Query psy11419
Match_columns 244
No_of_seqs 82 out of 84
Neff 2.9
Searched_HMMs 46136
Date Fri Aug 16 17:56:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11419.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11419hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3849|consensus 100.0 3.2E-99 7E-104 691.5 13.3 207 1-243 40-248 (386)
2 PF10250 O-FucT: GDP-fucose pr 100.0 6.1E-45 1.3E-49 317.8 7.2 200 1-243 9-213 (351)
3 PF05830 NodZ: Nodulation prot 75.4 2.5 5.4E-05 40.5 2.9 43 193-235 135-177 (321)
4 PF01531 Glyco_transf_11: Glyc 35.2 20 0.00044 32.3 1.3 28 1-28 40-67 (298)
5 COG5142 OXR1 Oxidation resista 30.6 34 0.00073 31.2 1.9 52 44-107 57-108 (212)
6 PF01591 6PF2K: 6-phosphofruct 26.2 19 0.0004 32.3 -0.5 26 181-207 14-39 (222)
7 KOG1584|consensus 21.0 49 0.0011 31.5 1.2 74 148-223 208-287 (297)
8 PF08520 DUF1748: Fungal prote 20.7 58 0.0013 24.9 1.3 31 190-220 33-63 (70)
9 PF04066 MrpF_PhaF: Multiple r 19.8 70 0.0015 22.6 1.5 14 8-21 42-55 (55)
10 cd05380 SCP_euk SCP_euk: SCP-l 18.4 91 0.002 23.6 2.0 20 202-221 30-49 (144)
No 1
>KOG3849|consensus
Probab=100.00 E-value=3.2e-99 Score=691.50 Aligned_cols=207 Identities=53% Similarity=1.082 Sum_probs=204.3
Q ss_pred CccchhhhhhhHHHHHhhcCceEeeCCeeecccCCCCccccCCcccccccccccccceeeHHHHHHhhCCCCCCCCCeee
Q psy11419 1 RFGNQADNFLGALALAKGINRTLVLPPWVEYRYGEPKSIQVPFDTYFQVEPLQEYHRVMTMEKFMQDIAPHIWPPHKRIA 80 (244)
Q Consensus 1 RFGNQadhFLG~LafAk~lNRTLVLPPWieY~h~~~~sv~IPF~~yFqVepL~eYhRVI~MEeFM~~iap~~WP~~~R~~ 80 (244)
|||||||||||+|||||+|||||||||||||+|.+..|.||||+.||+|+||++|||||||+|||++|||++||+++|+|
T Consensus 40 RFGNQaDhFLGsLAFAKaLnRTL~lPpwiEy~~pe~~n~~vpf~~yF~vepl~~YhRVitm~dFm~klapthwp~~~Rva 119 (386)
T KOG3849|consen 40 RFGNQADHFLGSLAFAKALNRTLVLPPWIEYKHPETKNLMVPFEFYFQVEPLAKYHRVITMQDFMKKLAPTHWPGTPRVA 119 (386)
T ss_pred cccchHHHHHHHHHHHHHhcccccCCcchhccCCcccccccchhheeecccHhhhhhheeHHHHHHHhCcccCCCCccee
Confidence 89999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred eeeecC--CCCCCCCCCCCCCCCCCcccccccceeecceeeccccccccCchhHhhhhhcCCCCCCCCCccccccCCCcc
Q psy11419 81 FCYMAR--GSTNESSCNAKEGNPFGPFWDTYGIDFVGSEFYGPLHYDVHHSDIAEHWKMRYPSDDWPVSGYCRTMGRTPS 158 (244)
Q Consensus 81 fC~~~r--~~~~~~~C~aKeGNPFGpFWD~~~idFv~se~~~~l~~d~~~~~~~~~W~~~yP~~~~P~~~~~~~~~~~~~ 158 (244)
||+... ++.++++|+||||||||||||+|.|+||+||+|++|+||+++...+++|.+|||+++||
T Consensus 120 ~c~k~a~qr~pdkp~Ch~KeGNPFGPfWDqfhvsFv~sE~f~~i~Fd~~~~~~~~kW~~kfp~eeyP------------- 186 (386)
T KOG3849|consen 120 ICDKSAAQRSPDKPGCHSKEGNPFGPFWDQFHVSFVGSEYFGDIGFDLNQMGSRKKWLEKFPSEEYP------------- 186 (386)
T ss_pred eeehhhhccCCCCCCCcccCCCCCCCchhheEeeeeccccccccccchhhcchHHHHHhhCCcccCc-------------
Confidence 999986 78899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCccccccCCCCcccceEEecCCCCCCCCccccccccccccccHHHHHHHHHHHHhhCCCCCeEEEEeecCCCh
Q psy11419 159 LAAIQTLNPLGKKSLSNFQCFPVIAFTGAPGSFPVQDENRVLQKYLVWTEKIANQAKTFIKNKLPAGAYIGIHLRNGIDW 238 (244)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~VlAf~gAPasFPv~~e~r~lqkYl~Ws~~i~~~a~~fI~~~L~~gpfvgIHLRng~DW 238 (244)
||||+||||+|||+.||+.|||||+||++|+++||+||..+|+| ||||||||||+||
T Consensus 187 ----------------------VLAf~gAPA~FPv~~e~~~lQkYl~WS~r~~e~~k~fI~a~L~r-pfvgiHLRng~DW 243 (386)
T KOG3849|consen 187 ----------------------VLAFSGAPAPFPVKGEVWSLQKYLRWSSRITEQAKKFISANLAR-PFVGIHLRNGADW 243 (386)
T ss_pred ----------------------eeeecCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhcCc-ceeEEEeecCchH
Confidence 99999999999999999999999999999999999999999999 9999999999999
Q ss_pred hhhcC
Q psy11419 239 PRLLG 243 (244)
Q Consensus 239 ~raC~ 243 (244)
+|||+
T Consensus 244 vraCe 248 (386)
T KOG3849|consen 244 VRACE 248 (386)
T ss_pred HHHHH
Confidence 99997
No 2
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.
Probab=100.00 E-value=6.1e-45 Score=317.78 Aligned_cols=200 Identities=38% Similarity=0.697 Sum_probs=148.5
Q ss_pred CccchhhhhhhHHHHHhhcCceEeeCCeeecccCCCC--ccccCCccccccccccccc-ceeeHHHHHHhhCCCCCCCCC
Q psy11419 1 RFGNQADNFLGALALAKGINRTLVLPPWVEYRYGEPK--SIQVPFDTYFQVEPLQEYH-RVMTMEKFMQDIAPHIWPPHK 77 (244)
Q Consensus 1 RFGNQadhFLG~LafAk~lNRTLVLPPWieY~h~~~~--sv~IPF~~yFqVepL~eYh-RVI~MEeFM~~iap~~WP~~~ 77 (244)
+||||.++|+++++||+.||||||||||..++||+.. +.+|||+++||++.|++++ +||+|++|| |.+|+...
T Consensus 9 GfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~----~~~~~~~~ 84 (351)
T PF10250_consen 9 GFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFL----PKHWDEVF 84 (351)
T ss_dssp SHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHH----HHHS-GGG
T ss_pred CHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheec----cchhcccc
Confidence 6999999999999999999999999999999998764 5899999999999999999 999999999 99999999
Q ss_pred eeeeeeecCCCCCCCCCCCCCCCCCCcccccccceeecceeeccc-cccccCchhHhhhhhcCCCCCCCCCccccccCCC
Q psy11419 78 RIAFCYMARGSTNESSCNAKEGNPFGPFWDTYGIDFVGSEFYGPL-HYDVHHSDIAEHWKMRYPSDDWPVSGYCRTMGRT 156 (244)
Q Consensus 78 R~~fC~~~r~~~~~~~C~aKeGNPFGpFWD~~~idFv~se~~~~l-~~d~~~~~~~~~W~~~yP~~~~P~~~~~~~~~~~ 156 (244)
|+++|+....+..... ++|+|+|++++||.+.+++..+++++.. .|--.......+|.++ .+++
T Consensus 85 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----------- 149 (351)
T PF10250_consen 85 RLQYCWSPWESGSWDD-NMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNEN---SEHP----------- 149 (351)
T ss_dssp -EEEESS-B---------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHH---TT-S-----------
T ss_pred chhhcccccccccchh-hccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccc---cccc-----------
Confidence 9999999985554323 6899999999999999999998844433 3222244566777777 8888
Q ss_pred cchhhhhhcCccccccCCCCcccceEEecCCCCCCCCccccccccccccccHHHHHHHHHHHHhhC-CCCCeEEEEeecC
Q psy11419 157 PSLAAIQTLNPLGKKSLSNFQCFPVIAFTGAPGSFPVQDENRVLQKYLVWTEKIANQAKTFIKNKL-PAGAYIGIHLRNG 235 (244)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~VlAf~gAPasFPv~~e~r~lqkYl~Ws~~i~~~a~~fI~~~L-~~gpfvgIHLRng 235 (244)
|++|++++..|+.+.+++.+||||+|++.|.+.|++||++.+ ..|||||||||.|
T Consensus 150 ------------------------~i~~~~~~~~~~~~~~~~~~~r~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~ 205 (351)
T PF10250_consen 150 ------------------------VIAFTGFESRLPDNYLDRDLQRYLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRG 205 (351)
T ss_dssp ------------------------EEEESS-SS-SS--GGGGGGGGG--B-HHHHHHHHHHHHHH----SSEEEEEE--S
T ss_pred ------------------------cceeccccccchhcccCccceEEEecCHHHHHHHHHHHHHhhcccCceEEEeeccc
Confidence 999999999999999999999999999999999999999999 7789999999999
Q ss_pred CChhhhcC
Q psy11419 236 IDWPRLLG 243 (244)
Q Consensus 236 ~DW~raC~ 243 (244)
.||.+.|+
T Consensus 206 ~D~~~~C~ 213 (351)
T PF10250_consen 206 KDWFSACE 213 (351)
T ss_dssp HHHHHHHC
T ss_pred CchHhhcc
Confidence 99999996
No 3
>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation. NodZ is required for the addition of a 2-O-methylfucose residue to the terminal reducing N-acetylglucosamine of the nodulation signal. This substitution is essential for the biological activity of this molecule. Mutations in nodZ result in defective nodulation. nodZ represents a unique nodulation gene that is not under the control of NodD and yet is essential for the synthesis of an active nodulation signal [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3SIX_A 2HLH_A 2HHC_A 3SIW_A 2OCX_A.
Probab=75.44 E-value=2.5 Score=40.51 Aligned_cols=43 Identities=19% Similarity=0.342 Sum_probs=34.5
Q ss_pred CccccccccccccccHHHHHHHHHHHHhhCCCCCeEEEEeecC
Q psy11419 193 VQDENRVLQKYLVWTEKIANQAKTFIKNKLPAGAYIGIHLRNG 235 (244)
Q Consensus 193 v~~e~r~lqkYl~Ws~~i~~~a~~fI~~~L~~gpfvgIHLRng 235 (244)
.++-.|.|.+.++=...|..+.+.+..+++....-||||.|-|
T Consensus 135 ~~~aeR~if~slkpR~eIqarID~iy~ehf~g~~~IGVHVRhG 177 (321)
T PF05830_consen 135 DEEAEREIFSSLKPRPEIQARIDAIYREHFAGYSVIGVHVRHG 177 (321)
T ss_dssp -HHHHHHHHHHS-B-HHHHHHHHHHHHHHTTTSEEEEEEE---
T ss_pred hhHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCCceEEEEEecc
Confidence 3566799999999999999999999999999888999999966
No 4
>PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 11 GT11 from CAZY comprises enzymes with only one known activity; galactoside 2-L-fucosyltransferase (2.4.1.69 from EC). Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 2-L-fucosyltransferase 1 (2.4.1.69 from EC) and Galactoside 2-L-fucosyltransferase 2 (2.4.1.69 from EC) belong to the Hh blood group system and are associated with H/h and Se/se antigens.; GO: 0008107 galactoside 2-alpha-L-fucosyltransferase activity, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=35.23 E-value=20 Score=32.34 Aligned_cols=28 Identities=36% Similarity=0.386 Sum_probs=24.9
Q ss_pred CccchhhhhhhHHHHHhhcCceEeeCCe
Q psy11419 1 RFGNQADNFLGALALAKGINRTLVLPPW 28 (244)
Q Consensus 1 RFGNQadhFLG~LafAk~lNRTLVLPPW 28 (244)
|+|||+=++.-.+++||-++++.++|.+
T Consensus 40 ~LGNqmfqya~l~~lak~~~~~~~i~~~ 67 (298)
T PF01531_consen 40 RLGNQMFQYASLYGLAKLNGRTAFIPIS 67 (298)
T ss_pred hHHHHHhHHHHHHHHHHhcCCccccchH
Confidence 7899999988889999988888888865
No 5
>COG5142 OXR1 Oxidation resistance protein [DNA replication, recombination, and repair]
Probab=30.61 E-value=34 Score=31.25 Aligned_cols=52 Identities=23% Similarity=0.679 Sum_probs=39.3
Q ss_pred cccccccccccccceeeHHHHHHhhCCCCCCCCCeeeeeeecCCCCCCCCCCCCCCCCCCcccc
Q psy11419 44 DTYFQVEPLQEYHRVMTMEKFMQDIAPHIWPPHKRIAFCYMARGSTNESSCNAKEGNPFGPFWD 107 (244)
Q Consensus 44 ~~yFqVepL~eYhRVI~MEeFM~~iap~~WP~~~R~~fC~~~r~~~~~~~C~aKeGNPFGpFWD 107 (244)
++|-.+=+|+ |.--++++|.+..+|.-|| ..|+||.- -|.-|+|.=||-|-.
T Consensus 57 t~W~llySl~--~~G~Sl~t~y~~~~~~~~~-frrvg~VL---------a~rd~dgd~FGaf~~ 108 (212)
T COG5142 57 TSWRLLYSLF--ENGFSLRTFYESFGENEWP-FRRVGFVL---------ACRDKDGDLFGAFFE 108 (212)
T ss_pred HHHHHHHHHh--hcchhHHHHHHHhCcccCc-ccCceEEE---------EEEcCCCCEeeeech
Confidence 3444444553 4566889999999999999 88888775 477899999998643
No 6
>PF01591 6PF2K: 6-phosphofructo-2-kinase; InterPro: IPR013079 6-Phosphofructo-2-kinase (2.7.1.105 from EC, 3.1.3.46 from EC) is a bifunctional enzyme that catalyses both the synthesis and the degradation of fructose-2, 6-bisphosphate. The fructose-2,6-bisphosphatase reaction involves a phosphohistidine intermediate. The catalytic pathway is: ATP + D-fructose 6-phosphate = ADP + D-fructose 2,6-bisphosphate D-fructose 2,6-bisphosphate + H2O = 6-fructose 6-phosphate + Pi The enzyme is important in the regulation of hepatic carbohydrate metabolism and is found in greatest quantities in the liver, kidney and heart. In mammals, several genes often encode different isoforms, each of which differs in its tissue distribution and enzymatic activity []. The family described here bears a resemblance to the ATP-driven phospho-fructokinases, however, they share little sequence similarity, although a few residues seem key to their interaction with fructose 6-phosphate []. This domain forms the N-terminal region of this enzyme, while IPR013078 from INTERPRO forms the C-terminal domain.; GO: 0003873 6-phosphofructo-2-kinase activity, 0005524 ATP binding, 0006000 fructose metabolic process; PDB: 2DWO_A 3QPW_A 3QPV_A 3QPU_A 2I1V_B 2DWP_A 2AXN_A 1K6M_B 3BIF_A 2BIF_A ....
Probab=26.24 E-value=19 Score=32.29 Aligned_cols=26 Identities=35% Similarity=0.556 Sum_probs=21.0
Q ss_pred eEEecCCCCCCCCcccccccccccccc
Q psy11419 181 VIAFTGAPGSFPVQDENRVLQKYLVWT 207 (244)
Q Consensus 181 VlAf~gAPasFPv~~e~r~lqkYl~Ws 207 (244)
||++.|.||. =..-=-+.|++||.|.
T Consensus 14 ~ivmVGLPAr-GKs~ia~kl~ryL~w~ 39 (222)
T PF01591_consen 14 VIVMVGLPAR-GKSYIARKLCRYLNWL 39 (222)
T ss_dssp EEEEESSTTS-SHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCC-CHHHHHHHHHHHHhhc
Confidence 8999999997 3333448899999996
No 7
>KOG1584|consensus
Probab=21.04 E-value=49 Score=31.48 Aligned_cols=74 Identities=14% Similarity=0.104 Sum_probs=34.7
Q ss_pred ccccccCCCcchhhhhhc------CccccccCCCCcccceEEecCCCCCCCCccccccccccccccHHHHHHHHHHHHhh
Q psy11419 148 GYCRTMGRTPSLAAIQTL------NPLGKKSLSNFQCFPVIAFTGAPGSFPVQDENRVLQKYLVWTEKIANQAKTFIKNK 221 (244)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~VlAf~gAPasFPv~~e~r~lqkYl~Ws~~i~~~a~~fI~~~ 221 (244)
--|+-||++.+...++.+ +-.-...|+|..+-+.=-....-+.|=.+.+...-+.|+ |..+.++-+..++++
T Consensus 208 rlaeFLg~~~~~Ee~~~~~~~~~~~~~~~n~l~nle~n~~~~~~~~~~~F~RKG~vGDWKn~~--T~~~~ekfD~~~eek 285 (297)
T KOG1584|consen 208 KLAEFLGCPFTKEEEDKGVVHLSFELCSLNPLSNLEVNKTEKLLHKISPFFRKGEVGDWKNYL--TPEMNEKFDKIYEEK 285 (297)
T ss_pred HHHHHhCCCCCHHHHhhhhHHHHHHHHhhccccCceecccccccccchhhhcCCCcccccccC--CHHHHHHHHHHHHHH
Confidence 345667777766655421 111112234443322111111113344444444445554 566677777777777
Q ss_pred CC
Q psy11419 222 LP 223 (244)
Q Consensus 222 L~ 223 (244)
|.
T Consensus 286 m~ 287 (297)
T KOG1584|consen 286 ME 287 (297)
T ss_pred hc
Confidence 75
No 8
>PF08520 DUF1748: Fungal protein of unknown function (DUF1748); InterPro: IPR013726 This is a family of fungal proteins of unknown function.
Probab=20.72 E-value=58 Score=24.91 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=26.4
Q ss_pred CCCCccccccccccccccHHHHHHHHHHHHh
Q psy11419 190 SFPVQDENRVLQKYLVWTEKIANQAKTFIKN 220 (244)
Q Consensus 190 sFPv~~e~r~lqkYl~Ws~~i~~~a~~fI~~ 220 (244)
.++..+-...+++||.|-|-+.+++..+.+.
T Consensus 33 ~~~n~~~r~~~~~YL~~GE~~~D~~va~~~~ 63 (70)
T PF08520_consen 33 KIENKDIRNWIHKYLNVGEWVFDKSVAYAGS 63 (70)
T ss_pred hcCChhHHHHHHHHcchhHHHHHHHHHHhcc
Confidence 4566666788999999999999999998876
No 9
>PF04066 MrpF_PhaF: Multiple resistance and pH regulation protein F (MrpF / PhaF); InterPro: IPR007208 Members of the PhaF/MrpF family are predicted to be integral membrane proteins with three transmembrane regions, involved in regulation of pH. PhaF is part of a potassium efflux system involved in pH regulation. It is also involved in symbiosis in Rhizobium meliloti (Sinorhizobium meliloti) []. MrpF is a part of a Na+/H+ antiporter complex, also involved in pH homeostasis. MrpF is thought to be an efflux system for Na+ and cholate []. The Mrp system in Gram-positive species may also have primary energisation capacities [].; GO: 0015075 ion transmembrane transporter activity, 0034220 ion transmembrane transport, 0016021 integral to membrane
Probab=19.83 E-value=70 Score=22.63 Aligned_cols=14 Identities=36% Similarity=0.736 Sum_probs=12.1
Q ss_pred hhhhHHHHHhhcCc
Q psy11419 8 NFLGALALAKGINR 21 (244)
Q Consensus 8 hFLG~LafAk~lNR 21 (244)
.|+|++++||=+.|
T Consensus 42 ~Fvgtva~arfl~r 55 (55)
T PF04066_consen 42 GFVGTVAFARFLER 55 (55)
T ss_pred HHHHHHHHHHHHcC
Confidence 58999999998765
No 10
>cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.
Probab=18.41 E-value=91 Score=23.61 Aligned_cols=20 Identities=25% Similarity=0.486 Sum_probs=17.4
Q ss_pred ccccccHHHHHHHHHHHHhh
Q psy11419 202 KYLVWTEKIANQAKTFIKNK 221 (244)
Q Consensus 202 kYl~Ws~~i~~~a~~fI~~~ 221 (244)
.-|+|++++++.|+.+.+.-
T Consensus 30 ~~l~Wd~~La~~A~~~a~~C 49 (144)
T cd05380 30 PKLKWDDELAALAQNWAKTC 49 (144)
T ss_pred CcceeCHHHHHHHHHHHhcC
Confidence 35889999999999998875
Done!