Query psy11415
Match_columns 70
No_of_seqs 100 out of 727
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 17:51:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11415.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11415hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_A Tubulin alpha chain; al 99.9 1.9E-22 6.7E-27 133.3 4.7 69 1-69 302-370 (451)
2 3ryc_B Tubulin beta chain; alp 99.8 1.3E-20 4.6E-25 124.4 3.6 65 1-65 300-364 (445)
3 3cb2_A Gamma-1-tubulin, tubuli 99.8 6E-19 2.1E-23 117.3 5.2 63 1-63 304-369 (475)
4 2btq_B Tubulin btubb; structur 99.7 2E-17 7E-22 108.8 2.4 64 1-66 300-365 (426)
5 2bto_A Tubulin btuba; bacteria 99.5 9.3E-16 3.2E-20 102.0 1.8 62 1-64 306-368 (473)
6 1w5f_A Cell division protein F 97.5 6.7E-05 2.3E-09 48.5 3.1 55 1-61 261-315 (353)
7 2vap_A FTSZ, cell division pro 97.5 8.8E-05 3E-09 48.2 3.5 54 1-61 274-328 (364)
8 1ofu_A FTSZ, cell division pro 97.4 9.1E-05 3.1E-09 47.3 3.0 52 4-61 253-304 (320)
9 2vaw_A FTSZ, cell division pro 97.4 0.00016 5.4E-09 47.4 4.1 53 3-61 252-304 (394)
10 2vxy_A FTSZ, cell division pro 97.2 0.00031 1.1E-08 45.9 3.4 55 1-61 249-303 (382)
11 1rq2_A Cell division protein F 97.1 0.00022 7.6E-09 46.6 2.4 55 1-61 249-303 (382)
12 2r75_1 Cell division protein F 96.9 0.00079 2.7E-08 43.3 3.2 43 14-62 257-301 (338)
13 2h9z_A Hypothetical protein HP 66.3 3 0.0001 21.5 1.6 30 6-36 49-78 (86)
14 1rwu_A Hypothetical UPF0250 pr 49.4 7.2 0.00025 21.0 1.3 30 6-36 72-101 (109)
15 2lc0_A Putative uncharacterize 42.4 43 0.0015 18.5 4.5 41 15-55 24-67 (132)
16 1x5e_A Thioredoxin domain cont 30.0 46 0.0016 16.8 2.5 29 18-46 92-120 (126)
17 2yyb_A Hypothetical protein TT 26.5 57 0.002 19.6 2.8 27 24-52 3-30 (242)
18 1nmo_A Hypothetical protein YB 25.9 61 0.0021 19.5 2.8 26 25-52 4-29 (247)
19 3pbp_B Nucleoporin NUP116/NSP1 25.4 48 0.0017 18.7 2.2 25 25-49 110-134 (148)
20 1t5q_A Gastric inhibitory poly 24.1 36 0.0012 14.1 1.1 18 26-46 9-26 (30)
21 2l3n_A DNA-binding protein RAP 23.8 36 0.0012 17.5 1.3 19 17-35 4-22 (104)
22 2g49_C Glucagon preproprotein; 23.7 33 0.0011 14.1 0.9 19 26-47 9-27 (29)
23 2kd5_A ADF H, actin severing a 22.9 15 0.00051 20.2 -0.3 14 38-51 79-92 (144)
24 1f7s_A Actin depolymerizing fa 22.9 14 0.00046 20.2 -0.5 14 38-51 83-96 (139)
25 3nf5_A Nucleoporin NUP116; nuc 22.7 49 0.0017 19.1 1.8 24 26-49 122-145 (164)
26 1qbj_A Protein (double-strande 22.0 86 0.0029 15.6 3.2 31 21-51 38-68 (81)
27 3kep_A Nucleoporin NUP145; nuc 21.8 48 0.0017 19.3 1.7 25 25-49 132-156 (174)
28 2i2q_A Cofilin; N-terminal ser 21.7 15 0.0005 19.9 -0.5 14 38-51 79-92 (137)
29 3c5t_B Exendin-4, exenatide; l 21.3 18 0.00062 15.2 -0.1 10 40-49 12-21 (31)
30 2p1g_A Putative xylanase; stru 21.0 30 0.001 21.3 0.8 33 19-51 60-101 (249)
31 3rnv_A HC-Pro, helper componen 20.9 89 0.0031 18.0 2.7 25 6-30 39-64 (158)
32 1hqz_1 ABP1P, actin-binding pr 20.7 16 0.00054 19.9 -0.5 14 38-51 79-92 (141)
33 1cnu_A Actophorin, ADF, cofili 20.7 16 0.00055 19.7 -0.5 14 38-51 77-90 (137)
34 2l72_A Tgadf, actin depolymeri 20.5 16 0.00056 20.2 -0.5 13 39-51 89-101 (139)
35 1j3e_A SEQA protein; protein-D 20.2 22 0.00074 19.5 -0.0 34 9-44 23-57 (115)
No 1
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=99.86 E-value=1.9e-22 Score=133.32 Aligned_cols=69 Identities=93% Similarity=1.644 Sum_probs=65.4
Q ss_pred CccccCCCCchhhhhhhhcccCChHHHHHHHHHhhhhccccccccCCcceeEEEeccCCccccCCCCcC
Q psy11415 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLRH 69 (70)
Q Consensus 1 ~~~~~~~~g~~ls~~~~~rG~~~~~~i~~~i~~~~~~~~~~f~~W~p~~~kv~~~~~~p~~~~~~~l~~ 69 (70)
|++|||+.|+|||++++|||+++++||++++.++|.|+.++|++|+|+|||+++|++||...|.++|+.
T Consensus 302 m~~~dp~~gky~a~~~~~RG~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~ 370 (451)
T 3ryc_A 302 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 370 (451)
T ss_dssp SSCCCGGGSCEEEEEEEEEESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCC
T ss_pred eEecCCCCCchheehhhcccCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccc
Confidence 678999999999999999999999999999999999999999999999999999999999998877653
No 2
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=99.80 E-value=1.3e-20 Score=124.41 Aligned_cols=65 Identities=32% Similarity=0.727 Sum_probs=61.1
Q ss_pred CccccCCCCchhhhhhhhcccCChHHHHHHHHHhhhhccccccccCCcceeEEEeccCCccccCC
Q psy11415 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 65 (70)
Q Consensus 1 ~~~~~~~~g~~ls~~~~~rG~~~~~~i~~~i~~~~~~~~~~f~~W~p~~~kv~~~~~~p~~~~~~ 65 (70)
|++|||+.|+|||++++|||+++++||.+++.+++.|+.++|++|+|++||+++|++||...+.+
T Consensus 300 m~~~dp~~gky~a~~~~~RG~v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~~~~s 364 (445)
T 3ryc_B 300 MAACDPRHGRYLTVATIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS 364 (445)
T ss_dssp SSSCCGGGSCEEEEEEEEEESCCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTTCSEE
T ss_pred eeecCCCCCcceeeeeeeecCCChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCccccee
Confidence 67899999999999999999999999999999999999999999999999999999999866544
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=99.76 E-value=6e-19 Score=117.33 Aligned_cols=63 Identities=22% Similarity=0.521 Sum_probs=58.1
Q ss_pred CccccCC---CCchhhhhhhhcccCChHHHHHHHHHhhhhccccccccCCcceeEEEeccCCcccc
Q psy11415 1 MVKCDPR---HGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 63 (70)
Q Consensus 1 ~~~~~~~---~g~~ls~~~~~rG~~~~~~i~~~i~~~~~~~~~~f~~W~p~~~kv~~~~~~p~~~~ 63 (70)
|++|||+ .|+|||++++|||+++++||.+++.++++|+.++|++|+|+++|+++|++||...+
T Consensus 304 m~~~dp~~~~~gkyla~~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~ 369 (475)
T 3cb2_A 304 MVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPS 369 (475)
T ss_dssp SSCCCCC--CCCCEEEEEEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC---
T ss_pred eEecCcccccccchhhhHHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCC
Confidence 6789999 99999999999999999999999999999999999999999999999999998654
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=99.66 E-value=2e-17 Score=108.81 Aligned_cols=64 Identities=31% Similarity=0.616 Sum_probs=55.4
Q ss_pred CccccCCCCchhhhhhhhcccCChHHHHHHHHHhhhhccccccccCC--cceeEEEeccCCccccCCC
Q psy11415 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCP--TGFKVGINYQPPTVVPGGD 66 (70)
Q Consensus 1 ~~~~~~~~g~~ls~~~~~rG~~~~~~i~~~i~~~~~~~~~~f~~W~p--~~~kv~~~~~~p~~~~~~~ 66 (70)
|++|||+.|+|||+++++||+++++||++++.++ |+.++|++|+| +++|+++|++||...+.+.
T Consensus 300 m~~~dp~~g~yla~~~i~rG~v~~~~v~~~~~~i--k~~~~fv~W~p~~~~~k~~i~~~~p~~~~~s~ 365 (426)
T 2btq_B 300 TAAIDWQQGVYLAASALFRGDVKAKDVDENMATI--RKSLNYASYMPASGGLKLGYAETAPEGFASSG 365 (426)
T ss_dssp SSCCCTTTCCEEEEEEEEECC----CTTTTHHHH--HTTSCBCTTSCSSCSEEEEEESCCCTTCSSBC
T ss_pred eEecCCCCchHHHHHHHHcCCCCHHHHHHHHHHH--hcCCCCcccCCCCCceeeeeeccCCCCCccee
Confidence 6789999999999999999999999999999998 77899999999 9999999999998777655
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=99.55 E-value=9.3e-16 Score=102.04 Aligned_cols=62 Identities=31% Similarity=0.693 Sum_probs=53.6
Q ss_pred CccccCCCCchhhhhhhhcccCChHHH-HHHHHHhhhhccccccccCCcceeEEEeccCCccccC
Q psy11415 1 MVKCDPRHGKYMACCMLYRGDVVPKDV-NSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 64 (70)
Q Consensus 1 ~~~~~~~~g~~ls~~~~~rG~~~~~~i-~~~i~~~~~~~~~~f~~W~p~~~kv~~~~~~p~~~~~ 64 (70)
|++|||+.|+||++++++||+++++|| ++++.++++++.++| |+|+++|+++|++||.+.+.
T Consensus 306 m~~~dp~~gkyla~~~i~RG~v~~~dv~~~~i~~ik~k~~~~F--W~p~~~kv~i~~~pp~g~~~ 368 (473)
T 2bto_A 306 FAACSPMEGRFLSTAVLYRGIMEDKPLADAALAAMREKLPLTY--WIPTAFKIGYVEQPGISHRK 368 (473)
T ss_dssp SSSSCGGGSCEEEEEEEEEEC----CCHHHHHHHHHTTSCBCS--SSCCCEEEEEESSCCSSCSE
T ss_pred eeecCCCCchHHHHHHhhcCCCChHHhhHHHHHHHHhhcccce--ecCCcceecccccCCcCcce
Confidence 578999999999999999999999999 999999999999999 99999999999999986443
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=97.50 E-value=6.7e-05 Score=48.54 Aligned_cols=55 Identities=9% Similarity=0.190 Sum_probs=46.0
Q ss_pred CccccCCCCchhhhhhhhcccCChHHHHHHHHHhhhhccccccccCCcceeEEEeccCCcc
Q psy11415 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 61 (70)
Q Consensus 1 ~~~~~~~~g~~ls~~~~~rG~~~~~~i~~~i~~~~~~~~~~f~~W~p~~~kv~~~~~~p~~ 61 (70)
|+.|+++.++|+.++++++|+++.+|+++++..++++... |.+++.|.|..|+..
T Consensus 261 ll~~d~~~ak~~l~~i~~~~dl~~~ev~~a~~~I~~~~~~------~~~i~~G~~~d~~~~ 315 (353)
T 1w5f_A 261 LIEHPVENASSIVFNITAPSNIRMEEVHEAAMIIRQNSSE------DADVKFGLIFDDEVP 315 (353)
T ss_dssp TCCSCGGGCSEEEEEEEECTTCCHHHHHHHHHHHHTTSCT------TSEEEEEEEECTTSC
T ss_pred CcCCChhhcceeEEEEEeCCCCCHHHHHHHHHHHHHhhCC------CCcEEEEEEeCCCCC
Confidence 3458899999999999999999999999999999876332 678999999887653
No 7
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=97.49 E-value=8.8e-05 Score=48.20 Aligned_cols=54 Identities=11% Similarity=0.149 Sum_probs=46.0
Q ss_pred CccccCCCCchhhhhhhhcccCChHHHHHHHHHhhhhccccccccCC-cceeEEEeccCCcc
Q psy11415 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCP-TGFKVGINYQPPTV 61 (70)
Q Consensus 1 ~~~~~~~~g~~ls~~~~~rG~~~~~~i~~~i~~~~~~~~~~f~~W~p-~~~kv~~~~~~p~~ 61 (70)
|+.||++.++|+.++++++|+++.+|+++++..++++.. | .+++.|.|..||..
T Consensus 274 ll~~d~~~ak~~l~~i~~~~dl~~~ev~~a~~~I~~~~~-------~~a~ii~G~~~~~~~~ 328 (364)
T 2vap_A 274 LLDVDIDGATGALIHVMGPEDLTLEEAREVVATVSSRLD-------PNATIIWGATIDENLE 328 (364)
T ss_dssp TCCSCGGGCCEEEEEEEECTTCCHHHHHHHHHHHHHHSC-------TTCEEEEEEEECTTCS
T ss_pred CcCcChhhcceEEEEEEeCCCCCHHHHHHHHHHHHHhcC-------CCCCEEEEEEecCCCC
Confidence 456889999999999999999999999999999987633 4 67899999887754
No 8
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=97.43 E-value=9.1e-05 Score=47.29 Aligned_cols=52 Identities=10% Similarity=0.010 Sum_probs=44.9
Q ss_pred ccCCCCchhhhhhhhcccCChHHHHHHHHHhhhhccccccccCCcceeEEEeccCCcc
Q psy11415 4 CDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 61 (70)
Q Consensus 4 ~~~~~g~~ls~~~~~rG~~~~~~i~~~i~~~~~~~~~~f~~W~p~~~kv~~~~~~p~~ 61 (70)
||++.++|+.++++++|+++.+|+++++..++++... +.+++.|.|..||..
T Consensus 253 ~d~~~ak~~l~~i~~~~d~~~~ev~~a~~~i~~~~~~------~~~ii~G~~~~~~~~ 304 (320)
T 1ofu_A 253 VNLQGARGILVNITAGPDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADMR 304 (320)
T ss_dssp CCGGGCSEEEEEEEECTTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECTTCC
T ss_pred CCccccceEEEEEEeCCCCCHHHHHHHHHHHHHhcCC------CCcEEEEEEcCCCCC
Confidence 8899999999999999999999999999999876432 578999999888753
No 9
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=97.42 E-value=0.00016 Score=47.44 Aligned_cols=53 Identities=9% Similarity=0.013 Sum_probs=44.9
Q ss_pred cccCCCCchhhhhhhhcccCChHHHHHHHHHhhhhccccccccCCcceeEEEeccCCcc
Q psy11415 3 KCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 61 (70)
Q Consensus 3 ~~~~~~g~~ls~~~~~rG~~~~~~i~~~i~~~~~~~~~~f~~W~p~~~kv~~~~~~p~~ 61 (70)
.||++.++|+.++++++|+++.+|+++++..++++... +.+|+.|.|..||..
T Consensus 252 ~~d~~~ak~~lv~i~~~~dl~~~ev~~a~~~I~~~~~~------~a~i~~G~~~d~~~~ 304 (394)
T 2vaw_A 252 DVNLQGARGILVNITAGPDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADMR 304 (394)
T ss_dssp TCCTTTCSEEEEEEEECTTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECSSCC
T ss_pred CCCccccceeEEEEEeCCCCCHHHHHHHHHHHHHhcCC------CCCEEEEeecCCCCC
Confidence 47899999999999999999999999999999876432 577899999887754
No 10
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=97.17 E-value=0.00031 Score=45.92 Aligned_cols=55 Identities=5% Similarity=-0.013 Sum_probs=43.7
Q ss_pred CccccCCCCchhhhhhhhcccCChHHHHHHHHHhhhhccccccccCCcceeEEEeccCCcc
Q psy11415 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 61 (70)
Q Consensus 1 ~~~~~~~~g~~ls~~~~~rG~~~~~~i~~~i~~~~~~~~~~f~~W~p~~~kv~~~~~~p~~ 61 (70)
|+.||++.++|+.+.+..+++++.+|+++++..++++.. .+.+|+.|.|..++..
T Consensus 249 ll~~d~~~ak~~l~~i~gg~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~~ 303 (382)
T 2vxy_A 249 LLEAAIDGAQGVLMNITGGTNLSLYEVQEAADIVASASD------QDVNMIFGSVINENLK 303 (382)
T ss_dssp TSCSCGGGCSEEEEEEEECTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECTTCS
T ss_pred CcCCChhhcceeEEEEEeCCCCCHHHHHHHHHHHHHhcC------CCCCEEEEeecCCCCC
Confidence 456889999999776655568999999999999987643 3677899998887653
No 11
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=97.13 E-value=0.00022 Score=46.59 Aligned_cols=55 Identities=7% Similarity=0.033 Sum_probs=44.1
Q ss_pred CccccCCCCchhhhhhhhcccCChHHHHHHHHHhhhhccccccccCCcceeEEEeccCCcc
Q psy11415 1 MVKCDPRHGKYMACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 61 (70)
Q Consensus 1 ~~~~~~~~g~~ls~~~~~rG~~~~~~i~~~i~~~~~~~~~~f~~W~p~~~kv~~~~~~p~~ 61 (70)
|+.||++.++|+.+.+..+++++.+|+++++..++++.. .+.+|++|+|..||..
T Consensus 249 ll~~d~~~ak~~l~~i~gg~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~~ 303 (382)
T 1rq2_A 249 LLEASMEGAQGVLMSIAGGSDLGLFEINEAASLVQDAAH------PDANIIFGTVIDDSLG 303 (382)
T ss_dssp GGTTCGGGCSEEEEEEEECTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECGGGT
T ss_pred CcCCChhchheEEEEEEeCCCCCHHHHHHHHHHHHHhhC------CCCCEEEEEEeCCCCC
Confidence 456889999999876655568999999999999987633 4788999999887653
No 12
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=96.86 E-value=0.00079 Score=43.26 Aligned_cols=43 Identities=14% Similarity=0.101 Sum_probs=37.0
Q ss_pred hhhhhcc--cCChHHHHHHHHHhhhhccccccccCCcceeEEEeccCCccc
Q psy11415 14 CCMLYRG--DVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 62 (70)
Q Consensus 14 ~~~~~rG--~~~~~~i~~~i~~~~~~~~~~f~~W~p~~~kv~~~~~~p~~~ 62 (70)
+++++|| +++.+|+++++..++++. + .|.+|++|+|..||...
T Consensus 257 ~l~~i~G~~dl~~~ev~~a~~~I~~~~-----~-~~~~i~~G~~~~~~~~~ 301 (338)
T 2r75_1 257 LLVTIWTSEDIPYDIVDEVMERIHSKV-----H-PEAEIIFGAVLEPQEQD 301 (338)
T ss_dssp EEEEEEECTTSCTTHHHHHHHHHHHHS-----C-TTCEEEEEEEECTTCCS
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHhc-----C-CCCcEEEEEEeCCCCCC
Confidence 6678999 899999999999998763 3 78999999999998743
No 13
>2h9z_A Hypothetical protein HP0495; feredoxin-like (beta-alpha-beta-BETA-alpha-beta), structural genomics, unknown function; NMR {Helicobacter pylori} SCOP: d.58.54.2 PDB: 2joq_A
Probab=66.35 E-value=3 Score=21.46 Aligned_cols=30 Identities=10% Similarity=0.148 Sum_probs=21.9
Q ss_pred CCCCchhhhhhhhcccCChHHHHHHHHHhhh
Q psy11415 6 PRHGKYMACCMLYRGDVVPKDVNSAIATIKT 36 (70)
Q Consensus 6 ~~~g~~ls~~~~~rG~~~~~~i~~~i~~~~~ 36 (70)
.++|+|.|..+.++- .+..++++....++.
T Consensus 49 Ss~GkY~Svtv~i~a-~s~eq~~~iY~~L~~ 78 (86)
T 2h9z_A 49 SKNAKFYSFNVSMEV-SNESERNEIFQKISQ 78 (86)
T ss_dssp SCCSSCEEEEEEEEC-CSHHHHHHHHHHHTC
T ss_pred CCCCeEEEEEEEEEE-CCHHHHHHHHHHHhc
Confidence 466999999876665 366777777777754
No 14
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=49.37 E-value=7.2 Score=21.03 Aligned_cols=30 Identities=10% Similarity=0.227 Sum_probs=21.1
Q ss_pred CCCCchhhhhhhhcccCChHHHHHHHHHhhh
Q psy11415 6 PRHGKYMACCMLYRGDVVPKDVNSAIATIKT 36 (70)
Q Consensus 6 ~~~g~~ls~~~~~rG~~~~~~i~~~i~~~~~ 36 (70)
.+.|+|.|+.+.++- .+..++.+....++.
T Consensus 72 Ss~GkY~Svtv~v~v-~S~eQv~aiY~~L~~ 101 (109)
T 1rwu_A 72 SSKGNYHSVSITINA-THIEQVETLYEELGK 101 (109)
T ss_dssp SSCSSEEEEEEEECC-SSHHHHHHHHHHHSC
T ss_pred CCCCeEEEEEEEEEE-CCHHHHHHHHHHHhc
Confidence 567999998876554 366677777777654
No 15
>2lc0_A Putative uncharacterized protein TB39.8; FHAA, kinase substrate, protein binding; NMR {Mycobacterium tuberculosis}
Probab=42.39 E-value=43 Score=18.47 Aligned_cols=41 Identities=12% Similarity=0.357 Sum_probs=28.3
Q ss_pred hhhhcccCChHHHHHHHHHhhhhcccccc---ccCCcceeEEEe
Q psy11415 15 CMLYRGDVVPKDVNSAIATIKTKRTIQFV---DWCPTGFKVGIN 55 (70)
Q Consensus 15 ~~~~rG~~~~~~i~~~i~~~~~~~~~~f~---~W~p~~~kv~~~ 55 (70)
+=.|+|++.+-||.+.+.+-.+.+..... --.||.+.|.+.
T Consensus 24 ar~F~~~v~PvEIa~~L~RE~d~~~~~~~~~r~~aPN~y~V~Ls 67 (132)
T 2lc0_A 24 ARIFGGSIVPQEVEALLRREAADGIQSLQGNRLLAPNEYIITLG 67 (132)
T ss_dssp HHHHTTSSCTHHHHHHHHHHHHHTCBCCCTTCCBCCCEEEEEEE
T ss_pred hhhcCCCCchHHHHHHHHHHHHhCCeEcCCCcEEcCceEEEEeC
Confidence 34678999999999998876554322211 246888888775
No 16
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.95 E-value=46 Score=16.84 Aligned_cols=29 Identities=24% Similarity=0.342 Sum_probs=17.8
Q ss_pred hcccCChHHHHHHHHHhhhhccccccccC
Q psy11415 18 YRGDVVPKDVNSAIATIKTKRTIQFVDWC 46 (70)
Q Consensus 18 ~rG~~~~~~i~~~i~~~~~~~~~~f~~W~ 46 (70)
+.|..+..++.+.+.+...+.......|-
T Consensus 92 ~~G~~~~~~l~~~l~~~~~~~~~~~~~~~ 120 (126)
T 1x5e_A 92 YQGPRTKKDFINFISDKEWKSIEPVSSWF 120 (126)
T ss_dssp CCSCCCHHHHHHHHHTCGGGGSCEECCCC
T ss_pred eecCCCHHHHHHHHHHHhhccCCCchhhh
Confidence 45777788888888776544333333454
No 17
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=26.49 E-value=57 Score=19.57 Aligned_cols=27 Identities=15% Similarity=0.165 Sum_probs=18.1
Q ss_pred hHHHHHHHHHhhhhcccccc-ccCCcceeE
Q psy11415 24 PKDVNSAIATIKTKRTIQFV-DWCPTGFKV 52 (70)
Q Consensus 24 ~~~i~~~i~~~~~~~~~~f~-~W~p~~~kv 52 (70)
.+|+.+.++++-.. ..+- +|.++|+++
T Consensus 3 ~~ei~~~le~~~p~--~~~~~~~d~~GL~v 30 (242)
T 2yyb_A 3 RDELVRYLDAYLRI--QDFPQDPSLNGLQV 30 (242)
T ss_dssp HHHHHHHHHHHTTG--GGCTTCSSCCEEEE
T ss_pred HHHHHHHHHHhCCH--hhhccCCCCCeEEE
Confidence 34666666665433 2356 799999998
No 18
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=25.89 E-value=61 Score=19.48 Aligned_cols=26 Identities=19% Similarity=0.442 Sum_probs=17.4
Q ss_pred HHHHHHHHHhhhhccccccccCCcceeE
Q psy11415 25 KDVNSAIATIKTKRTIQFVDWCPTGFKV 52 (70)
Q Consensus 25 ~~i~~~i~~~~~~~~~~f~~W~p~~~kv 52 (70)
+|+.+.+.++-.. ..|.+|.++|+.+
T Consensus 4 ~ei~~~le~~~p~--~~~~~~d~~GL~v 29 (247)
T 1nmo_A 4 TELEQLINEKLNS--AAISDYAPNGLQV 29 (247)
T ss_dssp HHHHHHHHHHTTC--TTSCCSSCCEEEE
T ss_pred HHHHHHHHHhCCh--hhhCCcCCCeeEE
Confidence 4666666665321 3466999999987
No 19
>3pbp_B Nucleoporin NUP116/NSP116; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 2aiv_A
Probab=25.39 E-value=48 Score=18.72 Aligned_cols=25 Identities=16% Similarity=0.240 Sum_probs=20.9
Q ss_pred HHHHHHHHHhhhhccccccccCCcc
Q psy11415 25 KDVNSAIATIKTKRTIQFVDWCPTG 49 (70)
Q Consensus 25 ~~i~~~i~~~~~~~~~~f~~W~p~~ 49 (70)
..+.+.+.+++++....|+++.|.+
T Consensus 110 ~~~~~~i~rlk~~~g~~FvsYd~~t 134 (148)
T 3pbp_B 110 QLVKRHIERLKKNPNSKFESYDADS 134 (148)
T ss_dssp HHHHHHHHHHTSCSSSEEEEECTTT
T ss_pred HHHHHHHHHHhhcCCCEEEEEeCCC
Confidence 3578889999988999999998864
No 20
>1t5q_A Gastric inhibitory polypeptide; GIP, molecular modelling, helix, diabetes, obesity, hormone/growth factor complex; NMR {Synthetic} SCOP: j.6.1.1
Probab=24.06 E-value=36 Score=14.07 Aligned_cols=18 Identities=33% Similarity=0.672 Sum_probs=9.1
Q ss_pred HHHHHHHHhhhhccccccccC
Q psy11415 26 DVNSAIATIKTKRTIQFVDWC 46 (70)
Q Consensus 26 ~i~~~i~~~~~~~~~~f~~W~ 46 (70)
|..+.++++.- -+|+.|.
T Consensus 9 dySk~l~~~~a---k~fv~wL 26 (30)
T 1t5q_A 9 DYSIAMDKIHQ---QDFVNWL 26 (30)
T ss_dssp HHHHHHHHHHH---HHHHHHH
T ss_pred HHHHHHHHHHH---HHHHHHH
Confidence 44444444433 3677774
No 21
>2l3n_A DNA-binding protein RAP1, telomere length regulat; TAZ1; NMR {Schizosaccharomyces pombe}
Probab=23.75 E-value=36 Score=17.47 Aligned_cols=19 Identities=32% Similarity=0.496 Sum_probs=14.9
Q ss_pred hhcccCChHHHHHHHHHhh
Q psy11415 17 LYRGDVVPKDVNSAIATIK 35 (70)
Q Consensus 17 ~~rG~~~~~~i~~~i~~~~ 35 (70)
++|..+..+|+.++++.+.
T Consensus 4 ilrssvnhrevdeaidnil 22 (104)
T 2l3n_A 4 ILRSSVNHREVDEAIDNIL 22 (104)
T ss_dssp CCCCCCHHHHHHHHHHHHH
T ss_pred hhhhhcchhHHHHHHHHHH
Confidence 5677788889988888764
No 22
>2g49_C Glucagon preproprotein; protein-peptide complex, hydrolase; 2.50A {Homo sapiens} PDB: 1kx6_A 1gcn_A 1bh0_A 1nau_A
Probab=23.66 E-value=33 Score=14.09 Aligned_cols=19 Identities=21% Similarity=0.490 Sum_probs=9.4
Q ss_pred HHHHHHHHhhhhccccccccCC
Q psy11415 26 DVNSAIATIKTKRTIQFVDWCP 47 (70)
Q Consensus 26 ~i~~~i~~~~~~~~~~f~~W~p 47 (70)
|+.+.++...- -.|+.|.-
T Consensus 9 dysk~l~~~aa---k~fv~wL~ 27 (29)
T 2g49_C 9 DYSKYLDSRRA---QDFVQWLM 27 (29)
T ss_pred HHHHHHHHHHH---HHHHHHHh
Confidence 44444443322 36777754
No 23
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=22.91 E-value=15 Score=20.21 Aligned_cols=14 Identities=14% Similarity=0.653 Sum_probs=10.3
Q ss_pred ccccccccCCccee
Q psy11415 38 RTIQFVDWCPTGFK 51 (70)
Q Consensus 38 ~~~~f~~W~p~~~k 51 (70)
...-|+.|+|++.+
T Consensus 79 ~k~vfI~w~Pd~a~ 92 (144)
T 2kd5_A 79 EKLILIQWIPDTAR 92 (144)
T ss_dssp EEEEEEEECCCCSC
T ss_pred cCEEEEEECCCCCC
Confidence 34668899998764
No 24
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=22.89 E-value=14 Score=20.19 Aligned_cols=14 Identities=43% Similarity=0.971 Sum_probs=10.3
Q ss_pred ccccccccCCccee
Q psy11415 38 RTIQFVDWCPTGFK 51 (70)
Q Consensus 38 ~~~~f~~W~p~~~k 51 (70)
...-|+.|+|++.+
T Consensus 83 ~k~vfI~w~P~~a~ 96 (139)
T 1f7s_A 83 SKIFFIAWCPDIAK 96 (139)
T ss_dssp EEEEEEEECCTTSC
T ss_pred cCEEEEEECCCCCC
Confidence 34568899998764
No 25
>3nf5_A Nucleoporin NUP116; nuclear pore complex, glebs domain, structural genom 2, protein structure initiative; 1.94A {Candida glabrata}
Probab=22.74 E-value=49 Score=19.11 Aligned_cols=24 Identities=13% Similarity=0.184 Sum_probs=20.4
Q ss_pred HHHHHHHHhhhhccccccccCCcc
Q psy11415 26 DVNSAIATIKTKRTIQFVDWCPTG 49 (70)
Q Consensus 26 ~i~~~i~~~~~~~~~~f~~W~p~~ 49 (70)
.+.+.+.+++++....|+++.|.+
T Consensus 122 ~~~~~i~rLk~~~g~~FvsYd~~t 145 (164)
T 3nf5_A 122 IMERYSEKLKKIPHTHFESYDPAS 145 (164)
T ss_dssp HHHHHHHHHHHCTTCEEEEEETTT
T ss_pred HHHHHHHHHhccCCCEEEEEeCCC
Confidence 477889999998999999998864
No 26
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=21.98 E-value=86 Score=15.56 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=21.9
Q ss_pred cCChHHHHHHHHHhhhhccccccccCCccee
Q psy11415 21 DVVPKDVNSAIATIKTKRTIQFVDWCPTGFK 51 (70)
Q Consensus 21 ~~~~~~i~~~i~~~~~~~~~~f~~W~p~~~k 51 (70)
.++.+.|.+.+.+|+....+....-.|..+.
T Consensus 38 gvsr~tV~~~L~~Le~~G~I~~~g~~~~~W~ 68 (81)
T 1qbj_A 38 GTPKKEINRVLYSLAKKGKLQKEAGTPPLWK 68 (81)
T ss_dssp TCCHHHHHHHHHHHHHTTSEEEESSSSCEEE
T ss_pred CcCHHHHHHHHHHHHHCCCEEecCCCCCeeE
Confidence 3788999999999988766666543443333
No 27
>3kep_A Nucleoporin NUP145; nuclear pore complex, NUP145-N,yeast, autoproteolysi protein maturation, post-translational modification; 1.82A {Saccharomyces cerevisiae} PDB: 3kes_A*
Probab=21.76 E-value=48 Score=19.31 Aligned_cols=25 Identities=12% Similarity=0.426 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhhhccccccccCCcc
Q psy11415 25 KDVNSAIATIKTKRTIQFVDWCPTG 49 (70)
Q Consensus 25 ~~i~~~i~~~~~~~~~~f~~W~p~~ 49 (70)
.++.+.+.+++++....|+++.|.+
T Consensus 132 ~~~~~~i~rLk~~~g~~FisYd~~t 156 (174)
T 3kep_A 132 AEFQVFDRKLRSMREMNYISYNPFG 156 (174)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEETTT
T ss_pred HHHHHHHHHHhhcCCCEEEEEeCCC
Confidence 3577788999888889999988763
No 28
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=21.73 E-value=15 Score=19.92 Aligned_cols=14 Identities=29% Similarity=0.686 Sum_probs=10.5
Q ss_pred ccccccccCCccee
Q psy11415 38 RTIQFVDWCPTGFK 51 (70)
Q Consensus 38 ~~~~f~~W~p~~~k 51 (70)
..+-|+.|+|++-+
T Consensus 79 ~k~vfI~w~Pd~a~ 92 (137)
T 2i2q_A 79 NKIIFISWSPDVAP 92 (137)
T ss_dssp EEEEEEEECCTTSC
T ss_pred cCEEEEEECCCCCC
Confidence 45678899998754
No 29
>3c5t_B Exendin-4, exenatide; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} SCOP: j.6.1.1 PDB: 3c59_B*
Probab=21.31 E-value=18 Score=15.17 Aligned_cols=10 Identities=30% Similarity=0.933 Sum_probs=6.0
Q ss_pred ccccccCCcc
Q psy11415 40 IQFVDWCPTG 49 (70)
Q Consensus 40 ~~f~~W~p~~ 49 (70)
-.|+.|.-++
T Consensus 12 kdFv~WL~ng 21 (31)
T 3c5t_B 12 RLFIEWLKNG 21 (31)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhC
Confidence 4677776543
No 30
>2p1g_A Putative xylanase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Bacteroides fragilis}
Probab=20.99 E-value=30 Score=21.33 Aligned_cols=33 Identities=15% Similarity=0.349 Sum_probs=23.0
Q ss_pred cccCChHHHHHHHHHhhhh---------ccccccccCCccee
Q psy11415 19 RGDVVPKDVNSAIATIKTK---------RTIQFVDWCPTGFK 51 (70)
Q Consensus 19 rG~~~~~~i~~~i~~~~~~---------~~~~f~~W~p~~~k 51 (70)
.|+.+..++.+.+.+++-+ +.-.|.+|++++-+
T Consensus 60 ~~~~~~~~F~~~L~~iRY~~G~v~gY~sR~HyfsDW~~~n~~ 101 (249)
T 2p1g_A 60 GDEMQEGDFARNLQRIRYRDGKIDGYTSRLHYISDWINNAVR 101 (249)
T ss_dssp --CCCHHHHHHHHHHHHBGGGCCCSGGGBCCSHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHhhcCCCCcCCcCcccchHHHhhhhchh
Confidence 4556888999999988743 23457899987665
No 31
>3rnv_A HC-Pro, helper component proteinase; cysteine protease, proteolysis, hydrolase; 2.00A {Turnip mosaic virus}
Probab=20.89 E-value=89 Score=17.98 Aligned_cols=25 Identities=12% Similarity=0.194 Sum_probs=17.2
Q ss_pred CCCC-chhhhhhhhcccCChHHHHHH
Q psy11415 6 PRHG-KYMACCMLYRGDVVPKDVNSA 30 (70)
Q Consensus 6 ~~~g-~~ls~~~~~rG~~~~~~i~~~ 30 (70)
++.| +|+..++..-++++..+...-
T Consensus 39 ak~GYCYinIFlaMl~nV~e~~ak~F 64 (158)
T 3rnv_A 39 AKEGYCYINIFLAMLVNVKESQAKEF 64 (158)
T ss_dssp CCTTCTTHHHHHHHGGGSCGGGHHHH
T ss_pred eeCCcHHHHHHHHHHccCCHHHHHHH
Confidence 4556 888888777777777665543
No 32
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=20.75 E-value=16 Score=19.92 Aligned_cols=14 Identities=29% Similarity=0.895 Sum_probs=10.3
Q ss_pred ccccccccCCccee
Q psy11415 38 RTIQFVDWCPTGFK 51 (70)
Q Consensus 38 ~~~~f~~W~p~~~k 51 (70)
...-|+.|+|++.+
T Consensus 79 ~k~vfI~w~Pd~~~ 92 (141)
T 1hqz_1 79 EKIIIIGWCPDSAP 92 (141)
T ss_dssp CEEEEEEECCTTSC
T ss_pred eeEEEEEECCCCCC
Confidence 45668899998743
No 33
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=20.67 E-value=16 Score=19.74 Aligned_cols=14 Identities=29% Similarity=0.721 Sum_probs=10.4
Q ss_pred ccccccccCCccee
Q psy11415 38 RTIQFVDWCPTGFK 51 (70)
Q Consensus 38 ~~~~f~~W~p~~~k 51 (70)
..+-|+.|+|++.+
T Consensus 77 ~k~vfI~w~Pd~a~ 90 (137)
T 1cnu_A 77 NKITFILWAPDSAP 90 (137)
T ss_dssp EEEEEEEECCTTSC
T ss_pred cCEEEEEECCCCCC
Confidence 45678899998654
No 34
>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}
Probab=20.47 E-value=16 Score=20.19 Aligned_cols=13 Identities=54% Similarity=1.127 Sum_probs=9.0
Q ss_pred cccccccCCccee
Q psy11415 39 TIQFVDWCPTGFK 51 (70)
Q Consensus 39 ~~~f~~W~p~~~k 51 (70)
.+-|+.|+|++-+
T Consensus 89 k~vFI~w~Pd~a~ 101 (139)
T 2l72_A 89 KIQFVLWCPDNAP 101 (139)
T ss_dssp CEEEEEECCTTSC
T ss_pred cEEEEEECCCCCC
Confidence 4567888888653
No 35
>1j3e_A SEQA protein; protein-DNA complex, recognition of hemimethylated DNA, mismatched DNA, replication; HET: 6MA; 2.50A {Escherichia coli} SCOP: d.228.1.1 PDB: 1iu3_C
Probab=20.25 E-value=22 Score=19.49 Aligned_cols=34 Identities=15% Similarity=0.344 Sum_probs=24.2
Q ss_pred Cchhhhhh-hhcccCChHHHHHHHHHhhhhccccccc
Q psy11415 9 GKYMACCM-LYRGDVVPKDVNSAIATIKTKRTIQFVD 44 (70)
Q Consensus 9 g~~ls~~~-~~rG~~~~~~i~~~i~~~~~~~~~~f~~ 44 (70)
++||.... +|| .++.++.+..+.++.|...+|+.
T Consensus 23 ~RFl~iLs~Ly~--~~p~~F~~a~~si~GR~R~YFA~ 57 (115)
T 1j3e_A 23 NRFMLLLSTLYS--LDAQAFAEATESLHGRTRVYFAA 57 (115)
T ss_dssp HHHHHHHHHHHH--HCHHHHHHHHHTCBCSSSBCEES
T ss_pred HHHHHHHHHHHH--HCHHHHHHHHHHccCCCCceeCC
Confidence 46665553 344 36888888887799999999975
Done!