BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11415
(70 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain OS=Rattus norvegicus GN=Tuba3a PE=2 SV=1
Length = 450
Score = 154 bits (388), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/70 (94%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P05214|TBA3_MOUSE Tubulin alpha-3 chain OS=Mus musculus GN=Tuba3a PE=1 SV=1
Length = 450
Score = 154 bits (388), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/70 (94%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q32KN8|TBA3_BOVIN Tubulin alpha-3 chain OS=Bos taurus GN=TUBA3 PE=2 SV=1
Length = 450
Score = 154 bits (388), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/70 (94%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q13748|TBA3C_HUMAN Tubulin alpha-3C/D chain OS=Homo sapiens GN=TUBA3C PE=1 SV=3
Length = 450
Score = 154 bits (388), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/70 (94%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P02552|TBA1_CHICK Tubulin alpha-1 chain (Fragment) OS=Gallus gallus PE=1 SV=1
Length = 412
Score = 154 bits (388), Expect = 2e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 263 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 322
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 323 VVPGGDLAKV 332
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific OS=Oncorhynchus mykiss PE=2
SV=1
Length = 450
Score = 154 bits (388), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/70 (94%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q6PEY2|TBA3E_HUMAN Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2
Length = 450
Score = 154 bits (388), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/70 (94%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain OS=Drosophila melanogaster GN=alphaTub84B
PE=2 SV=1
Length = 450
Score = 154 bits (388), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/70 (94%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q6AYZ1|TBA1C_RAT Tubulin alpha-1C chain OS=Rattus norvegicus GN=Tuba1c PE=1 SV=1
Length = 449
Score = 153 bits (387), Expect = 3e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLARV 371
>sp|P52273|TBA_BOMMO Tubulin alpha chain OS=Bombyx mori PE=2 SV=1
Length = 450
Score = 153 bits (387), Expect = 3e-37, Method: Composition-based stats.
Identities = 66/70 (94%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q06331|TBA_ENTDO Tubulin alpha chain OS=Enteroctopus dofleini PE=2 SV=1
Length = 451
Score = 153 bits (387), Expect = 3e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P68373|TBA1C_MOUSE Tubulin alpha-1C chain OS=Mus musculus GN=Tuba1c PE=1 SV=1
Length = 449
Score = 153 bits (386), Expect = 3e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q9BQE3|TBA1C_HUMAN Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1
Length = 449
Score = 153 bits (386), Expect = 3e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P68365|TBA1C_CRIGR Tubulin alpha-1C chain OS=Cricetulus griseus GN=TUBA1C PE=2 SV=1
Length = 449
Score = 153 bits (386), Expect = 3e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q3ZCJ7|TBA1C_BOVIN Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=1 SV=1
Length = 449
Score = 153 bits (386), Expect = 3e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain OS=Aplysia californica PE=2 SV=1
Length = 451
Score = 153 bits (386), Expect = 4e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
+VKCDPRHGKYMACCMLYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 LVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P09645|TBA8_CHICK Tubulin alpha-8 chain (Fragment) OS=Gallus gallus PE=3 SV=1
Length = 324
Score = 152 bits (385), Expect = 4e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 67/70 (95%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN+AIA IKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 177 MVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPPT 236
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 237 VVPGGDLAKV 246
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain OS=Patella vulgata GN=TUB2 PE=2 SV=1
Length = 452
Score = 152 bits (385), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYM+CCMLYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q2HJ86|TBA1D_BOVIN Tubulin alpha-1D chain OS=Bos taurus GN=TUBA1D PE=1 SV=1
Length = 452
Score = 152 bits (385), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q9NY65|TBA8_HUMAN Tubulin alpha-8 chain OS=Homo sapiens GN=TUBA8 PE=1 SV=1
Length = 449
Score = 152 bits (385), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 66/70 (94%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q9JJZ2|TBA8_MOUSE Tubulin alpha-8 chain OS=Mus musculus GN=Tuba8 PE=1 SV=1
Length = 449
Score = 152 bits (384), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 66/70 (94%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q2HJB8|TBA8_BOVIN Tubulin alpha-8 chain OS=Bos taurus GN=TUBA8 PE=2 SV=1
Length = 449
Score = 152 bits (384), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 66/70 (94%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain OS=Paracentrotus lividus PE=2 SV=1
Length = 452
Score = 152 bits (384), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P68370|TBA1A_RAT Tubulin alpha-1A chain OS=Rattus norvegicus GN=Tuba1a PE=1 SV=1
Length = 451
Score = 152 bits (384), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|A5A6J1|TBA1A_PANTR Tubulin alpha-1A chain OS=Pan troglodytes GN=TUBA1A PE=2 SV=1
Length = 451
Score = 152 bits (384), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P68369|TBA1A_MOUSE Tubulin alpha-1A chain OS=Mus musculus GN=Tuba1a PE=1 SV=1
Length = 451
Score = 152 bits (384), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q71U36|TBA1A_HUMAN Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A PE=1 SV=1
Length = 451
Score = 152 bits (384), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P68362|TBA1A_CRIGR Tubulin alpha-1A chain OS=Cricetulus griseus GN=TUBA1A PE=2 SV=1
Length = 451
Score = 152 bits (384), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q6AY56|TBA8_RAT Tubulin alpha-8 chain OS=Rattus norvegicus GN=Tuba8 PE=2 SV=1
Length = 449
Score = 152 bits (384), Expect = 6e-37, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 66/70 (94%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACCMLYRGDVVPKDVN AIA IKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P08537|TBA_XENLA Tubulin alpha chain OS=Xenopus laevis GN=tuba PE=2 SV=2
Length = 449
Score = 152 bits (383), Expect = 8e-37, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P36220|TBA_TORMA Tubulin alpha chain OS=Torpedo marmorata PE=2 SV=1
Length = 451
Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q6P9V9|TBA1B_RAT Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tuba1b PE=1 SV=1
Length = 451
Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q2XVP4|TBA1B_PIG Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1
Length = 451
Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P05213|TBA1B_MOUSE Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b PE=1 SV=2
Length = 451
Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P68360|TBA1B_MERUN Tubulin alpha-1B chain OS=Meriones unguiculatus GN=TUBA1B PE=2 SV=1
Length = 451
Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q4R538|TBA1B_MACFA Tubulin alpha-1B chain OS=Macaca fascicularis GN=TUBA1B PE=2 SV=1
Length = 451
Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P68363|TBA1B_HUMAN Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B PE=1 SV=1
Length = 451
Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P68361|TBA1B_CRIGR Tubulin alpha-1B chain OS=Cricetulus griseus GN=TUBA1B PE=2 SV=1
Length = 451
Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P81947|TBA1B_BOVIN Tubulin alpha-1B chain OS=Bos taurus PE=1 SV=2
Length = 451
Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q5R1W4|TBA1B_PANTR Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1B PE=2 SV=1
Length = 451
Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P02550|TBA1A_PIG Tubulin alpha-1A chain OS=Sus scrofa GN=TUBA1A PE=1 SV=1
Length = 451
Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 68/70 (97%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINY+PPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYEPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P30436|TBA_ONCKE Tubulin alpha chain OS=Oncorhynchus keta PE=2 SV=2
Length = 450
Score = 150 bits (379), Expect = 2e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 67/70 (95%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVNSAIA IKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P11481|TBA1_VOLCA Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN=TUBA1 PE=3 SV=1
Length = 451
Score = 150 bits (379), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/70 (88%), Positives = 67/70 (95%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC++YRGDVVPKDVN+A+ATIKTKRTIQFVDWCPTGFK GINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P06605|TBA3_DROME Tubulin alpha-3 chain OS=Drosophila melanogaster GN=alphaTub84D
PE=2 SV=1
Length = 450
Score = 150 bits (378), Expect = 3e-36, Method: Composition-based stats.
Identities = 65/70 (92%), Positives = 67/70 (95%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVK DPRHGKYMACCMLYRGDVVPKDVN+AIATIKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q8WQ47|TBA_LEPDS Tubulin alpha chain OS=Lepidoglyphus destructor PE=1 SV=2
Length = 450
Score = 150 bits (378), Expect = 3e-36, Method: Composition-based stats.
Identities = 63/70 (90%), Positives = 67/70 (95%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIA IKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|P06604|TBA2_DROME Tubulin alpha-2 chain OS=Drosophila melanogaster GN=alphaTub85E
PE=1 SV=1
Length = 449
Score = 149 bits (377), Expect = 4e-36, Method: Composition-based stats.
Identities = 64/70 (91%), Positives = 67/70 (95%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPR GKYMACCMLYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRRGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q94572|TBA3_HOMAM Tubulin alpha-3 chain OS=Homarus americanus PE=2 SV=1
Length = 451
Score = 149 bits (377), Expect = 4e-36, Method: Composition-based stats.
Identities = 63/70 (90%), Positives = 67/70 (95%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIATIKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VPGGDL +
Sbjct: 362 AVPGGDLAKV 371
>sp|Q25008|TBA1_HOMAM Tubulin alpha-1 chain OS=Homarus americanus PE=2 SV=1
Length = 451
Score = 149 bits (376), Expect = 5e-36, Method: Composition-based stats.
Identities = 63/70 (90%), Positives = 66/70 (94%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIA IKTKRTIQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIANIKTKRTIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPG DL +
Sbjct: 362 VVPGADLAKV 371
>sp|P09204|TBA1_CHLRE Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii GN=TUBA1 PE=1
SV=1
Length = 451
Score = 149 bits (376), Expect = 5e-36, Method: Composition-based stats.
Identities = 61/70 (87%), Positives = 67/70 (95%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC++YRGDVVPKDVN+++ATIKTKRTIQFVDWCPTGFK GINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
>sp|Q5XIF6|TBA4A_RAT Tubulin alpha-4A chain OS=Rattus norvegicus GN=Tuba4a PE=2 SV=1
Length = 448
Score = 149 bits (376), Expect = 5e-36, Method: Composition-based stats.
Identities = 63/70 (90%), Positives = 67/70 (95%)
Query: 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 60
MVKCDPRHGKYMACC+LYRGDVVPKDVN+AIA IKTKR+IQFVDWCPTGFKVGINYQPPT
Sbjct: 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPT 361
Query: 61 VVPGGDLRHI 70
VVPGGDL +
Sbjct: 362 VVPGGDLAKV 371
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.143 0.485
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,953,739
Number of Sequences: 539616
Number of extensions: 931144
Number of successful extensions: 2581
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2159
Number of HSP's gapped (non-prelim): 418
length of query: 70
length of database: 191,569,459
effective HSP length: 42
effective length of query: 28
effective length of database: 168,905,587
effective search space: 4729356436
effective search space used: 4729356436
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)