BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11422
(687 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6SZQ8|DNLJ_JANMA DNA ligase OS=Janthinobacterium sp. (strain Marseille) GN=ligA PE=3
SV=1
Length = 692
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/672 (50%), Positives = 468/672 (69%), Gaps = 2/672 (0%)
Query: 7 KKINFSKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKD 66
++ + S + R L+ EL+RHN +Y++ DNP I D +YD+L EL+ +E +PELL D
Sbjct: 19 EEPDASNPAARAAWLRDELNRHNYSYHVLDNPSIPDAEYDKLFRELQALETSHPELLVFD 78
Query: 67 SLTQHVGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKF 126
S TQ VG + V H+ M+SL NGF DED+I F+KR+++ L T+ IEY ELKF
Sbjct: 79 SPTQRVGALALSAFPQVTHSVPMLSLGNGFEDEDIIAFDKRVSDGLNSTE-IEYATELKF 137
Query: 127 DGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLI 186
DG+A+NLRYE G L +A+TRGDG GEN+TTNI + IPL L+ PP++L+VR EV++
Sbjct: 138 DGLAINLRYEDGILVEAATRGDGATGENVTTNIRTVRAIPLRLHTATPPKVLDVRGEVMM 197
Query: 187 YKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMP 246
YK D KLN + G K+F NPRNAAAG LRQL+ +I + L FFA+G+G L G MP
Sbjct: 198 YKADLAKLNARQRDAGGKEFANPRNAAAGSLRQLDSRITAQRTLRFFAYGIGMLEGAEMP 257
Query: 247 SSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLST 306
SHS LL+WY ++GL +C E +V+ G L+EFYK + KR LPYEIDGVVYK+N +
Sbjct: 258 PSHSALLDWYAELGLPVCAERAVVKGAAGLLEFYKAVGQKRPTLPYEIDGVVYKVNRVEQ 317
Query: 307 QKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRA 366
Q++LGF SRAPR+A+A+KF ++EALT ++ I +Q+GRTG ITPVA L PVL+ G+T+T A
Sbjct: 318 QQQLGFVSRAPRYAIAHKFPAEEALTTVQGIEVQVGRTGAITPVARLAPVLVGGVTVTNA 377
Query: 367 TLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKII 426
TLHNE E+ RK+IQIGDTV+V R+G+VIP++ + + RP D++ F +P CP+CNS I+
Sbjct: 378 TLHNEDEVRRKDIQIGDTVIVRRAGDVIPEVVAYVPEKRPVDAQPFVMPTNCPVCNSPIV 437
Query: 427 YIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLY 486
+E IARCSG W++C AQRK GL HF SR+AM++ GLG +++E+LV+ +I+ TA DLY
Sbjct: 438 KLEDEAIARCSGGWVKCAAQRKGGLLHFVSRRAMDVEGLGDQLVEQLVDKHIITTAADLY 497
Query: 487 KINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNL 546
K+ F+ L LDR+++K A N++ A++KSK TT +RFIYALGIRHVGE TAKELA +F NL
Sbjct: 498 KLGFRALAELDRMADKSAQNVMAALEKSKSTTLARFIYALGIRHVGEATAKELARHFGNL 557
Query: 547 ECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGNKNY 606
E + +A+EEQLL + IG ++ F++ PL+ LI QL+ G+ W + K +
Sbjct: 558 EALLQASEEQLLEVADIGPVVAQSIRSFLSDPLNMELIEQLQAAGVRWPEHVVENKPKPF 617
Query: 607 LKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNI 666
K FV TG+L R++A IE GGKV +SK T+Y+V G G KL KA +L I
Sbjct: 618 AG-KTFVLTGTLPTLSRDQAAEKIEAAGGKVAGSVSKKTSYVVAGADAGSKLAKAEELGI 676
Query: 667 KILDEKNFVKIV 678
ILDE ++++
Sbjct: 677 TILDESALLQLL 688
>sp|A4G4R4|DNLJ_HERAR DNA ligase OS=Herminiimonas arsenicoxydans GN=ligA PE=3 SV=1
Length = 696
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/675 (50%), Positives = 462/675 (68%), Gaps = 1/675 (0%)
Query: 4 HAKKKINFSKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELL 63
K+ + S S R L+ EL+RHN AYY+ DNPI+ D +YDQL EL+ +E +PELL
Sbjct: 17 QPKEIPDASDPSARAAWLRSELNRHNYAYYVLDNPIVPDAEYDQLFRELQALEASHPELL 76
Query: 64 TKDSLTQHVGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAE 123
DS TQ VG + V H+ M+SL NGF DEDV+ F+KR++ L + +EY E
Sbjct: 77 VFDSPTQRVGALALTAFPPVTHSVPMLSLGNGFEDEDVLAFDKRVSEGLNSREEVEYATE 136
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A+NLRYE G L QA+TRGDG GEN+T NI + IPL L+ PP++L+VR E
Sbjct: 137 LKFDGLAINLRYEDGVLVQAATRGDGATGENVTANIRTVRAIPLRLHTNNPPKVLDVRGE 196
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
V++YK D KLN + G K+F NPRNAAAG LRQL+ +I + L FF++G+G L G
Sbjct: 197 VMMYKADLAKLNARQRDAGAKEFANPRNAAAGSLRQLDSRITAQRSLRFFSYGIGLLEGA 256
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
+MP+SHS LL+WY ++G+ +C E +V+ GV L+EFYK + KR LPYEIDGVVYK+N
Sbjct: 257 DMPASHSALLDWYAELGIPVCSERAVVRGVQGLLEFYKATSEKRPQLPYEIDGVVYKVNR 316
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
+ Q +LGF SRAPRFA+A+KF ++EALT ++ I +Q+GRTG ITPVA L PVL+ G+T+
Sbjct: 317 VDQQLQLGFVSRAPRFAIAHKFPAEEALTTVQDIEVQVGRTGAITPVARLAPVLVGGVTV 376
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+IQIGDTV+V R+G+VIP++ + + RP ++ F +P+ CP+C S
Sbjct: 377 TNATLHNEDEVRRKDIQIGDTVIVRRAGDVIPEVVAFVPERRPASARPFIMPSSCPVCGS 436
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
I+ +E IARCSG W++C AQRK GL HF SR+AM++ GLG +++E+LV+ +I+ TA
Sbjct: 437 PIVRLEDEAIARCSGGWVKCAAQRKGGLLHFVSRRAMDVEGLGDQLVEQLVDKHIITTAA 496
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DLYK+ F+ L LDR+++K A N+L A++KSK TT +RFIYALGIRHVGE TAKELA +F
Sbjct: 497 DLYKLGFRALAELDRMADKSAQNVLDALEKSKRTTLARFIYALGIRHVGEATAKELARHF 556
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGN 603
NL+ + +A+ EQLL + IG + F ++ LI QLR G+ W + +
Sbjct: 557 GNLDALLQASPEQLLEVADIGPVVAASITAFFTDAMNIELIEQLRAAGVTWPEH-VVENR 615
Query: 604 KNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIK 663
L K FV TG+L R+ A IE GGKV +SK T+Y+V G + G KL KA +
Sbjct: 616 PRPLAGKTFVLTGTLPTLSRDAAAEKIEAAGGKVAGSVSKKTSYVVAGAEAGSKLAKAEE 675
Query: 664 LNIKILDEKNFVKIV 678
L + ILDE ++++
Sbjct: 676 LGVTILDETGLLQLL 690
>sp|Q470D2|DNLJ_CUPPJ DNA ligase OS=Cupriavidus pinatubonensis (strain JMP134 / LMG 1197)
GN=ligA PE=3 SV=1
Length = 711
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/676 (46%), Positives = 441/676 (65%), Gaps = 15/676 (2%)
Query: 17 RVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVG 76
RV L+ EL RHN YY+ D P I D +YD L EL+ +E ++PELLT DS TQ VG
Sbjct: 27 RVQWLRDELDRHNYQYYVLDAPTIPDAEYDALFTELQALEAEHPELLTPDSPTQRVGGAP 86
Query: 77 GENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNEL-------------KLTKNIEYIAE 123
V H M+SL+NGFSDEDV F++R L + +EY E
Sbjct: 87 LSAFDTVRHRVPMLSLNNGFSDEDVTGFDRRCAQGLGRSAAAGGEQDLFSAAEGVEYACE 146
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G L QA+TRGDG GE++T N+ I IPL L P +LEVR E
Sbjct: 147 LKFDGLAMSLRYEDGRLVQAATRGDGETGEDVTVNVRTIKAIPLKLR-GAAPAVLEVRGE 205
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
V +Y++DF KLN + G K F NPRNAAAG LRQL+P+I + L FFA+G+GEL+G+
Sbjct: 206 VFMYRRDFDKLNARQAEAGDKTFVNPRNAAAGSLRQLDPRITAKRPLSFFAYGLGELQGI 265
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
P++HS +L+ + +GL +C E +V+ G L++FY+K+ KR LPY+IDGVVYK+N
Sbjct: 266 ERPATHSAMLDGFATMGLPVCNERAVVKGAQGLLDFYRKVGEKRDQLPYDIDGVVYKVNA 325
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
L+ Q++LGF SRAPRFALA+KF ++E T ++ I +Q+GRTG ITPVA L+PV + G+T+
Sbjct: 326 LAEQEQLGFVSRAPRFALAHKFPAQEMTTIVEDIEVQVGRTGAITPVARLQPVFVGGVTV 385
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK++ IGDTV+V R+G+VIP++ + +L RP+D++ F +P CP+C S
Sbjct: 386 TNATLHNEDEVRRKDVHIGDTVIVRRAGDVIPEVVAVVLERRPDDARAFVMPTACPVCGS 445
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
I +E IARC+G I C AQRK L HF+ R+AM+I GLG K++E+LV+ IV T
Sbjct: 446 HIERLEDEAIARCTGGLI-CAAQRKQALLHFAQRRAMDIEGLGDKVVEQLVDQGIVRTPA 504
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DLYK+ L LDR+++K A N++ AI+ S+ TTF+RFI++LGIRHVGE TAK+LA +F
Sbjct: 505 DLYKLGVAKLAALDRMADKSAGNLVAAIEASRSTTFNRFIFSLGIRHVGEATAKDLARHF 564
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGN 603
L+ + A E LL + +G ++ + F +P + +I QLR G++W +
Sbjct: 565 GKLDGLMVADEAALLEVNDVGPVVAQSIVNFFGEPHNVEVIEQLRAAGVHWPESEPVARA 624
Query: 604 KNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIK 663
L K FV TG+L + R A ++E G KV +SK T+Y+V G + G KL+KA
Sbjct: 625 PAPLAGKTFVLTGTLPSLSREAAKEMLEAAGAKVAGSVSKKTDYVVAGAEAGSKLDKAEA 684
Query: 664 LNIKILDEKNFVKIVK 679
L + +LDE + +++
Sbjct: 685 LGVPVLDEAGMLALLE 700
>sp|B2JID1|DNLJ_BURP8 DNA ligase OS=Burkholderia phymatum (strain DSM 17167 / STM815)
GN=ligA PE=3 SV=1
Length = 683
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/674 (47%), Positives = 453/674 (67%), Gaps = 4/674 (0%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S + R L+ EL R N AYY+ D P + D +YD+L EL++IE ++P+L+T DS TQ
Sbjct: 12 SAPAERALWLRDELERANYAYYVLDQPDLPDAEYDRLFKELQQIESEHPDLITPDSPTQR 71
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIAV 131
VG + V H M+SL+NGFSDED+ F+KR+++ L T ++Y ELKFDG+A+
Sbjct: 72 VGGEVASGFRPVVHDMPMLSLNNGFSDEDIAAFDKRVSDTLHHTP-VDYACELKFDGLAI 130
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+LRY G QA+TRGDG GE++T N+ I IPL L K P+L++VR EVL++++DF
Sbjct: 131 SLRYVDGQFTQAATRGDGATGEDVTENVRTIRSIPLKLKGKRVPKLVDVRGEVLMFRRDF 190
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMPSSHSE 251
KLN+ + G ++F NPRNAAAG LRQL+PK+ + L FFA+G+G L G+ MP +HSE
Sbjct: 191 DKLNQRQRDAGQREFANPRNAAAGSLRQLDPKMTAQRPLSFFAYGIGVLDGIEMPGTHSE 250
Query: 252 LLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKLG 311
LL+WY ++GL + E +V+ G ++ F+ K+ KR LPY+IDGVVYK+N Q LG
Sbjct: 251 LLDWYHEMGLPVNSERAVVQGAEGVLGFFHKVGEKRDKLPYDIDGVVYKVNRRDEQDALG 310
Query: 312 FTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHNE 371
F SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+T ATLHNE
Sbjct: 311 FVSRAPRFALAHKFPAQEALTKLIAIDVQVGRTGAITPVARLEPVFVGGATVTNATLHNE 370
Query: 372 SEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYIESN 431
E+ RK+I+IGDTV+V R+G+VIP++ ++L RP D++ F +P CP+C S I +
Sbjct: 371 DEVRRKDIRIGDTVIVRRAGDVIPEVVGALLERRPPDAREFVMPTQCPVCGSAIERLPDE 430
Query: 432 LIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKINFK 491
IARCSG C AQRK L HF+ R+A++I GLG+K+I++LV N+V T DL+ + F
Sbjct: 431 AIARCSGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVELNLVRTPADLFNLGFA 489
Query: 492 NLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLECMFK 551
L LDR + K A N++ +++K+K TT +RFIYALGIRHVGE+TAK+LA +F +L+ +
Sbjct: 490 TLAELDRFAEKSAQNLIDSLEKAKHTTLARFIYALGIRHVGESTAKDLARHFGSLDPIMS 549
Query: 552 ATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-KGNKNYLKE 609
AT E+LL + +G +A +F + +R +I QLR G + W P K + L
Sbjct: 550 ATVEELLEVNDVGPIVAEAIHQFFAEEHNRTVIEQLRAPGKVTWAEGPPAPKAPQGVLAG 609
Query: 610 KIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKIL 669
K V TG+L R+EA L+E G KV +SK T+Y+V G + G KL KA +L I +L
Sbjct: 610 KTVVLTGTLPNMGRDEAKELLEAAGAKVAGSVSKKTDYVVAGAEAGSKLAKAEELGIPVL 669
Query: 670 DEKNFVKIVKGFST 683
DE K+++G +T
Sbjct: 670 DEDGMRKLLEGQTT 683
>sp|A4JF81|DNLJ_BURVG DNA ligase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486)
GN=ligA PE=3 SV=1
Length = 691
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/679 (46%), Positives = 450/679 (66%), Gaps = 11/679 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ R L+ +L R N AYY+ D P + D +YD+L EL+++E +PEL+T DS TQ
Sbjct: 11 SQPDARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFGELQQLEADHPELVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK--------LTKNIEYIAE 123
VG V H M+SL+NGFSD+D++ F+KR+ + L +T +EY E
Sbjct: 71 VGGAVASGFTPVVHDAPMLSLNNGFSDDDIVAFDKRVADALDKPTDLAGSVTDPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QASTRGDG GE++T N+ I IPL L + P LL+VR E
Sbjct: 131 LKFDGLAISLRYERGVFVQASTRGDGTTGEDVTENVRTIRSIPLKLKGAHVPALLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + ++F NPRNAAAG LRQL+PKI + L FF++G+G L GM
Sbjct: 191 VLMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDPKITAQRPLSFFSYGIGVLDGM 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
MP +HS LL+WY+ +GL + E +V+ G L+EF++K+ +R +LPY+IDGVVYK+N
Sbjct: 251 PMPDTHSALLDWYEALGLPVNRERAVVRGAQGLLEFFRKVGERRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q +LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQDRLGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ ++L RP D+ F +P CP+C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGALLERRPVDAAEFVMPTECPVCGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
KI + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 KIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVELNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L LDR + K A N+L +++K+K TT +RFIY LGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYGLGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L+ + A+ E+LL + +G ++ +F + +R +I QLR G + W P K
Sbjct: 550 GSLDPIMDASIEELLEVNDVGPIVAESIHQFFAEEHNRTVIDQLRAPGKVTWPEGPPAPK 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R+ A ++E G KV +SK T+Y+V G + G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPTLTRDAAKEMLEAAGAKVAGSVSKKTDYVVAGAEAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKG 680
+L I +LDE ++++G
Sbjct: 670 EELGIPVLDEDGLHQLLEG 688
>sp|Q13XB0|DNLJ_BURXL DNA ligase OS=Burkholderia xenovorans (strain LB400) GN=ligA PE=3
SV=1
Length = 688
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/676 (47%), Positives = 452/676 (66%), Gaps = 8/676 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S + R L+ EL R N AYY+ D P + D +YD+L EL+ IE ++P+L+ DS TQ
Sbjct: 12 SAPAERAAWLRAELERANYAYYVLDQPDLPDAEYDRLFKELESIETEHPDLIVPDSPTQR 71
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKN-----IEYIAELKF 126
VG + V H M+SL+NGF+DED++ F+KR+ + L + +EY AELKF
Sbjct: 72 VGGEAASGFEPVVHEQPMLSLNNGFADEDIVAFDKRVGDALGKNASEPPVPVEYAAELKF 131
Query: 127 DGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLI 186
DG+A++LRY G QASTRGDG GEN+T N+ I IPL L K P +L+VR EVL+
Sbjct: 132 DGLAISLRYVDGVFVQASTRGDGTTGENVTENVRTIRSIPLRLKGKRVPHVLDVRGEVLM 191
Query: 187 YKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMP 246
+K+DF +LN+ + K+F NPRNAAAG LRQL+ KI + L FF++G+G L GM+MP
Sbjct: 192 FKRDFERLNERQRAAEQKEFANPRNAAAGSLRQLDSKITAQRPLSFFSYGIGVLEGMDMP 251
Query: 247 SSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLST 306
++HSELL+WY+++GL + GE +V+ G L+ F+ + KR LPY+IDGVVYK+N
Sbjct: 252 ATHSELLDWYKELGLPVNGERAVVHGAEGLLGFFHAVGEKREKLPYDIDGVVYKVNRRDE 311
Query: 307 QKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRA 366
Q+ LGF SRAPRFALA+KF ++EALT++ AI++Q+GRTG +TPVA L+PV + G T+T A
Sbjct: 312 QEALGFVSRAPRFALAHKFPAQEALTRLVAIDVQVGRTGAVTPVARLEPVFVGGATVTNA 371
Query: 367 TLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKII 426
TLHNE E+ RK+I+IGDTV+V R+G+VIP++ S++L RP+D++ F +P CP+C S I
Sbjct: 372 TLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSALLDRRPDDAREFVMPTHCPVCGSNIE 431
Query: 427 YIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLY 486
+ IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T DL+
Sbjct: 432 RLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPADLF 490
Query: 487 KINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNL 546
+ F L LDR + K A N+L +++K+K TT +RFIYALGIRHVGE+TAK+LA +F +L
Sbjct: 491 NLGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHFGSL 550
Query: 547 ECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-KGNK 604
+ + A+ E LL + +G ++ +F + +R +I QLR G + W P K +
Sbjct: 551 DPIMDASVEALLEVNDVGPVVAESIHQFFAEEHNRTVIEQLRAPGRVTWPEGPPAPKAPQ 610
Query: 605 NYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKL 664
L K V TG+L + R EA ++E G KV +SK T+Y+V G + G KL KA +L
Sbjct: 611 GVLAGKTVVLTGTLPSLAREEAKEMLEAAGAKVAGSVSKKTDYVVAGAEAGSKLAKAEEL 670
Query: 665 NIKILDEKNFVKIVKG 680
I +LDE K+++G
Sbjct: 671 GIPVLDEDGMRKLLEG 686
>sp|B2T5K0|DNLJ_BURPP DNA ligase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN)
GN=ligA PE=3 SV=1
Length = 688
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/676 (47%), Positives = 448/676 (66%), Gaps = 8/676 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S + R L+ EL R N AYY+ D P + D +YD+L EL+ IE ++P+L+ DS TQ
Sbjct: 12 SAPAERAAWLRAELERANYAYYVLDQPDLPDAEYDKLFKELESIETEHPDLIVPDSPTQR 71
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKN-----IEYIAELKF 126
VG + V H M+SL+NGF+DED++ F+KR+ + L + ++Y AELKF
Sbjct: 72 VGGEAASGFEPVVHDQPMLSLNNGFADEDIVAFDKRVGDALGKNASEPPVPVDYAAELKF 131
Query: 127 DGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLI 186
DG+A++LRY G QASTRGDG GEN+T N+ I IPL L K P +L+VR EVL+
Sbjct: 132 DGLAISLRYVDGAFVQASTRGDGTTGENVTENVRTIRSIPLKLKGKRVPHVLDVRGEVLM 191
Query: 187 YKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMP 246
+K+DF +LN+ + K+F NPRNAAAG LRQL+ KI + L FFA+G+G L GM MP
Sbjct: 192 FKRDFERLNERQRAAEQKEFANPRNAAAGSLRQLDSKITAQRPLSFFAYGIGVLEGMEMP 251
Query: 247 SSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLST 306
++HSELL+WY+++GL + E +V+ G L+ F+ + KR LPY+IDGVVYK+N
Sbjct: 252 ATHSELLDWYKELGLPVNSERAVVQGAEGLLGFFHGVGEKREKLPYDIDGVVYKVNRRDE 311
Query: 307 QKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRA 366
Q LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+T A
Sbjct: 312 QDALGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEPVFVGGATVTNA 371
Query: 367 TLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKII 426
TLHNE E+ RK+I+IGDTV+V R+G+VIP++ S++L RP+D++ F +P CP+C S I
Sbjct: 372 TLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSALLDRRPSDAREFVMPTQCPVCGSSIE 431
Query: 427 YIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLY 486
+ IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T DL+
Sbjct: 432 RLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPADLF 490
Query: 487 KINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNL 546
I F L LDR + K A N+L +++K+K TT +RFIYALGIRHVGE+TAK+LA +F +L
Sbjct: 491 NIGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHFGSL 550
Query: 547 ECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-KGNK 604
+ + A+ E LL + +G ++ +F + +R +I QLR G + W P K +
Sbjct: 551 DPIMDASVEALLEVNDVGPVVAESIHQFFAEEHNRTVIEQLRAPGKVTWPEGPPAPKAPQ 610
Query: 605 NYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKL 664
L K V TG+L + R EA ++E G KV +SK T+YLV G G KL KA +L
Sbjct: 611 GVLAGKTVVLTGTLPSLAREEAKEMLEAAGAKVAGSVSKKTDYLVAGADAGSKLAKAEEL 670
Query: 665 NIKILDEKNFVKIVKG 680
+ +LDE K+++G
Sbjct: 671 GVPVLDEDGMRKLLEG 686
>sp|A9AIK9|DNLJ_BURM1 DNA ligase OS=Burkholderia multivorans (strain ATCC 17616 / 249)
GN=ligA PE=3 SV=1
Length = 691
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/679 (46%), Positives = 450/679 (66%), Gaps = 11/679 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ R L+ +L R N AYY+ D P + D +YD+L EL+++E +P+L+T DS TQ
Sbjct: 11 SQPDVRAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLESDHPDLVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNEL--------KLTKNIEYIAE 123
VG V H M+SL+NGF+D+D++ F+KR+ + L +T +EY E
Sbjct: 71 VGGAVASGFTPVVHDAPMLSLNNGFADDDIVAFDKRVADALGKTTDLAGSVTDPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE+G QASTRGDG GE++T N+ I IPL L P +L+VR E
Sbjct: 131 LKFDGLAISLRYEHGVFVQASTRGDGTTGEDVTENVRTIRSIPLKLKGDRVPAVLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + ++F NPRNAAAG LRQL+PKI + L FFA+G+G L GM
Sbjct: 191 VLMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDPKITAQRPLSFFAYGIGVLDGM 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
MP +HS LL+WY+ +GL + E +V+ G L++F++K+ KR +LPY+IDGVVYK+N
Sbjct: 251 PMPDTHSALLDWYEALGLPVNRERAVVYGAQGLLDFFRKVGEKRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q +LGF SRAPRFALA+KF ++EALTK+ AI +Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQDRLGFVSRAPRFALAHKFPAQEALTKLVAIGVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ ++L RP D+ F +P CP+C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGAVLDRRPADAAEFVMPTECPVCGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
KI + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 KIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVELNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L LDR + K A N+L +++K+K TT +RFIYALGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L+ + AT ++LL + +G ++ +F + +R +I QLR G + W P K
Sbjct: 550 GSLDPIMNATIDELLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRAPGKVTWPEGPPAPK 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R++A ++E G KV +SK T+Y++ G + G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPNLTRDDAKEMLEAAGAKVAGSVSKKTDYVIAGAEAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKG 680
L I +LDE ++++G
Sbjct: 670 EALGIPVLDEDGLHQLLEG 688
>sp|Q2SX03|DNLJ_BURTA DNA ligase OS=Burkholderia thailandensis (strain E264 / ATCC 700388
/ DSM 13276 / CIP 106301) GN=ligA PE=3 SV=1
Length = 691
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/676 (46%), Positives = 450/676 (66%), Gaps = 11/676 (1%)
Query: 17 RVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVG 76
R L+ EL R N AYY+ D P + D +YD+L EL++IE ++P+L+T DS TQ VG
Sbjct: 16 RAAWLRAELERANYAYYVLDQPDLPDAEYDRLFAELQQIEAEHPDLVTPDSPTQRVGGEV 75
Query: 77 GENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK--------LTKNIEYIAELKFDG 128
V H M+SL+NGFSD+DV+ F+KR+ + L +T+ +EY ELKFDG
Sbjct: 76 ASGFTPVVHDTPMLSLNNGFSDDDVVAFDKRVADGLDKPTDLAGTVTEPVEYACELKFDG 135
Query: 129 IAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYK 188
+A++LRYE G QASTRGDG GE++T NI + IPL L K P +L+VR EVL+++
Sbjct: 136 LAISLRYENGRFVQASTRGDGTTGEDVTENIRTVRSIPLTLKGKRVPRMLDVRGEVLMFR 195
Query: 189 KDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMPSS 248
+DF +LN+ + G ++F NPRNAAAG LRQL+ KI ++ L FFA+G+G L G+ MP +
Sbjct: 196 RDFARLNERQRAAGQREFANPRNAAAGSLRQLDSKITASRPLSFFAYGIGVLDGVEMPDT 255
Query: 249 HSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQK 308
HS LL+WY+ +GL + E +V+ G L+EF+ + +R +LPY+IDGVVYK+N Q
Sbjct: 256 HSSLLDWYETLGLPVNRERAVVRGAAGLLEFFHSVGARRESLPYDIDGVVYKVNRRDEQD 315
Query: 309 KLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATL 368
+LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+T ATL
Sbjct: 316 RLGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEPVFVGGATVTNATL 375
Query: 369 HNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYI 428
HNE E+ RK+I+IGDTV+V R+G+VIP++ S++ RP D++ F +P CP C S++ +
Sbjct: 376 HNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSAVFDRRPADAREFVMPTECPECGSRVERL 435
Query: 429 ESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKI 488
IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T DL+ +
Sbjct: 436 PDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPADLFNL 494
Query: 489 NFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLEC 548
F L+ LDR + K A N++ +++K+K TT +RFIYALGIRHVGE+TAK+LA +F +L+
Sbjct: 495 GFSTLVELDRFAEKSAQNLIDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHFGSLDP 554
Query: 549 MFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-KGNKNY 606
+ A+ ++LL + +G ++ +F + +R +I QLR G + W P + +
Sbjct: 555 IMDASIDELLEVNDVGPIVAESIHQFFAEAHNRTVIEQLRAKGKVTWPEGPPAPRAPQGV 614
Query: 607 LKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNI 666
L K V TG+L R A ++E G KV +SK T+Y+V G G KL KA +L I
Sbjct: 615 LAGKTVVLTGTLPTLTREAAKEMLEAAGAKVAGSVSKKTDYVVAGADAGSKLAKAEELGI 674
Query: 667 KILDEKNFVKIVKGFS 682
+LDE K+++G +
Sbjct: 675 PVLDEAGMHKLLEGHA 690
>sp|Q0BE10|DNLJ_BURCM DNA ligase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD)
GN=ligA PE=3 SV=1
Length = 691
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/680 (46%), Positives = 451/680 (66%), Gaps = 13/680 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ R L+ +L R N AYY+ D P + D +YD+L EL+++E +P+L+T DS TQ
Sbjct: 11 SQPDARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFGELQQLETDHPDLVTPDSPTQR 70
Query: 72 VG-LVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNEL--------KLTKNIEYIA 122
VG V G + VH M+SL+NGF+DED+ F+KR+ + L +T +EY
Sbjct: 71 VGGEVAGGFTPVVHDA-PMLSLNNGFADEDIAAFDKRVADALGKTTDLAGSVTDPVEYAC 129
Query: 123 ELKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRC 182
ELKFDG+A++LRYE+G QASTRGDG GE++T N+ I IPL L + P LL+VR
Sbjct: 130 ELKFDGLAISLRYEHGVFVQASTRGDGTTGEDVTENVRTIRSIPLKLKGAHVPALLDVRG 189
Query: 183 EVLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRG 242
EVL++K+DF +LN+ + ++F NPRNAAAG LRQL+PKI + L FFA+G+G L G
Sbjct: 190 EVLMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDPKITAQRPLSFFAYGIGVLDG 249
Query: 243 MNMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKIN 302
M MP +HS LL+WY+ GL + E +V+ G + L+ F++K+ KR +LPY+IDGVVYK+N
Sbjct: 250 MPMPDTHSALLDWYESFGLPVNRERAVVYGADGLLGFFRKVGEKRESLPYDIDGVVYKVN 309
Query: 303 CLSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGIT 362
Q +LGF SRAPRFALA+KF ++EALT++ AI++Q+GRTG ITPVA L+PV + G T
Sbjct: 310 RRDEQDRLGFVSRAPRFALAHKFPAQEALTRLVAIDVQVGRTGAITPVARLEPVFVGGAT 369
Query: 363 ITRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICN 422
+T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ ++L RP+D+ F +P CP+C
Sbjct: 370 VTNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGALLDRRPDDAAEFVMPTECPVCG 429
Query: 423 SKIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTA 482
SKI + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 430 SKIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVELNLVRTP 488
Query: 483 VDLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANY 542
DL+ + F L LDR + K A N+L +++K+K TT +RFIY LGIRHVGE+TAK+LA +
Sbjct: 489 ADLFNLGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYGLGIRHVGESTAKDLAKH 548
Query: 543 FKNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT- 600
F +L + A+ E+LL + +G ++ +F + +R +I QLR G + W P
Sbjct: 549 FGSLTPIMDASIEELLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRAPGKVTWAEGPPAP 608
Query: 601 KGNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEK 660
+ + L K V TG+L R+ A ++E G KV +SK T+Y+V G G KL K
Sbjct: 609 RAPQGVLAGKTVVLTGTLPNLTRDAAKEMLEAAGAKVAGSVSKKTDYVVAGADAGSKLAK 668
Query: 661 AIKLNIKILDEKNFVKIVKG 680
A +L I +LDE ++++G
Sbjct: 669 AEELGIPVLDEDGLHQLLEG 688
>sp|A0K8E8|DNLJ_BURCH DNA ligase OS=Burkholderia cenocepacia (strain HI2424) GN=ligA PE=3
SV=1
Length = 691
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/679 (46%), Positives = 450/679 (66%), Gaps = 11/679 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ R L+ +L R N AYY+ D P + D +YD+L EL+++E +PEL+T DS TQ
Sbjct: 11 SQPDARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNEL--------KLTKNIEYIAE 123
VG V H M+SL+NGF+DED++ F+KR+ + L +T +EY E
Sbjct: 71 VGGEAAGGFTPVVHDAPMLSLNNGFADEDIVAFDKRVADALAKTTDLAGSVTDPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QA+TRGDG GE++T N+ I IPL L K+ P +L+VR E
Sbjct: 131 LKFDGLAISLRYEQGVFVQAATRGDGTTGEDVTENVRTIRSIPLKLKGKHVPAVLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + ++F NPRNAAAG LRQL+ KI + L FFA+G+G L GM
Sbjct: 191 VLMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDSKITAQRPLSFFAYGIGVLDGM 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
MP +HS LL+WY+ +GL + E +V+ G L++F++K+ KR +LPY+IDGVVYK+N
Sbjct: 251 PMPDTHSALLDWYESLGLPVNRERAVVHGAEGLLDFFRKVGEKRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q++LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQERLGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ ++L RP D+ F +P CP+C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGALLDRRPADAAEFVMPTECPVCGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
KI + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 KIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVELNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L LDR + K A N++ +++K+K TT +RFIY LGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFATLAELDRFAEKSAQNLIDSLEKAKHTTLARFIYGLGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L + A+ E+LL + +G ++ +F + +R +I QLR G + W P K
Sbjct: 550 GSLTPIMDASIEELLEVNDVGPIVAESLHQFFAEEHNRTVIEQLRAPGKVTWPEGPPAPK 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R+ A ++E G KV +SK T+Y+V G + G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPNLTRDAAKEMLEAAGAKVAGSVSKKTDYVVAGAEAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKG 680
+L I +LDE ++++G
Sbjct: 670 EELGIPVLDEDGLHQLLEG 688
>sp|Q1BHI7|DNLJ_BURCA DNA ligase OS=Burkholderia cenocepacia (strain AU 1054) GN=ligA
PE=3 SV=2
Length = 691
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/679 (46%), Positives = 450/679 (66%), Gaps = 11/679 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ R L+ +L R N AYY+ D P + D +YD+L EL+++E +PEL+T DS TQ
Sbjct: 11 SQPDARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNEL--------KLTKNIEYIAE 123
VG V H M+SL+NGF+DED++ F+KR+ + L +T +EY E
Sbjct: 71 VGGEAAGGFTPVVHDAPMLSLNNGFADEDIVAFDKRVADALAKTTDLAGSVTDPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QA+TRGDG GE++T N+ I IPL L K+ P +L+VR E
Sbjct: 131 LKFDGLAISLRYEQGVFVQAATRGDGTTGEDVTENVRTIRSIPLKLKGKHVPAVLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + ++F NPRNAAAG LRQL+ KI + L FFA+G+G L GM
Sbjct: 191 VLMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDSKITAQRPLSFFAYGIGVLDGM 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
MP +HS LL+WY+ +GL + E +V+ G L++F++K+ KR +LPY+IDGVVYK+N
Sbjct: 251 PMPDTHSALLDWYESLGLPVNRERAVVHGAEGLLDFFRKVGEKRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q++LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQERLGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ ++L RP D+ F +P CP+C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGALLDRRPADAAEFVMPTECPVCGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
KI + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 KIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVELNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L LDR + K A N++ +++K+K TT +RFIY LGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFATLAELDRFAEKSAQNLIDSLEKAKHTTLARFIYGLGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L + A+ E+LL + +G ++ +F + +R +I QLR G + W P K
Sbjct: 550 GSLTPIMDASIEELLEVNDVGPIVAESLHQFFAEEHNRTVIEQLRAPGKVTWPEGPPAPK 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R+ A ++E G KV +SK T+Y+V G + G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPNLTRDAAKEMLEAAGAKVAGSVSKKTDYVVAGAEAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKG 680
+L I +LDE ++++G
Sbjct: 670 EELGIPVLDEDGLHQLLEG 688
>sp|B1JUF5|DNLJ_BURCC DNA ligase OS=Burkholderia cenocepacia (strain MC0-3) GN=ligA PE=3
SV=1
Length = 691
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/679 (46%), Positives = 450/679 (66%), Gaps = 11/679 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ R L+ +L R N AYY+ D P + D +YD+L EL+++E +PEL+T DS TQ
Sbjct: 11 SQPDARAAWLRDQLERANHAYYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNEL--------KLTKNIEYIAE 123
VG V H M+SL+NGF+DED++ F+KR+ + L +T +EY E
Sbjct: 71 VGGEAAGGFTPVVHDAPMLSLNNGFADEDIVAFDKRVADALAKTTDLAGSVTDPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QA+TRGDG GE++T N+ I IPL L K+ P +L+VR E
Sbjct: 131 LKFDGLAISLRYEQGVFVQAATRGDGTTGEDVTENVRTIRSIPLKLKGKHVPAVLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + ++F NPRNAAAG LRQL+ KI + L FFA+G+G L GM
Sbjct: 191 VLMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDSKITAQRPLSFFAYGIGVLDGM 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
MP +HS LL+WY+ +GL + E +V+ G L++F++K+ KR +LPY+IDGVVYK+N
Sbjct: 251 PMPDTHSALLDWYESLGLPVNRERAVVHGAEGLLDFFRKVGEKRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q++LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQERLGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ ++L RP D+ F +P CP+C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGALLDRRPADAAEFVMPTECPVCGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
KI + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 KIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVELNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L LDR + K A N++ +++K+K TT +RFIY LGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFATLAELDRFAEKSAQNLIDSLEKAKHTTLARFIYGLGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L + A+ E+LL + +G ++ +F + +R +I QLR G + W P K
Sbjct: 550 GSLTPIMDASIEELLEVNDVGPIVAESLHQFFAEEHNRTVIEQLRAPGKVTWPEGPPAPK 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R+ A ++E G KV +SK T+Y+V G + G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPNLTRDAAKEMLEAAGAKVAGSVSKKTDYVVAGAEAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKG 680
+L I +LDE ++++G
Sbjct: 670 EELGIPVLDEDGLHQLLEG 688
>sp|B1YSH2|DNLJ_BURA4 DNA ligase OS=Burkholderia ambifaria (strain MC40-6) GN=ligA PE=3
SV=1
Length = 691
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/680 (46%), Positives = 451/680 (66%), Gaps = 13/680 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ R L+ +L R N AYY+ D P + D +YD+L EL+++E +P+L+T DS TQ
Sbjct: 11 SQPDARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFGELQQLETDHPDLVTPDSPTQR 70
Query: 72 VG-LVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNEL--------KLTKNIEYIA 122
VG V G + VH M+SL+NGF+DED+ F+KR+ + L +T +EY
Sbjct: 71 VGGEVAGGFTPVVHDA-PMLSLNNGFADEDIAAFDKRVADALGKTTDLAGSVTDPVEYAC 129
Query: 123 ELKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRC 182
ELKFDG+A++LRYE+G QASTRGDG GE++T N+ I IPL L + P LL+VR
Sbjct: 130 ELKFDGLAISLRYEHGVFVQASTRGDGTTGEDVTENVRTIRSIPLKLKGAHVPALLDVRG 189
Query: 183 EVLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRG 242
EVL++K+DF +LN+ + ++F NPRNAAAG LRQL+PKI + L FFA+G+G L G
Sbjct: 190 EVLMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDPKITAQRPLSFFAYGIGVLDG 249
Query: 243 MNMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKIN 302
M MP +HS LL+WY+ GL + E +V+ G + L+ F++K+ KR +LPY+IDGVVYK+N
Sbjct: 250 MPMPDTHSALLDWYESFGLPVNRERAVVYGADGLLGFFRKVGEKRESLPYDIDGVVYKVN 309
Query: 303 CLSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGIT 362
Q +LGF SRAPRFALA+KF ++EALT++ AI++Q+GRTG ITPVA L+PV + G T
Sbjct: 310 RRDEQDRLGFVSRAPRFALAHKFPAQEALTRLVAIDVQVGRTGAITPVARLEPVFVGGAT 369
Query: 363 ITRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICN 422
+T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ ++L RP+D+ F +P CP+C
Sbjct: 370 VTNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGALLERRPDDAAEFVMPTECPVCG 429
Query: 423 SKIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTA 482
SKI + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 430 SKIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVELNLVRTP 488
Query: 483 VDLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANY 542
DL+ + F L LDR + K A N+L +++K+K TT +RFIY LGIRHVGE+TAK+LA +
Sbjct: 489 ADLFNLGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYGLGIRHVGESTAKDLAKH 548
Query: 543 FKNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT- 600
F +L + A+ E+LL + +G ++ +F + +R +I QLR G + W P
Sbjct: 549 FGSLTPIMDASIEELLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRAPGKVTWPEGPPAP 608
Query: 601 KGNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEK 660
K + L K V TG+L R+ A ++E G KV +SK T+Y+V G G KL K
Sbjct: 609 KAPQGVLAGKTVVLTGTLPNLTRDAAKEMLEAAGAKVAGSVSKKTDYVVAGADAGSKLAK 668
Query: 661 AIKLNIKILDEKNFVKIVKG 680
A +L I +LDE ++++G
Sbjct: 669 AEELGIPVLDEDGLHQLLEG 688
>sp|A1V575|DNLJ_BURMS DNA ligase OS=Burkholderia mallei (strain SAVP1) GN=ligA PE=3 SV=1
Length = 691
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 450/681 (66%), Gaps = 11/681 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ + R L+ EL R N AYY+ D P + D +YD+L EL++IE ++P+L+T DS TQ
Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK--------LTKNIEYIAE 123
VG V H M+SL+NGF+DEDVI F+KR+ + L +T+ +EY E
Sbjct: 71 VGGEAASGFTPVVHDKPMLSLNNGFADEDVIAFDKRVADGLDKATDLAGTVTEPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QASTRGDG GE++T NI I IPL L K P +L+VR E
Sbjct: 131 LKFDGLAISLRYENGRFVQASTRGDGTTGEDVTENIRTIRAIPLTLKGKRIPRMLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + G ++F NPRNAAAG LRQL+ KI ++ L FFA+G+G L G
Sbjct: 191 VLMFKRDFARLNERQRAAGQREFANPRNAAAGSLRQLDSKITASRPLSFFAYGIGVLDGA 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
+MP +HS LL+WY+ +GL + E +V+ G L+ F+ + +R +LPY+IDGVVYK+N
Sbjct: 251 DMPDTHSGLLDWYETLGLPVNRERAVVRGAAGLLAFFHSVGERRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q +LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQDRLGFVSRAPRFALAHKFPAQEALTKLTAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ S++L RP D++ F +P CP C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSAVLDRRPADAQEFVMPTECPECGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
+I + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 RIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L+ LDR + K A N++ +++K+K TT +RFIYALGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFSTLVALDRFAEKSARNLIDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L+ + A + LL + +G ++ +F + +R +I QLR G + W P +
Sbjct: 550 GSLDPIMDAPIDALLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRARGKVTWPEGPPAPR 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R A ++E G KV +SK T+Y+V G G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPTLTREAAKEMLEAAGAKVAGSVSKKTDYVVAGADAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKGFS 682
+L I +LDE +++G +
Sbjct: 670 EELGIPVLDEAGMHTLLEGHA 690
>sp|Q62JB9|DNLJ_BURMA DNA ligase OS=Burkholderia mallei (strain ATCC 23344) GN=ligA PE=3
SV=1
Length = 691
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 450/681 (66%), Gaps = 11/681 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ + R L+ EL R N AYY+ D P + D +YD+L EL++IE ++P+L+T DS TQ
Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK--------LTKNIEYIAE 123
VG V H M+SL+NGF+DEDVI F+KR+ + L +T+ +EY E
Sbjct: 71 VGGEAASGFTPVVHDKPMLSLNNGFADEDVIAFDKRVADGLDKATDLAGTVTEPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QASTRGDG GE++T NI I IPL L K P +L+VR E
Sbjct: 131 LKFDGLAISLRYENGRFVQASTRGDGTTGEDVTENIRTIRAIPLTLKGKRIPRMLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + G ++F NPRNAAAG LRQL+ KI ++ L FFA+G+G L G
Sbjct: 191 VLMFKRDFARLNERQRAAGQREFANPRNAAAGSLRQLDSKITASRPLSFFAYGIGVLDGA 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
+MP +HS LL+WY+ +GL + E +V+ G L+ F+ + +R +LPY+IDGVVYK+N
Sbjct: 251 DMPDTHSGLLDWYETLGLPVNRERAVVRGAAGLLAFFHSVGERRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q +LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQDRLGFVSRAPRFALAHKFPAQEALTKLTAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ S++L RP D++ F +P CP C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSAVLDRRPADAQEFVMPTECPECGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
+I + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 RIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L+ LDR + K A N++ +++K+K TT +RFIYALGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFSTLVALDRFAEKSARNLIDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L+ + A + LL + +G ++ +F + +R +I QLR G + W P +
Sbjct: 550 GSLDPIMDAPIDALLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRARGKVTWPEGPPAPR 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R A ++E G KV +SK T+Y+V G G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPTLTREAAKEMLEAAGAKVAGSVSKKTDYVVAGADAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKGFS 682
+L I +LDE +++G +
Sbjct: 670 EELGIPVLDEAGMHTLLEGHA 690
>sp|A2SB66|DNLJ_BURM9 DNA ligase OS=Burkholderia mallei (strain NCTC 10229) GN=ligA PE=3
SV=1
Length = 691
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 450/681 (66%), Gaps = 11/681 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ + R L+ EL R N AYY+ D P + D +YD+L EL++IE ++P+L+T DS TQ
Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK--------LTKNIEYIAE 123
VG V H M+SL+NGF+DEDVI F+KR+ + L +T+ +EY E
Sbjct: 71 VGGEAASGFTPVVHDKPMLSLNNGFADEDVIAFDKRVADGLDKATDLAGTVTEPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QASTRGDG GE++T NI I IPL L K P +L+VR E
Sbjct: 131 LKFDGLAISLRYENGRFVQASTRGDGTTGEDVTENIRTIRAIPLTLKGKRIPRMLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + G ++F NPRNAAAG LRQL+ KI ++ L FFA+G+G L G
Sbjct: 191 VLMFKRDFARLNERQRAAGQREFANPRNAAAGSLRQLDSKITASRPLSFFAYGIGVLDGA 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
+MP +HS LL+WY+ +GL + E +V+ G L+ F+ + +R +LPY+IDGVVYK+N
Sbjct: 251 DMPDTHSGLLDWYETLGLPVNRERAVVRGAAGLLAFFHSVGERRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q +LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQDRLGFVSRAPRFALAHKFPAQEALTKLTAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ S++L RP D++ F +P CP C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSAVLDRRPADAQEFVMPTECPECGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
+I + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 RIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L+ LDR + K A N++ +++K+K TT +RFIYALGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFSTLVALDRFAEKSARNLIDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L+ + A + LL + +G ++ +F + +R +I QLR G + W P +
Sbjct: 550 GSLDPIMDAPIDALLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRARGKVTWPEGPPAPR 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R A ++E G KV +SK T+Y+V G G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPTLTREAAKEMLEAAGAKVAGSVSKKTDYVVAGADAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKGFS 682
+L I +LDE +++G +
Sbjct: 670 EELGIPVLDEAGMHTLLEGHA 690
>sp|A3MKU9|DNLJ_BURM7 DNA ligase OS=Burkholderia mallei (strain NCTC 10247) GN=ligA PE=3
SV=1
Length = 691
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 450/681 (66%), Gaps = 11/681 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ + R L+ EL R N AYY+ D P + D +YD+L EL++IE ++P+L+T DS TQ
Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK--------LTKNIEYIAE 123
VG V H M+SL+NGF+DEDVI F+KR+ + L +T+ +EY E
Sbjct: 71 VGGEAASGFTPVVHDKPMLSLNNGFADEDVIAFDKRVADGLDKATDLAGTVTEPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QASTRGDG GE++T NI I IPL L K P +L+VR E
Sbjct: 131 LKFDGLAISLRYENGRFVQASTRGDGTTGEDVTENIRTIRAIPLTLKGKRIPRMLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + G ++F NPRNAAAG LRQL+ KI ++ L FFA+G+G L G
Sbjct: 191 VLMFKRDFARLNERQRAAGQREFANPRNAAAGSLRQLDSKITASRPLSFFAYGIGVLDGA 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
+MP +HS LL+WY+ +GL + E +V+ G L+ F+ + +R +LPY+IDGVVYK+N
Sbjct: 251 DMPDTHSGLLDWYETLGLPVNRERAVVRGAAGLLAFFHSVGERRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q +LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQDRLGFVSRAPRFALAHKFPAQEALTKLTAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ S++L RP D++ F +P CP C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSAVLDRRPADAQEFVMPTECPECGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
+I + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 RIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L+ LDR + K A N++ +++K+K TT +RFIYALGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFSTLVALDRFAEKSARNLIDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L+ + A + LL + +G ++ +F + +R +I QLR G + W P +
Sbjct: 550 GSLDPIMDAPIDALLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRARGKVTWPEGPPAPR 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R A ++E G KV +SK T+Y+V G G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPTLTREAAKEMLEAAGAKVAGSVSKKTDYVVAGADAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKGFS 682
+L I +LDE +++G +
Sbjct: 670 EELGIPVLDEAGMHTLLEGHA 690
>sp|Q0KA11|DNLJ_CUPNH DNA ligase OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier 337) GN=ligA PE=3 SV=1
Length = 709
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/671 (46%), Positives = 433/671 (64%), Gaps = 15/671 (2%)
Query: 17 RVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVG 76
RV L+ EL RHN YY+ D P I D +YD L EL+ +E ++PEL T DS TQ VG
Sbjct: 27 RVAWLRDELDRHNYQYYVLDAPTIPDAEYDALFSELQALELEHPELQTPDSPTQRVGGEP 86
Query: 77 GENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLT-------------KNIEYIAE 123
V H M+SL+NGF+D+DV+ F++R L T +EY E
Sbjct: 87 LSAFDSVRHRVPMLSLNNGFADDDVLNFDRRCAQGLGRTAPAAGEQDLFSAADAVEYACE 146
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G L QA+TRGDG GE++T N+ I IPL L + P +LEVR E
Sbjct: 147 LKFDGLAMSLRYEDGRLVQAATRGDGETGEDVTVNVRTIKAIPLKLRGQAP-AVLEVRGE 205
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
V +Y+ DF KLN+ + G K F NPRNAAAG LRQL+P+I + L FFA+G+GEL+G+
Sbjct: 206 VFMYRGDFDKLNERQAEAGEKTFVNPRNAAAGSLRQLDPRITAKRPLSFFAYGLGELQGV 265
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
+ P +HS +L+ + +GL +C + +V+ G L++FY+ I +R LPY+IDGVVYK+N
Sbjct: 266 DRPPTHSAMLDGFAALGLPVCKDRAVVKGAQGLLDFYRDIGQRRDALPYDIDGVVYKVNA 325
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
L+ Q++LGF SRAPRFALA+KF ++E T ++ I +Q+GRTG ITPVA LKPV + G+T+
Sbjct: 326 LAEQERLGFVSRAPRFALAHKFPAQEMTTIVEDIEVQVGRTGAITPVARLKPVFVGGVTV 385
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE EI RK++ IGDTV+V R+G+VIP++ + + RP+D++ F +P CP+C S
Sbjct: 386 TNATLHNEDEIRRKDVHIGDTVIVRRAGDVIPEVVAVVTERRPDDARAFVMPTACPVCGS 445
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
I +E IARC+G I C AQRK L HF+ R+AM+I GLG K++E+LV+ IV T
Sbjct: 446 HIEKLEDEAIARCTGGLI-CAAQRKQALLHFAQRRAMDIEGLGDKLVEQLVDQGIVRTPA 504
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+K+ L L+R+++K A N++ AI S+ TT +RFI+ALGIRHVGE TAK+LA +F
Sbjct: 505 DLFKLGVAKLAALERMADKSAANLVAAIDASRETTMNRFIFALGIRHVGEATAKDLARHF 564
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGN 603
L+ + A E LL + +G ++ F +P + +I QLR G++W +
Sbjct: 565 GKLDALMAADEAALLEVNDVGPVVAQSIAHFFAEPHNVEVIEQLRAAGVHWTESEPVAKA 624
Query: 604 KNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIK 663
L K FV TG+L R +A L+E G KV +SK T+Y+V G + G KL+KA
Sbjct: 625 PAPLSGKTFVLTGTLPTMSREDAKELLEAAGAKVAGSVSKKTDYVVAGAEAGSKLDKAEA 684
Query: 664 LNIKILDEKNF 674
L + +LDE
Sbjct: 685 LGVPVLDEAGM 695
>sp|A3NAV3|DNLJ_BURP6 DNA ligase OS=Burkholderia pseudomallei (strain 668) GN=ligA PE=3
SV=1
Length = 691
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 450/681 (66%), Gaps = 11/681 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ + R L+ EL R N AYY+ D P + D +YD+L EL++IE ++P+L+T DS TQ
Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK--------LTKNIEYIAE 123
VG V H M+SL+NGF+DEDVI F+KR+ + L +T+ +EY E
Sbjct: 71 VGGEAASGFTPVVHDKPMLSLNNGFADEDVIAFDKRVADGLDKATDLAGTVTEPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QASTRGDG GE++T NI I IPL L K P +L+VR E
Sbjct: 131 LKFDGLAISLRYENGRFVQASTRGDGTTGEDVTENIRTIRAIPLTLKGKRLPRMLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + G ++F NPRNAAAG LRQL+ KI ++ L FFA+G+G L G
Sbjct: 191 VLMFKRDFARLNERQRAAGQREFANPRNAAAGSLRQLDSKITASRPLSFFAYGIGVLDGA 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
+MP +HS LL+WY+ +GL + E +V+ G L+ F+ + +R +LPY+IDGVVYK+N
Sbjct: 251 DMPDTHSGLLDWYETLGLPVNRERAVVRGAAGLLAFFHSVGERRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q +LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQDRLGFVSRAPRFALAHKFPAQEALTKLIAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ S++L RP D++ F +P CP C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSAVLDRRPADAQEFVMPTECPECGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
+I + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 RIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L+ LDR + K A N++ +++K+K TT +RFIYALGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFSTLVALDRFAEKSARNLIDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L+ + A + LL + +G ++ +F + +R +I QLR G + W P +
Sbjct: 550 GSLDPIMDAPIDALLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRARGKVTWPEGPPAPR 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R A ++E G KV +SK T+Y+V G G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPTLTREAAKEMLEAAGAKVAGSVSKKTDYVVAGADAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKGFS 682
+L I +LDE +++G +
Sbjct: 670 EELGIPVLDEAGMHTLLEGHA 690
>sp|A3NWN7|DNLJ_BURP0 DNA ligase OS=Burkholderia pseudomallei (strain 1106a) GN=ligA PE=3
SV=1
Length = 691
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 450/681 (66%), Gaps = 11/681 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ + R L+ EL R N AYY+ D P + D +YD+L EL++IE ++P+L+T DS TQ
Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK--------LTKNIEYIAE 123
VG V H M+SL+NGF+DEDVI F+KR+ + L +T+ +EY E
Sbjct: 71 VGGEAASGFTPVVHDKPMLSLNNGFADEDVIAFDKRVADGLDKATDLAGTVTEPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QASTRGDG GE++T NI I IPL L K P +L+VR E
Sbjct: 131 LKFDGLAISLRYENGRFVQASTRGDGTTGEDVTENIRTIRAIPLTLKGKRIPRMLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + G ++F NPRNAAAG LRQL+ KI ++ L FFA+G+G L G
Sbjct: 191 VLMFKRDFARLNERQRAAGQREFANPRNAAAGSLRQLDSKITASRPLSFFAYGIGVLDGA 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
+MP +HS LL+WY+ +GL + E +V+ G L+ F+ + +R +LPY+IDGVVYK+N
Sbjct: 251 DMPDTHSGLLDWYETLGLPVNRERAVVRGAAGLLAFFHSVGERRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q +LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQDRLGFVSRAPRFALAHKFPAQEALTKLIAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ S++L RP D++ F +P CP C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSAVLDRRPADAQEFVMPTECPECGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
+I + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 RIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L+ LDR + K A N++ +++K+K TT +RFIYALGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFSTLVALDRFAEKSARNLIDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L+ + A + LL + +G ++ +F + +R +I QLR G + W P +
Sbjct: 550 GSLDPIMDAPIDALLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRARGKVTWPEGPPAPR 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R A ++E G KV +SK T+Y+V G G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPTLTREAAKEMLEAAGAKVAGSVSKKTDYVVAGADAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKGFS 682
+L I +LDE +++G +
Sbjct: 670 EELGIPVLDEAGMHTLLEGHA 690
>sp|B4ECN6|DNLJ_BURCJ DNA ligase OS=Burkholderia cepacia (strain J2315 / LMG 16656)
GN=ligA PE=3 SV=1
Length = 691
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/679 (46%), Positives = 449/679 (66%), Gaps = 11/679 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ R L+ +L R N AYY+ D P + D +YD+L EL+++E +PEL+T DS TQ
Sbjct: 11 SQPDARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNEL--------KLTKNIEYIAE 123
VG V H M+SL+NGF+DED++ F+KR+ + L +T +EY E
Sbjct: 71 VGGEAAGGFTPVVHDAPMLSLNNGFADEDIVAFDKRVADALAKATDLAGSVTDPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QA+TRGDG GE++T N+ I IPL L K+ P +L+VR E
Sbjct: 131 LKFDGLAISLRYENGVFVQAATRGDGTTGEDVTENVRTIRSIPLKLKGKHVPAVLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + ++F NPRNAAAG LRQL+ KI + L FFA+G+G L GM
Sbjct: 191 VLMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDSKITAQRPLSFFAYGIGVLDGM 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
MP +H+ LL+WY+ GL + E +V+ G L++F++K+ KR +LPY+IDGVVYK+N
Sbjct: 251 PMPDTHTALLDWYEAFGLPVNRERAVVHGAEGLLDFFRKVGEKRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q++LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQERLGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ ++L RP D+ F +P CP+C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGALLDRRPADAAEFVMPTECPVCGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
KI + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 KIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVELNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L LDR + K A N+L +++K+K TT +RFIY LGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYGLGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L + A+ E+LL + +G ++ +F + +R +I QLR G + W P K
Sbjct: 550 GSLTPIMDASIEELLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRAPGKVTWPEGPPAPK 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R+ A ++E G KV +SK T+Y+V G + G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPNLTRDAAKEMLEAAGAKVAGSVSKKTDYVVAGAEAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKG 680
+L I +LDE ++++G
Sbjct: 670 EELGIPVLDEDGLHQLLEG 688
>sp|Q3JR23|DNLJ_BURP1 DNA ligase OS=Burkholderia pseudomallei (strain 1710b) GN=ligA PE=3
SV=1
Length = 691
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 450/681 (66%), Gaps = 11/681 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ + R L+ EL R N AYY+ D P + D +YD+L EL++IE ++P+L+T DS TQ
Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK--------LTKNIEYIAE 123
VG V H M+SL+NGF+DEDVI F+KR+ + L +T+ +EY E
Sbjct: 71 VGGEAASGFTPVVHDKPMLSLNNGFADEDVIAFDKRVADGLDKATDLAGTVTEPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QASTRGDG GE++T NI I IPL L K P +L+VR E
Sbjct: 131 LKFDGLAISLRYENGRFVQASTRGDGTTGEDVTENIRTIRAIPLTLKGKRIPRMLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + G ++F NPRNAAAG LRQL+ KI ++ L FFA+G+G L G
Sbjct: 191 VLMFKRDFARLNERQRAAGQREFANPRNAAAGSLRQLDSKITASRPLSFFAYGIGVLDGA 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
+MP +HS LL+WY+ +GL + E +V+ G L+ F+ + +R +LPY+IDGVVYK+N
Sbjct: 251 DMPDTHSGLLDWYETLGLPVNRERAVVRGAAGLLAFFHSVGERRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q +LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQDRLGFVSRAPRFALAHKFPAQEALTKLIAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ S++L RP D++ F +P CP C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSAVLDRRPADAQEFVMPTECPECGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
+I + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 RIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L+ LDR + K A N++ +++K+K TT +RFIYALGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFSTLVALDRFAEKSARNLIDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L+ + A + LL + +G ++ +F + +R +I QLR G + W P +
Sbjct: 550 GSLDPIMHAPIDALLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRARGKVTWPEGPPAPR 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R A ++E G KV +SK T+Y+V G G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPTLTREAAKEMLEAAGAKVAGSVSKKTDYVVAGADAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKGFS 682
+L I +LDE +++G +
Sbjct: 670 EELGIPVLDEAGMHTLLEGHA 690
>sp|Q63T07|DNLJ_BURPS DNA ligase OS=Burkholderia pseudomallei (strain K96243) GN=ligA
PE=3 SV=1
Length = 691
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/681 (46%), Positives = 450/681 (66%), Gaps = 11/681 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ + R L+ EL R N AYY+ D P + D +YD+L EL++IE ++P+L+T DS TQ
Sbjct: 11 SQPAKRAAWLRAELERANYAYYVLDQPDLPDAEYDRLFVELQRIEAEHPDLVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK--------LTKNIEYIAE 123
VG V H M+SL+NGF+DEDVI F+KR+ + L +T+ +EY E
Sbjct: 71 VGGEAASGFTPVVHDKPMLSLNNGFADEDVIAFDKRVADGLDKATDLAGTVTEPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QASTRGDG GE++T NI I IPL L K P +L+VR E
Sbjct: 131 LKFDGLAISLRYENGRFVQASTRGDGTTGEDVTENIRTIRAIPLTLKGKRIPRMLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + G ++F NPRNAAAG LRQL+ KI ++ L FFA+G+G L G
Sbjct: 191 VLMFKRDFARLNERQRAAGQREFANPRNAAAGSLRQLDSKITASRPLSFFAYGIGVLDGA 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
+MP +HS LL+WY+ +GL + E +V+ G L+ F+ + +R +LPY+IDGVVYK+N
Sbjct: 251 DMPDTHSGLLDWYETLGLPVNRERAVVRGAAGLLAFFHSVGERRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q +LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQDRLGFVSRAPRFALAHKFPAQEALTKLIAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ S++L RP D++ F +P CP C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSAVLDRRPADAQEFVMPTECPECGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
+I + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 RIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L+ LDR + K A N++ +++K+K TT +RFIYALGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFSTLVGLDRFAEKSARNLIDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L+ + A + LL + +G ++ +F + +R +I QLR G + W P +
Sbjct: 550 GSLDPIMDAPIDALLEVNDVGPIVAESIHQFFAEEHNRTVIEQLRARGKVTWPEGPPAPR 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R A ++E G KV +SK T+Y+V G G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPTLTREAAKEMLEAAGAKVAGSVSKKTDYVVAGADAGSKLAKA 669
Query: 662 IKLNIKILDEKNFVKIVKGFS 682
+L I +LDE +++G +
Sbjct: 670 EELGIPVLDEAGMHTLLEGHA 690
>sp|B3R2C2|DNLJ_CUPTR DNA ligase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424)
GN=ligA PE=3 SV=1
Length = 709
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/671 (45%), Positives = 433/671 (64%), Gaps = 15/671 (2%)
Query: 17 RVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVG 76
RV L++EL RHN YY+ D P + D +YD L EL +E ++PEL T DS TQ VG
Sbjct: 27 RVAWLREELDRHNYQYYVLDAPTVPDAEYDALFSELMALELEHPELQTPDSPTQRVGGEP 86
Query: 77 GENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLT-------------KNIEYIAE 123
V H M+SL+N F+DEDV+ F++R L T +EY E
Sbjct: 87 LSAFDSVRHRVPMLSLNNAFADEDVLNFDRRCAQGLGRTAPAAGEADLFSAADAVEYACE 146
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G L QA+TRGDG GE++T N+ I IPL L + P +LEVR E
Sbjct: 147 LKFDGLAMSLRYEDGRLVQAATRGDGETGEDVTVNVRTIKAIPLKLRGQAP-AVLEVRGE 205
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
V ++++DF KLN + G K F NPRNAAAG LRQL+P+I + L FFA+G+GEL+G+
Sbjct: 206 VFMFRRDFDKLNARQAEAGEKTFVNPRNAAAGSLRQLDPRITARRPLSFFAYGLGELQGV 265
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
P +HS +L+ + +GL +C + +V+ G L++FY+ I +R +LPY+IDGVVYK+N
Sbjct: 266 ERPPTHSAMLDGFAALGLPVCKDRAVVKGAQGLLDFYRDIGKRRDDLPYDIDGVVYKVNA 325
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
L+ Q++LGF SRAPRFALA+KF ++E T ++ I +Q+GRTG ITPVA L+PV + G+T+
Sbjct: 326 LAEQERLGFVSRAPRFALAHKFPAQEMTTVVEDIEVQVGRTGAITPVARLRPVFVGGVTV 385
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE EI RK++ +GDTV+V R+G+VIP++ + + RP D++ F +P CP+C S
Sbjct: 386 TNATLHNEDEIRRKDVHVGDTVIVRRAGDVIPEVVAVVAERRPADARAFVMPTACPVCGS 445
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
I +E IARC+G I C AQRK L HF+ R+AM+I GLG +++E+LV+ IV T
Sbjct: 446 HIEKLEDEAIARCTGGLI-CAAQRKQSLLHFAQRRAMDIEGLGDRLVEQLVDQGIVRTPA 504
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DLYK+ L L+R+++K A N++ AI KS+ TT +RFI+ALGIRHVGE TAK+LA +F
Sbjct: 505 DLYKLGVAKLAALERMADKSAANLVAAIDKSRATTMNRFIFALGIRHVGEATAKDLARHF 564
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGN 603
L+ + A E LL + +G ++ F +P + +I QLR G++W + +
Sbjct: 565 GKLDALMAADEAALLEVNDVGPVVAQSIAHFFAEPHNVEVIEQLRAAGVHWPESEPVAKS 624
Query: 604 KNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIK 663
L K FV TG+L R +A L+E G KV +SK T+Y+V G + G KL+KA
Sbjct: 625 PAPLSGKTFVLTGTLPTLSREDAKELLEAAGAKVAGSVSKKTDYVVAGAEAGSKLDKAEA 684
Query: 664 LNIKILDEKNF 674
L + +LDE
Sbjct: 685 LGVPVLDEAGM 695
>sp|Q39F38|DNLJ_BURS3 DNA ligase OS=Burkholderia sp. (strain 383) GN=ligA PE=3 SV=1
Length = 691
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/679 (46%), Positives = 447/679 (65%), Gaps = 11/679 (1%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
S+ R L+ +L R N AYY+ D P + D +YD+L EL+++E +PEL+T DS TQ
Sbjct: 11 SQPDARAAWLRDQLERANYAYYVLDQPDLPDAEYDRLFRELQQLETDHPELVTPDSPTQR 70
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK--------LTKNIEYIAE 123
VG V H M+SL+NGF+DED+ F+KR+ + L +T+ +EY E
Sbjct: 71 VGGEAAGGFTPVVHDAPMLSLNNGFADEDIAAFDKRVADALDKTTDLAGSVTEPVEYACE 130
Query: 124 LKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCE 183
LKFDG+A++LRYE G QASTRGDG GE++T N+ I IPL L K+ P +L+VR E
Sbjct: 131 LKFDGLAISLRYEQGVFVQASTRGDGTTGEDVTENVRTIRSIPLKLKGKHVPAVLDVRGE 190
Query: 184 VLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM 243
VL++K+DF +LN+ + ++F NPRNAAAG LRQL+ KI + L FFA+G+G L GM
Sbjct: 191 VLMFKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDSKITAQRPLSFFAYGIGVLDGM 250
Query: 244 NMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINC 303
M +HS LL+WY+ +GL + E V+ G L+ F++KI KR +LPY+IDGVVYK+N
Sbjct: 251 PMLDTHSALLDWYESLGLPVNREREVVQGAEGLLGFFRKIGEKRESLPYDIDGVVYKVNR 310
Query: 304 LSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITI 363
Q++LGF SRAPRFALA+KF ++EALTK+ AI++Q+GRTG ITPVA L+PV + G T+
Sbjct: 311 RDEQERLGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEPVFVGGATV 370
Query: 364 TRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNS 423
T ATLHNE E+ RK+I+IGDTV+V R+G+VIP++ ++L RP D+ F +P CP+C S
Sbjct: 371 TNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVGALLDRRPADAAEFVMPTECPVCGS 430
Query: 424 KIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAV 483
KI + IARC+G C AQRK L HF+ R+A++I GLG+K+I++LV N+V T
Sbjct: 431 KIERLPDEAIARCTGGLF-CPAQRKQALWHFAQRRALDIDGLGEKIIDQLVELNLVRTPA 489
Query: 484 DLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYF 543
DL+ + F L LDR + K A N+L +++K+K TT +RFIY LGIRHVGE+TAK+LA +F
Sbjct: 490 DLFNLGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYGLGIRHVGESTAKDLAKHF 549
Query: 544 KNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVG-IYWLNNPNT-K 601
+L + A+ E+LL + +G ++ +F + +R +I QLR G + W P K
Sbjct: 550 GSLTPIMDASIEELLEVNDVGPIVAESLHQFFAEEHNRTVIEQLRAPGKVTWPEGPPAPK 609
Query: 602 GNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKA 661
+ L K V TG+L R+ A ++E G KV +SK T+Y+V G + G KL KA
Sbjct: 610 APQGVLAGKTVVLTGTLPTLTRDAAKEMLEAAGAKVAGSVSKKTDYVVAGAEAGSKLVKA 669
Query: 662 IKLNIKILDEKNFVKIVKG 680
+L I +LDE ++++G
Sbjct: 670 EELGIPVLDEDGLHQLLEG 688
>sp|Q1LNG5|DNLJ_RALME DNA ligase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 /
DSM 2839) GN=ligA PE=3 SV=1
Length = 721
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/695 (45%), Positives = 434/695 (62%), Gaps = 35/695 (5%)
Query: 17 RVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVG 76
R L++EL R++ YY+ D P I D YD L EL+ +E ++PELLT DS TQ VG
Sbjct: 23 RAQWLREELERYSYQYYVLDAPTIPDADYDALFIELQALEAEHPELLTPDSPTQRVGGAP 82
Query: 77 GENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNEL------------------------ 112
V H M+SL+NGF DEDVI F++R L
Sbjct: 83 LSAFDSVRHRVPMLSLNNGFEDEDVINFDRRCAQGLGRATAAAPAAFATPAAPADDLFSA 142
Query: 113 ---------KLTKNIEYIAELKFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIH 163
+EY ELKFDG+A++LRYE G L QA+TRGDG GE++T N+ I
Sbjct: 143 ADAAEAAANTAGNAVEYACELKFDGLAMSLRYENGTLVQAATRGDGETGEDVTANVRTIK 202
Query: 164 KIPLVLNIKYPPELLEVRCEVLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPK 223
IPL L P +LEVR EV +Y+ DF KLN + G K F NPRNAAAG LRQL+P+
Sbjct: 203 AIPLKLR-GTAPSVLEVRGEVFMYRADFDKLNARQAESGEKTFVNPRNAAAGSLRQLDPR 261
Query: 224 INKNKILHFFAHGVGELRGMNMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKI 283
I + L FFA+GVGE+ G + P +HS +L+ + K+GL +C E V+ G L+ F++++
Sbjct: 262 ITAKRPLSFFAYGVGEMEGFDRPGTHSAMLDGFAKLGLPVCDERRVVRGAQGLLSFHREV 321
Query: 284 NIKRFNLPYEIDGVVYKINCLSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGR 343
+R LPY+IDGVVYK+N ++ Q++LGF SRAPRFALA+KF ++E T ++ I +Q+GR
Sbjct: 322 GERRDQLPYDIDGVVYKVNAIAEQEQLGFVSRAPRFALAHKFPAQEMTTTVEDIEVQVGR 381
Query: 344 TGIITPVALLKPVLIDGITITRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILS 403
TG ITPVA L PV + G+T+T ATLHNE EI RK++ IGDTV+V R+G+VIP++ + +L
Sbjct: 382 TGAITPVARLAPVFVGGVTVTNATLHNEDEIRRKDVHIGDTVIVRRAGDVIPEVVAVVLE 441
Query: 404 LRPNDSKIFKIPNICPICNSKIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNII 463
RP D++ F +P CP+C S + +E IARC+G I C AQRK L HF+ R+AM+I
Sbjct: 442 RRPADARAFVMPTECPVCGSHVERLEGEAIARCTGGLI-CAAQRKQALLHFAQRRAMDIE 500
Query: 464 GLGKKMIEKLVNANIVVTAVDLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFI 523
GLG K++E+LV+ IV T DLYK+ L LDR+++K A+N++ AI++S+ TT +RFI
Sbjct: 501 GLGDKVVEQLVDLGIVRTPADLYKLGVAKLAALDRMADKSASNLVAAIEQSRETTMNRFI 560
Query: 524 YALGIRHVGETTAKELANYFKNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLL 583
+ALGIRHVGE TAK+LA +F L+ + A E LL + +G ++ FI +P + +
Sbjct: 561 FALGIRHVGEATAKDLAKHFGKLDNLLAADEAALLEVNDVGPVVAQSIANFIAEPHNVEV 620
Query: 584 ISQLRDVGIYWLNNPNTKGNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISK 643
I QLR G++W T L K FV TG+L R +A +E G KV +SK
Sbjct: 621 IEQLRAAGVHWAETEPTARAPLPLAGKTFVLTGTLPTMSREDAKEKLEAAGAKVAGSVSK 680
Query: 644 NTNYLVKGQKPGKKLEKAIKLNIKILDEKNFVKIV 678
T+Y+V G + G KLEKA L + +LDE+ +K++
Sbjct: 681 KTDYVVAGAEAGSKLEKAQTLGVAVLDEEGMLKLL 715
>sp|Q604U8|DNLJ_METCA DNA ligase OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB
11132 / Bath) GN=ligA PE=3 SV=1
Length = 673
Score = 627 bits (1618), Expect = e-179, Method: Compositional matrix adjust.
Identities = 291/659 (44%), Positives = 436/659 (66%), Gaps = 3/659 (0%)
Query: 21 LKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVGGENS 80
L++E+ HN+ YY D+P+I+D +YD+L+ EL IE +YPEL+T DS TQ VG E
Sbjct: 14 LREEIEFHNVRYYRLDDPLITDAEYDRLMAELLAIEARYPELVTPDSPTQRVGAPPVEAF 73
Query: 81 KYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIAVNLRYEYGYL 140
V H M+SL+N FS+ED+ F++R+ EL +EY+AE K DG+AVNL Y+ G L
Sbjct: 74 TEVRHEVPMLSLENAFSEEDLTAFDRRVRKELS-RDTLEYVAEPKLDGLAVNLLYQDGVL 132
Query: 141 KQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDFIKLNKYRYH 200
+A+TRGDG +GE++T N+ + IPL L + P+ E R EV + K+ F+ LN+
Sbjct: 133 VRAATRGDGEVGEDVTHNVRAVRAIPLRLKGEDFPDRFEARGEVFMPKRGFLALNERARR 192
Query: 201 LGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMPSSHSELLNWYQKIG 260
G K F NPRNAAAG LRQL+ ++ ++ L F+A+G+G +P++ ELL Q+ G
Sbjct: 193 SGEKTFVNPRNAAAGSLRQLDARVTASRPLSFYAYGIGAFPDARLPATQHELLESLQRWG 252
Query: 261 LSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKLGFTSRAPRFA 320
L + EY V+ G +E+Y+ + +R +LPY+IDGVVYK++ L Q LGF SRAPR+A
Sbjct: 253 LPVSPEYRVVRGAAGCLEYYRSLGERRHDLPYDIDGVVYKVDDLKAQAGLGFVSRAPRWA 312
Query: 321 LAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHNESEIYRKNIQ 380
+A+KF ++EA T++ I++Q+GRTG++TPVA L+PV + G+T+T ATLHN EI RK+++
Sbjct: 313 IAHKFPAEEARTRVVGIDVQVGRTGVLTPVARLEPVFVGGVTVTNATLHNADEIRRKDVR 372
Query: 381 IGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYIESNLIARCSGSW 440
GDTV+V R+G+VIP+I + LR ++ F++P +CP C S + ++ARCSG
Sbjct: 373 PGDTVIVRRAGDVIPEIVRVVPELRKPGAEPFRMPEVCPECGSAVEAEPGEVLARCSGG- 431
Query: 441 IECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKINFKNLLRLDRVS 500
+ C AQ K ++HF+SR+AM+I GLG K++++LV ++ T DLY+++ L LDR+
Sbjct: 432 LYCPAQHKESIKHFASRRAMDIEGLGDKLVDQLVGRKLIATVADLYRLDLDRLAGLDRMG 491
Query: 501 NKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLECMFKATEEQLLNI 560
K A N+L A+++SK TT +RF+YALGIR VGE TAK L+ +F +LE + +ATEE+LL +
Sbjct: 492 EKSAANLLAALERSKRTTLARFLYALGIRDVGEVTAKVLSEHFGSLEALMEATEEELLAV 551
Query: 561 PKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGNKNYLKEKIFVFTGSLYA 620
+G + F QP +R +ISQL G+ W P K L+ +FV TG+L +
Sbjct: 552 ADVGPVVSRHIRLFFAQPHNREVISQLLACGVSW-EKPAPAPRKLPLQGLVFVLTGTLAS 610
Query: 621 FKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKILDEKNFVKIVK 679
R+EA +E LG K +S+NT+++V G +PG KL+KA +L + +LDEK F+ +++
Sbjct: 611 MSRDEARARLEALGAKCTGSVSRNTSFVVAGSEPGSKLDKASELGVPVLDEKGFLDLLE 669
>sp|A4SYV5|DNLJ_POLSQ DNA ligase OS=Polynucleobacter necessarius subsp. asymbioticus
(strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) GN=ligA
PE=3 SV=1
Length = 671
Score = 621 bits (1602), Expect = e-177, Method: Compositional matrix adjust.
Identities = 307/669 (45%), Positives = 442/669 (66%), Gaps = 5/669 (0%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
+ L+ R L+ EL R AYY+ DNP++ D +YD+L EL IE +P+ +T +SL+Q
Sbjct: 7 TNLADRYAFLQAELARLEHAYYVLDNPLLPDIEYDRLYRELLDIEAAHPQWVTSESLSQR 66
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIAV 131
VG + V H M+SL+N F D ++I F++R L + +++ Y ELKFDG+A+
Sbjct: 67 VGGTALKEFDSVTHAVPMLSLNNAFEDSELIAFDRRCREALHV-EHVAYAGELKFDGLAI 125
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+LRYE G L A+TRGDG GE++T NI I IPL L K PE+LEVR EV +Y KDF
Sbjct: 126 SLRYENGTLVTAATRGDGASGEDVTANIKTIRAIPLKLTGKNIPEILEVRGEVFMYLKDF 185
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMN-MPSSHS 250
K+N+ LG K+F NPRNAAAG LRQL+ KI + L FFA+G+G L + +P +H
Sbjct: 186 EKMNRQAAELGEKEFANPRNAAAGSLRQLDSKITAKRPLSFFAYGLGALEPQSWLPKTHE 245
Query: 251 ELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKL 310
ELLN Y ++GL +C E VL V +++ FY +I KR +LPY+IDGVVYK+N + Q KL
Sbjct: 246 ELLNAYVELGLPVCSERRVLHSVEEILAFYNEIGAKRDSLPYDIDGVVYKVNSFAEQAKL 305
Query: 311 GFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHN 370
GF SRAPRFALA+K+ ++EALT + I++Q+GRTG ITPVA L PV + G+T+T ATLHN
Sbjct: 306 GFVSRAPRFALAHKYPAQEALTTVLGIDVQVGRTGAITPVARLAPVEVGGVTVTNATLHN 365
Query: 371 ESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYIES 430
E E+ RK+++IGDTV V R+G+VIP++ S I RP+D+K F +P+ CP+C+S I +
Sbjct: 366 EDEVKRKDVRIGDTVSVRRAGDVIPEVVSVIKERRPSDAKEFVMPSRCPVCDSHIERLAD 425
Query: 431 NLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKINF 490
+ARCSG C AQRK L HF+ R+A++I GLG+K++++LV+ N+V T DLY++ F
Sbjct: 426 EAVARCSGGLF-CGAQRKQALIHFAHRRALDIEGLGEKIVDQLVDQNLVRTPADLYRLGF 484
Query: 491 KNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLECMF 550
L L+R+ K A+N++ AI +S+ TT +RFI+ALGIRHVGETTAK+LAN+++++ +
Sbjct: 485 TALANLERMGEKSADNLIQAINQSRNTTLARFIFALGIRHVGETTAKDLANHYQSMHALM 544
Query: 551 KATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGNKNYLKEK 610
A+ E+LL + +G + F+ + +R +I QL G+ + K + K
Sbjct: 545 DASVEELLTVKDVGPVVADSITSFMQEAHNREVIEQLLASGMQL--SVEEKIISAAVFGK 602
Query: 611 IFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKILD 670
FV TG+ R+EA L+E G KV +SK T+Y+V G G KL KA +L + ++D
Sbjct: 603 TFVLTGTFPTMTRDEAKDLLEKAGAKVAGSVSKKTDYVVAGTDAGSKLAKAEELGVPVID 662
Query: 671 EKNFVKIVK 679
E+ + ++K
Sbjct: 663 EEEMLNLLK 671
>sp|B1XTU0|DNLJ_POLNS DNA ligase OS=Polynucleobacter necessarius subsp. necessarius
(strain STIR1) GN=ligA PE=3 SV=1
Length = 671
Score = 620 bits (1600), Expect = e-177, Method: Compositional matrix adjust.
Identities = 309/669 (46%), Positives = 439/669 (65%), Gaps = 5/669 (0%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
+ L+ R L+ EL R AYY+ DNP++ D +YD+L EL IE +PE +T +SL+Q
Sbjct: 7 TNLAERYAFLQAELARLEHAYYVLDNPLLPDIEYDRLYRELLDIEAVHPEWVTSESLSQR 66
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIAV 131
VG + V H M+SL+N F D ++I F++R E+ +++ Y ELKFDG+A+
Sbjct: 67 VGGAALKEFDSVTHAVPMLSLNNAFEDAELIAFDRRC-REVLHAEHMAYAGELKFDGLAI 125
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+LRYE G L A+TRGDG GE++T NI I IPL L K P++LEVR EV +Y KDF
Sbjct: 126 SLRYENGLLVTAATRGDGASGEDVTANIKTIRAIPLKLTRKNIPQVLEVRGEVFMYLKDF 185
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMN-MPSSHS 250
K+N+ LG K+F NPRNAAAG LRQL+ KI + L FFA+G+G L + +P +H
Sbjct: 186 EKMNRQAAELGEKEFANPRNAAAGSLRQLDSKITAKRPLSFFAYGLGALEPQSWLPKTHE 245
Query: 251 ELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKL 310
ELLN Y ++GL +C E VL V +++ FY +I+ KR +LPY+IDGVVYK+N + Q KL
Sbjct: 246 ELLNAYIELGLPVCSERKVLHSVQEILAFYSEIDDKRDSLPYDIDGVVYKVNSFAEQAKL 305
Query: 311 GFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHN 370
GF SRAPRFALA+K+ ++EALT + I++Q+GRTG ITPVA L PV + G+T+T ATLHN
Sbjct: 306 GFASRAPRFALAHKYPAQEALTTVLGIDVQVGRTGAITPVARLAPVEVGGVTVTNATLHN 365
Query: 371 ESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYIES 430
E EI RK+++IGDTV V R+G+VIP++ S I RP D+K F++P+ CP+C+S I +
Sbjct: 366 EDEIKRKDVRIGDTVSVRRAGDVIPEVVSVIKDRRPADAKEFQMPSRCPVCDSHIERLAD 425
Query: 431 NLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKINF 490
+ARCSG C AQRK L HF+ R+AM+I GLG+K++++LV+ N+V T DLY++ F
Sbjct: 426 EAVARCSGGLF-CGAQRKQALIHFAHRRAMDIEGLGEKIVDQLVDQNLVRTPADLYRLGF 484
Query: 491 KNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLECMF 550
L L+R+ K A+N++ AI +S+ TT +RFI+ALGIRHVGETTAK+LAN+++++ +
Sbjct: 485 TALANLERMGEKSADNLIKAINQSRNTTLARFIFALGIRHVGETTAKDLANHYQSMHALM 544
Query: 551 KATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGNKNYLKEK 610
A E LL + +G + F+ + +R +I QL G+ K + K
Sbjct: 545 DAGVEDLLTVKDVGPVVADSITSFMQEAHNREVIEQLLASGMRL--AVEEKVISAAVAGK 602
Query: 611 IFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKILD 670
FV TG+ R+EA L+E G KV +SK T+Y+V G G KL KA +L + ++D
Sbjct: 603 TFVLTGTFPTMTRDEAKDLLEKAGAKVAGSVSKKTDYVVAGTDAGSKLTKAEELGVPVID 662
Query: 671 EKNFVKIVK 679
E + ++K
Sbjct: 663 EAAMLDLLK 671
>sp|C1D4R5|DNLJ_LARHH DNA ligase OS=Laribacter hongkongensis (strain HLHK9) GN=ligA PE=3
SV=1
Length = 692
Score = 602 bits (1551), Expect = e-171, Method: Compositional matrix adjust.
Identities = 288/677 (42%), Positives = 432/677 (63%), Gaps = 22/677 (3%)
Query: 15 SFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGL 74
+ R L+ LHR+N YY+ D P + D +YD+L EL+ +E +PEL + DS T+ VG
Sbjct: 7 TARAAGLRALLHRYNHEYYVLDAPSVPDAEYDRLFRELEALEAAHPELASADSPTRRVGG 66
Query: 75 VGGENSKYVHHTFKMMSLDNGFSD----------EDVIIFNKRITNELKLTKNIEYIAEL 124
V H M+SL+N FSD ++ F++R+ + L L + +EY E
Sbjct: 67 APLAAFASVTHRLPMLSLNNVFSDMQDSDPAGRHAELAAFDQRVRDGLGLDE-VEYAVEP 125
Query: 125 KFDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVL------NIKYP---P 175
KFDG+AV+L YE+G L Q +TRGDG GEN+T N+ + IPL L ++ P P
Sbjct: 126 KFDGLAVSLVYEHGVLVQGATRGDGETGENVTENLRTVRSIPLRLENAPGDDLFAPAVVP 185
Query: 176 ELLEVRCEVLIYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAH 235
LEVR EVL+ K+DF +LN + GLK+F NPRNAAAG LRQL+ +I ++ L FFA+
Sbjct: 186 ARLEVRGEVLMLKRDFERLNSEQDAAGLKRFANPRNAAAGSLRQLDSRITASRRLTFFAY 245
Query: 236 GVGELRGMNMPSSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEID 295
V E G+++P++HS ++W +GL + + SV+ G+ L Y+ + +R LP++ID
Sbjct: 246 AVAEADGVSLPATHSATMDWLAGLGLPVSRQRSVVRGLAGLTGAYEAMLAQRAGLPFDID 305
Query: 296 GVVYKINCLSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKP 355
GVVYK+N LS Q +LGF SRAPRFA+A+KF ++EALT ++ I +Q+GRTG ITPVA L+P
Sbjct: 306 GVVYKVNRLSEQARLGFVSRAPRFAVAHKFPAEEALTVVEDITVQVGRTGAITPVARLQP 365
Query: 356 VLIDGITITRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIP 415
V + G+T+T ATLHNE E+ RK++ +GDTV+V R+G+VIP++ S + RP ++ F++P
Sbjct: 366 VFVGGVTVTNATLHNEDEVRRKDVHVGDTVIVRRAGDVIPEVVSVLAERRPPQARAFEMP 425
Query: 416 NICPICNSKIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVN 475
+CP+C S I+ +ARCSG + C AQ K LQHF+SRKA+++ GLG+K++++LV+
Sbjct: 426 LVCPVCGSHIVREADEAVARCSGG-LYCSAQHKQALQHFASRKALDVEGLGEKLVDQLVD 484
Query: 476 ANIVVTAVDLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETT 535
A +V T DL+ ++ L RL+R+ +K A N++ A+ + TT +RF+YALGIR+VGE T
Sbjct: 485 AGLVHTPADLFALDQPALARLERMGDKSAENLVRALDACRHTTLARFVYALGIRNVGEAT 544
Query: 536 AKELANYFKNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYW- 594
A++LA +F L+ + A ++ L+ P +G ++ + F + +R ++ L G+ W
Sbjct: 545 ARDLARHFGTLDALMAADQDMLMTAPDVGPIVARSIVDFFAEAHNREVVDALLAAGVSWP 604
Query: 595 LNNPNTKGNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKP 654
+ T + K FV TG+L R++A IE GGKV +SK T+Y+V G+
Sbjct: 605 VVETVTSAGVAGVSGKTFVLTGTLPTLGRDDAKARIEAAGGKVTGSVSKKTHYVVAGEAA 664
Query: 655 GKKLEKAIKLNIKILDE 671
G KL+KA +L I +LDE
Sbjct: 665 GSKLDKAHELGITVLDE 681
>sp|Q12AD4|DNLJ_POLSJ DNA ligase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=ligA
PE=3 SV=1
Length = 706
Score = 601 bits (1549), Expect = e-171, Method: Compositional matrix adjust.
Identities = 301/687 (43%), Positives = 429/687 (62%), Gaps = 21/687 (3%)
Query: 17 RVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVG 76
R+ L+ ELH H YY+ D P I D++YD+L EL+ +E YPELLT DS TQ VG
Sbjct: 22 RMAALRAELHAHAHRYYVLDEPTIPDSEYDRLFKELQDLEAAYPELLTPDSPTQRVGGKP 81
Query: 77 GENSKYVHHTFKMMSLDNGFSDEDVII--FNKRITNELKLTKN---IEYIAELKFDGIAV 131
+ V H M+S+ E F+ R+ EL LT++ +EY+AELKFDG+A+
Sbjct: 82 LDQFASVRHKVPMLSIRTETDTEATGAQNFDTRVRKELGLTESNPPVEYVAELKFDGLAM 141
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+LRYE+G L QA+TRGDG +GE +T NI I +IPL L PP +LEVR EV + + DF
Sbjct: 142 SLRYEHGVLVQAATRGDGEVGEEVTQNIRTIRQIPLKLPSDAPP-VLEVRGEVYMRRADF 200
Query: 192 IKLN-KYRYHL-----GLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGEL---RG 242
LN K R + G K F NPRNAAAG +RQL+P I + L FFA+GVGE+
Sbjct: 201 EALNDKQREKIAAGAKGEKTFVNPRNAAAGAVRQLDPAIAAQRPLSFFAYGVGEVVLEAE 260
Query: 243 MNMP-----SSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGV 297
P ++H ELL + G + + + G ++LI F++ + +R +LPY+IDGV
Sbjct: 261 QANPKNPWVATHMELLQALKSWGFPVAAQTKIAHGASELIAFHQAMGQQRDSLPYDIDGV 320
Query: 298 VYKINCLSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVL 357
VYK+N L+ QK++GF SR PR+A+A+K+ ++E LT + I +Q+GRTG +TPVA L PV
Sbjct: 321 VYKVNSLALQKQMGFVSREPRWAVAHKYPAQEQLTTVLGIEVQVGRTGKLTPVAKLAPVF 380
Query: 358 IDGITITRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNI 417
+ G+T+T ATLHNE E RK++++GDTV+V R+G+VIP++ S + R + +F +P
Sbjct: 381 VGGVTVTNATLHNEDEARRKDVRVGDTVIVRRAGDVIPEVVSVLPDKRLPGAPMFTMPRQ 440
Query: 418 CPICNSKIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNAN 477
CP+C S + E RC+G C AQRK + H++ R+A+ I GLG K++E+LV+AN
Sbjct: 441 CPVCGSDAVREEGEADYRCTGGLF-CGAQRKEAILHYAHRRAVEIEGLGDKLVEQLVDAN 499
Query: 478 IVVTAVDLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAK 537
++ T DLYK+ L LDR++ K ANN+L A++KSK TT RF++ LGIRHVGE TAK
Sbjct: 500 VIRTLPDLYKLGLTALASLDRMAEKSANNLLKALEKSKQTTLPRFLFGLGIRHVGEATAK 559
Query: 538 ELANYFKNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNN 597
ELA +F NL+ + AT+EQLL + +GS ++ F +QP +R ++ QLR G++W
Sbjct: 560 ELARHFGNLDAIMDATQEQLLAVSDVGSIVAQSIRTFFDQPHNREVVEQLRACGVHWEEG 619
Query: 598 PNTKGNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKK 657
L K FV TG+L R+EA +E GGKV +SK T+Y+V G + G K
Sbjct: 620 EPAAVAPKPLSGKTFVITGTLPTLSRDEAKDKVEAAGGKVAGSVSKKTDYVVAGTEAGSK 679
Query: 658 LEKAIKLNIKILDEKNFVKIVKGFSTE 684
L KA +L I ++DE ++++ E
Sbjct: 680 LVKAQELGIAVIDEAALMRLLASAEAE 706
>sp|B8GTL0|DNLJ_THISH DNA ligase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=ligA PE=3
SV=1
Length = 675
Score = 599 bits (1545), Expect = e-170, Method: Compositional matrix adjust.
Identities = 282/668 (42%), Positives = 423/668 (63%), Gaps = 3/668 (0%)
Query: 13 KLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHV 72
K+ RV L+ EL HN YY+ D+P I D YD L+ EL+ +E KYPEL+T DS TQ V
Sbjct: 7 KVRKRVASLRDELDYHNHRYYVLDDPEIPDAAYDALMRELQDLEAKYPELVTPDSPTQRV 66
Query: 73 GLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIAVN 132
G + + H M+SLDN F + DV+ F KRI + L IE+ E K DG+A++
Sbjct: 67 GGAPLKAFEEARHLLPMLSLDNAFEEADVLAFEKRIRDRLGEESEIEFAVEPKLDGLAIS 126
Query: 133 LRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDFI 192
L YE G+L + +TRGDG GE++T N+ I IPL L + P+LLEVR EV + + F
Sbjct: 127 LLYEDGHLVRGATRGDGATGEDVTANVRTIRAIPLRLQGRGWPKLLEVRGEVYMDRAGFE 186
Query: 193 KLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMPSSHSEL 252
N+ G K F NPRNAAAG LRQL+ +I + L FFA+G G + G +P +H+ +
Sbjct: 187 AFNREAASRGEKVFVNPRNAAAGSLRQLDSRITAKRPLTFFAYGAGHVEGGELPDTHAAV 246
Query: 253 LNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKLGF 312
L+ + G +C E V++G +E+Y++I +R LPY+IDGVVYK+N Q++LGF
Sbjct: 247 LDALAEWGQRVCPERDVVTGAAGCLEYYRRIGERRDGLPYDIDGVVYKVNRFELQQRLGF 306
Query: 313 TSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHNES 372
SRAPR+A+A+K+ ++E +T ++ + Q+GRTG +TPVA L+PV + G+T++ ATLHN
Sbjct: 307 VSRAPRWAIAHKYPAQEQMTLLRDVEFQVGRTGALTPVARLEPVFVGGVTVSNATLHNMD 366
Query: 373 EIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYIESNL 432
E+ RK+++IGDTV+V R+G+VIP++ + +LS RP++++ +P CP+C S+I+ E
Sbjct: 367 EVERKDVRIGDTVIVRRAGDVIPEVAAVVLSRRPHNARHVVMPTHCPVCGSEIVRSEGEA 426
Query: 433 IARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKINFKN 492
+ARCSG + C AQR+ ++HF+SR+AM+I GLG K++E+LV+A +V LY++ +
Sbjct: 427 VARCSGG-LYCAAQRREAIKHFASRRAMDIEGLGDKLVEQLVDAGLVDHVDGLYRLTAEQ 485
Query: 493 LLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLECMFKA 552
L L+R+ K A+N++ A++KSK T +RFI+ALGIR VGE TA+ LA +F L+ + A
Sbjct: 486 LAGLERMGEKSAHNLVDALEKSKHTQLARFIFALGIREVGEATARALAIHFGGLDALMAA 545
Query: 553 TEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNT--KGNKNYLKEK 610
EE L+ +P +G F QP +R +I LR+ G++W + + L
Sbjct: 546 DEEALMQVPDVGPVVAHHVATFFQQPHNREVIDALREAGVHWEESEPAALQAEDLPLSGN 605
Query: 611 IFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKILD 670
+V TG+L + R EA + LG KV +SK T ++ G+ G KL KA KL + +L
Sbjct: 606 TYVLTGALESMTREEAGDRLMALGAKVSGSVSKKTTAVIAGEAAGSKLAKAEKLGVPVLS 665
Query: 671 EKNFVKIV 678
E F++++
Sbjct: 666 EAEFLELI 673
>sp|Q7VRX7|DNLJ_BORPE DNA ligase OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589
/ NCTC 13251) GN=ligA PE=3 SV=1
Length = 696
Score = 598 bits (1541), Expect = e-170, Method: Compositional matrix adjust.
Identities = 292/684 (42%), Positives = 430/684 (62%), Gaps = 32/684 (4%)
Query: 18 VTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVGG 77
+ L+ E+ +HNI YY++D+P + D +YD L+ +L+ +E ++PEL+T DS TQ VG
Sbjct: 12 IARLRAEIEQHNIRYYVHDDPSVPDAEYDALMRDLQALEAEHPELVTPDSPTQRVGAAPL 71
Query: 78 ENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK------LTKNIEYIAELKFDGIAV 131
V H M+SL N F +EDV F+KR+ + L+ L + +EY ELK DG+A+
Sbjct: 72 AEFGSVRHAVPMLSLGNAFDEEDVRAFDKRVADTLRGAGLLGLDQQVEYFCELKLDGLAI 131
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+LRYE G L QA+TRGDG GE++T NI I +PL L+ P +LEVR EVL+ + +F
Sbjct: 132 SLRYEEGRLAQAATRGDGQTGEDVTANIRTIKGVPLRLHGA--PRVLEVRGEVLMNRAEF 189
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM--NMPS-- 247
+LN+ + G K F NPRNAAAG LRQL+P+I + L FFA+ GE+ G+ MP+
Sbjct: 190 ERLNRTQAARGEKVFVNPRNAAAGSLRQLDPRITAQRPLRFFAYSWGEVHGLPEGMPTRF 249
Query: 248 ----------------SHSELLNWYQKIGLSICGEYSVLS-GVNKLIEFYKKINIKRFNL 290
+H +L+W ++GL + ++ G + L+ FY++I R +L
Sbjct: 250 DEPAPGVRVASTLPRDTHGGMLDWLAELGLPVNLRHNHRERGADGLLAFYERIGKLRADL 309
Query: 291 PYEIDGVVYKINCLSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPV 350
PY+IDGVVYK++ L +Q+ LGF +RAPRFALA+KF ++EA+T++ I +Q+GRTG ITPV
Sbjct: 310 PYDIDGVVYKVDALPSQRVLGFVARAPRFALAHKFPAEEAVTQLLGIEVQVGRTGAITPV 369
Query: 351 ALLKPVLIDGITITRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSK 410
A L PV + G+T+T ATLHNE EI RK+++IGDTV+V R+G+VIP++ +L RP D++
Sbjct: 370 ARLAPVFVGGVTVTNATLHNEDEIRRKDVRIGDTVIVRRAGDVIPEVVGPVLEKRPADAR 429
Query: 411 IFKIPNICPICNSKIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMI 470
F + CPIC S I ES IARC+G C AQRK L H + RKA++I GLG+K+I
Sbjct: 430 EFVMLTACPICGSAIERPESEAIARCTGGLF-CAAQRKQTLLHAAGRKALDIEGLGEKLI 488
Query: 471 EKLVNANIVVTAVDLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRH 530
++LV+A+ V + D+Y + L L+R+ K A N++ AI +++ R ++ALGIRH
Sbjct: 489 DQLVDADRVKSLADIYSLTAFELAALERMGKKSAENLVAAIDQARRPALGRLLFALGIRH 548
Query: 531 VGETTAKELANYFKNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDV 590
VGETTA+++A +F ++E + A+EE LL +P +G + +F +P +R ++ QL
Sbjct: 549 VGETTARDVARHFGSMERIMDASEEALLAVPDVGGVVAGSIRRFFAEPHNREIVEQLTQQ 608
Query: 591 GIYWLNNPNTKGNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVK 650
G++ +G L K FV TG++ + R+EA I GGKV +SK T YLV
Sbjct: 609 GVHPQAEAEPEGTS--LAGKTFVLTGTMPNWTRDEATRRILAAGGKVSGSVSKKTAYLVT 666
Query: 651 GQKPGKKLEKAIKLNIKILDEKNF 674
G+ G KL KA +L + +LDE
Sbjct: 667 GEDAGSKLTKAQELGVPVLDEDGL 690
>sp|Q7WCJ7|DNLJ_BORBR DNA ligase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC
13252 / RB50) GN=ligA PE=3 SV=1
Length = 696
Score = 596 bits (1536), Expect = e-169, Method: Compositional matrix adjust.
Identities = 291/684 (42%), Positives = 429/684 (62%), Gaps = 32/684 (4%)
Query: 18 VTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVGG 77
+ L+ E+ +HNI YY++D+P + D +YD L+ +L+ +E ++PEL+T DS TQ VG
Sbjct: 12 IARLRAEIEQHNIRYYVHDDPSVPDAEYDALMRDLQALEAEHPELVTPDSPTQRVGAAPL 71
Query: 78 ENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK------LTKNIEYIAELKFDGIAV 131
V H M+SL N F +EDV F+KR+ + L+ L + +EY ELK DG+A+
Sbjct: 72 AEFGSVRHAVPMLSLGNAFDEEDVRAFDKRVADTLRGAGLLGLDQQVEYFCELKLDGLAI 131
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+LRYE G L QA+TRGDG GE++T NI I +PL L+ P +LEVR EVL+ + +F
Sbjct: 132 SLRYEEGRLAQAATRGDGQTGEDVTANIRTIKGVPLRLHGA--PRVLEVRGEVLMNRAEF 189
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM--NMPS-- 247
+LN+ + G K F NPRNAAAG LRQL+P+I + L FFA+ GE+ G+ MP+
Sbjct: 190 ERLNRTQAARGEKVFVNPRNAAAGSLRQLDPRITAQRPLRFFAYSWGEVHGLPEGMPTRF 249
Query: 248 ----------------SHSELLNWYQKIGLSICGEYSVLS-GVNKLIEFYKKINIKRFNL 290
+H +L+W ++GL + ++ G + L+ FY++I R +L
Sbjct: 250 DEPAPGVRVASTLPRDTHGGMLDWLAELGLPVNLRHNHRERGADGLLAFYERIGKLRADL 309
Query: 291 PYEIDGVVYKINCLSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPV 350
PY+IDGVVYK++ L +Q+ LGF +RAPRFALA+KF ++EA+T++ I +Q+GRTG ITPV
Sbjct: 310 PYDIDGVVYKVDALPSQRVLGFVARAPRFALAHKFPAEEAVTQLLGIEVQVGRTGAITPV 369
Query: 351 ALLKPVLIDGITITRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSK 410
A L PV + G+T+T ATLHNE EI RK+++IGDTV+V R+G+VIP++ +L RP D++
Sbjct: 370 ARLAPVFVGGVTVTNATLHNEDEIRRKDVRIGDTVIVRRAGDVIPEVVGPVLEKRPADAR 429
Query: 411 IFKIPNICPICNSKIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMI 470
F + CPIC S I E IARC+G C AQRK L H + RKA++I GLG+K+I
Sbjct: 430 EFVMLTACPICGSAIERPEGEAIARCTGGLF-CAAQRKQTLLHAAGRKALDIEGLGEKLI 488
Query: 471 EKLVNANIVVTAVDLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRH 530
++LV+A+ V + D+Y + L L+R+ K A N++ AI +++ R ++ALGIRH
Sbjct: 489 DQLVDADRVKSLADIYSLTAFELAALERMGKKSAENLVAAIDQARRPALGRLLFALGIRH 548
Query: 531 VGETTAKELANYFKNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDV 590
VGETTA+++A +F ++E + A+EE LL +P +G + +F +P +R ++ QL
Sbjct: 549 VGETTARDVARHFGSMERIMDASEEALLAVPDVGGVVAGSIRRFFAEPHNREIVEQLTQQ 608
Query: 591 GIYWLNNPNTKGNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVK 650
G++ +G L K FV TG++ + R+EA I GGKV +SK T YLV
Sbjct: 609 GVHPQAEAEPEGTS--LAGKTFVLTGTMPNWTRDEATRRILAAGGKVSGSVSKKTAYLVT 666
Query: 651 GQKPGKKLEKAIKLNIKILDEKNF 674
G+ G KL KA +L + +LDE
Sbjct: 667 GEDAGSKLTKAQELGVPVLDEDGL 690
>sp|Q47FA0|DNLJ_DECAR DNA ligase OS=Dechloromonas aromatica (strain RCB) GN=ligA PE=3
SV=1
Length = 683
Score = 593 bits (1530), Expect = e-168, Method: Compositional matrix adjust.
Identities = 288/670 (42%), Positives = 420/670 (62%), Gaps = 9/670 (1%)
Query: 17 RVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVG 76
R + EL RH+ AYY+ D P I D +YD+L EL+++E++YPELLT DS T VG V
Sbjct: 10 RAAWYRSELERHSYAYYVLDAPTIPDTEYDKLFRELQELEQQYPELLTADSPTHRVGGVP 69
Query: 77 GENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIAVNLRYE 136
+ H M+SL+N F+ E+V F+KRI + L+ ++Y E KFDG+A++L YE
Sbjct: 70 LKEFPPRQHGVPMLSLNNAFAPEEVEAFDKRIRDGLETIAAVDYAVEPKFDGLAISLTYE 129
Query: 137 YGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDFIKLNK 196
G +TRGDG GE +T N+ + IPL L + P L+E+R EVL++K DF +LN
Sbjct: 130 NGVFTCGATRGDGVTGEEVTPNLRTLRCIPLRLRGEGWPALIEIRGEVLMFKADFAELNA 189
Query: 197 YRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMPSSHSELLNWY 256
+ G K+F NPRNAAAG LRQL+ KI + L FFA+GVG +H E++
Sbjct: 190 RQRERGDKEFANPRNAAAGSLRQLDSKITAGRPLSFFAYGVGAGADALAVKTHGEMMGLL 249
Query: 257 QKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKLGFTSRA 316
G + E V+ GV L+ ++ +I +KR LPY+IDGVVYK+N L Q +LGF SRA
Sbjct: 250 AAWGFPVAEERRVVQGVRGLLGYFVEIGVKRPGLPYDIDGVVYKVNRLDWQAQLGFVSRA 309
Query: 317 PRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHNESEIYR 376
PRFA+A+KF ++EALT++ I++Q+GRTG ITPVA LKPV + G+T+T ATLHNE E+ R
Sbjct: 310 PRFAIAHKFPAEEALTEVLGIDVQVGRTGAITPVARLKPVFVGGVTVTNATLHNEDEVRR 369
Query: 377 KNIQIGDTVVVHRSGNVIPKITSSILSLRPNDS--------KIFKIPNICPICNSKIIYI 428
K++++GDTV+V R+G+VIP++ + + RP F++P CP C S ++
Sbjct: 370 KDVRLGDTVIVRRAGDVIPEVVAIVPEKRPMRDLFGSEPLNPPFELPATCPECGSAVVKG 429
Query: 429 ESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKI 488
+ IARC+G + C AQRK L HF++R+AM+I GLG K++++LV+A +V + DLY +
Sbjct: 430 DDEAIARCTGG-LYCPAQRKQALWHFAARRAMDIEGLGDKLVDQLVDAGLVHSPADLYGL 488
Query: 489 NFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLEC 548
+ L L+R+ K A N++ AI KS+ TT +RFI+ LGIR+VGE TA++LA +F L+
Sbjct: 489 TVETLAGLERMGEKSAQNLVAAIDKSRQTTLARFIFGLGIRNVGEATARDLAKHFGGLDA 548
Query: 549 MFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGNKNYLK 608
+ A L +P +G ++ F + +R +I LR G+ W + L
Sbjct: 549 LLAADSAALQMVPDVGPVVAESLAAFFAEAHNREVIDGLRRAGVSWPEGEPAQAGPQLLA 608
Query: 609 EKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKI 668
K V TG+L KR+EA L+E GGKV +SK T+Y+V G++ G KLEKA +L + +
Sbjct: 609 GKTLVLTGTLPTLKRDEAKALVEAAGGKVAGSVSKKTDYVVAGEEAGSKLEKAQELGVPV 668
Query: 669 LDEKNFVKIV 678
+DE +K++
Sbjct: 669 IDEAELMKLL 678
>sp|Q1H1G6|DNLJ_METFK DNA ligase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875) GN=ligA PE=3 SV=1
Length = 693
Score = 593 bits (1528), Expect = e-168, Method: Compositional matrix adjust.
Identities = 292/679 (43%), Positives = 436/679 (64%), Gaps = 14/679 (2%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
+ L+ +V L+ + R++ YY+ + P + D++YD++ ELK +E+ +PEL+T DS TQ
Sbjct: 15 AGLAEKVEALRATIRRYDYEYYVLNAPSVPDSEYDRVFRELKALEDAHPELVTPDSPTQR 74
Query: 72 VGLVGGENSKYVHHTFKMMSLDN--GFSDEDVIIFNKRITNELKLTKN---IEYIAELKF 126
VG V H M+S++ + + F+ R+ +L L IEY AELKF
Sbjct: 75 VGGAAMAELMPVRHHVPMLSIETETDTTPQGAYNFDARVRKKLGLLPEDGPIEYAAELKF 134
Query: 127 DGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLI 186
DG+A++LRYE+G L QA+TRGDG +GE++T NI + +IPL L+ + P E+LEVR EV +
Sbjct: 135 DGLAMSLRYEHGLLVQAATRGDGEVGEDVTHNIRTMRQIPLQLHGEAP-EVLEVRGEVYM 193
Query: 187 YKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMP 246
+ DF + N + G NPRN AAG +RQL+P++ + L FFA+G+GE +G +P
Sbjct: 194 SRPDFERYNARQREHGKPTLVNPRNGAAGSIRQLDPRLAAQRPLSFFAYGLGETKGWQVP 253
Query: 247 SSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLST 306
+H+++L+ + +GL +C E +V G L F++ I+ KR LPY+IDGVVYK+N L
Sbjct: 254 LTHAQVLDALKALGLPVCNERAVGMGAEALAAFHQAISAKRDQLPYDIDGVVYKVNRLDL 313
Query: 307 QKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRA 366
Q++LGF SR P +A+A+KF ++E +T ++ I++Q+GRTG ITPVA LKPV + G+T+T A
Sbjct: 314 QRELGFRSREPNWAVAHKFPAQEEMTVLEHIDVQVGRTGAITPVARLKPVFVGGVTVTNA 373
Query: 367 TLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIF----KIPNICPICN 422
TLHN+ EI RK+++IGDTVVV R+G+VIP++ S I RP S+ + I +CP+C
Sbjct: 374 TLHNQDEIDRKDVRIGDTVVVRRAGDVIPEVVSVIKERRPAGSQPYILLDAIGGLCPVCG 433
Query: 423 SKIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTA 482
S + + RC+G C AQRK + HF+SR+AM+I GLG+K++++LV+ N+V T
Sbjct: 434 SHAVRLPEEAAVRCTGGLF-CAAQRKQAILHFASRRAMDIEGLGEKLVDQLVDQNMVETL 492
Query: 483 VDLY---KINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKEL 539
DLY KIN + L LDR++ K A N+L A+QKSK T +RFIYALGIR+VGE TAK+L
Sbjct: 493 ADLYDPGKINLETLSGLDRMAMKSAQNLLDALQKSKQATLNRFIYALGIRNVGEATAKDL 552
Query: 540 ANYFKNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPN 599
A +F L+ + A + L +P +G ++ +F + +R +I +LRD GI+W
Sbjct: 553 ARHFGRLDALQAADVDTLQQVPDVGPVVARSIAEFFAEEHNREVIRKLRDAGIHWSETDG 612
Query: 600 TKGNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLE 659
+ + L+ K FV TG+L R+EA IE GGKV +SK T+Y+V G G KL
Sbjct: 613 QPASSSKLEGKTFVLTGTLPTMSRDEAKEKIEAAGGKVSGSVSKKTSYVVAGSDAGSKLA 672
Query: 660 KAIKLNIKILDEKNFVKIV 678
KA +L + ILDE+ + ++
Sbjct: 673 KAQELGLAILDEEGLLSLL 691
>sp|Q7W0T4|DNLJ_BORPA DNA ligase OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587
/ NCTC 13253) GN=ligA PE=3 SV=1
Length = 696
Score = 592 bits (1526), Expect = e-168, Method: Compositional matrix adjust.
Identities = 290/684 (42%), Positives = 428/684 (62%), Gaps = 32/684 (4%)
Query: 18 VTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVGG 77
+ L+ E+ +HNI YY++D+P + D +YD L+ +L+ +E ++PEL+T DS TQ VG
Sbjct: 12 IARLRAEIEQHNIRYYVHDDPSVPDAEYDALMRDLQALEAEHPELVTPDSPTQRVGAAPL 71
Query: 78 ENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK------LTKNIEYIAELKFDGIAV 131
V H M+SL N F +EDV F+KR+ + L+ L + +EY ELK DG+A+
Sbjct: 72 AEFGSVRHAVPMLSLGNAFDEEDVRAFDKRVADTLRGAGLLGLDQQVEYFCELKLDGLAI 131
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+L YE G L QA+TRGDG GE++T NI I +PL L+ P +LEVR EVL+ + +F
Sbjct: 132 SLCYEEGRLAQAATRGDGQTGEDVTANIRTIKGVPLRLHGA--PRVLEVRGEVLMNRAEF 189
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM--NMPS-- 247
+LN+ + G K F NPRNAAAG LRQL+P+I + L FFA+ GE+ G+ MP+
Sbjct: 190 ERLNRTQAARGEKVFVNPRNAAAGSLRQLDPRITAQRPLRFFAYSWGEVHGLPEGMPTRF 249
Query: 248 ----------------SHSELLNWYQKIGLSICGEYSVLS-GVNKLIEFYKKINIKRFNL 290
+H +L+W ++GL + ++ G + L+ FY++I R +L
Sbjct: 250 DEPAPGVRVASTLPRDTHGGMLDWLAELGLPVNLRHNHRERGADGLLAFYERIGKLRADL 309
Query: 291 PYEIDGVVYKINCLSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPV 350
PY+IDGVVYK++ L +Q+ LGF +RAPRFALA+KF ++EA+T++ I +Q+GRTG ITPV
Sbjct: 310 PYDIDGVVYKVDALPSQRVLGFVARAPRFALAHKFPAEEAVTQLLGIEVQVGRTGAITPV 369
Query: 351 ALLKPVLIDGITITRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSK 410
A L PV + G+T+T ATLHNE EI RK+++IGDTV+V R+G+VIP++ +L RP D++
Sbjct: 370 ARLAPVFVGGVTVTNATLHNEDEIRRKDVRIGDTVIVRRAGDVIPEVVGPVLEKRPADAR 429
Query: 411 IFKIPNICPICNSKIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMI 470
F + CPIC S I E IARC+G C AQRK L H + RKA++I GLG+K+I
Sbjct: 430 EFVMLTACPICGSAIERPEGEAIARCTGGLF-CAAQRKQTLLHAAGRKALDIEGLGEKLI 488
Query: 471 EKLVNANIVVTAVDLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRH 530
++LV+A+ V + D+Y + L L+R+ K A N++ AI +++ R ++ALGIRH
Sbjct: 489 DQLVDADRVKSLADIYSLTAFELAALERMGKKSAENLVAAIDQARRPALGRLLFALGIRH 548
Query: 531 VGETTAKELANYFKNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDV 590
VGETTA+++A +F ++E + A+EE LL +P +G + +F +P +R ++ QL
Sbjct: 549 VGETTARDVARHFGSMERIMDASEEALLAVPDVGGVVAGSIRRFFAEPHNREIVEQLTQQ 608
Query: 591 GIYWLNNPNTKGNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVK 650
G++ +G L K FV TG++ + R+EA I GGKV +SK T YLV
Sbjct: 609 GVHPQAEAEPEGTS--LAGKTFVLTGTMPNWTRDEATRRILAAGGKVSGSVSKKTAYLVT 666
Query: 651 GQKPGKKLEKAIKLNIKILDEKNF 674
G+ G KL KA +L + +LDE
Sbjct: 667 GEDAGSKLTKAQELGVPVLDEDGL 690
>sp|Q21WC8|DNLJ_RHOFD DNA ligase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118) GN=ligA PE=3 SV=1
Length = 690
Score = 591 bits (1523), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/674 (42%), Positives = 419/674 (62%), Gaps = 11/674 (1%)
Query: 18 VTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVGG 77
V +L++ LH H YY+ D P I D +YD++ EL+ IE ++PEL+T DS TQ VG
Sbjct: 19 VAQLRRALHEHAHHYYVEDAPTIPDAEYDRMFQELQAIEAQHPELITPDSPTQRVGGRAL 78
Query: 78 ENSKYVHHTFKMMSLDNGFSDEDVII--FNKRITNELKLTKN---IEYIAELKFDGIAVN 132
E V H M+S+ E F+ R+ EL L + + Y+AE KFDG+A+N
Sbjct: 79 EQFASVRHAVPMLSIRTETDTEASGARNFDTRVRRELGLDEAAPAVAYVAEPKFDGLAMN 138
Query: 133 LRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDFI 192
LRYE G L QA+TRGDG +GE++T N+ I +IPL L P +LEVR EV + + DF
Sbjct: 139 LRYESGILVQAATRGDGEVGEDVTQNVRTIGQIPLRLPADAP-SILEVRGEVYMRRDDFE 197
Query: 193 KLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGEL----RGMNMPSS 248
KLN+ + G K F NPRNAAAG +RQL+P I + L FFA+G+GE+ G +
Sbjct: 198 KLNEQQRARGQKTFVNPRNAAAGAVRQLDPAIAAQRPLSFFAYGLGEVTPEQAGGPAFGT 257
Query: 249 HSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQK 308
H ELL + G + + G +L+ +Y+ I +R LP++IDGVVYK+N L+ Q+
Sbjct: 258 HYELLQALKTWGFPVSALVGLAQGATELVAYYESIARQRDALPFDIDGVVYKVNSLALQR 317
Query: 309 KLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATL 368
++GF +R PR+A+A+KF ++E T + I++Q+GRTG +TPVA L PV + G+T+T ATL
Sbjct: 318 RMGFVTREPRWAVAHKFPAQEQFTTVLDIDVQVGRTGKLTPVAKLAPVFVGGVTVTNATL 377
Query: 369 HNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYI 428
HNE E RK++++GDTV+V R+G+VIP++ S +L R + F +P CP+C S +
Sbjct: 378 HNEDEARRKDVRVGDTVIVRRAGDVIPEVVSVLLDKRQPGATEFTMPRQCPVCGSAAVRE 437
Query: 429 ESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKI 488
E + RC+G C AQRK + HF+ R+A+ + GLG+K++++LV+ +++ DLY++
Sbjct: 438 EGEVDYRCTGGLF-CSAQRKQAILHFAQRRAVEVEGLGEKLVDQLVDGHVIRILPDLYRL 496
Query: 489 NFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLEC 548
L LDR+++K A NIL A++KSK TT RF++ LGIRHVGE TAKELA +F +L+
Sbjct: 497 GLTALASLDRMADKSAQNILQALEKSKQTTLPRFLFGLGIRHVGEATAKELARHFGSLDA 556
Query: 549 MFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGNKNYLK 608
+ A+ EQLL + IG ++ F +QP +R ++ QLR G+ W P L
Sbjct: 557 VMDASLEQLLQVNDIGPIVAQSLRTFFDQPHNREVVEQLRACGVTWQEGPPAPVTPTPLS 616
Query: 609 EKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKI 668
K FV TG+L + R+EA LIE GGKV +SK T ++V G + G KL KA +L + +
Sbjct: 617 GKTFVITGTLPSMSRDEAKDLIEAAGGKVAGSVSKKTTFVVAGTEAGSKLTKAQELGVAV 676
Query: 669 LDEKNFVKIVKGFS 682
LDE +++ G S
Sbjct: 677 LDEAGLKELLDGHS 690
>sp|Q82TW6|DNLJ_NITEU DNA ligase OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC
14298) GN=ligA PE=3 SV=1
Length = 681
Score = 587 bits (1514), Expect = e-167, Method: Compositional matrix adjust.
Identities = 288/674 (42%), Positives = 430/674 (63%), Gaps = 11/674 (1%)
Query: 17 RVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVG 76
R+ L+ + H+ YY+ D P+I D +YD L L+++E++YP L+T DS TQ VG
Sbjct: 10 RLQALRAAIALHDFHYYVQDAPVIPDAEYDALFRTLQQLEQQYPHLVTPDSPTQRVGAPP 69
Query: 77 GENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIAVNLRYE 136
+ + H M+SL N FS+E+V F++RI L + + ++Y E KFDG+A++L Y
Sbjct: 70 LKVFAQLTHQTPMLSLANAFSEEEVTAFDRRIREALNIDR-VDYAVEPKFDGLAISLIYA 128
Query: 137 YGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDFIKLNK 196
G L + +TRGDG GE+IT N+ I IPL L + +P EVR EV++ K DF +LN+
Sbjct: 129 NGILTKGATRGDGYTGEDITLNLRTIPSIPLRLQVPFPTGQFEVRGEVVMLKTDFERLNE 188
Query: 197 YRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMP--SSHSELLN 254
+ G K F NPRNAAAG LRQL+ +I + L FFA+G+G + P S+HSE+L
Sbjct: 189 QQRKNGEKTFVNPRNAAAGSLRQLDSRITAMRRLTFFAYGIGAYH-EDQPIFSTHSEILA 247
Query: 255 WYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKLGFTS 314
+ + + S + G N L+ +Y+++N R +LPYEIDGVVYK+N L+ Q+KLG+ S
Sbjct: 248 YLATQQFLVARQSSTVMGANGLLAYYREMNAVRLSLPYEIDGVVYKVNDLAQQEKLGYVS 307
Query: 315 RAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHNESEI 374
RAPRFA+A+KF ++E T++ AI IQ+GRTG +TPVA L PV + G+T+T ATLHNE E+
Sbjct: 308 RAPRFAIAHKFPAQEVSTELLAIEIQVGRTGALTPVARLAPVFVGGVTVTNATLHNEDEV 367
Query: 375 YRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYIESNLIA 434
RK I IGDTV+V R+G+VIP++ + I+ RP ++ F +P+ CP+C SK + + +
Sbjct: 368 QRKQIMIGDTVIVRRAGDVIPEVVAVIVERRPTHAQAFVMPDHCPVCGSKAVRLPDEAVT 427
Query: 435 RCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKINFKNLL 494
RC+G + C AQRK + HF+SR+A++I GLG+K++++L++ +V T DLY+++ L
Sbjct: 428 RCTGG-LYCPAQRKQAILHFASRRAIDIDGLGEKLVDQLIDRELVHTPADLYRLDIDTLA 486
Query: 495 RLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLECMFKATE 554
L+R++ K A N++ AI+ SK TT RFIYALGIRHVGE TAK LA++ +L+ +
Sbjct: 487 GLERMAGKSARNLVTAIEDSKKTTLPRFIYALGIRHVGEATAKALASHTGDLDRLMDMNA 546
Query: 555 EQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYW-----LNNPNTKGNKNYLKE 609
EQL IP IG ++ F ++ +R +I QL G+ W + P+++ N +
Sbjct: 547 EQLQQIPDIGPIVAQSIADFFSEAHNREVIEQLLSCGLQWEKPSHIAQPSSRTNLA-VPG 605
Query: 610 KIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKIL 669
K FV TG+L R++A IE GGKV +S T+Y+V G PG K +AI+L I +L
Sbjct: 606 KTFVLTGTLPTMTRDQAKNRIEQQGGKVTGSVSSATSYVVAGSDPGSKYARAIELGIPVL 665
Query: 670 DEKNFVKIVKGFST 683
DE + +++ S+
Sbjct: 666 DEDQLLSLLRDTSS 679
>sp|A1K713|DNLJ_AZOSB DNA ligase OS=Azoarcus sp. (strain BH72) GN=ligA PE=3 SV=1
Length = 693
Score = 586 bits (1511), Expect = e-166, Method: Compositional matrix adjust.
Identities = 288/665 (43%), Positives = 418/665 (62%), Gaps = 12/665 (1%)
Query: 24 ELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVGGENSKYV 83
E+ RHN AYY+ D P I D +YD+L EL+ IE +PELLT DS TQ VG V
Sbjct: 17 EIARHNHAYYVLDTPTIPDAEYDRLFRELQDIEAAHPELLTPDSPTQRVGGAPLPELVPV 76
Query: 84 HHTFKMMSL--DNGFSDEDVIIFNKRITNELKLTKN---IEYIAELKFDGIAVNLRYEYG 138
H M+S+ + + + V F+ R+ N L L +EY++ELKFDG+A++LRYE+G
Sbjct: 77 RHAVPMLSIRTETDTTAQGVRNFDTRVRNALGLGDGDPAVEYLSELKFDGLAISLRYEHG 136
Query: 139 YLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDFIKLNKYR 198
L +A+TRGDG GE++T N+ I +IPL L+ P ++EVR E+ + + DF LN +
Sbjct: 137 VLVRAATRGDGETGEDVTHNVRTIQQIPLRLH-GAAPAVIEVRGEIYMRRDDFEALNNRQ 195
Query: 199 YHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMPSSHSELLNWYQK 258
G K F NPRNAAAG +RQL+P+I + L FFA+G+GE G ++P++ +ELL
Sbjct: 196 REAGDKVFVNPRNAAAGAVRQLDPRIAARRPLSFFAYGLGEHAGFDLPATQAELLTRLAA 255
Query: 259 IGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKLGFTSRAPR 318
G+ +C V SG LI F+ +I R LPY+IDGVVYK+N + Q++LGF +R PR
Sbjct: 256 FGVPVCEHREVSSGPEGLIAFHDRIAALRNELPYDIDGVVYKVNRVDLQRELGFVTREPR 315
Query: 319 FALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHNESEIYRKN 378
+A+A+K+ ++E +T++ I++Q+GRTG +TPVA L+PV + G+T+T ATLHN+ EI RK+
Sbjct: 316 WAVAHKYPAQEEITRLAGIDVQVGRTGALTPVARLEPVFVGGVTVTNATLHNQDEIDRKD 375
Query: 379 IQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKI----PNICPICNSKIIYIESNLIA 434
+++GD V+V R+G+VIP++ +L R + F + P CP+C S ++ E +A
Sbjct: 376 VRVGDWVIVRRAGDVIPEVVGPVLERRVGEPPRFNLLASYPT-CPVCGSHVVRGEDEAVA 434
Query: 435 RCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKINFKNLL 494
RCSG C AQRK L HF+ R+AM+I GLG K++E+LV+A+IV T DLYK+ L
Sbjct: 435 RCSGGLF-CPAQRKQALLHFAGRRAMDIEGLGDKLVEQLVDASIVKTPADLYKLGILALA 493
Query: 495 RLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLECMFKATE 554
L+R+ K A N+L AI+KS+ TT +RFI+ALGIR+VGE TAK+LA +F +L+ + A E
Sbjct: 494 NLERMGEKSAQNLLAAIEKSRNTTLARFIFALGIRNVGEATAKDLARHFGSLDALLAADE 553
Query: 555 EQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGNKNYLKEKIFVF 614
L +P +G K +F + + ++ QLR G+ W + FV
Sbjct: 554 GALQQVPDVGPVVAKCIAEFFAEAHNVEVVEQLRAAGLRWEEGAPAAPASGSVAGLTFVI 613
Query: 615 TGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKILDEKNF 674
TG+L R+EA LIE GGKV +SK T+YLV G + G KL KA L + I+DE
Sbjct: 614 TGTLPTLSRDEAKALIEAHGGKVSGSVSKKTDYLVAGAEAGSKLAKAQDLGVDIVDEDGL 673
Query: 675 VKIVK 679
++++
Sbjct: 674 RRLLE 678
>sp|A9II69|DNLJ_BORPD DNA ligase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 /
CCUG 43448) GN=ligA PE=3 SV=1
Length = 697
Score = 583 bits (1504), Expect = e-165, Method: Compositional matrix adjust.
Identities = 285/690 (41%), Positives = 427/690 (61%), Gaps = 31/690 (4%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
+ + RV L+ E+ +HN+ YY++D+P +SD +YD L+ EL ++E +PEL+T +S TQ
Sbjct: 6 GQAAQRVAALRNEIEQHNVRYYVHDDPSVSDAEYDALMRELIQLETDHPELVTPESPTQR 65
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELK------LTKNIEYIAELK 125
VG V H M+SL N F ++V F++R+ + L+ + + EY ELK
Sbjct: 66 VGAAPLAAFGSVRHAVPMLSLGNAFDPDEVQAFDRRVGDTLRGAGLLRVDQQPEYFCELK 125
Query: 126 FDGIAVNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVL 185
DG+A++LRYE G L QA+TRGDG GE++T N+ I +PL L P +LEVR EVL
Sbjct: 126 LDGLAISLRYEDGVLVQAATRGDGQTGEDVTANVRTIRAVPLRLK-GAAPRVLEVRGEVL 184
Query: 186 IYKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM-- 243
+ + +F +LN+ + K F NPRNAAAG LRQL+P+I + L FFA+ GE+ G+
Sbjct: 185 MNRAEFDRLNRSQAARDEKVFVNPRNAAAGSLRQLDPRITAQRPLRFFAYSWGEVHGLPG 244
Query: 244 -----------------NMP-SSHSELLNWYQKIGLSICGEYSVLS-GVNKLIEFYKKIN 284
+P +H +L+W ++GL + ++ + G L+ FY+++
Sbjct: 245 RQTALFDEPAPGAREESTLPRDTHGAMLDWLAELGLPVNTRHNRRAVGAEGLLAFYEQVG 304
Query: 285 IKRFNLPYEIDGVVYKINCLSTQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRT 344
+R LPY+IDGVVYK+N L QK LGF +RAPRFALA+KF ++EA T++ I +Q+GRT
Sbjct: 305 RERPGLPYDIDGVVYKVNSLPAQKVLGFVARAPRFALAHKFPAEEATTRLLDIEVQVGRT 364
Query: 345 GIITPVALLKPVLIDGITITRATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSL 404
G ITPVA L+PV + G+T+T ATLHNE E+ RK+++IGDTV V R+G+VIP++ +
Sbjct: 365 GAITPVARLQPVFVGGVTVTNATLHNEDEVRRKDVRIGDTVTVRRAGDVIPEVVGPVPGK 424
Query: 405 RPNDSKIFKIPNICPICNSKIIYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIG 464
RP D++ F +P CP+C S I E IARC+G C AQRK L H + RKA++I G
Sbjct: 425 RPADAREFVMPVSCPVCGSAIERPEDEAIARCTGGLF-CAAQRKQTLLHAAGRKALDIDG 483
Query: 465 LGKKMIEKLVNANIVVTAVDLYKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIY 524
LG+K+I++LV++ V + DLY +N L L+R+ K A+N++ AI +++ + R ++
Sbjct: 484 LGEKLIDQLVDSGRVKSLADLYSLNAFELAALERMGKKSADNLVAAIDRARTPSLGRLLF 543
Query: 525 ALGIRHVGETTAKELANYFKNLECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLI 584
ALGIRHVGETTA+++A +F ++E + A EE L P +G + +F +P +R +I
Sbjct: 544 ALGIRHVGETTARDVARHFGSIETIMDADEEALAGAPDVGPVVAGSIRRFFAEPHNREII 603
Query: 585 SQLRDVGIYWLNNPNTKGNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKN 644
L+ G++ + +GN L K FV TG++ + R+EA I GGKV +SK
Sbjct: 604 DLLKAQGVHPVPEAGPQGNT--LAGKTFVLTGTMPNWTRDEATRHILAAGGKVSGSVSKK 661
Query: 645 TNYLVKGQKPGKKLEKAIKLNIKILDEKNF 674
T Y+V G++ G KL KA +L + +LDE
Sbjct: 662 TAYVVAGEEAGSKLAKAQELGVTVLDEDGL 691
>sp|B6J1C6|DNLJ_COXB2 DNA ligase OS=Coxiella burnetii (strain CbuG_Q212) GN=ligA PE=3
SV=1
Length = 677
Score = 583 bits (1503), Expect = e-165, Method: Compositional matrix adjust.
Identities = 286/669 (42%), Positives = 434/669 (64%), Gaps = 5/669 (0%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
+K+ R+ L++E++ HN YY+ P I D+ YD+L EL+K+E+KYPE +T S TQ
Sbjct: 8 AKIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQR 67
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIAV 131
VG + + VHH M+SLDN F ++ + F+KRI LKL K EY+ E K DG+A+
Sbjct: 68 VGAEPLKVFEPVHHEIPMLSLDNVFDEKGLRAFDKRIRQRLKLDKPFEYVCEPKMDGVAL 127
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+L YE G L +A+TRGDG GEN+T N I +PL L PEL+E+R EVL+ ++ F
Sbjct: 128 SLLYENGELIRAATRGDGYTGENVTQNTRTIASVPLQLRGNDYPELVEIRGEVLMPREGF 187
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMPSSHSE 251
K N+ G K F NPRNAA+G LRQL+P+I + L F+ + +G L+G + P +H +
Sbjct: 188 AKFNREAEKRGDKTFANPRNAASGSLRQLDPRITAKRPLIFYGYLIGLLKGKDFPKNHCD 247
Query: 252 LLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKLG 311
+L W++ G+ + E V+ G+ +++Y+ + R +P++IDG+V K+N L Q +LG
Sbjct: 248 VLKWFKDWGIPVISEIKVVGGIEGCLDYYEHLVKTREKMPFDIDGIVIKVNSLQVQAELG 307
Query: 312 FTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHNE 371
F SRAPR+A+AYKF ++E +T +KAI Q+GRTG +TPVA L+PV + G+T++ ATLHN
Sbjct: 308 FVSRAPRWAIAYKFPAQEKMTVVKAIEFQVGRTGAVTPVARLEPVSVSGVTVSNATLHNF 367
Query: 372 SEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYIESN 431
E+YRK++++GDTV+V R+G+VIP++ IL+ RP +K+ KIP+ CP+C++++I E
Sbjct: 368 DELYRKDVRVGDTVIVRRAGDVIPEVVGPILAKRPKKAKLIKIPSRCPVCHAEVIKPEGE 427
Query: 432 LIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKINFK 491
+ARC G + C AQ + ++HF+SR+A++I GLG K++E + ++ +Y++
Sbjct: 428 AVARCVGG-LYCRAQLRESIKHFASRRALDIEGLGDKLVELFIQEKLIKDITGIYQLKKS 486
Query: 492 NLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLECMFK 551
+ L R+ K A N+L AI+KSK TT RF+YALGIR VG+TTA+ LA +F L+ + K
Sbjct: 487 AITALPRMGEKSAENLLTAIEKSKKTTLPRFLYALGIRGVGDTTARTLARHFHELDLLMK 546
Query: 552 ATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKG-NKNYLKEK 610
A+ E L I IG + F +Q + LI++L +G++W P K K+ + K
Sbjct: 547 ASIETLQEIRDIGPVAAENIHAFFHQKHNAELINKLIHLGVHW---PQEKAVVKSEIAGK 603
Query: 611 IFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKILD 670
FV TG+L + R EA IE GGK + +SKNT+Y++ G+ PG K EKA L I ++D
Sbjct: 604 TFVLTGALKSLTREEAEEKIERSGGKATSSVSKNTDYVIVGENPGSKYEKAKALGISLID 663
Query: 671 EKNFVKIVK 679
E+ F+K++K
Sbjct: 664 EEAFLKLLK 672
>sp|Q5NYU3|DNLJ_AROAE DNA ligase OS=Aromatoleum aromaticum (strain EbN1) GN=ligA PE=3
SV=1
Length = 681
Score = 583 bits (1502), Expect = e-165, Method: Compositional matrix adjust.
Identities = 284/671 (42%), Positives = 418/671 (62%), Gaps = 10/671 (1%)
Query: 17 RVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVG 76
R +L++EL H+ AYY+ D P + D +YD+L EL +E ++PELL DS T+ VG
Sbjct: 10 RAAQLRRELEAHDHAYYVLDAPTVPDAEYDRLFRELDALERRHPELLVPDSPTRRVGGAP 69
Query: 77 GENSKYVHHTFKMMSL--DNGFSDEDVIIFNKRITNELKLTKN---IEYIAELKFDGIAV 131
V H M+S+ + + VI F+ R+ N L+L + +EY+ ELKFDG+A+
Sbjct: 70 VPGLVPVRHAVPMLSIRTETDTTSGGVIAFDTRVRNALELGPHAPPVEYLGELKFDGLAI 129
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+LRYE G L +A+TRGDG GE++T ++ I +IPL L + PP L+EVR E+ + + F
Sbjct: 130 SLRYENGMLVRAATRGDGYTGEDVTHSVRTIRQIPLRLPGR-PPALIEVRGEIYMRRDAF 188
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHG---VGELRGMNMPSS 248
+LN + G K F NPRNAAAG +RQL+ +I + L FFA+G +GE G NMP++
Sbjct: 189 ERLNARQSETGGKVFVNPRNAAAGAVRQLDARIAARRPLSFFAYGFGEIGESGGWNMPAT 248
Query: 249 HSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQK 308
E+L+ +G+ +C V SG + LI F+ +I R +LPY+IDGVVYK+N Q+
Sbjct: 249 QGEMLDALDALGIPVCEHRVVASGPDGLIAFHDRIAAARDSLPYDIDGVVYKVNRFDLQR 308
Query: 309 KLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATL 368
+LGF +R PR+A+A+K+ ++E +T++ I IQ+GRTG +TPVA LKPV + G+T+T ATL
Sbjct: 309 RLGFVTREPRWAVAHKYPAQEEITELVDIEIQVGRTGALTPVARLKPVFVGGVTVTNATL 368
Query: 369 HNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYI 428
HNE EI RK + IGD V+V R+G+VIP+I + ++ R + F +P CP+C S
Sbjct: 369 HNEEEIQRKGLLIGDQVIVRRAGDVIPQIVAPVVERRNGSERPFVMPQTCPVCGSHAEKQ 428
Query: 429 ESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKI 488
+ RCSG C AQRK L HF+ R+AM+I GLG K++++LV+ IV T DLY++
Sbjct: 429 PDEAVTRCSGGLF-CPAQRKQALLHFAGRRAMDIEGLGDKLVDQLVDGGIVSTPADLYRL 487
Query: 489 NFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLEC 548
L L R+++K A N+L AI+KS+ T +RFI+ALGIR+VGE TA+ELA +F +L+
Sbjct: 488 GLVKLANLPRMADKSAANLLAAIEKSRHATLARFIFALGIRNVGEATARELARHFGSLDA 547
Query: 549 MFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGNKNYLK 608
+ A E+L + +G + F + +R +I QLR G++W
Sbjct: 548 LMDADIERLQQVADVGPIVAHSIAGFFAEMHNREVIEQLRAAGVHWDEGVPAVAADGPAS 607
Query: 609 EKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKI 668
K FV TG+L R++A LIE+ GGKV +SK T+Y+V G + G KL KA +L + I
Sbjct: 608 GKTFVLTGALPTMSRDDAKALIESHGGKVSGSVSKKTDYVVAGAEAGSKLAKAQELGVAI 667
Query: 669 LDEKNFVKIVK 679
LDE ++++
Sbjct: 668 LDEDGLRRLLE 678
>sp|B6J878|DNLJ_COXB1 DNA ligase OS=Coxiella burnetii (strain CbuK_Q154) GN=ligA PE=3
SV=1
Length = 673
Score = 582 bits (1500), Expect = e-165, Method: Compositional matrix adjust.
Identities = 286/669 (42%), Positives = 434/669 (64%), Gaps = 5/669 (0%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
+K+ R+ L++E++ HN YY+ P I D+ YD+L EL+K+E+KYPE +T S TQ
Sbjct: 8 AKIQKRIERLREEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQR 67
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIAV 131
VG + + VHH M+SLDN F ++ + F+KRI LKL K EY+ E K DG+A+
Sbjct: 68 VGAEPLKVFEPVHHEIPMLSLDNVFDEKGLRAFDKRIRQRLKLDKPFEYVCEPKMDGVAL 127
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+L YE G L +A+TRGDG GEN+T N I +PL L PEL+E+R EVL+ ++ F
Sbjct: 128 SLLYENGELIRAATRGDGYTGENVTQNTRTIASVPLQLRGNDYPELVEIRGEVLMPREGF 187
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMPSSHSE 251
K N+ G K F NPRNAA+G LRQL+P+I + L F+ + +G L+G + P +H +
Sbjct: 188 AKFNREAEKRGDKTFANPRNAASGSLRQLDPRITAKRPLIFYGYLIGLLKGKDFPKNHCD 247
Query: 252 LLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKLG 311
+L W++ G+ + E V+ G+ +++Y+ + R +P++IDG+V K+N L Q +LG
Sbjct: 248 VLKWFKDWGIPVISEIKVVGGIEGCLDYYEHLVKTREKMPFDIDGIVIKVNSLQVQAELG 307
Query: 312 FTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHNE 371
F SRAPR+A+AYKF ++E +T +KAI Q+GRTG +TPVA L+PV + G+T++ ATLHN
Sbjct: 308 FVSRAPRWAIAYKFPAQEKMTVVKAIEFQVGRTGAVTPVARLEPVSVSGVTVSNATLHNF 367
Query: 372 SEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYIESN 431
E+YRK++++GDTV+V R+G+VIP++ IL+ RP +K+ KIP+ CP+C++++I E
Sbjct: 368 DELYRKDVRVGDTVIVRRAGDVIPEVVGPILAKRPKKAKLIKIPSRCPVCHAEVIKPEGE 427
Query: 432 LIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKINFK 491
+ARC G + C AQ + ++HF+SR+A++I GLG K++E + ++ +Y++
Sbjct: 428 AVARCMGG-LYCRAQLRESIKHFASRRALDIEGLGDKLVELFIQEKLIKDITGIYQLKKS 486
Query: 492 NLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLECMFK 551
+ L R+ K A N+L AI+KSK TT RF+YALGIR VG+TTA+ LA +F L+ + K
Sbjct: 487 AITALPRMGEKSAENLLTAIEKSKKTTLPRFLYALGIRGVGDTTARTLARHFHELDLLMK 546
Query: 552 ATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKG-NKNYLKEK 610
A+ E L I IG + F +Q + LI++L +G++W P K K+ + K
Sbjct: 547 ASIETLQEIRDIGPVVAENIHAFFHQKHNAELINKLIHLGVHW---PQEKAVVKSEIAGK 603
Query: 611 IFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKILD 670
FV TG+L + R EA IE GGK + +SKNT+Y++ G+ PG K EKA L I ++D
Sbjct: 604 TFVLTGALKSLTREEAEEKIERSGGKATSSVSKNTDYVIVGENPGSKYEKAKALGISLID 663
Query: 671 EKNFVKIVK 679
E+ F+K++K
Sbjct: 664 EEAFLKLLK 672
>sp|Q83DZ6|DNLJ_COXBU DNA ligase OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase
I) GN=ligA PE=3 SV=2
Length = 673
Score = 582 bits (1499), Expect = e-165, Method: Compositional matrix adjust.
Identities = 286/669 (42%), Positives = 434/669 (64%), Gaps = 5/669 (0%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
+K+ R+ L++E++ HN YY+ P I D+ YD+L EL+K+E+KYPE +T S TQ
Sbjct: 8 AKIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELEKLEKKYPETITPSSPTQR 67
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIAV 131
VG + + VHH M+SLDN F ++ + F+KRI LKL K EY+ E K DG+A+
Sbjct: 68 VGAEPLKVFEPVHHEIPMLSLDNVFDEKGLRAFDKRIRQRLKLDKPFEYVCEPKMDGVAL 127
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+L YE G L +A+TRGDG GEN+T N I +PL L PEL+E+R EVL+ ++ F
Sbjct: 128 SLLYENGELIRAATRGDGYTGENVTQNTRTIASVPLQLRGNDYPELVEIRGEVLMPREGF 187
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMPSSHSE 251
K N+ G K F NPRNAA+G LRQL+P+I + L F+ + +G L+G + P +H +
Sbjct: 188 AKFNREAEKRGDKTFANPRNAASGSLRQLDPRITAKRPLIFYGYLIGLLKGKDFPKNHCD 247
Query: 252 LLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKLG 311
+L W++ G+ + E V+ G+ +++Y+ + R +P++IDG+V K+N L Q +LG
Sbjct: 248 VLKWFKDWGIPVISEIKVVGGIEGCLDYYEHLVKTREKMPFDIDGIVIKVNSLQVQAELG 307
Query: 312 FTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHNE 371
F SRAPR+A+AYKF ++E +T +KAI Q+GRTG +TPVA L+PV + G+T++ ATLHN
Sbjct: 308 FVSRAPRWAIAYKFPAQEKMTVVKAIEFQVGRTGAVTPVARLEPVSVSGVTVSNATLHNF 367
Query: 372 SEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYIESN 431
E+YRK++++GDTV+V R+G+VIP++ IL+ RP +K+ KIP+ CP+C++++I E
Sbjct: 368 DELYRKDVRVGDTVIVRRAGDVIPEVVGPILAKRPKKAKLIKIPSRCPVCHAEVIKPEGE 427
Query: 432 LIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKINFK 491
+ARC G + C AQ + ++HF+SR+A++I GLG K++E + ++ +Y++
Sbjct: 428 AVARCVGG-LYCRAQLRESIKHFASRRALDIEGLGDKLVELFIQEKLIKDITGIYQLKKS 486
Query: 492 NLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLECMFK 551
+ L R+ K A N+L AI+KSK TT RF+YALGIR VG+TTA+ LA +F L+ + K
Sbjct: 487 AITALPRMGEKSAENLLTAIEKSKKTTLPRFLYALGIRGVGDTTARTLARHFHELDLLMK 546
Query: 552 ATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKG-NKNYLKEK 610
A+ E L I IG + F +Q + LI++L +G++W P K K+ + K
Sbjct: 547 ASIETLQEIRDIGPVAAENIHAFFHQKNNAELINKLIHLGVHW---PQEKAVVKSEIAGK 603
Query: 611 IFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKILD 670
FV TG+L + R EA IE GGK + +SKNT+Y++ G+ PG K EKA L I ++D
Sbjct: 604 TFVLTGALKSLTREEAEEKIERSGGKATSSVSKNTDYVIVGENPGSKYEKAKALGISLID 663
Query: 671 EKNFVKIVK 679
E+ F+K++K
Sbjct: 664 EEAFLKLLK 672
>sp|A9NC33|DNLJ_COXBR DNA ligase OS=Coxiella burnetii (strain RSA 331 / Henzerling II)
GN=ligA PE=3 SV=1
Length = 670
Score = 582 bits (1499), Expect = e-165, Method: Compositional matrix adjust.
Identities = 287/669 (42%), Positives = 433/669 (64%), Gaps = 5/669 (0%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
+K+ R+ L+ E++ HN YY+ P I D+ YD+L EL+K+E+KYPE +T S TQ
Sbjct: 5 AKIQKRIERLRHEINDHNYRYYVLSQPTIPDSVYDELFHELEKLEKKYPETITPSSPTQR 64
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIAV 131
VG + + VHH M+SLDN F ++ + F+KRI LKL K EY+ E K DG+A+
Sbjct: 65 VGAEPLKVFEPVHHEIPMLSLDNVFDEKGLRAFDKRIRQRLKLDKPFEYVCEPKMDGVAL 124
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+L YE G L +A+TRGDG GEN+T N I +PL L PEL+E+R EVL+ ++ F
Sbjct: 125 SLLYENGELIRAATRGDGYTGENVTQNTRTIASVPLQLRGNDYPELVEIRGEVLMPREGF 184
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMPSSHSE 251
K N+ G K F NPRNAA+G LRQL+P+I + L F+ + +G L+G + P +H +
Sbjct: 185 AKFNREAEKRGDKTFANPRNAASGSLRQLDPRITAKRPLIFYGYLIGLLKGKDFPKNHCD 244
Query: 252 LLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKLG 311
+L W++ G+ + E V+ G+ +++Y+ + R +P++IDG+V K+N L Q +LG
Sbjct: 245 VLKWFKDWGIPVISEIKVVGGIEGCLDYYEHLVKTREKMPFDIDGIVIKVNSLQVQAELG 304
Query: 312 FTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHNE 371
F SRAPR+A+AYKF ++E +T +KAI Q+GRTG +TPVA L+PV + G+T++ ATLHN
Sbjct: 305 FVSRAPRWAIAYKFPAQEKMTVVKAIEFQVGRTGAVTPVARLEPVSVSGVTVSNATLHNF 364
Query: 372 SEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYIESN 431
E+YRK++++GDTV+V R+G+VIP++ IL+ RP +K+ KIP+ CP+C++++I E
Sbjct: 365 DELYRKDVRVGDTVIVRRAGDVIPEVVGPILAKRPKKAKLIKIPSRCPVCHAEVIKPEGE 424
Query: 432 LIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKINFK 491
+ARC G + C AQ + ++HFSSR+A++I GLG K++E + ++ +Y++
Sbjct: 425 AVARCVGG-LYCRAQLRESIKHFSSRRALDIEGLGDKLVELFIQEKLIKDITGIYQLKKS 483
Query: 492 NLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLECMFK 551
+ L R+ K A N+L AI+KSK TT RF+YALGIR VG+TTA+ LA +F L+ + K
Sbjct: 484 AITALPRMGEKSAENLLTAIEKSKKTTLPRFLYALGIRGVGDTTARTLARHFHELDLLMK 543
Query: 552 ATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKG-NKNYLKEK 610
A+ E L I IG + F +Q + LI++L +G++W P K K+ + K
Sbjct: 544 ASIETLQEIRDIGPVAAENIHAFFHQKNNAELINKLIHLGVHW---PQEKAVVKSEIAGK 600
Query: 611 IFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKILD 670
FV TG+L + R EA IE GGK + +SKNT+Y++ G+ PG K EKA L I ++D
Sbjct: 601 TFVLTGALKSLTREEAEEKIERSGGKATSSVSKNTDYVIVGENPGSKYEKAKALGISLID 660
Query: 671 EKNFVKIVK 679
E+ F+K++K
Sbjct: 661 EEAFLKLLK 669
>sp|Q3SL40|DNLJ_THIDA DNA ligase OS=Thiobacillus denitrificans (strain ATCC 25259)
GN=ligA PE=3 SV=1
Length = 686
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 277/662 (41%), Positives = 418/662 (63%), Gaps = 11/662 (1%)
Query: 17 RVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQHVGLVG 76
R L++E+ RHN AYY+ D P I D +YD+L EL+ +E +PEL+ DS T+ VG
Sbjct: 9 RAAALRREIERHNYAYYVLDAPTIPDAEYDRLYHELEALEAAHPELVAADSPTRRVGGQP 68
Query: 77 GENSKYVHHTFKMMSL--DNGFSDEDVIIFNKRITNELKLTKN---IEYIAELKFDGIAV 131
K V H M+S+ + + F+ R+ EL L +EY AELKFDG+A+
Sbjct: 69 LAGFKPVRHAVPMLSIRTETDTTAAGARAFDVRVRKELGLAPADPPVEYAAELKFDGLAI 128
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
NLRYE G L A+TRGDG GE++T N+ + IPL L+ PP +LEVR EV + + DF
Sbjct: 129 NLRYEAGVLVAAATRGDGETGEDVTQNVRTVRTIPLRLHGDAPPAVLEVRGEVFMRRDDF 188
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGM-NMPSSHS 250
+ N + G NPRN AAG +RQL+P I + L F+A+G+GE+ G + P++H
Sbjct: 189 ERYNAQQRAAGKPTLVNPRNGAAGSIRQLDPAIAGQRPLSFYAYGLGEVVGWPDAPATHG 248
Query: 251 ELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKL 310
L+ Q +G+ + E V +GV+ LI F+ I +R LP++IDGVVYK+N + Q++L
Sbjct: 249 ATLDALQGLGVPVSAERCVCNGVDDLIAFHDDIAARRDQLPFDIDGVVYKVNAFALQREL 308
Query: 311 GFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHN 370
GF +R PR+A+A+K+ ++E LT + I + +GRTG +TPVA L PV + G+T+T ATLHN
Sbjct: 309 GFLTREPRWAVAHKYPAQEQLTTVLGIGVHVGRTGALTPVARLAPVFVGGVTVTNATLHN 368
Query: 371 ESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSK----IFKIPNICPICNSKII 426
+ EI RK+ ++GDTV+V R+G+VIP+I +++L RP I + +CP C S ++
Sbjct: 369 QDEIDRKDTRVGDTVIVRRAGDVIPEIVATVLERRPQPEPPRFNILQSYPVCPECGSHVV 428
Query: 427 YIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLY 486
+E +ARC+G + C AQRK L HF+SR+AM+I G+G+K++++LV+ +V T DLY
Sbjct: 429 RLEGEAVARCTGG-LYCPAQRKQALLHFASRRAMDIDGVGEKLVDQLVSRELVRTPADLY 487
Query: 487 KINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNL 546
++ + L L+R++ K A N++ AI+ SK TT +RFIYALGIR+VGETTA++LA +F L
Sbjct: 488 RLPLETLAGLERMAEKSARNLIQAIETSKSTTLARFIYALGIRNVGETTARDLARHFGAL 547
Query: 547 ECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKGNKNY 606
+ + A E LL + +G ++ +F +P + ++ +LR +G++W + +
Sbjct: 548 DALLGANETALLGVRDVGPIVAQSIAQFFAEPHNLEVVGKLRALGVHWPETTGMQQSGGI 607
Query: 607 LKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNI 666
L K V TG+L A R++A IE+ GGKV +SK T+Y+V G++ G KL KA +L +
Sbjct: 608 LSGKTLVLTGTLPALTRDQAKERIESAGGKVAGSVSKKTDYVVAGEEAGSKLAKARELGV 667
Query: 667 KI 668
I
Sbjct: 668 TI 669
>sp|A9KCS0|DNLJ_COXBN DNA ligase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ligA
PE=3 SV=1
Length = 670
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 285/669 (42%), Positives = 434/669 (64%), Gaps = 5/669 (0%)
Query: 12 SKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQH 71
+K+ R+ L++E++ HN YY+ P I D+ YD+L EL+K+E+KYPE +T S TQ
Sbjct: 5 AKIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQR 64
Query: 72 VGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIAV 131
VG + + VHH M+SLDN F ++ + F+KRI LKL K EY+ E K DG+A+
Sbjct: 65 VGAEPLKVFEPVHHEIPMLSLDNVFDEKGLRAFDKRIRQRLKLDKPFEYVCEPKMDGVAL 124
Query: 132 NLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNIKYPPELLEVRCEVLIYKKDF 191
+L YE G L +A+TRGDG GEN+T N I +PL L PEL+E+R EVL+ ++ F
Sbjct: 125 SLLYENGELIRAATRGDGYTGENVTQNTRTIASVPLQLRGNDYPELVEIRGEVLMPREGF 184
Query: 192 IKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMPSSHSE 251
K N+ G K F NPRNAA+G LRQL+P+I + L F+ + +G L+G + P +H +
Sbjct: 185 AKFNREAEKRGDKTFANPRNAASGSLRQLDPRITAKRPLIFYGYLIGLLKGKDFPKNHCD 244
Query: 252 LLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLSTQKKLG 311
+L W++ G+ + E V+ G+ +++Y+ + R +P++IDG+V K+N L Q +LG
Sbjct: 245 VLKWFKDWGIPVISEIKVVGGIEGCLDYYEHLVKTREKMPFDIDGIVIKVNSLQVQAELG 304
Query: 312 FTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITRATLHNE 371
F SRAPR+A+AYKF ++E +T +KAI Q+GRTG++TPVA L+PV + G+T++ ATLHN
Sbjct: 305 FVSRAPRWAIAYKFPAQEKMTVVKAIEFQVGRTGVVTPVARLEPVSVSGVTVSNATLHNF 364
Query: 372 SEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKIIYIESN 431
E+YRK++++GDTV+V R+G+VIP++ IL+ RP +K+ KIP+ CP+C++++I E
Sbjct: 365 DELYRKDVRVGDTVIVRRAGDVIPEVVGPILAKRPKKAKLIKIPSRCPVCHAEVIKPEGE 424
Query: 432 LIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDLYKINFK 491
+ARC G + C AQ + ++HF+SR+A++I GLG K++E + ++ +Y++
Sbjct: 425 AVARCVGG-LYCRAQLRESIKHFASRRALDIEGLGDKLVELFIQEKLIKDITGIYQLKKS 483
Query: 492 NLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKNLECMFK 551
+ L R+ K A N+L AI+KSK TT RF+YALGIR VG+T A+ LA +F L+ + K
Sbjct: 484 AITALPRMGEKSAENLLTAIEKSKKTTLPRFLYALGIRGVGDTIARTLARHFHELDLLMK 543
Query: 552 ATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLNNPNTKG-NKNYLKEK 610
A+ E L I IG + F +Q + LI++L +G++W P K K+ + K
Sbjct: 544 ASIETLQEIRDIGPVVAENIHAFFHQKHNAELINKLIHLGVHW---PQEKAVVKSEIAGK 600
Query: 611 IFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKGQKPGKKLEKAIKLNIKILD 670
FV TG+L + R EA IE GGK + +SKNT+Y++ G+ PG K EKA L I ++D
Sbjct: 601 TFVLTGALKSLTREEAEEKIERSGGKATSSVSKNTDYVIVGENPGSKYEKAKALGISLID 660
Query: 671 EKNFVKIVK 679
E+ F+K++K
Sbjct: 661 EEAFLKLLK 669
>sp|Q2YBB7|DNLJ_NITMU DNA ligase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB
11849) GN=ligA PE=3 SV=1
Length = 707
Score = 578 bits (1491), Expect = e-164, Method: Compositional matrix adjust.
Identities = 295/688 (42%), Positives = 424/688 (61%), Gaps = 21/688 (3%)
Query: 11 FSKLSFRVTELKKELHRHNIAYYLYDNPIISDNKYDQLLFELKKIEEKYPELLTKDSLTQ 70
S++S + EL+ + HNI YY D P I D +D+L EL+++E+++PEL+T DS TQ
Sbjct: 5 LSEISRHMRELRDAIELHNIRYYELDTPTIPDADFDKLFRELEELEQRHPELITPDSPTQ 64
Query: 71 HVGLVGGENSKYVHHTFKMMSLDNGFSDEDVIIFNKRITNELKLTKNIEYIAELKFDGIA 130
VG+ + V H M+SL N F++ +V F++R+ L + + +EY E KFDG+A
Sbjct: 65 RVGIPPLKAFPQVVHRTPMLSLSNAFTEGEVEAFDRRVRQSLGIAQ-VEYAVEPKFDGLA 123
Query: 131 VNLRYEYGYLKQASTRGDGNIGENITTNIHIIHKIPLVLNI----KYPPELLEVRCEVLI 186
++L YE G L +TRGDG IGE++T N+ I IPL L P LEVR EVL+
Sbjct: 124 ISLCYENGMLVSGATRGDGYIGEDVTLNLKTIRSIPLGLRAGDGSAEVPAFLEVRGEVLM 183
Query: 187 YKKDFIKLNKYRYHLGLKKFTNPRNAAAGILRQLNPKINKNKILHFFAHGVGELRGMNMP 246
K DF +LN+ + K F NPRNAAAG LRQL+P I N+ L FFA+G+G G N+P
Sbjct: 184 LKADFERLNRQQREKNEKTFINPRNAAAGSLRQLDPCITANRNLRFFAYGIGVCEGGNVP 243
Query: 247 -SSHSELLNWYQKIGLSICGEYSVLSGVNKLIEFYKKINIKRFNLPYEIDGVVYKINCLS 305
+HS LL++ + + E ++GV L+E++ +IN R L Y+IDG VYK+N L
Sbjct: 244 HDTHSHLLDYLSSLRFPVMRERRTVTGVAGLLEYHHEINGLREQLSYDIDGTVYKVNELE 303
Query: 306 TQKKLGFTSRAPRFALAYKFLSKEALTKIKAINIQIGRTGIITPVALLKPVLIDGITITR 365
Q+KLGF SRAPRFALA+KF ++EA T++ I++Q+GRTG +TPVA LKPV + G T+T
Sbjct: 304 YQEKLGFVSRAPRFALAHKFPAQEATTELLGIDVQVGRTGALTPVARLKPVFVGGATVTN 363
Query: 366 ATLHNESEIYRKNIQIGDTVVVHRSGNVIPKITSSILSLRPNDSKIFKIPNICPICNSKI 425
ATLHNE EI RK++ IGD V V R+G+VIP++ + RP+++K F +P CP+C S+
Sbjct: 364 ATLHNEDEIRRKDVMIGDRVTVRRAGDVIPEVVAVQKESRPSNAKPFVMPEHCPVCGSRT 423
Query: 426 IYIESNLIARCSGSWIECIAQRKAGLQHFSSRKAMNIIGLGKKMIEKLVNANIVVTAVDL 485
I + + RC+G C AQRK + HF+SR+AMNI GLG K+++ LV+ I+ T DL
Sbjct: 424 IRLPGETLTRCTGGLF-CPAQRKQAILHFASRRAMNIHGLGDKLVDHLVDNAIIRTPADL 482
Query: 486 YKINFKNLLRLDRVSNKLANNILLAIQKSKLTTFSRFIYALGIRHVGETTAKELANYFKN 545
YK+ L LDR+ K A NI+ I+KSK TT +RFIY+LGIR+VGE TA++LA YF
Sbjct: 483 YKLGLAALAALDRMGEKSAGNIINEIEKSKDTTLARFIYSLGIRNVGEATARDLARYFGG 542
Query: 546 LECMFKATEEQLLNIPKIGSTTVKAFIKFINQPLHRLLISQLRDVGIYWLN--------- 596
L+ + A E L + +G ++ F + +R ++ QLR GI W
Sbjct: 543 LDRLMDADVETLQQVSDVGPVVAQSIADFFGERHNREVVEQLRAAGIRWKEGAGTQTTDH 602
Query: 597 -----NPNTKGNKNYLKEKIFVFTGSLYAFKRNEAIILIENLGGKVVNFISKNTNYLVKG 651
+P + + + FV TG+L R EA IE +GGKV +SK T+Y+V G
Sbjct: 603 AAGSAHPGAAAASSKIAGRSFVLTGTLPTMSREEAREKIEAMGGKVAGSVSKKTDYVVAG 662
Query: 652 QKPGKKLEKAIKLNIKILDEKNFVKIVK 679
G K +KA++L + +LDE +++++
Sbjct: 663 ADAGSKYDKALELGVALLDEAELIRLLQ 690
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 246,786,807
Number of Sequences: 539616
Number of extensions: 10733598
Number of successful extensions: 33609
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 28522
Number of HSP's gapped (non-prelim): 1153
length of query: 687
length of database: 191,569,459
effective HSP length: 124
effective length of query: 563
effective length of database: 124,657,075
effective search space: 70181933225
effective search space used: 70181933225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)