BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1142
(442 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O88984|NXF1_RAT Nuclear RNA export factor 1 OS=Rattus norvegicus GN=Nxf1 PE=2 SV=1
Length = 618
Score = 306 bits (783), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/437 (38%), Positives = 261/437 (59%), Gaps = 12/437 (2%)
Query: 11 IVLVSSATPYV---ELNNEIKDKIKLVMAKRYNGDNKALDLSKFYADPDFVEANMFVPLD 67
I++ SSA PY+ EL E +++KL+M+KRY+G +ALDL +DPD V N+ V L+
Sbjct: 188 IIINSSAPPYIVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 247
Query: 68 RSNVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLAT 127
R M + II EN+P+L +LNLS N+LY + + S+ + P +KIL L+ N +K
Sbjct: 248 RRGCMAAALRIIEENIPELLSLNLSNNRLYKLDDMSSIVQKAPNLKILNLSGNELKSEWE 307
Query: 128 IRTLESLSNLEELRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLDDIQLPPPIVFDLEDN 187
+ ++ L LEEL L++NP + F +Q Y S +R+ FPKLL+LD +LPPPI FD+E
Sbjct: 308 LDKIKGLK-LEELWLDRNPMCDTFLDQSTYISTIRERFPKLLRLDGHELPPPIAFDVEAP 366
Query: 188 IELPKPQGSFLCHPEARDILRAFLEQYFALFDTESRAGLIDAYHENAQYSLVVTQGLGN- 246
LP +GS+ + ++ FL+QY+A++D+ R GL+DAYH+ A SL N
Sbjct: 367 TMLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSTPSNPQNP 426
Query: 247 -NHLLNNMLANSRNLLRIEEPQRQKSLLSVGKADILRALRFLPATKHDLLSFTCDCPLYT 305
H L +SRN+ +I++ + LL + +++ L LP T HD+ SF D T
Sbjct: 427 VRHNLAKYFNDSRNVKKIKDTTTRFRLLKHTRLNVVAFLNELPKTHHDVNSFVVDISAQT 486
Query: 306 PGLIQFSVCGLYEEITTGTKNKSKLIRAFNRAFLLVPRSGGGFAITNDQLFITSATPEQA 365
L+ FSV G+++E+ +++ +RAF R F+ VP S G I ND+LF+ +A+PE+
Sbjct: 487 STLLCFSVNGVFKEVDGKSRDS---LRAFTRTFIAVPASNSGLCIVNDELFVRNASPEEI 543
Query: 366 EKAFSSQVTASESTCSTPVSNEILIKQNMVKALSQVSGMNLNFSEKCLNEVQWDYDQAVT 425
++AF+ + + S+PV +Q+M++A S SGMNL +S+KCL + WDY ++
Sbjct: 544 QRAFA---MPAPTPSSSPVPTLSQEQQDMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQ 600
Query: 426 IFNQLKAKNALPSEAFI 442
F LKAK +P AF+
Sbjct: 601 AFTHLKAKGEIPEVAFM 617
>sp|Q99JX7|NXF1_MOUSE Nuclear RNA export factor 1 OS=Mus musculus GN=Nxf1 PE=1 SV=3
Length = 618
Score = 298 bits (763), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 270/448 (60%), Gaps = 13/448 (2%)
Query: 1 RIKTVTNHTLIVLVSSATPYVELNNEIK----DKIKLVMAKRYNGDNKALDLSKFYADPD 56
+I+ N + ++++++ P + NE+K +++KL+M+KRY+G+ +ALDL +DPD
Sbjct: 177 KIQDRENRRISIIINASAPPYTVQNELKPEQIEQLKLIMSKRYDGNQQALDLKGLRSDPD 236
Query: 57 FVEANMFVPLDRSNVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILY 116
V N+ V L+R + M + II EN+P+L +LNLS N+LY + + S+ + P +K L
Sbjct: 237 LVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSSNRLYKLDDMSSIVQKAPNLKTLN 296
Query: 117 LAHNNIKDLATIRTLESLSNLEELRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLDDIQL 176
L+ N +K + ++ L LEEL L++NP + F +Q +Y S +R+ FPKLL+LD +L
Sbjct: 297 LSGNELKTERELDKIKGLK-LEELWLDRNPMCDNFGDQSSYISAIRERFPKLLRLDGHEL 355
Query: 177 PPPIVFDLEDNIELPKPQGSFLCHPEARDILRAFLEQYFALFDTESRAGLIDAYHENAQY 236
PPPI FD+E LP +GS+ + ++ FL+QY+ ++D+ R GL+ AYH+ A
Sbjct: 356 PPPISFDVEAPTMLPPCKGSYFGTENLKSLVLRFLQQYYVIYDSGDRQGLLYAYHDGACC 415
Query: 237 SLVVTQGLGN--NHLLNNMLANSRNLLRIEEPQRQKSLLSVGKADILRALRFLPATKHDL 294
SL + N L + +SRN+ +++EP ++ LL + +++ L LP T+HD+
Sbjct: 416 SLSIPYNPQNPVRKNLAEYVKDSRNVKKLKEPTQRFRLLKHTRLNVVAFLNELPKTQHDV 475
Query: 295 LSFTCDCPLYTPGLIQFSVCGLYEEITTGTKNKSKLIRAFNRAFLLVPRSGGGFAITNDQ 354
+F D T L+ FSV G+++E+ +++ +RAF R F+ VP S G I ND+
Sbjct: 476 NAFVVDISAQTSTLLCFSVNGVFKEVDGKSRDS---LRAFTRTFIAVPASNSGLCIVNDE 532
Query: 355 LFITSATPEQAEKAFSSQVTASESTCSTPVSNEILIKQNMVKALSQVSGMNLNFSEKCLN 414
LF+ +A+PE+ ++AF+ ++ + S+PV +Q M++A S SGMNL +S+KCL
Sbjct: 533 LFVRNASPEEIQRAFA---MSAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQ 589
Query: 415 EVQWDYDQAVTIFNQLKAKNALPSEAFI 442
+ WDY ++ F LKAK +P AF+
Sbjct: 590 DNNWDYTRSAQAFTLLKAKGEIPEVAFM 617
>sp|Q9UBU9|NXF1_HUMAN Nuclear RNA export factor 1 OS=Homo sapiens GN=NXF1 PE=1 SV=1
Length = 619
Score = 295 bits (754), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 260/438 (59%), Gaps = 14/438 (3%)
Query: 11 IVLVSSATPYV---ELNNEIKDKIKLVMAKRYNGDNKALDLSKFYADPDFVEANMFVPLD 67
I++ SSA P+ EL E +++KL+M+KRY+G +ALDL +DPD V N+ V L+
Sbjct: 189 IIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 248
Query: 68 RSNVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLAT 127
R + M + II EN+P+L +LNLS N+LY + + S+ + P +KIL L+ N +K
Sbjct: 249 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERE 308
Query: 128 IRTLESLSNLEELRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLDDIQLPPPIVFDLEDN 187
+ ++ L LEEL L+ N + F +Q Y S +R+ FPKLL+LD +LPPPI FD+E
Sbjct: 309 LDKIKGL-KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAFDVEAP 367
Query: 188 IELPKPQGSFLCHPEARDILRAFLEQYFALFDTESRAGLIDAYHENAQYSL---VVTQGL 244
LP +GS+ + ++ FL+QY+A++D+ R GL+DAYH+ A SL + Q
Sbjct: 368 TTLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNP 427
Query: 245 GNNHLLNNMLANSRNLLRIEEPQRQKSLLSVGKADILRALRFLPATKHDLLSFTCDCPLY 304
+ L +SRN+ ++++P + LL + +++ L LP T+HD+ SF D
Sbjct: 428 ARSSLA-EYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFVVDISAQ 486
Query: 305 TPGLIQFSVCGLYEEITTGTKNKSKLIRAFNRAFLLVPRSGGGFAITNDQLFITSATPEQ 364
T L+ FSV G+++E+ +++ +RAF R F+ VP S G I ND+LF+ +A+ E+
Sbjct: 487 TSTLLCFSVNGVFKEVDGKSRDS---LRAFTRTFIAVPASNSGLCIVNDELFVRNASSEE 543
Query: 365 AEKAFSSQVTASESTCSTPVSNEILIKQNMVKALSQVSGMNLNFSEKCLNEVQWDYDQAV 424
++AF+ + + S+PV +Q M++A S SGMNL +S+KCL + WDY ++
Sbjct: 544 IQRAFA---MPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSA 600
Query: 425 TIFNQLKAKNALPSEAFI 442
F LKAK +P AF+
Sbjct: 601 QAFTHLKAKGEIPEVAFM 618
>sp|P58797|NXF1_COTJA Nuclear RNA export factor 1 OS=Coturnix coturnix japonica GN=NXF1
PE=1 SV=1
Length = 616
Score = 293 bits (751), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/448 (36%), Positives = 265/448 (59%), Gaps = 13/448 (2%)
Query: 1 RIKTVTNHTLIVLVSSATPYVELNNEIK----DKIKLVMAKRYNGDNKALDLSKFYADPD 56
+I N+ ++++++S+ P L NE+K +++K+ M+KRY+G +ALDL DPD
Sbjct: 175 KITDRDNYKVVIIINSSAPPPSLQNELKPEEIEQLKVCMSKRYDGAQRALDLKGLRVDPD 234
Query: 57 FVEANMFVPLDRSNVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILY 116
V ++ V L++ + M V II EN+P+L +LNLS NKLY + L LA +K+L
Sbjct: 235 LVSQSIDVVLNQRSCMMVVLRIIEENIPELQSLNLSSNKLYRLDDLAELAIKAAGLKVLD 294
Query: 117 LAHNNIKDLATIRTLESLSNLEELRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLDDIQL 176
L+ N +K + ++ L LEEL L+ NP + F +Q +Y S VR+ FPKLL+LD +L
Sbjct: 295 LSRNELKSERELDKVKGL-KLEELWLDGNPLCDGFRDQSSYISSVRERFPKLLRLDGHEL 353
Query: 177 PPPIVFDLEDNIELPKPQGSFLCHPEARDILRAFLEQYFALFDTESRAGLIDAYHENAQY 236
PPPI FD+E + LP +GS+ + + ++ FL+QY++++D+ R GL+DAYH+ A
Sbjct: 354 PPPIAFDVEAPVTLPPCKGSYFGSDDLKVLVLRFLQQYYSIYDSSDRQGLLDAYHDGACC 413
Query: 237 SLVVTQGLGN--NHLLNNMLANSRNLLRIEEPQRQKSLLSVGKADILRALRFLPATKHDL 294
SL + G N + LN +SRN+ ++++P + LL + +++ L LP T+HD+
Sbjct: 414 SLSIPFGPQNPPRNTLNEYFKDSRNVKKLKDPTMRFKLLKHTRLNVVAFLNELPRTQHDV 473
Query: 295 LSFTCDCPLYTPGLIQFSVCGLYEEITTGTKNKSKLIRAFNRAFLLVPRSGGGFAITNDQ 354
SF D T L+ F+V G+++E+ +++ +RAF R F+ VP G I ND+
Sbjct: 474 SSFVVDVCAQTNTLLCFAVHGIFKEVDGKSRDS---VRAFTRMFIAVPAGNTGLCIVNDK 530
Query: 355 LFITSATPEQAEKAFSSQVTASESTCSTPVSNEILIKQNMVKALSQVSGMNLNFSEKCLN 414
LF+ +AT ++ KAF S+ ++ E +Q M+ A + SGMNL +S+KCL
Sbjct: 531 LFVRNATADELRKAFVMPAPTPSSSPVPSLAAE---QQEMLAAFAMQSGMNLEWSQKCLQ 587
Query: 415 EVQWDYDQAVTIFNQLKAKNALPSEAFI 442
+ WDY +A +F QLK + +P AF+
Sbjct: 588 DNDWDYGRAGQVFTQLKLEGKIPEVAFL 615
>sp|Q1RMS5|NXF1_BOVIN Nuclear RNA export factor 1 OS=Bos taurus GN=NXF1 PE=2 SV=1
Length = 620
Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 251/423 (59%), Gaps = 9/423 (2%)
Query: 22 ELNNEIKDKIKLVMAKRYNGDNKALDLSKFYADPDFVEANMFVPLDRSNVMTSVCNIINE 81
EL E +++KL+M+KRY+G +ALDL +DPD V N+ V L+R + M + II E
Sbjct: 204 ELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEE 263
Query: 82 NLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELR 141
N+P+L +LNLS NKLY + L S+ + P +KIL L+ N +K + ++ L LEEL
Sbjct: 264 NIPELLSLNLSNNKLYRLDDLSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELW 322
Query: 142 LEKNPWTECFNEQDAYTSEVRKIFPKLLKLDDIQLPPPIVFDLEDNIELPKPQGSFLCHP 201
L+ N + F +Q Y S VR+ FPKLL+LD +LPPPI FD+E LP +GS+
Sbjct: 323 LDGNTLCDTFRDQSTYISAVRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGTE 382
Query: 202 EARDILRAFLEQYFALFDTESRAGLIDAYHENAQYSLVVTQGLGNNHLLN--NMLANSRN 259
++++ FL+QY+A++D+ R L+DAYH+ A SL + N N +SRN
Sbjct: 383 TLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLSIPFTPQNPARSNLAEYFKDSRN 442
Query: 260 LLRIEEPQRQKSLLSVGKADILRALRFLPATKHDLLSFTCDCPLYTPGLIQFSVCGLYEE 319
+ ++++P + LL + +++ L LP T+HD+ SF D T L+ FSV G+++E
Sbjct: 443 VKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFVVDISAQTSTLLCFSVNGVFKE 502
Query: 320 ITTGTKNKSKLIRAFNRAFLLVPRSGGGFAITNDQLFITSATPEQAEKAFSSQVTASEST 379
+ +++ +RAF R F+ VP S G I ND+LF+ +A+ ++ ++AF+ + +
Sbjct: 503 VDGKSRDS---LRAFTRTFVAVPASNSGLCIVNDELFVRNASADEIQRAFA---MPAPTP 556
Query: 380 CSTPVSNEILIKQNMVKALSQVSGMNLNFSEKCLNEVQWDYDQAVTIFNQLKAKNALPSE 439
S+PV +Q M++A S SGMNL +S+KCL + WDY ++ F LKAK +P
Sbjct: 557 SSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFTHLKAKGEIPEV 616
Query: 440 AFI 442
AF+
Sbjct: 617 AFM 619
>sp|Q5R752|NXF1_PONAB Nuclear RNA export factor 1 OS=Pongo abelii GN=NXF1 PE=3 SV=1
Length = 626
Score = 286 bits (732), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/445 (36%), Positives = 259/445 (58%), Gaps = 21/445 (4%)
Query: 11 IVLVSSATPYV---ELNNEIKDKIKLVMAKRYNGDNKALDLSKFYADPDFVEANMFVPLD 67
I++ SA P+ EL E +++KL+M+KRY+G +ALDL +DPD V N+ V L+
Sbjct: 189 IIINPSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVSQNIDVVLN 248
Query: 68 RSNVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLAT 127
R + M + +I EN+P+L +LNLS N+LY + + S+ + +P +KIL L+ N +K
Sbjct: 249 RRSCMAATLRVIEENIPELLSLNLSHNRLYRLDDMSSIVQKVPNLKILNLSGNELKSERE 308
Query: 128 IRTLESLSNLEELRLEKNPWTECFNEQDAY-------TSEVRKIFPKLLKLDDIQLPPPI 180
+ ++ L LEEL L+ N + F +Q Y S +R+ FPKLL+LD +LPPPI
Sbjct: 309 LDKIKGL-KLEELWLDGNSLCDTFRDQSTYIRSVVACVSAIRERFPKLLRLDGHELPPPI 367
Query: 181 VFDLEDNIELPKPQGSFLCHPEARDILRAFLEQYFALFDTESRAGLIDAYHENAQYSL-- 238
FD+E LP +GS+ + ++ FL+QY+A++D+ R GL+DAYH+ A SL
Sbjct: 368 AFDVEAPTTLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSI 427
Query: 239 -VVTQGLGNNHLLNNMLANSRNLLRIEEPQRQKSLLSVGKADILRALRFLPATKHDLLSF 297
+ Q + L +SRN+ ++++P + LL + +++ L LP T+HD+ SF
Sbjct: 428 PFIPQNPARSSLA-EYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSF 486
Query: 298 TCDCPLYTPGLIQFSVCGLYEEITTGTKNKSKLIRAFNRAFLLVPRSGGGFAITNDQLFI 357
D T L FSV G+++E+ +++ +RAF R F+ VP S G I ND+LF+
Sbjct: 487 VVDISAQTSTLPCFSVNGVFKEVDGKSRDS---LRAFTRTFIAVPASNSGLCIVNDELFV 543
Query: 358 TSATPEQAEKAFSSQVTASESTCSTPVSNEILIKQNMVKALSQVSGMNLNFSEKCLNEVQ 417
+A+ E+ ++AF+ + + S+PV +Q M++A S SGMNL +S+KCL +
Sbjct: 544 RNASSEEIQRAFA---MPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNN 600
Query: 418 WDYDQAVTIFNQLKAKNALPSEAFI 442
WDY ++ F LKAK +P AF+
Sbjct: 601 WDYTRSAQAFTHLKAKGEIPEVAFM 625
>sp|Q9U1H9|NXF1_DROME Nuclear RNA export factor 1 OS=Drosophila melanogaster GN=sbr PE=1
SV=2
Length = 672
Score = 272 bits (696), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 170/498 (34%), Positives = 262/498 (52%), Gaps = 67/498 (13%)
Query: 7 NHTLIVLVSSATPYVELNNEIKDKIKLVMAKRYNGDNKALDLSKFYADPDFVEANMFVPL 66
+ L+ V S P V +++ K+K+K+ MAKRYN KALDLS+F+ADPD + +F PL
Sbjct: 179 GYRLMPRVRSGIPLVAIDDAFKEKMKVTMAKRYNIQTKALDLSRFHADPDLKQ--VFCPL 236
Query: 67 DRSNVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLA 126
R NVM + +I+ +N+PDL ALNL++N + E+ + K +P +KILYL N I LA
Sbjct: 237 FRQNVMGAAIDIMCDNIPDLEALNLNDNSISSMEAFKGVEKRLPNLKILYLGDNKIPSLA 296
Query: 127 TIRTLESLSNLEELRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLDDIQLPPPIVFDLED 186
+ L +LS LE L L+ NP + + + SEVR+ FPKL+KLD L P I FDL +
Sbjct: 297 HLVVLRNLSILE-LVLKNNPCRSRYKDSQQFISEVRRKFPKLVKLDGETLEPQITFDLSE 355
Query: 187 NIELPKPQGSFLCHPEARDILRAFLEQYFALFDTESRAGLIDAYHENAQYSLVVTQGLGN 246
L + + S+LC +++R FL+QYF +FD+ +R L+DAYHE A S+ +
Sbjct: 356 QGRLLETKASYLCDVAGAEVVRQFLDQYFRIFDSGNRQALLDAYHEKAMLSISMPSA-SQ 414
Query: 247 NHLLNNMLANSRNLLRIEEPQRQKSL-LSVGKADILRALRFLPATKHDLLSFTCDCPLYT 305
LN+ +RNL R+ + ++ L G+ + L P T+HD +FT D +Y
Sbjct: 415 AGRLNSFWKFNRNLRRLLNGEENRTRNLKYGRLACVSTLDEWPKTQHDRRTFTVDLTIYN 474
Query: 306 PGLIQFSVCGLYEEITTGTKNKSKL----IRAFNRAFLLVPRSGGGFAITNDQLFITSAT 361
++ F+V GL++E+ T N + + +R F R +++VP++ GF I N+ +FIT+AT
Sbjct: 475 TSMMVFTVTGLFKELNDETNNPASMELYDVRHFARTYVVVPQN-NGFCIRNETIFITNAT 533
Query: 362 PEQ--------------AEKAFSSQVTASES----------------------------- 378
EQ A + SS VT+ ++
Sbjct: 534 HEQVREFKRSQHQPAPGAMPSTSSAVTSPQAGAAAGLQGRLNALGVATGPVAILSGDPLA 593
Query: 379 --------------TCSTPVSNEILIKQNMVKALSQVSGMNLNFSEKCLNEVQWDYDQAV 424
T P + + K M++A+S S MN+ +S KCL E WD++ A
Sbjct: 594 ATAPVNSGSAAISTTAVAPGAQDESTKMQMIEAMSAQSQMNVIWSRKCLEETNWDFNHAA 653
Query: 425 TIFNQLKAKNALPSEAFI 442
+F +L +N +P EAF+
Sbjct: 654 FVFEKLFKENKIPPEAFM 671
>sp|Q9GZY0|NXF2_HUMAN Nuclear RNA export factor 2 OS=Homo sapiens GN=NXF2 PE=1 SV=1
Length = 626
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 245/441 (55%), Gaps = 13/441 (2%)
Query: 7 NHTLIVLVSSATPYVELNNEIK----DKIKLVMAKRYNGDNKALDLSKFYADPDFVEANM 62
N + + V+ +T + N++K + +KL M KRYN +ALDL DPD + ++
Sbjct: 189 NQKICIFVNHSTAPYSVKNKLKPGQMEMLKLTMNKRYNVSQQALDLQNLRFDPDLMGRDI 248
Query: 63 FVPLDRSNVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNI 122
+ L+R N M + II N P+L +LNL NKLY + L + + P+VK L L+ N +
Sbjct: 249 DIILNRRNCMAATLKIIERNFPELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKL 308
Query: 123 KDLATIRTLESLSNLEELRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLDDIQLPPPIVF 182
+ + ++ L LEEL LE NP F++Q AY S +R FPKLL+LD +L P++
Sbjct: 309 ESAWELGKVKGL-KLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDGRELSAPVIV 367
Query: 183 DLEDNIELPKPQGSFLCHPEARDILRAFLEQYFALFDTESRAGLIDAYHENAQYSLVVTQ 242
D++ + + + +F + ++ FL+QY++++D+ R GL+ AYH+ A +SL +
Sbjct: 368 DIDSSETMKPCKENFTGSETLKHLVLQFLQQYYSIYDSGDRQGLLGAYHDEACFSLAIPF 427
Query: 243 GLGNN--HLLNNMLANSRNLLRIEEPQRQKSLLSVGKADILRALRFLPATKHDLLSFTCD 300
++ L +SRN+ +++P + LL K DI+ +L LP T+HDL S D
Sbjct: 428 DPKDSAPSSLCKYFEDSRNMKTLKDPYLKGELLRRTKRDIVDSLSALPKTQHDLSSILVD 487
Query: 301 CPLYTPGLIQFSVCGLYEEITTGTKNKSKLIRAFNRAFLLVPRSGGGFAITNDQLFITSA 360
T ++ FSV G+++E+ ++ + AF R F+ P S I ND+LF+ A
Sbjct: 488 VWCQTERMLCFSVNGVFKEVEGQSQGS---VLAFTRTFIATPGSSSSLCIVNDELFVRDA 544
Query: 361 TPEQAEKAFSSQVTASESTCSTPVSNEILIKQNMVKALSQVSGMNLNFSEKCLNEVQWDY 420
+P++ + AFS V+ S+ +S E +Q MV+A S SGM L +S+KCL + +W+Y
Sbjct: 545 SPQETQSAFSIPVSTLSSSSEPSLSQE---QQEMVQAFSAQSGMKLEWSQKCLQDNEWNY 601
Query: 421 DQAVTIFNQLKAKNALPSEAF 441
+A F L+ + +P+EAF
Sbjct: 602 TRAGQAFTMLQTEGKIPAEAF 622
>sp|Q9XVS7|NXF1_CAEEL Nuclear RNA export factor 1 OS=Caenorhabditis elegans GN=nxf-1 PE=1
SV=1
Length = 628
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 144/461 (31%), Positives = 240/461 (52%), Gaps = 49/461 (10%)
Query: 18 TPYVELNNEIKDKIKLVMAKRYNGDNKALDLSKFYADPDFVEANMFVPLDRSNVMTSVCN 77
P+++L E + I V+ KR+N +N+ LDLS F+ D +F +M + L + NVM +V +
Sbjct: 178 APWMKLKREEIEIIHRVVDKRHNAENRVLDLSNFHEDEEFKAKDMMMNLTKGNVMLTVLD 237
Query: 78 IINENLPDLFALNLSENK---LYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESL 134
I++ ++ AL+LS N+ L Y +L+S+AK + L L+HN+I +T + LE
Sbjct: 238 HIDDKYGNIVALSLSNNRIRHLDYASALVSIAKFVME---LDLSHNHI---STEKELEKF 291
Query: 135 SNL--EELRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLDDIQLPPPIVF-DLEDNIELP 191
+ L E E NP E F ++ AY S + + FP+ LD +++ P +V DL+ + +P
Sbjct: 292 AGLPVERFFFEGNPVVESFTQRAAYISYIHQSFPRCNMLDGVEVQPLVVGPDLDIHDAMP 351
Query: 192 KPQGSFLCHPEARDILRAFLEQYFALFDT----ESRAGLIDAYHENAQ-YSLVVTQGLGN 246
G + +P+ R ++ F+ YF +D +R L +AY +A +SL + G+
Sbjct: 352 FRAG-YYPNPQIRVLVEQFVTSYFDFYDGPDGQRTRRNLHNAYDADASTFSLTIEHLRGS 410
Query: 247 NHLLNN-------MLANSRNLLRIEEPQRQKSLLSV-GKADILRALRFLPATKHDLLSFT 298
+H ++ S N+L+ E R ++ S G DI AL LP + H +F
Sbjct: 411 SHARHHNDECFAQYAGVSHNVLKQERFARHRASRSARGAMDIAVALSKLPTSSHMRDTFI 470
Query: 299 CDCPLYTPGLIQFSVCGLYEEITTGTKNKSKLIRAFNRAFLLVPRSGGGFAITNDQLFIT 358
D L + L+ F+V GL+ G ++ F+R+FL+ PR A+ +DQLFIT
Sbjct: 471 VDVFLQSNDLLGFTVQGLF---CDGDLTQTPSPSFFSRSFLVSPRENDSVAVISDQLFIT 527
Query: 359 SATPEQAEK------------AFSSQVTASE------STCSTPVSNEILIKQNMVKALSQ 400
A+ ++ EK A QV+A + + + + I++ M+KA+ Q
Sbjct: 528 VASLDRLEKFKKLYDQSIANGAAVEQVSAVQIAQIGVNGMGFDGAPALPIREEMIKAMCQ 587
Query: 401 VSGMNLNFSEKCLNEVQWDYDQAVTIFNQLKAKNALPSEAF 441
SGM FSEKCL + W++D A FN++K+ ++P+EAF
Sbjct: 588 FSGMIPPFSEKCLADCAWNFDFACQKFNEIKS--SVPAEAF 626
>sp|Q9Y8G3|MEX67_SCHPO mRNA export factor mex67 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mex67 PE=1 SV=1
Length = 596
Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 212/456 (46%), Gaps = 53/456 (11%)
Query: 25 NEIKDKIKLVMAKRYNGDNKALDLSKFYADPDFVEANMFVPLD-RSNVMTSVCNIINENL 83
NE +K++ + RY K LDL DP + + +S + ++ + + N
Sbjct: 154 NETIEKLRQFLQTRYQPATKFLDLGNLQQDPLLKQMGILAEASTKSKMFPALMKVASLNF 213
Query: 84 PDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLE---SLSNLEEL 140
PD+ +++LS+N L ++ +LA+ P++ L LA+N I L+ + L L+EL
Sbjct: 214 PDVISVSLSDNNLQSVTAVTTLAQTWPKLLNLSLANNRITSLSDLDPWSPKTKLPELQEL 273
Query: 141 RLEKNPWTECF-NEQDAYTSEVRKIFPKLLKLDDIQLPPPIVFDLEDNIELPKPQGSFLC 199
L NP F N Y E+ FPKL LD + I+ + + P Q SF
Sbjct: 274 VLVGNPIVTTFANRAMDYQREMVSRFPKLRLLDGNSINSEIIAS-QSTVPFPVYQ-SFFD 331
Query: 200 HPEARDILRAFLEQYFALFDTESRAGLIDA-YHENAQYSLVV--------------TQGL 244
E I+ +FL +F +D E+R+ L++ Y NA +S+ + T+
Sbjct: 332 KVETEQIVNSFLAAFFKGWD-ENRSALVNQLYSPNATFSISLNASNVRTNFSQKTDTKKW 390
Query: 245 GNNHLLNNMLANSRNLLRIEEPQRQKSLLSVGKADILRALRFLPATKHDLLSFTC----D 300
G + SRNLL + + KS L G +I A++ LPAT HDL +
Sbjct: 391 GAYKM------KSRNLLYSQSQKESKSRLFNGHEEISNAVKSLPATAHDLSDRSQWVFDG 444
Query: 301 CPLYTPGL---IQFSVCGLYEEITTGTKNKSKLIRAFNRAFLLVPRSGGGFAITNDQLFI 357
L P + I+ V G +EE +NK +L+R+F+R L++P G I ND L I
Sbjct: 445 WNLVLPSVGAAIKIVVHGQFEE----PQNK-RLLRSFDRTLLILPGGSTGILIINDLLVI 499
Query: 358 TSAT------PEQAE-KAFSSQVTASESTCS-----TPVSNEILIKQNMVKALSQVSGMN 405
S P Q+ + ++ ++AS S S P + +Q +V + +G+N
Sbjct: 500 RSFAGSLGWLPGQSSVRTSNNAMSASASKPSDIVQPRPEQAMLDTRQQIVLKIKAETGLN 559
Query: 406 LNFSEKCLNEVQWDYDQAVTIFNQLKAKNALPSEAF 441
++ C + WDY+ A+ F +LK++N +P+EAF
Sbjct: 560 DYYAHMCCEQNNWDYNSALASFLELKSRNVIPAEAF 595
>sp|Q9H1B4|NXF5_HUMAN Nuclear RNA export factor 5 OS=Homo sapiens GN=NXF5 PE=2 SV=1
Length = 397
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 140/299 (46%), Gaps = 40/299 (13%)
Query: 7 NHTLIVLVSSATPYVELNNEIK----DKIKLVMAKRYNGDNKALDLSKFYADPDFVEANM 62
N + + VS T + N++K + +KL M KRYN +ALDL DPD + ++
Sbjct: 78 NQKICIFVSHFTAPYSVKNKLKPGQMEMLKLTMNKRYNVSQQALDLQNLRFDPDLMGRDI 137
Query: 63 FVPLDRSNVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNI 122
+ L+R N M + I N P+L +LNL NKLY + L + + P+VK L L+ N +
Sbjct: 138 DIILNRRNCMAATLKITERNFPELLSLNLCNNKLYQLDGLSDITEKAPKVKTLNLSKNKL 197
Query: 123 KDLATIRTLESLSNLEELRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLDDIQLPPPIVF 182
+ + ++ L LEEL LE NP F++Q AY S +R FPKLL+LD +L P++
Sbjct: 198 ESAWELGKVKGL-KLEELWLEGNPLCSTFSDQSAYVSAIRDCFPKLLRLDGRELSAPVIV 256
Query: 183 DLEDNIELPKPQGSFLCHPEARDILRAFLEQYFALFDTESRAGLIDAYHENAQYSLVVTQ 242
D++ + + + +F + ++ FL+Q
Sbjct: 257 DIDSSETMKPCKENFTGSETLKHLVLQFLQQ----------------------------- 287
Query: 243 GLGNNHLLNNMLANSRNLLRIEEPQRQKSLLSVGKADI-LRALRFLPATKHDLLSFTCD 300
L +SRN+ +++P Q+ LL K + +L LP T+HD S D
Sbjct: 288 -----SNLCKYFKDSRNIKILKDPYLQRKLLKHTKCPRNVDSLSALPETQHDFTSILVD 341
>sp|Q9H4D5|NXF3_HUMAN Nuclear RNA export factor 3 OS=Homo sapiens GN=NXF3 PE=1 SV=1
Length = 531
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 166/366 (45%), Gaps = 50/366 (13%)
Query: 20 YVELNNEIKDKIKLVMAKRYNGDNKALDLSKFYADPDFVEANMFVPLDRSNVMTSVCNII 79
+ EL +E ++IKL M ++ + +ALD+ + PD V + + + M + ++
Sbjct: 195 HRELKSEKVEQIKLAMNQQCDVSQEALDIQRLPFYPDMVNRDTKMASNPRKCMAASLDVH 254
Query: 80 NENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEE 139
EN+P + ++ + I E +
Sbjct: 255 EENIPTV------------------------------MSAGEMDKWKGIEPGEKCA---- 280
Query: 140 LRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLDDIQLPPPIVFDLEDNIELPKPQGSFLC 199
+++P F++ + + + ++FPKLL LD Q P + E + LP +GSF
Sbjct: 281 ---DRSPVCTTFSDTSSNINSILELFPKLLCLDGQQSPRATLCGTEAHKRLPTCKGSFFG 337
Query: 200 HPEARDILRAFLEQYFALFDTESRAGLIDAYHENAQYSLVVTQGLGNN--HLLNNMLANS 257
++++ FL+QY+ ++D+ R GL+ AYH+ A +SL + ++ +S
Sbjct: 338 SEMLKNLVLQFLQQYYLIYDSGDRQGLLSAYHDEACFSLSIPFNPEDSAPSSFCKFFKDS 397
Query: 258 RNLLRIEEPQRQKSLLSVGKADILRALRFLPATKHDLLSFTCDCPLYTPGLIQFSVCGLY 317
RN+ +++P + LL K DI+ +L LP T+HDL SF D T ++ FSV G++
Sbjct: 398 RNIKILKDPYLRGELLKHTKLDIVDSLSALPKTQHDLSSFLVDMWYQTEWMLCFSVNGVF 457
Query: 318 EEITTGTKNKSKLIRAFNRAFLLVPRSGGGFAITNDQLFITSATPEQAEK--------AF 369
+E+ ++ + AF R F+ P S I ND+LF+ + + + AF
Sbjct: 458 KEVEGQSQGS---VLAFTRTFIATPGSSSSLCIVNDKLFVRDTSHQGTQSALFTLVPTAF 514
Query: 370 SSQVTA 375
SS V A
Sbjct: 515 SSSVPA 520
>sp|Q9XVS8|NXF2_CAEEL Nuclear RNA export factor 2 OS=Caenorhabditis elegans GN=nxf-2 PE=1
SV=1
Length = 421
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 169/360 (46%), Gaps = 33/360 (9%)
Query: 39 YNGDNKALDLSKFYADPDFVEANMFVPLDRSNVMTSVCNIINENLPDLFALNLSENKLYY 98
Y + L+LS F + +FVE +M + L ++ VM+ V I P + ++ S N+L +
Sbjct: 51 YVATDDVLNLSNFSKNTEFVERDMLMCLTKTRVMSVVLQHIGYKYPRISGISFSNNRLCH 110
Query: 99 PESLISLAKVIPRVKILYLAHNNIKD----LATIRTLESLSNLEELR-----------LE 143
+ L SL+ + +K L L+HN + L I +S+ EEL+ E
Sbjct: 111 LDHLSSLSSISKFLKFLDLSHNQVLKVFVFLNFITFFSKISSGEELKKLGTIPVETVFFE 170
Query: 144 KNPWTECFNEQDAYTSEVRKIFPKLLKLDDIQLPPPIVFDLEDNIELPKPQGSFLCHPEA 203
NP E F + Y + ++K FPK LD +++ P + + I +P G + E
Sbjct: 171 GNPVCEKFVQCAEYANFIQKTFPKCSNLDGMEVEPKPDHNRIEQI-IPFRNG-YYGSDEV 228
Query: 204 RDILRAFLEQYFALFDT----ESRAGLIDAYH-ENAQYSLVVT--------QGLGNNHLL 250
R ++ F+ Y+ ++D ++R L+DAY N+ ++ V ++
Sbjct: 229 RTLVEEFIITYYKIYDGADGQQTRKQLLDAYDTNNSTFTHTVVCLWDPIKFVMYPDSESY 288
Query: 251 NNMLANSRNLLRIEE-PQRQKSLLSVGKADILRALRFLPATKHDLLSFTCDCPLYTPGLI 309
L S N+L E + S +S G DI+ AL LPAT H + +F D L + L+
Sbjct: 289 RMYLRTSHNVLNQEYFAANRASRISHGAMDIVVALSRLPATIHLMDTFVVDVFLVSATLL 348
Query: 310 QFSVCGLYEEITTGTK--NKSKLIRAFNRAFLLVPRSGGGFAITNDQLFITSATPEQAEK 367
F++ G + + + K N + F R F++ PR G AI +DQLFI+S + + ++
Sbjct: 349 GFTLHGTFRDGPSAIKPENTEEHDNYFTRTFMVAPRGEGKVAIVSDQLFISSMSKRRGDQ 408
>sp|P84149|MEX67_CANAL mRNA export factor MEX67 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=MEX67 PE=1 SV=2
Length = 617
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 207/492 (42%), Gaps = 81/492 (16%)
Query: 29 DKIKLVMAKRYNGDNKALDLSKFYADPDFVEANMFVPLD-RSNVMTSVCNIINENLPDLF 87
+ I + RY + K L+LS DP F L S ++ + ++ D+
Sbjct: 128 ETISQFLKARYQPEIKMLNLSNVKQDPTLTAQGFFGSLSVSSKFFPALMKVASDLKLDVD 187
Query: 88 ALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTL-ESLSNLEELRLEKNP 146
+++LS N+L ++L S+A+ P+++ L L +NN + T L+ L EL L NP
Sbjct: 188 SIDLSNNELQDLQTLTSMAQTFPKLQNLSLQNNNFTKIKVFETWRHKLNFLRELILFNNP 247
Query: 147 WTECFNEQDAYTS--EVRKIFPKLLKLDDIQLPPPIVFDLEDNIELPKPQGSFLCHPEAR 204
+ + + T E+ K FP+L+ L L V + P+ F ++R
Sbjct: 248 IVQTNDPAEIQTIKLELMKSFPRLVVLSGEILRNEQVLIANLSFPFESPETMFFQDEDSR 307
Query: 205 DILRAFLEQYFALFDTESRAGLIDAYHENAQYSLVV-----------TQGLGNNHLLNNM 253
++ F+ Y L+D +R+ L+ Y +Q+S+ V G +
Sbjct: 308 NLATNFIANYLKLWDA-NRSELMILYQNESQFSMQVDSSHPHLIESGNSGYSGSTDFGYY 366
Query: 254 LANSRNLLRIEEPQRQKSLLSVGKADILRALRFLPATKHDLLS----FTCDCPLY-TPGL 308
L NSRNL R+ + + + LS+G+ I ++ + LP T+HD+++ F+ + + T
Sbjct: 367 LNNSRNLTRVSSIKARMAKLSIGQEQIYKSFQQLPKTRHDIIATPELFSMEVYKFPTLNG 426
Query: 309 IQFSVCGLYEEIT------------TGTKNKSKL------------IRAFNRAFLLVPRS 344
I ++ G ++E+ +G + S+ ++F+R F+++P
Sbjct: 427 IMITLHGSFDEVAQPEVDGSASSAPSGPRGGSRYHSGPKHKRIPLSKKSFDRTFVVIPGP 486
Query: 345 GGGFAITNDQLFI---TSATPEQAEKAFSSQVTASESTC--------------------- 380
G + +D L I TS P + +K S+ A+
Sbjct: 487 NGSMIVASDTLLIRPYTSDFPWKVQKLPSNPTAATPGVSATSTPSPLPPTTITTPQLAPP 546
Query: 381 -STPVSNEI---------LIKQNMVKALSQVSGMNLNFSEKCLNEVQWDYDQAVTIFNQL 430
+ P + ++ I+Q ++ + + +N+N+ + WDY QA F
Sbjct: 547 GTGPTTADLPADIKARLNQIQQELLVKILLETKLNINYGIMLCEQSNWDYQQASVNFKNS 606
Query: 431 KAKNALPSEAFI 442
A +LPS+AF+
Sbjct: 607 AA--SLPSDAFV 616
>sp|Q9VV73|NXF2_DROME Nuclear RNA export factor 2 OS=Drosophila melanogaster GN=nxf2 PE=2
SV=1
Length = 841
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 191/440 (43%), Gaps = 50/440 (11%)
Query: 31 IKLVMAKRYNGDNKALDLSKFYADPDFVEANMFVPLDRSNVMTSVCNIINENLPDLFALN 90
I+ +++ Y N+ L+L +F++ ++ V L ++T V ++ + F
Sbjct: 422 IQKAVSQCYVAQNRMLNLERFHSRECL--KDVMVSLSSPKILTYVLSVASRK----FMTT 475
Query: 91 LSENKLYYPESLI----SLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELRLEKNP 146
SE +L + + L+ + ++ ++ + L+HN ++DL++I +L +L L+ L L N
Sbjct: 476 CSEIRLCHNKVLVLDGAHVLGMMGCLRAVDLSHNWVQDLSSIHSLGNLP-LKSLVLHGNK 534
Query: 147 WTECFNEQDAYTSEVRKIFPKLLKLDDIQLPPPIVFDLEDNIELPKP--QGSFLCHPEAR 204
+ Y V+++FP+L LD + DL+ N P Q +FLC A
Sbjct: 535 LCRNYRLPSEYVRAVKEVFPQLTTLDGV--------DLQTN---PGQSLQKNFLCDTGAY 583
Query: 205 DILRAFLEQYFALFDT-ESRAGLIDAYHENAQYSLVVTQGLGNNHLLNNMLA-------N 256
+++ AFLE Y F+ E R L Y EN+ ++L + NH +L +
Sbjct: 584 ELVGAFLENYLREFENDEFRHNLYKYYSENSIFTLTCNYNVVQNHQTPKILQRLSKYNRH 643
Query: 257 SRNLLRIEEPQRQKSLLSVGKADILRALRFLPATKHDLLSFTCDCPLYTPGLIQFSVCGL 316
+RNL R ++ + + G I+ L LP HD S D Y V GL
Sbjct: 644 ARNL-RNKDYSKASDGVFFGCTYIVEILLQLPRVTHDFHSLQTDVMHYNGKGAVIYVAGL 702
Query: 317 YEEITTGTKN---------------KSKLIRAFNRAFLLVPRSGGGFAITNDQLFITSAT 361
+ T+N + + F+ A L + + I N++L IT+ +
Sbjct: 703 LRDEPPSTRNGHGSKTDIGGVLLGFSRQFVVTFDEANLGLGKRARRLKIANERLHITNPS 762
Query: 362 PEQAEKAFSSQVTASESTCSTPVSNEILIKQNMVKALSQVSGMNLNFSEKCLNEVQWDYD 421
AFS V + + + + +K + + +V+G+ + + E WD++
Sbjct: 763 KTAIRNAFS--VNFPDPSERQAEEDSLDVKDHKLLLFQEVTGLISTWVTSIVEEADWDFE 820
Query: 422 QAVTIFNQLKAKNALPSEAF 441
+A+ +F Q A + +P AF
Sbjct: 821 RALKLFIQKNADHEIPDLAF 840
>sp|Q99257|MEX67_YEAST mRNA export factor MEX67 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MEX67 PE=1 SV=1
Length = 599
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 184/427 (43%), Gaps = 77/427 (18%)
Query: 31 IKLVMAKRYNGDNKALDLSKFYADPDFVEANMFVPLDRSNVMTSVCNIINENLPDLF--A 88
++ V+ KRY+ K L+L ++DP+ ++ +F + + M + L +
Sbjct: 107 LRGVLLKRYDPQTKLLNLGALHSDPELIQKGVFSSISTQSKMFPAMMKLASTEKSLIVES 166
Query: 89 LNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSN----LEELRLEK 144
+NL++N+L ++ +LA+ P +K L LA+N I R+LE N L EL +
Sbjct: 167 VNLADNQLKDISAISTLAQTFPNLKNLCLANNQI---FRFRSLEVWKNKFKDLRELLMTN 223
Query: 145 NPWTECFNEQDAYTSEVRKIFPKLLKLDDIQLPPPIVFD---LEDNIELP-KPQGSFLCH 200
NP T Y +E+ ++FPKL+ LD++ IV D L+ LP K Q F +
Sbjct: 224 NPITT----DKLYRTEMLRLFPKLVVLDNV-----IVRDEQKLQTVYSLPMKIQQFFFEN 274
Query: 201 PEARDILRAFLEQYFALFDTESRAGLIDAYHENAQYSLVVTQGLGNNHLLNN-------- 252
F + L+D +R L++ Y +Q+S+ V + + + ++
Sbjct: 275 DALGQSSTDFATNFLNLWDN-NREQLLNLYSPQSQFSVSVDSTIPPSTVTDSDQTPAFGY 333
Query: 253 MLANSRNLLRIEEPQRQKSLLSVGKADILRALRFLPATKHDLLSFTCDCPLYT---PGLI 309
+++SRN+ ++ + + LS+G+ I + LP TKH L + + T P +
Sbjct: 334 YMSSSRNISKVSSEKSIQQRLSIGQESINSIFKTLPKTKHHLQEQPNEYSMETISYPQIN 393
Query: 310 QFSVC--GLYEEI---------TTGTKNKSKLIR----------------AFNRAFLLVP 342
F + G +EE TG N K R +F+R +++VP
Sbjct: 394 GFVITLHGFFEETGKPELESNKKTGKNNYQKNRRYNHGYNSTSNNKLSKKSFDRTWVIVP 453
Query: 343 RSGGGFAITNDQLFITSATPEQAEKAFSSQVTASESTCSTPVSNEILIKQNMVKALSQVS 402
+ I +D L + +A+S T + T S ++ Q L QV+
Sbjct: 454 MN-NSVIIASDLLTV---------RAYS---TGAWKTASIAIAQP---PQQQASVLPQVA 497
Query: 403 GMNLNFS 409
MN N +
Sbjct: 498 SMNPNIT 504
>sp|Q4LDG9|DNAL1_HUMAN Dynein light chain 1, axonemal OS=Homo sapiens GN=DNAL1 PE=1 SV=1
Length = 190
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 108 VIPRVKILYLAHNNIKDLATIRTLESLSNLEELRLEKNPWTECFNEQDAYTSEVRKIFPK 167
++ ++KILY+++N +KD A L L LE+L NP E + ++ + E K PK
Sbjct: 113 IMKKLKILYMSNNLVKDWAEFVKLAELPCLEDLVFVGNPLEEKHSAENNWIEEATKRVPK 172
Query: 168 LLKLDDIQLPPPIVFDLEDN 187
L KLD P I D E++
Sbjct: 173 LKKLDGT---PVIKGDEEED 189
>sp|Q2KID4|DNAL1_BOVIN Dynein light chain 1, axonemal OS=Bos taurus GN=DNAL1 PE=2 SV=1
Length = 190
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 108 VIPRVKILYLAHNNIKDLATIRTLESLSNLEELRLEKNPWTECFNEQDAYTSEVRKIFPK 167
V+ ++KILY+++N +KD A L L LE+L NP E + + + E K PK
Sbjct: 113 VMKKLKILYMSNNLVKDWAEFVKLAELPCLEDLVFVGNPLEEKHSAEGNWVEEATKRVPK 172
Query: 168 LLKLDDIQLPPPIVFDLEDN 187
L KLD P I D E++
Sbjct: 173 LKKLDGT---PVIKEDEEED 189
>sp|Q05A62|DNAL1_MOUSE Dynein light chain 1, axonemal OS=Mus musculus GN=Dnal1 PE=2 SV=2
Length = 190
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 108 VIPRVKILYLAHNNIKDLATIRTLESLSNLEELRLEKNPWTECFNEQDAYTSEVRKIFPK 167
V+ ++KILY+++N +KD A L L LE+L NP E + + + E K PK
Sbjct: 113 VMKKLKILYMSNNLVKDWAEFLKLAELPCLEDLVFVGNPLEEKHSAEGNWIDEATKRVPK 172
Query: 168 LLKLD 172
L KLD
Sbjct: 173 LKKLD 177
>sp|Q28G94|DNAL1_XENTR Dynein light chain 1, axonemal OS=Xenopus tropicalis GN=dnal1 PE=2
SV=1
Length = 192
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 82 NLPDLFALNLSENKLYYPESLISLAK---VIPRVKILYLAHNNIKDLATIRTLESLSNLE 138
NL L A+ + +L+ +LI K V+ ++K+LY+++N +KD A L L LE
Sbjct: 84 NLNGLEAVGETLEELWISYNLIEKLKGIHVMKKLKVLYMSNNLVKDWAEFSKLGELPLLE 143
Query: 139 ELRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLD 172
++ NP E + + E K PKL KLD
Sbjct: 144 DMVFVGNPLEERHTAEGNWLEEAVKRLPKLKKLD 177
>sp|Q7PK92|DAAF1_ANOGA Dynein assembly factor 1, axonemal homolog OS=Anopheles gambiae
GN=AGAP009594 PE=3 SV=2
Length = 910
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 70 NVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIR 129
N + + N ++ LP L LN+S N L ESL L K V +L ++HN I+D+A ++
Sbjct: 96 NHIAKIENCGSDILPVLNTLNISHNYLKSIESLAELRKC-DFVSVLDISHNRIEDIAIVK 154
Query: 130 TLESLSNLEELRLEKNP 146
L + L L L NP
Sbjct: 155 VLADMKGLRVLTLVGNP 171
>sp|Q9XHH2|DNAL1_CHLRE Dynein light chain 1, axonemal OS=Chlamydomonas reinhardtii GN=LC1
PE=1 SV=1
Length = 198
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 81 ENLPDLFALNLSENKLYYPE--SLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLE 138
ENL D A L E + Y + SL + K++ +++LY+++N I + I L +L LE
Sbjct: 86 ENL-DAVADTLEELWISYNQIASLSGIEKLV-NLRVLYMSNNKITNWGEIDKLAALDKLE 143
Query: 139 ELRLEKNPWTECFNEQDA---YTSEVRKIFPKLLKLDDI 174
+L L NP + E +A Y EV K P L KLD +
Sbjct: 144 DLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLDGM 182
>sp|O35381|AN32A_MOUSE Acidic leucine-rich nuclear phosphoprotein 32 family member A
OS=Mus musculus GN=Anp32a PE=1 SV=1
Length = 247
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 91 LSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELRLEKNPWTEC 150
LSEN++ L LA+ P +K L L+ N IKDL+TI L+ L NL+ L L T
Sbjct: 71 LSENRI--SGDLEVLAEKCPNLKHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNL 128
Query: 151 FNEQDAYTSEVRKIFPKLLKLD 172
+AY V K+ P+++ LD
Sbjct: 129 ----NAYRENVFKLLPQVMYLD 146
>sp|P49911|AN32A_RAT Acidic leucine-rich nuclear phosphoprotein 32 family member A
OS=Rattus norvegicus GN=Anp32a PE=2 SV=1
Length = 247
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 91 LSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELRLEKNPWTEC 150
LSEN++ L LA+ P +K L L+ N IKDL+TI L+ L NL+ L L T
Sbjct: 71 LSENRI--SGDLEVLAEKCPNLKHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNL 128
Query: 151 FNEQDAYTSEVRKIFPKLLKLD 172
+AY V K+ P+++ LD
Sbjct: 129 ----NAYRENVFKLLPQVMYLD 146
>sp|Q8CIV8|TBCE_MOUSE Tubulin-specific chaperone E OS=Mus musculus GN=Tbce PE=1 SV=1
Length = 524
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%)
Query: 78 IINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNL 137
+I E L DL AL+LSENKL +P +L + +K L L I + S L
Sbjct: 173 LIAEQLKDLEALDLSENKLQFPSDSPTLTRTFSTLKTLVLNKTGITWTEVLHCAPSWPVL 232
Query: 138 EELRLEKN 145
EEL L+ N
Sbjct: 233 EELYLKSN 240
>sp|Q641R9|DNAL1_XENLA Dynein light chain 1, axonemal OS=Xenopus laevis GN=dnal1 PE=2 SV=1
Length = 192
Score = 39.7 bits (91), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 81 ENLPDLFALNLSENKLYYPESLISLAK---VIPRVKILYLAHNNIKDLATIRTLESLSNL 137
+NL L A+ + +L+ +LI K V+ ++K+LY+++N +KD A L L L
Sbjct: 83 KNLNGLEAVGETLEELWISYNLIEKLKGIHVMKKLKVLYMSNNLVKDWAEFSKLGELPLL 142
Query: 138 EELRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLD 172
++ NP E + + E K PKL KLD
Sbjct: 143 GDIVFVGNPLEEKHTAEGNWMEEAVKRLPKLKKLD 177
>sp|Q6DHB1|DNAL1_DANRE Dynein light chain 1, axonemal OS=Danio rerio GN=dnal1 PE=2 SV=1
Length = 192
Score = 39.3 bits (90), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 81 ENLPDLFALNLSENKLYYPESLISLAK---VIPRVKILYLAHNNIKDLATIRTLESLSNL 137
+NL L A+ + +L+ +LI K V+ ++K+LY+++N +K+ L L +L
Sbjct: 83 KNLNGLEAVGDTLEELWISYNLIEKLKGIHVMKKLKVLYMSNNLVKEWGEFLKLADLPSL 142
Query: 138 EELRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLD 172
+L NP E ++ + E K PKL KLD
Sbjct: 143 VDLVFVGNPLEEKYSADGNWIEEATKRLPKLKKLD 177
>sp|Q5FVQ9|TBCE_RAT Tubulin-specific chaperone E OS=Rattus norvegicus GN=Tbce PE=2 SV=1
Length = 524
Score = 38.9 bits (89), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 78 IINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNL 137
+I E L DL AL+LSENKL +P +L + +K L L I + S L
Sbjct: 173 LIAEQLKDLEALDLSENKLQFPSDSPTLTRTFSTLKTLVLNKTGITWTEVLHCAPSWPVL 232
Query: 138 EELRLEKN 145
+EL L+ N
Sbjct: 233 QELYLKSN 240
>sp|Q504C1|LRIT2_DANRE Leucine-rich repeat, immunoglobulin-like domain and transmembrane
domain-containing protein 2 OS=Danio rerio GN=lrit2 PE=2
SV=2
Length = 561
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 72 MTSVCNIINENLP-DLFALNLSENKLY-YPESLISLAKVIPRVKILYLAHNNIKDLATIR 129
M + I + LP DL + + +++L PE++ S K + K L+L N+I + I+
Sbjct: 41 METALTGIPDGLPEDLTKIRIEKSQLSELPEAVFSHVKAL---KHLWLNFNDIA-IINIK 96
Query: 130 TLESLSNLEELRLEKN-----PWTEC------------FNEQDAYTSEVRKIFPKLLKLD 172
+LE L+NL ELRL+ N PWT N DA K P L LD
Sbjct: 97 SLEGLANLTELRLQGNKLRSVPWTAFEETPNLKILDLKHNRIDALPEHALKFLPGLTYLD 156
>sp|Q96FV0|LRC46_HUMAN Leucine-rich repeat-containing protein 46 OS=Homo sapiens GN=LRRC46
PE=2 SV=1
Length = 321
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 24/125 (19%)
Query: 64 VPLDRSNVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIK 123
V LDR + T++ N+ E L +L +L L NK+ E+L IP ++ L LA N I+
Sbjct: 49 VRLDREGI-TTIRNL--EGLQNLHSLYLQGNKIQQIENLA----CIPSLRFLSLAGNQIR 101
Query: 124 ------DLATIRTLESLSNL-EELRLEKNPWT---------ECFNEQDAYTSEVRKIFPK 167
DL ++ L+ NL E L+L++ P + C N QD Y V + P
Sbjct: 102 QVENLLDLPCLQFLDLSENLIETLKLDEFPQSLLILNLSGNSCTN-QDGYRELVTEALPL 160
Query: 168 LLKLD 172
LL LD
Sbjct: 161 LLDLD 165
>sp|Q4R803|PPR42_MACFA Protein phosphatase 1 regulatory subunit 42 OS=Macaca fascicularis
GN=PPP1R42 PE=2 SV=1
Length = 357
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 89 LNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELRLEKNPWT 148
L L E L+ P +L SLAK + IL +++NNI D IR LE L NL +L
Sbjct: 128 LPLGEKLLFDPRTLHSLAK---SLSILNISNNNIDD---IRDLEILENLNQLI------- 174
Query: 149 ECFNEQDAYTSEVRKIFPKLLKLDDIQL---PPPIVFDLEDNIELPKPQGSFLCHPEARD 205
+ Q + ++ + KL+KL I L P + D + L FL E ++
Sbjct: 175 -AVDNQLLHVKDLEFLLNKLMKLWKIDLNGNPVCLKPKYRDRLILVSKSLEFLDGKEIKN 233
Query: 206 ILRAFLEQYFALFDTESRAGLIDAYHENAQYSLV 239
I R FL + A D + + + +E+A SL+
Sbjct: 234 IERQFLMNWKASKDAKKISKKRSSKNEDASNSLI 267
>sp|O43423|AN32C_HUMAN Acidic leucine-rich nuclear phosphoprotein 32 family member C
OS=Homo sapiens GN=ANP32C PE=2 SV=1
Length = 234
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 82 NLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELR 141
++ DL L L + +L L LA+ P + LYL+ N IKDL+TI L+ L NL+ L
Sbjct: 56 SISDLPKLKLRKLELRVSGGLEVLAEKCPNLTHLYLSGNKIKDLSTIEPLKQLENLKSLD 115
Query: 142 L 142
L
Sbjct: 116 L 116
>sp|Q16RY9|DAAF1_AEDAE Dynein assembly factor 1, axonemal homolog OS=Aedes aegypti
GN=AAEL010772 PE=3 SV=1
Length = 1107
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 70 NVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIR 129
N +T + N ++ LP L LNLS N L ++L L + V +L L+HN I+D+A ++
Sbjct: 110 NHITRIENCGHDILPVLNTLNLSHNYLKTADNLDHL-RHCNFVSVLDLSHNRIEDIAIVK 168
Query: 130 TLESLSNLEELRLEKNP 146
L + L L + NP
Sbjct: 169 ILGGMKELRVLTMTGNP 185
>sp|Q3V1M1|IGS10_MOUSE Immunoglobulin superfamily member 10 OS=Mus musculus GN=Igsf10 PE=2
SV=2
Length = 2594
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 19/126 (15%)
Query: 89 LNLSENKL--YYPESLISLAKV----IPRVKILYLAHNNIKDLATIRTLESLSNLEELRL 142
++L N+L +P++ +SL+ + +K LYL+ N + L + S+ NLE L L
Sbjct: 158 VHLEGNRLTKLHPDTFVSLSYLQIFKTSFIKYLYLSDNFLTSLPK-EMVSSMPNLESLYL 216
Query: 143 EKNPWT-ECFNEQDAYTSEVRKIFPKLLKLDDIQLP-PPIVFDLEDNIELPK-------P 193
NPWT +C + + SE + P ++K ++P P L N + K P
Sbjct: 217 HGNPWTCDCHLK---WLSEWMQGNPDIIKCKKERIPSSPQQCPLCMNPRISKGRSIAMVP 273
Query: 194 QGSFLC 199
GSFLC
Sbjct: 274 SGSFLC 279
>sp|Q7ZY40|AN32E_XENLA Acidic leucine-rich nuclear phosphoprotein 32 family member E
OS=Xenopus laevis GN=anp32e PE=1 SV=1
Length = 263
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 83 LPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELRL 142
LP L L LS+N + L L + P + L L+ N IKDL+T+ L SL NL+ L L
Sbjct: 63 LPKLRKLELSDNSI--SGGLDVLTERCPNITYLNLSGNKIKDLSTVEALASLKNLKSLDL 120
>sp|O62220|AN321_CAEEL Acidic leucine-rich nuclear phosphoprotein 32-related protein 1
OS=Caenorhabditis elegans GN=F33H2.3 PE=3 SV=1
Length = 229
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 83 LPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELRL 142
LP L L++S+N+L S L K P +K + LA N + L +R L+ L NL EL L
Sbjct: 62 LPALTYLDISDNQLGDNASFDVLVKNAPDLKKITLASNKLS-LDNLRCLKVLPNLFELDL 120
Query: 143 EKNPWTECFNEQDAYTSEVRKIFPKLLKLD 172
NP + Y ++ ++ P L LD
Sbjct: 121 SNNPSLGLLED---YREKMFEMIPSLKILD 147
>sp|Q15813|TBCE_HUMAN Tubulin-specific chaperone E OS=Homo sapiens GN=TBCE PE=1 SV=1
Length = 527
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 70 NVMTSVCNIIN--ENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLAT 127
N+++S +I+ + L L LN+SENKL +P + L + +K+L L I
Sbjct: 163 NLLSSWDEVIHIADQLRHLEVLNVSENKLKFPSGSV-LTGTLSVLKVLVLNQTGITWAEV 221
Query: 128 IRTLESLSNLEELRLEKN 145
+R + LEEL LE N
Sbjct: 222 LRCVAGCPGLEELYLESN 239
>sp|O43822|CU002_HUMAN Protein C21orf2 OS=Homo sapiens GN=C21orf2 PE=1 SV=1
Length = 256
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 79 INENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLE 138
I + +P L + LS N + S + R+ LYL N I LA + L+ L L
Sbjct: 35 ICQEMPSLEVITLSVNSI----STLEPVSRCQRLSELYLRRNRIPSLAELFYLKGLPRLR 90
Query: 139 ELRLEKNPWTECFNEQDAYTSEVRKIFPKLLKLDD 173
L L +NP C Y V + P+L KLD+
Sbjct: 91 VLWLAENPC--CGTSPHRYRMTVLRTLPRLQKLDN 123
>sp|Q9EST6|AN32B_RAT Acidic leucine-rich nuclear phosphoprotein 32 family member B
OS=Rattus norvegicus GN=Anp32b PE=2 SV=1
Length = 272
Score = 36.6 bits (83), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 91 LSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELRLEKNPWTEC 150
LSEN+++ L LA+ +P + L L+ NN+KD++T+ L+ L L+ L L E
Sbjct: 71 LSENRIFG--GLDRLAEELPSLTHLNLSGNNLKDISTLEPLKRLDCLKSLDL---FGCEV 125
Query: 151 FNEQDAYTSEVRKIFPKLLKLD 172
N D Y V ++ P+L LD
Sbjct: 126 TNRSD-YRETVFRLLPQLSYLD 146
>sp|Q9EST5|AN32B_MOUSE Acidic leucine-rich nuclear phosphoprotein 32 family member B
OS=Mus musculus GN=Anp32b PE=1 SV=1
Length = 272
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 91 LSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELRLEKNPWTEC 150
LSEN+++ L LA+ +P + L L+ NN+KD++T+ L+ L L+ L L E
Sbjct: 71 LSENRIFG--GLDRLAEELPSLTHLNLSGNNLKDISTLEPLKRLDCLKSLDL---FGCEV 125
Query: 151 FNEQDAYTSEVRKIFPKLLKLD 172
N D Y V ++ P+L LD
Sbjct: 126 TNRSD-YRETVFRLLPQLSYLD 146
>sp|Q4R747|LRC46_MACFA Leucine-rich repeat-containing protein 46 OS=Macaca fascicularis
GN=LRRC46 PE=2 SV=1
Length = 321
Score = 36.6 bits (83), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 24/125 (19%)
Query: 64 VPLDRSNVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIK 123
V LDR + T++ N+ E L +L +L L NK+ E+L +P ++ L LA N I+
Sbjct: 49 VRLDREGI-TTIRNL--EGLKNLHSLYLQGNKIQQIENLA----CVPSLRFLSLAGNQIR 101
Query: 124 ------DLATIRTLESLSNL-EELRLEKNPWT---------ECFNEQDAYTSEVRKIFPK 167
DL ++ L+ NL E L+L++ P + C N QD+Y V + P
Sbjct: 102 QVENLLDLPCLQFLDLSENLIETLKLDEFPQSLLILNLSGNSCTN-QDSYRELVIEALPL 160
Query: 168 LLKLD 172
LL LD
Sbjct: 161 LLDLD 165
>sp|Q6ZRR7|LRRC9_HUMAN Leucine-rich repeat-containing protein 9 OS=Homo sapiens GN=LRRC9
PE=2 SV=2
Length = 1453
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 86 LFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELRLEKN 145
L AL+L EN+L L SL K+ + L+L +N I+D+ + L+ +S L EL + N
Sbjct: 1274 LLALHLEENRLRELGKLQSLVKL----EKLFLGYNKIQDITELEKLDVISTLRELTVYGN 1329
Query: 146 P 146
P
Sbjct: 1330 P 1330
>sp|Q5RBD9|TBCE_PONAB Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1
Length = 527
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 70 NVMTSVCNIIN--ENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLAT 127
N+++S +I+ + L L LN+SENKL +P + L + +K+L L I
Sbjct: 163 NLLSSWDEVIHIADQLRHLEVLNVSENKLKFPSGSV-LTGTLSALKVLVLNQTGITWAEV 221
Query: 128 IRTLESLSNLEELRLEKN 145
+R LEEL LE N
Sbjct: 222 LRCAMGCPGLEELYLESN 239
>sp|P34390|YLS5_CAEEL Uncharacterized protein F09G8.5 OS=Caenorhabditis elegans
GN=F09G8.5 PE=4 SV=2
Length = 461
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 112 VKILYLAHNNIKDLATIRTLESLSNLEELRLEKNPWTECFNE-QDAYTSEVRKIFPKLLK 170
+K +YL N ++ L + L+ L NL L +++NP C E Y +V ++ P L K
Sbjct: 164 LKEVYLRKNCLESLDELEYLKELPNLRTLWIDENP---CVGEGGQEYRRKVIRVLPNLTK 220
Query: 171 LDDIQLPPPIVFDLEDNIELPKPQ 194
LDD P D ++ IE P+
Sbjct: 221 LDD---KPVTTTDHQEAIEDSIPE 241
>sp|Q4R3P6|LRC40_MACFA Leucine-rich repeat-containing protein 40 OS=Macaca fascicularis
GN=LRRC40 PE=2 SV=1
Length = 602
Score = 35.8 bits (81), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 70 NVMTSVCNIINENLPDLFALNLSENKL-YYPESLISLAKVIPRVKILYLAHNNIKDLATI 128
N +TS+ + + E L +L LN+S NKL +PE + +L + K LYL HN + ++
Sbjct: 115 NQLTSLPSAMRE-LENLQKLNVSHNKLKIFPEEITNLRNL----KCLYLQHNELTCIS-- 167
Query: 129 RTLESLSNLEELRLEKNPWTECFNEQDAYTSEVR 162
E LSNLE+L L N T + +S VR
Sbjct: 168 EGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVR 201
>sp|A4IFA6|ISLR_BOVIN Immunoglobulin superfamily containing leucine-rich repeat protein
OS=Bos taurus GN=ISLR PE=2 SV=1
Length = 428
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 89 LNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELRLEKN 145
L+LS N+L P + +PR++ L+LAHN I+ +A L SLS L+ L L N
Sbjct: 55 LSLSANQL--PSLPGGAFREVPRLQSLWLAHNEIRSVAA-GALASLSQLKSLDLSHN 108
>sp|Q9H9A6|LRC40_HUMAN Leucine-rich repeat-containing protein 40 OS=Homo sapiens GN=LRRC40
PE=1 SV=1
Length = 602
Score = 35.8 bits (81), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 70 NVMTSVCNIINENLPDLFALNLSENKL-YYPESLISLAKVIPRVKILYLAHNNIKDLATI 128
N +TS+ + I E L +L LN+S NKL PE + +L + K LYL HN + ++
Sbjct: 115 NQLTSLPSAIRE-LENLQKLNVSHNKLKILPEEITNLRNL----KCLYLQHNELTCIS-- 167
Query: 129 RTLESLSNLEELRLEKNPWTECFNEQDAYTSEVR 162
E LSNLE+L L N T + +S VR
Sbjct: 168 EGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVR 201
>sp|Q8INT5|DAAF1_DROME Dynein assembly factor 1, axonemal homolog OS=Drosophila
melanogaster GN=dtr PE=2 SV=2
Length = 1483
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 69 SNVMTSVCNIINENLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATI 128
SN + + NI LP L L +S N L ESL L + + +L L++N I D+ +
Sbjct: 109 SNHIRKIQNIGTNVLPVLNTLTISSNYLKDSESLSDLIQC-KTLSVLDLSNNRIDDILIV 167
Query: 129 RTLESLSNLEELRLEKNP 146
+ E + NL+ L L+ NP
Sbjct: 168 KIFEQMLNLKVLVLQGNP 185
>sp|Q4V8C9|LRC56_RAT Leucine-rich repeat-containing protein 56 OS=Rattus norvegicus
GN=Lrrc56 PE=2 SV=1
Length = 548
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 111 RVKILYLAHNNIKDLATIRTLESLSNLEELRLEKN-------PWTECFNEQD-AYTSEVR 162
++++L L NN++DL +R L+ L L LE N P QD Y +EV+
Sbjct: 161 QLEVLDLEGNNVEDLGQMRYLQLCPRLTTLTLEGNLVCLKPDPGPSNKAPQDYNYRAEVK 220
Query: 163 KIFPKLLKLDDI 174
K+ P+L LD++
Sbjct: 221 KLIPQLHILDEV 232
>sp|Q6NUW5|AN32E_DANRE Acidic leucine-rich nuclear phosphoprotein 32 family member E
OS=Danio rerio GN=anp32e PE=1 SV=1
Length = 250
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 82 NLPDLFALNLSENKLYYPESLISLAKVIPRVKILYLAHNNIKDLATIRTLESLSNLEELR 141
+LP L L LS+N + +L +LA+ + L L+ N IK+L+T+ L++L NL+ L
Sbjct: 62 SLPKLRKLELSDNNI--SGTLETLAEKCANLTYLNLSGNKIKELSTLEALQNLKNLKSLD 119
Query: 142 LEKNPWTECFNEQDAYTSEVRKIFPKLLKLDDIQLPPPIVFDLEDN 187
L T + Y + ++ P++ LD FD EDN
Sbjct: 120 LFNCEITTL----EDYRESIFELLPQVTYLDG--------FDAEDN 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 152,746,094
Number of Sequences: 539616
Number of extensions: 6229709
Number of successful extensions: 16897
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 16692
Number of HSP's gapped (non-prelim): 243
length of query: 442
length of database: 191,569,459
effective HSP length: 121
effective length of query: 321
effective length of database: 126,275,923
effective search space: 40534571283
effective search space used: 40534571283
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)