
T ss_pred EEEEcCCccEEEecCC
Confidence 7999999999888776
No 156
>KOG0640|consensus
Probab=97.32 E-value=0.013 Score=54.07 Aligned_cols=119 Identities=20% Similarity=0.323 Sum_probs=77.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+.++.|.|.|.+|+++.. ..++++||+..- .-.+... |. ..+ ..+..
T Consensus 218 ~vrsiSfHPsGefllvgTd-Hp~~rlYdv~T~--Qcfvsan-------Pd-------------~qh---------t~ai~ 265 (430)
T KOG0640|consen 218 PVRSISFHPSGEFLLVGTD-HPTLRLYDVNTY--QCFVSAN-------PD-------------DQH---------TGAIT 265 (430)
T ss_pred eeeeEeecCCCceEEEecC-CCceeEEeccce--eEeeecC-------cc-------------ccc---------cccee
Confidence 4568999999999998875 679999999651 1111110 00 000 14677
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.+-+|+.|+ ||++.. ++| .+.+||-++ .+-+.++... . ++...-...|+.|||+
T Consensus 266 ~V~Ys~t~~-lYvTaS--------------kDG-~IklwDGVS---~rCv~t~~~A--H-----~gsevcSa~Ftkn~ky 319 (430)
T KOG0640|consen 266 QVRYSSTGS-LYVTAS--------------KDG-AIKLWDGVS---NRCVRTIGNA--H-----GGSEVCSAVFTKNGKY 319 (430)
T ss_pred EEEecCCcc-EEEEec--------------cCC-cEEeecccc---HHHHHHHHhh--c-----CCceeeeEEEccCCeE
Confidence 799999997 787765 233 444555543 2223322211 0 1245566789999999
Q ss_pred EEEEeCCCCcEEEEEecC
Q psy11412 194 LYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d 211 (290)
+..|. .+..|.+|.|..
T Consensus 320 iLsSG-~DS~vkLWEi~t 336 (430)
T KOG0640|consen 320 ILSSG-KDSTVKLWEIST 336 (430)
T ss_pred EeecC-CcceeeeeeecC
Confidence 99888 788999999964
No 157
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=97.29 E-value=0.027 Score=55.16 Aligned_cols=28 Identities=14% Similarity=0.151 Sum_probs=22.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEc
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDI 62 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv 62 (290)
.|.+|+|.|||+.| |+-...|+|++++-
T Consensus 31 ~Pw~maflPDG~ll-VtER~~G~I~~v~~ 58 (454)
T TIGR03606 31 KPWALLWGPDNQLW-VTERATGKILRVNP 58 (454)
T ss_pred CceEEEEcCCCeEE-EEEecCCEEEEEeC
Confidence 79999999999654 66554689988864
No 158
>KOG0643|consensus
Probab=97.28 E-value=0.011 Score=53.44 Aligned_cols=151 Identities=14% Similarity=0.091 Sum_probs=92.7
Q ss_pred EEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeC----CCCeEEEEEcCCCCCceeeeEEeecccccCCCceE
Q psy11412 12 DKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNW----MHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVT 87 (290)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~----~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~ 87 (290)
.+.-|++.+++.... +.+..+..+.|+++|.++.++.. ..+.|.++|+.+...-... ..++.
T Consensus 76 ~kLWDv~tGk~la~~---k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s-----------~ep~~ 141 (327)
T KOG0643|consen 76 AKLWDVETGKQLATW---KTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDS-----------EEPYL 141 (327)
T ss_pred eEEEEcCCCcEEEEe---ecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcc-----------cCceE
Confidence 356678888887776 78888889999999998877643 2578999999753211000 11111
Q ss_pred EecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccC
Q psy11412 88 VIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMP 167 (290)
Q Consensus 88 v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p 167 (290)
.|.- .-+.+..+.++|-++++....|. | .+.++|+..- ...+.
T Consensus 142 kI~t----------------~~skit~a~Wg~l~~~ii~Ghe~---------------G-~is~~da~~g--~~~v~--- 184 (327)
T KOG0643|consen 142 KIPT----------------PDSKITSALWGPLGETIIAGHED---------------G-SISIYDARTG--KELVD--- 184 (327)
T ss_pred EecC----------------CccceeeeeecccCCEEEEecCC---------------C-cEEEEEcccC--ceeee---
Confidence 1110 01466678899999999887662 2 2333333210 00111
Q ss_pred ccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEee
Q psy11412 168 LSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFL 223 (290)
Q Consensus 168 ~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~ 223 (290)
.... ......+|.+|||..+..++. .+.+-.+||+.+ +..+.++.+
T Consensus 185 s~~~------h~~~Ind~q~s~d~T~FiT~s-~Dttakl~D~~t---l~v~Kty~t 230 (327)
T KOG0643|consen 185 SDEE------HSSKINDLQFSRDRTYFITGS-KDTTAKLVDVRT---LEVLKTYTT 230 (327)
T ss_pred chhh------hccccccccccCCcceEEecc-cCccceeeeccc---eeeEEEeee
Confidence 0000 113566799999999988877 577788999864 555555544
No 159
>KOG0284|consensus
Probab=97.27 E-value=0.0089 Score=56.72 Aligned_cols=175 Identities=14% Similarity=0.093 Sum_probs=102.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+..++|||.....+ ++.++|+|.+||+..+..-.++ .|+ |--++
T Consensus 182 aIRdlafSpnDskF~-t~SdDg~ikiWdf~~~kee~vL----~GH------------------------------gwdVk 226 (464)
T KOG0284|consen 182 AIRDLAFSPNDSKFL-TCSDDGTIKIWDFRMPKEERVL----RGH------------------------------GWDVK 226 (464)
T ss_pred hhheeccCCCCceeE-EecCCCeEEEEeccCCchhhee----ccC------------------------------CCCcc
Confidence 577899999666554 5567999999999754322222 221 24688
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.+..||....+++.+. +. .+..||..+ .+-+.++. + .-+.+.++.|+|+|.+
T Consensus 227 svdWHP~kgLiasgsk---------------Dn-lVKlWDprS---g~cl~tlh-----~----HKntVl~~~f~~n~N~ 278 (464)
T KOG0284|consen 227 SVDWHPTKGLIASGSK---------------DN-LVKLWDPRS---GSCLATLH-----G----HKNTVLAVKFNPNGNW 278 (464)
T ss_pred eeccCCccceeEEccC---------------Cc-eeEeecCCC---cchhhhhh-----h----ccceEEEEEEcCCCCe
Confidence 8999999988887543 22 343344322 22232211 0 1246778999999999
Q ss_pred EEEEeCCCCcEEEEEecCC-------CCceE---eeEEeeCcee----cCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 194 LYTSNWMHGDIRQYDIRDT-------AHPVL---VGQIFLGGKI----QSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~-------~~~~~---v~~i~~Gg~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
|.+..+ +.++.+|||... ++.+. ++-.|+-..+ ..|+.|.-+....+...+.++. .+ .+..
T Consensus 279 Llt~sk-D~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~---AH-d~~i 353 (464)
T KOG0284|consen 279 LLTGSK-DQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPP---AH-DGEI 353 (464)
T ss_pred eEEccC-CceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCc---cc-ccce
Confidence 999884 668999999621 11111 1111111111 2466676666553221111110 00 1247
Q ss_pred ceEEEccCCCEEEEEcC
Q psy11412 260 QMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~ 276 (290)
++++..|=|..|+.+..
T Consensus 354 wsl~~hPlGhil~tgsn 370 (464)
T KOG0284|consen 354 WSLAYHPLGHILATGSN 370 (464)
T ss_pred eeeeccccceeEeecCC
Confidence 89999999999988643
No 160
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=97.26 E-value=0.0071 Score=56.81 Aligned_cols=26 Identities=19% Similarity=0.191 Sum_probs=22.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEE
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYD 61 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~d 61 (290)
.|++|++.|||+. ||+.. .|.|.+++
T Consensus 3 ~P~~~a~~pdG~l-~v~e~-~G~i~~~~ 28 (331)
T PF07995_consen 3 NPRSMAFLPDGRL-LVAER-SGRIWVVD 28 (331)
T ss_dssp SEEEEEEETTSCE-EEEET-TTEEEEEE
T ss_pred CceEEEEeCCCcE-EEEeC-CceEEEEe
Confidence 5999999999865 56776 89999999
No 161
>KOG0771|consensus
Probab=97.25 E-value=0.0049 Score=58.36 Aligned_cols=49 Identities=18% Similarity=0.158 Sum_probs=35.6
Q ss_pred EEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCC
Q psy11412 13 KVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDT 65 (290)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~ 65 (290)
+|++-|..+.... +.+-.+.+..+.|||||++|+.... +..+||++.+.
T Consensus 169 Rv~~~Ps~~t~l~--e~~~~~eV~DL~FS~dgk~lasig~--d~~~VW~~~~g 217 (398)
T KOG0771|consen 169 RVWEWPSMLTILE--EIAHHAEVKDLDFSPDGKFLASIGA--DSARVWSVNTG 217 (398)
T ss_pred EEEecCcchhhhh--hHhhcCccccceeCCCCcEEEEecC--CceEEEEeccC
Confidence 5566566665554 2345567889999999999976543 48999999875
No 162
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=97.20 E-value=0.0035 Score=60.57 Aligned_cols=59 Identities=15% Similarity=0.165 Sum_probs=44.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
...++.+||||++++++|. ...|.++|+++ ++++++..-.- +-..
T Consensus 403 ~I~av~vs~dGK~~vvaNd-r~el~vididn-gnv~~idkS~~---------------------------------~lIt 447 (668)
T COG4946 403 NIEAVKVSPDGKKVVVAND-RFELWVIDIDN-GNVRLIDKSEY---------------------------------GLIT 447 (668)
T ss_pred ceEEEEEcCCCcEEEEEcC-ceEEEEEEecC-CCeeEeccccc---------------------------------ceeE
Confidence 6789999999999999985 67999999976 45555532111 2455
Q ss_pred EEEEccCCCEEEEE
Q psy11412 114 MFQLSLDGKRIYVS 127 (290)
Q Consensus 114 ~vafsPdG~~lYv~ 127 (290)
.+++||+++|++-+
T Consensus 448 df~~~~nsr~iAYa 461 (668)
T COG4946 448 DFDWHPNSRWIAYA 461 (668)
T ss_pred EEEEcCCceeEEEe
Confidence 68999999998765
No 163
>KOG2048|consensus
Probab=97.12 E-value=0.017 Score=57.75 Aligned_cols=157 Identities=17% Similarity=0.205 Sum_probs=95.2
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
|....++|+|.+.+.|+++- .+|.|.+|++... .-....+..+ .-+.
T Consensus 25 Ps~I~slA~s~kS~~lAvsR-t~g~IEiwN~~~~--w~~~~vi~g~------------------------------~drs 71 (691)
T KOG2048|consen 25 PSEIVSLAYSHKSNQLAVSR-TDGNIEIWNLSNN--WFLEPVIHGP------------------------------EDRS 71 (691)
T ss_pred ccceEEEEEeccCCceeeec-cCCcEEEEccCCC--ceeeEEEecC------------------------------CCCc
Confidence 45678999999999998875 5899999999752 2222222221 1156
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDD 191 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDG 191 (290)
..++++++.| +|+.+.- .+.+..||+.+..+...+.. -++..-.|+++|-+
T Consensus 72 IE~L~W~e~~-RLFS~g~----------------sg~i~EwDl~~lk~~~~~d~------------~gg~IWsiai~p~~ 122 (691)
T KOG2048|consen 72 IESLAWAEGG-RLFSSGL----------------SGSITEWDLHTLKQKYNIDS------------NGGAIWSIAINPEN 122 (691)
T ss_pred eeeEEEccCC-eEEeecC----------------CceEEEEecccCceeEEecC------------CCcceeEEEeCCcc
Confidence 7889999555 5665443 22444566554322111110 11234468999999
Q ss_pred CEEEEEeCCCCcEEEEEecCCCCceEeeEEe-eCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCE
Q psy11412 192 RYLYTSNWMHGDIRQYDIRDTAHPVLVGQIF-LGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKR 270 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~-~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~ 270 (290)
..|.+++ .++.+..+++. +..|..-. .+.+ -++.-.+.|+|+|.+
T Consensus 123 ~~l~Igc-ddGvl~~~s~~----p~~I~~~r~l~rq-----------------------------~sRvLslsw~~~~~~ 168 (691)
T KOG2048|consen 123 TILAIGC-DDGVLYDFSIG----PDKITYKRSLMRQ-----------------------------KSRVLSLSWNPTGTK 168 (691)
T ss_pred ceEEeec-CCceEEEEecC----CceEEEEeecccc-----------------------------cceEEEEEecCCccE
Confidence 9999998 56655444442 22222211 1110 124567899999999
Q ss_pred EEEEcC--CCCCCCcc
Q psy11412 271 IYVSSS--LFSPWDKE 284 (290)
Q Consensus 271 L~Van~--~~~~~~~~ 284 (290)
|+..+. .+..||.+
T Consensus 169 i~~Gs~Dg~Iriwd~~ 184 (691)
T KOG2048|consen 169 IAGGSIDGVIRIWDVK 184 (691)
T ss_pred EEecccCceEEEEEcC
Confidence 998877 46788764
No 164
>KOG0294|consensus
Probab=97.11 E-value=0.012 Score=54.33 Aligned_cols=110 Identities=15% Similarity=0.211 Sum_probs=64.3
Q ss_pred EEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceEE
Q psy11412 36 TDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMF 115 (290)
Q Consensus 36 ~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~v 115 (290)
..+|+ +|++|++. ..+.+|++||.... ..++.+... .+....+
T Consensus 47 tavAV--s~~~~aSG-ssDetI~IYDm~k~---~qlg~ll~H-------------------------------agsitaL 89 (362)
T KOG0294|consen 47 TALAV--SGPYVASG-SSDETIHIYDMRKR---KQLGILLSH-------------------------------AGSITAL 89 (362)
T ss_pred eEEEe--cceeEecc-CCCCcEEEEeccch---hhhcceecc-------------------------------ccceEEE
Confidence 34554 68998654 46889999998642 222222111 0234556
Q ss_pred EEccCCC--EEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 116 QLSLDGK--RIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 116 afsPdG~--~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.|.+.-. +|..+.+ ++.+.+|++.+......++ +....+.+|+++|-||.
T Consensus 90 ~F~~~~S~shLlS~sd----------------DG~i~iw~~~~W~~~~slK------------~H~~~Vt~lsiHPS~KL 141 (362)
T KOG0294|consen 90 KFYPPLSKSHLLSGSD----------------DGHIIIWRVGSWELLKSLK------------AHKGQVTDLSIHPSGKL 141 (362)
T ss_pred EecCCcchhheeeecC----------------CCcEEEEEcCCeEEeeeec------------ccccccceeEecCCCce
Confidence 6777654 5554433 3355556654421111111 11235788999999997
Q ss_pred EEEEeCCCCcEEEEEecC
Q psy11412 194 LYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d 211 (290)
...-. ++..+..|++-.
T Consensus 142 ALsVg-~D~~lr~WNLV~ 158 (362)
T KOG0294|consen 142 ALSVG-GDQVLRTWNLVR 158 (362)
T ss_pred EEEEc-CCceeeeehhhc
Confidence 55444 789999999864
No 165
>KOG2111|consensus
Probab=97.09 E-value=0.049 Score=50.33 Aligned_cols=64 Identities=22% Similarity=0.299 Sum_probs=48.2
Q ss_pred CceeEEEEccCCCEEEEEeCCCCc-EEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGD-IRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 258 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~-V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (290)
+..+-|+++-+|..|+++. ..|+ |++||..+ ...+.+..-|-. ...
T Consensus 182 s~Iacv~Ln~~Gt~vATaS-tkGTLIRIFdt~~---g~~l~E~RRG~d-----------------------------~A~ 228 (346)
T KOG2111|consen 182 SDIACVALNLQGTLVATAS-TKGTLIRIFDTED---GTLLQELRRGVD-----------------------------RAD 228 (346)
T ss_pred CceeEEEEcCCccEEEEec-cCcEEEEEEEcCC---CcEeeeeecCCc-----------------------------hhe
Confidence 4566789999999998887 5555 88998754 455666555541 115
Q ss_pred cceEEEccCCCEEEEEcC
Q psy11412 259 SQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 259 P~~~a~sPDG~~L~Van~ 276 (290)
-..|+||||+.+|+|++.
T Consensus 229 iy~iaFSp~~s~LavsSd 246 (346)
T KOG2111|consen 229 IYCIAFSPNSSWLAVSSD 246 (346)
T ss_pred EEEEEeCCCccEEEEEcC
Confidence 788999999999999976
No 166
>KOG4497|consensus
Probab=97.06 E-value=0.0036 Score=58.08 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=45.6
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
.+...+..|||||.+..+.+.+-.|.||.+.+. ....+....+ ..
T Consensus 92 agls~~~WSPdgrhiL~tseF~lriTVWSL~t~-~~~~~~~pK~----------------------------------~~ 136 (447)
T KOG4497|consen 92 AGLSSISWSPDGRHILLTSEFDLRITVWSLNTQ-KGYLLPHPKT----------------------------------NV 136 (447)
T ss_pred CcceeeeECCCcceEeeeecceeEEEEEEeccc-eeEEeccccc----------------------------------Cc
Confidence 355678999999999888878999999998532 2222322211 34
Q ss_pred ceEEEccCCCEEEEEcC
Q psy11412 260 QMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~ 276 (290)
..++|.|||++.+.+.+
T Consensus 137 kg~~f~~dg~f~ai~sR 153 (447)
T KOG4497|consen 137 KGYAFHPDGQFCAILSR 153 (447)
T ss_pred eeEEECCCCceeeeeec
Confidence 67999999999998865
No 167
>KOG1445|consensus
Probab=97.05 E-value=0.0024 Score=63.54 Aligned_cols=119 Identities=20% Similarity=0.212 Sum_probs=69.5
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCCeEEEEEcCCCCCceeeeE---EeecccccCCCceEEecCCCCcCCCCcceeeccccC
Q psy11412 34 MVTDILISL-DDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQ---IFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFT 109 (290)
Q Consensus 34 ~p~~va~Sp-DGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~---i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g 109 (290)
.+..+..+| |..+|+|++. +|.|.+|.+...+.++..-+ +.++ -+
T Consensus 629 ~vtDl~WdPFD~~rLAVa~d-dg~i~lWr~~a~gl~e~~~tPe~~lt~------------------------------h~ 677 (1012)
T KOG1445|consen 629 LVTDLHWDPFDDERLAVATD-DGQINLWRLTANGLPENEMTPEKILTI------------------------------HG 677 (1012)
T ss_pred eeeecccCCCChHHeeeccc-CceEEEEEeccCCCCcccCCcceeeec------------------------------cc
Confidence 455677777 7788999985 89999999976543332210 0010 02
Q ss_pred CCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEcc
Q psy11412 110 GSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISL 189 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~Sp 189 (290)
.....+.|||=..-+..+.. | +.++..||+.... .. ..+.+ ...+..+|+.||
T Consensus 678 eKI~slRfHPLAadvLa~as---------y------d~Ti~lWDl~~~~----~~----~~l~g----HtdqIf~~AWSp 730 (1012)
T KOG1445|consen 678 EKITSLRFHPLAADVLAVAS---------Y------DSTIELWDLANAK----LY----SRLVG----HTDQIFGIAWSP 730 (1012)
T ss_pred ceEEEEEecchhhhHhhhhh---------c------cceeeeeehhhhh----hh----heecc----CcCceeEEEECC
Confidence 35566788885422222221 1 1234445543210 00 01111 125678899999
Q ss_pred CCCEEEEEeCCCCcEEEEEecC
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
|||.+..-+ -+++|.||.-..
T Consensus 731 dGr~~AtVc-KDg~~rVy~Prs 751 (1012)
T KOG1445|consen 731 DGRRIATVC-KDGTLRVYEPRS 751 (1012)
T ss_pred CCcceeeee-cCceEEEeCCCC
Confidence 999998888 789999996543
No 168
>KOG0321|consensus
Probab=97.01 E-value=0.014 Score=58.18 Aligned_cols=137 Identities=18% Similarity=0.255 Sum_probs=75.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeee-EEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVG-QIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~-~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
....+..-| |.-++|+..|+.++++||+... ++++ .+..|+ ....
T Consensus 102 AifDl~wap-ge~~lVsasGDsT~r~Wdvk~s---~l~G~~~~~GH------------------------------~~Sv 147 (720)
T KOG0321|consen 102 AIFDLKWAP-GESLLVSASGDSTIRPWDVKTS---RLVGGRLNLGH------------------------------TGSV 147 (720)
T ss_pred eeEeeccCC-CceeEEEccCCceeeeeeeccc---eeecceeeccc------------------------------cccc
Confidence 444677778 8888889889999999999652 2221 123332 1356
Q ss_pred eEEEEccCCCEEEEEcCCCCC---cceeecccccCCCceeecceee-eeee---cccccccCccccCccccCCCCceeE-
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSP---WDKEIYPDLVKTDAAFGSDEIM-EFIQ---RNEMRSMPLSSLGSWKYPARSMVTD- 184 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~---~d~~~~~~~~~~g~~~~~~~~~-~~~~---~~~i~~~p~~~~~~~~~~~~~~~~~- 184 (290)
..++|+|+..-++|+..-++. ||....-. ..+..++.. .... +.+..... .....|-.+ ......
T Consensus 148 kS~cf~~~n~~vF~tGgRDg~illWD~R~n~~-----d~~e~~~~~~~~~~n~~ptpskp~~-kr~~k~kA~-s~ti~ss 220 (720)
T KOG0321|consen 148 KSECFMPTNPAVFCTGGRDGEILLWDCRCNGV-----DALEEFDNRIYGRHNTAPTPSKPLK-KRIRKWKAA-SNTIFSS 220 (720)
T ss_pred chhhhccCCCcceeeccCCCcEEEEEEeccch-----hhHHHHhhhhhccccCCCCCCchhh-ccccccccc-cCceeee
Confidence 779999999999998764332 33211000 000000000 0000 00000000 011222111 122223
Q ss_pred --EEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 185 --ILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 185 --i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
+.+..|...|+.+...|+.|.||||..
T Consensus 221 vTvv~fkDe~tlaSaga~D~~iKVWDLRk 249 (720)
T KOG0321|consen 221 VTVVLFKDESTLASAGAADSTIKVWDLRK 249 (720)
T ss_pred eEEEEEeccceeeeccCCCcceEEEeecc
Confidence 778899999999987899999999964
No 169
>KOG0650|consensus
Probab=96.99 E-value=0.026 Score=56.04 Aligned_cols=58 Identities=12% Similarity=0.155 Sum_probs=42.9
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
+.+.+|.++|-|.+|+. +..+|+|++|-+.. .+++..+.++ +..
T Consensus 401 g~Vr~iSvdp~G~wlas-GsdDGtvriWEi~T---gRcvr~~~~d--------------------------------~~I 444 (733)
T KOG0650|consen 401 GLVRSISVDPSGEWLAS-GSDDGTVRIWEIAT---GRCVRTVQFD--------------------------------SEI 444 (733)
T ss_pred CeEEEEEecCCcceeee-cCCCCcEEEEEeec---ceEEEEEeec--------------------------------cee
Confidence 35678999999999964 45699999999965 5666655554 456
Q ss_pred eEEEEccCCCEEEE
Q psy11412 113 QMFQLSLDGKRIYV 126 (290)
Q Consensus 113 r~vafsPdG~~lYv 126 (290)
+.++|+|.++.-.+
T Consensus 445 ~~vaw~P~~~~~vL 458 (733)
T KOG0650|consen 445 RSVAWNPLSDLCVL 458 (733)
T ss_pred EEEEecCCCCceeE
Confidence 77888888765433
No 170
>KOG0646|consensus
Probab=96.97 E-value=0.012 Score=56.59 Aligned_cols=125 Identities=18% Similarity=0.195 Sum_probs=69.9
Q ss_pred EcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceEEEEcc
Q psy11412 40 ISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSL 119 (290)
Q Consensus 40 ~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsP 119 (290)
+.+-..+||++.. +.++++||+.- ..++..+... ..+..++++|
T Consensus 184 ~Gg~~~rl~TaS~-D~t~k~wdlS~---g~LLlti~fp--------------------------------~si~av~lDp 227 (476)
T KOG0646|consen 184 SGGTNARLYTASE-DRTIKLWDLSL---GVLLLTITFP--------------------------------SSIKAVALDP 227 (476)
T ss_pred CCCccceEEEecC-CceEEEEEecc---ceeeEEEecC--------------------------------CcceeEEEcc
Confidence 3334678998876 78999999965 3444333221 4567799999
Q ss_pred CCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCEEEEEeC
Q psy11412 120 DGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYLYTSNW 199 (290)
Q Consensus 120 dG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r 199 (290)
.++++|+.++.+..+-..++.......+.. .....+ ..+ .++. ..|. .......-+++|-||..|...+
T Consensus 228 ae~~~yiGt~~G~I~~~~~~~~~~~~~~v~--~k~~~~--~~t--~~~~--~~Gh--~~~~~ITcLais~DgtlLlSGd- 296 (476)
T KOG0646|consen 228 AERVVYIGTEEGKIFQNLLFKLSGQSAGVN--QKGRHE--ENT--QINV--LVGH--ENESAITCLAISTDGTLLLSGD- 296 (476)
T ss_pred cccEEEecCCcceEEeeehhcCCccccccc--cccccc--ccc--eeee--eccc--cCCcceeEEEEecCccEEEeeC-
Confidence 999999988743322111110000000000 000000 000 0000 0010 0012567789999999988777
Q ss_pred CCCcEEEEEecC
Q psy11412 200 MHGDIRQYDIRD 211 (290)
Q Consensus 200 ~~~~V~v~Dv~d 211 (290)
.+|.|.|||+..
T Consensus 297 ~dg~VcvWdi~S 308 (476)
T KOG0646|consen 297 EDGKVCVWDIYS 308 (476)
T ss_pred CCCCEEEEecch
Confidence 799999999964
No 171
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=96.97 E-value=0.031 Score=54.26 Aligned_cols=73 Identities=21% Similarity=0.321 Sum_probs=42.4
Q ss_pred CCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEcc
Q psy11412 110 GSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISL 189 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~Sp 189 (290)
+....|..+||||.+.|+|.-.. +-.+++.. ..++.+. .++-....++.+||
T Consensus 402 g~I~av~vs~dGK~~vvaNdr~e----------------l~vididn----gnv~~id--------kS~~~lItdf~~~~ 453 (668)
T COG4946 402 GNIEAVKVSPDGKKVVVANDRFE----------------LWVIDIDN----GNVRLID--------KSEYGLITDFDWHP 453 (668)
T ss_pred cceEEEEEcCCCcEEEEEcCceE----------------EEEEEecC----CCeeEec--------ccccceeEEEEEcC
Confidence 45677999999999999886111 11122211 0011000 11223566799999
Q ss_pred CCCEEEEEeC---CCCcEEEEEec
Q psy11412 190 DDRYLYTSNW---MHGDIRQYDIR 210 (290)
Q Consensus 190 DGr~Lyvs~r---~~~~V~v~Dv~ 210 (290)
++|+++-+-- -...|.++|+.
T Consensus 454 nsr~iAYafP~gy~tq~Iklydm~ 477 (668)
T COG4946 454 NSRWIAYAFPEGYYTQSIKLYDMD 477 (668)
T ss_pred CceeEEEecCcceeeeeEEEEecC
Confidence 9999764321 23578888874
No 172
>KOG3881|consensus
Probab=96.95 E-value=0.011 Score=55.84 Aligned_cols=130 Identities=18% Similarity=0.231 Sum_probs=79.9
Q ss_pred CCCCceEEEEEcCC--CCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccc
Q psy11412 30 KVPAMVTDILISLD--DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRR 107 (290)
Q Consensus 30 ~v~~~p~~va~SpD--Gr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 107 (290)
.||-++.++.|-++ .+.++++. .-+.|++||.....+|. .++...
T Consensus 200 rVPvW~tdi~Fl~g~~~~~fat~T-~~hqvR~YDt~~qRRPV--~~fd~~------------------------------ 246 (412)
T KOG3881|consen 200 RVPVWITDIRFLEGSPNYKFATIT-RYHQVRLYDTRHQRRPV--AQFDFL------------------------------ 246 (412)
T ss_pred eeeeeeccceecCCCCCceEEEEe-cceeEEEecCcccCcce--eEeccc------------------------------
Confidence 36668888998877 66665544 46899999987544433 223221
Q ss_pred cCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEE
Q psy11412 108 FTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILI 187 (290)
Q Consensus 108 ~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~ 187 (290)
-....++++.|+|+++|++|... .+..+|... ...+.. ...+ + .+.+++|+.
T Consensus 247 -E~~is~~~l~p~gn~Iy~gn~~g----------------~l~~FD~r~---~kl~g~----~~kg--~--tGsirsih~ 298 (412)
T KOG3881|consen 247 -ENPISSTGLTPSGNFIYTGNTKG----------------QLAKFDLRG---GKLLGC----GLKG--I--TGSIRSIHC 298 (412)
T ss_pred -cCcceeeeecCCCcEEEEecccc----------------hhheecccC---ceeecc----ccCC--c--cCCcceEEE
Confidence 03456799999999999987621 222233211 111110 0111 0 135788999
Q ss_pred ccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeC
Q psy11412 188 SLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 224 (290)
Q Consensus 188 SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~G 224 (290)
+|.+++|.... .+.-|+|+|+.. .+++..+.++
T Consensus 299 hp~~~~las~G-LDRyvRIhD~kt---rkll~kvYvK 331 (412)
T KOG3881|consen 299 HPTHPVLASCG-LDRYVRIHDIKT---RKLLHKVYVK 331 (412)
T ss_pred cCCCceEEeec-cceeEEEeeccc---chhhhhhhhh
Confidence 99999987666 788999999953 3444444443
No 173
>KOG1063|consensus
Probab=96.93 E-value=0.008 Score=60.28 Aligned_cols=118 Identities=14% Similarity=0.148 Sum_probs=69.1
Q ss_pred eEEEEEcCCCCEEEEEeCCC----CeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCC
Q psy11412 35 VTDILISLDDRYLYTSNWMH----GDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 110 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~----g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 110 (290)
+..+++||+|..|+++|-.. -.|++|+...--....+ . ++. =
T Consensus 528 v~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L---~-~Hs------------------------------L 573 (764)
T KOG1063|consen 528 VYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQEL---E-GHS------------------------------L 573 (764)
T ss_pred EEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhhee---c-ccc------------------------------e
Confidence 55799999999999998653 34888886541111111 1 111 1
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
...+|+||||||+|..++. +.+|.++...+ +.. +-.+ .+... +...-.-+..++||
T Consensus 574 TVT~l~FSpdg~~LLsvsR-DRt~sl~~~~~----~~~----~e~~------fa~~k---------~HtRIIWdcsW~pd 629 (764)
T KOG1063|consen 574 TVTRLAFSPDGRYLLSVSR-DRTVSLYEVQE----DIK----DEFR------FACLK---------AHTRIIWDCSWSPD 629 (764)
T ss_pred EEEEEEECCCCcEEEEeec-CceEEeeeeec----ccc----hhhh------hcccc---------ccceEEEEcccCcc
Confidence 5678999999999998775 23333321110 000 0000 00000 00112334679999
Q ss_pred CCEEEEEeCCCCcEEEEEecC
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d 211 (290)
+++++++.| |.+|.||.+.+
T Consensus 630 e~~FaTaSR-DK~VkVW~~~~ 649 (764)
T KOG1063|consen 630 EKYFATASR-DKKVKVWEEPD 649 (764)
T ss_pred cceeEEecC-CceEEEEeccC
Confidence 999888885 77899999865
No 174
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=96.93 E-value=0.14 Score=46.73 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=30.2
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEe
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIF 222 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~ 222 (290)
....-|.+||||+.|.+.- .+|+|++|++-. .++.+.+.
T Consensus 230 d~i~kmSlSPdg~~La~ih-~sG~lsLW~iPs---L~~~~~W~ 268 (282)
T PF15492_consen 230 DGIFKMSLSPDGSLLACIH-FSGSLSLWEIPS---LRLQRSWK 268 (282)
T ss_pred CceEEEEECCCCCEEEEEE-cCCeEEEEecCc---chhhcccc
Confidence 4678899999999998777 799999999943 34444443
No 175
>KOG0295|consensus
Probab=96.91 E-value=0.019 Score=53.76 Aligned_cols=60 Identities=15% Similarity=0.179 Sum_probs=42.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+..+.|=|-|.++.++.. +.+|..|+++. +-.+.++. + ++ .-.|
T Consensus 195 ~vS~V~f~P~gd~ilS~sr-D~tik~We~~t---g~cv~t~~-~---------------------h~---------ewvr 239 (406)
T KOG0295|consen 195 GVSSVFFLPLGDHILSCSR-DNTIKAWECDT---GYCVKTFP-G---------------------HS---------EWVR 239 (406)
T ss_pred ceeeEEEEecCCeeeeccc-ccceeEEeccc---ceeEEecc-C---------------------ch---------HhEE
Confidence 4557889999999987665 88999999975 23333221 1 11 4789
Q ss_pred EEEEccCCCEEEEEc
Q psy11412 114 MFQLSLDGKRIYVSS 128 (290)
Q Consensus 114 ~vafsPdG~~lYv~n 128 (290)
++..+.||..+...+
T Consensus 240 ~v~v~~DGti~As~s 254 (406)
T KOG0295|consen 240 MVRVNQDGTIIASCS 254 (406)
T ss_pred EEEecCCeeEEEecC
Confidence 999999998777544
No 176
>KOG2315|consensus
Probab=96.90 E-value=0.017 Score=56.68 Aligned_cols=57 Identities=14% Similarity=0.363 Sum_probs=45.2
Q ss_pred EEEEccCCCEEEEEeCCC--CcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcce
Q psy11412 184 DILISLDDRYLYTSNWMH--GDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQM 261 (290)
Q Consensus 184 ~i~~SpDGr~Lyvs~r~~--~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 261 (290)
.+-|||-|+.|..+++|+ |.+.|||+.+ .+.|..+.+-+ ---
T Consensus 316 ~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n---~K~i~~~~a~~---------------------------------tt~ 359 (566)
T KOG2315|consen 316 TAFFNPHGNIILLAGFGNLPGDMEVWDVPN---RKLIAKFKAAN---------------------------------TTV 359 (566)
T ss_pred ceEECCCCCEEEEeecCCCCCceEEEeccc---hhhccccccCC---------------------------------ceE
Confidence 478999999999999886 9999999975 46666554433 233
Q ss_pred EEEccCCCEEEEEcC
Q psy11412 262 FQLSLDGKRIYVSSS 276 (290)
Q Consensus 262 ~a~sPDG~~L~Van~ 276 (290)
+.++|||.++++|.-
T Consensus 360 ~eW~PdGe~flTATT 374 (566)
T KOG2315|consen 360 FEWSPDGEYFLTATT 374 (566)
T ss_pred EEEcCCCcEEEEEec
Confidence 899999999999854
No 177
>KOG2111|consensus
Probab=96.88 E-value=0.082 Score=48.88 Aligned_cols=77 Identities=17% Similarity=0.241 Sum_probs=51.7
Q ss_pred CCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEcc
Q psy11412 110 GSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISL 189 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~Sp 189 (290)
+....|+++-+|..++.+++ .|..+-+++..+ ...+...-+ | ......+.|+|||
T Consensus 182 s~Iacv~Ln~~Gt~vATaSt---------------kGTLIRIFdt~~---g~~l~E~RR----G---~d~A~iy~iaFSp 236 (346)
T KOG2111|consen 182 SDIACVALNLQGTLVATAST---------------KGTLIRIFDTED---GTLLQELRR----G---VDRADIYCIAFSP 236 (346)
T ss_pred CceeEEEEcCCccEEEEecc---------------CcEEEEEEEcCC---CcEeeeeec----C---CchheEEEEEeCC
Confidence 45677999999999998776 233222233332 112221111 1 1235688899999
Q ss_pred CCCEEEEEeCCCCcEEEEEecCC
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d~ 212 (290)
|+.+|.|+. ..++|.+|.+.++
T Consensus 237 ~~s~LavsS-dKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 237 NSSWLAVSS-DKGTLHIFSLRDT 258 (346)
T ss_pred CccEEEEEc-CCCeEEEEEeecC
Confidence 999999998 7899999999763
No 178
>KOG4378|consensus
Probab=96.86 E-value=0.019 Score=55.93 Aligned_cols=118 Identities=17% Similarity=0.262 Sum_probs=75.3
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
+..+..+-+||--|+|.+.....|.|++||+.. ..|..- +.-. |. ..
T Consensus 164 gqsvRll~ys~skr~lL~~asd~G~VtlwDv~g-~sp~~~--~~~~---------------------Hs---------AP 210 (673)
T KOG4378|consen 164 GQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQG-MSPIFH--ASEA---------------------HS---------AP 210 (673)
T ss_pred CCeEEEeecccccceeeEeeccCCeEEEEeccC-CCcccc--hhhh---------------------cc---------CC
Confidence 346779999999999999988899999999853 222211 0000 00 23
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDD 191 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDG 191 (290)
-++|.|+|....|+|+-.+.. .+...|... ++...++ +.. ..-..++|+++|
T Consensus 211 ~~gicfspsne~l~vsVG~Dk---------------ki~~yD~~s---~~s~~~l--------~y~--~Plstvaf~~~G 262 (673)
T KOG4378|consen 211 CRGICFSPSNEALLVSVGYDK---------------KINIYDIRS---QASTDRL--------TYS--HPLSTVAFSECG 262 (673)
T ss_pred cCcceecCCccceEEEecccc---------------eEEEeeccc---cccccee--------eec--CCcceeeecCCc
Confidence 367999999999998755322 222122211 1111110 011 113469999999
Q ss_pred CEEEEEeCCCCcEEEEEecC
Q psy11412 192 RYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d 211 (290)
.+|.+.+ ..+.|..||+.-
T Consensus 263 ~~L~aG~-s~G~~i~YD~R~ 281 (673)
T KOG4378|consen 263 TYLCAGN-SKGELIAYDMRS 281 (673)
T ss_pred eEEEeec-CCceEEEEeccc
Confidence 9999888 789999999954
No 179
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.83 E-value=0.017 Score=56.16 Aligned_cols=18 Identities=33% Similarity=0.287 Sum_probs=14.3
Q ss_pred eEEEEccCCCEEEEEcCC
Q psy11412 113 QMFQLSLDGKRIYVSSSL 130 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel 130 (290)
.+-+|||||++|..+.+-
T Consensus 241 ~~P~fspDG~~l~f~~~r 258 (425)
T COG0823 241 GAPAFSPDGSKLAFSSSR 258 (425)
T ss_pred CCccCCCCCCEEEEEECC
Confidence 345799999999988763
No 180
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.76 E-value=0.051 Score=50.63 Aligned_cols=28 Identities=18% Similarity=0.158 Sum_probs=22.7
Q ss_pred EEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 37 DILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 37 ~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
+-.+.+++..||.++-..+.|+-|+-.+
T Consensus 29 gP~w~~~~~~L~w~DI~~~~i~r~~~~~ 56 (307)
T COG3386 29 GPVWDPDRGALLWVDILGGRIHRLDPET 56 (307)
T ss_pred CccCcCCCCEEEEEeCCCCeEEEecCCc
Confidence 3456789999999999899999888653
No 181
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=96.70 E-value=0.094 Score=47.68 Aligned_cols=186 Identities=20% Similarity=0.277 Sum_probs=99.9
Q ss_pred EEEEEecCCCccCCCCCCCCCCC--ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEE
Q psy11412 11 ADKVIDIPAKQVQGYPGGDKVPA--MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTV 88 (290)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~v~~--~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v 88 (290)
.-+.+|++.+++.... +++. .-.++++- +..||.=.|-++...+||..+ .+.+.++...
T Consensus 69 ~l~~~d~~tg~~~~~~---~l~~~~FgEGit~~--~d~l~qLTWk~~~~f~yd~~t---l~~~~~~~y~----------- 129 (264)
T PF05096_consen 69 SLRKVDLETGKVLQSV---PLPPRYFGEGITIL--GDKLYQLTWKEGTGFVYDPNT---LKKIGTFPYP----------- 129 (264)
T ss_dssp EEEEEETTTSSEEEEE---E-TTT--EEEEEEE--TTEEEEEESSSSEEEEEETTT---TEEEEEEE-S-----------
T ss_pred EEEEEECCCCcEEEEE---ECCccccceeEEEE--CCEEEEEEecCCeEEEEcccc---ceEEEEEecC-----------
Confidence 4566788888877665 5665 44466665 567888889999999999754 5666554332
Q ss_pred ecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCc
Q psy11412 89 IDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPL 168 (290)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~ 168 (290)
+.-.+++ .||+.||+++... .+..+|..+|...+.+. .
T Consensus 130 ---------------------~EGWGLt--~dg~~Li~SDGS~----------------~L~~~dP~~f~~~~~i~---V 167 (264)
T PF05096_consen 130 ---------------------GEGWGLT--SDGKRLIMSDGSS----------------RLYFLDPETFKEVRTIQ---V 167 (264)
T ss_dssp ---------------------SS--EEE--ECSSCEEEE-SSS----------------EEEEE-TTT-SEEEEEE----
T ss_pred ---------------------CcceEEE--cCCCEEEEECCcc----------------ceEEECCcccceEEEEE---E
Confidence 2345666 7889999987621 11111211111111111 0
Q ss_pred cccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcc
Q psy11412 169 SSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPV 248 (290)
Q Consensus 169 ~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~ 248 (290)
. ..+ .|. ....++-.- || .+|+-.|..+.|..+|. .+.++++.+...+...... . +....|.
T Consensus 168 ~-~~g--~pv-~~LNELE~i-~G-~IyANVW~td~I~~Idp---~tG~V~~~iDls~L~~~~~------~-~~~~~~~-- 229 (264)
T PF05096_consen 168 T-DNG--RPV-SNLNELEYI-NG-KIYANVWQTDRIVRIDP---ETGKVVGWIDLSGLRPEVG------R-DKSRQPD-- 229 (264)
T ss_dssp E-ETT--EE----EEEEEEE-TT-EEEEEETTSSEEEEEET---TT-BEEEEEE-HHHHHHHT------S-TTST--T--
T ss_pred E-ECC--EEC-CCcEeEEEE-cC-EEEEEeCCCCeEEEEeC---CCCeEEEEEEhhHhhhccc------c-ccccccc--
Confidence 0 000 011 123333332 55 78999999999988765 4567777776654211000 0 0000000
Q ss_pred eeecccccCCcceEEEccCCCEEEEEcCCCCCCCccc
Q psy11412 249 IIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEI 285 (290)
Q Consensus 249 ~~~~~~~~~~P~~~a~sPDG~~L~Van~~~~~~~~~~ 285 (290)
.+--++||+.|++++|||+. +.|.+.|
T Consensus 230 -------~dVLNGIAyd~~~~~l~vTG---K~Wp~ly 256 (264)
T PF05096_consen 230 -------DDVLNGIAYDPETDRLFVTG---KLWPKLY 256 (264)
T ss_dssp -------TS-EEEEEEETTTTEEEEEE---TT-SEEE
T ss_pred -------CCeeEeEeEeCCCCEEEEEe---CCCCceE
Confidence 11358999999999999985 5676654
No 182
>KOG1963|consensus
Probab=96.69 E-value=0.051 Score=55.79 Aligned_cols=114 Identities=15% Similarity=0.130 Sum_probs=70.9
Q ss_pred EEEEEcCCCCEEEEEeCCCCeEEEEEcCC--CCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 36 TDILISLDDRYLYTSNWMHGDIRQYDIRD--TAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 36 ~~va~SpDGr~Lyva~~~~g~V~v~dv~d--~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
...++||.++++++++. +|+|++|.-.. ..... ...+.=+ -..+.
T Consensus 209 t~~~~spn~~~~Aa~d~-dGrI~vw~d~~~~~~~~t-~t~lHWH-------------------------------~~~V~ 255 (792)
T KOG1963|consen 209 TCVALSPNERYLAAGDS-DGRILVWRDFGSSDDSET-CTLLHWH-------------------------------HDEVN 255 (792)
T ss_pred eeEEeccccceEEEecc-CCcEEEEecccccccccc-ceEEEec-------------------------------ccccc
Confidence 45899999999998875 79999997321 11000 0001000 03566
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.++||+||-+||.... . +.+..|+.... + -+-+|+. ++...+|++|||+..
T Consensus 256 ~L~fS~~G~~LlSGG~---------------E-~VLv~Wq~~T~---~-kqfLPRL---------gs~I~~i~vS~ds~~ 306 (792)
T KOG1963|consen 256 SLSFSSDGAYLLSGGR---------------E-GVLVLWQLETG---K-KQFLPRL---------GSPILHIVVSPDSDL 306 (792)
T ss_pred eeEEecCCceEeeccc---------------c-eEEEEEeecCC---C-ccccccc---------CCeeEEEEEcCCCCe
Confidence 7999999999997432 1 24555554431 1 1111221 245678999999987
Q ss_pred EEEEeCCCCcEEEEEecCC
Q psy11412 194 LYTSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~ 212 (290)
-.+.. .||+|.+....+.
T Consensus 307 ~sl~~-~DNqI~li~~~dl 324 (792)
T KOG1963|consen 307 YSLVL-EDNQIHLIKASDL 324 (792)
T ss_pred EEEEe-cCceEEEEeccch
Confidence 55565 7999999877653
No 183
>KOG0283|consensus
Probab=96.66 E-value=0.042 Score=56.00 Aligned_cols=141 Identities=14% Similarity=0.132 Sum_probs=85.0
Q ss_pred EEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCC
Q psy11412 13 KVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDP 92 (290)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~ 92 (290)
++=.|+..+|+.+. .+...+.+++++|||++..+..+ .|..++|+..+. ......+|.....-
T Consensus 435 RiWsI~d~~Vv~W~---Dl~~lITAvcy~PdGk~avIGt~-~G~C~fY~t~~l-k~~~~~~I~~~~~K------------ 497 (712)
T KOG0283|consen 435 RLWSISDKKVVDWN---DLRDLITAVCYSPDGKGAVIGTF-NGYCRFYDTEGL-KLVSDFHIRLHNKK------------ 497 (712)
T ss_pred EEeecCcCeeEeeh---hhhhhheeEEeccCCceEEEEEe-ccEEEEEEccCC-eEEEeeeEeeccCc------------
Confidence 45578899999998 67789999999999999999887 789999998752 22222223222100
Q ss_pred CCcCCCCcceeeccccCCCceEEEEccCCC-EEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCcccc
Q psy11412 93 ELDKQPDPVIIKGRRFTGSSQMFQLSLDGK-RIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSL 171 (290)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~gPr~vafsPdG~-~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~ 171 (290)
. ..+....++.|.|.-. .+.|++. |. .+-++|..+ ...+.- +
T Consensus 498 ------------k-~~~~rITG~Q~~p~~~~~vLVTSn---------------DS-rIRI~d~~~---~~lv~K-----f 540 (712)
T KOG0283|consen 498 ------------K-KQGKRITGLQFFPGDPDEVLVTSN---------------DS-RIRIYDGRD---KDLVHK-----F 540 (712)
T ss_pred ------------c-ccCceeeeeEecCCCCCeEEEecC---------------CC-ceEEEeccc---hhhhhh-----h
Confidence 0 0113466788886543 3555543 11 222223211 111211 1
Q ss_pred CccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 172 GSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 172 ~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
.|. . .........|+.||+++..+. .+..|++|+..
T Consensus 541 KG~-~-n~~SQ~~Asfs~Dgk~IVs~s-eDs~VYiW~~~ 576 (712)
T KOG0283|consen 541 KGF-R-NTSSQISASFSSDGKHIVSAS-EDSWVYIWKND 576 (712)
T ss_pred ccc-c-cCCcceeeeEccCCCEEEEee-cCceEEEEeCC
Confidence 110 0 011223457999999998887 78899999984
No 184
>KOG2919|consensus
Probab=96.62 E-value=0.054 Score=50.33 Aligned_cols=123 Identities=17% Similarity=0.269 Sum_probs=72.4
Q ss_pred CceEEEEEcCCCC-EEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 33 AMVTDILISLDDR-YLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 33 ~~p~~va~SpDGr-~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
+....++|||-.. .+++..| ...+-+|.-.+. .| +.. +|| -++|
T Consensus 208 giisc~a~sP~~~~~~a~gsY-~q~~giy~~~~~-~p--l~l--lgg-----------------------------h~gG 252 (406)
T KOG2919|consen 208 GIISCFAFSPMDSKTLAVGSY-GQRVGIYNDDGR-RP--LQL--LGG-----------------------------HGGG 252 (406)
T ss_pred ceeeeeeccCCCCcceeeecc-cceeeeEecCCC-Cc--eee--ecc-----------------------------cCCC
Confidence 3566789999877 5555565 568888875432 22 211 111 0378
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDD 191 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDG 191 (290)
..|+.|.+||.+||+.... +. .+..||+.-. +..+- ..+. .....++---..+.|+|
T Consensus 253 vThL~~~edGn~lfsGaRk--------------~d-kIl~WDiR~~--~~pv~-----~L~r-hv~~TNQRI~FDld~~~ 309 (406)
T KOG2919|consen 253 VTHLQWCEDGNKLFSGARK--------------DD-KILCWDIRYS--RDPVY-----ALER-HVGDTNQRILFDLDPKG 309 (406)
T ss_pred eeeEEeccCcCeecccccC--------------CC-eEEEEeehhc--cchhh-----hhhh-hccCccceEEEecCCCC
Confidence 9999999999999986651 12 3333443210 00010 0000 00001222235678999
Q ss_pred CEEEEEeCCCCcEEEEEecCCCC
Q psy11412 192 RYLYTSNWMHGDIRQYDIRDTAH 214 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d~~~ 214 (290)
++|...+ .++.|.+||+.+++.
T Consensus 310 ~~LasG~-tdG~V~vwdlk~~gn 331 (406)
T KOG2919|consen 310 EILASGD-TDGSVRVWDLKDLGN 331 (406)
T ss_pred ceeeccC-CCccEEEEecCCCCC
Confidence 9998776 789999999977655
No 185
>KOG0647|consensus
Probab=96.59 E-value=0.12 Score=47.68 Aligned_cols=63 Identities=17% Similarity=0.354 Sum_probs=41.8
Q ss_pred ceEEEEEcCCCCEEE-EEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 34 MVTDILISLDDRYLY-TSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 34 ~p~~va~SpDGr~Ly-va~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
....|+|||.-..++ .+.| +|+|++|++.+.+.........+ .+.+
T Consensus 29 sIS~l~FSP~~~~~~~A~SW-D~tVR~wevq~~g~~~~ka~~~~--------------------------------~~Pv 75 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAGSW-DGTVRIWEVQNSGQLVPKAQQSH--------------------------------DGPV 75 (347)
T ss_pred chheeEeccccCceEEeccc-CCceEEEEEecCCcccchhhhcc--------------------------------CCCe
Confidence 566899999555555 4455 89999999986432221111101 1345
Q ss_pred eEEEEccCCCEEEEEcC
Q psy11412 113 QMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 113 r~vafsPdG~~lYv~ne 129 (290)
-.++++.||..+|..+-
T Consensus 76 L~v~WsddgskVf~g~~ 92 (347)
T KOG0647|consen 76 LDVCWSDDGSKVFSGGC 92 (347)
T ss_pred EEEEEccCCceEEeecc
Confidence 77999999999998654
No 186
>KOG4497|consensus
Probab=96.58 E-value=0.013 Score=54.42 Aligned_cols=129 Identities=13% Similarity=0.061 Sum_probs=68.9
Q ss_pred CCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCC-CceeEEEEc
Q psy11412 110 GSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPAR-SMVTDILIS 188 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~~~~~i~~S 188 (290)
.|--.+..|||||.+..++|... .+.+|.... .+-. -++-+ ...-+++|+
T Consensus 92 agls~~~WSPdgrhiL~tseF~l---------------riTVWSL~t---~~~~-----------~~~~pK~~~kg~~f~ 142 (447)
T KOG4497|consen 92 AGLSSISWSPDGRHILLTSEFDL---------------RITVWSLNT---QKGY-----------LLPHPKTNVKGYAFH 142 (447)
T ss_pred CcceeeeECCCcceEeeeeccee---------------EEEEEEecc---ceeE-----------EecccccCceeEEEC
Confidence 35566889999999999888322 222222211 0000 01111 233569999
Q ss_pred cCCCEEEEEeCCC--CcEEEEEecCCCCceE-----eeEEe-eCceecCCCc-eEEecCCCCCCCCCcceeecccccCCc
Q psy11412 189 LDDRYLYTSNWMH--GDIRQYDIRDTAHPVL-----VGQIF-LGGKIQSDSG-VTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 189 pDGr~Lyvs~r~~--~~V~v~Dv~d~~~~~~-----v~~i~-~Gg~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
|||+|.....|.+ +=|.++.-. ...+ +.++. +|-..++||+ +.|+|..-. -.+-...-|=+.
T Consensus 143 ~dg~f~ai~sRrDCkdyv~i~~c~---~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Le------ykv~aYe~~lG~ 213 (447)
T KOG4497|consen 143 PDGQFCAILSRRDCKDYVQISSCK---AWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLE------YKVYAYERGLGL 213 (447)
T ss_pred CCCceeeeeecccHHHHHHHHhhH---HHHHHHhcCCCcccccCceECCCCcEEEEecchhh------heeeeeeeccce
Confidence 9999999888765 222222110 0111 12222 3445566666 667874321 000011112256
Q ss_pred ceEEEccCCCEEEEEcC
Q psy11412 260 QMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~ 276 (290)
-.+.+||-+++|+|...
T Consensus 214 k~v~wsP~~qflavGsy 230 (447)
T KOG4497|consen 214 KFVEWSPCNQFLAVGSY 230 (447)
T ss_pred eEEEeccccceEEeecc
Confidence 77999999999999854
No 187
>KOG0264|consensus
Probab=96.57 E-value=0.061 Score=51.49 Aligned_cols=128 Identities=10% Similarity=0.116 Sum_probs=80.7
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
.+-.+.++|+|=+.+|++++..+++|.+||+++...+ +-.+ .++ ...
T Consensus 272 ~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~--lh~~-e~H------------------------------~de 318 (422)
T KOG0264|consen 272 SAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKP--LHTF-EGH------------------------------EDE 318 (422)
T ss_pred CCceeEEEeCCCCCceEEeccCCCcEEEeechhcccC--ceec-cCC------------------------------Ccc
Confidence 5567899999999999989888999999999874321 1110 110 145
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccc----cCcc-ccCccccCCCCceeEEE
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRS----MPLS-SLGSWKYPARSMVTDIL 186 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~----~p~~-~~~~~~~~~~~~~~~i~ 186 (290)
...+.|||+...+..++... +.+.+||....-..+.-.. .|.. ...+ .....+.++.
T Consensus 319 v~~V~WSPh~etvLASSg~D---------------~rl~vWDls~ig~eq~~eda~dgppEllF~Hg---GH~~kV~Dfs 380 (422)
T KOG0264|consen 319 VFQVEWSPHNETVLASSGTD---------------RRLNVWDLSRIGEEQSPEDAEDGPPELLFIHG---GHTAKVSDFS 380 (422)
T ss_pred eEEEEeCCCCCceeEecccC---------------CcEEEEeccccccccChhhhccCCcceeEEec---Cccccccccc
Confidence 67799999999888776522 2333344322111110000 0000 0001 0113577889
Q ss_pred EccCCCEEEEEeCCCCcEEEEEec
Q psy11412 187 ISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 187 ~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
..|...++.+|...+|.+.||..+
T Consensus 381 Wnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 381 WNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCCCCCeEEEEecCCceEEEeecc
Confidence 999999999999889999999886
No 188
>KOG0305|consensus
Probab=96.55 E-value=0.056 Score=53.17 Aligned_cols=32 Identities=22% Similarity=0.382 Sum_probs=28.1
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
...++.+..+++|++|++... +|.|.+||+..
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~-~g~v~iwD~~~ 248 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTS-DGTVQIWDVKE 248 (484)
T ss_pred CCceEEEEECCCCCEEEEeec-CCeEEEEehhh
Confidence 457899999999999998875 89999999865
No 189
>KOG1445|consensus
Probab=96.54 E-value=0.012 Score=58.72 Aligned_cols=61 Identities=21% Similarity=0.233 Sum_probs=40.7
Q ss_pred CceeEEEEccCC-CEEEEEeCCCCcEEEEEecCCC-CceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccC
Q psy11412 180 SMVTDILISLDD-RYLYTSNWMHGDIRQYDIRDTA-HPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 257 (290)
Q Consensus 180 ~~~~~i~~SpDG-r~Lyvs~r~~~~V~v~Dv~d~~-~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 257 (290)
...+.+.|+|=. ..|.++. .+.+|.+||+.+.. ..+++ |. .+
T Consensus 678 eKI~slRfHPLAadvLa~as-yd~Ti~lWDl~~~~~~~~l~-----gH------------------------------td 721 (1012)
T KOG1445|consen 678 EKITSLRFHPLAADVLAVAS-YDSTIELWDLANAKLYSRLV-----GH------------------------------TD 721 (1012)
T ss_pred ceEEEEEecchhhhHhhhhh-ccceeeeeehhhhhhhheec-----cC------------------------------cC
Confidence 357788999943 3455555 78999999996421 11122 22 12
Q ss_pred CcceEEEccCCCEEEEEcC
Q psy11412 258 SSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 258 ~P~~~a~sPDG~~L~Van~ 276 (290)
+..++++||||++++..+.
T Consensus 722 qIf~~AWSpdGr~~AtVcK 740 (1012)
T KOG1445|consen 722 QIFGIAWSPDGRRIATVCK 740 (1012)
T ss_pred ceeEEEECCCCcceeeeec
Confidence 5778999999999887765
No 190
>KOG0308|consensus
Probab=96.52 E-value=0.083 Score=52.97 Aligned_cols=133 Identities=20% Similarity=0.203 Sum_probs=72.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
++-.++.-.....|++++.-++.|.+||+..+.. +.+.+. +.+.+ ..+... .-.+..
T Consensus 119 YVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~-~l~~s~---------n~~t~---~sl~sG----------~k~siY 175 (735)
T KOG0308|consen 119 YVKCLAYIAKNNELVASGGLDRKIFLWDINTGTA-TLVASF---------NNVTV---NSLGSG----------PKDSIY 175 (735)
T ss_pred hheeeeecccCceeEEecCCCccEEEEEccCcch-hhhhhc---------ccccc---ccCCCC----------Ccccee
Confidence 6778887445566666666689999999975321 122110 00000 000000 013456
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.++..+.| ++.|+... ...+.+.|......+-. ..| ....+..+.+++||++
T Consensus 176 SLA~N~t~-t~ivsGgt------------------ek~lr~wDprt~~kimk-----LrG----HTdNVr~ll~~dDGt~ 227 (735)
T KOG0308|consen 176 SLAMNQTG-TIIVSGGT------------------EKDLRLWDPRTCKKIMK-----LRG----HTDNVRVLLVNDDGTR 227 (735)
T ss_pred eeecCCcc-eEEEecCc------------------ccceEEeccccccceee-----eec----cccceEEEEEcCCCCe
Confidence 68888888 55554431 11123333322222111 011 1245788999999999
Q ss_pred EEEEeCCCCcEEEEEecCCCCceEeeEE
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAHPVLVGQI 221 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i 221 (290)
+..+. .+++|.+||+. ..+-+.++
T Consensus 228 ~ls~s-SDgtIrlWdLg---qQrCl~T~ 251 (735)
T KOG0308|consen 228 LLSAS-SDGTIRLWDLG---QQRCLATY 251 (735)
T ss_pred EeecC-CCceEEeeecc---ccceeeeE
Confidence 98777 79999999984 23444443
No 191
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=96.51 E-value=0.0074 Score=39.32 Aligned_cols=34 Identities=26% Similarity=0.473 Sum_probs=28.4
Q ss_pred cCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEee
Q psy11412 189 LDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFL 223 (290)
Q Consensus 189 pDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~ 223 (290)
-.|.++|+++ .++.+.++||++|.+|++++++.+
T Consensus 9 v~g~yaYva~-~~~Gl~IvDISnPs~P~~v~~~~T 42 (42)
T PF08309_consen 9 VSGNYAYVAD-GNNGLVIVDISNPSNPVLVGSYDT 42 (42)
T ss_pred EECCEEEEEe-CCCCEEEEECCCCCCCEEEEEecC
Confidence 3578999998 566789999999999999987653
No 192
>KOG0268|consensus
Probab=96.48 E-value=0.017 Score=54.20 Aligned_cols=115 Identities=12% Similarity=0.151 Sum_probs=72.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
..+.+.|+|-...+.+++..+++|.+||.... . .+..+-++ ..+.
T Consensus 189 ti~svkfNpvETsILas~~sDrsIvLyD~R~~-~--Pl~KVi~~--------------------------------mRTN 233 (433)
T KOG0268|consen 189 SISSVKFNPVETSILASCASDRSIVLYDLRQA-S--PLKKVILT--------------------------------MRTN 233 (433)
T ss_pred ceeEEecCCCcchheeeeccCCceEEEecccC-C--ccceeeee--------------------------------cccc
Confidence 45789999999999999888999999998652 1 22222221 4667
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.|+|+|.+-.+.++||..+. +. .|...+ . .|.....+ ..+.+.++.|||-|+.
T Consensus 234 ~IswnPeafnF~~a~ED~nl---Y~-------------~DmR~l------~-~p~~v~~d----hvsAV~dVdfsptG~E 286 (433)
T KOG0268|consen 234 TICWNPEAFNFVAANEDHNL---YT-------------YDMRNL------S-RPLNVHKD----HVSAVMDVDFSPTGQE 286 (433)
T ss_pred ceecCccccceeeccccccc---ee-------------hhhhhh------c-ccchhhcc----cceeEEEeccCCCcch
Confidence 79999966666666662221 11 111110 0 01110011 1246778999999999
Q ss_pred EEEEeCCCCcEEEEEecC
Q psy11412 194 LYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d 211 (290)
...+. .+.+|.+|-+..
T Consensus 287 fvsgs-yDksIRIf~~~~ 303 (433)
T KOG0268|consen 287 FVSGS-YDKSIRIFPVNH 303 (433)
T ss_pred hcccc-ccceEEEeecCC
Confidence 66555 789999998843
No 193
>KOG1408|consensus
Probab=96.46 E-value=0.034 Score=56.36 Aligned_cols=129 Identities=16% Similarity=0.158 Sum_probs=71.4
Q ss_pred CCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeC-CCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCC
Q psy11412 19 AKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNW-MHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQ 97 (290)
Q Consensus 19 ~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~-~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~ 97 (290)
++..|.++ ...-......+|||++|||+++.-. -.-.++||++...+ +++++ ..+
T Consensus 66 ~~~tQ~hl-vnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~---vVAEf-vdH------------------- 121 (1080)
T KOG1408|consen 66 DSCTQSHL-VNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHG---VVAEF-VDH------------------- 121 (1080)
T ss_pred cccchhhe-ecccCcceeEEEEcCCCcEEEecccCCCccceeeeecccc---chhhh-hhc-------------------
Confidence 44555554 1111224568999999999976532 35679999986532 22211 011
Q ss_pred CCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccC
Q psy11412 98 PDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYP 177 (290)
Q Consensus 98 ~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 177 (290)
. =+...++|+|.+|++..+.. +-|. . +++.+-.....++. . .
T Consensus 122 ---------K--Y~vtcvaFsp~~kyvvSVGs---QHDM-----------I---Vnv~dWr~N~~~as---n-----k-- 163 (1080)
T KOG1408|consen 122 ---------K--YNVTCVAFSPGNKYVVSVGS---QHDM-----------I---VNVNDWRVNSSGAS---N-----K-- 163 (1080)
T ss_pred ---------c--ccceeeeecCCCcEEEeecc---ccce-----------E---EEhhhhhhcccccc---c-----c--
Confidence 1 25677999999997775433 1110 1 12211000000000 0 0
Q ss_pred CCCceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 178 ARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 178 ~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
-...++.++||.||.+..++ ++..|..|-+..
T Consensus 164 iss~Vsav~fsEdgSYfvT~--gnrHvk~wyl~~ 195 (1080)
T KOG1408|consen 164 ISSVVSAVAFSEDGSYFVTS--GNRHVKLWYLQI 195 (1080)
T ss_pred cceeEEEEEEccCCceeeee--eeeeEEEEEeec
Confidence 01346789999999986554 456799998854
No 194
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.43 E-value=0.4 Score=43.24 Aligned_cols=30 Identities=13% Similarity=0.028 Sum_probs=22.4
Q ss_pred ceeEEEEccCCCEEEEEeC--CCCcEEEEEec
Q psy11412 181 MVTDILISLDDRYLYTSNW--MHGDIRQYDIR 210 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r--~~~~V~v~Dv~ 210 (290)
...++++||||.++.+-.+ +.+.|.|--|.
T Consensus 113 ~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~ 144 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVEDGGGGRVYVAGVV 144 (253)
T ss_pred ceEEEEECCCCcEEEEEEecCCCCeEEEEEEE
Confidence 5778999999999886552 34677776664
No 195
>KOG0303|consensus
Probab=96.42 E-value=0.056 Score=51.33 Aligned_cols=117 Identities=14% Similarity=0.102 Sum_probs=73.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeee--EE-eecccccCCCceEEecCCCCcCCCCcceeeccccCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVG--QI-FLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 110 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~--~i-~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 110 (290)
.+..+++.|-+..+.+++..+-+|.||.+.+.+.-..+. .+ ..|+ ..
T Consensus 83 ~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH------------------------------~r 132 (472)
T KOG0303|consen 83 PVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGH------------------------------QR 132 (472)
T ss_pred cccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeec------------------------------ce
Confidence 445789999988888888888999999997643222111 00 1111 13
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
.+-++++||-..-+..+.. .+..+.+|++..- ..+. .+..+...+.+.|+.|
T Consensus 133 rVg~V~wHPtA~NVLlsag---------------~Dn~v~iWnv~tg---eali----------~l~hpd~i~S~sfn~d 184 (472)
T KOG0303|consen 133 RVGLVQWHPTAPNVLLSAG---------------SDNTVSIWNVGTG---EALI----------TLDHPDMVYSMSFNRD 184 (472)
T ss_pred eEEEEeecccchhhHhhcc---------------CCceEEEEeccCC---ceee----------ecCCCCeEEEEEeccC
Confidence 4567888987655444333 1224444554321 1111 1223457889999999
Q ss_pred CCEEEEEeCCCCcEEEEEe
Q psy11412 191 DRYLYTSNWMHGDIRQYDI 209 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv 209 (290)
|..|.+++ .+..|+|||.
T Consensus 185 Gs~l~Ttc-kDKkvRv~dp 202 (472)
T KOG0303|consen 185 GSLLCTTC-KDKKVRVIDP 202 (472)
T ss_pred Cceeeeec-ccceeEEEcC
Confidence 99999999 4778999976
No 196
>KOG0299|consensus
Probab=96.31 E-value=0.043 Score=52.79 Aligned_cols=127 Identities=15% Similarity=0.261 Sum_probs=74.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCce-eeeE---EeecccccCCCceEEecCCCCcCCCCcceeeccccC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPV-LVGQ---IFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFT 109 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~-~~~~---i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g 109 (290)
.+++++++||++++|.+.- +++|.-|++......+ .+.. ....+ +...+. ...+ -
T Consensus 144 s~~~vals~d~~~~fsask-~g~i~kw~v~tgk~~~~i~~~~ev~k~~~---------------~~~k~~----r~~h-~ 202 (479)
T KOG0299|consen 144 SVTSVALSPDDKRVFSASK-DGTILKWDVLTGKKDRYIIERDEVLKSHG---------------NPLKES----RKGH-V 202 (479)
T ss_pred cceEEEeeccccceeecCC-CcceeeeehhcCcccccccccchhhhhcc---------------CCCCcc----cccc-c
Confidence 6789999999999998875 7899999986532211 1111 00000 000000 0000 1
Q ss_pred CCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCC-CCceeEEEEc
Q psy11412 110 GSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPA-RSMVTDILIS 188 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~-~~~~~~i~~S 188 (290)
...-.+++|+|||+|..... +..+.+|+..+ ...+.. +++ ...+..++|-
T Consensus 203 keil~~avS~Dgkylatgg~----------------d~~v~Iw~~~t---~ehv~~----------~~ghr~~V~~L~fr 253 (479)
T KOG0299|consen 203 KEILTLAVSSDGKYLATGGR----------------DRHVQIWDCDT---LEHVKV----------FKGHRGAVSSLAFR 253 (479)
T ss_pred ceeEEEEEcCCCcEEEecCC----------------CceEEEecCcc---cchhhc----------ccccccceeeeeee
Confidence 33445899999998886432 22333344433 222221 112 2356678887
Q ss_pred cCCCEEEEEeCCCCcEEEEEecC
Q psy11412 189 LDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 189 pDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
-.=..||++. .+.+|.+|++..
T Consensus 254 ~gt~~lys~s-~Drsvkvw~~~~ 275 (479)
T KOG0299|consen 254 KGTSELYSAS-ADRSVKVWSIDQ 275 (479)
T ss_pred cCccceeeee-cCCceEEEehhH
Confidence 7777899988 788999999964
No 197
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.29 E-value=0.083 Score=51.45 Aligned_cols=32 Identities=19% Similarity=-0.002 Sum_probs=22.1
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeE--EEEEcC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDI--RQYDIR 63 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V--~v~dv~ 63 (290)
.+.-..-+|||||++|+.+...+|.. .++|+.
T Consensus 237 ~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~ 270 (425)
T COG0823 237 NGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLD 270 (425)
T ss_pred CCccCCccCCCCCCEEEEEECCCCCccEEEEcCC
Confidence 33444668999999999886666664 445553
No 198
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=96.23 E-value=0.1 Score=47.68 Aligned_cols=62 Identities=19% Similarity=0.238 Sum_probs=40.3
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
+..|+.|+.+|||..-|.+.. .+.|--.| +...+. .++.+| .|+.
T Consensus 61 G~ap~dvapapdG~VWft~qg-~gaiGhLd---P~tGev-~~ypLg------------------------------~Ga~ 105 (353)
T COG4257 61 GSAPFDVAPAPDGAVWFTAQG-TGAIGHLD---PATGEV-ETYPLG------------------------------SGAS 105 (353)
T ss_pred CCCccccccCCCCceEEecCc-cccceecC---CCCCce-EEEecC------------------------------CCCC
Confidence 448899999999988887654 55654333 232322 223333 2578
Q ss_pred ceEEEEccCCCEEEEEcC
Q psy11412 112 SQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~ne 129 (290)
|+.|...|||.. +++.+
T Consensus 106 Phgiv~gpdg~~-Witd~ 122 (353)
T COG4257 106 PHGIVVGPDGSA-WITDT 122 (353)
T ss_pred CceEEECCCCCe-eEecC
Confidence 999999999974 44544
No 199
>KOG1009|consensus
Probab=96.22 E-value=0.064 Score=50.96 Aligned_cols=30 Identities=20% Similarity=0.457 Sum_probs=26.7
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
..+++++.+||+.+|.++. .+|++.+||+.
T Consensus 124 ~diydL~Ws~d~~~l~s~s-~dns~~l~Dv~ 153 (434)
T KOG1009|consen 124 DDIYDLAWSPDSNFLVSGS-VDNSVRLWDVH 153 (434)
T ss_pred cchhhhhccCCCceeeeee-ccceEEEEEec
Confidence 4688999999999998777 89999999995
No 200
>KOG0295|consensus
Probab=96.19 E-value=0.052 Score=50.95 Aligned_cols=32 Identities=16% Similarity=0.411 Sum_probs=27.1
Q ss_pred CCceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 179 RSMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 179 ~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
.+++.+++|||-||||+... .+.++.+||+.+
T Consensus 334 dnwVr~~af~p~Gkyi~Sca-DDktlrvwdl~~ 365 (406)
T KOG0295|consen 334 DNWVRGVAFSPGGKYILSCA-DDKTLRVWDLKN 365 (406)
T ss_pred cceeeeeEEcCCCeEEEEEe-cCCcEEEEEecc
Confidence 36889999999999986444 799999999964
No 201
>KOG1036|consensus
Probab=96.17 E-value=0.16 Score=46.84 Aligned_cols=60 Identities=18% Similarity=0.196 Sum_probs=43.6
Q ss_pred eeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcce
Q psy11412 182 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQM 261 (290)
Q Consensus 182 ~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 261 (290)
+.+|+|+|==.+|++++ .+|-|.+||+-...+.+.+...+ ...-.
T Consensus 235 VNai~Fhp~~~tfaTgG-sDG~V~~Wd~~~rKrl~q~~~~~----------------------------------~SI~s 279 (323)
T KOG1036|consen 235 VNAIAFHPIHGTFATGG-SDGIVNIWDLFNRKRLKQLAKYE----------------------------------TSISS 279 (323)
T ss_pred eceeEeccccceEEecC-CCceEEEccCcchhhhhhccCCC----------------------------------CceEE
Confidence 56799999988888877 79999999986432222222111 13566
Q ss_pred EEEccCCCEEEEEcC
Q psy11412 262 FQLSLDGKRIYVSSS 276 (290)
Q Consensus 262 ~a~sPDG~~L~Van~ 276 (290)
++|+-||..|++|.+
T Consensus 280 lsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 280 LSFSMDGSLLAIASS 294 (323)
T ss_pred EEeccCCCeEEEEec
Confidence 999999999999987
No 202
>KOG0321|consensus
Probab=96.16 E-value=0.21 Score=50.04 Aligned_cols=129 Identities=12% Similarity=0.144 Sum_probs=68.4
Q ss_pred EEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceEEEE
Q psy11412 38 ILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQL 117 (290)
Q Consensus 38 va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vaf 117 (290)
+.+..|..+|++++..++.|.|||+......-..+.....+. .+. ..+ --|--.+.+
T Consensus 223 vv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~--------------~t~--------skr-s~G~~nL~l 279 (720)
T KOG0321|consen 223 VVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKY--------------PTH--------SKR-SVGQVNLIL 279 (720)
T ss_pred EEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCc--------------cCc--------ccc-eeeeEEEEe
Confidence 567789999999988899999999976432211110000000 000 000 024556778
Q ss_pred ccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCEEEEE
Q psy11412 118 SLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYLYTS 197 (290)
Q Consensus 118 sPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs 197 (290)
+..|.+||+... ++.| ++| ++... ...|...+.+- +-..-.... .+||||.+|..+
T Consensus 280 DssGt~L~AsCt-D~sI--y~y-------------nm~s~------s~sP~~~~sg~-~~~sf~vks-~lSpd~~~l~Sg 335 (720)
T KOG0321|consen 280 DSSGTYLFASCT-DNSI--YFY-------------NMRSL------SISPVAEFSGK-LNSSFYVKS-ELSPDDCSLLSG 335 (720)
T ss_pred cCCCCeEEEEec-CCcE--EEE-------------ecccc------CcCchhhccCc-ccceeeeee-ecCCCCceEecc
Confidence 888999998765 2211 112 11110 00011111110 000012222 489999999877
Q ss_pred eCCCCcEEEEEecCCCC
Q psy11412 198 NWMHGDIRQYDIRDTAH 214 (290)
Q Consensus 198 ~r~~~~V~v~Dv~d~~~ 214 (290)
. .+...++|-|..+..
T Consensus 336 S-sd~~ayiw~vs~~e~ 351 (720)
T KOG0321|consen 336 S-SDEQAYIWVVSSPEA 351 (720)
T ss_pred C-CCcceeeeeecCccC
Confidence 6 567889999976543
No 203
>KOG2315|consensus
Probab=96.13 E-value=0.14 Score=50.52 Aligned_cols=113 Identities=15% Similarity=0.172 Sum_probs=72.9
Q ss_pred CceEEEEEcCCCCEEEEE-eCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 33 AMVTDILISLDDRYLYTS-NWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva-~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
+-+|++.++|+|+-..|. ++.--++.+||+.- .++-. .+.|
T Consensus 271 GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~----~~v~d----------------------------------f~eg 312 (566)
T KOG2315|consen 271 GPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG----KPVFD----------------------------------FPEG 312 (566)
T ss_pred CCceEEEECCCCCEEEEEEecccceEEEEcCCC----CEeEe----------------------------------CCCC
Confidence 357789999999866554 66677899998742 11211 1257
Q ss_pred ceE-EEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 112 SQM-FQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 112 Pr~-vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
||. +-|+|.|+++.++.= ++ --+.+.+||+.+ ++.+..+- .....-...|||
T Consensus 313 pRN~~~fnp~g~ii~lAGF-GN------------L~G~mEvwDv~n---~K~i~~~~-----------a~~tt~~eW~Pd 365 (566)
T KOG2315|consen 313 PRNTAFFNPHGNIILLAGF-GN------------LPGDMEVWDVPN---RKLIAKFK-----------AANTTVFEWSPD 365 (566)
T ss_pred CccceEECCCCCEEEEeec-CC------------CCCceEEEeccc---hhhccccc-----------cCCceEEEEcCC
Confidence 766 669999999988742 11 122455566654 33343211 122344789999
Q ss_pred CCEEEEEeC-----CCCcEEEEEec
Q psy11412 191 DRYLYTSNW-----MHGDIRQYDIR 210 (290)
Q Consensus 191 Gr~Lyvs~r-----~~~~V~v~Dv~ 210 (290)
|++++++.- -+|.+.+|+.+
T Consensus 366 Ge~flTATTaPRlrvdNg~Kiwhyt 390 (566)
T KOG2315|consen 366 GEYFLTATTAPRLRVDNGIKIWHYT 390 (566)
T ss_pred CcEEEEEeccccEEecCCeEEEEec
Confidence 999998653 37999999995
No 204
>KOG2321|consensus
Probab=96.09 E-value=0.89 Score=45.36 Aligned_cols=100 Identities=18% Similarity=0.193 Sum_probs=56.7
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeE------------EeeCce--e-cCC-CceEEecCCCCCCC
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQ------------IFLGGK--I-QSD-SGVTVIDDPELDKQ 244 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~------------i~~Gg~--~-~~~-~~v~~~~~~~~~~~ 244 (290)
.+++|.|+-||-.+.|.. .+|.|.+||+.. ..+.++.. ++.+.+ + +.| ..+.+||.-+-.
T Consensus 230 svTal~F~d~gL~~aVGt-s~G~v~iyDLRa-~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk-- 305 (703)
T KOG2321|consen 230 SVTALKFRDDGLHVAVGT-STGSVLIYDLRA-SKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGK-- 305 (703)
T ss_pred cceEEEecCCceeEEeec-cCCcEEEEEccc-CCceeecccCCccceeeecccccCCCceEEecchHHhhhcccccCC--
Confidence 588999999999999988 689999999953 22332221 111100 0 111 112333311100
Q ss_pred CCcceeecccccCCcceEEEccCCCEEEEEcCCCCCCCcccCCCC
Q psy11412 245 PDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDL 289 (290)
Q Consensus 245 ~~~~~~~~~~~~~~P~~~a~sPDG~~L~Van~~~~~~~~~~~~~~ 289 (290)
|- .-+-.....+++.+=|++..+|.||.. +..+.-|-|.|
T Consensus 306 ~~----asiEpt~~lND~C~~p~sGm~f~Ane~-~~m~~yyiP~L 345 (703)
T KOG2321|consen 306 PM----ASIEPTSDLNDFCFVPGSGMFFTANES-SKMHTYYIPSL 345 (703)
T ss_pred ce----eeccccCCcCceeeecCCceEEEecCC-CcceeEEcccc
Confidence 00 000001136899999999999999983 44555555655
No 205
>KOG1034|consensus
Probab=96.07 E-value=0.35 Score=45.12 Aligned_cols=91 Identities=26% Similarity=0.323 Sum_probs=61.8
Q ss_pred CceeEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCce
Q psy11412 7 GTYKADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGV 86 (290)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~ 86 (290)
|.--.-+|||....+...+. ...+.....|-+-|+.-.|..+...+-+|++|++++. ..+.. .||.
T Consensus 112 G~~GvIrVid~~~~~~~~~~--~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~---~Cv~V--fGG~------- 177 (385)
T KOG1034|consen 112 GYLGVIRVIDVVSGQCSKNY--RGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTD---VCVAV--FGGV------- 177 (385)
T ss_pred cceeEEEEEecchhhhccce--eccCccchhhhcCCCCCcEEEEecCCceEEEEeccCC---eEEEE--eccc-------
Confidence 33334578888877777664 3457788899999999888888888999999999763 33321 1221
Q ss_pred EEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCC
Q psy11412 87 TVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLF 131 (290)
Q Consensus 87 ~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~ 131 (290)
.+++ ..+-.+-||++|+++. +..++
T Consensus 178 -----------------egHr--deVLSvD~~~~gd~i~-ScGmD 202 (385)
T KOG1034|consen 178 -----------------EGHR--DEVLSVDFSLDGDRIA-SCGMD 202 (385)
T ss_pred -----------------cccc--CcEEEEEEcCCCCeee-ccCCc
Confidence 0111 4567789999999665 34443
No 206
>PF08309 LVIVD: LVIVD repeat; InterPro: IPR013211 This repeat is found in bacterial and archaeal cell surface proteins, many of which are hypothetical. The secondary structure corresponding to this repeat is predicted to comprise 4 beta-strands, which may associate to form a beta-propeller. The repeat copy number varies from 2-14. This repeat is sometimes found with the PKD domain IPR000601 from INTERPRO.
Probab=95.98 E-value=0.043 Score=35.70 Aligned_cols=38 Identities=26% Similarity=0.512 Sum_probs=30.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEE
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQI 74 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i 74 (290)
...++++ .|.++|+++. .+.+.++|++++..|+.++++
T Consensus 3 ~a~~v~v--~g~yaYva~~-~~Gl~IvDISnPs~P~~v~~~ 40 (42)
T PF08309_consen 3 DARDVAV--SGNYAYVADG-NNGLVIVDISNPSNPVLVGSY 40 (42)
T ss_pred eEEEEEE--ECCEEEEEeC-CCCEEEEECCCCCCCEEEEEe
Confidence 4556665 4889999986 467999999999999988754
No 207
>PRK13616 lipoprotein LpqB; Provisional
Probab=95.93 E-value=0.46 Score=48.24 Aligned_cols=27 Identities=11% Similarity=0.060 Sum_probs=20.3
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEe
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDI 209 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv 209 (290)
.+.++.+||||++|++.. .++|.+--|
T Consensus 449 ~Issl~wSpDG~RiA~i~--~g~v~Va~V 475 (591)
T PRK13616 449 PISELQLSRDGVRAAMII--GGKVYLAVV 475 (591)
T ss_pred CcCeEEECCCCCEEEEEE--CCEEEEEEE
Confidence 467899999999998766 356766444
No 208
>KOG4328|consensus
Probab=95.90 E-value=0.11 Score=50.24 Aligned_cols=76 Identities=18% Similarity=0.182 Sum_probs=48.9
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
..++|+++|--.++..+..+.. +..+||...+..+.. |. + ..++....+.+..|||+
T Consensus 324 KI~sv~~NP~~p~~laT~s~D~---------------T~kIWD~R~l~~K~s----p~--l--st~~HrrsV~sAyFSPs 380 (498)
T KOG4328|consen 324 KITSVALNPVCPWFLATASLDQ---------------TAKIWDLRQLRGKAS----PF--L--STLPHRRSVNSAYFSPS 380 (498)
T ss_pred ccceeecCCCCchheeecccCc---------------ceeeeehhhhcCCCC----cc--e--ecccccceeeeeEEcCC
Confidence 6788999999999998877422 333345432211110 00 0 01222235677899999
Q ss_pred CCEEEEEeCCCCcEEEEEec
Q psy11412 191 DRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~ 210 (290)
|-.|.+++ .++.|.|||..
T Consensus 381 ~gtl~TT~-~D~~IRv~dss 399 (498)
T KOG4328|consen 381 GGTLLTTC-QDNEIRVFDSS 399 (498)
T ss_pred CCceEeec-cCCceEEeecc
Confidence 88888888 78999999983
No 209
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=95.87 E-value=1.2 Score=42.51 Aligned_cols=30 Identities=27% Similarity=0.399 Sum_probs=20.7
Q ss_pred eeEEEEccCCCEEEEE-eCCC--CcEEEEEecC
Q psy11412 182 VTDILISLDDRYLYTS-NWMH--GDIRQYDIRD 211 (290)
Q Consensus 182 ~~~i~~SpDGr~Lyvs-~r~~--~~V~v~Dv~d 211 (290)
-.++..|+||++|++. +... +.|.+.|+.+
T Consensus 229 ~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~ 261 (414)
T PF02897_consen 229 FVSVSRSKDGRYLFISSSSGTSESEVYLLDLDD 261 (414)
T ss_dssp EEEEEE-TTSSEEEEEEESSSSEEEEEEEECCC
T ss_pred EEEEEecCcccEEEEEEEccccCCeEEEEeccc
Confidence 4578999999999863 3332 4688888764
No 210
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=95.83 E-value=0.09 Score=49.34 Aligned_cols=17 Identities=29% Similarity=0.538 Sum_probs=12.9
Q ss_pred cceEEEccCCCEEEEEcC
Q psy11412 259 SQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 259 P~~~a~sPDG~~L~Van~ 276 (290)
-..|+|.||| .||++-.
T Consensus 116 g~~l~fgpDG-~LYvs~G 132 (331)
T PF07995_consen 116 GGGLAFGPDG-KLYVSVG 132 (331)
T ss_dssp EEEEEE-TTS-EEEEEEB
T ss_pred CccccCCCCC-cEEEEeC
Confidence 4779999999 8888754
No 211
>KOG0264|consensus
Probab=95.82 E-value=0.091 Score=50.31 Aligned_cols=120 Identities=12% Similarity=0.109 Sum_probs=79.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+..+++.|-...||.+...++.+.+||++.. ..+....+... .+...
T Consensus 229 ~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~~~~~~~~ah-------------------------------~~~vn 276 (422)
T KOG0264|consen 229 VVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TSKPSHSVKAH-------------------------------SAEVN 276 (422)
T ss_pred ceehhhccccchhhheeecCCCeEEEEEcCCC-CCCCccccccc-------------------------------CCcee
Confidence 56789999999999999888999999999752 11111111110 14567
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.++|+|-+.++..+... ++++..+|...+.. .+- .+++ .......|.+||.-..
T Consensus 277 ~~~fnp~~~~ilAT~S~---------------D~tV~LwDlRnL~~--~lh-----~~e~----H~dev~~V~WSPh~et 330 (422)
T KOG0264|consen 277 CVAFNPFNEFILATGSA---------------DKTVALWDLRNLNK--PLH-----TFEG----HEDEVFQVEWSPHNET 330 (422)
T ss_pred EEEeCCCCCceEEeccC---------------CCcEEEeechhccc--Cce-----eccC----CCcceEEEEeCCCCCc
Confidence 79999999888877652 23455566544211 111 1111 1246778999999888
Q ss_pred EEEEeCCCCcEEEEEecC
Q psy11412 194 LYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d 211 (290)
+.+|.-.++.+.|||+..
T Consensus 331 vLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 331 VLASSGTDRRLNVWDLSR 348 (422)
T ss_pred eeEecccCCcEEEEeccc
Confidence 777765889999999964
No 212
>KOG0277|consensus
Probab=95.79 E-value=0.3 Score=44.17 Aligned_cols=179 Identities=18% Similarity=0.221 Sum_probs=100.5
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCC
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 110 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 110 (290)
.......++.|+...-.+.++.++|++++||...+..| +...+- + ..
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~P--i~~~kE------H-------------------------~~ 105 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKP--IHKFKE------H-------------------------KR 105 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcc--hhHHHh------h-------------------------hh
Confidence 34456788999886555555567999999997554332 111100 0 02
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
.+..+-.++--+..++++. || + ++..|+... ++-+.+ +.+ ...-.+..++||-
T Consensus 106 EV~Svdwn~~~r~~~ltsS----WD----------~-TiKLW~~~r---~~Sv~T-----f~g----h~~~Iy~a~~sp~ 158 (311)
T KOG0277|consen 106 EVYSVDWNTVRRRIFLTSS----WD----------G-TIKLWDPNR---PNSVQT-----FNG----HNSCIYQAAFSPH 158 (311)
T ss_pred heEEeccccccceeEEeec----cC----------C-ceEeecCCC---CcceEe-----ecC----CccEEEEEecCCC
Confidence 3444556666666677665 33 2 233333211 122221 111 1246788999996
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCceEeeE----E-------------eeCceecCCCceEEecCCCCCCCCCcceeecc
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQ----I-------------FLGGKIQSDSGVTVIDDPELDKQPDPVIIKGR 253 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~----i-------------~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 253 (290)
---|++|.-+++.+.+||+..++....|.. + .+| .-|+.|+.||...++ .|.-+ +.|.
T Consensus 159 ~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg---~vd~~vr~wDir~~r-~pl~e-L~gh 233 (311)
T KOG0277|consen 159 IPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATG---GVDNLVRGWDIRNLR-TPLFE-LNGH 233 (311)
T ss_pred CCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEec---CCCceEEEEehhhcc-cccee-ecCC
Confidence 556666666899999999977655433211 1 122 357778888876543 33322 1222
Q ss_pred cccCCcceEEEccCCCEEEEEcC
Q psy11412 254 RFTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 254 ~~~~~P~~~a~sPDG~~L~Van~ 276 (290)
.+ ..|.+.|||--.-|.++.+
T Consensus 234 ~~--AVRkvk~Sph~~~lLaSas 254 (311)
T KOG0277|consen 234 GL--AVRKVKFSPHHASLLASAS 254 (311)
T ss_pred ce--EEEEEecCcchhhHhhhcc
Confidence 22 3788899987766655543
No 213
>KOG0316|consensus
Probab=95.78 E-value=1.3 Score=39.89 Aligned_cols=178 Identities=17% Similarity=0.173 Sum_probs=94.5
Q ss_pred CceeEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEE----------ee
Q psy11412 7 GTYKADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQI----------FL 76 (290)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i----------~~ 76 (290)
|.=++-.+-|+++++|....++ -.+-++.+.|..+-..++.+. .+-++++||-... ..+.++.+ .+
T Consensus 78 GgDk~v~vwDV~TGkv~Rr~rg--H~aqVNtV~fNeesSVv~Sgs-fD~s~r~wDCRS~-s~ePiQildea~D~V~Si~v 153 (307)
T KOG0316|consen 78 GGDKAVQVWDVNTGKVDRRFRG--HLAQVNTVRFNEESSVVASGS-FDSSVRLWDCRSR-SFEPIQILDEAKDGVSSIDV 153 (307)
T ss_pred CCCceEEEEEcccCeeeeeccc--ccceeeEEEecCcceEEEecc-ccceeEEEEcccC-CCCccchhhhhcCceeEEEe
Confidence 5556778899999998876511 245688899997777665544 5889999998752 23333211 11
Q ss_pred c-ccc---cCCCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecc
Q psy11412 77 G-GKI---QSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSD 152 (290)
Q Consensus 77 g-~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~ 152 (290)
. +.+ +-++++..++...-. ......|.....+.||+||..+.+. .|.+++.. +
T Consensus 154 ~~heIvaGS~DGtvRtydiR~G~-------l~sDy~g~pit~vs~s~d~nc~La~-~l~stlrL---------------l 210 (307)
T KOG0316|consen 154 AEHEIVAGSVDGTVRTYDIRKGT-------LSSDYFGHPITSVSFSKDGNCSLAS-SLDSTLRL---------------L 210 (307)
T ss_pred cccEEEeeccCCcEEEEEeecce-------eehhhcCCcceeEEecCCCCEEEEe-eccceeee---------------c
Confidence 0 000 012333222211000 0112234566789999999987754 33332221 1
Q ss_pred eeeeeeecccccccCccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCc
Q psy11412 153 EIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 225 (290)
Q Consensus 153 ~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg 225 (290)
|-.+ .+.++. ..|. .....-.+..|+.-...++... .++.|.+||+-+ .+++...++.+
T Consensus 211 Dk~t---GklL~s-----YkGh--kn~eykldc~l~qsdthV~sgS-EDG~Vy~wdLvd---~~~~sk~~~~~ 269 (307)
T KOG0316|consen 211 DKET---GKLLKS-----YKGH--KNMEYKLDCCLNQSDTHVFSGS-EDGKVYFWDLVD---ETQISKLSVVS 269 (307)
T ss_pred ccch---hHHHHH-----hccc--ccceeeeeeeecccceeEEecc-CCceEEEEEecc---ceeeeeeccCC
Confidence 1111 111110 0010 0001233466777666665544 799999999976 34555555544
No 214
>KOG2139|consensus
Probab=95.77 E-value=0.029 Score=52.77 Aligned_cols=68 Identities=21% Similarity=0.334 Sum_probs=50.9
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
..+..+.-.+||..|..+..++.+|.+||++. +....+. +-|. ++-
T Consensus 196 ~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdt-g~~~pL~--~~gl-------------------------------gg~ 241 (445)
T KOG2139|consen 196 NPVTSMQWNEDGTILVTASFGSSSIMIWDPDT-GQKIPLI--PKGL-------------------------------GGF 241 (445)
T ss_pred ceeeEEEEcCCCCEEeecccCcceEEEEcCCC-CCccccc--ccCC-------------------------------Cce
Confidence 46778999999999999999999999999953 2222221 1111 245
Q ss_pred ceEEEccCCCEEEEEc--CCCCCC
Q psy11412 260 QMFQLSLDGKRIYVSS--SLFSPW 281 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van--~~~~~~ 281 (290)
..+-+||||.+||+|. +.+..|
T Consensus 242 slLkwSPdgd~lfaAt~davfrlw 265 (445)
T KOG2139|consen 242 SLLKWSPDGDVLFAATCDAVFRLW 265 (445)
T ss_pred eeEEEcCCCCEEEEecccceeeee
Confidence 6799999999999994 377777
No 215
>KOG0269|consensus
Probab=95.76 E-value=0.15 Score=52.06 Aligned_cols=118 Identities=12% Similarity=0.116 Sum_probs=75.5
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
..+.+.|++..-.+.+++..+|+|.+||+...... .+ .-+ .-...|
T Consensus 135 s~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~-~t---~~~------------------------------nSESiR 180 (839)
T KOG0269|consen 135 SANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSK-ST---FRS------------------------------NSESIR 180 (839)
T ss_pred ceeeeeeccCCccEEEecCCCceEEEEeeeccccc-cc---ccc------------------------------cchhhh
Confidence 67789999999999999989999999999642211 00 001 003578
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.++|+|.-..-|++.- +++.+..||+.-+ ++.... .. ...+.+.-+-.+|++.+
T Consensus 181 DV~fsp~~~~~F~s~~---------------dsG~lqlWDlRqp--~r~~~k-----~~----AH~GpV~c~nwhPnr~~ 234 (839)
T KOG0269|consen 181 DVKFSPGYGNKFASIH---------------DSGYLQLWDLRQP--DRCEKK-----LT----AHNGPVLCLNWHPNREW 234 (839)
T ss_pred ceeeccCCCceEEEec---------------CCceEEEeeccCc--hhHHHH-----hh----cccCceEEEeecCCCce
Confidence 8999998655554432 3445544554221 001110 00 01134566889999999
Q ss_pred EEEEeCCCCcEEEEEecCC
Q psy11412 194 LYTSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~ 212 (290)
|++.+ .+.+|.|||.++.
T Consensus 235 lATGG-RDK~vkiWd~t~~ 252 (839)
T KOG0269|consen 235 LATGG-RDKMVKIWDMTDS 252 (839)
T ss_pred eeecC-CCccEEEEeccCC
Confidence 99888 4889999999754
No 216
>KOG0322|consensus
Probab=95.68 E-value=0.044 Score=49.61 Aligned_cols=68 Identities=22% Similarity=0.294 Sum_probs=47.9
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
++..++.+-||+|.|+++.| ++.|+||.-........+..-+ ++.
T Consensus 252 pGv~gvrIRpD~KIlATAGW-D~RiRVyswrtl~pLAVLkyHs----------------------------------agv 296 (323)
T KOG0322|consen 252 PGVSGVRIRPDGKILATAGW-DHRIRVYSWRTLNPLAVLKYHS----------------------------------AGV 296 (323)
T ss_pred CCccceEEccCCcEEeeccc-CCcEEEEEeccCCchhhhhhhh----------------------------------cce
Confidence 45678999999999999998 6789998764322222222111 257
Q ss_pred ceEEEccCCCEEEEEcC--CCCCCC
Q psy11412 260 QMFQLSLDGKRIYVSSS--LFSPWD 282 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~--~~~~~~ 282 (290)
+.++|+||-..+++|+. .+|-|+
T Consensus 297 n~vAfspd~~lmAaaskD~rISLWk 321 (323)
T KOG0322|consen 297 NAVAFSPDCELMAAASKDARISLWK 321 (323)
T ss_pred eEEEeCCCCchhhhccCCceEEeee
Confidence 89999999888888865 555554
No 217
>KOG0290|consensus
Probab=95.65 E-value=0.19 Score=46.24 Aligned_cols=38 Identities=24% Similarity=0.288 Sum_probs=32.5
Q ss_pred CCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCC
Q psy11412 29 DKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTA 66 (290)
Q Consensus 29 ~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~ 66 (290)
++-+.-++.|+|+.+++.++++...+|+|++||+++..
T Consensus 193 IAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~le 230 (364)
T KOG0290|consen 193 IAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLE 230 (364)
T ss_pred EecCcceeEEEeccCccceEEEecCCCcEEEEEecccc
Confidence 34455788999999999999999999999999997643
No 218
>KOG4227|consensus
Probab=95.61 E-value=0.35 Score=46.10 Aligned_cols=120 Identities=14% Similarity=0.173 Sum_probs=71.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCC---CCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDT---AHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 110 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~---~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 110 (290)
-+.++.||..|++|+. +..+-.+++|.++.. ..|+.++. ++.+-.+
T Consensus 58 CiNAlqFS~N~~~L~S-GGDD~~~~~W~~de~~~~k~~KPI~~------------------------------~~~~H~S 106 (609)
T KOG4227|consen 58 CINALQFSHNDRFLAS-GGDDMHGRVWNVDELMVRKTPKPIGV------------------------------MEHPHRS 106 (609)
T ss_pred ccceeeeccCCeEEee-cCCcceeeeechHHHHhhcCCCCcee------------------------------ccCcccc
Confidence 4578999999999964 445778999998642 11222221 1111124
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
....++|.-..+.||.... .+++..-++.+ .+.+- ...... ..+.++++..||-
T Consensus 107 NIF~L~F~~~N~~~~SG~~----------------~~~VI~HDiEt---~qsi~---V~~~~~----~~~~VY~m~~~P~ 160 (609)
T KOG4227|consen 107 NIFSLEFDLENRFLYSGER----------------WGTVIKHDIET---KQSIY---VANENN----NRGDVYHMDQHPT 160 (609)
T ss_pred ceEEEEEccCCeeEecCCC----------------cceeEeeeccc---ceeee---eecccC----cccceeecccCCC
Confidence 5667999999999996432 12232223221 11111 000000 1136899999998
Q ss_pred CCEEEEEeCCCCcEEEEEecC
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d 211 (290)
...|.++. .++.|.+||+.+
T Consensus 161 DN~~~~~t-~~~~V~~~D~Rd 180 (609)
T KOG4227|consen 161 DNTLIVVT-RAKLVSFIDNRD 180 (609)
T ss_pred CceEEEEe-cCceEEEEeccC
Confidence 77777777 478999999965
No 219
>KOG0307|consensus
Probab=95.60 E-value=0.12 Score=54.52 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=31.1
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCc
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHP 68 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~ 68 (290)
-.+.+.++.|++...-|.+++.++|.|.+||+.....+
T Consensus 115 h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP 152 (1049)
T KOG0307|consen 115 HTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETP 152 (1049)
T ss_pred cCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCC
Confidence 46688899999999966677778999999999875444
No 220
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=95.57 E-value=0.042 Score=34.02 Aligned_cols=28 Identities=29% Similarity=0.468 Sum_probs=24.8
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEE
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYD 61 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~d 61 (290)
..+..++++|++++|++++. +++|++||
T Consensus 12 ~~i~~i~~~~~~~~~~s~~~-D~~i~vwd 39 (39)
T PF00400_consen 12 SSINSIAWSPDGNFLASGSS-DGTIRVWD 39 (39)
T ss_dssp SSEEEEEEETTSSEEEEEET-TSEEEEEE
T ss_pred CcEEEEEEecccccceeeCC-CCEEEEEC
Confidence 35789999999999998885 89999997
No 221
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=95.46 E-value=0.23 Score=48.73 Aligned_cols=18 Identities=11% Similarity=0.259 Sum_probs=14.4
Q ss_pred CCceEEEEccCCCEEEEEc
Q psy11412 110 GSSQMFQLSLDGKRIYVSS 128 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~n 128 (290)
..|++|+|.|||+ ++|+.
T Consensus 30 ~~Pw~maflPDG~-llVtE 47 (454)
T TIGR03606 30 NKPWALLWGPDNQ-LWVTE 47 (454)
T ss_pred CCceEEEEcCCCe-EEEEE
Confidence 5899999999996 55554
No 222
>KOG0292|consensus
Probab=95.40 E-value=0.43 Score=49.76 Aligned_cols=29 Identities=24% Similarity=0.322 Sum_probs=24.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIR 63 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~ 63 (290)
.+-+++|.|..-++.++- .+|.|.+||..
T Consensus 11 RvKglsFHP~rPwILtsl-HsG~IQlWDYR 39 (1202)
T KOG0292|consen 11 RVKGLSFHPKRPWILTSL-HSGVIQLWDYR 39 (1202)
T ss_pred cccceecCCCCCEEEEee-cCceeeeehhh
Confidence 355789999999998774 68999999975
No 223
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=95.32 E-value=0.031 Score=42.22 Aligned_cols=31 Identities=29% Similarity=0.500 Sum_probs=28.5
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
.|.+|++|||+++|||++...+.|++|...+
T Consensus 55 ~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 55 FANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred CCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 7899999999999999999999999998753
No 224
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=95.25 E-value=0.36 Score=44.81 Aligned_cols=29 Identities=10% Similarity=-0.026 Sum_probs=26.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIR 63 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~ 63 (290)
.+++|+++|.| .++|++-+.+...+||..
T Consensus 24 N~WGia~~p~~-~~WVadngT~~~TlYdg~ 52 (336)
T TIGR03118 24 NAWGLSYRPGG-PFWVANTGTGTATLYVGN 52 (336)
T ss_pred ccceeEecCCC-CEEEecCCcceEEeecCC
Confidence 78999999977 678898899999999986
No 225
>KOG1963|consensus
Probab=95.22 E-value=0.54 Score=48.54 Aligned_cols=59 Identities=14% Similarity=0.185 Sum_probs=45.2
Q ss_pred eEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceE
Q psy11412 35 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQM 114 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~ 114 (290)
+..++||+||.+||+++. .+.+.+|.+..+. .+.+.. -|+-..|
T Consensus 254 V~~L~fS~~G~~LlSGG~-E~VLv~Wq~~T~~-kqfLPR----------------------------------Lgs~I~~ 297 (792)
T KOG1963|consen 254 VNSLSFSSDGAYLLSGGR-EGVLVLWQLETGK-KQFLPR----------------------------------LGSPILH 297 (792)
T ss_pred cceeEEecCCceEeeccc-ceEEEEEeecCCC-cccccc----------------------------------cCCeeEE
Confidence 336999999999998876 7899999987643 444432 1356799
Q ss_pred EEEccCCCEEEEEcC
Q psy11412 115 FQLSLDGKRIYVSSS 129 (290)
Q Consensus 115 vafsPdG~~lYv~ne 129 (290)
+++|||+....+..+
T Consensus 298 i~vS~ds~~~sl~~~ 312 (792)
T KOG1963|consen 298 IVVSPDSDLYSLVLE 312 (792)
T ss_pred EEEcCCCCeEEEEec
Confidence 999999998777766
No 226
>KOG0649|consensus
Probab=95.22 E-value=1.2 Score=40.16 Aligned_cols=97 Identities=18% Similarity=0.209 Sum_probs=56.3
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCce------------E-----eeEEeeCceecCCCceEEecCCCCCC
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPV------------L-----VGQIFLGGKIQSDSGVTVIDDPELDK 243 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~------------~-----v~~i~~Gg~~~~~~~v~~~~~~~~~~ 243 (290)
...++-+.|...-++.+. +++.++.||+.+. +.+ + -++|.+| ..||+|++||.++...
T Consensus 116 eINam~ldP~enSi~~Ag-GD~~~y~~dlE~G-~i~r~~rGHtDYvH~vv~R~~~~qilsG---~EDGtvRvWd~kt~k~ 190 (325)
T KOG0649|consen 116 EINAMWLDPSENSILFAG-GDGVIYQVDLEDG-RIQREYRGHTDYVHSVVGRNANGQILSG---AEDGTVRVWDTKTQKH 190 (325)
T ss_pred ccceeEeccCCCcEEEec-CCeEEEEEEecCC-EEEEEEcCCcceeeeeeecccCcceeec---CCCccEEEEeccccce
Confidence 456788998887777777 8999999999652 111 0 1123333 4799999999877431
Q ss_pred CCCcceeecccc-c--CCcceEEEccCCCEEEEEcC-CCCCCC
Q psy11412 244 QPDPVIIKGRRF-T--GSSQMFQLSLDGKRIYVSSS-LFSPWD 282 (290)
Q Consensus 244 ~~~~~~~~~~~~-~--~~P~~~a~sPDG~~L~Van~-~~~~~~ 282 (290)
-...+.++-... . -+-+-+++.-+-.||..... ..+-||
T Consensus 191 v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGgGp~lslwh 233 (325)
T KOG0649|consen 191 VSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGGGPKLSLWH 233 (325)
T ss_pred eEEeccccChhhcCcccCceeEEEeccCceEEecCCCceeEEe
Confidence 000001110000 0 02344777778888877654 444454
No 227
>KOG1036|consensus
Probab=95.15 E-value=0.82 Score=42.21 Aligned_cols=30 Identities=27% Similarity=0.563 Sum_probs=26.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
....+-|+|.+..|+++.| +|++++|++..
T Consensus 15 ~IS~v~f~~~~~~LLvssW-DgslrlYdv~~ 44 (323)
T KOG1036|consen 15 GISSVKFSPSSSDLLVSSW-DGSLRLYDVPA 44 (323)
T ss_pred ceeeEEEcCcCCcEEEEec-cCcEEEEeccc
Confidence 5678999999999999999 79999999964
No 228
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=95.14 E-value=0.13 Score=48.46 Aligned_cols=91 Identities=19% Similarity=0.208 Sum_probs=42.1
Q ss_pred eeEEEEccCCCEEEEEeCCCCcEEEEEecC---CC--CceEe-eEEeeCceecCCCceEEecCCCCCCC--CCcceeecc
Q psy11412 182 VTDILISLDDRYLYTSNWMHGDIRQYDIRD---TA--HPVLV-GQIFLGGKIQSDSGVTVIDDPELDKQ--PDPVIIKGR 253 (290)
Q Consensus 182 ~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d---~~--~~~~v-~~i~~Gg~~~~~~~v~~~~~~~~~~~--~~~~~~~~~ 253 (290)
..++-+||||++|+..-..+..|..+.+.+ +. .++.. -..|.-|.-.+.-.|.|++....... +.+..+.
T Consensus 103 ~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~-- 180 (353)
T PF00930_consen 103 RSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLN-- 180 (353)
T ss_dssp SBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHH--
T ss_pred ccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccC--
Confidence 356899999999887655566666666632 21 12221 12232222112223555666543211 0000000
Q ss_pred cccCCcceEEEccCCCEEEEE
Q psy11412 254 RFTGSSQMFQLSLDGKRIYVS 274 (290)
Q Consensus 254 ~~~~~P~~~a~sPDG~~L~Va 274 (290)
.....-..+.+++|+++|++.
T Consensus 181 ~~~~yl~~v~W~~d~~~l~~~ 201 (353)
T PF00930_consen 181 PQDYYLTRVGWSPDGKRLWVQ 201 (353)
T ss_dssp TSSEEEEEEEEEETTEEEEEE
T ss_pred CCccCcccceecCCCcEEEEE
Confidence 001135789999999966664
No 229
>KOG4328|consensus
Probab=95.12 E-value=0.7 Score=44.77 Aligned_cols=66 Identities=11% Similarity=0.183 Sum_probs=43.8
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcc
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 260 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (290)
...+|++.|--.++.++.-.++++.+||+......+. -. |+.+ +|+ ....
T Consensus 324 KI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s-p~------------lst~--------~Hr---------rsV~ 373 (498)
T KOG4328|consen 324 KITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS-PF------------LSTL--------PHR---------RSVN 373 (498)
T ss_pred ccceeecCCCCchheeecccCcceeeeehhhhcCCCC-cc------------eecc--------ccc---------ceee
Confidence 4677999999888887776789999999853211110 00 1111 121 1468
Q ss_pred eEEEccCCCEEEEEcC
Q psy11412 261 MFQLSLDGKRIYVSSS 276 (290)
Q Consensus 261 ~~a~sPDG~~L~Van~ 276 (290)
++-|||+|.+|+.+++
T Consensus 374 sAyFSPs~gtl~TT~~ 389 (498)
T KOG4328|consen 374 SAYFSPSGGTLLTTCQ 389 (498)
T ss_pred eeEEcCCCCceEeecc
Confidence 8999999999888776
No 230
>KOG3914|consensus
Probab=95.10 E-value=0.39 Score=45.60 Aligned_cols=145 Identities=18% Similarity=0.203 Sum_probs=78.4
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCC-ceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAH-PVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~-~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
.+..+..+++|+.||+++. +....++++...-. .+.+....+ ...|
T Consensus 64 a~~~~~~s~~~~llAv~~~-~K~~~~f~~~~~~~~~kl~~~~~v--------------------------------~~~~ 110 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATS-SKQRAVFDYRENPKGAKLLDVSCV--------------------------------PKRP 110 (390)
T ss_pred cccccccCCCceEEEEEeC-CCceEEEEEecCCCcceeeeEeec--------------------------------ccCc
Confidence 5667889999999999986 44656666643211 122211111 1356
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
+.+.|-.+-...-|+... | -...+++..... +... + ..| .-....+|++|||++
T Consensus 111 ~ai~~~~~~~sv~v~dka---------------g-D~~~~di~s~~~-~~~~--~---~lG----hvSml~dVavS~D~~ 164 (390)
T KOG3914|consen 111 TAISFIREDTSVLVADKA---------------G-DVYSFDILSADS-GRCE--P---ILG----HVSMLLDVAVSPDDQ 164 (390)
T ss_pred ceeeeeeccceEEEEeec---------------C-Cceeeeeecccc-cCcc--h---hhh----hhhhhheeeecCCCC
Confidence 667777777766665431 1 111123322100 0000 0 000 114678899999999
Q ss_pred EEEEEeCCCCcEEEEEecCC--------CCceEeeEEeeCce-----ecCCCceEEecC
Q psy11412 193 YLYTSNWMHGDIRQYDIRDT--------AHPVLVGQIFLGGK-----IQSDSGVTVIDD 238 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d~--------~~~~~v~~i~~Gg~-----~~~~~~v~~~~~ 238 (290)
++..++| ++.|+|-....+ ++...+-++.++.. -+-|++|++||-
T Consensus 165 ~IitaDR-DEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~ 222 (390)
T KOG3914|consen 165 FIITADR-DEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDI 222 (390)
T ss_pred EEEEecC-CceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEEEec
Confidence 9999996 667776554321 12223333333211 045788999983
No 231
>KOG0313|consensus
Probab=95.06 E-value=0.24 Score=46.92 Aligned_cols=117 Identities=17% Similarity=0.232 Sum_probs=71.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+.+|.+++ -..+|.+.+ +.+|++||+..++ .+..+..+ ..-.
T Consensus 262 ~Vs~V~w~d-~~v~yS~Sw-DHTIk~WDletg~---~~~~~~~~--------------------------------ksl~ 304 (423)
T KOG0313|consen 262 PVSSVVWSD-ATVIYSVSW-DHTIKVWDLETGG---LKSTLTTN--------------------------------KSLN 304 (423)
T ss_pred ceeeEEEcC-CCceEeecc-cceEEEEEeeccc---ceeeeecC--------------------------------ccee
Confidence 355677775 888998887 7899999997633 22222111 2345
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.+..+|.-+.|.+.+.. ..+. .++....++ .+...+ +.+ ..+++.++.-||-..|
T Consensus 305 ~i~~~~~~~Ll~~gssd-r~ir--l~DPR~~~g-s~v~~s-----------------~~g----H~nwVssvkwsp~~~~ 359 (423)
T KOG0313|consen 305 CISYSPLSKLLASGSSD-RHIR--LWDPRTGDG-SVVSQS-----------------LIG----HKNWVSSVKWSPTNEF 359 (423)
T ss_pred EeecccccceeeecCCC-Ccee--ecCCCCCCC-ceeEEe-----------------eec----chhhhhheecCCCCce
Confidence 68889988887765441 1110 011100111 111010 001 2256778999999999
Q ss_pred EEEEeCCCCcEEEEEecCC
Q psy11412 194 LYTSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~ 212 (290)
.++|.-.+|++.+||+..+
T Consensus 360 ~~~S~S~D~t~klWDvRS~ 378 (423)
T KOG0313|consen 360 QLVSGSYDNTVKLWDVRST 378 (423)
T ss_pred EEEEEecCCeEEEEEeccC
Confidence 9999989999999999654
No 232
>KOG0641|consensus
Probab=95.03 E-value=1.1 Score=40.07 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=24.8
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
.....+.|||-..+|.+.. .++.|.+-|+.
T Consensus 274 adir~vrfsp~a~yllt~s-yd~~ikltdlq 303 (350)
T KOG0641|consen 274 ADIRCVRFSPGAHYLLTCS-YDMKIKLTDLQ 303 (350)
T ss_pred cceeEEEeCCCceEEEEec-ccceEEEeecc
Confidence 4567799999999987766 78999998884
No 233
>KOG0313|consensus
Probab=94.99 E-value=0.89 Score=43.15 Aligned_cols=99 Identities=18% Similarity=0.232 Sum_probs=61.3
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCC------ceEeeEEeeCce---e---cCCCceEEecCCCCCCCCCc
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAH------PVLVGQIFLGGK---I---QSDSGVTVIDDPELDKQPDP 247 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~------~~~v~~i~~Gg~---~---~~~~~v~~~~~~~~~~~~~~ 247 (290)
..+.+|.+++ -..+|...| +.+|.+||+...+. ++.+-.+..+.. + +.|.-++|+|++.....-..
T Consensus 261 ~~Vs~V~w~d-~~v~yS~Sw-DHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~ 338 (423)
T KOG0313|consen 261 EPVSSVVWSD-ATVIYSVSW-DHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVS 338 (423)
T ss_pred cceeeEEEcC-CCceEeecc-cceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeE
Confidence 3577888888 678898886 66999999953211 111222222211 1 45566889987764322222
Q ss_pred ceeecccccCCcceEEEccCCCEEEEEcC---CCCCCC
Q psy11412 248 VIIKGRRFTGSSQMFQLSLDGKRIYVSSS---LFSPWD 282 (290)
Q Consensus 248 ~~~~~~~~~~~P~~~a~sPDG~~L~Van~---~~~~~~ 282 (290)
..+.|.. ++...+..+|.-.+++++.+ +.+-||
T Consensus 339 ~s~~gH~--nwVssvkwsp~~~~~~~S~S~D~t~klWD 374 (423)
T KOG0313|consen 339 QSLIGHK--NWVSSVKWSPTNEFQLVSGSYDNTVKLWD 374 (423)
T ss_pred Eeeecch--hhhhheecCCCCceEEEEEecCCeEEEEE
Confidence 2444443 36889999999999999865 444454
No 234
>KOG0268|consensus
Probab=94.87 E-value=0.21 Score=47.09 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=26.0
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
....+.|+|-...+.+++..+++|.+||..
T Consensus 189 ti~svkfNpvETsILas~~sDrsIvLyD~R 218 (433)
T KOG0268|consen 189 SISSVKFNPVETSILASCASDRSIVLYDLR 218 (433)
T ss_pred ceeEEecCCCcchheeeeccCCceEEEecc
Confidence 346689999999999999889999999984
No 235
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=94.78 E-value=0.078 Score=32.74 Aligned_cols=28 Identities=32% Similarity=0.503 Sum_probs=25.0
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEE
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYD 208 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~D 208 (290)
.....|+++|++++|+++. .++.|.+||
T Consensus 12 ~~i~~i~~~~~~~~~~s~~-~D~~i~vwd 39 (39)
T PF00400_consen 12 SSINSIAWSPDGNFLASGS-SDGTIRVWD 39 (39)
T ss_dssp SSEEEEEEETTSSEEEEEE-TTSEEEEEE
T ss_pred CcEEEEEEecccccceeeC-CCCEEEEEC
Confidence 4577899999999999998 789999997
No 236
>KOG1063|consensus
Probab=94.68 E-value=0.05 Score=54.79 Aligned_cols=68 Identities=18% Similarity=0.212 Sum_probs=47.6
Q ss_pred ceeEEEEccCCCEEEEEeCCC----CcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeeccccc
Q psy11412 181 MVTDILISLDDRYLYTSNWMH----GDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFT 256 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~----~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 256 (290)
..+.+++||+|.+++.+++.+ ..|.+|.... ...++.+ .+.+ +
T Consensus 527 Ev~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~---W~~~~~L-~~Hs------L----------------------- 573 (764)
T KOG1063|consen 527 EVYALAISPTGNLIASACKSSLKEHAVIRLWNTAN---WLQVQEL-EGHS------L----------------------- 573 (764)
T ss_pred eEEEEEecCCCCEEeehhhhCCccceEEEEEeccc---hhhhhee-cccc------e-----------------------
Confidence 488899999999999998754 5688887643 3333322 1221 0
Q ss_pred CCcceEEEccCCCEEEEEcC--CCCCCC
Q psy11412 257 GSSQMFQLSLDGKRIYVSSS--LFSPWD 282 (290)
Q Consensus 257 ~~P~~~a~sPDG~~L~Van~--~~~~~~ 282 (290)
....++|||||++|+.+++ +.+-|.
T Consensus 574 -TVT~l~FSpdg~~LLsvsRDRt~sl~~ 600 (764)
T KOG1063|consen 574 -TVTRLAFSPDGRYLLSVSRDRTVSLYE 600 (764)
T ss_pred -EEEEEEECCCCcEEEEeecCceEEeee
Confidence 3667999999999999977 555544
No 237
>KOG3881|consensus
Probab=94.66 E-value=0.95 Score=43.05 Aligned_cols=61 Identities=20% Similarity=0.345 Sum_probs=45.0
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcc
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 260 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (290)
....+.+.|+|.++|++| ..+.+..||+.. .++++.-. +| . .|.++
T Consensus 249 ~is~~~l~p~gn~Iy~gn-~~g~l~~FD~r~---~kl~g~~~-kg---------------------------~--tGsir 294 (412)
T KOG3881|consen 249 PISSTGLTPSGNFIYTGN-TKGQLAKFDLRG---GKLLGCGL-KG---------------------------I--TGSIR 294 (412)
T ss_pred cceeeeecCCCcEEEEec-ccchhheecccC---ceeecccc-CC---------------------------c--cCCcc
Confidence 456799999999999999 789999999853 34433211 11 1 24689
Q ss_pred eEEEccCCCEEEEEc
Q psy11412 261 MFQLSLDGKRIYVSS 275 (290)
Q Consensus 261 ~~a~sPDG~~L~Van 275 (290)
.+...|.+++|+.+.
T Consensus 295 sih~hp~~~~las~G 309 (412)
T KOG3881|consen 295 SIHCHPTHPVLASCG 309 (412)
T ss_pred eEEEcCCCceEEeec
Confidence 999999999888764
No 238
>KOG0650|consensus
Probab=94.65 E-value=0.79 Score=45.90 Aligned_cols=181 Identities=12% Similarity=0.135 Sum_probs=105.0
Q ss_pred CCceEEEEEcCCCCEEEEEeCC--CCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWM--HGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFT 109 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~--~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g 109 (290)
+..+..+....+|.||++.... .-.|.|++++..... .. . . ...
T Consensus 521 ~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ--~P---F--------------------------~---ksk 566 (733)
T KOG0650|consen 521 PKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQ--SP---F--------------------------R---KSK 566 (733)
T ss_pred CCccceeeeecCCceEEEeccCCCcceEEEEeccccccc--Cc---h--------------------------h---hcC
Confidence 4456678888999999988653 345777776542111 00 0 0 012
Q ss_pred CCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEcc
Q psy11412 110 GSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISL 189 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~Sp 189 (290)
+.|..+.|||.-.+|+|+.. .+ + .+-++.....+.. .++...+...++++|
T Consensus 567 G~vq~v~FHPs~p~lfVaTq----~~-------------v---RiYdL~kqelvKk---------L~tg~kwiS~msihp 617 (733)
T KOG0650|consen 567 GLVQRVKFHPSKPYLFVATQ----RS-------------V---RIYDLSKQELVKK---------LLTGSKWISSMSIHP 617 (733)
T ss_pred CceeEEEecCCCceEEEEec----cc-------------e---EEEehhHHHHHHH---------HhcCCeeeeeeeecC
Confidence 56888999999999999865 11 1 1122211111221 112234678899999
Q ss_pred CCCEEEEEeCCCCcEEEEEecCCCCc--------eEeeEE------eeCceecCCCceEEecC---CCCCCCCCcc---e
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRDTAHP--------VLVGQI------FLGGKIQSDSGVTVIDD---PELDKQPDPV---I 249 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d~~~~--------~~v~~i------~~Gg~~~~~~~v~~~~~---~~~~~~~~~~---~ 249 (290)
.|--|.+++ .++.+-+||++-...+ +.+..+ +.=-..++|+++.|.-. .++-..|... .
T Consensus 618 ~GDnli~gs-~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~ 696 (733)
T KOG0650|consen 618 NGDNLILGS-YDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKR 696 (733)
T ss_pred CCCeEEEec-CCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeee
Confidence 999999999 7889999999522111 111111 11111267888887431 1222444443 2
Q ss_pred eeccccc--CCcceEEEccCCCEEEEEcC
Q psy11412 250 IKGRRFT--GSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 250 ~~~~~~~--~~P~~~a~sPDG~~L~Van~ 276 (290)
++|.... .+.=+..|.|..-|||.|++
T Consensus 697 L~gH~~~~~~gVLd~~wHP~qpWLfsAGA 725 (733)
T KOG0650|consen 697 LRGHEKTNDLGVLDTIWHPRQPWLFSAGA 725 (733)
T ss_pred ccCceeecccceEeecccCCCceEEecCC
Confidence 3333221 13445669999999999987
No 239
>KOG0269|consensus
Probab=94.65 E-value=0.11 Score=53.03 Aligned_cols=119 Identities=10% Similarity=0.091 Sum_probs=71.6
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
....|.|+|--..-+++.+.+|.|.+||++.+.+...-- +.+ .+-+-
T Consensus 178 SiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~---~AH------------------------------~GpV~ 224 (839)
T KOG0269|consen 178 SIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKL---TAH------------------------------NGPVL 224 (839)
T ss_pred hhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHh---hcc------------------------------cCceE
Confidence 677899999988888898899999999997654433211 111 02345
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.+-+||++.+|+..+. ++.+.+|+..+.. ...+.++.. .....-+.+-|+-++
T Consensus 225 c~nwhPnr~~lATGGR----------------DK~vkiWd~t~~~-~~~~~tInT----------iapv~rVkWRP~~~~ 277 (839)
T KOG0269|consen 225 CLNWHPNREWLATGGR----------------DKMVKIWDMTDSR-AKPKHTINT----------IAPVGRVKWRPARSY 277 (839)
T ss_pred EEeecCCCceeeecCC----------------CccEEEEeccCCC-ccceeEEee----------cceeeeeeeccCccc
Confidence 5889999988886543 2234445544311 111111110 012334667777666
Q ss_pred EEEEeC--CCCcEEEEEecCC
Q psy11412 194 LYTSNW--MHGDIRQYDIRDT 212 (290)
Q Consensus 194 Lyvs~r--~~~~V~v~Dv~d~ 212 (290)
..+++- .+-+|.||||..|
T Consensus 278 hLAtcsmv~dtsV~VWDvrRP 298 (839)
T KOG0269|consen 278 HLATCSMVVDTSVHVWDVRRP 298 (839)
T ss_pred hhhhhhccccceEEEEeeccc
Confidence 554432 4668999999754
No 240
>KOG0322|consensus
Probab=94.58 E-value=0.051 Score=49.22 Aligned_cols=61 Identities=21% Similarity=0.278 Sum_probs=45.0
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
...++.+-||+|.|++|+| ++.|+||......-+.++ +-+ -++..
T Consensus 253 Gv~gvrIRpD~KIlATAGW-D~RiRVyswrtl~pLAVL---kyH-------------------------------sagvn 297 (323)
T KOG0322|consen 253 GVSGVRIRPDGKILATAGW-DHRIRVYSWRTLNPLAVL---KYH-------------------------------SAGVN 297 (323)
T ss_pred CccceEEccCCcEEeeccc-CCcEEEEEeccCCchhhh---hhh-------------------------------hccee
Confidence 4668899999999999999 789999998763322222 121 05788
Q ss_pred EEEEccCCCEEEEEcC
Q psy11412 114 MFQLSLDGKRIYVSSS 129 (290)
Q Consensus 114 ~vafsPdG~~lYv~ne 129 (290)
.++||||-..++.+++
T Consensus 298 ~vAfspd~~lmAaask 313 (323)
T KOG0322|consen 298 AVAFSPDCELMAAASK 313 (323)
T ss_pred EEEeCCCCchhhhccC
Confidence 8999999776666554
No 241
>KOG0303|consensus
Probab=94.55 E-value=1.5 Score=41.92 Aligned_cols=136 Identities=15% Similarity=0.140 Sum_probs=80.2
Q ss_pred ecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCc
Q psy11412 16 DIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELD 95 (290)
Q Consensus 16 ~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~ 95 (290)
++.+++....+ .-+....++.|+-||.+|.+++- +-+|+|||-.. .+++.+- .+
T Consensus 160 nv~tgeali~l---~hpd~i~S~sfn~dGs~l~Ttck-DKkvRv~dpr~---~~~v~e~-~~------------------ 213 (472)
T KOG0303|consen 160 NVGTGEALITL---DHPDMVYSMSFNRDGSLLCTTCK-DKKVRVIDPRR---GTVVSEG-VA------------------ 213 (472)
T ss_pred eccCCceeeec---CCCCeEEEEEeccCCceeeeecc-cceeEEEcCCC---CcEeeec-cc------------------
Confidence 44444443333 34667889999999999998886 78999998643 4444321 11
Q ss_pred CCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccc
Q psy11412 96 KQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWK 175 (290)
Q Consensus 96 ~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 175 (290)
..|..|.-..|--+|+ ++.+.- +.+ ....+..|+...+..+-.+. .
T Consensus 214 -----------heG~k~~Raifl~~g~-i~tTGf--sr~----------seRq~aLwdp~nl~eP~~~~----------e 259 (472)
T KOG0303|consen 214 -----------HEGAKPARAIFLASGK-IFTTGF--SRM----------SERQIALWDPNNLEEPIALQ----------E 259 (472)
T ss_pred -----------ccCCCcceeEEeccCc-eeeecc--ccc----------cccceeccCcccccCcceeE----------E
Confidence 1245677788888998 555432 111 11123334433321110000 0
Q ss_pred cCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 176 YPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 176 ~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
+-..+++-=--+.||-+.+|...-|+++|+-|.+.+
T Consensus 260 lDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~ 295 (472)
T KOG0303|consen 260 LDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITN 295 (472)
T ss_pred eccCCceEEeeecCCCCEEEEEecCCcceEEEEecC
Confidence 111111111246899999999999999999999965
No 242
>KOG0292|consensus
Probab=94.43 E-value=0.36 Score=50.34 Aligned_cols=114 Identities=13% Similarity=0.106 Sum_probs=73.0
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
.+.+.+|.|.|++- |+|++.++=.|.||+... .+++-++ .|+. .-
T Consensus 51 dGpVRgv~FH~~qp-lFVSGGDDykIkVWnYk~---rrclftL-~GHl------------------------------DY 95 (1202)
T KOG0292|consen 51 DGPVRGVDFHPTQP-LFVSGGDDYKIKVWNYKT---RRCLFTL-LGHL------------------------------DY 95 (1202)
T ss_pred CCccceeeecCCCC-eEEecCCccEEEEEeccc---ceehhhh-cccc------------------------------ce
Confidence 45678999999877 567877788999999864 3444322 2210 46
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCC-ceeEEEEccC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARS-MVTDILISLD 190 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-~~~~i~~SpD 190 (290)
.|.+.||+.-.|+..++. +.++-+|+..+ ++-+.. +.+.+ .+--..|+|-
T Consensus 96 VRt~~FHheyPWIlSASD----------------DQTIrIWNwqs---r~~iav----------ltGHnHYVMcAqFhpt 146 (1202)
T KOG0292|consen 96 VRTVFFHHEYPWILSASD----------------DQTIRIWNWQS---RKCIAV----------LTGHNHYVMCAQFHPT 146 (1202)
T ss_pred eEEeeccCCCceEEEccC----------------CCeEEEEeccC---CceEEE----------EecCceEEEeeccCCc
Confidence 888999999998886543 32333343322 222221 12233 4455679997
Q ss_pred CCEEEEEeCCCCcEEEEEec
Q psy11412 191 DRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~ 210 (290)
...+. |.-.+.+|+||||+
T Consensus 147 EDlIV-SaSLDQTVRVWDis 165 (1202)
T KOG0292|consen 147 EDLIV-SASLDQTVRVWDIS 165 (1202)
T ss_pred cceEE-EecccceEEEEeec
Confidence 76554 44489999999996
No 243
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.40 E-value=0.44 Score=45.24 Aligned_cols=18 Identities=11% Similarity=0.292 Sum_probs=15.0
Q ss_pred CCceEEEEccCCCEEEEEc
Q psy11412 110 GSSQMFQLSLDGKRIYVSS 128 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~n 128 (290)
..|++|+|+++|+ |||+.
T Consensus 14 ~~P~~ia~d~~G~-l~V~e 31 (367)
T TIGR02604 14 RNPIAVCFDERGR-LWVAE 31 (367)
T ss_pred CCCceeeECCCCC-EEEEe
Confidence 5799999999998 66654
No 244
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=94.38 E-value=2.1 Score=41.10 Aligned_cols=135 Identities=16% Similarity=0.194 Sum_probs=72.6
Q ss_pred ceEEEEE--cC-CCCEEEEEeCCCCeEEEEEcCCCCCcee----eeEEeecccccCCCceEEecCCCCcCCCCcceeecc
Q psy11412 34 MVTDILI--SL-DDRYLYTSNWMHGDIRQYDIRDTAHPVL----VGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGR 106 (290)
Q Consensus 34 ~p~~va~--Sp-DGr~Lyva~~~~g~V~v~dv~d~~~~~~----~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 106 (290)
-|+++++ +| +|++-+..+..+|.+..|.+.+.+...+ +.++.+
T Consensus 157 e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~------------------------------ 206 (381)
T PF02333_consen 157 EPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKV------------------------------ 206 (381)
T ss_dssp SEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-------------------------------
T ss_pred cceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecC------------------------------
Confidence 3778886 43 4664333344578999999975444332 332222
Q ss_pred ccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEE
Q psy11412 107 RFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDIL 186 (290)
Q Consensus 107 ~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~ 186 (290)
++.+.+++.+....+||++.|-.+.|-...-++ .+..-..++... + . .+ .....+|+
T Consensus 207 --~sQ~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~---~~~~~~~v~~~~------------g---~-~l--~aDvEGla 263 (381)
T PF02333_consen 207 --GSQPEGCVVDDETGRLYVGEEDVGIWRYDAEPE---GGNDRTLVASAD------------G---D-GL--VADVEGLA 263 (381)
T ss_dssp --SS-EEEEEEETTTTEEEEEETTTEEEEEESSCC---C-S--EEEEEBS------------S---S-SB---S-EEEEE
T ss_pred --CCcceEEEEecccCCEEEecCccEEEEEecCCC---CCCcceeeeccc------------c---c-cc--ccCccceE
Confidence 367899999999999999988555553211111 111000011100 0 0 01 12345566
Q ss_pred E--ccCC-CEEEEEeCCCCcEEEEEecCCCCceEeeEEee
Q psy11412 187 I--SLDD-RYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFL 223 (290)
Q Consensus 187 ~--SpDG-r~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~ 223 (290)
| ..+| .+|.+|+.++++..|||...+ ...++.+.+
T Consensus 264 ly~~~~g~gYLivSsQG~~sf~Vy~r~~~--~~~~g~f~i 301 (381)
T PF02333_consen 264 LYYGSDGKGYLIVSSQGDNSFAVYDREGP--NAYVGSFRI 301 (381)
T ss_dssp EEE-CCC-EEEEEEEGGGTEEEEEESSTT----EEEEEEE
T ss_pred EEecCCCCeEEEEEcCCCCeEEEEecCCC--CcccceEEe
Confidence 6 4566 489999999999999998543 244555544
No 245
>KOG1188|consensus
Probab=94.31 E-value=0.92 Score=42.53 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=26.3
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
..+..+.|+|.---|.+|.--+|-|-+||+..
T Consensus 166 DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~ 197 (376)
T KOG1188|consen 166 DDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKK 197 (376)
T ss_pred CcceeEEecCCCCCeEEeecccceEEeeecCC
Confidence 46788999998777777776899999999953
No 246
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=94.27 E-value=3.7 Score=36.50 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=23.4
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
.....++++|+|+.+.++.-.++.|.+||..
T Consensus 199 ~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~ 229 (466)
T COG2319 199 DPVSSLAFSPDGGLLIASGSSDGTIRLWDLS 229 (466)
T ss_pred CceEEEEEcCCcceEEEEecCCCcEEEEECC
Confidence 3567789999999656664468899999764
No 247
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=94.21 E-value=0.16 Score=47.61 Aligned_cols=75 Identities=19% Similarity=0.288 Sum_probs=46.2
Q ss_pred ceeEEEEccCCCEEEEEeCCC------CcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeeccc
Q psy11412 181 MVTDILISLDDRYLYTSNWMH------GDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRR 254 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~------~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 254 (290)
.+.+|++.+||.+ |+|.++. ..|..++.. .+.+..+++...+. |......+++
T Consensus 86 D~Egi~~~~~g~~-~is~E~~~~~~~~p~I~~~~~~----G~~~~~~~vP~~~~----------------~~~~~~~~~~ 144 (326)
T PF13449_consen 86 DPEGIAVPPDGSF-WISSEGGRTGGIPPRIRRFDLD----GRVIRRFPVPAAFL----------------PDANGTSGRR 144 (326)
T ss_pred ChhHeEEecCCCE-EEEeCCccCCCCCCEEEEECCC----CcccceEccccccc----------------cccCcccccc
Confidence 4557999888876 5666677 788777653 23334333322110 0000013344
Q ss_pred ccCCcceEEEccCCCEEEEEcC
Q psy11412 255 FTGSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 255 ~~~~P~~~a~sPDG~~L~Van~ 276 (290)
...+..+|+++|||++||++.+
T Consensus 145 ~N~G~E~la~~~dG~~l~~~~E 166 (326)
T PF13449_consen 145 NNRGFEGLAVSPDGRTLFAAME 166 (326)
T ss_pred CCCCeEEEEECCCCCEEEEEEC
Confidence 4457999999999999999988
No 248
>KOG1272|consensus
Probab=94.13 E-value=0.18 Score=48.87 Aligned_cols=32 Identities=22% Similarity=0.503 Sum_probs=27.9
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~ 212 (290)
+.+.+|++.++|+++.++. .+..|.|||+...
T Consensus 294 g~V~siAv~~~G~YMaTtG-~Dr~~kIWDlR~~ 325 (545)
T KOG1272|consen 294 GPVSSIAVDRGGRYMATTG-LDRKVKIWDLRNF 325 (545)
T ss_pred CCcceEEECCCCcEEeecc-cccceeEeeeccc
Confidence 4577899999999999998 7999999999653
No 249
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=94.03 E-value=2.5 Score=42.18 Aligned_cols=61 Identities=20% Similarity=0.057 Sum_probs=46.1
Q ss_pred CCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCC
Q psy11412 179 RSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 258 (290)
Q Consensus 179 ~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (290)
+..+.-.++||+...|..++ .|++|.+||.... ....+...- -
T Consensus 259 ~s~v~~ca~sp~E~kLvlGC-~DgSiiLyD~~~~----~t~~~ka~~--------------------------------~ 301 (545)
T PF11768_consen 259 PSQVICCARSPSEDKLVLGC-EDGSIILYDTTRG----VTLLAKAEF--------------------------------I 301 (545)
T ss_pred CCcceEEecCcccceEEEEe-cCCeEEEEEcCCC----eeeeeeecc--------------------------------c
Confidence 34566789999999999999 7999999998421 111111111 5
Q ss_pred cceEEEccCCCEEEEEcC
Q psy11412 259 SQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 259 P~~~a~sPDG~~L~Van~ 276 (290)
|..+++.|||..+.|+|+
T Consensus 302 P~~iaWHp~gai~~V~s~ 319 (545)
T PF11768_consen 302 PTLIAWHPDGAIFVVGSE 319 (545)
T ss_pred ceEEEEcCCCcEEEEEcC
Confidence 889999999999999987
No 250
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=93.92 E-value=0.1 Score=39.38 Aligned_cols=31 Identities=32% Similarity=0.518 Sum_probs=27.1
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
..|.+|.+|||+++|||+.-..++|.+|.+.
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 3567899999999999999888999999764
No 251
>KOG1538|consensus
Probab=93.87 E-value=1.2 Score=45.26 Aligned_cols=133 Identities=20% Similarity=0.231 Sum_probs=73.6
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
..+.++|-|||..|.++. ++.+.+||..+++....+. .+ -..+.
T Consensus 14 ci~d~afkPDGsqL~lAA--g~rlliyD~ndG~llqtLK---gH-------------------------------KDtVy 57 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA--GSRLLVYDTSDGTLLQPLK---GH-------------------------------KDTVY 57 (1081)
T ss_pred chheeEECCCCceEEEec--CCEEEEEeCCCcccccccc---cc-------------------------------cceEE
Confidence 567899999999999986 4799999998854333221 11 04567
Q ss_pred EEEEccCCCEEEEEcCCCC--Ccceee--cccccCCCceeecceeeeeeec-ccccccCccccCccccCC--------CC
Q psy11412 114 MFQLSLDGKRIYVSSSLFS--PWDKEI--YPDLVKTDAAFGSDEIMEFIQR-NEMRSMPLSSLGSWKYPA--------RS 180 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~--~~d~~~--~~~~~~~g~~~~~~~~~~~~~~-~~i~~~p~~~~~~~~~~~--------~~ 180 (290)
.+++|.||++++..+.... .|.... ...++ .+. .++-..|.+- +.+++.....+.-|.-.. ..
T Consensus 58 cVAys~dGkrFASG~aDK~VI~W~~klEG~LkYS-H~D---~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~ 133 (1081)
T KOG1538|consen 58 CVAYAKDGKRFASGSADKSVIIWTSKLEGILKYS-HND---AIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSS 133 (1081)
T ss_pred EEEEccCCceeccCCCceeEEEecccccceeeec-cCC---eeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhhe
Confidence 7999999998775433111 111100 00000 011 1222222111 122222222233442111 02
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEE
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQY 207 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~ 207 (290)
..-..+...||.+|...- ++++|++=
T Consensus 134 R~~~CsWtnDGqylalG~-~nGTIsiR 159 (1081)
T KOG1538|consen 134 RIICCSWTNDGQYLALGM-FNGTISIR 159 (1081)
T ss_pred eEEEeeecCCCcEEEEec-cCceEEee
Confidence 355678899999998877 78999865
No 252
>KOG1523|consensus
Probab=93.82 E-value=1.4 Score=40.99 Aligned_cols=178 Identities=13% Similarity=0.102 Sum_probs=97.2
Q ss_pred eecCCCc-eeEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccc
Q psy11412 2 YRQSDGT-YKADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKI 80 (290)
Q Consensus 2 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~ 80 (290)
|+.++.+ |+...++.--++ .+.+|..+|-..+|. ++..+..-.||...+.+.=+..-.+
T Consensus 37 y~~~~~~~w~~~htls~Hd~-------------~vtgvdWap~snrIv-tcs~drnayVw~~~~~~~WkptlvL------ 96 (361)
T KOG1523|consen 37 YSMLGADLWEPAHTLSEHDK-------------IVTGVDWAPKSNRIV-TCSHDRNAYVWTQPSGGTWKPTLVL------ 96 (361)
T ss_pred EEecCCCCceeceehhhhCc-------------ceeEEeecCCCCcee-EccCCCCccccccCCCCeeccceeE------
Confidence 5666666 777665544443 356678888887875 4445677788887432221111000
Q ss_pred cCCCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeec
Q psy11412 81 QSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQR 160 (290)
Q Consensus 81 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~ 160 (290)
.+.......+..+|.+..++|.+ ....+++++|.. ..++ -+.
T Consensus 97 -------------------------lRiNrAAt~V~WsP~enkFAVgS-gar~isVcy~E~---ENdW----WVs----- 138 (361)
T KOG1523|consen 97 -------------------------LRINRAATCVKWSPKENKFAVGS-GARLISVCYYEQ---ENDW----WVS----- 138 (361)
T ss_pred -------------------------EEeccceeeEeecCcCceEEecc-CccEEEEEEEec---ccce----ehh-----
Confidence 01123456789999998877644 345667766643 1112 110
Q ss_pred ccccccCccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEec-----C-CCCceEeeEEeeCceecCCCceE
Q psy11412 161 NEMRSMPLSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIR-----D-TAHPVLVGQIFLGGKIQSDSGVT 234 (290)
Q Consensus 161 ~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~-----d-~~~~~~v~~i~~Gg~~~~~~~v~ 234 (290)
+.++ .|-......+..+|++=.|.+.. .|...+||..- . |+..-.-..+|-|..
T Consensus 139 Khik-----------kPirStv~sldWhpnnVLlaaGs-~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~l-------- 198 (361)
T KOG1523|consen 139 KHIK-----------KPIRSTVTSLDWHPNNVLLAAGS-TDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQL-------- 198 (361)
T ss_pred hhhC-----------CccccceeeeeccCCcceecccc-cCcceeEEEEeeeccccCCCCCCCccCCcHHHH--------
Confidence 1111 01113345677888887777666 67777777641 1 111111112222211
Q ss_pred EecCCCCCCCCCcceeecc-cccCCcceEEEccCCCEEE
Q psy11412 235 VIDDPELDKQPDPVIIKGR-RFTGSSQMFQLSLDGKRIY 272 (290)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~-~~~~~P~~~a~sPDG~~L~ 272 (290)
.... +.+|+.+.+.|+|+|.+|+
T Consensus 199 ---------------m~E~~~~ggwvh~v~fs~sG~~la 222 (361)
T KOG1523|consen 199 ---------------MSEASSSGGWVHGVLFSPSGNRLA 222 (361)
T ss_pred ---------------HHhhccCCCceeeeEeCCCCCEee
Confidence 1111 3467899999999999875
No 253
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=93.72 E-value=4.7 Score=35.80 Aligned_cols=31 Identities=29% Similarity=0.512 Sum_probs=24.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
....++++|++++++++...++.+.+|++..
T Consensus 157 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (466)
T COG2319 157 SVTSLAFSPDGKLLASGSSLDGTIKLWDLRT 187 (466)
T ss_pred cEEEEEECCCCCEEEecCCCCCceEEEEcCC
Confidence 4558999999997766632389999999865
No 254
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=93.68 E-value=0.15 Score=29.92 Aligned_cols=26 Identities=8% Similarity=0.250 Sum_probs=21.4
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEE
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQY 207 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~ 207 (290)
.|.+|+++++| .+|+++++++.|.+|
T Consensus 3 ~P~gvav~~~g-~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 3 YPHGVAVDSDG-NIYVADSGNHRVQVF 28 (28)
T ss_dssp SEEEEEEETTS-EEEEEECCCTEEEEE
T ss_pred CCcEEEEeCCC-CEEEEECCCCEEEEC
Confidence 46789999777 569999999988875
No 255
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=93.63 E-value=0.27 Score=44.86 Aligned_cols=27 Identities=26% Similarity=0.325 Sum_probs=24.2
Q ss_pred eEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 183 TDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 183 ~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
+-+++|||+..|+.+. ..++|.+||+.
T Consensus 47 Rkl~WSpD~tlLa~a~-S~G~i~vfdl~ 73 (282)
T PF15492_consen 47 RKLAWSPDCTLLAYAE-STGTIRVFDLM 73 (282)
T ss_pred eEEEECCCCcEEEEEc-CCCeEEEEecc
Confidence 5599999999999887 78999999985
No 256
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=93.59 E-value=4.6 Score=37.97 Aligned_cols=48 Identities=17% Similarity=0.243 Sum_probs=32.6
Q ss_pred EEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 12 DKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
-.+.|++.+++.... .-........+||||++++-.. ++.|.+++..+
T Consensus 25 y~i~d~~~~~~~~l~---~~~~~~~~~~~sP~g~~~~~v~--~~nly~~~~~~ 72 (353)
T PF00930_consen 25 YYIYDIETGEITPLT---PPPPKLQDAKWSPDGKYIAFVR--DNNLYLRDLAT 72 (353)
T ss_dssp EEEEETTTTEEEESS----EETTBSEEEE-SSSTEEEEEE--TTEEEEESSTT
T ss_pred EEEEecCCCceEECc---CCccccccceeecCCCeeEEEe--cCceEEEECCC
Confidence 356788877655543 1134566789999999998775 46899998754
No 257
>PRK13616 lipoprotein LpqB; Provisional
Probab=93.57 E-value=0.48 Score=48.14 Aligned_cols=19 Identities=37% Similarity=0.377 Sum_probs=16.1
Q ss_pred CCcceEEEccCCCEEEEEc
Q psy11412 257 GSSQMFQLSLDGKRIYVSS 275 (290)
Q Consensus 257 ~~P~~~a~sPDG~~L~Van 275 (290)
+.+..+.+||||++|++..
T Consensus 448 g~Issl~wSpDG~RiA~i~ 466 (591)
T PRK13616 448 GPISELQLSRDGVRAAMII 466 (591)
T ss_pred CCcCeEEECCCCCEEEEEE
Confidence 3688999999999998754
No 258
>KOG0647|consensus
Probab=93.41 E-value=0.16 Score=46.73 Aligned_cols=31 Identities=16% Similarity=0.564 Sum_probs=23.6
Q ss_pred ceeEEEEccCCCEEE-EEeCCCCcEEEEEecCC
Q psy11412 181 MVTDILISLDDRYLY-TSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 181 ~~~~i~~SpDGr~Ly-vs~r~~~~V~v~Dv~d~ 212 (290)
...+|+|||.-..|. ++.| +++|++|+|.+.
T Consensus 29 sIS~l~FSP~~~~~~~A~SW-D~tVR~wevq~~ 60 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAGSW-DGTVRIWEVQNS 60 (347)
T ss_pred chheeEeccccCceEEeccc-CCceEEEEEecC
Confidence 567899999544444 6665 889999999763
No 259
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=93.33 E-value=1.9 Score=42.50 Aligned_cols=116 Identities=15% Similarity=0.154 Sum_probs=68.5
Q ss_pred CCCceEEEEEcCCCCEEEEEe-CCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccC
Q psy11412 31 VPAMVTDILISLDDRYLYTSN-WMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFT 109 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~-~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g 109 (290)
+.+-++..+++|+++...+.. +..-++.++|+.. +.+.. . | .
T Consensus 273 ~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~--Nl~~~-----~--------------------P----------e 315 (561)
T COG5354 273 LKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRG--NLRFY-----F--------------------P----------E 315 (561)
T ss_pred ccccceeeeecccCCceeEEecccccceeeccccc--ceEEe-----c--------------------C----------C
Confidence 345788999999988777665 7778899998842 22211 0 0 0
Q ss_pred CCceEEEEccCCCEEEEEcC--CCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEE
Q psy11412 110 GSSQMFQLSLDGKRIYVSSS--LFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILI 187 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~ne--l~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~ 187 (290)
..-..+.|||.++++.++.- +.+.+ .+.+...+-.+. +.+ .+....-+.+
T Consensus 316 ~~rNT~~fsp~~r~il~agF~nl~gni------------------~i~~~~~rf~~~----~~~------~~~n~s~~~w 367 (561)
T COG5354 316 QKRNTIFFSPHERYILFAGFDNLQGNI------------------EIFDPAGRFKVA----GAF------NGLNTSYCDW 367 (561)
T ss_pred cccccccccCcccEEEEecCCccccce------------------EEeccCCceEEE----EEe------ecCCceEeec
Confidence 12234889999999888542 21211 111110011111 001 1112334679
Q ss_pred ccCCCEEEEEe-----CCCCcEEEEEecC
Q psy11412 188 SLDDRYLYTSN-----WMHGDIRQYDIRD 211 (290)
Q Consensus 188 SpDGr~Lyvs~-----r~~~~V~v~Dv~d 211 (290)
||||.|++++. |-|+.|.+|||.-
T Consensus 368 spd~qF~~~~~ts~k~~~Dn~i~l~~v~g 396 (561)
T COG5354 368 SPDGQFYDTDTTSEKLRVDNSIKLWDVYG 396 (561)
T ss_pred cCCceEEEecCCCcccccCcceEEEEecC
Confidence 99999999754 3478999999963
No 260
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=93.30 E-value=0.98 Score=41.51 Aligned_cols=131 Identities=15% Similarity=0.087 Sum_probs=73.3
Q ss_pred EEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCC
Q psy11412 14 VIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPE 93 (290)
Q Consensus 14 ~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~ 93 (290)
-+|-.+++|..+. ..-+++|++|.+.|||..- +++.+. .|. +++ +.+.+... ..+..
T Consensus 87 hLdP~tGev~~yp--Lg~Ga~Phgiv~gpdg~~W-itd~~~-aI~--R~d-pkt~evt~-f~lp~--------------- 143 (353)
T COG4257 87 HLDPATGEVETYP--LGSGASPHGIVVGPDGSAW-ITDTGL-AIG--RLD-PKTLEVTR-FPLPL--------------- 143 (353)
T ss_pred ecCCCCCceEEEe--cCCCCCCceEEECCCCCee-EecCcc-eeE--Eec-CcccceEE-eeccc---------------
Confidence 4566677777774 2246699999999999754 455422 343 442 22233321 11110
Q ss_pred CcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCc
Q psy11412 94 LDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGS 173 (290)
Q Consensus 94 ~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~ 173 (290)
...-.+-+..+|+++|+.-|+.... +| | . +|.. +..+. .
T Consensus 144 ------------~~a~~nlet~vfD~~G~lWFt~q~G-------~y------G-r---LdPa----~~~i~--------v 182 (353)
T COG4257 144 ------------EHADANLETAVFDPWGNLWFTGQIG-------AY------G-R---LDPA----RNVIS--------V 182 (353)
T ss_pred ------------ccCCCcccceeeCCCccEEEeeccc-------cc------e-e---cCcc----cCcee--------e
Confidence 0011456678999999977764321 00 1 1 1111 11111 2
Q ss_pred cccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEe
Q psy11412 174 WKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDI 209 (290)
Q Consensus 174 ~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv 209 (290)
|..|.+..+++|+..|||..-|++- ..|-|..+|-
T Consensus 183 fpaPqG~gpyGi~atpdGsvwyasl-agnaiaridp 217 (353)
T COG4257 183 FPAPQGGGPYGICATPDGSVWYASL-AGNAIARIDP 217 (353)
T ss_pred eccCCCCCCcceEECCCCcEEEEec-cccceEEccc
Confidence 2234456789999999999877766 4566766655
No 261
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=93.20 E-value=4.7 Score=36.40 Aligned_cols=126 Identities=12% Similarity=0.143 Sum_probs=65.1
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
.-+.+|+++||.++|++.....+.|..++.+ .+++..+...|. +-+
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~~----G~vlr~i~l~g~------------------------------~D~ 67 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQDEPGEIYELSLD----GKVLRRIPLDGF------------------------------GDY 67 (248)
T ss_dssp S-EEEEEEETTTTEEEEEETTTTEEEEEETT------EEEEEE-SS-------------------------------SSE
T ss_pred CCccccEEcCCCCeEEEEECCCCEEEEEcCC----CCEEEEEeCCCC------------------------------CCc
Confidence 3589999999999888887778888777652 456776766531 468
Q ss_pred eEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCC
Q psy11412 113 QMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDR 192 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr 192 (290)
.+|++--+|+ ++++.|-.+.+..+..+. ++.. ++..+ ...+.. +.......+-.+|+++|.+.
T Consensus 68 EgI~y~g~~~-~vl~~Er~~~L~~~~~~~---~~~~---~~~~~------~~~~~l----~~~~~~N~G~EGla~D~~~~ 130 (248)
T PF06977_consen 68 EGITYLGNGR-YVLSEERDQRLYIFTIDD---DTTS---LDRAD------VQKISL----GFPNKGNKGFEGLAYDPKTN 130 (248)
T ss_dssp EEEEE-STTE-EEEEETTTTEEEEEEE-------TT-----EEE------EEEEE-------S---SS--EEEEEETTTT
T ss_pred eeEEEECCCE-EEEEEcCCCcEEEEEEec---cccc---cchhh------ceEEec----ccccCCCcceEEEEEcCCCC
Confidence 8899987775 344455222221111110 0100 01111 000000 10001123567899999999
Q ss_pred EEEEEeCCCCcEEEEEec
Q psy11412 193 YLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~ 210 (290)
.||++.+ ..-..+|.+.
T Consensus 131 ~L~v~kE-~~P~~l~~~~ 147 (248)
T PF06977_consen 131 RLFVAKE-RKPKRLYEVN 147 (248)
T ss_dssp EEEEEEE-SSSEEEEEEE
T ss_pred EEEEEeC-CCChhhEEEc
Confidence 9998873 4445556553
No 262
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=93.19 E-value=0.46 Score=47.22 Aligned_cols=64 Identities=20% Similarity=0.114 Sum_probs=49.2
Q ss_pred CCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeecccc
Q psy11412 29 DKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRF 108 (290)
Q Consensus 29 ~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 108 (290)
+++++.+...+++|+..+|..++. +|+|.+||.... .... ...
T Consensus 256 ipL~s~v~~ca~sp~E~kLvlGC~-DgSiiLyD~~~~--~t~~--~ka-------------------------------- 298 (545)
T PF11768_consen 256 IPLPSQVICCARSPSEDKLVLGCE-DGSIILYDTTRG--VTLL--AKA-------------------------------- 298 (545)
T ss_pred EecCCcceEEecCcccceEEEEec-CCeEEEEEcCCC--eeee--eee--------------------------------
Confidence 357778999999999999998885 899999997532 1111 111
Q ss_pred CCCceEEEEccCCCEEEEEcC
Q psy11412 109 TGSSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 109 g~gPr~vafsPdG~~lYv~ne 129 (290)
.--|.+++.||+|..+.|.|+
T Consensus 299 ~~~P~~iaWHp~gai~~V~s~ 319 (545)
T PF11768_consen 299 EFIPTLIAWHPDGAIFVVGSE 319 (545)
T ss_pred cccceEEEEcCCCcEEEEEcC
Confidence 136889999999999999887
No 263
>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
Probab=93.08 E-value=9 Score=37.08 Aligned_cols=20 Identities=15% Similarity=0.338 Sum_probs=17.8
Q ss_pred CCcceEEEccCCCEEEEEcC
Q psy11412 257 GSSQMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 257 ~~P~~~a~sPDG~~L~Van~ 276 (290)
+.|++++..|||-.|+..++
T Consensus 367 gR~~dV~v~~DGallv~~D~ 386 (399)
T COG2133 367 GRPRDVAVAPDGALLVLTDQ 386 (399)
T ss_pred CcccceEECCCCeEEEeecC
Confidence 47999999999999988876
No 264
>KOG0308|consensus
Probab=93.06 E-value=1.3 Score=44.72 Aligned_cols=117 Identities=18% Similarity=0.233 Sum_probs=74.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
..+++|-.+.| +++|++...+.|++||-... +.+-.+. |+ ...+|
T Consensus 173 siYSLA~N~t~-t~ivsGgtek~lr~wDprt~---~kimkLr-GH------------------------------TdNVr 217 (735)
T KOG0308|consen 173 SIYSLAMNQTG-TIIVSGGTEKDLRLWDPRTC---KKIMKLR-GH------------------------------TDNVR 217 (735)
T ss_pred ceeeeecCCcc-eEEEecCcccceEEeccccc---cceeeee-cc------------------------------ccceE
Confidence 57889999988 66677777899999996542 2221111 21 15789
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
-+.+++||+++..++. +| ++..|++ -+++-+.+... ....+-++..+|+=.+
T Consensus 218 ~ll~~dDGt~~ls~sS---------------Dg-tIrlWdL---gqQrCl~T~~v---------H~e~VWaL~~~~sf~~ 269 (735)
T KOG0308|consen 218 VLLVNDDGTRLLSASS---------------DG-TIRLWDL---GQQRCLATYIV---------HKEGVWALQSSPSFTH 269 (735)
T ss_pred EEEEcCCCCeEeecCC---------------Cc-eEEeeec---cccceeeeEEe---------ccCceEEEeeCCCcce
Confidence 9999999999998765 22 3333332 22222332111 0112445778899999
Q ss_pred EEEEeCCCCcEEEEEecCCCC
Q psy11412 194 LYTSNWMHGDIRQYDIRDTAH 214 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~d~~~ 214 (290)
+|.++| ++.|..=|+.++..
T Consensus 270 vYsG~r-d~~i~~Tdl~n~~~ 289 (735)
T KOG0308|consen 270 VYSGGR-DGNIYRTDLRNPAK 289 (735)
T ss_pred EEecCC-CCcEEecccCCchh
Confidence 999995 67788888876543
No 265
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=93.05 E-value=0.43 Score=36.27 Aligned_cols=18 Identities=22% Similarity=0.135 Sum_probs=15.6
Q ss_pred CcceEEEccCCCEEEEEc
Q psy11412 258 SSQMFQLSLDGKRIYVSS 275 (290)
Q Consensus 258 ~P~~~a~sPDG~~L~Van 275 (290)
.|+++++|||+..|+||-
T Consensus 58 fpNGVals~d~~~vlv~E 75 (89)
T PF03088_consen 58 FPNGVALSPDESFVLVAE 75 (89)
T ss_dssp SEEEEEE-TTSSEEEEEE
T ss_pred ccCeEEEcCCCCEEEEEe
Confidence 699999999999999983
No 266
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=92.97 E-value=1.9 Score=43.24 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=27.6
Q ss_pred CCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeec
Q psy11412 42 LDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 77 (290)
Q Consensus 42 pDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g 77 (290)
-||++||+.+ +++|.++|..++..++.++.+...
T Consensus 20 TDG~yIY~v~--~~~l~Iida~p~~~~~~~s~I~~~ 53 (521)
T PF09826_consen 20 TDGEYIYVVS--GGRLYIIDAYPAEEMKVVSRIDLD 53 (521)
T ss_pred ECCCEEEEEe--CCEEEEEECCCchhceEEEEEecC
Confidence 3999999998 589999999776677787776554
No 267
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=92.92 E-value=0.66 Score=35.23 Aligned_cols=19 Identities=21% Similarity=0.058 Sum_probs=15.8
Q ss_pred CCceEEEEccCCCEEEEEc
Q psy11412 110 GSSQMFQLSLDGKRIYVSS 128 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~n 128 (290)
..|.+|++|+|++.+.|+.
T Consensus 57 ~fpNGVals~d~~~vlv~E 75 (89)
T PF03088_consen 57 YFPNGVALSPDESFVLVAE 75 (89)
T ss_dssp SSEEEEEE-TTSSEEEEEE
T ss_pred CccCeEEEcCCCCEEEEEe
Confidence 4799999999999999864
No 268
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=92.74 E-value=2.7 Score=42.10 Aligned_cols=20 Identities=20% Similarity=0.109 Sum_probs=16.7
Q ss_pred ceEEEEEcCCCCEEEEEeCC
Q psy11412 34 MVTDILISLDDRYLYTSNWM 53 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~ 53 (290)
.|..+.++|....+|++...
T Consensus 351 RpEgi~~~p~~g~vY~a~T~ 370 (524)
T PF05787_consen 351 RPEGITVNPDDGEVYFALTN 370 (524)
T ss_pred CccCeeEeCCCCEEEEEEec
Confidence 57789999999999998643
No 269
>KOG1408|consensus
Probab=92.71 E-value=1.4 Score=45.23 Aligned_cols=116 Identities=18% Similarity=0.178 Sum_probs=74.4
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.-+.+++.|.-+++++++- +..|++|+++.+ +.....+.. . .+ -+.+-
T Consensus 598 TlYDm~Vdp~~k~v~t~cQ-Drnirif~i~sg---Kq~k~FKgs-----~--------------~~---------eG~lI 645 (1080)
T KOG1408|consen 598 TLYDMAVDPTSKLVVTVCQ-DRNIRIFDIESG---KQVKSFKGS-----R--------------DH---------EGDLI 645 (1080)
T ss_pred eEEEeeeCCCcceEEEEec-ccceEEEecccc---ceeeeeccc-----c--------------cC---------CCceE
Confidence 4568999999999988885 789999999763 222222111 0 00 13456
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
-+.+.|.|-+++.+.. +.++..+ ||....-+++.- | ....+.++.|++|=|+
T Consensus 646 Kv~lDPSgiY~atScs----------------dktl~~~---Df~sgEcvA~m~-----G----HsE~VTG~kF~nDCkH 697 (1080)
T KOG1408|consen 646 KVILDPSGIYLATSCS----------------DKTLCFV---DFVSGECVAQMT-----G----HSEAVTGVKFLNDCKH 697 (1080)
T ss_pred EEEECCCccEEEEeec----------------CCceEEE---Eeccchhhhhhc-----C----cchheeeeeecccchh
Confidence 6889999987776544 2233322 322222232211 1 1245778999999999
Q ss_pred EEEEeCCCCcEEEEEec
Q psy11412 194 LYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~ 210 (290)
|.... +++-|.||.+.
T Consensus 698 lISvs-gDgCIFvW~lp 713 (1080)
T KOG1408|consen 698 LISVS-GDGCIFVWKLP 713 (1080)
T ss_pred heeec-CCceEEEEECc
Confidence 98666 89999999984
No 270
>KOG2106|consensus
Probab=92.40 E-value=0.67 Score=45.53 Aligned_cols=62 Identities=13% Similarity=0.185 Sum_probs=43.2
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
..-...+.+||||.+|+++.- ++.|.+|.++..++. ...+ + .--|+.
T Consensus 447 ~~~ls~v~ysp~G~~lAvgs~-d~~iyiy~Vs~~g~~--y~r~--~----------------------------k~~gs~ 493 (626)
T KOG2106|consen 447 NEQLSVVRYSPDGAFLAVGSH-DNHIYIYRVSANGRK--YSRV--G----------------------------KCSGSP 493 (626)
T ss_pred CCceEEEEEcCCCCEEEEecC-CCeEEEEEECCCCcE--EEEe--e----------------------------eecCce
Confidence 334557899999999999874 899999999764422 1111 1 001245
Q ss_pred ceEEEEccCCCEEEE
Q psy11412 112 SQMFQLSLDGKRIYV 126 (290)
Q Consensus 112 Pr~vafsPdG~~lYv 126 (290)
..|+-||+|+++|-.
T Consensus 494 ithLDwS~Ds~~~~~ 508 (626)
T KOG2106|consen 494 ITHLDWSSDSQFLVS 508 (626)
T ss_pred eEEeeecCCCceEEe
Confidence 688999999997764
No 271
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=92.40 E-value=2.4 Score=41.63 Aligned_cols=48 Identities=19% Similarity=0.163 Sum_probs=32.7
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCE
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKR 270 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~ 270 (290)
|+.|.+.. ++.|.+||+.. .+.+.++.+.. ++.+.+|+||.+
T Consensus 117 G~LL~~~~--~~~i~~yDw~~---~~~i~~i~v~~---------------------------------vk~V~Ws~~g~~ 158 (443)
T PF04053_consen 117 GNLLGVKS--SDFICFYDWET---GKLIRRIDVSA---------------------------------VKYVIWSDDGEL 158 (443)
T ss_dssp SSSEEEEE--TTEEEEE-TTT-----EEEEESS-E----------------------------------EEEEE-TTSSE
T ss_pred CcEEEEEC--CCCEEEEEhhH---cceeeEEecCC---------------------------------CcEEEEECCCCE
Confidence 99998886 45799999863 56777775421 478999999999
Q ss_pred EEEEcC
Q psy11412 271 IYVSSS 276 (290)
Q Consensus 271 L~Van~ 276 (290)
++.++.
T Consensus 159 val~t~ 164 (443)
T PF04053_consen 159 VALVTK 164 (443)
T ss_dssp EEEE-S
T ss_pred EEEEeC
Confidence 988865
No 272
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=92.40 E-value=0.5 Score=27.63 Aligned_cols=26 Identities=8% Similarity=0.250 Sum_probs=21.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEE
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQY 60 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~ 60 (290)
.|++|+++++| .|||++.+...|.+|
T Consensus 3 ~P~gvav~~~g-~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 3 YPHGVAVDSDG-NIYVADSGNHRVQVF 28 (28)
T ss_dssp SEEEEEEETTS-EEEEEECCCTEEEEE
T ss_pred CCcEEEEeCCC-CEEEEECCCCEEEEC
Confidence 69999999655 578999988888765
No 273
>KOG1332|consensus
Probab=92.36 E-value=8.3 Score=34.91 Aligned_cols=40 Identities=18% Similarity=0.461 Sum_probs=28.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEE
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQI 74 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i 74 (290)
..|++.++==|++|++++ .+++|++|.+...+...++.++
T Consensus 13 ~IHda~lDyygkrlATcs-SD~tVkIf~v~~n~~s~ll~~L 52 (299)
T KOG1332|consen 13 MIHDAQLDYYGKRLATCS-SDGTVKIFEVRNNGQSKLLAEL 52 (299)
T ss_pred hhhHhhhhhhcceeeeec-CCccEEEEEEcCCCCceeeeEe
Confidence 456666666699998776 4899999999875543555544
No 274
>KOG2445|consensus
Probab=92.25 E-value=5.1 Score=37.30 Aligned_cols=43 Identities=9% Similarity=0.122 Sum_probs=32.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC-CCCceeeeEEeec
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRD-TAHPVLVGQIFLG 77 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d-~~~~~~~~~i~~g 77 (290)
..+.+.|++-||+++++. .+++|.|||.++ .++=.+...+..+
T Consensus 15 lihdVs~D~~GRRmAtCS-sDq~vkI~d~~~~s~~W~~Ts~Wrah 58 (361)
T KOG2445|consen 15 LIHDVSFDFYGRRMATCS-SDQTVKIWDSTSDSGTWSCTSSWRAH 58 (361)
T ss_pred eeeeeeecccCceeeecc-CCCcEEEEeccCCCCceEEeeeEEec
Confidence 588999999999998665 589999999754 3444566666665
No 275
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=92.08 E-value=5.5 Score=42.75 Aligned_cols=118 Identities=18% Similarity=0.176 Sum_probs=67.6
Q ss_pred ceEEEEEcCCCCEEEEEeC--CCC---eEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeecccc
Q psy11412 34 MVTDILISLDDRYLYTSNW--MHG---DIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRF 108 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~--~~g---~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 108 (290)
.-..|+.--||.|.+|+.. ..| .++||+-+ +.+..+.+ ..
T Consensus 211 ~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re--G~L~stSE-~v-------------------------------- 255 (928)
T PF04762_consen 211 GRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE--GELQSTSE-PV-------------------------------- 255 (928)
T ss_pred CceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC--ceEEeccc-cC--------------------------------
Confidence 5567889999999999876 333 67777642 22221111 00
Q ss_pred CCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEc
Q psy11412 109 TGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILIS 188 (290)
Q Consensus 109 g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~S 188 (290)
-+--..+++-|.|.+++.+....+..++.+|.. +|-.-. .|. + +. -+.......+..+
T Consensus 256 ~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfEr---NGLrhg-----eF~----l---~~-------~~~~~~v~~l~Wn 313 (928)
T PF04762_consen 256 DGLEGALSWRPSGNLIASSQRLPDRHDVVFFER---NGLRHG-----EFT----L---RF-------DPEEEKVIELAWN 313 (928)
T ss_pred CCccCCccCCCCCCEEEEEEEcCCCcEEEEEec---CCcEee-----eEe----c---CC-------CCCCceeeEEEEC
Confidence 012234889999999998887666677766643 221100 000 0 00 0011245668888
Q ss_pred cCCCEEEEEeCCCCcEEEEEec
Q psy11412 189 LDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 189 pDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
+|+..|++-. ++.|.+|-..
T Consensus 314 ~ds~iLAv~~--~~~vqLWt~~ 333 (928)
T PF04762_consen 314 SDSEILAVWL--EDRVQLWTRS 333 (928)
T ss_pred CCCCEEEEEe--cCCceEEEee
Confidence 8888887754 4457777553
No 276
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.66 E-value=1.8 Score=40.05 Aligned_cols=112 Identities=12% Similarity=0.184 Sum_probs=66.1
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
..-.++++|+-++||++..- ...+..++. ....++++|...+ ..+.+|...-+
T Consensus 87 nvS~LTynp~~rtLFav~n~---------------p~~iVElt~----~GdlirtiPL~g~--------~DpE~Ieyig~ 139 (316)
T COG3204 87 NVSSLTYNPDTRTLFAVTNK---------------PAAIVELTK----EGDLIRTIPLTGF--------SDPETIEYIGG 139 (316)
T ss_pred cccceeeCCCcceEEEecCC---------------CceEEEEec----CCceEEEeccccc--------CChhHeEEecC
Confidence 46679999999999987541 111211111 1234555554322 23556888889
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCceEee--EEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCC
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRDTAHPVLVG--QIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDG 268 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~--~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG 268 (290)
|+|+.+-. .+.++.++.++.......+. .++.|.. ++. ..+=.++|.+|..
T Consensus 140 n~fvi~dE-R~~~l~~~~vd~~t~~~~~~~~~i~L~~~------------------~k~--------N~GfEGlA~d~~~ 192 (316)
T COG3204 140 NQFVIVDE-RDRALYLFTVDADTTVISAKVQKIPLGTT------------------NKK--------NKGFEGLAWDPVD 192 (316)
T ss_pred CEEEEEeh-hcceEEEEEEcCCccEEeccceEEecccc------------------CCC--------CcCceeeecCCCC
Confidence 99865554 57889999985322211111 3444431 000 0145789999999
Q ss_pred CEEEEEcC
Q psy11412 269 KRIYVSSS 276 (290)
Q Consensus 269 ~~L~Van~ 276 (290)
++||+|-+
T Consensus 193 ~~l~~aKE 200 (316)
T COG3204 193 HRLFVAKE 200 (316)
T ss_pred ceEEEEEc
Confidence 99999854
No 277
>KOG0267|consensus
Probab=91.41 E-value=0.24 Score=50.30 Aligned_cols=102 Identities=18% Similarity=0.308 Sum_probs=62.3
Q ss_pred eeEEEEccCCCEEEEEeCCCCcEEEEEecCCC-------C---ceEeeEEeeCcee---cCCCceEEecCCCCCCCCCcc
Q psy11412 182 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTA-------H---PVLVGQIFLGGKI---QSDSGVTVIDDPELDKQPDPV 248 (290)
Q Consensus 182 ~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~-------~---~~~v~~i~~Gg~~---~~~~~v~~~~~~~~~~~~~~~ 248 (290)
...+.|+++.+.|.++. .+++|.+||+...- + ...+..-|.|.-+ +.|.+..+||.+.+.-..
T Consensus 73 IeSl~f~~~E~Llaags-asgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~--- 148 (825)
T KOG0267|consen 73 IESLTFDTSERLLAAGS-ASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSH--- 148 (825)
T ss_pred ceeeecCcchhhhcccc-cCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCcee---
Confidence 45688999988777665 67899999995311 0 0112222222211 455667888865432111
Q ss_pred eeecccccCCcceEEEccCCCEEEEEcC--CCCCCCc---ccCCCC
Q psy11412 249 IIKGRRFTGSSQMFQLSLDGKRIYVSSS--LFSPWDK---EIYPDL 289 (290)
Q Consensus 249 ~~~~~~~~~~P~~~a~sPDG~~L~Van~--~~~~~~~---~~~~~~ 289 (290)
.++|. .+..+-+.|+|||+++...++ ...-||. +|-+++
T Consensus 149 ~~~s~--~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef 192 (825)
T KOG0267|consen 149 TYKSH--TRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEF 192 (825)
T ss_pred eecCC--cceeEEEeecCCCceeeccCCcceeeeeccccccccccc
Confidence 11221 124688899999999999987 7778887 665543
No 278
>KOG2314|consensus
Probab=91.39 E-value=2.1 Score=42.65 Aligned_cols=116 Identities=20% Similarity=0.152 Sum_probs=66.1
Q ss_pred EEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceEE
Q psy11412 36 TDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMF 115 (290)
Q Consensus 36 ~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~v 115 (290)
.-+.+||-|.||++=. ...|.+|-=.+= ..+... +| .+.+-+
T Consensus 214 tyv~wSP~GTYL~t~H--k~GI~lWGG~~f---~r~~RF-----------------------~H----------p~Vq~i 255 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFH--KQGIALWGGESF---DRIQRF-----------------------YH----------PGVQFI 255 (698)
T ss_pred eeEEecCCceEEEEEe--ccceeeecCccH---HHHHhc-----------------------cC----------CCceee
Confidence 3588999999996443 456888853221 111111 01 367889
Q ss_pred EEccCCCEEEEEcCC--CCCcceeecccccCCCceeecceeeeeeecccccccCc--cccCccccCCCCceeEEEEccCC
Q psy11412 116 QLSLDGKRIYVSSSL--FSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPL--SSLGSWKYPARSMVTDILISLDD 191 (290)
Q Consensus 116 afsPdG~~lYv~nel--~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~--~~~~~~~~~~~~~~~~i~~SpDG 191 (290)
.|||..++|..=+-. ...++ ..++..+.+||+.+ ....++.+. .....| | =...|-|+
T Consensus 256 dfSP~EkYLVT~s~~p~~~~~~-------d~e~~~l~IWDI~t---G~lkrsF~~~~~~~~~W-------P-~frWS~Dd 317 (698)
T KOG2314|consen 256 DFSPNEKYLVTYSPEPIIVEED-------DNEGQQLIIWDIAT---GLLKRSFPVIKSPYLKW-------P-IFRWSHDD 317 (698)
T ss_pred ecCCccceEEEecCCccccCcc-------cCCCceEEEEEccc---cchhcceeccCCCcccc-------c-eEEeccCC
Confidence 999999988763321 11111 12456677777654 223333222 111112 1 16789999
Q ss_pred CEEEEEeCCCCcEEEEEe
Q psy11412 192 RYLYTSNWMHGDIRQYDI 209 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv 209 (290)
++++-- ..++|+||+.
T Consensus 318 Ky~Arm--~~~sisIyEt 333 (698)
T KOG2314|consen 318 KYFARM--TGNSISIYET 333 (698)
T ss_pred ceeEEe--ccceEEEEec
Confidence 976533 4579999975
No 279
>KOG4283|consensus
Probab=91.35 E-value=7.8 Score=36.02 Aligned_cols=75 Identities=21% Similarity=0.346 Sum_probs=45.2
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceee-cccccCC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIK-GRRFTGS 258 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~ 258 (290)
..+-++..||--.++.++.-.++.|.+|||.... +- ..++|.......| .++ .+...+-
T Consensus 189 ~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRras-----gc------------f~~lD~hn~k~~p---~~~~n~ah~gk 248 (397)
T KOG4283|consen 189 DGVLAVEWSPSSEWVLATGSADGAIRLWDIRRAS-----GC------------FRVLDQHNTKRPP---ILKTNTAHYGK 248 (397)
T ss_pred CceEEEEeccCceeEEEecCCCceEEEEEeeccc-----ce------------eEEeecccCccCc---cccccccccce
Confidence 3567788999988877776689999999995321 10 1112211100011 111 1112245
Q ss_pred cceEEEccCCCEEEEE
Q psy11412 259 SQMFQLSLDGKRIYVS 274 (290)
Q Consensus 259 P~~~a~sPDG~~L~Va 274 (290)
.++++++.||++|+..
T Consensus 249 vngla~tSd~~~l~~~ 264 (397)
T KOG4283|consen 249 VNGLAWTSDARYLASC 264 (397)
T ss_pred eeeeeecccchhhhhc
Confidence 8999999999998865
No 280
>KOG1034|consensus
Probab=91.30 E-value=1.1 Score=41.96 Aligned_cols=30 Identities=17% Similarity=0.305 Sum_probs=25.8
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
..+-.|.||+||+++..+. .+.+|.+|++.
T Consensus 182 deVLSvD~~~~gd~i~ScG-mDhslk~W~l~ 211 (385)
T KOG1034|consen 182 DEVLSVDFSLDGDRIASCG-MDHSLKLWRLN 211 (385)
T ss_pred CcEEEEEEcCCCCeeeccC-CcceEEEEecC
Confidence 4677899999999977666 78899999996
No 281
>COG2133 Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism]
Probab=91.29 E-value=9.1 Score=37.05 Aligned_cols=27 Identities=15% Similarity=0.078 Sum_probs=20.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEE
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYD 61 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~d 61 (290)
+|..+++-||| .+.|+-...|.|+++.
T Consensus 68 ~p~~~~~lP~G-~~~v~er~~G~l~~i~ 94 (399)
T COG2133 68 HPWGLARLPDG-VLLVTERPTGRLRLIS 94 (399)
T ss_pred CchhheecCCc-eEEEEccCCccEEEec
Confidence 88999999999 5555555457777765
No 282
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=90.91 E-value=2.6 Score=39.66 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=23.3
Q ss_pred CCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCc
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 225 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg 225 (290)
.|..||+.+ .++.|.++|..+ .+.+.++++++
T Consensus 319 ~g~~l~~~~-~~G~l~~~d~~t---G~~~~~~~~~~ 350 (377)
T TIGR03300 319 VGGYLVVGD-FEGYLHWLSRED---GSFVARLKTDG 350 (377)
T ss_pred ECCEEEEEe-CCCEEEEEECCC---CCEEEEEEcCC
Confidence 467899988 678999998643 46666766654
No 283
>KOG1520|consensus
Probab=90.47 E-value=10 Score=36.22 Aligned_cols=20 Identities=20% Similarity=0.451 Sum_probs=17.8
Q ss_pred CCceEEEEccCCCEEEEEcC
Q psy11412 110 GSSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~ne 129 (290)
+.|-+++|+..|.-||++..
T Consensus 115 GRPLGl~f~~~ggdL~VaDA 134 (376)
T KOG1520|consen 115 GRPLGIRFDKKGGDLYVADA 134 (376)
T ss_pred CCcceEEeccCCCeEEEEec
Confidence 46999999999999999865
No 284
>KOG1272|consensus
Probab=90.28 E-value=1.7 Score=42.41 Aligned_cols=30 Identities=13% Similarity=0.145 Sum_probs=26.4
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
.|+++.++.+||+|+..+. -|-|..+|...
T Consensus 131 GPY~~~ytrnGrhlllgGr-KGHlAa~Dw~t 160 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGR-KGHLAAFDWVT 160 (545)
T ss_pred CCeeeeecCCccEEEecCC-ccceeeeeccc
Confidence 7999999999999998775 78999999865
No 285
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=90.11 E-value=8.6 Score=34.12 Aligned_cols=64 Identities=17% Similarity=0.266 Sum_probs=41.8
Q ss_pred CCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCC
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGK 269 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~ 269 (290)
|| .||+-.|..+.|..+|. ...++++-|..-+... ..+ ..+.+ .+-++++|+.|++.
T Consensus 185 dG-~lyANVw~t~~I~rI~p---~sGrV~~widlS~L~~------~~~------------~~~~~-~nvlNGIA~~~~~~ 241 (262)
T COG3823 185 DG-ELYANVWQTTRIARIDP---DSGRVVAWIDLSGLLK------ELN------------LDKSN-DNVLNGIAHDPQQD 241 (262)
T ss_pred cc-EEEEeeeeecceEEEcC---CCCcEEEEEEccCCch------hcC------------ccccc-cccccceeecCcCC
Confidence 66 57999998888887754 4567777776644210 000 00011 12479999999999
Q ss_pred EEEEEcC
Q psy11412 270 RIYVSSS 276 (290)
Q Consensus 270 ~L~Van~ 276 (290)
++|++..
T Consensus 242 r~~iTGK 248 (262)
T COG3823 242 RFLITGK 248 (262)
T ss_pred eEEEecC
Confidence 9999864
No 286
>KOG1007|consensus
Probab=89.84 E-value=7.1 Score=36.17 Aligned_cols=83 Identities=14% Similarity=0.170 Sum_probs=55.0
Q ss_pred EEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCC
Q psy11412 14 VIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPE 93 (290)
Q Consensus 14 ~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~ 93 (290)
-+|+.+++-...+ .++-+..+..+.|.|.-+++.+++..+|.|++||.+....|.. ++
T Consensus 197 ~~D~RT~~~~~sI-~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~--el------------------- 254 (370)
T KOG1007|consen 197 FWDLRTMKKNNSI-EDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQ--EL------------------- 254 (370)
T ss_pred EEEccchhhhcch-hhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcccc--cc-------------------
Confidence 3444444433333 3344456889999999999999999999999999876433321 11
Q ss_pred CcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCC
Q psy11412 94 LDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSL 130 (290)
Q Consensus 94 ~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel 130 (290)
.++. .....+.|+|-...|.++...
T Consensus 255 ---~~Hs---------HWvW~VRfn~~hdqLiLs~~S 279 (370)
T KOG1007|consen 255 ---PGHS---------HWVWAVRFNPEHDQLILSGGS 279 (370)
T ss_pred ---CCCc---------eEEEEEEecCccceEEEecCC
Confidence 0111 356678888888888877653
No 287
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=89.63 E-value=0.84 Score=28.40 Aligned_cols=30 Identities=13% Similarity=0.241 Sum_probs=27.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIR 63 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~ 63 (290)
.|.++++++++++||-++...+.|...+++
T Consensus 10 ~~~~la~d~~~~~lYw~D~~~~~I~~~~~~ 39 (43)
T smart00135 10 HPNGLAVDWIEGRLYWTDWGLDVIEVANLD 39 (43)
T ss_pred CcCEEEEeecCCEEEEEeCCCCEEEEEeCC
Confidence 688999999999999999988899888875
No 288
>KOG4283|consensus
Probab=89.62 E-value=18 Score=33.77 Aligned_cols=147 Identities=19% Similarity=0.183 Sum_probs=85.9
Q ss_pred EEEEecCCCccCCCCCCCCCCCceEEEEEcCC--CCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEe
Q psy11412 12 DKVIDIPAKQVQGYPGGDKVPAMVTDILISLD--DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVI 89 (290)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpD--Gr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~ 89 (290)
-||-|+++.|++-.- +.++.++.-+.||= -..|.++...+-+|++.|+..+.--..+ .|
T Consensus 126 lKVWDtnTlQ~a~~F---~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~L----sG------------ 186 (397)
T KOG4283|consen 126 LKVWDTNTLQEAVDF---KMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTL----SG------------ 186 (397)
T ss_pred EEEeecccceeeEEe---ecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeee----cc------------
Confidence 578888888877665 66666666566664 3567777777788999998763211111 11
Q ss_pred cCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCC---CcceeecccccCCCceeecceeeeeeeccccccc
Q psy11412 90 DDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFS---PWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSM 166 (290)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~---~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~ 166 (290)
++ .+.-.+.++|...++..+....+ .||... ..| -+...|.- +..+ .
T Consensus 187 ----------------Hr--~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRr-----asg-cf~~lD~h-----n~k~-~ 236 (397)
T KOG4283|consen 187 ----------------HR--DGVLAVEWSPSSEWVLATGSADGAIRLWDIRR-----ASG-CFRVLDQH-----NTKR-P 236 (397)
T ss_pred ----------------cc--CceEEEEeccCceeEEEecCCCceEEEEEeec-----ccc-eeEEeecc-----cCcc-C
Confidence 21 56777889999988776665322 233210 011 11111110 0000 1
Q ss_pred CccccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 167 PLSSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 167 p~~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
|... .. ....+...+++++.||++|+.-. .++.+++|....
T Consensus 237 p~~~-~n--~ah~gkvngla~tSd~~~l~~~g-td~r~r~wn~~~ 277 (397)
T KOG4283|consen 237 PILK-TN--TAHYGKVNGLAWTSDARYLASCG-TDDRIRVWNMES 277 (397)
T ss_pred cccc-cc--ccccceeeeeeecccchhhhhcc-CccceEEeeccc
Confidence 1110 00 01123577899999999998766 789999998854
No 289
>KOG0301|consensus
Probab=89.36 E-value=5.6 Score=40.58 Aligned_cols=106 Identities=19% Similarity=0.276 Sum_probs=66.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+|++....+++ |.++.| +-++.+|.+.+-. .. .-| |+ ..+.
T Consensus 103 nVC~ls~~~~~~-~iSgSW-D~TakvW~~~~l~---~~---l~g---------------------H~---------asVW 144 (745)
T KOG0301|consen 103 NVCSLSIGEDGT-LISGSW-DSTAKVWRIGELV---YS---LQG---------------------HT---------ASVW 144 (745)
T ss_pred ceeeeecCCcCc-eEeccc-ccceEEecchhhh---cc---cCC---------------------cc---------hhee
Confidence 688888888888 667777 6699999875421 10 011 11 3566
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.+++-|++ .|++...+. .+..|... ..+++ +.+ ....++++++=+++.|
T Consensus 145 Av~~l~e~--~~vTgsaDK---------------tIklWk~~-----~~l~t-----f~g----HtD~VRgL~vl~~~~f 193 (745)
T KOG0301|consen 145 AVASLPEN--TYVTGSADK---------------TIKLWKGG-----TLLKT-----FSG----HTDCVRGLAVLDDSHF 193 (745)
T ss_pred eeeecCCC--cEEeccCcc---------------eeeeccCC-----chhhh-----hcc----chhheeeeEEecCCCe
Confidence 78888888 577765221 22222211 11111 111 1246888999999999
Q ss_pred EEEEeCCCCcEEEEEec
Q psy11412 194 LYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~ 210 (290)
|-++| ++.|..|+++
T Consensus 194 lScsN--Dg~Ir~w~~~ 208 (745)
T KOG0301|consen 194 LSCSN--DGSIRLWDLD 208 (745)
T ss_pred EeecC--CceEEEEecc
Confidence 98887 7899999994
No 290
>KOG0276|consensus
Probab=89.30 E-value=8.9 Score=38.95 Aligned_cols=116 Identities=11% Similarity=0.153 Sum_probs=69.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
++-.|+|.|...--++++.-+.+|.||.+..+ ...-++. |+ ..|+.
T Consensus 142 yVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~---~~nfTl~-gH------------------------------ekGVN 187 (794)
T KOG0276|consen 142 YVMQVAFNPKDPNTFASASLDRTVKVWSLGSP---HPNFTLE-GH------------------------------EKGVN 187 (794)
T ss_pred EEEEEEecCCCccceeeeeccccEEEEEcCCC---CCceeee-cc------------------------------ccCcc
Confidence 45679999976555555445899999998542 2222221 21 15888
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
.+.|=+.|..=|..+. .|+..+.+||-. ..+-+++ .+| .....+.+.|+|-=-.
T Consensus 188 ~Vdyy~~gdkpylIsg--------------aDD~tiKvWDyQ---tk~CV~T-----LeG----Ht~Nvs~v~fhp~lpi 241 (794)
T KOG0276|consen 188 CVDYYTGGDKPYLISG--------------ADDLTIKVWDYQ---TKSCVQT-----LEG----HTNNVSFVFFHPELPI 241 (794)
T ss_pred eEEeccCCCcceEEec--------------CCCceEEEeecc---hHHHHHH-----hhc----ccccceEEEecCCCcE
Confidence 8999888877787665 234344444422 2222332 112 1234667888887655
Q ss_pred EEEEeCCCCcEEEEEec
Q psy11412 194 LYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~ 210 (290)
..|+-.+++|.+|.-.
T Consensus 242 -iisgsEDGTvriWhs~ 257 (794)
T KOG0276|consen 242 -IISGSEDGTVRIWNSK 257 (794)
T ss_pred -EEEecCCccEEEecCc
Confidence 4555589999999763
No 291
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=89.22 E-value=22 Score=34.27 Aligned_cols=30 Identities=20% Similarity=0.226 Sum_probs=23.2
Q ss_pred CCceeEEEEccCCCEEEEEeCCCCcEEEEEe
Q psy11412 179 RSMVTDILISLDDRYLYTSNWMHGDIRQYDI 209 (290)
Q Consensus 179 ~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv 209 (290)
++.+.+|++...-.+||++.+ +--|+.|+.
T Consensus 207 ~sQ~EGCVVDDe~g~LYvgEE-~~GIW~y~A 236 (381)
T PF02333_consen 207 GSQPEGCVVDDETGRLYVGEE-DVGIWRYDA 236 (381)
T ss_dssp SS-EEEEEEETTTTEEEEEET-TTEEEEEES
T ss_pred CCcceEEEEecccCCEEEecC-ccEEEEEec
Confidence 356888999999999999984 455777765
No 292
>KOG0300|consensus
Probab=88.86 E-value=8.9 Score=35.96 Aligned_cols=130 Identities=18% Similarity=0.270 Sum_probs=74.3
Q ss_pred EEEEecCCCccCCCCCCCCCCCc---eEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEE
Q psy11412 12 DKVIDIPAKQVQGYPGGDKVPAM---VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTV 88 (290)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~v~~~---p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v 88 (290)
..+-|++++.++..+ .++ -.++.-.|.-|.+.++. -+-+.++||+.+ + ...+. +.-|+
T Consensus 296 AnlwDVEtge~v~~L-----tGHd~ELtHcstHptQrLVvTsS-rDtTFRLWDFRe-a-I~sV~-VFQGH---------- 356 (481)
T KOG0300|consen 296 ANLWDVETGEVVNIL-----TGHDSELTHCSTHPTQRLVVTSS-RDTTFRLWDFRE-A-IQSVA-VFQGH---------- 356 (481)
T ss_pred ceeeeeccCceeccc-----cCcchhccccccCCcceEEEEec-cCceeEeccchh-h-cceee-eeccc----------
Confidence 356678887776643 332 33566777766665555 477999999974 2 22221 12221
Q ss_pred ecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCc
Q psy11412 89 IDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPL 168 (290)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~ 168 (290)
...+..++|..|.+ .|++. ++.++.+|++... +..++++-
T Consensus 357 --------------------tdtVTS~vF~~dd~--vVSgS---------------DDrTvKvWdLrNM--RsplATIR- 396 (481)
T KOG0300|consen 357 --------------------TDTVTSVVFNTDDR--VVSGS---------------DDRTVKVWDLRNM--RSPLATIR- 396 (481)
T ss_pred --------------------ccceeEEEEecCCc--eeecC---------------CCceEEEeeeccc--cCcceeee-
Confidence 13566688888877 44443 3445555665442 11222211
Q ss_pred cccCccccCCCCceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 169 SSLGSWKYPARSMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 169 ~~~~~~~~~~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
.......|++|.-+..+..-- .+..|.+||+.
T Consensus 397 ---------tdS~~NRvavs~g~~iIAiPh-DNRqvRlfDln 428 (481)
T KOG0300|consen 397 ---------TDSPANRVAVSKGHPIIAIPH-DNRQVRLFDLN 428 (481)
T ss_pred ---------cCCccceeEeecCCceEEecc-CCceEEEEecC
Confidence 112344578888777766554 56689999984
No 293
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=88.72 E-value=0.91 Score=28.24 Aligned_cols=30 Identities=13% Similarity=0.241 Sum_probs=25.9
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
.|.+++|++++++||-++...+.|...++.
T Consensus 10 ~~~~la~d~~~~~lYw~D~~~~~I~~~~~~ 39 (43)
T smart00135 10 HPNGLAVDWIEGRLYWTDWGLDVIEVANLD 39 (43)
T ss_pred CcCEEEEeecCCEEEEEeCCCCEEEEEeCC
Confidence 456799999999999999988888888774
No 294
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=88.64 E-value=13 Score=31.90 Aligned_cols=24 Identities=17% Similarity=0.315 Sum_probs=19.0
Q ss_pred EcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 40 ISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 40 ~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
..+++.+||+++ .++.|.+||..+
T Consensus 32 ~~~~~~~v~~~~-~~~~l~~~d~~t 55 (238)
T PF13360_consen 32 AVPDGGRVYVAS-GDGNLYALDAKT 55 (238)
T ss_dssp EEEETTEEEEEE-TTSEEEEEETTT
T ss_pred EEEeCCEEEEEc-CCCEEEEEECCC
Confidence 335788899986 478999999865
No 295
>KOG4227|consensus
Probab=88.56 E-value=6.2 Score=37.92 Aligned_cols=119 Identities=16% Similarity=0.220 Sum_probs=71.8
Q ss_pred eEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceE
Q psy11412 35 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQM 114 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~ 114 (290)
..+++|.-..++||... ..++|...|++... ++++... ....+.+.|
T Consensus 108 IF~L~F~~~N~~~~SG~-~~~~VI~HDiEt~q------si~V~~~--------------------------~~~~~~VY~ 154 (609)
T KOG4227|consen 108 IFSLEFDLENRFLYSGE-RWGTVIKHDIETKQ------SIYVANE--------------------------NNNRGDVYH 154 (609)
T ss_pred eEEEEEccCCeeEecCC-CcceeEeeecccce------eeeeecc--------------------------cCcccceee
Confidence 33799999999999664 47899999986521 1222100 001146788
Q ss_pred EEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecc-cccccCccccCccccCC--CCceeEEEEccCC
Q psy11412 115 FQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRN-EMRSMPLSSLGSWKYPA--RSMVTDILISLDD 191 (290)
Q Consensus 115 vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~-~i~~~p~~~~~~~~~~~--~~~~~~i~~SpDG 191 (290)
|..||-..+|.++.. .+.+..|+..+ ++ .+.. .++. +..-+.+-|.|-.
T Consensus 155 m~~~P~DN~~~~~t~----------------~~~V~~~D~Rd---~~~~~~~---------~~~AN~~~~F~t~~F~P~~ 206 (609)
T KOG4227|consen 155 MDQHPTDNTLIVVTR----------------AKLVSFIDNRD---RQNPISL---------VLPANSGKNFYTAEFHPET 206 (609)
T ss_pred cccCCCCceEEEEec----------------CceEEEEeccC---CCCCCce---------eeecCCCccceeeeecCCC
Confidence 999999888888654 23444455433 11 1110 0111 1233557799987
Q ss_pred CEEEEEeCCCCcEEEEEecCCCC
Q psy11412 192 RYLYTSNWMHGDIRQYDIRDTAH 214 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~d~~~ 214 (290)
-.|...+-..+.+-+||+..++.
T Consensus 207 P~Li~~~~~~~G~~~~D~R~~~~ 229 (609)
T KOG4227|consen 207 PALILVNSETGGPNVFDRRMQAR 229 (609)
T ss_pred ceeEEeccccCCCCceeeccccc
Confidence 77666555677889999965433
No 296
>KOG0300|consensus
Probab=88.47 E-value=7.2 Score=36.55 Aligned_cols=31 Identities=26% Similarity=0.479 Sum_probs=23.8
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~ 212 (290)
..+..+.|.-|-+.+ |.-.+.+|.|||+.+.
T Consensus 358 dtVTS~vF~~dd~vV--SgSDDrTvKvWdLrNM 388 (481)
T KOG0300|consen 358 DTVTSVVFNTDDRVV--SGSDDRTVKVWDLRNM 388 (481)
T ss_pred cceeEEEEecCCcee--ecCCCceEEEeeeccc
Confidence 456778999998864 4446889999999753
No 297
>KOG0281|consensus
Probab=88.46 E-value=2.1 Score=40.46 Aligned_cols=21 Identities=19% Similarity=0.477 Sum_probs=15.7
Q ss_pred CCCEEEEEeCCCCcEEEEEecC
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
|.|++..+. ++.+|.+|+++.
T Consensus 329 d~kyIVsAS-gDRTikvW~~st 349 (499)
T KOG0281|consen 329 DDKYIVSAS-GDRTIKVWSTST 349 (499)
T ss_pred ccceEEEec-CCceEEEEeccc
Confidence 566655554 899999999863
No 298
>KOG4547|consensus
Probab=88.43 E-value=18 Score=36.09 Aligned_cols=29 Identities=31% Similarity=0.492 Sum_probs=24.9
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
..+..++++|||+.|.++.| +|.+||+.+
T Consensus 145 ~~~~sl~is~D~~~l~~as~---~ik~~~~~~ 173 (541)
T KOG4547|consen 145 PLVSSLCISPDGKILLTASR---QIKVLDIET 173 (541)
T ss_pred CccceEEEcCCCCEEEeccc---eEEEEEccC
Confidence 45678999999999998875 899999965
No 299
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=88.31 E-value=3 Score=40.90 Aligned_cols=52 Identities=8% Similarity=0.029 Sum_probs=34.3
Q ss_pred CceeEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEE
Q psy11412 7 GTYKADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYD 61 (290)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~d 61 (290)
|-+-...-...|++++.... +++.-|..-+-.|-|+-.|.....+|.+.++.
T Consensus 92 Gvf~~l~~~~aPAgs~I~~q---al~~ppv~wa~~~~gqp~~alglsngqv~v~q 143 (733)
T COG4590 92 GVFWSLRSVSAPAGSPIQTQ---ALGFPPVLWAQTPPGQPWFALGLSNGQVAVVQ 143 (733)
T ss_pred cEEEEecccCCCCCCchhhh---hcCCCCcccccCCCCCceEEEeccCCeEEEEe
Confidence 33333333346677766665 56666666667777888888888888887775
No 300
>KOG0307|consensus
Probab=88.12 E-value=2.3 Score=45.30 Aligned_cols=99 Identities=16% Similarity=0.149 Sum_probs=62.3
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCce----------------ecCCCceEEecCCCCCC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGK----------------IQSDSGVTVIDDPELDK 243 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~----------------~~~~~~v~~~~~~~~~~ 243 (290)
+.+.++.|++.+.-|.+|+-.++.|.+||+.++..+-..+....-.. ....+..++||.+.+.
T Consensus 117 G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~- 195 (1049)
T KOG0307|consen 117 GPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKK- 195 (1049)
T ss_pred CceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCC-
Confidence 45778999999997778877889999999987654432221100011 1566789999987642
Q ss_pred CCCcc-eeecccccCCcceEEEccCCC-EEEEEcC-----CCCCCC
Q psy11412 244 QPDPV-IIKGRRFTGSSQMFQLSLDGK-RIYVSSS-----LFSPWD 282 (290)
Q Consensus 244 ~~~~~-~~~~~~~~~~P~~~a~sPDG~-~L~Van~-----~~~~~~ 282 (290)
|-.+ +..+.+ .+...+++.||+. +|++|+. .+.-||
T Consensus 196 -pii~ls~~~~~--~~~S~l~WhP~~aTql~~As~dd~~PviqlWD 238 (1049)
T KOG0307|consen 196 -PIIKLSDTPGR--MHCSVLAWHPDHATQLLVASGDDSAPVIQLWD 238 (1049)
T ss_pred -cccccccCCCc--cceeeeeeCCCCceeeeeecCCCCCceeEeec
Confidence 1111 111111 2456899999875 5666654 555677
No 301
>KOG0301|consensus
Probab=87.54 E-value=15 Score=37.71 Aligned_cols=110 Identities=13% Similarity=0.144 Sum_probs=67.7
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
.+.+.+++.-|++ .|+++..+-+|++|.-. +.+.++ .|| ..-
T Consensus 140 ~asVWAv~~l~e~--~~vTgsaDKtIklWk~~-----~~l~tf-~gH------------------------------tD~ 181 (745)
T KOG0301|consen 140 TASVWAVASLPEN--TYVTGSADKTIKLWKGG-----TLLKTF-SGH------------------------------TDC 181 (745)
T ss_pred chheeeeeecCCC--cEEeccCcceeeeccCC-----chhhhh-ccc------------------------------hhh
Confidence 3456788888888 45566678899999741 222221 121 157
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDD 191 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDG 191 (290)
+|++++-+++.+|=+.|. | .+..|+... ..+.. ..+ ..+..+.|....++
T Consensus 182 VRgL~vl~~~~flScsND----------------g-~Ir~w~~~g----e~l~~-----~~g----htn~vYsis~~~~~ 231 (745)
T KOG0301|consen 182 VRGLAVLDDSHFLSCSND----------------G-SIRLWDLDG----EVLLE-----MHG----HTNFVYSISMALSD 231 (745)
T ss_pred eeeeEEecCCCeEeecCC----------------c-eEEEEeccC----ceeee-----eec----cceEEEEEEecCCC
Confidence 899999999998887664 2 333344311 01110 011 23578888866766
Q ss_pred CEEEEEeCCCCcEEEEEec
Q psy11412 192 RYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 192 r~Lyvs~r~~~~V~v~Dv~ 210 (290)
..+..+. .++++.+|+..
T Consensus 232 ~~Ivs~g-EDrtlriW~~~ 249 (745)
T KOG0301|consen 232 GLIVSTG-EDRTLRIWKKD 249 (745)
T ss_pred CeEEEec-CCceEEEeecC
Confidence 6654444 78999999874
No 302
>KOG1214|consensus
Probab=87.44 E-value=13 Score=39.14 Aligned_cols=107 Identities=14% Similarity=0.225 Sum_probs=64.5
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+.+|+|+=-.+.+|-++-.+-+|+-=.+. +++++.+-. ++. ..|.
T Consensus 1026 IiVGidfDC~e~mvyWtDv~g~SI~rasL~-G~Ep~ti~n------------------------------~~L---~SPE 1071 (1289)
T KOG1214|consen 1026 IIVGIDFDCRERMVYWTDVAGRSISRASLE-GAEPETIVN------------------------------SGL---ISPE 1071 (1289)
T ss_pred eeeeeecccccceEEEeecCCCcccccccc-CCCCceeec------------------------------ccC---CCcc
Confidence 567889988899999888766666543332 233332210 111 5789
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
+||+.--+|.+|-+..+...+.+... +|. .++.+.. ++ + -.|++|++.+=++.
T Consensus 1072 GiAVDh~~Rn~ywtDS~lD~IevA~L-----dG~-----------~rkvLf~------td--L---VNPR~iv~D~~rgn 1124 (1289)
T KOG1214|consen 1072 GIAVDHIRRNMYWTDSVLDKIEVALL-----DGS-----------ERKVLFY------TD--L---VNPRAIVVDPIRGN 1124 (1289)
T ss_pred ceeeeeccceeeeeccccchhheeec-----CCc-----------eeeEEEe------ec--c---cCcceEEeecccCc
Confidence 99999999999998764333322111 111 1111110 01 1 13678999999999
Q ss_pred EEEEeCCC
Q psy11412 194 LYTSNWMH 201 (290)
Q Consensus 194 Lyvs~r~~ 201 (290)
||-++|..
T Consensus 1125 LYwtDWnR 1132 (1289)
T KOG1214|consen 1125 LYWTDWNR 1132 (1289)
T ss_pred eeeccccc
Confidence 99998753
No 303
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=87.36 E-value=4.5 Score=38.58 Aligned_cols=16 Identities=38% Similarity=0.555 Sum_probs=12.4
Q ss_pred eEEEccCCCEEEEEcC
Q psy11412 261 MFQLSLDGKRIYVSSS 276 (290)
Q Consensus 261 ~~a~sPDG~~L~Van~ 276 (290)
.+..|+||++|++...
T Consensus 231 ~~~~s~d~~~l~i~~~ 246 (414)
T PF02897_consen 231 SVSRSKDGRYLFISSS 246 (414)
T ss_dssp EEEE-TTSSEEEEEEE
T ss_pred EEEecCcccEEEEEEE
Confidence 6888999999998644
No 304
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=87.33 E-value=1.2 Score=27.63 Aligned_cols=17 Identities=41% Similarity=0.521 Sum_probs=12.0
Q ss_pred eEEEEccCCCEEE-EEeC
Q psy11412 183 TDILISLDDRYLY-TSNW 199 (290)
Q Consensus 183 ~~i~~SpDGr~Ly-vs~r 199 (290)
....+||||++|| ++++
T Consensus 12 ~~p~~SpDGk~i~f~s~~ 29 (39)
T PF07676_consen 12 GSPAWSPDGKYIYFTSNR 29 (39)
T ss_dssp EEEEE-TTSSEEEEEEEC
T ss_pred cCEEEecCCCEEEEEecC
Confidence 4578999999877 5554
No 305
>KOG0276|consensus
Probab=86.57 E-value=41 Score=34.42 Aligned_cols=169 Identities=11% Similarity=0.133 Sum_probs=89.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccc----------------cCCCceEEecCCCCcCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKI----------------QSDSGVTVIDDPELDKQ 97 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~----------------~~~~~~~v~~~~~~~~~ 97 (290)
.+-+|.|.|..-++..+-+ .|.|.+|+.+.. ..+.++.+-..+ +.+..|.|+...++...
T Consensus 15 RVKsVd~HPtePw~la~Ly-nG~V~IWnyetq---tmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV 90 (794)
T KOG0276|consen 15 RVKSVDFHPTEPWILAALY-NGDVQIWNYETQ---TMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKV 90 (794)
T ss_pred ceeeeecCCCCceEEEeee-cCeeEEEecccc---eeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceee
Confidence 4557889999999987765 899999998652 233323221100 01233444444443321
Q ss_pred CCcceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccC
Q psy11412 98 PDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYP 177 (290)
Q Consensus 98 ~~~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 177 (290)
-. | ... -.-.|.++.||.-.++..++. +-.+..|+-.. ..... ..++|
T Consensus 91 ~~--F--eAH-~DyIR~iavHPt~P~vLtsSD----------------Dm~iKlW~we~---~wa~~----qtfeG---- 138 (794)
T KOG0276|consen 91 KT--F--EAH-SDYIRSIAVHPTLPYVLTSSD----------------DMTIKLWDWEN---EWACE----QTFEG---- 138 (794)
T ss_pred EE--e--ecc-ccceeeeeecCCCCeEEecCC----------------ccEEEEeeccC---ceeee----eEEcC----
Confidence 00 0 000 046788999999886664432 22222222211 00000 01122
Q ss_pred CCCceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceE----------eeEEeeCcee-----cCCCceEEecC
Q psy11412 178 ARSMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVL----------VGQIFLGGKI-----QSDSGVTVIDD 238 (290)
Q Consensus 178 ~~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~----------v~~i~~Gg~~-----~~~~~v~~~~~ 238 (290)
..-.+-.|+|.|...--++|.-.+.+|.||.+-.+..... +..++.|.+. ++|-++.|||-
T Consensus 139 H~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDy 214 (794)
T KOG0276|consen 139 HEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDY 214 (794)
T ss_pred cceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeec
Confidence 1125778999996555566666899999999964322221 2222222111 67778999984
No 306
>KOG3914|consensus
Probab=86.45 E-value=11 Score=35.96 Aligned_cols=30 Identities=20% Similarity=0.345 Sum_probs=22.4
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
..+..|++-++ +.|..+. ||++|.+||+..
T Consensus 195 eFVS~isl~~~-~~LlS~s-GD~tlr~Wd~~s 224 (390)
T KOG3914|consen 195 EFVSTISLTDN-YLLLSGS-GDKTLRLWDITS 224 (390)
T ss_pred hheeeeeeccC-ceeeecC-CCCcEEEEeccc
Confidence 35667777765 4466666 999999999975
No 307
>KOG0974|consensus
Probab=86.31 E-value=3.6 Score=43.56 Aligned_cols=111 Identities=14% Similarity=0.196 Sum_probs=69.7
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCc
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 112 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gP 112 (290)
+.+..+.+|-||+++++.. .+-++++|++++...+.. ...|+ ...+
T Consensus 176 G~iF~i~~s~dg~~i~s~S-dDRsiRlW~i~s~~~~~~---~~fgH------------------------------saRv 221 (967)
T KOG0974|consen 176 GSIFSIVTSLDGRYIASVS-DDRSIRLWPIDSREVLGC---TGFGH------------------------------SARV 221 (967)
T ss_pred CceEEEEEccCCcEEEEEe-cCcceeeeecccccccCc---ccccc------------------------------ccee
Confidence 4778899999999998776 588999999987332221 11111 1578
Q ss_pred eEEEEccCCCEEEEEcCCC--CCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 113 QMFQLSLDGKRIYVSSSLF--SPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 113 r~vafsPdG~~lYv~nel~--~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
....|+|. .++++.|.- .-|+ .++..+. +.+ .. -+...-.++++++
T Consensus 222 w~~~~~~n--~i~t~gedctcrvW~--------~~~~~l~---~y~------------~h-------~g~~iw~~~~~~~ 269 (967)
T KOG0974|consen 222 WACCFLPN--RIITVGEDCTCRVWG--------VNGTQLE---VYD------------EH-------SGKGIWKIAVPIG 269 (967)
T ss_pred EEEEeccc--eeEEeccceEEEEEe--------cccceeh---hhh------------hh-------hhcceeEEEEcCC
Confidence 88999999 888887710 1111 0222211 111 00 0123345778888
Q ss_pred CCEEEEEeCCCCcEEEEEec
Q psy11412 191 DRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~ 210 (290)
--.++++. .++++.+||.-
T Consensus 270 ~~~~vT~g-~Ds~lk~~~l~ 288 (967)
T KOG0974|consen 270 VIIKVTGG-NDSTLKLWDLN 288 (967)
T ss_pred ceEEEeec-cCcchhhhhhh
Confidence 87777777 68889999874
No 308
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=85.91 E-value=5.6 Score=37.15 Aligned_cols=75 Identities=17% Similarity=0.293 Sum_probs=43.6
Q ss_pred ceEEEEEcCCCCEEEEEeCCC------CeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccc
Q psy11412 34 MVTDILISLDDRYLYTSNWMH------GDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRR 107 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~------g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 107 (290)
-+.+|++.+||.+ |++..+. ..|..++.. +.. +..+.+.....+. ... ..+.+
T Consensus 86 D~Egi~~~~~g~~-~is~E~~~~~~~~p~I~~~~~~--G~~--~~~~~vP~~~~~~--------------~~~--~~~~~ 144 (326)
T PF13449_consen 86 DPEGIAVPPDGSF-WISSEGGRTGGIPPRIRRFDLD--GRV--IRRFPVPAAFLPD--------------ANG--TSGRR 144 (326)
T ss_pred ChhHeEEecCCCE-EEEeCCccCCCCCCEEEEECCC--Ccc--cceEccccccccc--------------cCc--ccccc
Confidence 5668999666655 5677767 677777653 222 2222111000000 000 01233
Q ss_pred cCCCceEEEEccCCCEEEEEcC
Q psy11412 108 FTGSSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 108 ~g~gPr~vafsPdG~~lYv~ne 129 (290)
...|.+.|+++|||++||++.|
T Consensus 145 ~N~G~E~la~~~dG~~l~~~~E 166 (326)
T PF13449_consen 145 NNRGFEGLAVSPDGRTLFAAME 166 (326)
T ss_pred CCCCeEEEEECCCCCEEEEEEC
Confidence 4578999999999999999988
No 309
>KOG1587|consensus
Probab=85.24 E-value=42 Score=34.01 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=28.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAH 67 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~ 67 (290)
.+..+.|+|....+.+++..+|+|.+||+.....
T Consensus 244 ~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~ 277 (555)
T KOG1587|consen 244 EVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSD 277 (555)
T ss_pred ceeEEEeccCCcceEEeeccCceEEEEEccCCCC
Confidence 4567899999988888888899999999986544
No 310
>KOG0274|consensus
Probab=85.06 E-value=10 Score=38.15 Aligned_cols=144 Identities=15% Similarity=0.118 Sum_probs=71.0
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCce-------eeeEEeecccc----cCCCceEEecCCCCcCCCC
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPV-------LVGQIFLGGKI----QSDSGVTVIDDPELDKQPD 99 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~-------~~~~i~~g~~~----~~~~~~~v~~~~~~~~~~~ 99 (290)
=.+.+..+++..-+.+| +++..+.++++||..++.-.. .+..+..+... +.+..|.|-+-... .
T Consensus 248 H~g~V~~l~~~~~~~~l-vsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~----~ 322 (537)
T KOG0274|consen 248 HFGGVWGLAFPSGGDKL-VSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNG----A 322 (537)
T ss_pred CCCCceeEEEecCCCEE-EEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccCceEeeccCCceEEEEeccCc----c
Confidence 34457788887644555 455568899999987754322 22222221110 01222222221100 0
Q ss_pred cceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCC
Q psy11412 100 PVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPAR 179 (290)
Q Consensus 100 ~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 179 (290)
-...... ....++.|.++ +..++..+. ++ .+.+|++.. -+-+.. ..+ ..
T Consensus 323 ~l~l~~~-h~~~V~~v~~~--~~~lvsgs~---------------d~-~v~VW~~~~---~~cl~s-----l~g----H~ 371 (537)
T KOG0274|consen 323 CLNLLRG-HTGPVNCVQLD--EPLLVSGSY---------------DG-TVKVWDPRT---GKCLKS-----LSG----HT 371 (537)
T ss_pred eEEEecc-ccccEEEEEec--CCEEEEEec---------------Cc-eEEEEEhhh---ceeeee-----ecC----Cc
Confidence 0000000 12456667777 667776554 33 455555432 122221 111 11
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~ 212 (290)
..++.+.+..- ..+|.+. .+.+|.+||+...
T Consensus 372 ~~V~sl~~~~~-~~~~Sgs-~D~~IkvWdl~~~ 402 (537)
T KOG0274|consen 372 GRVYSLIVDSE-NRLLSGS-LDTTIKVWDLRTK 402 (537)
T ss_pred ceEEEEEecCc-ceEEeee-eccceEeecCCch
Confidence 35666666554 7777766 7899999999754
No 311
>KOG4659|consensus
Probab=84.75 E-value=23 Score=39.20 Aligned_cols=26 Identities=23% Similarity=0.213 Sum_probs=19.8
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEe
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDI 209 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv 209 (290)
.|.+|+|+.+| .||.++ + -.|+++|-
T Consensus 476 ~PkGIa~dk~g-~lYfaD-~-t~IR~iD~ 501 (1899)
T KOG4659|consen 476 FPKGIAFDKMG-NLYFAD-G-TRIRVIDT 501 (1899)
T ss_pred cCCceeEccCC-cEEEec-c-cEEEEecc
Confidence 58889999999 568776 2 36888765
No 312
>KOG0642|consensus
Probab=84.53 E-value=3.2 Score=41.29 Aligned_cols=27 Identities=19% Similarity=0.485 Sum_probs=23.8
Q ss_pred eeEEEEccCCCEEEEEeCCCCcEEEEEe
Q psy11412 182 VTDILISLDDRYLYTSNWMHGDIRQYDI 209 (290)
Q Consensus 182 ~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv 209 (290)
+-.+++++.|..+|... .+++|..|.+
T Consensus 347 Vl~v~v~~n~~~~ysgg-~Dg~I~~w~~ 373 (577)
T KOG0642|consen 347 VLCVVVPSNGEHCYSGG-IDGTIRCWNL 373 (577)
T ss_pred eEEEEecCCceEEEeec-cCceeeeecc
Confidence 45689999999999998 7999999966
No 313
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=84.07 E-value=58 Score=35.17 Aligned_cols=62 Identities=15% Similarity=0.088 Sum_probs=42.0
Q ss_pred CceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC---CCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccC
Q psy11412 33 AMVTDILISLDDRYLYTSNWMHGDIRQYDIRD---TAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFT 109 (290)
Q Consensus 33 ~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d---~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g 109 (290)
..+.++.+-+|...|+++-. +|.|.++..+. ....+.++.+ .
T Consensus 76 ~~ivs~~yl~d~~~l~~~~~-~Gdi~~~~~~~~~~~~~~E~VG~v----------------------------------d 120 (928)
T PF04762_consen 76 DKIVSFQYLADSESLCIALA-SGDIILVREDPDPDEDEIEIVGSV----------------------------------D 120 (928)
T ss_pred CcEEEEEeccCCCcEEEEEC-CceEEEEEccCCCCCceeEEEEEE----------------------------------c
Confidence 35677888888888877754 67888883321 1223333322 1
Q ss_pred CCceEEEEccCCCEEEEEcC
Q psy11412 110 GSSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~ne 129 (290)
.|...+++|||+..|+++..
T Consensus 121 ~GI~a~~WSPD~Ella~vT~ 140 (928)
T PF04762_consen 121 SGILAASWSPDEELLALVTG 140 (928)
T ss_pred CcEEEEEECCCcCEEEEEeC
Confidence 57888999999999999875
No 314
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=83.82 E-value=22 Score=34.26 Aligned_cols=18 Identities=28% Similarity=0.174 Sum_probs=11.0
Q ss_pred CceEEEEccCCCEEEEEc
Q psy11412 111 SSQMFQLSLDGKRIYVSS 128 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~n 128 (290)
..-|=-|+|||++++...
T Consensus 239 ~~gHEfw~~DG~~i~y~~ 256 (386)
T PF14583_consen 239 SVGHEFWVPDGSTIWYDS 256 (386)
T ss_dssp EEEEEEE-TTSS-EEEEE
T ss_pred ccccccccCCCCEEEEEe
Confidence 344556999998887653
No 315
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.34 E-value=39 Score=31.46 Aligned_cols=123 Identities=11% Similarity=0.097 Sum_probs=65.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
...+++++||.++||+..-. .. .+.-++. ++.++.++++.+- +-|.
T Consensus 87 nvS~LTynp~~rtLFav~n~-p~-~iVElt~--~GdlirtiPL~g~------------------------------~DpE 132 (316)
T COG3204 87 NVSSLTYNPDTRTLFAVTNK-PA-AIVELTK--EGDLIRTIPLTGF------------------------------SDPE 132 (316)
T ss_pred cccceeeCCCcceEEEecCC-Cc-eEEEEec--CCceEEEeccccc------------------------------CChh
Confidence 47889999999999987532 23 2223332 3556666655421 4567
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCC-CCceeEEEEccCCC
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPA-RSMVTDILISLDDR 192 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~-~~~~~~i~~SpDGr 192 (290)
.|...-+|+++. +.|-...+-.+.... ++ .+...... .++.+. ... ..+-.+++.+|..+
T Consensus 133 ~Ieyig~n~fvi-~dER~~~l~~~~vd~---~t-~~~~~~~~---------~i~L~~-----~~k~N~GfEGlA~d~~~~ 193 (316)
T COG3204 133 TIEYIGGNQFVI-VDERDRALYLFTVDA---DT-TVISAKVQ---------KIPLGT-----TNKKNKGFEGLAWDPVDH 193 (316)
T ss_pred HeEEecCCEEEE-EehhcceEEEEEEcC---Cc-cEEeccce---------EEeccc-----cCCCCcCceeeecCCCCc
Confidence 778777776544 344222222221111 11 11111110 111111 111 12456799999999
Q ss_pred EEEEEeCCCCcEEEEEec
Q psy11412 193 YLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~ 210 (290)
.||++- ..+=+.+|-+.
T Consensus 194 ~l~~aK-Er~P~~I~~~~ 210 (316)
T COG3204 194 RLFVAK-ERNPIGIFEVT 210 (316)
T ss_pred eEEEEE-ccCCcEEEEEe
Confidence 999998 45566677663
No 316
>KOG0277|consensus
Probab=83.13 E-value=9.6 Score=34.70 Aligned_cols=117 Identities=17% Similarity=0.167 Sum_probs=69.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
-++..++||--.-|+.+..+++.+++||++.++....+ .... ...-
T Consensus 149 ~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i---~ah~-------------------------------~Eil 194 (311)
T KOG0277|consen 149 CIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSI---EAHN-------------------------------SEIL 194 (311)
T ss_pred EEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEE---Eecc-------------------------------ceeE
Confidence 45678999988888888889999999999876543332 2210 1122
Q ss_pred EEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccCCCE
Q psy11412 114 MFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLDDRY 193 (290)
Q Consensus 114 ~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpDGr~ 193 (290)
..-++.-.+.+.++.. .++.+..+|+... + .|.....+ .+-..+.|.+||--+-
T Consensus 195 ~cdw~ky~~~vl~Tg~---------------vd~~vr~wDir~~------r-~pl~eL~g----h~~AVRkvk~Sph~~~ 248 (311)
T KOG0277|consen 195 CCDWSKYNHNVLATGG---------------VDNLVRGWDIRNL------R-TPLFELNG----HGLAVRKVKFSPHHAS 248 (311)
T ss_pred eecccccCCcEEEecC---------------CCceEEEEehhhc------c-ccceeecC----CceEEEEEecCcchhh
Confidence 2334444444444443 1223333444331 1 11111111 1225778999999888
Q ss_pred EEEEeCCCCcEEEEEec
Q psy11412 194 LYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 194 Lyvs~r~~~~V~v~Dv~ 210 (290)
|.+|.-.+-++.+||..
T Consensus 249 lLaSasYDmT~riw~~~ 265 (311)
T KOG0277|consen 249 LLASASYDMTVRIWDPE 265 (311)
T ss_pred HhhhccccceEEecccc
Confidence 88777789999999875
No 317
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=83.03 E-value=3.1 Score=23.10 Aligned_cols=27 Identities=33% Similarity=0.533 Sum_probs=21.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEE
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYD 61 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~d 61 (290)
....+.++++++++++++. ++.+++|+
T Consensus 14 ~i~~~~~~~~~~~~~~~~~-d~~~~~~~ 40 (40)
T smart00320 14 PVTSVAFSPDGKYLASASD-DGTIKLWD 40 (40)
T ss_pred ceeEEEECCCCCEEEEecC-CCeEEEcC
Confidence 4678899999988876654 78999885
No 318
>KOG1538|consensus
Probab=82.56 E-value=2.5 Score=43.14 Aligned_cols=30 Identities=23% Similarity=0.310 Sum_probs=25.3
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEecCC
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~ 212 (290)
..++++|-|||..|.++. ++.+.+||+.+.
T Consensus 14 ci~d~afkPDGsqL~lAA--g~rlliyD~ndG 43 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA--GSRLLVYDTSDG 43 (1081)
T ss_pred chheeEECCCCceEEEec--CCEEEEEeCCCc
Confidence 467899999999999886 568999999763
No 319
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=82.55 E-value=12 Score=37.10 Aligned_cols=26 Identities=27% Similarity=0.568 Sum_probs=21.4
Q ss_pred EEEccCCCEEEEEeCCC--CcEEEEEec
Q psy11412 185 ILISLDDRYLYTSNWMH--GDIRQYDIR 210 (290)
Q Consensus 185 i~~SpDGr~Lyvs~r~~--~~V~v~Dv~ 210 (290)
+.|||.+|+..++..++ ++|.+||..
T Consensus 321 ~~fsp~~r~il~agF~nl~gni~i~~~~ 348 (561)
T COG5354 321 IFFSPHERYILFAGFDNLQGNIEIFDPA 348 (561)
T ss_pred ccccCcccEEEEecCCccccceEEeccC
Confidence 77999999998887764 788899864
No 320
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=82.22 E-value=37 Score=30.42 Aligned_cols=19 Identities=26% Similarity=0.371 Sum_probs=16.5
Q ss_pred CceEEEEccCCCEEEEEcC
Q psy11412 111 SSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~ne 129 (290)
....|.+||||.++.++.+
T Consensus 113 ~I~~l~vSpDG~RvA~v~~ 131 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVE 131 (253)
T ss_pred ceEEEEECCCCcEEEEEEe
Confidence 5678999999999999875
No 321
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=81.66 E-value=4 Score=25.16 Aligned_cols=27 Identities=22% Similarity=0.292 Sum_probs=17.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCC--CeEEEE
Q psy11412 34 MVTDILISLDDRYLYTSNWMH--GDIRQY 60 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~--g~V~v~ 60 (290)
.-...++||||++||-+.... |.-.+|
T Consensus 10 ~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 10 DDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 456789999998887664434 554444
No 322
>KOG2314|consensus
Probab=81.38 E-value=21 Score=35.90 Aligned_cols=110 Identities=16% Similarity=0.187 Sum_probs=63.2
Q ss_pred CCCceEEEEEcCCCCEEEEE--eCCCCeEEEEEcC-CCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccc
Q psy11412 31 VPAMVTDILISLDDRYLYTS--NWMHGDIRQYDIR-DTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRR 107 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva--~~~~g~V~v~dv~-d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 107 (290)
+...+-+.+.-|-|...++- +....+|+.|-+. ....++++..+.-
T Consensus 444 lke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk------------------------------- 492 (698)
T KOG2314|consen 444 LKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK------------------------------- 492 (698)
T ss_pred cchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc-------------------------------
Confidence 34456677888988776554 3345678888886 3334444332100
Q ss_pred cCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEE
Q psy11412 108 FTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILI 187 (290)
Q Consensus 108 ~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~ 187 (290)
..-.++-+||.|+++.+++-.+..-++.+++ .. .+..+.+ ..++......+-.
T Consensus 493 --~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D-------------~~-~a~~k~~-----------~~~eh~~at~veW 545 (698)
T KOG2314|consen 493 --KFANTVFWSPKGRFVVVAALVSRRGDLEFYD-------------TD-YADLKDT-----------ASPEHFAATEVEW 545 (698)
T ss_pred --cccceEEEcCCCcEEEEEEecccccceEEEe-------------cc-hhhhhhc-----------cCccccccccceE
Confidence 3456799999999999987533222233322 11 0000011 1223345667889
Q ss_pred ccCCCEEEEEe
Q psy11412 188 SLDDRYLYTSN 198 (290)
Q Consensus 188 SpDGr~Lyvs~ 198 (290)
.|-||++.++.
T Consensus 546 DPtGRYvvT~s 556 (698)
T KOG2314|consen 546 DPTGRYVVTSS 556 (698)
T ss_pred CCCCCEEEEee
Confidence 99999976544
No 323
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=81.23 E-value=38 Score=30.98 Aligned_cols=32 Identities=19% Similarity=0.070 Sum_probs=21.2
Q ss_pred ccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEee
Q psy11412 188 SLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFL 223 (290)
Q Consensus 188 SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~ 223 (290)
..||+.||.|+ |++.|..+|-. ..+.+.++.+
T Consensus 136 t~dg~~Li~SD-GS~~L~~~dP~---~f~~~~~i~V 167 (264)
T PF05096_consen 136 TSDGKRLIMSD-GSSRLYFLDPE---TFKEVRTIQV 167 (264)
T ss_dssp EECSSCEEEE--SSSEEEEE-TT---T-SEEEEEE-
T ss_pred EcCCCEEEEEC-CccceEEECCc---ccceEEEEEE
Confidence 37999999999 89999988643 4555555544
No 324
>KOG4499|consensus
Probab=80.97 E-value=9.6 Score=34.45 Aligned_cols=91 Identities=19% Similarity=0.215 Sum_probs=53.5
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
=+.+++++-|.|.+|++..+.-+++.+.|+- ..|.....-.+.++. + .+ | . +...|-++++.-+
T Consensus 159 IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~--~tG~~snr~~i~dlr--k-~~--~---~------e~~~PDGm~ID~e 222 (310)
T KOG4499|consen 159 ISNGLAWDSDAKKFYYIDSLNYEVDAYDYDC--PTGDLSNRKVIFDLR--K-SQ--P---F------ESLEPDGMTIDTE 222 (310)
T ss_pred CCccccccccCcEEEEEccCceEEeeeecCC--CcccccCcceeEEec--c-CC--C---c------CCCCCCcceEccC
Confidence 4677999999999999999877777665533 112111111112210 0 00 0 0 1123445778777
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCceEeeEE
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQI 221 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i 221 (290)
| +||++.+..++|.-+|.. +.+++.++
T Consensus 223 G-~L~Va~~ng~~V~~~dp~---tGK~L~ei 249 (310)
T KOG4499|consen 223 G-NLYVATFNGGTVQKVDPT---TGKILLEI 249 (310)
T ss_pred C-cEEEEEecCcEEEEECCC---CCcEEEEE
Confidence 7 579999888888777654 45665554
No 325
>KOG0290|consensus
Probab=80.96 E-value=3.1 Score=38.47 Aligned_cols=92 Identities=16% Similarity=0.216 Sum_probs=55.8
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEee----------Cce-------e-cCCCceEEecCCCC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFL----------GGK-------I-QSDSGVTVIDDPEL 241 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~----------Gg~-------~-~~~~~v~~~~~~~~ 241 (290)
..+++|+|+.+|+-+++|.-.+|+|++||+.+.++-+.+-+-+. ..+ + .+...|.++|..-
T Consensus 197 KEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~- 275 (364)
T KOG0290|consen 197 KEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRV- 275 (364)
T ss_pred cceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecC-
Confidence 46899999999999999998899999999977665444322111 000 0 3445566666421
Q ss_pred CCCCCcceeecccccCCcceEEEccCCC-EEEEEc
Q psy11412 242 DKQPDPVIIKGRRFTGSSQMFQLSLDGK-RIYVSS 275 (290)
Q Consensus 242 ~~~~~~~~~~~~~~~~~P~~~a~sPDG~-~L~Van 275 (290)
+..|.. .+.+. ++..+++++.|..+ .|..|.
T Consensus 276 P~tpva-~L~~H--~a~VNgIaWaPhS~~hictaG 307 (364)
T KOG0290|consen 276 PCTPVA-RLRNH--QASVNGIAWAPHSSSHICTAG 307 (364)
T ss_pred CCccee-hhhcC--cccccceEecCCCCceeeecC
Confidence 223321 12222 23478899988554 444443
No 326
>KOG4659|consensus
Probab=80.92 E-value=39 Score=37.53 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=24.5
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
+++-+.+|+||=..+||+++-. +=.||.+.+
T Consensus 406 ~sh~Yy~AvsPvdgtlyvSdp~--s~qv~rv~s 436 (1899)
T KOG4659|consen 406 TSHSYYIAVSPVDGTLYVSDPL--SKQVWRVSS 436 (1899)
T ss_pred ccceeEEEecCcCceEEecCCC--cceEEEecc
Confidence 4577899999999999999864 445677765
No 327
>PRK10115 protease 2; Provisional
Probab=80.80 E-value=75 Score=33.00 Aligned_cols=29 Identities=14% Similarity=0.196 Sum_probs=19.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCCe----EEEEEcC
Q psy11412 35 VTDILISLDDRYLYTSNWMHGD----IRQYDIR 63 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~----V~v~dv~ 63 (290)
...+.+||||++|+.+-..+|. |.+.|+.
T Consensus 129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~ 161 (686)
T PRK10115 129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLE 161 (686)
T ss_pred EeEEEECCCCCEEEEEecCCCcEEEEEEEEECC
Confidence 4467899999998877443333 5666664
No 328
>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats.
Probab=79.84 E-value=4.7 Score=40.39 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=29.5
Q ss_pred cCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCc
Q psy11412 189 LDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 225 (290)
Q Consensus 189 pDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg 225 (290)
-||+++|+.+ ++.|.++|..+++..+.+++|...+
T Consensus 20 TDG~yIY~v~--~~~l~Iida~p~~~~~~~s~I~~~~ 54 (521)
T PF09826_consen 20 TDGEYIYVVS--GGRLYIIDAYPAEEMKVVSRIDLDG 54 (521)
T ss_pred ECCCEEEEEe--CCEEEEEECCCchhceEEEEEecCC
Confidence 4999999998 5799999997667788888887766
No 329
>KOG0274|consensus
Probab=79.34 E-value=43 Score=33.73 Aligned_cols=28 Identities=14% Similarity=0.338 Sum_probs=18.2
Q ss_pred EEEccCCCEEEEEeCCCCcEEEEEecCCC
Q psy11412 185 ILISLDDRYLYTSNWMHGDIRQYDIRDTA 213 (290)
Q Consensus 185 i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~ 213 (290)
..++-++-.++.+. .+++|.||++.++.
T Consensus 295 ~~~~~~~~~~~sgs-~D~tVkVW~v~n~~ 322 (537)
T KOG0274|consen 295 RCLTIDPFLLVSGS-RDNTVKVWDVTNGA 322 (537)
T ss_pred EEEEccCceEeecc-CCceEEEEeccCcc
Confidence 34455555554444 68999999997543
No 330
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=79.22 E-value=37 Score=32.19 Aligned_cols=30 Identities=20% Similarity=0.267 Sum_probs=19.8
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeC
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 224 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~G 224 (290)
+.+||+.+ .++.|.++|..+ .+.+.+..++
T Consensus 335 ~g~l~v~~-~~G~l~~ld~~t---G~~~~~~~~~ 364 (394)
T PRK11138 335 NGYLVVGD-SEGYLHWINRED---GRFVAQQKVD 364 (394)
T ss_pred CCEEEEEe-CCCEEEEEECCC---CCEEEEEEcC
Confidence 45678887 678888888643 4555555543
No 331
>KOG1240|consensus
Probab=79.11 E-value=34 Score=37.61 Aligned_cols=28 Identities=18% Similarity=0.445 Sum_probs=22.5
Q ss_pred EEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 37 DILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 37 ~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
.++.+++..-+++++..+|+|++|+...
T Consensus 1053 k~a~s~~~~s~FvsgS~DGtVKvW~~~k 1080 (1431)
T KOG1240|consen 1053 KLAVSSEHTSLFVSGSDDGTVKVWNLRK 1080 (1431)
T ss_pred ceeecCCCCceEEEecCCceEEEeeehh
Confidence 5777777766777888899999999864
No 332
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=78.82 E-value=4.1 Score=22.52 Aligned_cols=27 Identities=33% Similarity=0.560 Sum_probs=21.2
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEE
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYD 208 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~D 208 (290)
....+.++++++++.++. .++.|.+|+
T Consensus 14 ~i~~~~~~~~~~~~~~~~-~d~~~~~~~ 40 (40)
T smart00320 14 PVTSVAFSPDGKYLASAS-DDGTIKLWD 40 (40)
T ss_pred ceeEEEECCCCCEEEEec-CCCeEEEcC
Confidence 356788999998887776 678898885
No 333
>KOG0302|consensus
Probab=78.73 E-value=19 Score=34.52 Aligned_cols=66 Identities=14% Similarity=0.092 Sum_probs=42.7
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
++-++-|.++.+-.+| +++..+|++++||++.-...+.+++++-+. ..
T Consensus 302 ~sDVNVISWnr~~~lL-asG~DdGt~~iwDLR~~~~~~pVA~fk~Hk-------------------------------~p 349 (440)
T KOG0302|consen 302 NSDVNVISWNRREPLL-ASGGDDGTLSIWDLRQFKSGQPVATFKYHK-------------------------------AP 349 (440)
T ss_pred CCceeeEEccCCccee-eecCCCceEEEEEhhhccCCCcceeEEecc-------------------------------CC
Confidence 4456678888887755 566679999999997533233344433320 23
Q ss_pred ceEEEEccCCCEEEEEcC
Q psy11412 112 SQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~ne 129 (290)
...|.+||.....+.++.
T Consensus 350 ItsieW~p~e~s~iaasg 367 (440)
T KOG0302|consen 350 ITSIEWHPHEDSVIAASG 367 (440)
T ss_pred eeEEEeccccCceEEecc
Confidence 466899998776666654
No 334
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=78.72 E-value=34 Score=36.10 Aligned_cols=60 Identities=20% Similarity=0.181 Sum_probs=38.1
Q ss_pred eEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceE
Q psy11412 183 TDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMF 262 (290)
Q Consensus 183 ~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 262 (290)
..++-+.+|..+..| ..|.|++||-. +. +.=..+|. +|.-..++
T Consensus 581 s~~aTt~~G~iavgs--~~G~IRLyd~~--g~-~AKT~lp~-------------------------------lG~pI~~i 624 (794)
T PF08553_consen 581 SCFATTEDGYIAVGS--NKGDIRLYDRL--GK-RAKTALPG-------------------------------LGDPIIGI 624 (794)
T ss_pred eEEEecCCceEEEEe--CCCcEEeeccc--ch-hhhhcCCC-------------------------------CCCCeeEE
Confidence 457788899765555 47899999732 11 00001111 01124789
Q ss_pred EEccCCCEEEEEcCCC
Q psy11412 263 QLSLDGKRIYVSSSLF 278 (290)
Q Consensus 263 a~sPDG~~L~Van~~~ 278 (290)
-.|.||+||+++|.+|
T Consensus 625 Dvt~DGkwilaTc~ty 640 (794)
T PF08553_consen 625 DVTADGKWILATCKTY 640 (794)
T ss_pred EecCCCcEEEEeecce
Confidence 9999999999999854
No 335
>KOG1520|consensus
Probab=78.09 E-value=67 Score=30.86 Aligned_cols=25 Identities=16% Similarity=0.115 Sum_probs=21.0
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCC
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHG 55 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g 55 (290)
+=+.|-+|+|...|.-||+|+..-|
T Consensus 113 ~CGRPLGl~f~~~ggdL~VaDAYlG 137 (376)
T KOG1520|consen 113 LCGRPLGIRFDKKGGDLYVADAYLG 137 (376)
T ss_pred ccCCcceEEeccCCCeEEEEeccee
Confidence 3378999999999999999987654
No 336
>KOG4532|consensus
Probab=77.55 E-value=60 Score=30.00 Aligned_cols=160 Identities=14% Similarity=0.128 Sum_probs=90.1
Q ss_pred eEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceE
Q psy11412 35 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQM 114 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~ 114 (290)
..++++|+|++++.+.+. ...|..|.+++.. +.+-.+... + + ..+-..
T Consensus 161 ~ns~~~snd~~~~~~Vgd-s~~Vf~y~id~~s--ey~~~~~~a--------------------~-------t--~D~gF~ 208 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGD-SRRVFRYAIDDES--EYIENIYEA--------------------P-------T--SDHGFY 208 (344)
T ss_pred eeeeEEcCCCceEEEecC-CCcceEEEeCCcc--ceeeeeEec--------------------c-------c--CCCcee
Confidence 678999999999987764 6789999997632 221112221 0 0 023344
Q ss_pred EEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCC-CceeEEEEccCCC-
Q psy11412 115 FQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPAR-SMVTDILISLDDR- 192 (290)
Q Consensus 115 vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~~~~~i~~SpDGr- 192 (290)
..||.....++|+.. +| .+.++|+..... +++.+.. ..|.+ +..+.+.||+-|-
T Consensus 209 ~S~s~~~~~FAv~~Q---------------dg-~~~I~DVR~~~t--pm~~~ss------trp~hnGa~R~c~Fsl~g~l 264 (344)
T KOG4532|consen 209 NSFSENDLQFAVVFQ---------------DG-TCAIYDVRNMAT--PMAEISS------TRPHHNGAFRVCRFSLYGLL 264 (344)
T ss_pred eeeccCcceEEEEec---------------CC-cEEEEEeccccc--chhhhcc------cCCCCCCceEEEEecCCCcc
Confidence 667777766666654 22 455566544211 1221111 12222 3567789998664
Q ss_pred -EEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCCEE
Q psy11412 193 -YLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRI 271 (290)
Q Consensus 193 -~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~~L 271 (290)
.|+.|. +-+.+.|.|+.+ .+..+.|..-.. +. -.|. ..+-.+-.|+-++.-.
T Consensus 265 DLLf~sE-hfs~~hv~D~R~---~~~~q~I~i~~d------------~~--~~~~---------tq~ifgt~f~~~n~s~ 317 (344)
T KOG4532|consen 265 DLLFISE-HFSRVHVVDTRN---YVNHQVIVIPDD------------VE--RKHN---------TQHIFGTNFNNENESN 317 (344)
T ss_pred eEEEEec-CcceEEEEEccc---CceeeEEecCcc------------cc--cccc---------ccccccccccCCCccc
Confidence 355665 667899988854 233333222110 00 0000 1145667899999999
Q ss_pred EEEcCC
Q psy11412 272 YVSSSL 277 (290)
Q Consensus 272 ~Van~~ 277 (290)
||+|++
T Consensus 318 ~v~~e~ 323 (344)
T KOG4532|consen 318 DVKNEL 323 (344)
T ss_pred ccccch
Confidence 999883
No 337
>KOG1007|consensus
Probab=77.19 E-value=34 Score=31.83 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=26.9
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEecCC
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~ 212 (290)
...++.|.|+-.+..+++-.++-|.+||...+
T Consensus 216 ~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~t 247 (370)
T KOG1007|consen 216 RVRDLDFNPNKQHILVTCGDDGYVRIWDTRKT 247 (370)
T ss_pred eeeeccCCCCceEEEEEcCCCccEEEEeccCC
Confidence 46789999999998888866789999999654
No 338
>KOG1332|consensus
Probab=76.40 E-value=18 Score=32.82 Aligned_cols=29 Identities=17% Similarity=0.148 Sum_probs=25.7
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEe
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDI 209 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv 209 (290)
.....+.+|.-|..|.|+. ++|.|.+|-=
T Consensus 257 ~~~w~vSWS~sGn~LaVs~-GdNkvtlwke 285 (299)
T KOG1332|consen 257 DVVWRVSWSLSGNILAVSG-GDNKVTLWKE 285 (299)
T ss_pred cceEEEEEeccccEEEEec-CCcEEEEEEe
Confidence 3467899999999999999 9999999964
No 339
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=76.12 E-value=5.8 Score=39.81 Aligned_cols=20 Identities=20% Similarity=0.217 Sum_probs=16.6
Q ss_pred cCCCceEEEEccCCCEEEEE
Q psy11412 108 FTGSSQMFQLSLDGKRIYVS 127 (290)
Q Consensus 108 ~g~gPr~vafsPdG~~lYv~ 127 (290)
.++...+++|+|||++|||.
T Consensus 500 ~gaE~tG~~fspDg~tlFvn 519 (524)
T PF05787_consen 500 NGAEITGPCFSPDGRTLFVN 519 (524)
T ss_pred CCcccccceECCCCCEEEEE
Confidence 35667789999999999983
No 340
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=75.66 E-value=13 Score=34.85 Aligned_cols=73 Identities=21% Similarity=0.204 Sum_probs=48.8
Q ss_pred EEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecC
Q psy11412 12 DKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDD 91 (290)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~ 91 (290)
.-||||+..++...= ...+.+|.- - || .||++|.+.|.|..+|.++ ++.+.+..+
T Consensus 187 G~vidv~s~evl~~G--LsmPhSPRW---h-dg-rLwvldsgtGev~~vD~~~-G~~e~Va~v----------------- 241 (335)
T TIGR03032 187 GCVIDIPSGEVVASG--LSMPHSPRW---Y-QG-KLWLLNSGRGELGYVDPQA-GKFQPVAFL----------------- 241 (335)
T ss_pred eEEEEeCCCCEEEcC--ccCCcCCcE---e-CC-eEEEEECCCCEEEEEcCCC-CcEEEEEEC-----------------
Confidence 358999988877542 223444443 2 44 5889999999999888654 334444321
Q ss_pred CCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEc
Q psy11412 92 PELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSS 128 (290)
Q Consensus 92 ~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~n 128 (290)
-+.||+++|. |++++|.-
T Consensus 242 -----------------pG~~rGL~f~--G~llvVgm 259 (335)
T TIGR03032 242 -----------------PGFTRGLAFA--GDFAFVGL 259 (335)
T ss_pred -----------------CCCCccccee--CCEEEEEe
Confidence 1478999999 99999853
No 341
>KOG1517|consensus
Probab=75.59 E-value=75 Score=34.66 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=30.8
Q ss_pred EEEEEecCCCccCCCCCCCCCCC--ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 11 ADKVIDIPAKQVQGYPGGDKVPA--MVTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~v~~--~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
.-++-|..+.++...+ +... .+..+.-+-++.-++++++.+|+|++||..-
T Consensus 1188 ~IRIWDa~~E~~~~di---P~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~ 1240 (1387)
T KOG1517|consen 1188 SIRIWDAHKEQVVADI---PYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRM 1240 (1387)
T ss_pred EEEEEecccceeEeec---ccCCCccceeecccccCCceEEEeecCCceEEeeccc
Confidence 3344455555555544 3333 4444444444444567888999999999864
No 342
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=74.47 E-value=7.7 Score=39.01 Aligned_cols=19 Identities=26% Similarity=0.230 Sum_probs=16.0
Q ss_pred CCCceEEEEccCCCEEEEE
Q psy11412 109 TGSSQMFQLSLDGKRIYVS 127 (290)
Q Consensus 109 g~gPr~vafsPdG~~lYv~ 127 (290)
|+...+.+|||||++|||.
T Consensus 553 g~E~tG~~FspD~~TlFV~ 571 (616)
T COG3211 553 GCEFTGPCFSPDGKTLFVN 571 (616)
T ss_pred cceeecceeCCCCceEEEE
Confidence 4566778999999999985
No 343
>KOG1214|consensus
Probab=73.94 E-value=18 Score=38.12 Aligned_cols=125 Identities=12% Similarity=0.167 Sum_probs=69.0
Q ss_pred CccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCC
Q psy11412 20 KQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPD 99 (290)
Q Consensus 20 ~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~ 99 (290)
++|.-+.+++ .|.+|++++=++-||-++|.-. +|+ +.+..+.|. +.+|.+-+|
T Consensus 1102 rkvLf~tdLV----NPR~iv~D~~rgnLYwtDWnRe-----------nPk-Iets~mDG~---NrRilin~D-------- 1154 (1289)
T KOG1214|consen 1102 RKVLFYTDLV----NPRAIVVDPIRGNLYWTDWNRE-----------NPK-IETSSMDGE---NRRILINTD-------- 1154 (1289)
T ss_pred eeEEEeeccc----CcceEEeecccCceeecccccc-----------CCc-ceeeccCCc---cceEEeecc--------
Confidence 4444444444 7899999999999998887421 121 222333321 122222111
Q ss_pred cceeeccccCCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCC
Q psy11412 100 PVIIKGRRFTGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPAR 179 (290)
Q Consensus 100 ~~~~~~~~~g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 179 (290)
-+-|.++.|.|.-|.|--+..... .+.-+.- +-..++.+. .
T Consensus 1155 ---------igLPNGLtfdpfs~~LCWvDAGt~---------------rleC~~p-~g~gRR~i~--------------~ 1195 (1289)
T KOG1214|consen 1155 ---------IGLPNGLTFDPFSKLLCWVDAGTK---------------RLECTLP-DGTGRRVIQ--------------N 1195 (1289)
T ss_pred ---------cCCCCCceeCcccceeeEEecCCc---------------ceeEecC-CCCcchhhh--------------h
Confidence 146888999999998866543111 1110000 000011111 0
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
+.-+-..+..+++.+|-++|..|.|.-.++.
T Consensus 1196 ~LqYPF~itsy~~~fY~TDWk~n~vvsv~~~ 1226 (1289)
T KOG1214|consen 1196 NLQYPFSITSYADHFYHTDWKRNGVVSVNKH 1226 (1289)
T ss_pred cccCceeeeeccccceeeccccCceEEeecc
Confidence 1123366788999999999999998877764
No 344
>PRK10115 protease 2; Provisional
Probab=73.93 E-value=67 Score=33.34 Aligned_cols=29 Identities=10% Similarity=0.097 Sum_probs=19.1
Q ss_pred eEEEEccCCCEEE-EEeCC----CCcEEEEEecC
Q psy11412 183 TDILISLDDRYLY-TSNWM----HGDIRQYDIRD 211 (290)
Q Consensus 183 ~~i~~SpDGr~Ly-vs~r~----~~~V~v~Dv~d 211 (290)
..+++++||+.|| +.++. ...|..+++.+
T Consensus 175 ~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt 208 (686)
T PRK10115 175 PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGT 208 (686)
T ss_pred eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCC
Confidence 4589999998665 45422 14677777754
No 345
>KOG0270|consensus
Probab=71.31 E-value=1.1e+02 Score=30.03 Aligned_cols=119 Identities=11% Similarity=0.132 Sum_probs=67.8
Q ss_pred CCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCC
Q psy11412 32 PAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGS 111 (290)
Q Consensus 32 ~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~g 111 (290)
+.-+..+.+.|-.-....++..+++|.++|.+++.... ..+... +.
T Consensus 286 ~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~--~~wk~~--------------------------------g~ 331 (463)
T KOG0270|consen 286 GKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSG--KEWKFD--------------------------------GE 331 (463)
T ss_pred CCceeEEEecCCCceEEEeccccceEEeeeccCccccC--ceEEec--------------------------------cc
Confidence 34567788888765555565568999999997632211 112121 45
Q ss_pred ceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCC-CceeEEEEccC
Q psy11412 112 SQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPAR-SMVTDILISLD 190 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~~~~~i~~SpD 190 (290)
..-++++|.....++++.. .+.+.-.|... .+ . ..|.+-.. ...++|.+++.
T Consensus 332 VEkv~w~~~se~~f~~~td---------------dG~v~~~D~R~---~~--~-------~vwt~~AHd~~ISgl~~n~~ 384 (463)
T KOG0270|consen 332 VEKVAWDPHSENSFFVSTD---------------DGTVYYFDIRN---PG--K-------PVWTLKAHDDEISGLSVNIQ 384 (463)
T ss_pred eEEEEecCCCceeEEEecC---------------CceEEeeecCC---CC--C-------ceeEEEeccCCcceEEecCC
Confidence 6667777776666665431 12222122211 00 0 01211111 34567888887
Q ss_pred CCEEEEEeCCCCcEEEEEecC
Q psy11412 191 DRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 191 Gr~Lyvs~r~~~~V~v~Dv~d 211 (290)
-..|.++.-.+..|.+|++..
T Consensus 385 ~p~~l~t~s~d~~Vklw~~~~ 405 (463)
T KOG0270|consen 385 TPGLLSTASTDKVVKLWKFDV 405 (463)
T ss_pred CCcceeeccccceEEEEeecC
Confidence 777777776789999999964
No 346
>KOG0281|consensus
Probab=71.19 E-value=21 Score=34.02 Aligned_cols=28 Identities=21% Similarity=0.305 Sum_probs=19.6
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
.+..+.| |.+++. +..++.+|.+|+++.
T Consensus 322 aVNvVdf--d~kyIV-sASgDRTikvW~~st 349 (499)
T KOG0281|consen 322 AVNVVDF--DDKYIV-SASGDRTIKVWSTST 349 (499)
T ss_pred heeeecc--ccceEE-EecCCceEEEEeccc
Confidence 4555555 456665 445799999999865
No 347
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=71.08 E-value=17 Score=23.95 Aligned_cols=31 Identities=13% Similarity=0.205 Sum_probs=27.0
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEc
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHGDIRQYDI 62 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv 62 (290)
++..+..+.++|....|+++.. +|.|.+|++
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~-~g~v~v~Rl 40 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTE-DGEVLVYRL 40 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEEC-CCeEEEEEC
Confidence 4556778999999999999885 899999998
No 348
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=70.91 E-value=19 Score=33.58 Aligned_cols=21 Identities=33% Similarity=0.373 Sum_probs=14.3
Q ss_pred ceeEEEEccCCCEEEEEeCCC
Q psy11412 181 MVTDILISLDDRYLYTSNWMH 201 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~ 201 (290)
...++..++||+++.|+.+++
T Consensus 146 s~~~~~r~~dG~~vavs~~G~ 166 (302)
T PF14870_consen 146 SINDITRSSDGRYVAVSSRGN 166 (302)
T ss_dssp -EEEEEE-TTS-EEEEETTSS
T ss_pred eeEeEEECCCCcEEEEECccc
Confidence 356678899999999998653
No 349
>COG4676 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.45 E-value=26 Score=31.08 Aligned_cols=80 Identities=14% Similarity=0.116 Sum_probs=46.0
Q ss_pred EEEccCCCEE--EEEeCCCCcEEEEEecCCCCceEeeEEeeCc-eecCCCc-eEEecCCCCCCCCCcceeecccccCCcc
Q psy11412 185 ILISLDDRYL--YTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG-KIQSDSG-VTVIDDPELDKQPDPVIIKGRRFTGSSQ 260 (290)
Q Consensus 185 i~~SpDGr~L--yvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg-~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (290)
+.+..||+|. |+=..++|+|.|-.- +....++++.+.++. +.+.--. |.-||.+.. .-.
T Consensus 95 l~~d~dG~F~RPyaFg~GSNsVeV~sa-dG~~rqRvQFY~~~~g~~~arlRvvLsWD~d~t----------------dlD 157 (268)
T COG4676 95 LRIDSDGSFARPYAFGEGSNSVEVRSA-DGQSRQRVQFYETNAGKTRARLRVVLSWDTDNT----------------DLD 157 (268)
T ss_pred eeecCCCceecceeccCCCCceEEECC-CcchhheEEEEecCCCccCceEEEEEEECCCCC----------------cee
Confidence 5667788874 454457788877643 222234677776642 2111111 222554321 234
Q ss_pred eEEEccCCCEEEEEcCCCCCC
Q psy11412 261 MFQLSLDGKRIYVSSSLFSPW 281 (290)
Q Consensus 261 ~~a~sPDG~~L~Van~~~~~~ 281 (290)
.=.++|||...|=+|..+++=
T Consensus 158 lHvvtPdG~Hawygn~~lsng 178 (268)
T COG4676 158 LHVVTPDGDHAWYGNPVLSNG 178 (268)
T ss_pred EEEecCCCceeeecCceecCC
Confidence 557899999999998877764
No 350
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=70.23 E-value=16 Score=34.27 Aligned_cols=58 Identities=16% Similarity=0.209 Sum_probs=40.4
Q ss_pred CCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEEEccCCC
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGK 269 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a~sPDG~ 269 (290)
|| .||++|.+.+.|..+|.. .++...+.++ .| .|++++|- |+
T Consensus 212 dg-rLwvldsgtGev~~vD~~-~G~~e~Va~v--pG--------------------------------~~rGL~f~--G~ 253 (335)
T TIGR03032 212 QG-KLWLLNSGRGELGYVDPQ-AGKFQPVAFL--PG--------------------------------FTRGLAFA--GD 253 (335)
T ss_pred CC-eEEEEECCCCEEEEEcCC-CCcEEEEEEC--CC--------------------------------CCccccee--CC
Confidence 45 579999999999888763 3444455433 23 78999999 99
Q ss_pred EEEEEcCCCCCCCcccCC
Q psy11412 270 RIYVSSSLFSPWDKEIYP 287 (290)
Q Consensus 270 ~L~Van~~~~~~~~~~~~ 287 (290)
+|+|+-+ ++++...+.
T Consensus 254 llvVgmS--k~R~~~~f~ 269 (335)
T TIGR03032 254 FAFVGLS--KLRESRVFG 269 (335)
T ss_pred EEEEEec--cccCCCCcC
Confidence 9999755 677444333
No 351
>KOG0270|consensus
Probab=69.52 E-value=1.2e+02 Score=29.77 Aligned_cols=59 Identities=14% Similarity=0.124 Sum_probs=41.2
Q ss_pred EEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceEEE
Q psy11412 37 DILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQ 116 (290)
Q Consensus 37 ~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~va 116 (290)
.+++.-.-|-+.++...+.+|.+||++. +.++.+ +... |..+..+.
T Consensus 248 ~Ls~n~~~~nVLaSgsaD~TV~lWD~~~-g~p~~s--~~~~-------------------------------~k~Vq~l~ 293 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGSADKTVKLWDVDT-GKPKSS--ITHH-------------------------------GKKVQTLE 293 (463)
T ss_pred HHHhccccceeEEecCCCceEEEEEcCC-CCccee--hhhc-------------------------------CCceeEEE
Confidence 4566666677777877899999999976 445443 1111 25677899
Q ss_pred EccCCCEEEEEcC
Q psy11412 117 LSLDGKRIYVSSS 129 (290)
Q Consensus 117 fsPdG~~lYv~ne 129 (290)
|+|.....-+++.
T Consensus 294 wh~~~p~~LLsGs 306 (463)
T KOG0270|consen 294 WHPYEPSVLLSGS 306 (463)
T ss_pred ecCCCceEEEecc
Confidence 9999877777665
No 352
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=69.49 E-value=1.5e+02 Score=31.09 Aligned_cols=98 Identities=15% Similarity=0.072 Sum_probs=54.1
Q ss_pred CCceEEEEccCCCEEEEEcCCCCCcceeecccc-c-----CCCceeecceeeeeeecccccccCccccCccccCCCCcee
Q psy11412 110 GSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDL-V-----KTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVT 183 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~-~-----~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~ 183 (290)
-.+++|.++|+|+.|.+++. ..+.+...|.. . .+|... +. -++.+.+..-- .-.......
T Consensus 85 f~v~~i~~n~~g~~lal~G~--~~v~V~~LP~r~g~~~~~~~g~~~--i~---------Crt~~v~~~~~-~~~~~~~i~ 150 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGP--RGVVVLELPRRWGKNGEFEDGKKE--IN---------CRTVPVDERFF-TSNSSLEIK 150 (717)
T ss_pred eeEEEEEECCCCCEEEEEcC--CcEEEEEeccccCccccccCCCcc--ee---------EEEEEechhhc-cCCCCceEE
Confidence 36889999999999999877 33333332220 0 111110 00 01111110000 000112455
Q ss_pred EEEEccC---CCEEEEEeCCCCcEEEEEecCCCCceEeeEEe
Q psy11412 184 DILISLD---DRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIF 222 (290)
Q Consensus 184 ~i~~SpD---Gr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~ 222 (290)
.+.++|. +..|.+=. .+|++++||+.++.++..+..+.
T Consensus 151 qv~WhP~s~~~~~l~vLt-sdn~lR~y~~~~~~~p~~v~~~~ 191 (717)
T PF10168_consen 151 QVRWHPWSESDSHLVVLT-SDNTLRLYDISDPQHPWQVLSLS 191 (717)
T ss_pred EEEEcCCCCCCCeEEEEe-cCCEEEEEecCCCCCCeEEEEcc
Confidence 6778876 57777755 68999999998877776655443
No 353
>KOG1524|consensus
Probab=69.41 E-value=1.1e+02 Score=30.91 Aligned_cols=24 Identities=25% Similarity=0.091 Sum_probs=19.2
Q ss_pred EEEcCCCCEEEEEeCCCCeEEEEEc
Q psy11412 38 ILISLDDRYLYTSNWMHGDIRQYDI 62 (290)
Q Consensus 38 va~SpDGr~Lyva~~~~g~V~v~dv 62 (290)
--.+|||.-|.+++. +|.|.+|.-
T Consensus 110 gRW~~dGtgLlt~GE-DG~iKiWSr 133 (737)
T KOG1524|consen 110 GRWSPDGAGLLTAGE-DGVIKIWSR 133 (737)
T ss_pred cccCCCCceeeeecC-CceEEEEec
Confidence 357899999987764 889999975
No 354
>KOG2395|consensus
Probab=69.08 E-value=57 Score=32.84 Aligned_cols=21 Identities=19% Similarity=0.400 Sum_probs=17.6
Q ss_pred CcceEEEccCCCEEEEEcCCC
Q psy11412 258 SSQMFQLSLDGKRIYVSSSLF 278 (290)
Q Consensus 258 ~P~~~a~sPDG~~L~Van~~~ 278 (290)
-.-++..+.||+++.++|.+|
T Consensus 473 ~I~hVdvtadGKwil~Tc~ty 493 (644)
T KOG2395|consen 473 AIKHVDVTADGKWILATCKTY 493 (644)
T ss_pred ceeeEEeeccCcEEEEecccE
Confidence 457799999999999998854
No 355
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=68.96 E-value=72 Score=27.15 Aligned_cols=24 Identities=25% Similarity=0.470 Sum_probs=20.3
Q ss_pred EccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 187 ISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 187 ~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
+..+|..||+.+ .++.|..||+.+
T Consensus 208 ~~~~~~~l~~~~-~~~~l~~~d~~t 231 (238)
T PF13360_consen 208 PSVDGGTLYVTS-SDGRLYALDLKT 231 (238)
T ss_dssp EECCCTEEEEEE-TTTEEEEEETTT
T ss_pred ceeeCCEEEEEe-CCCEEEEEECCC
Confidence 567899999998 689999999854
No 356
>KOG4640|consensus
Probab=68.84 E-value=9.8 Score=38.58 Aligned_cols=45 Identities=22% Similarity=0.309 Sum_probs=35.9
Q ss_pred eeEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCC
Q psy11412 9 YKADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTA 66 (290)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~ 66 (290)
||+-++|++|...+. ..++..|||+.|+|+- .+|+|++.|++.+.
T Consensus 51 ~qRlwtip~p~~~v~------------~sL~W~~DGkllaVg~-kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 51 WQRLWTIPIPGENVT------------ASLCWRPDGKLLAVGF-KDGTIRLHDVEKGG 95 (665)
T ss_pred cceeEeccCCCCccc------------eeeeecCCCCEEEEEe-cCCeEEEEEccCCC
Confidence 898888888864422 4679999999998874 57999999997643
No 357
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=66.58 E-value=24 Score=34.83 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=25.3
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
+...+..+-+.||||+||+-+. .++.++++.+
T Consensus 219 ~~~~v~qllL~Pdg~~LYv~~g--~~~~v~~L~~ 250 (733)
T COG4590 219 PFSDVSQLLLTPDGKTLYVRTG--SELVVALLDK 250 (733)
T ss_pred CccchHhhEECCCCCEEEEecC--CeEEEEeecc
Confidence 3445557889999999999875 6889999864
No 358
>KOG4547|consensus
Probab=66.57 E-value=1.1e+02 Score=30.70 Aligned_cols=116 Identities=14% Similarity=0.100 Sum_probs=65.0
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCC
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTG 110 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~ 110 (290)
-++.+..+.-+.+=..+|+++ ++..|-.|+..+ ...+..+..+ ..
T Consensus 101 h~~~v~~~~~~~~~~ciyS~~-ad~~v~~~~~~~---~~~~~~~~~~-------------------------------~~ 145 (541)
T KOG4547|consen 101 HYGNVNEILDAQRLGCIYSVG-ADLKVVYILEKE---KVIIRIWKEQ-------------------------------KP 145 (541)
T ss_pred CCCcceeeecccccCceEecC-CceeEEEEeccc---ceeeeeeccC-------------------------------CC
Confidence 344455555566667777665 467787887654 2222222221 13
Q ss_pred CceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEccC
Q psy11412 111 SSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISLD 190 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~SpD 190 (290)
.+..++.+|||+.|.+++. .+..++.. ....+.++ +| .++..+-+.|.-+
T Consensus 146 ~~~sl~is~D~~~l~~as~------------------~ik~~~~~---~kevv~~f-----tg----h~s~v~t~~f~~~ 195 (541)
T KOG4547|consen 146 LVSSLCISPDGKILLTASR------------------QIKVLDIE---TKEVVITF-----TG----HGSPVRTLSFTTL 195 (541)
T ss_pred ccceEEEcCCCCEEEeccc------------------eEEEEEcc---CceEEEEe-----cC----CCcceEEEEEEEe
Confidence 5777999999999998654 22222221 12233321 12 1233445666666
Q ss_pred -----CCEEEEEeCCCCcEEEEEecC
Q psy11412 191 -----DRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 191 -----Gr~Lyvs~r~~~~V~v~Dv~d 211 (290)
|+++..+.-.+.-+.+|-+..
T Consensus 196 ~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 196 IDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred ccccccceeeeccccccceeEEEEEc
Confidence 888776665666788887743
No 359
>KOG0641|consensus
Probab=65.56 E-value=1e+02 Score=27.72 Aligned_cols=62 Identities=19% Similarity=0.285 Sum_probs=44.2
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCc
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSS 259 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P 259 (290)
..++++++.|.||.|. +...+.+-.+|||.- .+.++++- ||. ...
T Consensus 232 savaav~vdpsgrll~-sg~~dssc~lydirg---~r~iq~f~----------------------phs---------adi 276 (350)
T KOG0641|consen 232 SAVAAVAVDPSGRLLA-SGHADSSCMLYDIRG---GRMIQRFH----------------------PHS---------ADI 276 (350)
T ss_pred ceeEEEEECCCcceee-eccCCCceEEEEeeC---CceeeeeC----------------------CCc---------cce
Confidence 4688899999999875 444788899999952 34555431 111 146
Q ss_pred ceEEEccCCCEEEEEcC
Q psy11412 260 QMFQLSLDGKRIYVSSS 276 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~ 276 (290)
|.+-|||...+|+.++-
T Consensus 277 r~vrfsp~a~yllt~sy 293 (350)
T KOG0641|consen 277 RCVRFSPGAHYLLTCSY 293 (350)
T ss_pred eEEEeCCCceEEEEecc
Confidence 88999999888888753
No 360
>KOG1587|consensus
Probab=63.85 E-value=23 Score=35.87 Aligned_cols=88 Identities=16% Similarity=0.140 Sum_probs=55.1
Q ss_pred CceeEEEEEec-CCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCc
Q psy11412 7 GTYKADKVIDI-PAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSG 85 (290)
Q Consensus 7 ~~~~~~~~~~~-~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~ 85 (290)
|+|....+-.- .+...-.+. -=..+..+++.||..-.++++..++|.|.+||+... ....+..+..+.
T Consensus 418 gDW~vriWs~~~~~~Pl~~~~---~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~-~~~Pv~s~~~~~------- 486 (555)
T KOG1587|consen 418 GDWTVRIWSEDVIASPLLSLD---SSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD-DEEPVLSQKVCS------- 486 (555)
T ss_pred ccceeEeccccCCCCcchhhh---hccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc-ccCCcccccccc-------
Confidence 66766655444 232222221 113358899999999999999888999999999542 122222222210
Q ss_pred eEEecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcC
Q psy11412 86 VTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 86 ~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~ne 129 (290)
.--..+.+++.|+.|.+.+.
T Consensus 487 ------------------------~~l~~~~~s~~g~~lavGd~ 506 (555)
T KOG1587|consen 487 ------------------------PALTRVRWSPNGKLLAVGDA 506 (555)
T ss_pred ------------------------cccceeecCCCCcEEEEecC
Confidence 12344778888999999776
No 361
>KOG1310|consensus
Probab=63.28 E-value=73 Score=32.26 Aligned_cols=41 Identities=17% Similarity=0.108 Sum_probs=30.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecc
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 78 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~ 78 (290)
-+..+..+.||.+|++.. .+-.+.|||... -+.+..|.+|+
T Consensus 52 CVN~LeWn~dG~lL~SGS-DD~r~ivWd~~~---~KllhsI~TgH 92 (758)
T KOG1310|consen 52 CVNCLEWNADGELLASGS-DDTRLIVWDPFE---YKLLHSISTGH 92 (758)
T ss_pred eecceeecCCCCEEeecC-CcceEEeecchh---cceeeeeeccc
Confidence 467899999999997554 567899999753 45555666664
No 362
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=63.24 E-value=22 Score=23.20 Aligned_cols=28 Identities=21% Similarity=0.177 Sum_probs=21.7
Q ss_pred eeEEEEccCCC---EEEEEeCCCCcEEEEEec
Q psy11412 182 VTDILISLDDR---YLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 182 ~~~i~~SpDGr---~Lyvs~r~~~~V~v~Dv~ 210 (290)
.+.+.|||+.. .|+.+. ..+.|.++|+.
T Consensus 3 vR~~kFsP~~~~~DLL~~~E-~~g~vhi~D~R 33 (43)
T PF10313_consen 3 VRCCKFSPEPGGNDLLAWAE-HQGRVHIVDTR 33 (43)
T ss_pred eEEEEeCCCCCcccEEEEEc-cCCeEEEEEcc
Confidence 45689998655 776666 78999999985
No 363
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=63.07 E-value=43 Score=34.08 Aligned_cols=87 Identities=11% Similarity=0.040 Sum_probs=62.1
Q ss_pred EEEEEecCCCccCCCCCCCCCCC--ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEE
Q psy11412 11 ADKVIDIPAKQVQGYPGGDKVPA--MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTV 88 (290)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~v~~--~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v 88 (290)
++=|+..-.++|.... .+.+++ -|-=+||+|..+.++||.-.-+.|.||.+.. .....+.+|.+.
T Consensus 316 ShLvLVtfe~~VT~tr-KV~IPGILvPDliAfn~kaq~VAVASNTcn~ilVYSv~~-s~mPniQqIqLe----------- 382 (671)
T PF15390_consen 316 SHLVLVTFERKVTTTR-KVSIPGILVPDLIAFNPKAQVVAVASNTCNIILVYSVTP-SSMPNIQQIQLE----------- 382 (671)
T ss_pred eeEEEEEeecceEEee-eeccccccccceeeeCCcCCEEEEEecCCcEEEEEEecc-ccCCCeeEEEcc-----------
Confidence 3444444445555544 445666 5667999999999999987889999999975 445555666553
Q ss_pred ecCCCCcCCCCcceeeccccCCCceEEEEccCCCEEEEEcC
Q psy11412 89 IDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~~lYv~ne 129 (290)
.+..|-++.|--|+-.|..++.
T Consensus 383 -------------------~~ERPKGiCFltdklLLilVGk 404 (671)
T PF15390_consen 383 -------------------SNERPKGICFLTDKLLLILVGK 404 (671)
T ss_pred -------------------cCCCCceeeEccCCeEEEEecc
Confidence 1257888999999888888765
No 364
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=61.37 E-value=40 Score=21.97 Aligned_cols=30 Identities=20% Similarity=0.106 Sum_probs=22.7
Q ss_pred ceEEEEEcCCCC---EEEEEeCCCCeEEEEEcCC
Q psy11412 34 MVTDILISLDDR---YLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr---~Lyva~~~~g~V~v~dv~d 64 (290)
....+.|||+.. .|+.+ ...|.|.++|+..
T Consensus 2 AvR~~kFsP~~~~~DLL~~~-E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 2 AVRCCKFSPEPGGNDLLAWA-EHQGRVHIVDTRS 34 (43)
T ss_pred CeEEEEeCCCCCcccEEEEE-ccCCeEEEEEccc
Confidence 457889998655 66555 5689999999873
No 365
>KOG1517|consensus
Probab=61.31 E-value=2.6e+02 Score=30.83 Aligned_cols=88 Identities=17% Similarity=0.225 Sum_probs=45.5
Q ss_pred EEEEEeCCCCcEEEEEecCCCC--ce--------E--eeEEee---C--ce--ecCCCceEEecCCCCCC-CCCcceeec
Q psy11412 193 YLYTSNWMHGDIRQYDIRDTAH--PV--------L--VGQIFL---G--GK--IQSDSGVTVIDDPELDK-QPDPVIIKG 252 (290)
Q Consensus 193 ~Lyvs~r~~~~V~v~Dv~d~~~--~~--------~--v~~i~~---G--g~--~~~~~~v~~~~~~~~~~-~~~~~~~~~ 252 (290)
-+.+++..+|+|.+||..-+.. +. . |-.+.. | .. .+.+|.|.++|.....+ .+. ....-
T Consensus 1222 n~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~-~iv~~ 1300 (1387)
T KOG1517|consen 1222 NIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFL-TIVAH 1300 (1387)
T ss_pred ceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccc-eeeec
Confidence 3556666999999999842111 10 1 111111 1 11 15677788888654211 111 01111
Q ss_pred ccccCCcceEEEccCCCEEEEEc-CCCCCC
Q psy11412 253 RRFTGSSQMFQLSLDGKRIYVSS-SLFSPW 281 (290)
Q Consensus 253 ~~~~~~P~~~a~sPDG~~L~Van-~~~~~~ 281 (290)
+..|+.-..|...++-..++.++ +.++-|
T Consensus 1301 ~~yGs~lTal~VH~hapiiAsGs~q~ikIy 1330 (1387)
T KOG1517|consen 1301 WEYGSALTALTVHEHAPIIASGSAQLIKIY 1330 (1387)
T ss_pred cccCccceeeeeccCCCeeeecCcceEEEE
Confidence 11133356788888888888877 344444
No 366
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=57.44 E-value=28 Score=35.17 Aligned_cols=18 Identities=6% Similarity=0.243 Sum_probs=16.0
Q ss_pred CCceEEEEccCCCEEEEE
Q psy11412 110 GSSQMFQLSLDGKRIYVS 127 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~ 127 (290)
..|+.++++|.-..+|++
T Consensus 417 dRpE~i~~~p~~g~Vy~~ 434 (616)
T COG3211 417 DRPEWIAVNPGTGEVYFT 434 (616)
T ss_pred cCccceeecCCcceEEEE
Confidence 478999999999899986
No 367
>KOG1240|consensus
Probab=57.00 E-value=1.7e+02 Score=32.48 Aligned_cols=30 Identities=27% Similarity=0.434 Sum_probs=25.7
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
+.+..++++|-+.+|..++ ..|.+.+||+.
T Consensus 1196 G~vTSi~idp~~~WlviGt-s~G~l~lWDLR 1225 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWLVIGT-SRGQLVLWDLR 1225 (1431)
T ss_pred cceeEEEecCCceEEEEec-CCceEEEEEee
Confidence 5678899999999988776 67889999993
No 368
>PRK13614 lipoprotein LpqB; Provisional
Probab=55.91 E-value=2.4e+02 Score=28.77 Aligned_cols=31 Identities=10% Similarity=0.023 Sum_probs=21.7
Q ss_pred CceeEEEEccCCCEEEEEeC--CCCcEEEEEec
Q psy11412 180 SMVTDILISLDDRYLYTSNW--MHGDIRQYDIR 210 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r--~~~~V~v~Dv~ 210 (290)
....++.+|+||-++.+-.+ +..+|.|--|.
T Consensus 434 ~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~ 466 (573)
T PRK13614 434 RTVKELRVSREGVRALVISEQNGKSRVQVAGIV 466 (573)
T ss_pred CeeEEEEECCCccEEEEEEEeCCccEEEEEEEE
Confidence 34788999999999886442 33447776563
No 369
>KOG4714|consensus
Probab=55.74 E-value=14 Score=33.78 Aligned_cols=68 Identities=18% Similarity=0.178 Sum_probs=45.8
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCce
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQ 113 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr 113 (290)
.+..++-.|--..+..++.++|.|.+||.+..+.|..+ +... . +.-.
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~--l~ah----------------------k---------~~i~ 227 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSL--LKAH----------------------K---------AEIW 227 (319)
T ss_pred cchhhhCCcccccEEEEecCCCeEEEEEcccccchHHH--HHHh----------------------h---------hhhh
Confidence 37778888888888888888999999998764322211 0110 0 2345
Q ss_pred EEEEccC-CCEEEEEcCCCCCc
Q psy11412 114 MFQLSLD-GKRIYVSSSLFSPW 134 (290)
Q Consensus 114 ~vafsPd-G~~lYv~nel~~~~ 134 (290)
.+-|||. +..|++++|.++.|
T Consensus 228 eV~FHpk~p~~Lft~sedGslw 249 (319)
T KOG4714|consen 228 EVHFHPKNPEHLFTCSEDGSLW 249 (319)
T ss_pred heeccCCCchheeEecCCCcEE
Confidence 5889985 68899988854444
No 370
>KOG1645|consensus
Probab=55.05 E-value=38 Score=32.80 Aligned_cols=78 Identities=22% Similarity=0.246 Sum_probs=45.7
Q ss_pred CCCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEc
Q psy11412 109 TGSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILIS 188 (290)
Q Consensus 109 g~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~S 188 (290)
|...|.++|||..+=|.+...+++.+. +.+..+...+.+ .-.++.+-.+++.
T Consensus 193 g~~IrdlafSp~~~GLl~~asl~nkik------------------i~dlet~~~vss----------y~a~~~~wSC~wD 244 (463)
T KOG1645|consen 193 GSFIRDLAFSPFNEGLLGLASLGNKIK------------------IMDLETSCVVSS----------YIAYNQIWSCCWD 244 (463)
T ss_pred chhhhhhccCccccceeeeeccCceEE------------------EEecccceeeeh----------eeccCCceeeeec
Confidence 456889999999985555444333222 222111111111 0012344457777
Q ss_pred cCCC-EEEEEeCCCCcEEEEEecCCCCc
Q psy11412 189 LDDR-YLYTSNWMHGDIRQYDIRDTAHP 215 (290)
Q Consensus 189 pDGr-~Lyvs~r~~~~V~v~Dv~d~~~~ 215 (290)
-|.+ ++|+.. .+|.|.|||+..+..+
T Consensus 245 lde~h~IYaGl-~nG~VlvyD~R~~~~~ 271 (463)
T KOG1645|consen 245 LDERHVIYAGL-QNGMVLVYDMRQPEGP 271 (463)
T ss_pred cCCcceeEEec-cCceEEEEEccCCCch
Confidence 7654 578887 7899999999876553
No 371
>KOG2079|consensus
Probab=53.46 E-value=47 Score=36.04 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=27.8
Q ss_pred CCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 31 VPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 31 v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
+.+.+..++|+.||++|. +++++|-|.+||...
T Consensus 129 v~~~Vtsvafn~dg~~l~-~G~~~G~V~v~D~~~ 161 (1206)
T KOG2079|consen 129 VQGPVTSVAFNQDGSLLL-AGLGDGHVTVWDMHR 161 (1206)
T ss_pred cCCcceeeEecCCCceec-cccCCCcEEEEEccC
Confidence 455678999999999996 667899999999865
No 372
>KOG0642|consensus
Probab=52.60 E-value=50 Score=33.18 Aligned_cols=29 Identities=17% Similarity=0.414 Sum_probs=24.5
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIR 63 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~ 63 (290)
-+-.+++++.+..+|.++ -+|+|++|++.
T Consensus 346 PVl~v~v~~n~~~~ysgg-~Dg~I~~w~~p 374 (577)
T KOG0642|consen 346 PVLCVVVPSNGEHCYSGG-IDGTIRCWNLP 374 (577)
T ss_pred ceEEEEecCCceEEEeec-cCceeeeeccC
Confidence 345799999999999876 48999999774
No 373
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=50.90 E-value=64 Score=26.36 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=23.8
Q ss_pred EEEccCCCEEEEEeCCCCcEEEEEecCCC-CceEeeEEee
Q psy11412 185 ILISLDDRYLYTSNWMHGDIRQYDIRDTA-HPVLVGQIFL 223 (290)
Q Consensus 185 i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~-~~~~v~~i~~ 223 (290)
-.+.+|-..||.+++|+++|..|.+.+.. ....+.+...
T Consensus 16 P~yD~dt~llyl~gKGD~~ir~yEv~~~~p~l~~l~~~~s 55 (136)
T PF08954_consen 16 PFYDEDTNLLYLAGKGDGNIRYYEVSDESPYLHYLSEYRS 55 (136)
T ss_dssp EEE-TTT-EEEEEETT-S-EEEEEE-SSTTSEEEEEEE--
T ss_pred eeEcCCCCEEEEEeccCcEEEEEEEcCCCCceEEcccccc
Confidence 46889999999999999999999996532 2333444433
No 374
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=50.64 E-value=71 Score=29.98 Aligned_cols=27 Identities=11% Similarity=-0.002 Sum_probs=23.6
Q ss_pred eEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 183 TDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 183 ~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
-+|+++|-| .+||++-+.+...+||..
T Consensus 26 WGia~~p~~-~~WVadngT~~~TlYdg~ 52 (336)
T TIGR03118 26 WGLSYRPGG-PFWVANTGTGTATLYVGN 52 (336)
T ss_pred ceeEecCCC-CEEEecCCcceEEeecCC
Confidence 469999987 779999899999999985
No 375
>KOG1009|consensus
Probab=50.58 E-value=58 Score=31.51 Aligned_cols=28 Identities=18% Similarity=0.204 Sum_probs=22.8
Q ss_pred eeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 182 VTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 182 ~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
...|.|+|+|..|..+. .++.|.+|-..
T Consensus 68 VN~vRf~p~gelLASg~-D~g~v~lWk~~ 95 (434)
T KOG1009|consen 68 VNVVRFSPDGELLASGG-DGGEVFLWKQG 95 (434)
T ss_pred eEEEEEcCCcCeeeecC-CCceEEEEEec
Confidence 45699999999987666 67899999765
No 376
>KOG4499|consensus
Probab=50.49 E-value=42 Score=30.47 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=37.1
Q ss_pred EEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCceeeeEEee
Q psy11412 11 ADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFL 76 (290)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~ 76 (290)
++-++|+...+-...+ .|-+++++-+| .|||+.+.+++|..+|.. +.+++.++.+
T Consensus 197 r~~i~dlrk~~~~e~~-------~PDGm~ID~eG-~L~Va~~ng~~V~~~dp~---tGK~L~eikl 251 (310)
T KOG4499|consen 197 RKVIFDLRKSQPFESL-------EPDGMTIDTEG-NLYVATFNGGTVQKVDPT---TGKILLEIKL 251 (310)
T ss_pred cceeEEeccCCCcCCC-------CCCcceEccCC-cEEEEEecCcEEEEECCC---CCcEEEEEEc
Confidence 3445666665433333 57788887655 589999999999888754 4666666554
No 377
>KOG2321|consensus
Probab=49.44 E-value=22 Score=35.87 Aligned_cols=31 Identities=29% Similarity=0.477 Sum_probs=27.3
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
....|.+||||++|.+++-..=.|.+||+++
T Consensus 53 ast~ik~s~DGqY~lAtG~YKP~ikvydlan 83 (703)
T KOG2321|consen 53 ASTRIKVSPDGQYLLATGTYKPQIKVYDLAN 83 (703)
T ss_pred ccceeEecCCCcEEEEecccCCceEEEEccc
Confidence 4567999999999999987888999999975
No 378
>KOG4532|consensus
Probab=48.35 E-value=1.2e+02 Score=28.13 Aligned_cols=18 Identities=11% Similarity=-0.071 Sum_probs=15.7
Q ss_pred ceEEEEccCCCEEEEEcC
Q psy11412 112 SQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 112 Pr~vafsPdG~~lYv~ne 129 (290)
..+.++|+|++++.+++.
T Consensus 161 ~ns~~~snd~~~~~~Vgd 178 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGD 178 (344)
T ss_pred eeeeEEcCCCceEEEecC
Confidence 567899999999999875
No 379
>PRK13613 lipoprotein LpqB; Provisional
Probab=48.12 E-value=3.2e+02 Score=27.99 Aligned_cols=29 Identities=7% Similarity=-0.048 Sum_probs=19.5
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEc
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDI 62 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv 62 (290)
.+.++++|+||+.+++.+...-.+.+-.+
T Consensus 364 ~~~s~avS~~g~~~A~v~~~~~~l~vg~~ 392 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISADGDSVYVGSL 392 (599)
T ss_pred CccceEEcCCCceEEEEcCCCcEEEEecc
Confidence 56789999999888776543334544443
No 380
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=47.63 E-value=33 Score=21.17 Aligned_cols=20 Identities=15% Similarity=0.282 Sum_probs=15.6
Q ss_pred CCCEEEEEeCCCCeEEEEEcC
Q psy11412 43 DDRYLYTSNWMHGDIRQYDIR 63 (290)
Q Consensus 43 DGr~Lyva~~~~g~V~v~dv~ 63 (290)
++.+||+.+. +|.|.++|.+
T Consensus 20 ~~g~vyv~~~-dg~l~ald~~ 39 (40)
T PF13570_consen 20 AGGRVYVGTG-DGNLYALDAA 39 (40)
T ss_dssp CTSEEEEE-T-TSEEEEEETT
T ss_pred ECCEEEEEcC-CCEEEEEeCC
Confidence 4678999986 8999999864
No 381
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=45.33 E-value=1.7e+02 Score=27.28 Aligned_cols=21 Identities=14% Similarity=0.300 Sum_probs=16.4
Q ss_pred CCCEEEEEeCCCCeEEEEEcCC
Q psy11412 43 DDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 43 DGr~Lyva~~~~g~V~v~dv~d 64 (290)
+|.+||+.+. +|.|..||..+
T Consensus 64 ~~~~v~v~~~-~g~v~a~d~~t 84 (377)
T TIGR03300 64 AGGKVYAADA-DGTVVALDAET 84 (377)
T ss_pred ECCEEEEECC-CCeEEEEEccC
Confidence 4678988875 68999999765
No 382
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=44.46 E-value=3.2e+02 Score=26.88 Aligned_cols=32 Identities=9% Similarity=0.148 Sum_probs=21.7
Q ss_pred CCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCc
Q psy11412 190 DDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 225 (290)
Q Consensus 190 DGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg 225 (290)
.|..||+.+ .++.|..+|..+ .+++-+..+++
T Consensus 405 ~g~~v~~g~-~dG~l~ald~~t---G~~lW~~~~~~ 436 (488)
T cd00216 405 AGNLVFAGA-ADGYFRAFDATT---GKELWKFRTPS 436 (488)
T ss_pred cCCeEEEEC-CCCeEEEEECCC---CceeeEEECCC
Confidence 567899988 688898888743 34444455544
No 383
>PRK13615 lipoprotein LpqB; Provisional
Probab=43.99 E-value=1.8e+02 Score=29.59 Aligned_cols=19 Identities=26% Similarity=0.385 Sum_probs=12.3
Q ss_pred CceEEEEccCCCEEEEEcC
Q psy11412 111 SSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~ne 129 (290)
.+.++++|+||+.+.+.+.
T Consensus 335 ~~~s~avS~dg~~~A~v~~ 353 (557)
T PRK13615 335 QADAATLSADGRQAAVRNA 353 (557)
T ss_pred ccccceEcCCCceEEEEcC
Confidence 3456777777777666543
No 384
>KOG0974|consensus
Probab=43.31 E-value=67 Score=34.44 Aligned_cols=31 Identities=29% Similarity=0.460 Sum_probs=26.4
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
+.+..|.+|-||++++... .+.++++|+|.+
T Consensus 176 G~iF~i~~s~dg~~i~s~S-dDRsiRlW~i~s 206 (967)
T KOG0974|consen 176 GSIFSIVTSLDGRYIASVS-DDRSIRLWPIDS 206 (967)
T ss_pred CceEEEEEccCCcEEEEEe-cCcceeeeeccc
Confidence 4578899999999998666 788999999975
No 385
>KOG1645|consensus
Probab=40.85 E-value=78 Score=30.73 Aligned_cols=56 Identities=20% Similarity=0.250 Sum_probs=41.1
Q ss_pred eEEEEEecCCCccCCCCCCCCCCCceEEEEEcCCCCEEEEEeCCCCeEEEEEcCCCCCc
Q psy11412 10 KADKVIDIPAKQVQGYPGGDKVPAMVTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHP 68 (290)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~v~~~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~~~~ 68 (290)
+.-+++|++..-++..- .++..+++++++-|.+...=+++..|.|.+||.+.+..+
T Consensus 216 nkiki~dlet~~~vssy---~a~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~~ 271 (463)
T KOG1645|consen 216 NKIKIMDLETSCVVSSY---IAYNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEGP 271 (463)
T ss_pred ceEEEEecccceeeehe---eccCCceeeeeccCCcceeEEeccCceEEEEEccCCCch
Confidence 34578888877666654 467788999999886554445667899999999875543
No 386
>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]
Probab=40.84 E-value=3e+02 Score=25.46 Aligned_cols=142 Identities=13% Similarity=0.192 Sum_probs=74.7
Q ss_pred ceEEEEEcCCCC----EEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccC
Q psy11412 34 MVTDILISLDDR----YLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFT 109 (290)
Q Consensus 34 ~p~~va~SpDGr----~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g 109 (290)
.++++++-.+-+ +++|+.. .|.|+.|.+.+.+..++....-- .....
T Consensus 154 ~~YGl~lyrs~ktgd~yvfV~~~-qG~~~Qy~l~d~gnGkv~~k~vR----------------------------~fk~~ 204 (364)
T COG4247 154 SAYGLALYRSPKTGDYYVFVNRR-QGDIAQYKLIDQGNGKVGTKLVR----------------------------QFKIP 204 (364)
T ss_pred cceeeEEEecCCcCcEEEEEecC-CCceeEEEEEecCCceEcceeeE----------------------------eeecC
Confidence 456666654433 5666654 68888888877666554321100 00011
Q ss_pred CCceEEEEccCCCEEEEEcCCCCCcceeecccccCCCceeecceeeeeeecccccccCccccCccccCCCCceeEEEEcc
Q psy11412 110 GSSQMFQLSLDGKRIYVSSSLFSPWDKEIYPDLVKTDAAFGSDEIMEFIQRNEMRSMPLSSLGSWKYPARSMVTDILISL 189 (290)
Q Consensus 110 ~gPr~vafsPdG~~lYv~nel~~~~d~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~i~~Sp 189 (290)
+.-.+++....--.||++.|....|-...-+. .|..-..++.+. ..+. +...-..-.|-+.|
T Consensus 205 tQTEG~VaDdEtG~LYIaeEdvaiWK~~Aep~---~G~~g~~idr~~--------d~~~-------LtdDvEGltiYy~p 266 (364)
T COG4247 205 TQTEGMVADDETGFLYIAEEDVAIWKYEAEPN---RGNTGRLIDRIK--------DLSY-------LTDDVEGLTIYYGP 266 (364)
T ss_pred CcccceeeccccceEEEeeccceeeecccCCC---CCCccchhhhhc--------Cchh-------hcccccccEEEEcC
Confidence 34455777777778999988545443221111 121111122111 0000 00000123477888
Q ss_pred CCC-EEEEEeCCCCcEEEEEecCCCCceEeeEEeeC
Q psy11412 190 DDR-YLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLG 224 (290)
Q Consensus 190 DGr-~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~G 224 (290)
.|+ +|.+|..++|+-.+|.- .+....++...++
T Consensus 267 nGkGYL~aSSQGnNtya~y~R--eG~N~YVgsF~vt 300 (364)
T COG4247 267 NGKGYLLASSQGNNTYAAYTR--EGNNDYVGSFGVT 300 (364)
T ss_pred CCcEEEEEecCCCceEEEEEe--eCCCceEEEEeec
Confidence 887 57788888888888753 3455667776654
No 387
>PRK13613 lipoprotein LpqB; Provisional
Probab=39.86 E-value=1.7e+02 Score=30.01 Aligned_cols=19 Identities=21% Similarity=0.067 Sum_probs=14.2
Q ss_pred CceEEEEccCCCEEEEEcC
Q psy11412 111 SSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~ne 129 (290)
.+.++++|++|+.+.+.+.
T Consensus 364 ~~~s~avS~~g~~~A~v~~ 382 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISA 382 (599)
T ss_pred CccceEEcCCCceEEEEcC
Confidence 5667888888887777654
No 388
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=39.31 E-value=34 Score=32.99 Aligned_cols=25 Identities=24% Similarity=0.388 Sum_probs=14.8
Q ss_pred EEEEccCCCE-EEEEeCCCCcEEEEEe
Q psy11412 184 DILISLDDRY-LYTSNWMHGDIRQYDI 209 (290)
Q Consensus 184 ~i~~SpDGr~-Lyvs~r~~~~V~v~Dv 209 (290)
+..||||||. ||.||+ +|...||-+
T Consensus 355 hp~FSPDgk~VlF~Sd~-~G~~~vY~v 380 (386)
T PF14583_consen 355 HPSFSPDGKWVLFRSDM-EGPPAVYLV 380 (386)
T ss_dssp --EE-TTSSEEEEEE-T-TSS-EEEEE
T ss_pred CCccCCCCCEEEEECCC-CCCccEEEE
Confidence 4789999998 567884 666666644
No 389
>KOG1275|consensus
Probab=39.18 E-value=73 Score=34.10 Aligned_cols=29 Identities=17% Similarity=0.195 Sum_probs=25.0
Q ss_pred CCceeEEEEccCCCEEEEEeCCCCcEEEEE
Q psy11412 179 RSMVTDILISLDDRYLYTSNWMHGDIRQYD 208 (290)
Q Consensus 179 ~~~~~~i~~SpDGr~Lyvs~r~~~~V~v~D 208 (290)
++....+.||+.|..|.+.+ .+|.|.+|.
T Consensus 312 ~s~i~~fDiSsn~~alafgd-~~g~v~~wa 340 (1118)
T KOG1275|consen 312 GSGISAFDISSNGDALAFGD-HEGHVNLWA 340 (1118)
T ss_pred CCcceeEEecCCCceEEEec-ccCcEeeec
Confidence 34567899999999999999 688899996
No 390
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=39.01 E-value=67 Score=34.01 Aligned_cols=21 Identities=19% Similarity=0.238 Sum_probs=18.1
Q ss_pred CCCceEEEEccCCCEEEEEcC
Q psy11412 109 TGSSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 109 g~gPr~vafsPdG~~lYv~ne 129 (290)
|....||..+.||||+..++.
T Consensus 618 G~pI~~iDvt~DGkwilaTc~ 638 (794)
T PF08553_consen 618 GDPIIGIDVTADGKWILATCK 638 (794)
T ss_pred CCCeeEEEecCCCcEEEEeec
Confidence 356789999999999998876
No 391
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=38.91 E-value=1e+02 Score=20.23 Aligned_cols=28 Identities=11% Similarity=0.129 Sum_probs=24.3
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEe
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDI 209 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv 209 (290)
...-+.++|....|++++ .+|+|.++.+
T Consensus 13 ~v~~~~w~P~mdLiA~~t-~~g~v~v~Rl 40 (47)
T PF12894_consen 13 RVSCMSWCPTMDLIALGT-EDGEVLVYRL 40 (47)
T ss_pred cEEEEEECCCCCEEEEEE-CCCeEEEEEC
Confidence 355689999999999988 6899999988
No 392
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=38.30 E-value=1.1e+02 Score=24.94 Aligned_cols=31 Identities=29% Similarity=0.428 Sum_probs=21.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCCeEEEEEcCCC
Q psy11412 35 VTDILISLDDRYLYTSNWMHGDIRQYDIRDT 65 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~V~v~dv~d~ 65 (290)
+.---+++|-..||.++-|+++|+.|.+.+.
T Consensus 13 ~L~P~yD~dt~llyl~gKGD~~ir~yEv~~~ 43 (136)
T PF08954_consen 13 VLMPFYDEDTNLLYLAGKGDGNIRYYEVSDE 43 (136)
T ss_dssp -EEEEE-TTT-EEEEEETT-S-EEEEEE-SS
T ss_pred eeEeeEcCCCCEEEEEeccCcEEEEEEEcCC
Confidence 4445689999999999999999999999763
No 393
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=35.30 E-value=57 Score=20.30 Aligned_cols=21 Identities=14% Similarity=0.442 Sum_probs=17.3
Q ss_pred ceEEEEEcCCCCEEEEEeCCCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHG 55 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g 55 (290)
.+.+|+++++|. +|++....+
T Consensus 14 ~~~~IavD~~GN-iYv~G~T~~ 34 (38)
T PF06739_consen 14 YGNGIAVDSNGN-IYVTGYTNG 34 (38)
T ss_pred eEEEEEECCCCC-EEEEEeecC
Confidence 588999999988 888877544
No 394
>KOG0280|consensus
Probab=35.18 E-value=3.8e+02 Score=25.10 Aligned_cols=28 Identities=18% Similarity=0.199 Sum_probs=20.6
Q ss_pred EEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 36 TDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 36 ~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
..+.+++-|..+||+.. .|.+.+.+..+
T Consensus 125 lslD~~~~~~~i~vs~s-~G~~~~v~~t~ 152 (339)
T KOG0280|consen 125 LSLDISTSGTKIFVSDS-RGSISGVYETE 152 (339)
T ss_pred eEEEeeccCceEEEEcC-CCcEEEEecce
Confidence 35678888888988864 78888776543
No 395
>KOG2079|consensus
Probab=34.02 E-value=1.1e+02 Score=33.33 Aligned_cols=31 Identities=19% Similarity=0.325 Sum_probs=25.8
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
..++.++|+.||++|..+- ++|-|.+||+..
T Consensus 131 ~~Vtsvafn~dg~~l~~G~-~~G~V~v~D~~~ 161 (1206)
T KOG2079|consen 131 GPVTSVAFNQDGSLLLAGL-GDGHVTVWDMHR 161 (1206)
T ss_pred CcceeeEecCCCceecccc-CCCcEEEEEccC
Confidence 3567899999999987665 788999999953
No 396
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=32.92 E-value=79 Score=30.83 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=25.6
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
.-..|+++|+|+++++++ .-|.|.++|+..
T Consensus 309 ~~~~i~~sP~~~laA~tD-slGRV~LiD~~~ 338 (415)
T PF14655_consen 309 EGESICLSPSGRLAAVTD-SLGRVLLIDVAR 338 (415)
T ss_pred eEEEEEECCCCCEEEEEc-CCCcEEEEECCC
Confidence 566899999999998886 479999999865
No 397
>PRK13615 lipoprotein LpqB; Provisional
Probab=32.76 E-value=5.5e+02 Score=26.15 Aligned_cols=31 Identities=10% Similarity=-0.016 Sum_probs=21.5
Q ss_pred CceeEEEEccCCCEEEEEeC--CCCcEEEEEec
Q psy11412 180 SMVTDILISLDDRYLYTSNW--MHGDIRQYDIR 210 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r--~~~~V~v~Dv~ 210 (290)
....++.+|+||-++.+-.+ +.++|.|--|.
T Consensus 417 ~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~ 449 (557)
T PRK13615 417 GRVVSLEVARDGARVLVQLETGAGPQLLVASIV 449 (557)
T ss_pred CeeEEEEeCCCccEEEEEEecCCCCEEEEEEEE
Confidence 45788999999999876332 33567765553
No 398
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=32.66 E-value=1.6e+02 Score=20.18 Aligned_cols=18 Identities=11% Similarity=0.145 Sum_probs=14.5
Q ss_pred eEEEEEcCCCCEEEEEeC
Q psy11412 35 VTDILISLDDRYLYTSNW 52 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~ 52 (290)
.+++++-||||.|.+...
T Consensus 3 ~~~~~~q~DGkIlv~G~~ 20 (55)
T TIGR02608 3 AYAVAVQSDGKILVAGYV 20 (55)
T ss_pred eEEEEECCCCcEEEEEEe
Confidence 578899999999977643
No 399
>KOG3621|consensus
Probab=32.32 E-value=2.4e+02 Score=29.36 Aligned_cols=30 Identities=20% Similarity=0.295 Sum_probs=25.7
Q ss_pred CceeEEEEccCCCEEEEEeCCCCcEEEEEec
Q psy11412 180 SMVTDILISLDDRYLYTSNWMHGDIRQYDIR 210 (290)
Q Consensus 180 ~~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~ 210 (290)
..+..++.|+||+.||..+ ..|.|+...++
T Consensus 125 ~rVTal~Ws~~~~k~ysGD-~~Gkv~~~~L~ 154 (726)
T KOG3621|consen 125 CRVTALEWSKNGMKLYSGD-SQGKVVLTELD 154 (726)
T ss_pred ceEEEEEecccccEEeecC-CCceEEEEEec
Confidence 4678899999999999998 67888887774
No 400
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=31.70 E-value=48 Score=31.20 Aligned_cols=25 Identities=20% Similarity=0.294 Sum_probs=0.0
Q ss_pred eEEEEccCCCEEEEEeCCCCcEEEEEe
Q psy11412 183 TDILISLDDRYLYTSNWMHGDIRQYDI 209 (290)
Q Consensus 183 ~~i~~SpDGr~Lyvs~r~~~~V~v~Dv 209 (290)
+++.||+.|| |...|.-.+|.+||+
T Consensus 284 SD~kFs~ngr--yIlsRdyltvkiwDv 308 (460)
T COG5170 284 SDFKFSDNGR--YILSRDYLTVKIWDV 308 (460)
T ss_pred cceEEcCCCc--EEEEeccceEEEEec
No 401
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=30.51 E-value=20 Score=20.20 Aligned_cols=8 Identities=38% Similarity=0.380 Sum_probs=6.4
Q ss_pred EEccCCCE
Q psy11412 186 LISLDDRY 193 (290)
Q Consensus 186 ~~SpDGr~ 193 (290)
.||||||.
T Consensus 7 ~FSp~Grl 14 (23)
T PF10584_consen 7 TFSPDGRL 14 (23)
T ss_dssp SBBTTSSB
T ss_pred eECCCCeE
Confidence 38999985
No 402
>PRK13614 lipoprotein LpqB; Provisional
Probab=29.93 E-value=3.1e+02 Score=27.96 Aligned_cols=19 Identities=5% Similarity=-0.150 Sum_probs=11.9
Q ss_pred CceEEEEccCCCEEEEEcC
Q psy11412 111 SSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 111 gPr~vafsPdG~~lYv~ne 129 (290)
.+.++++|+||+.+.+.++
T Consensus 344 ~~~s~avS~~g~~~A~~~~ 362 (573)
T PRK13614 344 GPASPAESPVSQTVAFLNG 362 (573)
T ss_pred cccceeecCCCceEEEecC
Confidence 4556677777777666543
No 403
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=29.71 E-value=3e+02 Score=28.27 Aligned_cols=72 Identities=13% Similarity=0.054 Sum_probs=49.2
Q ss_pred EEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCceecCCCceEEecCCCCCCCCCcceeecccccCCcceEE
Q psy11412 184 DILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQ 263 (290)
Q Consensus 184 ~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~P~~~a 263 (290)
=|+|.|-+..+.|+.-.-|.|.||.+.. ....-|++|..... ..|-++.
T Consensus 343 liAfn~kaq~VAVASNTcn~ilVYSv~~-s~mPniQqIqLe~~------------------------------ERPKGiC 391 (671)
T PF15390_consen 343 LIAFNPKAQVVAVASNTCNIILVYSVTP-SSMPNIQQIQLESN------------------------------ERPKGIC 391 (671)
T ss_pred eeeeCCcCCEEEEEecCCcEEEEEEecc-ccCCCeeEEEcccC------------------------------CCCceee
Confidence 3899999999998766889999999964 33344566654321 1578888
Q ss_pred EccCCCEEEEEcCCCCCCCcccCC
Q psy11412 264 LSLDGKRIYVSSSLFSPWDKEIYP 287 (290)
Q Consensus 264 ~sPDG~~L~Van~~~~~~~~~~~~ 287 (290)
|--|.-.|.-... -+.-|.-|.|
T Consensus 392 FltdklLLilVGk-qK~td~aFLP 414 (671)
T PF15390_consen 392 FLTDKLLLILVGK-QKSTDPAFLP 414 (671)
T ss_pred EccCCeEEEEecc-ccCCCcccCC
Confidence 8877776665543 2355566655
No 404
>PF12913 SH3_6: SH3 domain of the SH3b1 type; PDB: 3M1U_B.
Probab=29.51 E-value=43 Score=22.96 Aligned_cols=22 Identities=27% Similarity=0.662 Sum_probs=16.3
Q ss_pred ceEEEccCCCEEEEEcCCCCCC
Q psy11412 260 QMFQLSLDGKRIYVSSSLFSPW 281 (290)
Q Consensus 260 ~~~a~sPDG~~L~Van~~~~~~ 281 (290)
.-...|.||+++||-+..+.-|
T Consensus 30 ~i~H~S~D~~W~fV~t~~~~GW 51 (54)
T PF12913_consen 30 YILHTSRDGAWAFVQTPFYSGW 51 (54)
T ss_dssp EEEEE-TTSSEEEEE-SS-EEE
T ss_pred EEEEECCCCCEEEEecCCeeEe
Confidence 5578899999999998877766
No 405
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=29.18 E-value=2.7e+02 Score=30.07 Aligned_cols=20 Identities=10% Similarity=0.321 Sum_probs=12.8
Q ss_pred CCCEEEEEeCCCCeEEEEEcC
Q psy11412 43 DDRYLYTSNWMHGDIRQYDIR 63 (290)
Q Consensus 43 DGr~Lyva~~~~g~V~v~dv~ 63 (290)
.+|.+|+... .+.|.+.|.+
T Consensus 318 ~tkiAfv~~~-~~~L~~~D~d 337 (912)
T TIGR02171 318 KAKLAFRNDV-TGNLAYIDYT 337 (912)
T ss_pred eeeEEEEEcC-CCeEEEEecC
Confidence 4667777763 3477777764
No 406
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=28.79 E-value=6.9e+02 Score=26.06 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=22.4
Q ss_pred ceeEEEEccCCCEEEEEeCC--CCcEEEEEecCCC
Q psy11412 181 MVTDILISLDDRYLYTSNWM--HGDIRQYDIRDTA 213 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~--~~~V~v~Dv~d~~ 213 (290)
.--.|.-|...++++.+.-. .+.|.+.+.++++
T Consensus 225 f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~ 259 (682)
T COG1770 225 FFLSVGRSRSEAYIVISLGSHITSEVRLLDADDPE 259 (682)
T ss_pred EEEEeeeccCCceEEEEcCCCcceeEEEEecCCCC
Confidence 34456778888888876633 3668888877654
No 407
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=28.05 E-value=2.2e+02 Score=25.19 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=21.3
Q ss_pred C-CEEEEEeCCCCcEEEEEecCCCCceEeeEEeeCc
Q psy11412 191 D-RYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGG 225 (290)
Q Consensus 191 G-r~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i~~Gg 225 (290)
| ..|+++. ....|.+|++.. ..-..+-+.++-+
T Consensus 27 g~d~Lfva~-~g~~Vev~~l~~-~~~~~~~~F~Tv~ 60 (215)
T PF14761_consen 27 GPDALFVAA-SGCKVEVYDLEQ-EECPLLCTFSTVG 60 (215)
T ss_pred CCceEEEEc-CCCEEEEEEccc-CCCceeEEEcchh
Confidence 5 5777764 567899999962 2334555565544
No 408
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=27.86 E-value=3.4e+02 Score=25.21 Aligned_cols=27 Identities=30% Similarity=0.351 Sum_probs=14.6
Q ss_pred ceEEEEEcCCCCEEEEEeCCCCeEEEEE
Q psy11412 34 MVTDILISLDDRYLYTSNWMHGDIRQYD 61 (290)
Q Consensus 34 ~p~~va~SpDGr~Lyva~~~~g~V~v~d 61 (290)
....+..++||++++|+.. ++-+..|+
T Consensus 146 s~~~~~r~~dG~~vavs~~-G~~~~s~~ 172 (302)
T PF14870_consen 146 SINDITRSSDGRYVAVSSR-GNFYSSWD 172 (302)
T ss_dssp -EEEEEE-TTS-EEEEETT-SSEEEEE-
T ss_pred eeEeEEECCCCcEEEEECc-ccEEEEec
Confidence 4566777888888888764 23334443
No 409
>PRK13684 Ycf48-like protein; Provisional
Probab=27.39 E-value=3.1e+02 Score=25.59 Aligned_cols=20 Identities=25% Similarity=0.302 Sum_probs=15.0
Q ss_pred ceeEEEEccCCCEEEEEeCC
Q psy11412 181 MVTDILISLDDRYLYTSNWM 200 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~ 200 (290)
...++.++|||+++++..++
T Consensus 174 ~~~~i~~~~~g~~v~~g~~G 193 (334)
T PRK13684 174 VVRNLRRSPDGKYVAVSSRG 193 (334)
T ss_pred eEEEEEECCCCeEEEEeCCc
Confidence 45678899999887777643
No 410
>KOG2445|consensus
Probab=27.07 E-value=2.6e+02 Score=26.35 Aligned_cols=43 Identities=12% Similarity=0.155 Sum_probs=31.1
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEec-CCCCceEeeEEeeC
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIR-DTAHPVLVGQIFLG 224 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~-d~~~~~~v~~i~~G 224 (290)
....+.|.+-||++++.. .+.+|.|||.. +.++......+.+.
T Consensus 15 lihdVs~D~~GRRmAtCS-sDq~vkI~d~~~~s~~W~~Ts~Wrah 58 (361)
T KOG2445|consen 15 LIHDVSFDFYGRRMATCS-SDQTVKIWDSTSDSGTWSCTSSWRAH 58 (361)
T ss_pred eeeeeeecccCceeeecc-CCCcEEEEeccCCCCceEEeeeEEec
Confidence 356789999999987655 78999999963 34455555666554
No 411
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=26.93 E-value=2.7e+02 Score=24.65 Aligned_cols=53 Identities=13% Similarity=0.127 Sum_probs=34.9
Q ss_pred C-CEEEEEeCCCCeEEEEEcCCCCCceeeeEEeecccccCCCceEEecCCCCcCCCCcceeeccccCCCceEEEEccCCC
Q psy11412 44 D-RYLYTSNWMHGDIRQYDIRDTAHPVLVGQIFLGGKIQSDSGVTVIDDPELDKQPDPVIIKGRRFTGSSQMFQLSLDGK 122 (290)
Q Consensus 44 G-r~Lyva~~~~g~V~v~dv~d~~~~~~~~~i~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~g~gPr~vafsPdG~ 122 (290)
| ..|+++. .+..|.+|++.... -+..-+..+= +....|+++..|+
T Consensus 27 g~d~Lfva~-~g~~Vev~~l~~~~-~~~~~~F~Tv--------------------------------~~V~~l~y~~~GD 72 (215)
T PF14761_consen 27 GPDALFVAA-SGCKVEVYDLEQEE-CPLLCTFSTV--------------------------------GRVLQLVYSEAGD 72 (215)
T ss_pred CCceEEEEc-CCCEEEEEEcccCC-CceeEEEcch--------------------------------hheeEEEeccccc
Confidence 5 6787774 57899999997322 2222222110 3567899999999
Q ss_pred EEEEEcCC
Q psy11412 123 RIYVSSSL 130 (290)
Q Consensus 123 ~lYv~nel 130 (290)
+|....+.
T Consensus 73 YlvTlE~k 80 (215)
T PF14761_consen 73 YLVTLEEK 80 (215)
T ss_pred eEEEEEee
Confidence 98887663
No 412
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=26.64 E-value=4.4e+02 Score=23.08 Aligned_cols=24 Identities=21% Similarity=0.270 Sum_probs=17.5
Q ss_pred cCCCCEEEEEeCCCCeEEEEEcCCCC
Q psy11412 41 SLDDRYLYTSNWMHGDIRQYDIRDTA 66 (290)
Q Consensus 41 SpDGr~Lyva~~~~g~V~v~dv~d~~ 66 (290)
...|++||++.. +| |.++++.+..
T Consensus 4 ~~~~~~L~vGt~-~G-l~~~~~~~~~ 27 (275)
T PF00780_consen 4 DSWGDRLLVGTE-DG-LYVYDLSDPS 27 (275)
T ss_pred ccCCCEEEEEEC-CC-EEEEEecCCc
Confidence 357899999964 55 9999984433
No 413
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=26.18 E-value=5e+02 Score=23.65 Aligned_cols=29 Identities=17% Similarity=0.233 Sum_probs=23.3
Q ss_pred eEEEEEcCCCCEEEEEeCCCCeEEEEEcCC
Q psy11412 35 VTDILISLDDRYLYTSNWMHGDIRQYDIRD 64 (290)
Q Consensus 35 p~~va~SpDGr~Lyva~~~~g~V~v~dv~d 64 (290)
-.+++++++| .||.++...+.|.+|+...
T Consensus 188 s~g~~~D~~G-~ly~~~~~~~aI~~w~~~~ 216 (287)
T PF03022_consen 188 SDGMAIDPNG-NLYFTDVEQNAIGCWDPDG 216 (287)
T ss_dssp ECEEEEETTT-EEEEEECCCTEEEEEETTT
T ss_pred CceEEECCCC-cEEEecCCCCeEEEEeCCC
Confidence 4578899855 5777888899999999754
No 414
>KOG1524|consensus
Probab=25.31 E-value=5.1e+02 Score=26.43 Aligned_cols=28 Identities=11% Similarity=0.011 Sum_probs=19.8
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEe
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDI 209 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv 209 (290)
....+..|+||..+.++. +.+.|.+--+
T Consensus 258 SifnlsWS~DGTQ~a~gt-~~G~v~~A~~ 285 (737)
T KOG1524|consen 258 SIFNLSWSADGTQATCGT-STGQLIVAYA 285 (737)
T ss_pred ceEEEEEcCCCceeeccc-cCceEEEeee
Confidence 456688999999988877 5666654433
No 415
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=24.16 E-value=1.2e+02 Score=29.56 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=25.7
Q ss_pred ceeEEEEccCCCEEEEEeCCCCcEEEEEecC
Q psy11412 181 MVTDILISLDDRYLYTSNWMHGDIRQYDIRD 211 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d 211 (290)
....|.++|+|+++.+++ .=+.|.++|+..
T Consensus 309 ~~~~i~~sP~~~laA~tD-slGRV~LiD~~~ 338 (415)
T PF14655_consen 309 EGESICLSPSGRLAAVTD-SLGRVLLIDVAR 338 (415)
T ss_pred eEEEEEECCCCCEEEEEc-CCCcEEEEECCC
Confidence 467799999999988887 568999999964
No 416
>KOG4640|consensus
Probab=22.55 E-value=1.5e+02 Score=30.42 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=25.3
Q ss_pred eEEEEccCCCEEEEEeCCCCcEEEEEecCC
Q psy11412 183 TDILISLDDRYLYTSNWMHGDIRQYDIRDT 212 (290)
Q Consensus 183 ~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~ 212 (290)
+.++.-|||+.|.++= .+|+|++.|+..+
T Consensus 66 ~sL~W~~DGkllaVg~-kdG~I~L~Dve~~ 94 (665)
T KOG4640|consen 66 ASLCWRPDGKLLAVGF-KDGTIRLHDVEKG 94 (665)
T ss_pred eeeeecCCCCEEEEEe-cCCeEEEEEccCC
Confidence 5799999999999987 6799999999643
No 417
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=21.23 E-value=2.8e+02 Score=24.97 Aligned_cols=29 Identities=21% Similarity=0.118 Sum_probs=19.5
Q ss_pred ceeEEEEccCCCEEEEEeCCC--CcEEEEEe
Q psy11412 181 MVTDILISLDDRYLYTSNWMH--GDIRQYDI 209 (290)
Q Consensus 181 ~~~~i~~SpDGr~Lyvs~r~~--~~V~v~Dv 209 (290)
.+++=++-|||+.|.+....+ ..|++|+-
T Consensus 68 FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p 98 (243)
T PF07250_consen 68 FCSGGAFLPDGRLLQTGGDNDGNKAIRIFTP 98 (243)
T ss_pred cccCcCCCCCCCEEEeCCCCccccceEEEec
Confidence 444556779999998876543 45666654
No 418
>KOG1354|consensus
Probab=20.71 E-value=1.6e+02 Score=28.25 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=0.0
Q ss_pred eeEEEEccCCCEEEEEeCCCCcEEEEEecCCCCceEeeEE
Q psy11412 182 VTDILISLDDRYLYTSNWMHGDIRQYDIRDTAHPVLVGQI 221 (290)
Q Consensus 182 ~~~i~~SpDGr~Lyvs~r~~~~V~v~Dv~d~~~~~~v~~i 221 (290)
.+++.||..|| |.-.|.-.+|.+||+.-.+.+...-++
T Consensus 275 ISDvKFs~sGr--yilsRDyltvk~wD~nme~~pv~t~~v 312 (433)
T KOG1354|consen 275 ISDVKFSHSGR--YILSRDYLTVKLWDLNMEAKPVETYPV 312 (433)
T ss_pred hhceEEccCCc--EEEEeccceeEEEeccccCCcceEEee
No 419
>KOG2395|consensus
Probab=20.07 E-value=1.4e+02 Score=30.11 Aligned_cols=21 Identities=19% Similarity=0.324 Sum_probs=18.3
Q ss_pred CCCceEEEEccCCCEEEEEcC
Q psy11412 109 TGSSQMFQLSLDGKRIYVSSS 129 (290)
Q Consensus 109 g~gPr~vafsPdG~~lYv~ne 129 (290)
|...-||..+-||+|+..++.
T Consensus 471 G~~I~hVdvtadGKwil~Tc~ 491 (644)
T KOG2395|consen 471 GDAIKHVDVTADGKWILATCK 491 (644)
T ss_pred CCceeeEEeeccCcEEEEecc
Confidence 467789999999999998877
Done!