Your job contains 1 sequence.
>psy11420
MTYQKLVSVLESLPKPKPADDAPTSLPRECQGILHPDEHLVPTMKEMGLDESSIPLCKFP
GGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELKK
ILATGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAWSH
GKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADWAM
NAGNWMWLSASAFFHQFFRVYSPVAFGKKTDKFELLLDADWAMNAGNWMWLSASAFFHQF
FRVYSPVAFGKKTDK
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11420
(315 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0016054 - symbol:phr6-4 "(6-4)-photolyase" species... 952 9.7e-96 1
ZFIN|ZDB-GENE-010426-8 - symbol:cry5 "cryptochrome 5" spe... 918 3.9e-92 1
ZFIN|ZDB-GENE-010426-7 - symbol:cry4 "cryptochrome 4" spe... 826 2.2e-82 1
MGI|MGI:1270841 - symbol:Cry1 "cryptochrome 1 (photolyase... 816 2.5e-81 1
UNIPROTKB|E2RMX4 - symbol:CRY1 "Uncharacterized protein" ... 815 3.2e-81 1
RGD|735083 - symbol:Cry1 "cryptochrome 1 (photolyase-like... 815 3.2e-81 1
UNIPROTKB|Q32Q86 - symbol:Cry1 "Cryptochrome-1" species:1... 815 3.2e-81 1
UNIPROTKB|F1SPQ5 - symbol:CRY1 "Uncharacterized protein" ... 814 4.1e-81 1
UNIPROTKB|E1C2Z9 - symbol:CRY1 "Cryptochrome-1" species:9... 812 6.6e-81 1
UNIPROTKB|F1NYE9 - symbol:CRY1 "Cryptochrome-1" species:9... 812 6.6e-81 1
UNIPROTKB|Q8QG61 - symbol:CRY1 "Cryptochrome-1" species:9... 812 6.6e-81 1
UNIPROTKB|Q16526 - symbol:CRY1 "Cryptochrome-1" species:9... 806 2.9e-80 1
UNIPROTKB|Q8WP19 - symbol:CRY1 "Cryptochrome-1" species:9... 805 3.7e-80 1
ZFIN|ZDB-GENE-010426-2 - symbol:cry1a "cryptochrome 1a" s... 802 7.6e-80 1
ZFIN|ZDB-GENE-010426-4 - symbol:cry2a "cryptochrome 2a" s... 798 2.0e-79 1
ZFIN|ZDB-GENE-010426-6 - symbol:cry3 "cryptochrome 3" spe... 796 3.3e-79 1
UNIPROTKB|Q70AD6 - symbol:CRY1 "Cryptochrome-1" species:1... 790 1.4e-78 1
ZFIN|ZDB-GENE-010426-3 - symbol:cry1b "cryptochrome 1b" s... 783 7.9e-78 1
TAIR|locus:2093217 - symbol:UVR3 "UV REPAIR DEFECTIVE 3" ... 779 2.1e-77 1
MGI|MGI:1270859 - symbol:Cry2 "cryptochrome 2 (photolyase... 778 2.7e-77 1
UNIPROTKB|F1PNC9 - symbol:CRY2 "Uncharacterized protein" ... 776 4.3e-77 1
UNIPROTKB|F1SHJ9 - symbol:CRY2 "Uncharacterized protein" ... 774 7.1e-77 1
RGD|620935 - symbol:Cry2 "cryptochrome 2 (photolyase-like... 774 7.1e-77 1
UNIPROTKB|Q923I8 - symbol:Cry2 "Cryptochrome-2" species:1... 774 7.1e-77 1
UNIPROTKB|F1NX44 - symbol:CRY2 "Cryptochrome-2" species:9... 773 9.0e-77 1
UNIPROTKB|F1P3P5 - symbol:CRY2 "Cryptochrome-2" species:9... 773 9.0e-77 1
UNIPROTKB|Q8QG60 - symbol:CRY2 "Cryptochrome-2" species:9... 773 9.0e-77 1
UNIPROTKB|B4DZD6 - symbol:CRY2 "Cryptochrome-2" species:9... 770 1.9e-76 1
UNIPROTKB|Q49AN0 - symbol:CRY2 "Cryptochrome-2" species:9... 770 1.9e-76 1
UNIPROTKB|F1N0J9 - symbol:Bt.20450 "Uncharacterized prote... 769 2.4e-76 1
UNIPROTKB|F1P5X2 - symbol:LOC395100 "Uncharacterized prot... 760 2.1e-75 1
UNIPROTKB|Q2TV23 - symbol:LOC395100 "Cryptochrome-like pr... 760 2.1e-75 1
ZFIN|ZDB-GENE-010426-5 - symbol:cry2b "cryptochrome 2b" s... 717 7.7e-71 1
UNIPROTKB|F1MXB2 - symbol:CRY1 "Uncharacterized protein" ... 682 4.0e-67 1
UNIPROTKB|G4MNA0 - symbol:MGG_02071 "Cryptochrome-1" spec... 397 5.1e-57 2
FB|FBgn0025680 - symbol:cry "cryptochrome" species:7227 "... 473 5.6e-45 1
UNIPROTKB|Q293P8 - symbol:cry "Cryptochrome-1" species:46... 467 2.4e-44 1
UNIPROTKB|Q17DK5 - symbol:cry "Cryptochrome-1" species:71... 454 5.7e-43 1
UNIPROTKB|Q7PYI7 - symbol:Cry1 "Cryptochrome-1" species:7... 452 9.3e-43 1
UNIPROTKB|B0WRR9 - symbol:cry "Cryptochrome-1" species:71... 441 1.4e-41 1
UNIPROTKB|Q7T3R1 - symbol:LOC395100 "Uncharacterized prot... 415 7.8e-39 1
ZFIN|ZDB-GENE-040617-2 - symbol:cry-dash "cryptochrome DA... 306 9.7e-30 2
UNIPROTKB|Q9KNA8 - symbol:phrA "Deoxyribodipyrimidine pho... 320 9.5e-29 1
TIGR_CMR|VC_A0057 - symbol:VC_A0057 "deoxyribodipyrimidin... 320 9.5e-29 1
TIGR_CMR|BA_3180 - symbol:BA_3180 "deoxyribodipyrimidine ... 314 5.9e-28 1
ASPGD|ASPL0000053661 - symbol:cryA species:162425 "Emeric... 308 7.6e-27 1
TIGR_CMR|SO_3384 - symbol:SO_3384 "deoxyribodipyrimidine ... 301 2.9e-26 1
UNIPROTKB|P00914 - symbol:phr "deoxyribodipyrimidine phot... 294 1.1e-25 1
TIGR_CMR|CBU_1176 - symbol:CBU_1176 "deoxyribodipyrimidin... 292 1.9e-25 1
UNIPROTKB|Q48MU1 - symbol:phrB "Deoxyribodipyrimidine pho... 264 2.9e-22 1
TIGR_CMR|CPS_1380 - symbol:CPS_1380 "deoxyribodipyrimidin... 261 5.6e-22 1
TIGR_CMR|SPO_1917 - symbol:SPO_1917 "deoxyribodipyrimidin... 227 2.4e-17 1
TAIR|locus:2138728 - symbol:CRY1 "cryptochrome 1" species... 214 4.4e-15 1
TAIR|locus:2018254 - symbol:CRY2 "cryptochrome 2" species... 209 1.6e-14 1
SGD|S000005913 - symbol:PHR1 "DNA photolyase involved in ... 206 3.3e-14 1
ZFIN|ZDB-GENE-120215-243 - symbol:si:ch73-25i22.2 "si:ch7... 194 1.7e-13 1
UNIPROTKB|Q9KR33 - symbol:cry1 "Cryptochrome DASH" specie... 183 1.3e-11 1
TIGR_CMR|VC_1814 - symbol:VC_1814 "RNA-binding cryptochro... 183 1.3e-11 1
>FB|FBgn0016054 [details] [associations]
symbol:phr6-4 "(6-4)-photolyase" species:7227 "Drosophila
melanogaster" [GO:0006281 "DNA repair" evidence=ISS] [GO:0003914
"DNA (6-4) photolyase activity" evidence=ISS;NAS]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
EMBL:AE014134 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 OMA:CLSARTF
EMBL:BT044074 RefSeq:NP_477188.1 RefSeq:NP_724274.1 UniGene:Dm.7857
SMR:Q0E8P0 STRING:Q0E8P0 EnsemblMetazoa:FBtr0081404
EnsemblMetazoa:FBtr0081405 GeneID:35322 KEGG:dme:Dmel_CG2488
UCSC:CG2488-RA CTD:35322 FlyBase:FBgn0016054 InParanoid:Q0E8P0
OrthoDB:EOG49W0WG GenomeRNAi:35322 NextBio:792949 Uniprot:Q0E8P0
Length = 540
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 179/278 (64%), Positives = 216/278 (77%)
Query: 1 MTYQKLVSVLESL--PK----PKPADDAPTSLPRECQGILHPDEHLVPTMKEMGLDESSI 54
+TYQK + ++E L PK P+ + PT P++ + PTMK++ +
Sbjct: 157 ITYQKFLGIVEQLKVPKVLGVPEKLKNMPTP-PKDEVEQKDSAAYDCPTMKQLVKRPEEL 215
Query: 55 PLCKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLF 114
KFPGGETEAL+R+E+SL ++ WV +FEKPNTAPNSLEPSTTVLSPYLKFGCLS RLF
Sbjct: 216 GPNKFPGGETEALRRMEESLKDEIWVARFEKPNTAPNSLEPSTTVLSPYLKFGCLSARLF 275
Query: 115 YHELKKILATGP-HAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEK 173
+LK+I+ P H++PPVSL+GQ+ WREFYY V + PNFD+M GN C Q+ W +
Sbjct: 276 NQKLKEIIKRQPKHSQPPVSLIGQLMWREFYYTVAAAEPNFDRMLGNVYCMQIPWQEHPD 335
Query: 174 YLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELL 233
+LEAW+HG+TGYPFIDAIMRQLR EGWIHHLARHAVACFLTRGDL++SWEEGQ VFE+LL
Sbjct: 336 HLEAWTHGRTGYPFIDAIMRQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQRVFEQLL 395
Query: 234 LDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
LD DWA+NAGNWMWLSASAFFHQ+FRVYSPVAFGKKTD
Sbjct: 396 LDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTD 433
Score = 213 (80.0 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 37/41 (90%), Positives = 40/41 (97%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
+LLLD DWA+NAGNWMWLSASAFFHQ+FRVYSPVAFGKKTD
Sbjct: 393 QLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTD 433
>ZFIN|ZDB-GENE-010426-8 [details] [associations]
symbol:cry5 "cryptochrome 5" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
ZFIN:ZDB-GENE-010426-8 GO:GO:0006281 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GO:GO:0003914 EMBL:BC044204 IPI:IPI00634330
UniGene:Dr.82314 ProteinModelPortal:Q7ZU36 STRING:Q7ZU36
InParanoid:Q7ZU36 OrthoDB:EOG4G4GQ9 ArrayExpress:Q7ZU36
Uniprot:Q7ZU36
Length = 545
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 168/278 (60%), Positives = 210/278 (75%)
Query: 1 MTYQKLVSVLESLPKPKPADDAPTSLPRECQGILHP--DEHL----VPTMKEMGLDESSI 54
MTY +L SV++++ PK APT+ + +G+ P D+H +PT++++GLD SS+
Sbjct: 174 MTYIRLQSVVKAMGHPKKPIPAPTN--EDMRGVSTPLSDDHEEKFGIPTLEDLGLDTSSL 231
Query: 55 PLCKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLF 114
FPGGE EAL+RL++ + WV KFEKP T+PNSL PSTTVLSPY++FGCLS R+F
Sbjct: 232 GPHLFPGGEQEALRRLDEHMERTNWVCKFEKPKTSPNSLIPSTTVLSPYVRFGCLSARIF 291
Query: 115 YHELKKILATGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKY 174
+ L + H+ PPVSL GQ+ WREF+Y PNF+KM+GN C QVDWD N ++
Sbjct: 292 WWRLADVYRGKTHSDPPVSLHGQLLWREFFYTTAVGIPNFNKMEGNSACVQVDWDNNPEH 351
Query: 175 LEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLL 234
L AW +TG+PFIDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEGQ VFEELLL
Sbjct: 352 LAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLL 411
Query: 235 DADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTDK 272
D+DW++NAGNW WLSAS FFHQ+FRVYSP+AFGKKTDK
Sbjct: 412 DSDWSLNAGNWQWLSASTFFHQYFRVYSPIAFGKKTDK 449
Score = 211 (79.3 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 267 GKKTDKFELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTDK 315
G+K + ELLLD+DW++NAGNW WLSAS FFHQ+FRVYSP+AFGKKTDK
Sbjct: 402 GQKVFE-ELLLDSDWSLNAGNWQWLSASTFFHQYFRVYSPIAFGKKTDK 449
>ZFIN|ZDB-GENE-010426-7 [details] [associations]
symbol:cry4 "cryptochrome 4" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009881 "photoreceptor
activity" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-7
GO:GO:0006281 GO:GO:0009881 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 EMBL:FP085425 IPI:IPI00995476
Ensembl:ENSDART00000126053 Uniprot:E7F1Z7
Length = 582
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 159/277 (57%), Positives = 199/277 (71%)
Query: 1 MTYQKLVSVLESLPKP-KPADDAPTS--LPRECQGILHPDE-HLVPTMKEMGLDESSIPL 56
+TY+K + VL L +P KPA D R+ Q ++ D + VP++ ++GL + L
Sbjct: 170 LTYKKFLHVLSVLGEPEKPARDVSIEDFQRRQQQSMMDVDRVYAVPSLADLGLQVEAEVL 229
Query: 57 CKFPGGETEALKRLEKSLANKE-WVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFY 115
+PGGE+ AL+RLEK +++ WV F KP T PNSL PSTT LSPYL GCLSVR FY
Sbjct: 230 --WPGGESHALQRLEKHFQSQQGWVANFSKPRTIPNSLLPSTTGLSPYLSLGCLSVRTFY 287
Query: 116 HELKKILATGP-HAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKY 174
H L I A H+ PPVSL GQ+ WREF+Y V S TPNF KM+GN IC Q+DW + +
Sbjct: 288 HRLNSIYAQSKNHSLPPVSLQGQVLWREFFYTVASATPNFTKMEGNSICLQIDWYHDPER 347
Query: 175 LEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLL 234
LE W +TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEE LL
Sbjct: 348 LEKWRTAQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEEFLL 407
Query: 235 DADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
DAD+++NAGNWMWLSASAFFH++ R++ PV FG++TD
Sbjct: 408 DADYSVNAGNWMWLSASAFFHKYTRIFCPVRFGRRTD 444
Score = 171 (65.3 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 28/41 (68%), Positives = 37/41 (90%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
E LLDAD+++NAGNWMWLSASAFFH++ R++ PV FG++TD
Sbjct: 404 EFLLDADYSVNAGNWMWLSASAFFHKYTRIFCPVRFGRRTD 444
>MGI|MGI:1270841 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=ISO;IDA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IDA;IMP] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019902 "phosphatase binding" evidence=ISO] [GO:0042752
"regulation of circadian rhythm" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 MGI:MGI:1270841 GO:GO:0005829
GO:GO:0005739 GO:GO:0005654 GO:GO:0000166 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0003690 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
OrthoDB:EOG4DBTDC GO:GO:0000988 EMBL:AB000777 EMBL:AF156986
EMBL:AK162460 EMBL:BC022174 EMBL:BC085499 IPI:IPI00129123
RefSeq:NP_031797.1 UniGene:Mm.26237 ProteinModelPortal:P97784
SMR:P97784 DIP:DIP-38515N IntAct:P97784 STRING:P97784
PhosphoSite:P97784 PRIDE:P97784 Ensembl:ENSMUST00000020227
GeneID:12952 KEGG:mmu:12952 UCSC:uc007gle.1 InParanoid:P97784
NextBio:282662 Bgee:P97784 CleanEx:MM_CRY1 Genevestigator:P97784
GermOnline:ENSMUSG00000020038 Uniprot:P97784
Length = 606
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 151/273 (55%), Positives = 192/273 (70%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q LVS +E P PAD + + +C L H +++ VP+++E+G D + +
Sbjct: 153 FQTLVSKME--PLEMPADTITSDVIGKCMTPLSDDHDEKYGVPSLEELGFDTDGLSSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 391 SINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>UNIPROTKB|E2RMX4 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 CTD:1407 GeneTree:ENSGT00500000044813 OMA:FDTDGLP
GO:GO:0000988 EMBL:AAEX03007373 EMBL:AAEX03007371 EMBL:AAEX03007372
RefSeq:XP_862753.1 Ensembl:ENSCAFT00000002826 GeneID:474528
KEGG:cfa:474528 Uniprot:E2RMX4
Length = 587
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 149/273 (54%), Positives = 192/273 (70%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E P P + + + +C L H +++ VP+++E+G D +P +
Sbjct: 153 FQTLISKME--PLEIPVETITSEVVEKCTTPLSDDHDEKYGVPSLEELGFDTDGLPSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 391 SINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>RGD|735083 [details] [associations]
symbol:Cry1 "cryptochrome 1 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA;ISO] [GO:0009881
"photoreceptor activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA;ISO] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=ISO;ISS] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISO] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=ISO] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 RGD:735083 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0000166 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0048511 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 EMBL:AF545855 EMBL:BC107677
IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 151/273 (55%), Positives = 192/273 (70%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q LVS +E P PAD + + +C L H +++ VP+++E+G D + +
Sbjct: 153 FQTLVSKME--PLEMPADTITSDVIGKCTTPLSDDHDEKYGVPSLEELGFDTDGLSSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 391 SINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>UNIPROTKB|Q32Q86 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:735083 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0048511
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AF545855
EMBL:BC107677 IPI:IPI00395230 RefSeq:NP_942045.2 UniGene:Rn.43646
ProteinModelPortal:Q32Q86 STRING:Q32Q86 PhosphoSite:Q32Q86
PRIDE:Q32Q86 Ensembl:ENSRNOT00000009124 GeneID:299691
KEGG:rno:299691 UCSC:RGD:735083 NextBio:645641 ArrayExpress:Q32Q86
Genevestigator:Q32Q86 GermOnline:ENSRNOG00000006622 Uniprot:Q32Q86
Length = 588
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 151/273 (55%), Positives = 192/273 (70%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q LVS +E P PAD + + +C L H +++ VP+++E+G D + +
Sbjct: 153 FQTLVSKME--PLEMPADTITSDVIGKCTTPLSDDHDEKYGVPSLEELGFDTDGLSSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 391 SINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>UNIPROTKB|F1SPQ5 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:CU463085 EMBL:CU462969 Ensembl:ENSSSCT00000000173
Uniprot:F1SPQ5
Length = 589
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 149/273 (54%), Positives = 192/273 (70%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E P P + + + +C L H +++ VP+++E+G D +P +
Sbjct: 153 FQTLISKME--PLEIPVETITSEVIEKCTTPLSDDHDEKYGVPSLEELGFDTDGLPSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 391 SINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>UNIPROTKB|E1C2Z9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:AADN02006287 EMBL:AADN02006288 EMBL:AADN02006289
IPI:IPI00821281 Ensembl:ENSGALT00000037715 ArrayExpress:E1C2Z9
Uniprot:E1C2Z9
Length = 624
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 148/273 (54%), Positives = 192/273 (70%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E P P + + ++C + H +++ VP+++E+G D +P +
Sbjct: 153 FQTLISRME--PLEMPVETITPEVMQKCTTPVSDDHDEKYGVPSLEELGFDTDGLPSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 391 SVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>UNIPROTKB|F1NYE9 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
IPI:IPI00577266 GeneTree:ENSGT00500000044813 EMBL:AADN02006287
EMBL:AADN02006288 EMBL:AADN02006289 Ensembl:ENSGALT00000020627
ArrayExpress:F1NYE9 Uniprot:F1NYE9
Length = 621
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 148/273 (54%), Positives = 192/273 (70%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E P P + + ++C + H +++ VP+++E+G D +P +
Sbjct: 153 FQTLISRME--PLEMPVETITPEVMQKCTTPVSDDHDEKYGVPSLEELGFDTDGLPSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 391 SVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>UNIPROTKB|Q8QG61 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
EMBL:AY034432 IPI:IPI00577266 RefSeq:NP_989576.1 UniGene:Gga.4107
ProteinModelPortal:Q8QG61 STRING:Q8QG61 GeneID:374093
KEGG:gga:374093 CTD:1407 HOVERGEN:HBG053470 NextBio:20813612
Uniprot:Q8QG61
Length = 621
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 148/273 (54%), Positives = 192/273 (70%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E P P + + ++C + H +++ VP+++E+G D +P +
Sbjct: 153 FQTLISRME--PLEMPVETITPEVMQKCTTPVSDDHDEKYGVPSLEELGFDTDGLPSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 391 SVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>UNIPROTKB|Q16526 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9606 "Homo sapiens"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042752 "regulation
of circadian rhythm" evidence=ISS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IDA]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=IDA]
[GO:0009882 "blue light photoreceptor activity" evidence=NAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009785
"blue light signaling pathway" evidence=NAS] [GO:0019902
"phosphatase binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0003690 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_24941 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 CTD:1407
HOVERGEN:HBG053470 EMBL:D84657 EMBL:D83702 EMBL:BC030519
IPI:IPI00002540 RefSeq:NP_004066.1 UniGene:Hs.151573
ProteinModelPortal:Q16526 SMR:Q16526 IntAct:Q16526
MINT:MINT-1437226 STRING:Q16526 PhosphoSite:Q16526 DMDM:74735764
PaxDb:Q16526 PRIDE:Q16526 DNASU:1407 Ensembl:ENST00000008527
GeneID:1407 KEGG:hsa:1407 UCSC:uc001tmi.3 GeneCards:GC12M107385
HGNC:HGNC:2384 HPA:CAB018762 MIM:601933 neXtProt:NX_Q16526
PharmGKB:PA26904 InParanoid:Q16526 OMA:FDTDGLP OrthoDB:EOG4DBTDC
PhylomeDB:Q16526 ChiTaRS:CRY1 GenomeRNAi:1407 NextBio:5753
ArrayExpress:Q16526 Bgee:Q16526 CleanEx:HS_CRY1
Genevestigator:Q16526 GermOnline:ENSG00000008405 GO:GO:0000988
Uniprot:Q16526
Length = 586
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 148/273 (54%), Positives = 191/273 (69%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E P P + + + +C L H +++ VP+++E+G D + +
Sbjct: 153 FQTLISKME--PLEIPVETITSEVIEKCTTPLSDDHDEKYGVPSLEELGFDTDGLSSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 391 SINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>UNIPROTKB|Q8WP19 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:9541 "Macaca
fascicularis" [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0048511 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AB074458
ProteinModelPortal:Q8WP19 Uniprot:Q8WP19
Length = 586
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 148/273 (54%), Positives = 191/273 (69%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E P P + + + +C L H +++ VP+++E+G D + +
Sbjct: 153 FQTLISKME--PLEIPVETITSEVIEKCTTPLSDDHDEKYGVPSLEELGFDTDGLSSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYKKVKRNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 391 SINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>ZFIN|ZDB-GENE-010426-2 [details] [associations]
symbol:cry1a "cryptochrome 1a" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0009416 "response to light
stimulus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IDA] [GO:0042542
"response to hydrogen peroxide" evidence=IEP] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-2
GO:GO:0045892 GO:GO:0009649 GO:GO:0006281 GO:GO:0005667
GO:GO:0009416 GO:GO:0042542 Gene3D:3.40.50.620 InterPro:IPR014729
KO:K02295 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC124762 IPI:IPI00650675 UniGene:Dr.82313
ProteinModelPortal:Q08BE4 STRING:Q08BE4 KEGG:dre:100003956
InParanoid:Q08BE4 NextBio:20786059 ArrayExpress:Q08BE4
Uniprot:Q08BE4
Length = 619
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 149/273 (54%), Positives = 190/273 (69%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E++ P A P C L H ++ VP+++E+G D + +
Sbjct: 153 FQTLISRMEAVETPAETITAEVMGP--CTTPLSDDHDEKFGVPSLEELGFDTEGLSSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYRKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS S+FF QFF Y PV+FG++TD
Sbjct: 391 SVNAGSWMWLSCSSFFQQFFHCYCPVSFGRRTD 423
Score = 176 (67.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 29/41 (70%), Positives = 36/41 (87%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV+FG++TD
Sbjct: 383 ELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVSFGRRTD 423
>ZFIN|ZDB-GENE-010426-4 [details] [associations]
symbol:cry2a "cryptochrome 2a" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0009266 "response to
temperature stimulus" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-4
GO:GO:0006281 GO:GO:0009416 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0009266 EMBL:BX927144 eggNOG:COG0415 HOGENOM:HOG000245622
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470
GeneTree:ENSGT00500000044813 OrthoDB:EOG4DBTDC EMBL:BX784023
IPI:IPI00501773 UniGene:Dr.116325 Ensembl:ENSDART00000100222
Uniprot:B0S7X5
Length = 659
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 146/276 (52%), Positives = 191/276 (69%)
Query: 1 MTYQKLVSVLESLPKPK-PADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPL 56
+TY++ +++ + P+ P + S+ C + H D++ VP+++E+G D +P
Sbjct: 148 LTYKRFQTLISRMDPPEMPVETLSNSIMGCCVTPVSEDHGDKYGVPSLEELGFDIEGLPS 207
Query: 57 CKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYH 116
+PGGETEAL R+E+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY
Sbjct: 208 AVWPGGETEALTRIERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYF 267
Query: 117 ELKKILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYL 175
+L + + PP+SL GQ+ WREF+Y + P FDKM+GN IC ++ WD N + L
Sbjct: 268 KLTDLYRKVKKTSTPPLSLYGQLLWREFFYTAATTNPRFDKMEGNPICVRIPWDKNPEAL 327
Query: 176 EAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLD 235
W+ KTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLD
Sbjct: 328 AKWAEAKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLD 387
Query: 236 ADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
ADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 388 ADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>ZFIN|ZDB-GENE-010426-6 [details] [associations]
symbol:cry3 "cryptochrome 3" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0009266 "response
to temperature stimulus" evidence=IDA] [GO:0009416 "response to
light stimulus" evidence=IDA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-6
GO:GO:0045892 GO:GO:0006281 GO:GO:0005667 GO:GO:0009416
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0009266 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042252
IPI:IPI00508328 UniGene:Dr.130308 ProteinModelPortal:Q9I913
STRING:Q9I913 InParanoid:Q9I913 ArrayExpress:Q9I913 Uniprot:Q9I913
Length = 598
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 150/273 (54%), Positives = 191/273 (69%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL--HPDEHL-VPTMKEMGLDESSIPLCKF 59
+Q +V+ LE LP+ KP C+ + + DEH VP+++E+G L +
Sbjct: 153 FQAIVNRLE-LPR-KPLPTITQEQMARCRTQISDNHDEHYGVPSLEELGFRTQGDSLHVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
GGETEAL+RL K L K WV FE+P + SL PS T LSPYL+FGCLS R+FY+ L+
Sbjct: 211 KGGETEALERLNKHLDRKAWVANFERPRISGQSLFPSPTGLSPYLRFGCLSCRVFYYNLR 270
Query: 120 KI-LATGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ + + PP+SL GQ+ WREF+Y G++ PNFD M+GN IC Q+ WD N + L W
Sbjct: 271 DLFMKLRRRSSPPLSLFGQLLWREFFYTAGTNNPNFDHMEGNPICVQIPWDHNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWE G VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 391 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 423
Score = 178 (67.7 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 423
>UNIPROTKB|Q70AD6 [details] [associations]
symbol:CRY1 "Cryptochrome-1" species:134510 "Nannospalax
judaei" [GO:0042752 "regulation of circadian rhythm" evidence=ISS]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000166 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 HOVERGEN:HBG053470 EMBL:AJ606298
ProteinModelPortal:Q70AD6 Uniprot:Q70AD6
Length = 587
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 145/273 (53%), Positives = 189/273 (69%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E P P + + + +C L H +++ VP+++E+G D + +
Sbjct: 153 FQTLISKME--PLEIPVETITSEVIEKCTTPLSDDHDEKYGVPSLEELGFDTDGLSSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L + WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERRAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLT DL++SWEEG VFEELLLDADW
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTGSDLWISWEEGMKVFEELLLDADW 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 391 SINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>ZFIN|ZDB-GENE-010426-3 [details] [associations]
symbol:cry1b "cryptochrome 1b" species:7955 "Danio
rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-3
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 HOVERGEN:HBG053470 EMBL:AB042249
IPI:IPI00863245 UniGene:Dr.158985 ProteinModelPortal:Q9I916
STRING:Q9I916 ArrayExpress:Q9I916 Uniprot:Q9I916
Length = 606
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 143/276 (51%), Positives = 191/276 (69%)
Query: 1 MTYQKLVSVLESL-PKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPL 56
+TY++ +++ + P PA+ + +C + H ++ VP+++E+G + +
Sbjct: 148 LTYKRFQTLISRMDPVEMPAETITAEIMGKCSTPVSDDHDNKFGVPSLEELGFETEGLST 207
Query: 57 CKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYH 116
+PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY
Sbjct: 208 AVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYF 267
Query: 117 ELKKILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYL 175
+L + ++ P +SL GQ+ WREF+Y ++ P+FDKM+ N IC Q+ WD N + L
Sbjct: 268 KLTDLYRKVKKNSTPSLSLYGQLLWREFFYTAATNNPHFDKMEFNPICVQIPWDRNPEAL 327
Query: 176 EAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLD 235
W+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEELLLD
Sbjct: 328 AKWAEGQTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLD 387
Query: 236 ADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
ADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 388 ADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+WMWLS S+FF QFF Y PV FG++TD
Sbjct: 383 ELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVGFGRRTD 423
>TAIR|locus:2093217 [details] [associations]
symbol:UVR3 "UV REPAIR DEFECTIVE 3" species:3702
"Arabidopsis thaliana" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISS;IDA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050
Pfam:PF00875 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009411
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 EMBL:AB017071
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AB003687 EMBL:AB017331 IPI:IPI00545198
IPI:IPI00657032 RefSeq:NP_001030703.1 RefSeq:NP_566520.1
UniGene:At.188 PDB:3FY4 PDBsum:3FY4 ProteinModelPortal:O48652
SMR:O48652 STRING:O48652 EnsemblPlants:AT3G15620.1 GeneID:820804
KEGG:ath:AT3G15620 GeneFarm:1941 TAIR:At3g15620 InParanoid:O48652
OMA:CLSARTF PhylomeDB:O48652 ProtClustDB:CLSN2688412
BioCyc:MetaCyc:MONOMER-15021 EvolutionaryTrace:O48652
Genevestigator:O48652 GO:GO:0003914 Uniprot:O48652
Length = 556
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 141/234 (60%), Positives = 176/234 (75%)
Query: 41 VPTMKEMGL-DESSIPLCKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNS-LEPSTT 98
VP+++E+G D+ F GGE+EALKRL KS+++K WV FEKP P++ L+P+TT
Sbjct: 218 VPSLEELGYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPATT 277
Query: 99 VLSPYLKFGCLSVRLFYHELKKILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKM 157
V+SPYLKFGCLS R FY L+ I H PPVSLLGQ+ WREF+Y TPNFDKM
Sbjct: 278 VMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKM 337
Query: 158 KGNKICCQVDWDTNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGD 217
KGN+IC Q+ W+ + L AW GKTGYP+IDAIM QL GW+HHLARH VACFLTRGD
Sbjct: 338 KGNRICKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGD 397
Query: 218 LYLSWEEGQSVFEELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
L++ WE+G+ VFE LL+D+DWA+N GNWMWLS S+FF+QF R+YSP++FGKK D
Sbjct: 398 LFIHWEQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYSPISFGKKYD 451
Score = 179 (68.1 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 31/45 (68%), Positives = 39/45 (86%)
Query: 271 DKFE-LLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
D FE LL+D+DWA+N GNWMWLS S+FF+QF R+YSP++FGKK D
Sbjct: 407 DVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYSPISFGKKYD 451
>MGI|MGI:1270859 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003684 "damaged DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009881 "photoreceptor activity" evidence=IEA] [GO:0016829
"lyase activity" evidence=IEA] [GO:0018298 "protein-chromophore
linkage" evidence=IEA] [GO:0019902 "phosphatase binding"
evidence=ISO] [GO:0032515 "negative regulation of phosphoprotein
phosphatase activity" evidence=ISO] [GO:0042752 "regulation of
circadian rhythm" evidence=IMP] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 MGI:MGI:1270859 GO:GO:0005829 GO:GO:0005739
GO:GO:0005654 GO:GO:0000166 GO:GO:0003684 GO:GO:0007623
GO:GO:0006281 GO:GO:0006351 GO:GO:0042752 GO:GO:0000122
GO:GO:0006606 GO:GO:0003697 GO:GO:0009881 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 Reactome:REACT_109335
Reactome:REACT_24972 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AF156987 EMBL:AK041696
EMBL:AK133781 EMBL:BC054794 EMBL:BC066799 EMBL:AK172994
EMBL:AB003433 IPI:IPI00128234 RefSeq:NP_001106804.1
RefSeq:NP_034093.1 UniGene:Mm.254181 ProteinModelPortal:Q9R194
SMR:Q9R194 DIP:DIP-38517N IntAct:Q9R194 STRING:Q9R194
PhosphoSite:Q9R194 PRIDE:Q9R194 Ensembl:ENSMUST00000090559
Ensembl:ENSMUST00000111278 GeneID:12953 KEGG:mmu:12953
InParanoid:Q9R194 OMA:LCKHLLI NextBio:282666 Bgee:Q9R194
CleanEx:MM_CRY2 Genevestigator:Q9R194 GermOnline:ENSMUSG00000068742
Uniprot:Q9R194
Length = 592
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 147/273 (53%), Positives = 189/273 (69%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E LPK KPA + C+ + H D + VP+++E+G + +
Sbjct: 171 FQALISRME-LPK-KPAVAVSSQQMESCRAEIQENHDDTYGVPSLEELGFPTEGLGPAVW 228
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
GGETEAL RL+K L K WV +E+P NSL S T LSPYL+FGCLS RLFY+ L
Sbjct: 229 QGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLW 288
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FD+M+GN IC Q+ WD N + L W
Sbjct: 289 DLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWDRNPEALAKW 348
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ GKTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWE G VF+ELLLDAD+
Sbjct: 349 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADF 408
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 409 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 441
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 401 ELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 441
>UNIPROTKB|F1PNC9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 CTD:1408 OMA:LCKHLLI EMBL:AAEX03011505
RefSeq:XP_540761.2 Ensembl:ENSCAFT00000014927 GeneID:483641
KEGG:cfa:483641 Uniprot:F1PNC9
Length = 593
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 145/273 (53%), Positives = 188/273 (68%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q ++S +E LPK KP + C+ + H D + VP+++E+G + +
Sbjct: 172 FQAIISRME-LPK-KPVGSVTSQQMESCRADIQDNHDDTYGVPSLEELGFPTEGLGPAVW 229
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
GGETEAL RL+K L K WV +E+P NSL S T LSPYL+FGCLS RLFY+ L
Sbjct: 230 QGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLW 289
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FD+M+GN IC Q+ WD N + L W
Sbjct: 290 DLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWDRNPEALAKW 349
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ GKTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWE G VF+ELLLDAD+
Sbjct: 350 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADF 409
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 410 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 442
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 402 ELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 442
>UNIPROTKB|F1SHJ9 [details] [associations]
symbol:CRY2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
OMA:LCKHLLI EMBL:FP101987 Ensembl:ENSSSCT00000014494 Uniprot:F1SHJ9
Length = 613
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 145/273 (53%), Positives = 188/273 (68%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E LPK KP + C+ + H + + VP+++E+G + +
Sbjct: 192 FQALISRME-LPK-KPVGSVTSQQMESCRAEIQENHDETYGVPSLEELGFPTEGLGPAVW 249
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
GGETEAL RL+K L K WV +E+P NSL S T LSPYL+FGCLS RLFY+ L
Sbjct: 250 QGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLW 309
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FD+M+GN IC Q+ WD N + L W
Sbjct: 310 DLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWDRNPEALAKW 369
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ GKTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWE G VF+ELLLDAD+
Sbjct: 370 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADF 429
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 430 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 462
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 422 ELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 462
>RGD|620935 [details] [associations]
symbol:Cry2 "cryptochrome 2 (photolyase-like)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003684 "damaged DNA
binding" evidence=IEA;ISO] [GO:0003697 "single-stranded DNA
binding" evidence=IEA;ISO] [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;IEP;ISO] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0019902 "phosphatase binding" evidence=ISO]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=ISO] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA;ISO] [GO:2000118 "regulation of
sodium-dependent phosphate transport" evidence=IEA;ISO] [GO:0000719
"photoreactive repair" evidence=ISO] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISO]
[GO:0003914 "DNA (6-4) photolyase activity" evidence=ISO]
InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0006351
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877
IPI:IPI00203659 RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 146/273 (53%), Positives = 188/273 (68%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E LPK KP + C+ + H D + VP+++E+G + +
Sbjct: 171 FQALISRME-LPK-KPVGAVSSQHMENCRAEIQENHDDTYGVPSLEELGFPTEGLGPAVW 228
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
GGETEAL RL+K L K WV +E+P NSL S T LSPYL+FGCLS RLFY+ L
Sbjct: 229 QGGETEALVRLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLW 288
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FD+M+GN IC Q+ WD N + L W
Sbjct: 289 DLYRKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWDRNPEALAKW 348
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ GKTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWE G VF+ELLLDAD+
Sbjct: 349 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADF 408
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 409 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 441
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 401 ELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 441
>UNIPROTKB|Q923I8 [details] [associations]
symbol:Cry2 "Cryptochrome-2" species:10116 "Rattus
norvegicus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
RGD:620935 GO:GO:0005739 GO:GO:0005634 GO:GO:0000166 GO:GO:0003684
GO:GO:0007623 GO:GO:0006281 GO:GO:0006351 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 GO:GO:0009881
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470 GO:GO:0000988
CTD:1408 OrthoDB:EOG4VT5WZ EMBL:AY033877 IPI:IPI00203659
RefSeq:NP_596896.1 UniGene:Rn.21150 HSSP:Q43125
ProteinModelPortal:Q923I8 STRING:Q923I8 PRIDE:Q923I8 GeneID:170917
KEGG:rno:170917 UCSC:RGD:620935 InParanoid:Q923I8 NextBio:621399
ArrayExpress:Q923I8 Genevestigator:Q923I8
GermOnline:ENSRNOG00000007478 Uniprot:Q923I8
Length = 594
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 146/273 (53%), Positives = 188/273 (68%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E LPK KP + C+ + H D + VP+++E+G + +
Sbjct: 171 FQALISRME-LPK-KPVGAVSSQHMENCRAEIQENHDDTYGVPSLEELGFPTEGLGPAVW 228
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
GGETEAL RL+K L K WV +E+P NSL S T LSPYL+FGCLS RLFY+ L
Sbjct: 229 QGGETEALVRLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLW 288
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FD+M+GN IC Q+ WD N + L W
Sbjct: 289 DLYRKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWDRNPEALAKW 348
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ GKTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWE G VF+ELLLDAD+
Sbjct: 349 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADF 408
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 409 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 441
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 401 ELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 441
>UNIPROTKB|F1NX44 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] InterPro:IPR005101 Pfam:PF03441
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739 GO:GO:0005634
GO:GO:0003684 GO:GO:0007623 GO:GO:0006281 GO:GO:0042752
GO:GO:0000122 GO:GO:0006606 GO:GO:0003697 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 GO:GO:0000988 IPI:IPI00572393
OMA:DIQENHD EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
Ensembl:ENSGALT00000038345 ArrayExpress:F1NX44 Uniprot:F1NX44
Length = 537
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 145/273 (53%), Positives = 189/273 (69%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q ++S +E LPK KP + C+ + H D + VP+++E+G + +
Sbjct: 117 FQAIISRME-LPK-KPVSSIVSQQMETCKVDIQENHDDVYGVPSLEELGFPTDGLAPAVW 174
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
GGETEAL RL+K L K WV +E+P NSL S T LSPYL+FGCLS RLFY+ L
Sbjct: 175 QGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYHLW 234
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
++ ++ PP+SL GQ+ WREF+Y ++ P FD+M+GN IC Q+ WD N + L W
Sbjct: 235 ELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNPICIQIPWDKNPEALAKW 294
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ GKTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWE G VF+ELLLDAD+
Sbjct: 295 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADF 354
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 355 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 387
Score = 168 (64.2 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 347 ELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 387
>UNIPROTKB|F1P3P5 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0042752 "regulation of circadian rhythm"
evidence=IEA] [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:AADN02033514 EMBL:AADN02033515 EMBL:AADN02033516
IPI:IPI00821771 Ensembl:ENSGALT00000013745 ArrayExpress:F1P3P5
Uniprot:F1P3P5
Length = 531
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 145/273 (53%), Positives = 189/273 (69%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q ++S +E LPK KP + C+ + H D + VP+++E+G + +
Sbjct: 111 FQAIISRME-LPK-KPVSSIVSQQMETCKVDIQENHDDVYGVPSLEELGFPTDGLAPAVW 168
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
GGETEAL RL+K L K WV +E+P NSL S T LSPYL+FGCLS RLFY+ L
Sbjct: 169 QGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYHLW 228
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
++ ++ PP+SL GQ+ WREF+Y ++ P FD+M+GN IC Q+ WD N + L W
Sbjct: 229 ELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNPICIQIPWDKNPEALAKW 288
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ GKTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWE G VF+ELLLDAD+
Sbjct: 289 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADF 348
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 349 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 381
Score = 168 (64.2 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 341 ELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 381
>UNIPROTKB|Q8QG60 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9031 "Gallus gallus"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009881 "photoreceptor activity"
evidence=IEA] [GO:0018298 "protein-chromophore linkage"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR005101 Pfam:PF03441 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0006281 GO:GO:0006351
GO:GO:0048511 GO:GO:0009881 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AY034433
EMBL:AY046568 EMBL:AF251344 IPI:IPI00572393 RefSeq:NP_989575.1
UniGene:Gga.20033 HSSP:P05327 ProteinModelPortal:Q8QG60
STRING:Q8QG60 Ensembl:ENSGALT00000038344 GeneID:374092
KEGG:gga:374092 CTD:1408 InParanoid:Q8QG60 NextBio:20813611
Uniprot:Q8QG60
Length = 582
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 145/273 (53%), Positives = 189/273 (69%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q ++S +E LPK KP + C+ + H D + VP+++E+G + +
Sbjct: 162 FQAIISRME-LPK-KPVSSIVSQQMETCKVDIQENHDDVYGVPSLEELGFPTDGLAPAVW 219
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
GGETEAL RL+K L K WV +E+P NSL S T LSPYL+FGCLS RLFY+ L
Sbjct: 220 QGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLW 279
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
++ ++ PP+SL GQ+ WREF+Y ++ P FD+M+GN IC Q+ WD N + L W
Sbjct: 280 ELYKKVKRNSTPPLSLYGQLLWREFFYTAATNNPKFDRMEGNPICIQIPWDKNPEALAKW 339
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ GKTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWE G VF+ELLLDAD+
Sbjct: 340 AEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADF 399
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 400 SVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 432
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 392 ELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 432
>UNIPROTKB|B4DZD6 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0003913 "DNA photolyase activity" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0005739 GO:GO:0005634 GO:GO:0005737
GO:GO:0007623 GO:GO:0006281 GO:GO:0042752 GO:GO:0006606
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AC068385
HOGENOM:HOG000245622 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOVERGEN:HBG053470 CTD:1408 IPI:IPI00216898
RefSeq:NP_066940.2 UniGene:Hs.532491 DNASU:1408 GeneID:1408
KEGG:hsa:1408 HGNC:HGNC:2385 PharmGKB:PA26905 GenomeRNAi:1408
NextBio:5757 OMA:LCKHLLI EMBL:AK302865 ProteinModelPortal:B4DZD6
SMR:B4DZD6 STRING:B4DZD6 PRIDE:B4DZD6 Ensembl:ENST00000443527
UCSC:uc010rgn.2 ArrayExpress:B4DZD6 Bgee:B4DZD6 Uniprot:B4DZD6
Length = 614
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 143/276 (51%), Positives = 189/276 (68%)
Query: 1 MTYQKLVSVLESLPKPKPADDAPTSLPRE-CQGIL---HPDEHLVPTMKEMGLDESSIPL 56
+TY++ +++ + PK TS E C+ + H + + VP+++E+G +
Sbjct: 188 LTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLEELGFPTEGLGP 247
Query: 57 CKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYH 116
+ GGETEAL RL+K L K WV +E+P NSL S T LSPYL+FGCLS RLFY+
Sbjct: 248 AVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYY 307
Query: 117 ELKKILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYL 175
L + ++ PP+SL GQ+ WREF+Y ++ P FD+M+GN IC Q+ WD N + L
Sbjct: 308 RLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWDRNPEAL 367
Query: 176 EAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLD 235
W+ GKTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWE G VF+ELLLD
Sbjct: 368 AKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLD 427
Query: 236 ADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
AD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 428 ADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 463
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 423 ELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 463
>UNIPROTKB|Q49AN0 [details] [associations]
symbol:CRY2 "Cryptochrome-2" species:9606 "Homo sapiens"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IDA] [GO:0003914 "DNA (6-4) photolyase activity"
evidence=IDA] [GO:0000719 "photoreactive repair" evidence=IDA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0009785 "blue light signaling pathway"
evidence=NAS] [GO:0009882 "blue light photoreceptor activity"
evidence=NAS] [GO:0019902 "phosphatase binding" evidence=IPI]
[GO:0032515 "negative regulation of phosphoprotein phosphatase
activity" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=ISS] [GO:0005576 "extracellular region" evidence=IDA]
[GO:2000118 "regulation of sodium-dependent phosphate transport"
evidence=IDA] [GO:0000988 "protein binding transcription factor
activity" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0005737 GO:GO:0005576
GO:GO:0000166 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0006351 GO:GO:0042752 GO:GO:0000122 GO:GO:0006606
GO:GO:0003697 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
Reactome:REACT_24941 EMBL:AC068385 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 HOVERGEN:HBG053470
GO:GO:0000988 CTD:1408 EMBL:AK294904 EMBL:BC035161 EMBL:BC041814
EMBL:AB014558 IPI:IPI00216898 IPI:IPI00895886 RefSeq:NP_001120929.1
RefSeq:NP_066940.2 UniGene:Hs.532491 ProteinModelPortal:Q49AN0
SMR:Q49AN0 IntAct:Q49AN0 STRING:Q49AN0 DMDM:118572252 PaxDb:Q49AN0
PRIDE:Q49AN0 DNASU:1408 Ensembl:ENST00000417225 GeneID:1408
KEGG:hsa:1408 UCSC:uc009ykw.3 UCSC:uc010rgo.2 GeneCards:GC11P045868
H-InvDB:HIX0201587 HGNC:HGNC:2385 HPA:HPA037577 MIM:603732
neXtProt:NX_Q49AN0 PharmGKB:PA26905 InParanoid:Q49AN0
OrthoDB:EOG4VT5WZ PhylomeDB:Q49AN0 GenomeRNAi:1408 NextBio:5757
ArrayExpress:Q49AN0 Bgee:Q49AN0 CleanEx:HS_CRY2
Genevestigator:Q49AN0 GermOnline:ENSG00000121671 GO:GO:0032515
GO:GO:2000118 Uniprot:Q49AN0
Length = 593
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 143/276 (51%), Positives = 189/276 (68%)
Query: 1 MTYQKLVSVLESLPKPKPADDAPTSLPRE-CQGIL---HPDEHLVPTMKEMGLDESSIPL 56
+TY++ +++ + PK TS E C+ + H + + VP+++E+G +
Sbjct: 167 LTYKRFQAIISRMELPKKPVGLVTSQQMESCRAEIQENHDETYGVPSLEELGFPTEGLGP 226
Query: 57 CKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYH 116
+ GGETEAL RL+K L K WV +E+P NSL S T LSPYL+FGCLS RLFY+
Sbjct: 227 AVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYY 286
Query: 117 ELKKILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYL 175
L + ++ PP+SL GQ+ WREF+Y ++ P FD+M+GN IC Q+ WD N + L
Sbjct: 287 RLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWDRNPEAL 346
Query: 176 EAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLD 235
W+ GKTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWE G VF+ELLLD
Sbjct: 347 AKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLD 406
Query: 236 ADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
AD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 407 ADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 442
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 402 ELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 442
>UNIPROTKB|F1N0J9 [details] [associations]
symbol:Bt.20450 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000118 "regulation of sodium-dependent phosphate
transport" evidence=IEA] [GO:0042752 "regulation of circadian
rhythm" evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0000988 "protein binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913
"DNA photolyase activity" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005739
GO:GO:0005634 GO:GO:0003684 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0006606 GO:GO:0003697
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0000988
EMBL:DAAA02041566 EMBL:DAAA02041564 EMBL:DAAA02041565
IPI:IPI00698451 Ensembl:ENSBTAT00000028277 OMA:DIQENHD
Uniprot:F1N0J9
Length = 610
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 142/276 (51%), Positives = 190/276 (68%)
Query: 1 MTYQKLVSVLESLPKPKPADDAPTSLPRE-CQGIL---HPDEHLVPTMKEMGLDESSIPL 56
+TY++ +++ + P+ + TS E C+ + H + + VP+++E+G +
Sbjct: 184 LTYKRFQAIISRMELPRKPVGSVTSQQMEGCRAEIQESHDETYGVPSLEELGFPTEGLGP 243
Query: 57 CKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYH 116
+ GGETEAL RL+K L K WV +E+P NSL S T LSPYL+FGCLS RLFY+
Sbjct: 244 AVWQGGETEALARLDKHLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYY 303
Query: 117 ELKKILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYL 175
L + ++ PP+SL GQ+ WREF+Y ++ P FD+M+GN IC Q+ WD N + L
Sbjct: 304 RLWDLYKKVKRNSTPPLSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWDRNPEAL 363
Query: 176 EAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLD 235
W+ GKTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWE G VF+ELLLD
Sbjct: 364 AKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLD 423
Query: 236 ADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
AD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 424 ADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 459
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAG+WMWLS SAFF QFF Y PV FG++TD
Sbjct: 419 ELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTD 459
>UNIPROTKB|F1P5X2 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
IPI:IPI00821352 Ensembl:ENSGALT00000040673 OMA:WTASEEE
ArrayExpress:F1P5X2 Uniprot:F1P5X2
Length = 547
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 149/277 (53%), Positives = 188/277 (67%)
Query: 1 MTYQKLVSVLESLPKPKPADDAPTSLPRECQGILHPDEHL-----VPTMKEMGLDESSIP 55
+TY++ + +L L P+ PT+ + Q P+ L VP ++ + SI
Sbjct: 167 LTYKRFLRILSLLGDPEVPVRNPTA--EDFQRCSPPELGLAECYGVPLPTDLKIPPESIS 224
Query: 56 LCKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFY 115
+ GGE+E L+RLE+ LA++ WV F KP T PNSL PSTT LSPY GCLSVR F+
Sbjct: 225 --PWRGGESEGLQRLEQHLADQGWVASFTKPKTVPNSLLPSTTGLSPYFSTGCLSVRSFF 282
Query: 116 HELKKILATGPH-AKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKY 174
+ L I A H + PPVSL GQ+ WREF+Y V S TPNF KM GN IC Q+ W + +
Sbjct: 283 YRLSNIYAQAKHHSLPPVSLQGQLLWREFFYTVASATPNFTKMAGNPICLQIRWYEDAER 342
Query: 175 LEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLL 234
L W +TG+P+IDAIM QLR EGWIHHLARHA ACFLTRGDL++SWEEG VFEELLL
Sbjct: 343 LHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGDLWISWEEGMKVFEELLL 402
Query: 235 DADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
DAD+++NAGNWMWLSASAFFH + R++ PV FG++TD
Sbjct: 403 DADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTD 439
Score = 174 (66.3 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 29/41 (70%), Positives = 37/41 (90%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAGNWMWLSASAFFH + R++ PV FG++TD
Sbjct: 399 ELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTD 439
>UNIPROTKB|Q2TV23 [details] [associations]
symbol:LOC395100 "Cryptochrome-like protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 GO:GO:0006281
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 GeneTree:ENSGT00500000044813 EMBL:AADN02063941
EMBL:AY300013 IPI:IPI00782853 RefSeq:NP_001034685.1
UniGene:Gga.5544 Ensembl:ENSGALT00000000143 GeneID:395100
KEGG:gga:395100 InParanoid:Q2TV23 OrthoDB:EOG479F6W
NextBio:20815193 Uniprot:Q2TV23
Length = 529
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 149/277 (53%), Positives = 188/277 (67%)
Query: 1 MTYQKLVSVLESLPKPKPADDAPTSLPRECQGILHPDEHL-----VPTMKEMGLDESSIP 55
+TY++ + +L L P+ PT+ + Q P+ L VP ++ + SI
Sbjct: 149 LTYKRFLRILSLLGDPEVPVRNPTA--EDFQRCSPPELGLAECYGVPLPTDLKIPPESIS 206
Query: 56 LCKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFY 115
+ GGE+E L+RLE+ LA++ WV F KP T PNSL PSTT LSPY GCLSVR F+
Sbjct: 207 --PWRGGESEGLQRLEQHLADQGWVASFTKPKTVPNSLLPSTTGLSPYFSTGCLSVRSFF 264
Query: 116 HELKKILATGPH-AKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKY 174
+ L I A H + PPVSL GQ+ WREF+Y V S TPNF KM GN IC Q+ W + +
Sbjct: 265 YRLSNIYAQAKHHSLPPVSLQGQLLWREFFYTVASATPNFTKMAGNPICLQIRWYEDAER 324
Query: 175 LEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLL 234
L W +TG+P+IDAIM QLR EGWIHHLARHA ACFLTRGDL++SWEEG VFEELLL
Sbjct: 325 LHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGDLWISWEEGMKVFEELLL 384
Query: 235 DADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
DAD+++NAGNWMWLSASAFFH + R++ PV FG++TD
Sbjct: 385 DADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTD 421
Score = 174 (66.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 29/41 (70%), Positives = 37/41 (90%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAGNWMWLSASAFFH + R++ PV FG++TD
Sbjct: 381 ELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTD 421
>ZFIN|ZDB-GENE-010426-5 [details] [associations]
symbol:cry2b "cryptochrome 2b" species:7955 "Danio
rerio" [GO:0006281 "DNA repair" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR005101
Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875 ZFIN:ZDB-GENE-010426-5
GO:GO:0045892 GO:GO:0006281 Gene3D:3.40.50.620 InterPro:IPR014729
HOGENOM:HOG000245622 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
HOVERGEN:HBG053470 EMBL:BC096780 EMBL:BC164795 IPI:IPI00498674
UniGene:Dr.31496 InParanoid:Q4V9Q3 Uniprot:Q4V9Q3
Length = 639
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 134/279 (48%), Positives = 185/279 (66%)
Query: 1 MTYQKLVSVLESLPKPKPADDAPT-SLPRECQGIL---HPDEHLVPTMKEMGLDESSIPL 56
+TY++ +++ S+ P P +P + +C + H D++ VP ++E+G D +
Sbjct: 148 LTYKRFQTLVSSMEPPDPPLSSPDRGMMGKCVTPISENHRDKYGVPLLEELGFDTEGLAP 207
Query: 57 CKFPGGETEALKRLEKSL---ANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRL 113
+PGGE+EALKR+E+ L + W FE+P + L S LSPYL+FGCLS RL
Sbjct: 208 AVWPGGESEALKRMERHLGPDSTVAWQENFERPKMNASPLMASPLGLSPYLRFGCLSCRL 267
Query: 114 FYHELKKILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNE 172
FY +L ++ + P +SL +I WREF+Y ++ P FD+M+GN IC ++ WD N
Sbjct: 268 FYCKLTQLYKKVKKNMNPSISLYDKILWREFFYTAATNNPRFDRMEGNPICIRIPWDRNA 327
Query: 173 KYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEEL 232
+ L W+ KTG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG VFEEL
Sbjct: 328 EALAKWAEAKTGFPWIDAIMMQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEEL 387
Query: 233 LLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
LLDADW++NAG+W+ S S+FF QFF Y PV FG++ D
Sbjct: 388 LLDADWSVNAGSWLCHSCSSFFQQFFHCYCPVGFGRRID 426
Score = 146 (56.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDADW++NAG+W+ S S+FF QFF Y PV FG++ D
Sbjct: 386 ELLLDADWSVNAGSWLCHSCSSFFQQFFHCYCPVGFGRRID 426
>UNIPROTKB|F1MXB2 [details] [associations]
symbol:CRY1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042752 "regulation of circadian rhythm" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003913 "DNA photolyase activity" evidence=IEA]
InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 GO:GO:0007623 GO:GO:0006281
GO:GO:0042752 GO:GO:0000122 GO:GO:0003690 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 OMA:FDTDGLP GO:GO:0000988
EMBL:DAAA02013749 EMBL:DAAA02013752 EMBL:DAAA02013750
EMBL:DAAA02013751 IPI:IPI00868590 Ensembl:ENSBTAT00000057061
Uniprot:F1MXB2
Length = 587
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 129/274 (47%), Positives = 177/274 (64%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGIL---HPDEHLVPTMKEMGLDESSIPLCKF 59
+Q L+S +E P P + + + +C L H +++ VP+++E+G D +P +
Sbjct: 153 FQTLISKME--PLEIPVETITSEVIEKCTTPLSDDHDEKYGVPSLEELGFDTDGLPSAVW 210
Query: 60 PGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELK 119
PGGETEAL RLE+ L K WV FE+P NSL S T LSPYL+FGCLS RLFY +L
Sbjct: 211 PGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLT 270
Query: 120 KILA-TGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTNEKYLEAW 178
+ ++ PP+SL GQ+ WREF+Y ++ P FDKM+GN IC Q+ WD N + L W
Sbjct: 271 DLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKW 330
Query: 179 SHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADW 238
+ G+TG+P+IDAIM QLR EGWIHHLARHAVACFLTRGDL++SWEEG V + L L+
Sbjct: 331 AEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVKKHLFLNYRE 390
Query: 239 AMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTDK 272
++N ++ WL+ HQ YSP+ G + ++
Sbjct: 391 SVNLKSFQWLNQPTHQHQVVHEYSPLLMGSRDEE 424
>UNIPROTKB|G4MNA0 [details] [associations]
symbol:MGG_02071 "Cryptochrome-1" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005101 Pfam:PF03441 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 EMBL:CM001231 Gene3D:3.40.50.620
InterPro:IPR014729 KO:K02295 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 RefSeq:XP_003708836.1 EnsemblFungi:MGG_02071T0
GeneID:2681226 KEGG:mgr:MGG_02071 Uniprot:G4MNA0
Length = 679
Score = 397 (144.8 bits), Expect = 5.1e-57, Sum P(2) = 5.1e-57
Identities = 69/107 (64%), Positives = 84/107 (78%)
Query: 165 QVDWDTNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEE 224
+VD + E + W G+TG+P+IDA+MRQLR+EGWIHHL RH+VACFLTRG Y+SWE
Sbjct: 377 EVDSEQAESWFRRWEAGQTGFPWIDALMRQLRVEGWIHHLGRHSVACFLTRGGCYVSWER 436
Query: 225 GQSVFEELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
G VFEELLLD + A NAGNW WLS +AFF Q+FR YSP++FGKK D
Sbjct: 437 GLDVFEELLLDHEPACNAGNWQWLSCTAFFSQYFRCYSPISFGKKWD 483
Score = 219 (82.2 bits), Expect = 5.1e-57, Sum P(2) = 5.1e-57
Identities = 50/136 (36%), Positives = 77/136 (56%)
Query: 41 VPTMKEMGLDESSIPLCKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEP-STTV 99
+ T++E+G ++ P + GGE+ AL+ L+ + N+ + F KP T+P + EP STT+
Sbjct: 223 IETLEELGYPPATTP---YKGGESLALRELDAIIENQVYTATFRKPQTSPAAFEPQSTTL 279
Query: 100 LSPYLKFGCLSVRLFYHELKKILATGPHAK------PPVSLLGQIYWREFYYVVGSDT-P 152
LSP + FG LSVRLFYH ++ + AK PP SL GQ+ +R+ Y+ + P
Sbjct: 280 LSPAMHFGSLSVRLFYHRVQDTVDAYNQAKKKGASLPPESLTGQLLFRDMYFAAQAAIGP 339
Query: 153 NFDKMKGNKICCQVDW 168
F + GN C + W
Sbjct: 340 CFSQTAGNAHCRFIPW 355
Score = 161 (61.7 bits), Expect = 7.0e-29, Sum P(2) = 7.0e-29
Identities = 41/96 (42%), Positives = 54/96 (56%)
Query: 222 WEEGQSVFEELLLDADWA-MNAGNWMW-LSASAFFHQFFRVYSPVAFGKKTDKFE-LLLD 278
WE GQ+ F +DA + W+ L + R V++ + D FE LLLD
Sbjct: 390 WEAGQTGFP--WIDALMRQLRVEGWIHHLGRHSVACFLTRGGCYVSWERGLDVFEELLLD 447
Query: 279 ADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
+ A NAGNW WLS +AFF Q+FR YSP++FGKK D
Sbjct: 448 HEPACNAGNWQWLSCTAFFSQYFRCYSPISFGKKWD 483
>FB|FBgn0025680 [details] [associations]
symbol:cry "cryptochrome" species:7227 "Drosophila
melanogaster" [GO:0007623 "circadian rhythm"
evidence=IGI;IEP;IMP;NAS;TAS;IPI] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] [GO:0003913 "DNA photolyase
activity" evidence=ISS;IMP] [GO:0009785 "blue light signaling
pathway" evidence=IMP] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IMP;IDA] [GO:0008020 "G-protein coupled
photoreceptor activity" evidence=ISS] [GO:0009588 "UV-A, blue light
phototransduction" evidence=ISS] [GO:0009881 "photoreceptor
activity" evidence=IMP;NAS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043234 "protein complex"
evidence=IPI] [GO:0005641 "nuclear envelope lumen" evidence=IDA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP;TAS] [GO:0009649 "entrainment of circadian clock"
evidence=IDA;IMP] [GO:0042332 "gravitaxis" evidence=IMP]
[GO:0009637 "response to blue light" evidence=NAS;TAS] [GO:0006281
"DNA repair" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0042752 "regulation of circadian rhythm" evidence=IMP;IDA]
[GO:0045475 "locomotor rhythm" evidence=IMP] [GO:0007602
"phototransduction" evidence=IMP] [GO:0050980 "detection of light
stimulus involved in magnetoreception" evidence=IMP] [GO:0071000
"response to magnetism" evidence=IMP] [GO:0050958
"magnetoreception" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 EMBL:AE014297 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0043234 GO:GO:0050660
GO:GO:0006281 GO:GO:0006351 GO:GO:0005641 GO:GO:0000060
GO:GO:0045475 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0007602 GO:GO:0043153 eggNOG:COG0415 KO:K02295 OMA:QMFLHTV
OrthoDB:EOG437PW2 GO:GO:0009882 SUPFAM:SSF52425 SUPFAM:SSF48173
PROSITE:PS51645 EMBL:AF099734 EMBL:AB018400 EMBL:AB019389
EMBL:AY051514 RefSeq:NP_732407.1 UniGene:Dm.4579 PDB:4GU5
PDBsum:4GU5 ProteinModelPortal:O77059 SMR:O77059 DIP:DIP-29424N
IntAct:O77059 MINT:MINT-1328097 STRING:O77059 PaxDb:O77059
PRIDE:O77059 EnsemblMetazoa:FBtr0083736 GeneID:42305
KEGG:dme:Dmel_CG3772 UCSC:CG3772-RA FlyBase:FBgn0025680
GeneTree:ENSGT00500000044813 InParanoid:O77059 PhylomeDB:O77059
GenomeRNAi:42305 NextBio:828142 Bgee:O77059 GO:GO:0050980
GO:GO:0042332 GO:GO:0071000 Uniprot:O77059
Length = 542
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 99/224 (44%), Positives = 135/224 (60%)
Query: 61 GGETEALKRLEKSLANKE--WVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFY--- 115
GGET+AL L++ L ++ + R F PN A ++ S +S +L+FGCLSVR FY
Sbjct: 225 GGETQALLLLDERLKVEQHAFERGFYLPNQALPNIHDSPKSMSAHLRFGCLSVRRFYWSV 284
Query: 116 HELKKIL-----ATGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDW-D 169
H+L K + G + GQ+ WRE++Y + + PN+D+M+GN IC + W
Sbjct: 285 HDLFKNVQLRACVRGVQMTGGAHITGQLIWREYFYTMSVNNPNYDRMEGNDICLSIPWAK 344
Query: 170 TNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVF 229
NE L++W G+TG+P ID MRQL EGW+HH R+ VA FLTRG L+ SWE G F
Sbjct: 345 PNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHF 404
Query: 230 EELLLDADWAMNAGNWMWLSASAFFHQFFR--VYSPVAFGKKTD 271
+ LLDADW++ AGNWMW+S+SAF V PVA K+ D
Sbjct: 405 LKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAKRLD 448
>UNIPROTKB|Q293P8 [details] [associations]
symbol:cry "Cryptochrome-1" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005641 "nuclear envelope lumen" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0009785 "blue light
signaling pathway" evidence=ISS] [GO:0009882 "blue light
photoreceptor activity" evidence=ISS] [GO:0042752 "regulation of
circadian rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737 GO:GO:0048471
GO:GO:0045892 GO:GO:0050660 GO:GO:0006281 GO:GO:0006351
GO:GO:0005641 GO:GO:0042752 GO:GO:0048511 GO:GO:0000060
EMBL:CM000070 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
GenomeReviews:CM000070_GR eggNOG:COG0415 KO:K02295
OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 RefSeq:XP_001360014.2
GeneID:4803241 KEGG:dpo:Dpse_GA17677 FlyBase:FBgn0077687
InParanoid:Q293P8 Uniprot:Q293P8
Length = 540
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 98/224 (43%), Positives = 137/224 (61%)
Query: 61 GGETEALKRLEKSLA--NKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFY--- 115
GGET+AL LE+ L + R + PN A +++ + +S +L+FGCLSVR FY
Sbjct: 225 GGETQALALLEERLKVERNAFERGYYLPNQANPNIQEAPKSMSAHLRFGCLSVRRFYWSV 284
Query: 116 HEL-KKI-LAT---GPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDW-D 169
H+L + + LA G + + GQ+ WRE++Y + + PN+D+M+GN+IC + W
Sbjct: 285 HDLFENVQLAACVRGVQIEGGAHITGQLIWREYFYTMSVNNPNYDRMEGNEICLTIPWAK 344
Query: 170 TNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVF 229
+E L+ W G+TG+P ID MRQL EGW+HH R+ VA FLTRG L+ SWE G F
Sbjct: 345 PDENLLQRWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEPGLKHF 404
Query: 230 EELLLDADWAMNAGNWMWLSASAFFHQFFR--VYSPVAFGKKTD 271
+ LLDADW++ AGNWMW+S+SAF V PVA K+ D
Sbjct: 405 LKYLLDADWSVCAGNWMWVSSSAFERLLDSSLVTCPVALAKRLD 448
>UNIPROTKB|Q17DK5 [details] [associations]
symbol:cry "Cryptochrome-1" species:7159 "Aedes aegypti"
[GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:CH477293 RefSeq:XP_001648498.1 UniGene:Aae.11304 STRING:Q17DK5
EnsemblMetazoa:AAEL004146-RA GeneID:5564182
KEGG:aag:AaeL_AAEL004146 VectorBase:AAEL004146 eggNOG:COG0415
HOGENOM:HOG000245622 KO:K02295 OMA:QMFLHTV OrthoDB:EOG437PW2
PhylomeDB:Q17DK5 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 Uniprot:Q17DK5
Length = 545
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 94/222 (42%), Positives = 136/222 (61%)
Query: 61 GGETEALKRLEKSLANKE--WVRKFEKPNTA-PNSLEPSTTVLSPYLKFGCLSVRLFY-- 115
GGET+AL+ L L +E ++ + P A P L P T+ +S L+FGCLSVR+FY
Sbjct: 224 GGETKALECLGHRLKQEEEAFLGGYFLPTQAKPEFLVPPTS-MSAALRFGCLSVRMFYWC 282
Query: 116 -HEL-KKILATGPHAKPPVS-LLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDW-DTN 171
H+L +K+ A + P + GQ+ WRE++Y + P++ +M+ N IC + W +
Sbjct: 283 VHDLYEKVQANNQYRNPGGQHITGQLIWREYFYTMSVHNPHYAEMEANPICLNIPWYEPK 342
Query: 172 EKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEE 231
+ L+ W G+TG+P IDA MRQL EGW+HH+ R+ A FLTRG L++SWE G F +
Sbjct: 343 DDSLDRWKEGRTGFPMIDAAMRQLLAEGWLHHILRNITATFLTRGALWISWEAGVQHFLK 402
Query: 232 LLLDADWAMNAGNWMWLSASAF--FHQFFRVYSPVAFGKKTD 271
LLDADW++ AGNWMW+S+SAF SP+A ++ D
Sbjct: 403 YLLDADWSVCAGNWMWVSSSAFEKLLDSSSCTSPIALARRLD 444
Score = 108 (43.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 46/149 (30%), Positives = 74/149 (49%)
Query: 1 MTYQKLVSVLESLPKPKPADDAPT-------SLPRE-CQGI-LHPDEHLVPTMKEMGL-- 49
+TYQ + ++ + KP AP+ S+P Q + L +L P ++ G+
Sbjct: 154 LTYQMFLHTVDIIGKPPRPVAAPSFEFVEFGSIPSILAQEVKLQQVRNLSP--EDFGIYY 211
Query: 50 -DESSIPLCKFPGGETEALKRLEKSLANKE--WVRKFEKPNTA-PNSLEPSTTVLSPYLK 105
I ++ GGET+AL+ L L +E ++ + P A P L P T+ +S L+
Sbjct: 212 EGNPDISHQQWMGGETKALECLGHRLKQEEEAFLGGYFLPTQAKPEFLVPPTS-MSAALR 270
Query: 106 FGCLSVRLFY---HEL-KKILATGPHAKP 130
FGCLSVR+FY H+L +K+ A + P
Sbjct: 271 FGCLSVRMFYWCVHDLYEKVQANNQYRNP 299
Score = 104 (41.7 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 222 WEEGQSVFEELLLDADWA-MNAGNWMWLSASAFFHQFF-RVYSPVAFGKKTDKF-ELLLD 278
W+EG++ F ++DA + A W+ F R +++ F + LLD
Sbjct: 349 WKEGRTGFP--MIDAAMRQLLAEGWLHHILRNITATFLTRGALWISWEAGVQHFLKYLLD 406
Query: 279 ADWAMNAGNWMWLSASAF--FHQFFRVYSPVAFGKKTD 314
ADW++ AGNWMW+S+SAF SP+A ++ D
Sbjct: 407 ADWSVCAGNWMWVSSSAFEKLLDSSSCTSPIALARRLD 444
>UNIPROTKB|Q7PYI7 [details] [associations]
symbol:Cry1 "Cryptochrome-1" species:7165 "Anopheles
gambiae" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005641
"nuclear envelope lumen" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0009785 "blue light signaling pathway"
evidence=ISS] [GO:0009882 "blue light photoreceptor activity"
evidence=ISS] [GO:0042752 "regulation of circadian rhythm"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 GO:GO:0005737
GO:GO:0048471 GO:GO:0045892 GO:GO:0050660 GO:GO:0006281
GO:GO:0006351 GO:GO:0005641 GO:GO:0042752 GO:GO:0048511
GO:GO:0000060 EMBL:AAAB01008987 GO:GO:0018298 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 HOGENOM:HOG000245622 KO:K02295
OMA:QMFLHTV OrthoDB:EOG437PW2 GO:GO:0009882 GO:GO:0003913
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 EMBL:DQ219482
RefSeq:XP_321104.4 ProteinModelPortal:Q7PYI7 STRING:Q7PYI7
EnsemblMetazoa:AGAP001958-RA GeneID:1281165
KEGG:aga:AgaP_AGAP001958 VectorBase:AGAP001958 CTD:1281165
InParanoid:Q0QW08 PhylomeDB:Q7PYI7 Uniprot:Q7PYI7
Length = 545
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 98/245 (40%), Positives = 141/245 (57%)
Query: 41 VPTMKEMGLD---ESSIPLCKFPGGETEALKRLEKSLANKEWVRK--FEKPNTA-PNSLE 94
+P + G+ + I K+ GGET AL+ L L +E + + P A P L
Sbjct: 202 MPAPDDFGIHYDGNARIAFQKWIGGETRALEALGARLKQEEEAFREGYYLPTQAKPEILG 261
Query: 95 PSTTVLSPYLKFGCLSVRLFY---HELKKILATGPHAKPPVS--LLGQIYWREFYYVVGS 149
P+T+ +S L+FGCLSVR+FY H+L + + K P + GQ+ WRE++Y +
Sbjct: 262 PATS-MSAALRFGCLSVRMFYWCVHDLFAKVQSNSQFKYPGGHHITGQLIWREYFYTMSV 320
Query: 150 DTPNFDKMKGNKICCQVDW-DTNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHA 208
P++ +M+ N IC + W + L W G+TG+P IDA MRQL EGW+HH+ R+
Sbjct: 321 QNPHYGEMERNPICLNIPWYKPEDDSLTRWKEGRTGFPMIDAAMRQLLAEGWLHHILRNI 380
Query: 209 VACFLTRGDLYLSWEEGQSVFEELLLDADWAMNAGNWMWLSASAFFHQF--FRVYSPVAF 266
A FLTRG L+LSWEEG F + LLDADW++ AGNWMW+S+SAF + P+A
Sbjct: 381 TATFLTRGGLWLSWEEGLQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSSKCTCPIAL 440
Query: 267 GKKTD 271
++ D
Sbjct: 441 ARRLD 445
>UNIPROTKB|B0WRR9 [details] [associations]
symbol:cry "Cryptochrome-1" species:7176 "Culex
quinquefasciatus" [GO:0000060 "protein import into nucleus,
translocation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005641 "nuclear envelope lumen" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0009785 "blue light signaling
pathway" evidence=ISS] [GO:0009882 "blue light photoreceptor
activity" evidence=ISS] [GO:0042752 "regulation of circadian
rhythm" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 GO:GO:0005737 GO:GO:0048471 GO:GO:0045892
GO:GO:0050660 GO:GO:0006281 GO:GO:0006351 GO:GO:0005641
GO:GO:0042752 GO:GO:0048511 GO:GO:0000060 GO:GO:0018298
eggNOG:COG0415 KO:K02295 OrthoDB:EOG437PW2 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF48173 EMBL:DS232059 RefSeq:XP_001851403.1
UniGene:Cpi.12243 EnsemblMetazoa:CPIJ009455-RA GeneID:6042266
KEGG:cqu:CpipJ_CPIJ009455 VectorBase:CPIJ009455 PhylomeDB:B0WRR9
Uniprot:B0WRR9
Length = 499
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 95/244 (38%), Positives = 141/244 (57%)
Query: 42 PTMKEMGL---DESSIPLCKFPGGETEALKRLEKSLANKEWVRK--FEKPNTA-PNSLEP 95
P ++ G+ + I ++ GGE +AL+ L + L +E + + P A P+ L P
Sbjct: 156 PVPEDFGIYYEGNADIARQRWTGGEAKALELLGRRLKQEEEAFREGYYLPTQARPDFLAP 215
Query: 96 STTVLSPYLKFGCLSVRLFY---HELKKILATGPHAKPPVS--LLGQIYWREFYYVVGSD 150
++ +S L+FGCLSVR+FY H+L + K P + GQ+ WRE++Y +
Sbjct: 216 PSS-MSAALRFGCLSVRMFYWCVHDLFARVQANNQLKHPGGHHITGQLIWREYFYTMSVH 274
Query: 151 TPNFDKMKGNKICCQVDW-DTNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAV 209
P++ M+ N IC + W + + L+ W G+TG+P IDA MRQL EGW+HH+ R+
Sbjct: 275 NPHYAVMELNPICLNIPWYEAKDDSLDRWKEGRTGFPLIDAAMRQLMAEGWLHHILRNIT 334
Query: 210 ACFLTRGDLYLSWEEGQSVFEELLLDADWAMNAGNWMWLSASAF--FHQFFRVYSPVAFG 267
A FLTRG L++SWE G F + LLDADW++ AGNWMW+S+SAF SPVA
Sbjct: 335 ATFLTRGGLWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSSAFEKLLDSSSCTSPVALA 394
Query: 268 KKTD 271
++ D
Sbjct: 395 RRLD 398
>UNIPROTKB|Q7T3R1 [details] [associations]
symbol:LOC395100 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] InterPro:IPR005101
Pfam:PF03441 GO:GO:0006281 GO:GO:0003913 SUPFAM:SSF48173
GeneTree:ENSGT00500000044813 HSSP:P00914 EMBL:AADN02063941
UniGene:Gga.5544 EMBL:AY102068 IPI:IPI00821473
Ensembl:ENSGALT00000040670 HOGENOM:HOG000202408 InParanoid:Q7T3R1
Uniprot:Q7T3R1
Length = 140
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 71/104 (68%), Positives = 86/104 (82%)
Query: 168 WDTNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQS 227
W + + L W +TG+P+IDAIM QLR EGWIHHLARHA ACFLTRGDL++SWEEG
Sbjct: 2 WYEDAERLHKWKTAQTGFPWIDAIMTQLRQEGWIHHLARHAAACFLTRGDLWISWEEGMK 61
Query: 228 VFEELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 271
VFEELLLDAD+++NAGNWMWLSASAFFH + R++ PV FG++TD
Sbjct: 62 VFEELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTD 105
Score = 174 (66.3 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 29/41 (70%), Positives = 37/41 (90%)
Query: 274 ELLLDADWAMNAGNWMWLSASAFFHQFFRVYSPVAFGKKTD 314
ELLLDAD+++NAGNWMWLSASAFFH + R++ PV FG++TD
Sbjct: 65 ELLLDADYSINAGNWMWLSASAFFHHYTRIFCPVRFGRRTD 105
>ZFIN|ZDB-GENE-040617-2 [details] [associations]
symbol:cry-dash "cryptochrome DASH" species:7955
"Danio rerio" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IDA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IDA] [GO:0000719 "photoreactive repair"
evidence=IDA] [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 ZFIN:ZDB-GENE-040617-2 GO:GO:0050660 GO:GO:0003684
GO:GO:0000719 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 GO:GO:0003904
InterPro:IPR014133 TIGRFAMs:TIGR02765 EMBL:BX247944 IPI:IPI00495554
Ensembl:ENSDART00000139329 ArrayExpress:F1R5N7 Bgee:F1R5N7
Uniprot:F1R5N7
Length = 521
Score = 306 (112.8 bits), Expect = 9.7e-30, Sum P(2) = 9.7e-30
Identities = 80/250 (32%), Positives = 125/250 (50%)
Query: 3 YQKLVSVLESLPKPKPADDAPTSLPRECQGILHPDEHLVPTMKEMGLDESSIPLCK--FP 60
Y + +E+ + +P P + G+ +E +PT +G E + C+ FP
Sbjct: 160 YTQFRKAVEAQGRVRPVLSTPEQVKSPPSGL---EEGPIPTFDSLGQTEP-LDDCRSAFP 215
Query: 61 --GGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHEL 118
GGETEAL RL+ + V +++ ++ ST SP+L GC+S R Y ++
Sbjct: 216 CRGGETEALARLKHYFWDTNAVATYKETRNGMIGVDFSTK-FSPWLALGCISPRYIYEQI 274
Query: 119 KKILATGPHAKPPVSLLGQIYWREFYYVVGSDTPN-FDKMKGNKICCQVDWDTNEKYLEA 177
KK + ++ ++ WR+++ V N M G + V W+T+ K +A
Sbjct: 275 KKYEVERTANQSTYWVIFELLWRDYFKFVALKYGNRIFYMNGLQDK-HVPWNTDMKMFDA 333
Query: 178 WSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDAD 237
W G+TG PF+DA MR+L L G++ + R VA FLT+ DL L W G FE LL+D D
Sbjct: 334 WKEGRTGVPFVDANMRELALTGFMSNRGRQNVASFLTK-DLGLDWRLGAEWFEYLLVDHD 392
Query: 238 WAMNAGNWMW 247
N GNW++
Sbjct: 393 VCSNYGNWLY 402
Score = 48 (22.0 bits), Expect = 9.7e-30, Sum P(2) = 9.7e-30
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 273 FE-LLLDADWAMNAGNWMW 290
FE LL+D D N GNW++
Sbjct: 384 FEYLLVDHDVCSNYGNWLY 402
>UNIPROTKB|Q9KNA8 [details] [associations]
symbol:phrA "Deoxyribodipyrimidine photo-lyase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 320 (117.7 bits), Expect = 9.5e-29, P = 9.5e-29
Identities = 71/198 (35%), Positives = 109/198 (55%)
Query: 77 KEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELKKILATGPHAKPPVSLLG 136
+E V+ + + P T+ LSPYL G LS R L + G ++ L
Sbjct: 218 RERVQDYHQARDFP--AREGTSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLS 275
Query: 137 QIYWREFYYVVGSDTPNFDKMKGN-KICCQVDW-DTNEKYLEAWSHGKTGYPFIDAIMRQ 194
++ WREFY + + PN K + + +++W + NEK+ + W GKTGYP +DA MRQ
Sbjct: 276 ELIWREFYQHLVAIEPNLSKSRDFVEWGARLEWWNDNEKF-QLWCEGKTGYPIVDAAMRQ 334
Query: 195 LRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADWAMNAGNWMWLSASAFF 254
L GW+H+ R VA FLT+ DL++ W G+ F L+D D+A N G W W +++
Sbjct: 335 LNQTGWMHNRLRMIVASFLTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCD 393
Query: 255 HQ-FFRVYSPVAFGKKTD 271
Q +FR+++PV+ G+K D
Sbjct: 394 GQPYFRIFNPVSQGEKFD 411
>TIGR_CMR|VC_A0057 [details] [associations]
symbol:VC_A0057 "deoxyribodipyrimidine photolyase,
cyclobutane pyrimidine dimer-specific" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003904 "deoxyribodipyrimidine photo-lyase
activity" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 PROSITE:PS00691
InterPro:IPR006050 Pfam:PF00875 GO:GO:0003677 GO:GO:0006281
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 OMA:CKVDFWL
KO:K01669 GO:GO:0003904 PIR:G82505 RefSeq:NP_232458.1
ProteinModelPortal:Q9KNA8 DNASU:2612142 GeneID:2612142
KEGG:vch:VCA0057 PATRIC:20084701 ProtClustDB:CLSK869480
Uniprot:Q9KNA8
Length = 469
Score = 320 (117.7 bits), Expect = 9.5e-29, P = 9.5e-29
Identities = 71/198 (35%), Positives = 109/198 (55%)
Query: 77 KEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELKKILATGPHAKPPVSLLG 136
+E V+ + + P T+ LSPYL G LS R L + G ++ L
Sbjct: 218 RERVQDYHQARDFP--AREGTSSLSPYLAIGVLSARQCVARLYHESSMGELSEGAQVWLS 275
Query: 137 QIYWREFYYVVGSDTPNFDKMKGN-KICCQVDW-DTNEKYLEAWSHGKTGYPFIDAIMRQ 194
++ WREFY + + PN K + + +++W + NEK+ + W GKTGYP +DA MRQ
Sbjct: 276 ELIWREFYQHLVAIEPNLSKSRDFVEWGARLEWWNDNEKF-QLWCEGKTGYPIVDAAMRQ 334
Query: 195 LRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADWAMNAGNWMWLSASAFF 254
L GW+H+ R VA FLT+ DL++ W G+ F L+D D+A N G W W +++
Sbjct: 335 LNQTGWMHNRLRMIVASFLTK-DLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCD 393
Query: 255 HQ-FFRVYSPVAFGKKTD 271
Q +FR+++PV+ G+K D
Sbjct: 394 GQPYFRIFNPVSQGEKFD 411
>TIGR_CMR|BA_3180 [details] [associations]
symbol:BA_3180 "deoxyribodipyrimidine photolyase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 InterPro:IPR006050
Pfam:PF00875 EMBL:AE016879 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 RefSeq:NP_845490.2
RefSeq:YP_029213.1 ProteinModelPortal:Q81NL2 DNASU:1086563
EnsemblBacteria:EBBACT00000013148 EnsemblBacteria:EBBACT00000022838
GeneID:1086563 GeneID:2852147 KEGG:ban:BA_3180 KEGG:bat:BAS2956
PATRIC:18783980 ProtClustDB:CLSK584502
BioCyc:BANT260799:GJAJ-3018-MONOMER Uniprot:Q81NL2
Length = 476
Score = 314 (115.6 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 85/239 (35%), Positives = 124/239 (51%)
Query: 39 HLVPTMKEMGLDESSIPLCKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTT 98
HL+PT+ ES + E A K ++ ++K + + + PN + + +
Sbjct: 182 HLLPTIPWTSHMESI-----WEPTEEGAYKTWKEFFSSK--LASYSEGRDFPN--QNAHS 232
Query: 99 VLSPYLKFGCLSVRLFYHEL-KKILAT--GPHAKPPVSLLGQIYWREFYYVVGSDTPNFD 155
+L+PYL FG +SV+L YH L K + K S + Q+ WREF Y + P F
Sbjct: 233 MLAPYLSFGQISVKLIYHYLINKSTESQCSLFEKQVNSFIRQLIWREFSYYLLYHYP-FT 291
Query: 156 KMKG-NKICCQVDWDTNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLT 214
K NK W+ E+ L W G TGYPFIDA MR+L G++H+ R AVA FL
Sbjct: 292 AYKPLNKSFEHFPWNNEEELLRVWQKGDTGYPFIDAGMRELWQTGFMHNRTRMAVASFLV 351
Query: 215 RGDLYLSWEEGQSVFEELLLDADWAMNAGNWMWLSAS-AFFHQFFRVYSPVAFGKKTDK 272
+ L + W+EG F + LLDAD A N W W++ S A +FR+++P+ G+K DK
Sbjct: 352 K-HLLIPWQEGAKWFMDTLLDADIANNTMGWQWVAGSGADASPYFRIFNPITQGEKFDK 409
>ASPGD|ASPL0000053661 [details] [associations]
symbol:cryA species:162425 "Emericella nidulans"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0000719
"photoreactive repair" evidence=IGI] [GO:0070797 "negative
regulation of cleistothecium development" evidence=IMP] [GO:0071483
"cellular response to blue light" evidence=IMP] [GO:0071492
"cellular response to UV-A" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0070791 "cleistothecium
development" evidence=IMP] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:BN001308
GO:GO:0006281 EMBL:AACD01000007 Gene3D:3.40.50.620
InterPro:IPR014729 eggNOG:COG0415 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 OrthoDB:EOG4XPTQ3
RefSeq:XP_657991.1 ProteinModelPortal:Q5BGE3 STRING:Q5BGE3
EnsemblFungi:CADANIAT00002312 GeneID:2876167 KEGG:ani:AN0387.2
OMA:HMAPRQA Uniprot:Q5BGE3
Length = 567
Score = 308 (113.5 bits), Expect = 7.6e-27, P = 7.6e-27
Identities = 77/219 (35%), Positives = 113/219 (51%)
Query: 59 FPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTV-LSPYLKFGCLSVRLFYHE 117
FP GE E L+RLE E++ K + N L TT LSPY G LS R +
Sbjct: 294 FPAGEHEGLRRLE------EFLEKATAYDDERNFLSGETTSKLSPYFASGSLSARTAVAK 347
Query: 118 LKKILATGPHAKPP---VSLLGQIYWREFYYVVGSDTPNFDKMKGNKI-CCQVDWDTNEK 173
++ A G ++ +S + ++ WR+FY V P K K +DW N
Sbjct: 348 AREANA-GKISRGEAGYISWISEVAWRDFYKHVLVHWPFICMNKCFKFEFTNIDWSYNNT 406
Query: 174 YLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELL 233
+ EAW+ GKTGYP +DA MRQL W+H+ R V+ FL + DL + W G+ F E L
Sbjct: 407 HFEAWAAGKTGYPLVDAAMRQLHATAWMHNRCRMVVSSFLCK-DLLIDWRRGERYFMEHL 465
Query: 234 LDADWAMNAGNWMWLSASAFFHQ-FFRVYSPVAFGKKTD 271
+D D+A N G W + S++ Q +FR+++P+ ++ D
Sbjct: 466 IDGDFASNHGGWGFGSSTGVDPQPYFRIFNPIRQSERFD 504
>TIGR_CMR|SO_3384 [details] [associations]
symbol:SO_3384 "deoxyribodipyrimidine photolyase"
species:211586 "Shewanella oneidensis MR-1" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 KO:K01669 GO:GO:0003904
HSSP:P00914 RefSeq:NP_718938.1 ProteinModelPortal:Q8EBW1
GeneID:1171062 KEGG:son:SO_3384 PATRIC:23526448 OMA:WISELAW
ProtClustDB:CLSK907140 Uniprot:Q8EBW1
Length = 512
Score = 301 (111.0 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 75/220 (34%), Positives = 112/220 (50%)
Query: 58 KFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHE 117
++ GE +A + L + + K V+ +++ P +++ T+V+SPYL G LS R
Sbjct: 232 QWAAGEGQAKRLLNQFIQQK--VQDYKQDRDFP-AID-GTSVISPYLAIGVLSPRQCVAA 287
Query: 118 LKKIL--ATGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVD---WDTNE 172
L + P + L ++ WREFY + P D KGN Q D W N+
Sbjct: 288 LLQRFPEVIVDDTSPGRTWLNELIWREFYRHLLVAFP--DLSKGNNFNRQADHVLWRNNQ 345
Query: 173 KYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEEL 232
AW GKTGYP +DA MRQL GW+H+ R VA FLT+ L + W G+ F +
Sbjct: 346 SEFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTK-HLLIDWRWGERYFRQH 404
Query: 233 LLDADWAMNAGNWMWLSASAFFHQ-FFRVYSPVAFGKKTD 271
L+D D A N G W W + Q +FR+++P++ +K D
Sbjct: 405 LIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPMSQSEKFD 444
>UNIPROTKB|P00914 [details] [associations]
symbol:phr "deoxyribodipyrimidine photolyase
(photoreactivation)" species:83333 "Escherichia coli K-12"
[GO:0018298 "protein-chromophore linkage" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003904 "deoxyribodipyrimidine
photo-lyase activity" evidence=IEA;IDA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 EMBL:K01299 InterPro:IPR006050 Pfam:PF00875
GO:GO:0000166 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669 GO:GO:0003904
EMBL:X57399 PIR:A01137 RefSeq:NP_415236.1 RefSeq:YP_488988.1
PDB:1DNP PDBsum:1DNP ProteinModelPortal:P00914 SMR:P00914
DIP:DIP-10505N IntAct:P00914 MINT:MINT-1302006 PRIDE:P00914
EnsemblBacteria:EBESCT00000003526 EnsemblBacteria:EBESCT00000003527
EnsemblBacteria:EBESCT00000016976 GeneID:12930926 GeneID:947005
KEGG:ecj:Y75_p0688 KEGG:eco:b0708 PATRIC:32116611 EchoBASE:EB0729
EcoGene:EG10736 ProtClustDB:PRK10674 BioCyc:EcoCyc:EG10736-MONOMER
BioCyc:ECOL316407:JW0698-MONOMER BioCyc:MetaCyc:EG10736-MONOMER
SABIO-RK:P00914 EvolutionaryTrace:P00914 Genevestigator:P00914
Uniprot:P00914
Length = 472
Score = 294 (108.6 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 77/224 (34%), Positives = 112/224 (50%)
Query: 53 SIPLCKFPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVR 112
S FP E A+ +L + N ++E+ P ++E T+ LS L G LS R
Sbjct: 195 SFDTAHFPVEEKAAIAQLRQFCQNG--AGEYEQQRDFP-AVE-GTSRLSASLATGGLSPR 250
Query: 113 LFYHELKKILATGPHAKPPVS---LLGQIYWREFYYVVGSDTPNFDKMKGNKICC-QVDW 168
H L LA P A + L ++ WREFY + + P+ K + +V W
Sbjct: 251 QCLHRL---LAEQPQALDGGAGSVWLNELIWREFYRHLITYHPSLCKHRPFIAWTDRVQW 307
Query: 169 DTNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSV 228
+N +L+AW GKTGYP +DA MRQL GW+H+ R A FL + DL + W EG+
Sbjct: 308 QSNPAHLQAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVK-DLLIDWREGERY 366
Query: 229 FEELLLDADWAMNAGNWMWLSASAF-FHQFFRVYSPVAFGKKTD 271
F L+D D A N G W W +++ +FR+++P G+K D
Sbjct: 367 FMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFD 410
>TIGR_CMR|CBU_1176 [details] [associations]
symbol:CBU_1176 "deoxyribodipyrimidine photolyase - class
I" species:227377 "Coxiella burnetii RSA 493" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:NP_820171.1 HSSP:P00914
ProteinModelPortal:Q83CE4 GeneID:1209079 KEGG:cbu:CBU_1176
PATRIC:17931093 ProtClustDB:CLSK2394345
BioCyc:CBUR227377:GJ7S-1162-MONOMER Uniprot:Q83CE4
Length = 472
Score = 292 (107.8 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 75/216 (34%), Positives = 113/216 (52%)
Query: 62 GETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELKKI 121
GE A L+K + KE ++ + P+ ST+ LSPYL FG +S+R + + +
Sbjct: 198 GEKNAQIVLKKFI--KENLKNYPAHRDRPDI--SSTSHLSPYLHFGEISIRQVWTAITQA 253
Query: 122 LATGPHAKPPVSL-LGQIYWREF-YYVVGSDTPNFDKMKGNKICCQVD---WDTNEKYLE 176
+ + + L Q+ WREF YY++ +F +M + Q D W N+ +L
Sbjct: 254 TIQDKNLQKAADVFLRQLIWREFAYYLLW----HFPQMGRSNFRNQFDNFKWKKNKNWLR 309
Query: 177 AWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDA 236
AW G TGYP +DA MR+L G++H+ R VA FL + DL + W EG+ F LLDA
Sbjct: 310 AWQKGLTGYPIVDAGMRELWCTGYMHNRVRMIVASFLVK-DLMIDWREGEKWFWNTLLDA 368
Query: 237 DWAMNAGNWMWLSASA-FFHQFFRVYSPVAFGKKTD 271
D A NA W W++ +FR+++P+ KK D
Sbjct: 369 DLANNALGWQWIAGCGPDAAPYFRIFNPILQSKKFD 404
>UNIPROTKB|Q48MU1 [details] [associations]
symbol:phrB "Deoxyribodipyrimidine photolyase"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003904 "deoxyribodipyrimidine photo-lyase activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394 InterPro:IPR006050
Pfam:PF00875 GO:GO:0006281 GO:GO:0018298 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:3.40.50.620 InterPro:IPR014729
eggNOG:COG0415 SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621
OMA:CKVDFWL KO:K01669 GO:GO:0003904 RefSeq:YP_273281.1
ProteinModelPortal:Q48MU1 STRING:Q48MU1 GeneID:3555718
KEGG:psp:PSPPH_1010 PATRIC:19971112 ProtClustDB:CLSK868818
Uniprot:Q48MU1
Length = 482
Score = 264 (98.0 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 70/220 (31%), Positives = 111/220 (50%)
Query: 59 FPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHEL 118
+P GE EA +R+ + A+ + + ++ P +P T+ LS YL G +S R H
Sbjct: 202 WPAGEAEARRRMA-TFADAQ-ISYYKTERDFP--AKPGTSQLSAYLAAGVISPRQCLHAA 257
Query: 119 ----KKILATGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQ-VDW-DTNE 172
+ TG V+ + ++ WREFY P + + + + + W D E
Sbjct: 258 LGSNQGEFETGDVGT--VTWINELLWREFYKHTLVGYPRVSRHRAFRPETEALKWRDAPE 315
Query: 173 KYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEEL 232
+ L AW +TG P IDA MRQL GW+H+ R VA FLT+ +L + W EG+ F
Sbjct: 316 ELL-AWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTK-NLLIDWHEGERFFMRH 373
Query: 233 LLDADWAMNAGNWMWLSASAFFHQ-FFRVYSPVAFGKKTD 271
L+D D A N G W W S++ +FR+++P++ ++ D
Sbjct: 374 LIDGDLASNNGGWQWSSSTGTDSAPYFRIFNPLSQSERFD 413
>TIGR_CMR|CPS_1380 [details] [associations]
symbol:CPS_1380 "deoxyribodipyrimidine photolyase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0006281 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:GDLANNQ
KO:K01669 GO:GO:0003904 RefSeq:YP_268123.1
ProteinModelPortal:Q485Z2 STRING:Q485Z2 GeneID:3520518
KEGG:cps:CPS_1380 PATRIC:21465975 ProtClustDB:CLSK715243
BioCyc:CPSY167879:GI48-1461-MONOMER Uniprot:Q485Z2
Length = 470
Score = 261 (96.9 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 61/181 (33%), Positives = 94/181 (51%)
Query: 97 TTVLSPYLKFGCLS----VRLFYHELKKILATGPHAKPPVSLLGQIYWREFYYVVGSDTP 152
T+ +SPYL G +S +RL ++ +L + S L +I WREFY +
Sbjct: 237 TSGISPYLAAGVISPRFVLRLLLNKHPDLLVASDSEE--FSWLNEIIWREFYRHLLFHEQ 294
Query: 153 NFDKMKGNKICCQ-VDWDTNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVAC 211
K + K Q + W + +AW G+TGYP +DA MRQL GW+H+ R VA
Sbjct: 295 RLCKHQCYKENYQEMLWHNDAALFDAWCQGRTGYPLVDAAMRQLNQTGWMHNRLRMVVAS 354
Query: 212 FLTRGDLYLSWEEGQSVFEELLLDADWAMNAGNWMWLSASAFFHQ-FFRVYSPVAFGKKT 270
FLT+ L + W G+ F + L+D D A N G W W +++ Q +FR+++P+ ++
Sbjct: 355 FLTK-HLLIDWRLGEKYFMQHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPIRQSERF 413
Query: 271 D 271
D
Sbjct: 414 D 414
>TIGR_CMR|SPO_1917 [details] [associations]
symbol:SPO_1917 "deoxyribodipyrimidine photolyase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 InterPro:IPR006050 Pfam:PF00875 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0018298
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF52425
SUPFAM:SSF48173 HOGENOM:HOG000245621 OMA:CKVDFWL KO:K01669
GO:GO:0003904 RefSeq:YP_167152.1 ProteinModelPortal:Q5LS53
GeneID:3192692 KEGG:sil:SPO1917 PATRIC:23377163
ProtClustDB:CLSK933677 Uniprot:Q5LS53
Length = 481
Score = 227 (85.0 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 62/213 (29%), Positives = 101/213 (47%)
Query: 62 GETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHELKKI 121
GE AL+RL++ +A + +++ P T+ LS L G + R +H +
Sbjct: 205 GEAAALERLDRFIATG--IGQYDACRDLPAG--DGTSTLSDALSLGEIGPRTLWHRAGEA 260
Query: 122 LATGPHAKPPVSLLGQIYWREFYYVVGSDTPNFDKMKGNKICCQVDWDTN--EKYLEAWS 179
G A+ + L Q+ WR+F Y + TP+ W T+ + AW+
Sbjct: 261 AHKG--AQGAETFLKQLVWRDFAYHLMYHTPHLLSENWRPGWEVFPWATDPADPGFVAWT 318
Query: 180 HGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLLDADWA 239
G+TG P +DA MR++ + G +H+ AR A +LT+ L + W+ G F + L D D A
Sbjct: 319 RGRTGVPLVDAAMREMYVTGRMHNRARMIAASYLTK-HLMVHWKLGMDWFADCLTDWDPA 377
Query: 240 MNAGNWMWLSASA-FFHQFFRVYSPVAFGKKTD 271
NA W W++ +FR+++P KK D
Sbjct: 378 ANAMGWQWVAGCGPDAAPYFRIFNPETQAKKFD 410
>TAIR|locus:2138728 [details] [associations]
symbol:CRY1 "cryptochrome 1" species:3702 "Arabidopsis
thaliana" [GO:0003913 "DNA photolyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=NAS]
[GO:0009637 "response to blue light" evidence=RCA;IMP;NAS]
[GO:0009785 "blue light signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0051510 "regulation of
unidimensional cell growth" evidence=IMP] [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0046777 "protein autophosphorylation"
evidence=RCA;IDA] [GO:0055114 "oxidation-reduction process"
evidence=IMP] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010118 "stomatal movement" evidence=IGI] [GO:0010343 "singlet
oxygen-mediated programmed cell death" evidence=IMP] [GO:0046283
"anthocyanin-containing compound metabolic process" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010075
"regulation of meristem growth" evidence=IGI] [GO:0009583
"detection of light stimulus" evidence=IMP] [GO:0010155 "regulation
of proton transport" evidence=RCA] [GO:0009882 "blue light
photoreceptor activity" evidence=IMP] InterPro:IPR002081
InterPro:IPR005101 InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147
PROSITE:PS00394 PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009414 GO:GO:0006281 GO:GO:0046777
GO:GO:0009640 GO:GO:0010118 GO:GO:0004672 GO:GO:0018298
GO:GO:0055114 EMBL:AL161513 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AF128396 GO:GO:0010075 GO:GO:0046283 GO:GO:0051510
eggNOG:COG0415 GO:GO:0009882 GO:GO:0003913 SUPFAM:SSF52425
SUPFAM:SSF48173 PROSITE:PS51645 EMBL:S66907 EMBL:S66909
EMBL:AF361588 EMBL:AY124863 IPI:IPI00529765 PIR:H85089 PIR:S39058
RefSeq:NP_567341.1 UniGene:At.27730 PDB:1U3C PDB:1U3D PDBsum:1U3C
PDBsum:1U3D DisProt:DP00474 ProteinModelPortal:Q43125 SMR:Q43125
IntAct:Q43125 MINT:MINT-192438 STRING:Q43125 PaxDb:Q43125
PRIDE:Q43125 EnsemblPlants:AT4G08920.1 GeneID:826470
KEGG:ath:AT4G08920 TAIR:At4g08920 HOGENOM:HOG000245621
InParanoid:Q43125 KO:K12118 OMA:CKVDFWL ProtClustDB:CLSN2681786
EvolutionaryTrace:Q43125 Genevestigator:Q43125 GermOnline:AT4G08920
GO:GO:0010617 GO:GO:0009583 GO:GO:0010343 InterPro:IPR020978
InterPro:IPR014134 Pfam:PF12546 TIGRFAMs:TIGR02766 Uniprot:Q43125
Length = 681
Score = 214 (80.4 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 62/186 (33%), Positives = 97/186 (52%)
Query: 96 STTVLSPYLKFGCLSVRLFYH--ELKKILAT--GPHA-KPPVSL-LGQIYWREFYYVVGS 149
+T+ LSP+L FG +SVR +H +K++ G A + V+L L I RE+ +
Sbjct: 246 TTSFLSPHLHFGEVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKSIGLREYSRYISF 305
Query: 150 DTP-NFDK-MKGN-KICCQVDWDTNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLAR 206
+ P + ++ + G+ K W +E Y +AW G+TGYP +DA MR+L GW+H R
Sbjct: 306 NHPYSHERPLLGHLKF---FPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIR 362
Query: 207 HAVACFLTRGDLYLSWEEGQSVFEELLLDADWAMNAGNWMWLSASA-FFHQFFRVYSPVA 265
V+ F + L L W G F + LLDAD +A W +++ + +F R+ +P
Sbjct: 363 VVVSSFFVKV-LQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDRIDNPQF 421
Query: 266 FGKKTD 271
G K D
Sbjct: 422 EGYKFD 427
>TAIR|locus:2018254 [details] [associations]
symbol:CRY2 "cryptochrome 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009882 "blue light photoreceptor activity" evidence=ISS]
[GO:0005773 "vacuole" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IGI] [GO:0010118 "stomatal movement" evidence=IGI]
[GO:0009909 "regulation of flower development" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] [GO:0006338 "chromatin remodeling" evidence=IMP]
[GO:0010617 "circadian regulation of calcium ion oscillation"
evidence=IMP] [GO:0010075 "regulation of meristem growth"
evidence=IGI] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0009416 "response to light stimulus" evidence=IEP] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0009638 "phototropism"
evidence=IGI] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 InterPro:IPR006050 Pfam:PF00875 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0005773
GO:GO:0009414 GO:GO:0006281 GO:GO:0010118 GO:GO:0006338
EMBL:AC000104 GO:GO:0018298 GO:GO:0009911 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0010075 eggNOG:COG0415 GO:GO:0009882
GO:GO:0003913 SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
ProtClustDB:CLSN2681786 GO:GO:0010617 InterPro:IPR014134
TIGRFAMs:TIGR02766 EMBL:U62549 EMBL:U62550 EMBL:X99061 EMBL:U43397
EMBL:AY057440 EMBL:AY057441 EMBL:AY057442 EMBL:EU351967
EMBL:EU351968 EMBL:EU351969 EMBL:EU351970 EMBL:EU351971
EMBL:EU351972 EMBL:EU351973 EMBL:EU351974 EMBL:EU351975
EMBL:EU351976 EMBL:EU351977 EMBL:EU351978 EMBL:EU351979
EMBL:EU351980 EMBL:EU351981 EMBL:EU351982 EMBL:EU351983
EMBL:EU351984 EMBL:EU351985 EMBL:EU351986 EMBL:EU351987
EMBL:EU351988 EMBL:EU351989 EMBL:EU351990 EMBL:EU351991
EMBL:EU351993 EMBL:EU351992 EMBL:EU351994 EMBL:EU351995
EMBL:EU351996 EMBL:EU351997 EMBL:EU351998 EMBL:BT008576
EMBL:BT008648 EMBL:AY576241 EMBL:AY576242 EMBL:AY576243
EMBL:AY576244 EMBL:AY576245 EMBL:AY576246 EMBL:AY576247
EMBL:AY576248 EMBL:AY576249 EMBL:AY576250 EMBL:AY576251
EMBL:AY576252 EMBL:AY576253 EMBL:AY576254 EMBL:AY576255
EMBL:AY576256 EMBL:AY576257 EMBL:AY576258 EMBL:AY576259
EMBL:AY576260 EMBL:AY576261 EMBL:AY576262 EMBL:AY576263
EMBL:AY576264 EMBL:AY576265 EMBL:AY576266 EMBL:AY576267
EMBL:AY576268 EMBL:AY576269 EMBL:AY576270 EMBL:AY576271
EMBL:AK220946 IPI:IPI00528436 PIR:A86176 PIR:S71221
RefSeq:NP_171935.1 RefSeq:NP_849588.1 UniGene:At.21976
ProteinModelPortal:Q96524 SMR:Q96524 DIP:DIP-33589N IntAct:Q96524
MINT:MINT-207946 STRING:Q96524 PaxDb:Q96524 PRIDE:Q96524
EnsemblPlants:AT1G04400.1 EnsemblPlants:AT1G04400.2 GeneID:839529
KEGG:ath:AT1G04400 TAIR:At1g04400 InParanoid:Q96524 KO:K12119
OMA:GDLANNQ PhylomeDB:Q96524 Genevestigator:Q96524
GermOnline:AT1G04400 GO:GO:0009638 Uniprot:Q96524
Length = 612
Score = 209 (78.6 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 60/183 (32%), Positives = 91/183 (49%)
Query: 96 STTVLSPYLKFGCLSVRLFYH--ELKKIL-ATGPHAKPPVS---LLGQIYWREFYYVVGS 149
ST++LSPYL FG +SVR + +K+I+ A +++ S L I RE+ +
Sbjct: 243 STSLLSPYLHFGEISVRHVFQCARMKQIIWARDKNSEGEESADLFLRGIGLREYSRYICF 302
Query: 150 DTPNFDKMKGNKICCQVDWDTNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAV 209
+ P + WD + +AW G+TGYP +DA MR+L GW+H+ R V
Sbjct: 303 NFPFTHEQSLLSHLRFFPWDADVDKFKAWRQGRTGYPLVDAGMRELWATGWMHNRIRVIV 362
Query: 210 ACFLTRGDLYLSWEEGQSVFEELLLDADWAMNAGNWMWLSASA-FFHQFFRVYSPVAFGK 268
+ F + L L W+ G F + LLDAD + W ++S S H+ R+ +P G
Sbjct: 363 SSFAVKF-LLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDRLDNPALQGA 421
Query: 269 KTD 271
K D
Sbjct: 422 KYD 424
>SGD|S000005913 [details] [associations]
symbol:PHR1 "DNA photolyase involved in photoreactivation"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0003729 "mRNA binding" evidence=IDA]
[GO:0000719 "photoreactive repair" evidence=TAS] [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=IEA;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;TAS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0018298
"protein-chromophore linkage" evidence=IEA] [GO:0003913 "DNA
photolyase activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR002081 InterPro:IPR005101
InterPro:IPR018394 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
PROSITE:PS00691 SGD:S000005913 InterPro:IPR006050 Pfam:PF00875
GO:GO:0005739 GO:GO:0005634 EMBL:BK006948 GO:GO:0000166
GO:GO:0003677 GO:GO:0003729 GO:GO:0018298 GO:GO:0000719
Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645
HOGENOM:HOG000245621 GeneTree:ENSGT00500000044813 KO:K01669
GO:GO:0003904 EMBL:X03183 EMBL:M11578 EMBL:Z75294 PIR:S67298
RefSeq:NP_015031.1 ProteinModelPortal:P05066 SMR:P05066
DIP:DIP-6327N IntAct:P05066 MINT:MINT-688138 STRING:P05066
PaxDb:P05066 PeptideAtlas:P05066 EnsemblFungi:YOR386W GeneID:854568
KEGG:sce:YOR386W CYGD:YOR386w OMA:CEDANAR OrthoDB:EOG4XPTQ3
NextBio:977015 Genevestigator:P05066 GermOnline:YOR386W
Uniprot:P05066
Length = 565
Score = 206 (77.6 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 63/228 (27%), Positives = 106/228 (46%)
Query: 63 ETEALKRLEKSLANKEWVRKFEKPNTAPNSLE-PSTTVLSPYLKFGCLSVRLFYHEL--- 118
E AL RL+ L K K N + L T+ LS Y+ G +S RL ++
Sbjct: 308 EEAALSRLKDFLGTKS-----SKYNNEKDMLYLGGTSGLSVYITTGRISTRLIVNQAFQS 362
Query: 119 --KKILATGPHAKPPV-SLLGQIYWREFYYVVGSDTPNFDKMKGNKI-CCQVDWDTNEKY 174
+I++ + + ++ WR+FY + P ++ + W+ N
Sbjct: 363 CNGQIMSKALKDNSSTQNFIKEVAWRDFYRHCMCNWPYTSMGMPYRLDTLDIKWENNPVA 422
Query: 175 LEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLL 234
E W G TG P +DAIMR+L G+I++ +R A FL++ +L + W G+ F + L+
Sbjct: 423 FEKWCTGNTGIPIVDAIMRKLLYTGYINNRSRMITASFLSK-NLLIDWRWGERWFMKHLI 481
Query: 235 DADWAMNAGNWMWLSASAFFHQ-FFRVYSPVAFGKKTDKFELLLDADW 281
D D + N G W + S++ Q +FRV++ KK D +++ W
Sbjct: 482 DGDSSSNVGGWGFCSSTGIDAQPYFRVFNMDIQAKKYDP-QMIFVKQW 528
>ZFIN|ZDB-GENE-120215-243 [details] [associations]
symbol:si:ch73-25i22.2 "si:ch73-25i22.2"
species:7955 "Danio rerio" [GO:0003913 "DNA photolyase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR002081 InterPro:IPR005101 InterPro:IPR018394
Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
ZFIN:ZDB-GENE-120215-243 GO:GO:0006281 GO:GO:0003913
SUPFAM:SSF48173 GeneTree:ENSGT00500000044813 EMBL:CU929153
Ensembl:ENSDART00000151373 Uniprot:I3ITK7
Length = 316
Score = 194 (73.4 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 35/78 (44%), Positives = 51/78 (65%)
Query: 168 WDTNEKYLEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQS 227
W ++ +L+AW G+TGYP +DA MRQL GW+++ RH VA FL L+ W+EG
Sbjct: 4 WSSDHAHLKAWQRGRTGYPLVDAAMRQLWQTGWMNNYMRHVVASFLI-AYLHFPWQEGYR 62
Query: 228 VFEELLLDADWAMNAGNW 245
F++ L+DAD A++A W
Sbjct: 63 WFQDTLVDADVAIDAMMW 80
>UNIPROTKB|Q9KR33 [details] [associations]
symbol:cry1 "Cryptochrome DASH" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 183 (69.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 52/195 (26%), Positives = 90/195 (46%)
Query: 59 FPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHEL 118
F GGE L + ++ ++++ + ++ ST SP+L G +S + Y L
Sbjct: 199 FVGGEQAGLTHCQNYFSSL-LPSRYKETRNGLDGMDYSTK-FSPWLALGAVSPKTIYAML 256
Query: 119 KKILATGPHAKPPVSLLGQIYWREFYYVV----GSDTPNFDKMKGNKICCQVDWDTNEKY 174
++ A + ++ WRE++Y G+ F + K +++
Sbjct: 257 QRYEAVHGANDSTYWIFFELLWREYFYWYARRYGAKLFRFSGIGEKKPLTSF---YAQRF 313
Query: 175 LEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLL 234
L+ W HG+T +P ++A MRQL G++ + R VA L +L L W G + FE L+
Sbjct: 314 LQ-WKHGETPFPIVNACMRQLNQTGYMSNRGRQLVASCLVH-ELGLDWRYGAAYFETQLV 371
Query: 235 DADWAMNAGNWMWLS 249
D D N GNW +L+
Sbjct: 372 DYDVGSNWGNWQYLA 386
>TIGR_CMR|VC_1814 [details] [associations]
symbol:VC_1814 "RNA-binding cryptochrome Cry1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003904
"deoxyribodipyrimidine photo-lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR002081
InterPro:IPR005101 Pfam:PF03441 PRINTS:PR00147 PROSITE:PS00394
InterPro:IPR006050 Pfam:PF00875 GO:GO:0006355 GO:GO:0003677
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006351
GO:GO:0018298 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0415
SUPFAM:SSF52425 SUPFAM:SSF48173 PROSITE:PS51645 PIR:B82155
RefSeq:NP_231448.1 ProteinModelPortal:Q9KR33 DNASU:2613694
GeneID:2613694 KEGG:vch:VC1814 PATRIC:20082676 KO:K01669
OMA:YWLIFEL ProtClustDB:CLSK874544 GO:GO:0003904 InterPro:IPR014133
TIGRFAMs:TIGR02765 Uniprot:Q9KR33
Length = 461
Score = 183 (69.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 52/195 (26%), Positives = 90/195 (46%)
Query: 59 FPGGETEALKRLEKSLANKEWVRKFEKPNTAPNSLEPSTTVLSPYLKFGCLSVRLFYHEL 118
F GGE L + ++ ++++ + ++ ST SP+L G +S + Y L
Sbjct: 199 FVGGEQAGLTHCQNYFSSL-LPSRYKETRNGLDGMDYSTK-FSPWLALGAVSPKTIYAML 256
Query: 119 KKILATGPHAKPPVSLLGQIYWREFYYVV----GSDTPNFDKMKGNKICCQVDWDTNEKY 174
++ A + ++ WRE++Y G+ F + K +++
Sbjct: 257 QRYEAVHGANDSTYWIFFELLWREYFYWYARRYGAKLFRFSGIGEKKPLTSF---YAQRF 313
Query: 175 LEAWSHGKTGYPFIDAIMRQLRLEGWIHHLARHAVACFLTRGDLYLSWEEGQSVFEELLL 234
L+ W HG+T +P ++A MRQL G++ + R VA L +L L W G + FE L+
Sbjct: 314 LQ-WKHGETPFPIVNACMRQLNQTGYMSNRGRQLVASCLVH-ELGLDWRYGAAYFETQLV 371
Query: 235 DADWAMNAGNWMWLS 249
D D N GNW +L+
Sbjct: 372 DYDVGSNWGNWQYLA 386
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.446 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 315 315 0.00082 116 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 624 (66 KB)
Total size of DFA: 277 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.13u 0.09s 26.22t Elapsed: 00:00:15
Total cpu time: 26.14u 0.09s 26.23t Elapsed: 00:00:15
Start: Thu Aug 15 14:21:26 2013 End: Thu Aug 15 14:21:41 2013