BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11424
(245 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7VVU9|HEM3_BORPE Porphobilinogen deaminase OS=Bordetella pertussis (strain Tohama I
/ ATCC BAA-589 / NCTC 13251) GN=hemC PE=3 SV=1
Length = 314
Score = 251 bits (642), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 165/238 (69%), Gaps = 3/238 (1%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A++ G+ADLAVHSLKD+P++L + F L +L+R DPRDAF+SNDY SL+ LP A VGT+
Sbjct: 70 ALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGAAVGTS 129
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ I++ +P L++K LRGN+DTRL KLD G+YAAI+LAAAGL+RL L RIR L
Sbjct: 130 SLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARIRALLE 189
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
P+ LPA GQGA+ IEIL R ++ ML PL + V AERAVSR GSC++ LAA
Sbjct: 190 PDDSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQVPLAA 249
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
+A ++ E+ LRA++ P+G +I+ AE GP D + +G AA L GA I+
Sbjct: 250 YARIDG---DELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304
>sp|Q7W785|HEM3_BORPA Porphobilinogen deaminase OS=Bordetella parapertussis (strain 12822
/ ATCC BAA-587 / NCTC 13253) GN=hemC PE=3 SV=1
Length = 314
Score = 250 bits (638), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A++ G+ADLAVHSLKD+P++L + F L +L+R DPRDAF+SNDY SL+ LP A VGT+
Sbjct: 70 ALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGAAVGTS 129
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ I++ +P L++K LRGN+DTRL KLD G+YAAI+LAAAGL+RL L RIR L
Sbjct: 130 SLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARIRALLE 189
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
P LPA GQGA+ IEIL R ++ ML PL + V AERAVSR GSC++ LAA
Sbjct: 190 PADSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQVPLAA 249
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
+A ++ E+ LRA++ P+G +I+ AE GP D + +G AA L GA I+
Sbjct: 250 YARIDG---DELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304
>sp|Q7WKM1|HEM3_BORBR Porphobilinogen deaminase OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=hemC PE=3 SV=1
Length = 314
Score = 250 bits (638), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 124/238 (52%), Positives = 164/238 (68%), Gaps = 3/238 (1%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A++ G+ADLAVHSLKD+P++L + F L +L+R DPRDAF+SNDY SL+ LP A VGT+
Sbjct: 70 ALLDGRADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGAAVGTS 129
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ I++ +P L++K LRGN+DTRL KLD G+YAAI+LAAAGL+RL L RIR L
Sbjct: 130 SLRRESQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARIRALLE 189
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
P LPA GQGA+ IEIL R ++ ML PL + V AERAVSR GSC++ LAA
Sbjct: 190 PADSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQVPLAA 249
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
+A ++ E+ LRA++ P+G +I+ AE GP D + +G AA L GA I+
Sbjct: 250 YARIDG---DELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304
>sp|B2JEN9|HEM3_BURP8 Porphobilinogen deaminase OS=Burkholderia phymatum (strain DSM
17167 / STM815) GN=hemC PE=3 SV=1
Length = 327
Score = 244 bits (623), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 174/243 (71%), Gaps = 6/243 (2%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A+ G+ADLAVHSLKD+PM LP GF+L I++REDPRDAF+SN Y SL+ LP +VVGT+
Sbjct: 77 ALADGRADLAVHSLKDVPMELPEGFVLSTIMEREDPRDAFVSNQYDSLAALPAGSVVGTS 136
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ ++++ +P L++K LRGN+DTRL KLD+G+YAAIILAAAGLKRL L +RIR L
Sbjct: 137 SLRREAMLRARYPELVVKPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLGERIRSLLD 196
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
P LPA GQGA+ IEI R +L L PL+H + V+AER VSR GSC++ LAA
Sbjct: 197 PADSLPAAGQGALGIEIRAGRDDLAAWLAPLHHEHTAAAVEAERMVSRTLGGSCEVPLAA 256
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPET---VGLYAAELLKKKGAIEI 238
+A +++ ++LR I+ P+G ++++A+ + P T + +G A L+ +GA++I
Sbjct: 257 YA---TWHDGALHLRGIVATPDGERVLSAQASAPAATTDAALELGREVASQLEAQGALDI 313
Query: 239 IKS 241
+++
Sbjct: 314 VRA 316
>sp|Q82WS2|HEM3_NITEU Porphobilinogen deaminase OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=hemC PE=3 SV=1
Length = 308
Score = 243 bits (620), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 121/241 (50%), Positives = 166/241 (68%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+ G+AD+AVHS+KD+PM +PSGF L AI +REDPRDAF+SND+ SL LP +VVGT
Sbjct: 69 LALEDGRADIAVHSMKDVPMIVPSGFTLAAITEREDPRDAFVSNDFSSLEELPAGSVVGT 128
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ +++ FP L ++ LRGN+ TRL KLD+GEY+AIILAAAGLKRL L RI ML
Sbjct: 129 SSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLELGYRISMLL 188
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P LPA GQGA+ IE DN +++E + PL+H + V+AERA+SR GSC++ L
Sbjct: 189 PPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHAATACCVEAERAMSRMLGGSCQVPLG 248
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
FA + E + LR + P+G ++I ++ G ++ E VG A+ LK GA EI+
Sbjct: 249 GFAEI---FEDVLTLRGFVATPDGSRMIADKLCGKPESGEQVGQQLAQNLKAHGAEEILA 305
Query: 241 S 241
+
Sbjct: 306 A 306
>sp|Q7MQC7|HEM3_VIBVY Porphobilinogen deaminase OS=Vibrio vulnificus (strain YJ016)
GN=hemC PE=3 SV=1
Length = 312
Score = 243 bits (620), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 164/239 (68%), Gaps = 3/239 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+ADLAVHS+KD+P++ P G L I +REDPRDAF+SN Y + LP+ AVVGT
Sbjct: 69 VAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQGAVVGT 128
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
SLRR+ +K++ P L+IK LRGN+ TRL+KLD GEY AIILAAAGLKRL L++RIR
Sbjct: 129 CSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEERIRSFI 188
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P Q LPA GQGA+ IE N + ++++L PLNH + VK ERA++ G C++ +
Sbjct: 189 EPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGCQVPIG 248
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
++A++ EI LRA++ P+G +I+ E+ GP E +G+ A L +GA EI+
Sbjct: 249 SYALLEG---DEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLGVQLANQLLDEGAREIL 304
>sp|Q8DD85|HEM3_VIBVU Porphobilinogen deaminase OS=Vibrio vulnificus (strain CMCP6)
GN=hemC PE=3 SV=1
Length = 312
Score = 243 bits (620), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 164/239 (68%), Gaps = 3/239 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+ADLAVHS+KD+P++ P G L I +REDPRDAF+SN Y + LP+ AVVGT
Sbjct: 69 VAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQGAVVGT 128
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
SLRR+ +K++ P L+IK LRGN+ TRL+KLD GEY AIILAAAGLKRL L++RIR
Sbjct: 129 CSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEERIRSFI 188
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P Q LPA GQGA+ IE N + ++++L PLNH + VK ERA++ G C++ +
Sbjct: 189 EPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGCQVPIG 248
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
++A++ EI LRA++ P+G +I+ E+ GP E +G+ A L +GA EI+
Sbjct: 249 SYALLEG---DEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLGVQLANQLLDEGAREIL 304
>sp|B2T1D1|HEM3_BURPP Porphobilinogen deaminase OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=hemC PE=3 SV=1
Length = 342
Score = 242 bits (618), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 174/243 (71%), Gaps = 6/243 (2%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A+ G+ADLAVHSLKD+PM LP+GF L I++REDPRDA +SNDY SL+ LP AVVGT+
Sbjct: 76 ALADGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAGAVVGTS 135
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ +++ +P L ++ LRGN+DTRL+KLD+G+YAAIILAAAGLKRL L +RIR L
Sbjct: 136 SLRREAMLRMRYPHLEVRPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLGERIRALLD 195
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
P LPA GQGA+ IEI +R +L L PL+H + V+AER VSR GSC++ LAA
Sbjct: 196 PEDSLPAAGQGALGIEIRADRADLAAWLAPLHHDHTAAAVEAERMVSRALGGSCEVPLAA 255
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPE---TVGLYAAELLKKKGAIEI 238
+A + + ++LR I+ P+G ++++A+ + P + E +G A L+++GA++I
Sbjct: 256 YA---TWRDGALHLRGIVATPDGQRVLSAQASAPAPSVERAVALGQEVASALEQQGAMDI 312
Query: 239 IKS 241
+++
Sbjct: 313 VRA 315
>sp|Q479S8|HEM3_DECAR Porphobilinogen deaminase OS=Dechloromonas aromatica (strain RCB)
GN=hemC PE=3 SV=1
Length = 311
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 168/240 (70%), Gaps = 3/240 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+ +GKA LAVHS+KD+PM +P GF+L AI RE+PRDAF+SN Y L LP A+VGT
Sbjct: 69 VAMQEGKAHLAVHSMKDVPMVMPEGFVLAAISARENPRDAFVSNKYNGLDDLPAGAIVGT 128
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ ++++ +P L+IKSLRGN+DTRL KLD GEY AIILAAAGL RL ++ RI+ +
Sbjct: 129 SSLRRESILRAKYPQLVIKSLRGNLDTRLKKLDAGEYDAIILAAAGLIRLGMENRIKSVL 188
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
+ Q LPAPGQGA+ IE++D ++ +++ PLN + VKAERA SR GSC++ L
Sbjct: 189 TAEQSLPAPGQGALGIELIDGAADMADVVAPLNDPETAHCVKAERAFSRALGGSCQVPLG 248
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
+A+++N ++ LR + +G ++++AE+ G E +GL A L+ KGA I++
Sbjct: 249 GYAIIDN---GQLWLRGFVATADGQEVVSAELRGNPADDEALGLQLAAELRAKGADAILE 305
>sp|Q7P207|HEM3_CHRVO Porphobilinogen deaminase OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=hemC PE=3 SV=2
Length = 309
Score = 241 bits (616), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 162/240 (67%), Gaps = 3/240 (1%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A++ G+ADLAVHSLKD+PM LP GF L A+ +REDPRDAF+SN Y LS LP +VVGT+
Sbjct: 67 ALMDGRADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVGTS 126
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ +++ FP L +K LRGN+ TRL KLD GE+ AIILAAAGLKRL L +RI+ +
Sbjct: 127 SLRREAQLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQGELA 186
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
P++ LPA GQGA+ IEI +R +L +L PLNH + AERA+++ GSC++ L A
Sbjct: 187 PSESLPAAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSCQVPLGA 246
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 241
FA + + L ++ +P+G ++TA +GP D + +G A+ L GA +I +
Sbjct: 247 FA---TLADGTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKLIDAGARPLIAA 303
>sp|A9IKF3|HEM3_BORPD Porphobilinogen deaminase OS=Bordetella petrii (strain ATCC BAA-461
/ DSM 12804 / CCUG 43448) GN=hemC PE=3 SV=1
Length = 313
Score = 241 bits (614), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 157/214 (73%), Gaps = 3/214 (1%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A++ G+ADLAVHSLKD+P++L + F LCAIL+R DPRDAF+SN Y +L+ LP AVVGT+
Sbjct: 70 ALLDGRADLAVHSLKDVPVDLQAPFELCAILERADPRDAFVSNQYTTLADLPAGAVVGTS 129
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ I+ +P L +K LRGN+DTRL+KLD+G+YAAI+LAAAGL+RL + +RIR L
Sbjct: 130 SLRRESQIRQRYPHLSVKPLRGNLDTRLSKLDRGDYAAIVLAAAGLQRLGMGERIRSLLE 189
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
P LPA GQGA+ IEI ++R +L E L PL + V AERAVSR GSC++ LAA
Sbjct: 190 PEDSLPAAGQGALGIEIRNDRNDLREWLAPLACSRTTACVVAERAVSRALGGSCQVPLAA 249
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGP 215
+A N + + LRA++ +P+G ++I ++ GP
Sbjct: 250 YA---ELNGNSLALRALVASPDGTRVIRSQHAGP 280
>sp|Q9K0P6|HEM3_NEIMB Porphobilinogen deaminase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=hemC PE=3 SV=1
Length = 311
Score = 239 bits (609), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A+ G+ADLAVHS+KD+PM+LP GF L AI +R +P DAF+SN Y L +P+ AVVGT+
Sbjct: 69 ALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEEMPEGAVVGTS 128
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ +++ +P L+IK LRGN+ TRL+KLD GEY AIILAAAGL+RL L RIRM+ S
Sbjct: 129 SLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLKLDGRIRMILS 188
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
+ LPA GQGA+ IEI +R++L E+L PLNH + V AERA++R GSC++ LAA
Sbjct: 189 ESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARALGGSCQVPLAA 248
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 241
+ N + LR ++ +P+G ++ A+ P + + +G A+ L GA E+I +
Sbjct: 249 YCTEEN---GLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDGARELIGA 305
>sp|C1D679|HEM3_LARHH Porphobilinogen deaminase OS=Laribacter hongkongensis (strain
HLHK9) GN=hemC PE=3 SV=1
Length = 308
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 163/241 (67%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+ +G+ADLAVHS+KD+PM+LP GF L AI +REDPRDAF+S+ Y SLS LP AVVGT
Sbjct: 66 LAMQEGQADLAVHSIKDVPMDLPEGFALAAICEREDPRDAFVSSRYASLSELPAGAVVGT 125
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
SLRR+ I++ +P L++K LRGN+ TRL KLD+G+Y AIILAA+GLKR+ L +RIRM
Sbjct: 126 ASLRRESQIRARYPHLLVKPLRGNLQTRLRKLDEGQYDAIILAASGLKRMGLAERIRMEL 185
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
S LPA GQGA+ IEI +R +LM +L PLNH + V AERA+ R SC+I +
Sbjct: 186 STADSLPAVGQGALGIEIRADRTDLMALLAPLNHPATYACVTAERAMGRALGASCQIPVG 245
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
+A +E + +R + P+G ++ AE P + + +G A+ L +GA ++I
Sbjct: 246 GYA---EQHEHMLVMRGFVATPDGTTLLHAEATAPAEYADALGRTIAKKLLDQGADDVID 302
Query: 241 S 241
+
Sbjct: 303 A 303
>sp|Q9JVS4|HEM3_NEIMA Porphobilinogen deaminase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=hemC PE=3 SV=1
Length = 311
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/240 (48%), Positives = 164/240 (68%), Gaps = 3/240 (1%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A+ G+ADLAVHS+KD+PM+LP GF L AI +R +P DAF+SN Y L +P+ AVVGT+
Sbjct: 69 ALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEEMPEGAVVGTS 128
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ +++ +P L+IK LRGN+ TRL+KLD GEY AIILAAAGL+RL L RIRM+ S
Sbjct: 129 SLRREAQLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLKLDGRIRMILS 188
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
+ LPA GQGA+ IEI +R++L E+L PLNH + V AERA++R GSC++ LAA
Sbjct: 189 ESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARALGGSCQVPLAA 248
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 241
+ N + LR ++ +P+G ++ A+ P + + +G A+ L GA E+I +
Sbjct: 249 YCTEEN---GLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDGARELIGA 305
>sp|Q9KVM1|HEM3_VIBCH Porphobilinogen deaminase OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=hemC PE=3 SV=2
Length = 311
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 160/240 (66%), Gaps = 3/240 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+ADLAVHS+KD+P++ P G L I +REDPRDAF+SN Y + LP A+VGT
Sbjct: 68 IAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
SLRR+ +K+ P L+IK LRGN+ TRL+KLD GEY AIILAAAGLKRL L+ RIR
Sbjct: 128 CSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSFI 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P Q LPA GQGA+ IE N + + +L PLNH + V+ ERA++ G C++ +
Sbjct: 188 EPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++A++ I LRA++ P+G +I+ E+ GP E +G+ AE L +GA EI++
Sbjct: 248 SYALLEG---DTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQGAKEILE 304
>sp|Q15Z15|HEM3_PSEA6 Porphobilinogen deaminase OS=Pseudoalteromonas atlantica (strain
T6c / ATCC BAA-1087) GN=hemC PE=3 SV=1
Length = 309
Score = 234 bits (598), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 171/244 (70%), Gaps = 3/244 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+ +G+AD+AVHS+KD+P++ P+GF L I +RE+P DAF+SN Y S+ LP+ A+VGT
Sbjct: 68 VAMSEGRADIAVHSMKDVPVDFPAGFGLHCICERENPYDAFVSNTYASIEELPQGAIVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ I+S P L I+ LRGN++TRL KLD G+Y AIILAAAGL RL +Q RI+
Sbjct: 128 SSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDDGQYDAIILAAAGLIRLEMQDRIKTYI 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P LPA GQGA+ IE ++ EL+E+L PLNH +E VKAERA++ NG C++ +
Sbjct: 188 EPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHSDTESRVKAERAMNAKLNGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++A++N E+ LR ++ +P+G ++ AE G ++ ++G+ AE L +KGA +I++
Sbjct: 248 SYAVLNG---DELYLRGLVGSPDGSVLLQAEKRGNVNDALSIGVDVAEQLLEKGAGDILQ 304
Query: 241 SYEK 244
+ K
Sbjct: 305 ALYK 308
>sp|Q21XQ9|HEM3_RHOFD Porphobilinogen deaminase OS=Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118) GN=hemC PE=3 SV=1
Length = 315
Score = 233 bits (595), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 145/204 (71%), Gaps = 3/204 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+ G+ADLAVHSLKD+PM LP GF L +++REDPRDAF+SN Y +L++LP+ AVVGT
Sbjct: 64 VALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPRDAFVSNQYANLASLPQGAVVGT 123
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR L+++ P L I+ LRGN+DTRL KLD G YAAI+LAAAGLKRL L +RIR F
Sbjct: 124 SSLRRMALLRALRPDLKIEPLRGNLDTRLRKLDDGMYAAIVLAAAGLKRLGLSQRIRATF 183
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P +LPA GQGA+ IE+ R+++++ L PL H+ + V AERAVSR GSC + LA
Sbjct: 184 EPTDMLPAAGQGALGIEVRSQRQDVIDALAPLAHHTTWLAVSAERAVSRAMGGSCSMPLA 243
Query: 181 AFAMVNNFNESEINLRAIITNPNG 204
A+A + + A +P+G
Sbjct: 244 AYA---TLAADILTIDAAWGDPDG 264
>sp|A7MXU9|HEM3_VIBHB Porphobilinogen deaminase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=hemC PE=3 SV=1
Length = 312
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 163/239 (68%), Gaps = 3/239 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+ADLAVHS+KD+P++ P G L I +REDPRDAF+SN Y ++ LP+ AVVGT
Sbjct: 69 VAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVGT 128
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
SLRR+ +K + P L+IK LRGN+ TRL KLD GEY AIILAAAGLKRL L++RIR
Sbjct: 129 CSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIRSFI 188
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P Q LPA GQGA+ IE + + L+++L PLNH + V+ ERA++ G C++ +
Sbjct: 189 EPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLEGGCQVPIG 248
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
++++++ N I LRA++ P+G I+ E+ G + E +G+ A L + GA +I+
Sbjct: 249 SYSLLDGDN---IWLRALVGEPDGSLIVRGEIRGHRNDAEALGVQLANELLENGARDIL 304
>sp|Q87KI9|HEM3_VIBPA Porphobilinogen deaminase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=hemC PE=3 SV=1
Length = 312
Score = 231 bits (589), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 160/239 (66%), Gaps = 3/239 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+ADLAVHS+KD+P++ P G L I +REDPRDAF+SN Y +++ LP+ AVVGT
Sbjct: 69 VAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNINELPQGAVVGT 128
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
SLRR+ +K + P +IIK LRGN+ TRL KLD GEY AIILAAAGLKRL L+ RIR
Sbjct: 129 CSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEDRIRSFI 188
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P Q LPA GQGA+ IE + + L+++L PLNH + V ERA++ G C++ +
Sbjct: 189 EPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLEGGCQVPIG 248
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
++A++ EI LRA++ P+G +I+ EV G E +G+ A L GA +I+
Sbjct: 249 SYALLEG---DEIWLRALVGEPDGSEIVRGEVRGHRKDGEALGIQLANELLDSGARDIL 304
>sp|A8G848|HEM3_SERP5 Porphobilinogen deaminase OS=Serratia proteamaculans (strain 568)
GN=hemC PE=3 SV=1
Length = 313
Score = 230 bits (586), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 108/241 (44%), Positives = 163/241 (67%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A++ G+AD+AVHS+KD+P++ P+G L I +R+DPRDAF+SN + SL LP+ +VVGT
Sbjct: 68 LALLDGRADIAVHSMKDVPVDFPAGLGLVTICERDDPRDAFVSNRFTSLDQLPQGSVVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ ++ P LI++ LRGN+ TRL+KLD G+Y AIILA AGLKRL L++RIR
Sbjct: 128 SSLRRQCQLRERRPDLIVRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLEQRIRSPL 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
SP + LPA GQGA+ IE + + +L PLNH +E V+AERA++ G C++ +
Sbjct: 188 SPEECLPAVGQGAVGIECRLDDETTRALLAPLNHAVTETRVRAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++A + + LRA++ +P+G +++ E GP E +G+ AE L +GA EI++
Sbjct: 248 SYA---ELDGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGIELAEELLAQGAREILQ 304
Query: 241 S 241
Sbjct: 305 D 305
>sp|B5XYL1|HEM3_KLEP3 Porphobilinogen deaminase OS=Klebsiella pneumoniae (strain 342)
GN=hemC PE=3 SV=1
Length = 313
Score = 230 bits (586), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 161/241 (66%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+AD+AVHS+KD+P+ P G L I +R+DPRDAF+SN Y S+ LP +VVGT
Sbjct: 68 LAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHYASIDELPAGSVVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ + + P L+I+SLRGN+ TRL+KLD GEY AIILAAAGLKRL L+ RIR
Sbjct: 128 SSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLKLEARIRQPL 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
SP Q LPA GQGA+ IE + +L PLNH + V+AERA++ G C++ +
Sbjct: 188 SPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++A + N E+ LRA++ P+G +++ E GP + E +G+ AE L GA +I+
Sbjct: 248 SYAELVN---GELWLRALVGAPDGSQMVRGERRGPAEQAEALGISLAEELLDNGARDILA 304
Query: 241 S 241
+
Sbjct: 305 A 305
>sp|A6TGI8|HEM3_KLEP7 Porphobilinogen deaminase OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=hemC PE=3
SV=1
Length = 313
Score = 229 bits (585), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 159/241 (65%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+AD+AVHS+KD+P+ P G L I +R+DPRDAF+SN Y S+ LP +VVGT
Sbjct: 68 LAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRYASIDELPAGSVVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ + + P L I+SLRGN+ TRL+KLD GEY AIILAAAGLKRL L+ RIR
Sbjct: 128 SSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAGLKRLQLEARIRQPL 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
SP Q LPA GQGA+ IE + +L PLNH + V+AERA++ G C++ +
Sbjct: 188 SPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++A + E+ LRA++ P+G +++ E GP + E +G+ AE L GA EI+
Sbjct: 248 SYA---ELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISLAEELLDNGAREILA 304
Query: 241 S 241
+
Sbjct: 305 A 305
>sp|Q8XWW3|HEM3_RALSO Porphobilinogen deaminase OS=Ralstonia solanacearum (strain
GMI1000) GN=hemC PE=3 SV=1
Length = 334
Score = 227 bits (579), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 153/206 (74%), Gaps = 2/206 (0%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+ +G+ADLAVHSLKD+PM LP GF+L AIL+REDPRDAF+SNDY L+ LP AVVGT
Sbjct: 84 VALAEGRADLAVHSLKDVPMELPPGFVLSAILEREDPRDAFVSNDYADLAALPAGAVVGT 143
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ +++ FP L+I+ LRGN+DTRL+KLD+G+YAAIILAAAGLKRL L +RIR +
Sbjct: 144 SSLRREASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSERIRAVI 203
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
+P LPA GQGA+ IE +R ++ L PL+H + V AERAVSR GSC++ LA
Sbjct: 204 APETSLPAAGQGALGIESRVDRHDVQAWLAPLHHAPTALAVTAERAVSRQLGGSCQVPLA 263
Query: 181 AFAMVNNFNESEINLRAIITNPNGLK 206
AFA + + LRA + +P+G +
Sbjct: 264 AFAQWTDAG--ALRLRAFVASPDGRR 287
>sp|B7VMD9|HEM3_VIBSL Porphobilinogen deaminase OS=Vibrio splendidus (strain LGP32)
GN=hemC PE=3 SV=1
Length = 312
Score = 227 bits (578), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/239 (46%), Positives = 161/239 (67%), Gaps = 3/239 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+ADLAVHS+KD+P++ P G L I +REDPRDAF+SN Y ++ LP+ AVVGT
Sbjct: 69 VAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVGT 128
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
SLRR+ + + P LIIK LRGN+ TRL KLD G+Y AI+LAAAGLKRL L++RIR
Sbjct: 129 CSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEERIRSFI 188
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P Q LPA GQGA+ IE + + L+++L PLNH + V ERA++ G C++ +
Sbjct: 189 EPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGCQVPIG 248
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
++++++ N I LRA++ P+G K++ E++G E +G+ A L GA EI+
Sbjct: 249 SYSLLDGDN---IWLRALVGEPDGSKMVRGEISGLRKDAEALGVTLANQLLDDGAREIL 304
>sp|Q31JG5|HEM3_THICR Porphobilinogen deaminase OS=Thiomicrospira crunogena (strain
XCL-2) GN=hemC PE=3 SV=1
Length = 309
Score = 226 bits (577), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 156/239 (65%), Gaps = 3/239 (1%)
Query: 3 IIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNS 62
++ G+AD+AVHS+KD+PM LP GF L AIL+R +P DAF+SNDY LP+ AV+GT+S
Sbjct: 69 MLAGEADIAVHSMKDVPMVLPEGFALGAILERHEPTDAFVSNDYAHFEELPQGAVLGTSS 128
Query: 63 LRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSP 122
LRRK + + P L++K LRGN+ TRL KLD G+Y AI+LA +GLKRL L +RIR SP
Sbjct: 129 LRRKAQLMAARPDLVVKDLRGNVGTRLGKLDAGDYDAIVLATSGLKRLELDERIRHELSP 188
Query: 123 NQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAF 182
LPA QG + IE + E++E++ LNH +E AERA++ G C++ + +
Sbjct: 189 ETCLPAVSQGTLGIEYFEKDPEVLELIQVLNHRDTEIRTLAERAMNHRLEGGCQVPIGVY 248
Query: 183 AMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 241
A + +I LR ++ +G +I+ +E G PET+G+Y AE L ++GA EI+K
Sbjct: 249 A---ELEDDQIYLRGLVGALDGSEILRSEARGSQKDPETLGVYVAEQLLEQGAGEILKE 304
>sp|Q5QUS3|HEM3_IDILO Porphobilinogen deaminase OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=hemC PE=3 SV=1
Length = 313
Score = 226 bits (576), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 158/241 (65%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+AD+AVHS+KD+P+ P G L I +REDPRDAF+SN+Y +L+ LP+ AVVGT
Sbjct: 67 VAMLEGRADIAVHSMKDLPVEFPPGLELHTICEREDPRDAFVSNNYKNLNELPEGAVVGT 126
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
SLRR+ +K FP L+IK LRGN+ TRL KLD+GE+ AIILAA+GL RL L RI
Sbjct: 127 CSLRRRCQVKEQFPHLVIKDLRGNVQTRLRKLDEGEFDAIILAASGLIRLELGDRITSFI 186
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
Q LPA GQGA+ IE + E+ +L PL + V AERA++R +G C++ +
Sbjct: 187 PVEQSLPANGQGALGIECRSDDDEMKALLAPLQCQETRTRVLAERAMNRGLDGGCQVPIG 246
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
A+A + E+ LR ++ P+G K++ EV GP E +G AE L K+GA EI+
Sbjct: 247 AYAELEG---DEVYLRGLVGEPDGGKVLRDEVRGPASKAEELGSELAERLLKQGAAEILS 303
Query: 241 S 241
+
Sbjct: 304 A 304
>sp|C6DHC2|HEM3_PECCP Porphobilinogen deaminase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=hemC PE=3 SV=1
Length = 313
Score = 226 bits (575), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 159/241 (65%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+AD+AVHS+KD+P+ P G L I +R+DPRDAF+SN Y SL LP+ + VGT
Sbjct: 68 LALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQLPEGSCVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ +++ P L+I+ LRGN+ TRL KLD GEY AIILA AGLKRL L++RIR
Sbjct: 128 SSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLGLEERIRCAL 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
SP + LPA GQGAI IE N + ++L PLNH + V+AERA++ G C++ +
Sbjct: 188 SPEESLPAVGQGAIGIECRLNDDRIRQLLAPLNHPATAARVQAERAMNVRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++A + LRA++ P+G ++I E G + E +G+ AE L KGA I++
Sbjct: 248 SYA---ELEGDTLWLRALVGAPDGSQMIVGERRGNVSDAEQIGIALAEELLAKGASAILQ 304
Query: 241 S 241
+
Sbjct: 305 A 305
>sp|Q0VM28|HEM3_ALCBS Porphobilinogen deaminase OS=Alcanivorax borkumensis (strain SK2 /
ATCC 700651 / DSM 11573) GN=hemC PE=3 SV=1
Length = 310
Score = 225 bits (573), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 158/240 (65%), Gaps = 3/240 (1%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A++ G+AD+AVHS+KD+PM LP GF L I +REDPRDAF+SN + LS+LP A VGT+
Sbjct: 69 AMMDGRADIAVHSMKDVPMELPPGFALPVICEREDPRDAFVSNTFDGLSSLPHGACVGTS 128
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ +K+ P L++ SLRGN+ TRL KLD G + AIILAAAGLKRL + RIR
Sbjct: 129 SLRRQAQVKANRPDLVVNSLRGNVQTRLGKLDAGNFDAIILAAAGLKRLEMHDRIRYEMP 188
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
P + LPA GQGA+ IE + + +E+L PL+ + V AERA++R G C++ +A
Sbjct: 189 PEESLPAVGQGAVGIECREGDESTIELLSPLSDVDTWDRVVAERAMNRRLEGGCQVPIAG 248
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 241
FA++ + ++ LR ++ +G +++ AE P +G+ AE L +GA EI+K+
Sbjct: 249 FALLED---GQLWLRGLVAEEDGSRVLRAEGTAPRGQGAELGIDIAEQLLAQGADEILKA 305
>sp|Q6CZG3|HEM3_ERWCT Porphobilinogen deaminase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=hemC PE=3 SV=1
Length = 313
Score = 223 bits (568), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 158/241 (65%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+AD+AVHS+KD+P+ P G L I +R+DPRDAF+SN Y SL LP+ + VGT
Sbjct: 68 LALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQLPEGSCVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ +++ P L+I+ LRGN+ TRL KLD GEY AIILA AGLKRL L++RIR
Sbjct: 128 SSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLGLEERIRCAL 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
SP + LPA GQGAI IE + + ++L PLNH + V AERA++ G C++ +
Sbjct: 188 SPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++A + LRA++ P+G ++I E G + E +G+ AE L KGA I++
Sbjct: 248 SYA---ELEGDTLWLRALVGAPDGSQMIVGERKGSVSDAEKIGVALAEELLAKGASAILQ 304
Query: 241 S 241
+
Sbjct: 305 A 305
>sp|B0TJ54|HEM3_SHEHH Porphobilinogen deaminase OS=Shewanella halifaxensis (strain
HAW-EB4) GN=hemC PE=3 SV=1
Length = 310
Score = 223 bits (568), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 158/241 (65%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++GKAD+AVHS+KD+P+ P G L I +REDPRDAF+SN Y ++ LP+ AVVGT
Sbjct: 68 VAMLEGKADIAVHSMKDVPVEFPEGLGLEVICEREDPRDAFVSNTYKTIEDLPQGAVVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ I++ P L+IK LRGN+ TRL KLD G Y AIILAAAGLKRL L++RI
Sbjct: 128 SSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEERIASFI 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
S Q LPA GQGA+ IE + + +L PL H + V AERA++ G C++ +
Sbjct: 188 SAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
A+A ++ ++LR ++ NP+G +IITA +G E +G+ AE L KGA I+
Sbjct: 248 AYAEIDG---DTLSLRGLVGNPDGSQIITAASSGNKADAEKLGVALAEELLAKGAKTILD 304
Query: 241 S 241
+
Sbjct: 305 A 305
>sp|A8GZG4|HEM3_SHEPA Porphobilinogen deaminase OS=Shewanella pealeana (strain ATCC
700345 / ANG-SQ1) GN=hemC PE=3 SV=1
Length = 310
Score = 223 bits (567), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 158/241 (65%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G AD+AVHS+KD+P++ P G L I +REDPRDAF+SN Y ++ LP+ AVVGT
Sbjct: 68 VAMLEGLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKTIEDLPQGAVVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ I++ P L+IK LRGN+ TRL KLD G Y AIILAAAGLKRL L++RI
Sbjct: 128 SSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEERIASFI 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
S Q LPA GQGA+ IE + + +L PL H + V AERA++ G C++ +
Sbjct: 188 SAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
A+A ++ ++LR ++ NP+G +IITA +G E +G+ AE L KGA I+
Sbjct: 248 AYAEIDG---DTLSLRGLVGNPDGSQIITASSSGSTADAEKLGVALAEELLSKGAKTILD 304
Query: 241 S 241
+
Sbjct: 305 A 305
>sp|B5FF97|HEM3_VIBFM Porphobilinogen deaminase OS=Vibrio fischeri (strain MJ11) GN=hemC
PE=3 SV=1
Length = 311
Score = 222 bits (566), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/240 (46%), Positives = 155/240 (64%), Gaps = 3/240 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+ADLAVHS+KD+P+ P G L I +REDPRDAF+SN Y ++ LP+ AVVGT
Sbjct: 69 VAMLEGRADLAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVGT 128
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
SLRR+ +K P LIIK LRGN+ TRL KLD G Y AIILA AGL RL L+ RI+
Sbjct: 129 CSLRRQCQLKEARPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRLGLEDRIKSAI 188
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P Q LPA GQGA+ IE + L +L PLNH + V ERA++ G C++ +
Sbjct: 189 EPEQSLPAVGQGAVGIEARLDDDRLRALLEPLNHPETANRVLCERAMNNRLEGGCQVPIG 248
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++++++ +I LRA++ P+G +I EV+GP+ E +G A+ L GA EI++
Sbjct: 249 SYSLIDG---DQIWLRALVGEPDGSVMIRGEVSGPVSDAEALGTQLADQLLNDGAKEILE 305
>sp|Q5E8T5|HEM3_VIBF1 Porphobilinogen deaminase OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=hemC PE=3 SV=1
Length = 311
Score = 222 bits (566), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/240 (46%), Positives = 155/240 (64%), Gaps = 3/240 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+ADLAVHS+KD+P+ P G L I +REDPRDAF+SN Y ++ LP+ AVVGT
Sbjct: 69 VAMLEGRADLAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVGT 128
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
SLRR+ +K P LIIK LRGN+ TRL KLD G Y AIILA AGL RL L+ RI+
Sbjct: 129 CSLRRQCQLKEARPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRLGLEDRIKSAI 188
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P Q LPA GQGA+ IE + L +L PLNH + V ERA++ G C++ +
Sbjct: 189 EPEQSLPAVGQGAVGIEARLDDDRLRALLEPLNHPETANRVLCERAMNNRLEGGCQVPIG 248
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++++++ +I LRA++ P+G +I EV+GP+ E +G A+ L GA EI++
Sbjct: 249 SYSLIDG---DQIWLRALVGEPDGSVMIRGEVSGPVSDAEALGTQLADQLLNDGAKEILE 305
>sp|Q3SFT5|HEM3_THIDA Porphobilinogen deaminase OS=Thiobacillus denitrificans (strain
ATCC 25259) GN=hemC PE=3 SV=1
Length = 306
Score = 221 bits (564), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/241 (46%), Positives = 153/241 (63%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+ G+ADLAVHS+KD+PM LP GF L I +REDPRDAF+SN Y LS LP +VVGT
Sbjct: 66 VALAAGEADLAVHSMKDVPMELPPGFELAVIGEREDPRDAFVSNRYARLSDLPPGSVVGT 125
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ +++ +P L +K LRGN+ TRL KLD+G++ AI+LAAAGLKRL L RI+ L
Sbjct: 126 SSLRREAQLRARYPHLTVKPLRGNVGTRLKKLDEGQFDAILLAAAGLKRLGLGARIKSLL 185
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
S + +PA GQGA+ IEI + ML PLN + V+AER VSR GSC++ L
Sbjct: 186 SVEESIPAAGQGALGIEIRSGNTAVAAMLAPLNDPVTAACVRAERQVSRVLGGSCQVPLG 245
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
A A ++ + + L + P+G + + G PE VG A+ L +GA ++
Sbjct: 246 AHA---SYKDGRLLLEGFVAKPDGSRFLVDRAEGDASDPEAVGQALADKLLAQGARAVLD 302
Query: 241 S 241
+
Sbjct: 303 A 303
>sp|Q602K3|HEM3_METCA Porphobilinogen deaminase OS=Methylococcus capsulatus (strain ATCC
33009 / NCIMB 11132 / Bath) GN=hemC PE=3 SV=2
Length = 322
Score = 220 bits (561), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 154/240 (64%), Gaps = 3/240 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+++G+AD+AVHS+KD+P+ P G L AIL+REDPRDA +S+ Y S + LP +A +GT
Sbjct: 80 QGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPADARIGT 139
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ IK P + LRGN++TRL KLD GE+ AI+LA+AGLKRL Q+RI
Sbjct: 140 SSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGFQERIAETL 199
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
+P Q LPA GQGAI +E +L+PL+H + V AERA++R +G C++ +A
Sbjct: 200 TPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLDGGCQVPIA 259
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
FA + ++LR ++ NP+G II AE G T E +G AE L +GA EI++
Sbjct: 260 GFAQLEG---DTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHLLDQGADEILR 316
>sp|Q9CK24|HEM3_PASMU Porphobilinogen deaminase OS=Pasteurella multocida (strain Pm70)
GN=hemC PE=3 SV=2
Length = 309
Score = 220 bits (560), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 158/240 (65%), Gaps = 4/240 (1%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A++KG+AD+AVHS+KD+PM P+G +L I +REDPRDAF+SN Y +L LP AVVGT+
Sbjct: 70 ALLKGEADIAVHSMKDVPMQFPAGLMLSTICQREDPRDAFVSNSYRTLMELPAGAVVGTS 129
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ +K P L I SLRGN+ TRL KLD G+Y AIILAAAGL RL Q+RI L
Sbjct: 130 SLRRQCQLKQLRPDLHIHSLRGNVGTRLAKLDNGDYDAIILAAAGLIRLGQQQRITSLID 189
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
Q LPA GQGA+ IE E+ +L PL + V AERA++R+ G C++ +A
Sbjct: 190 VTQCLPAVGQGAVGIEC-RQEAEIELLLAPLADPETTACVLAERAMNRHLQGGCQVPIAG 248
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 241
+A++ E ++ LRA++ +G I+ AE + ET+G+ AE L ++GA +I+++
Sbjct: 249 YAII---EEGQLFLRALVGEVDGSSILRAEGRSAVADAETLGIQVAEKLLQQGADKILQT 305
>sp|B4F1X3|HEM3_PROMH Porphobilinogen deaminase OS=Proteus mirabilis (strain HI4320)
GN=hemC PE=3 SV=1
Length = 313
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 156/241 (64%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A++ +AD+AVHS+KD+P++ P G L I +REDPRDAF+SN Y SL LP +VVGT
Sbjct: 68 LALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQLPAGSVVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ +K+ P LII+ LRGN+ TRL+KLD G+Y AIILA AGLKRL L +RIR
Sbjct: 128 SSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLKLTERIRSSL 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
S Q LPA GQGA+ IE + + +L LNH + VKAERA++ G C++ +
Sbjct: 188 SAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++A+ N +I LRA++ +P+G I+ E + E G+ AE L KGA EI+
Sbjct: 248 SYAIWQN---GKIWLRALVGSPDGETILRGERLVSPEDAEQAGISLAEELLDKGAREILT 304
Query: 241 S 241
+
Sbjct: 305 A 305
>sp|Q7MYN1|HEM3_PHOLL Porphobilinogen deaminase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=hemC PE=3 SV=1
Length = 313
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 159/240 (66%), Gaps = 5/240 (2%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+AD+AVHS+KD+P++ P G L I +R+DPRDAF+S Y SL LP ++VGT
Sbjct: 68 LALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSVKYHSLDELPTGSIVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ ++ P LI++ LRGN+ TRLNKLD G Y AIILA AGLKRL L +RIR
Sbjct: 128 SSLRRQCQLRELRPDLIVRDLRGNVGTRLNKLDNGHYDAIILAVAGLKRLKLHERIRTPL 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
+ Q LPA GQGA+ IE + ++ +L PLNHY +E V AERA++ G C++ +
Sbjct: 188 TAEQSLPAVGQGAVGIECRLDDQQTQTLLAPLNHYDTEVCVLAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNG-PIDTPETVGLYAAELLKKKGAIEII 239
++A+ + + +I LRA++ P+G II E P D + G+ AE L ++GA EI+
Sbjct: 248 SYAI---WQDGKIWLRALVGAPDGSVIIRGERTALPKDACQA-GVELAEELLERGAREIL 303
>sp|Q66G00|HEM3_YERPS Porphobilinogen deaminase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=hemC PE=3 SV=1
Length = 313
Score = 219 bits (557), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 154/241 (63%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A++ G+AD+AVHS+KD+P+ P G L AI +REDPRDAF+S+ Y L LP +VVGT
Sbjct: 68 LALLDGRADIAVHSMKDVPIAFPEGLGLVAICEREDPRDAFVSSHYAHLDDLPAGSVVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ ++ P LII+ LRGN+ TRL KLD G+Y AIILA AGLKRL L+ RIR
Sbjct: 128 SSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLGLETRIRYAM 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
S + LPA GQGA+ IE + ++L PLNH +E V AERA++ G C++ +
Sbjct: 188 SAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++A + LRA++ P+G ++I E GP E +G+ A+ L +GA EI+
Sbjct: 248 SYA---ELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRGAREILA 304
Query: 241 S 241
+
Sbjct: 305 A 305
>sp|B2K065|HEM3_YERPB Porphobilinogen deaminase OS=Yersinia pseudotuberculosis serotype
IB (strain PB1/+) GN=hemC PE=3 SV=1
Length = 313
Score = 219 bits (557), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 154/241 (63%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A++ G+AD+AVHS+KD+P+ P G L AI +REDPRDAF+S+ Y L LP +VVGT
Sbjct: 68 LALLDGRADIAVHSMKDVPIAFPEGLGLVAICEREDPRDAFVSSHYAHLDDLPAGSVVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ ++ P LII+ LRGN+ TRL KLD G+Y AIILA AGLKRL L+ RIR
Sbjct: 128 SSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLGLETRIRYAM 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
S + LPA GQGA+ IE + ++L PLNH +E V AERA++ G C++ +
Sbjct: 188 SAEESLPAVGQGAVGIECRLDDDHTRQLLAPLNHRHTELRVCAERAMNIRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++A + LRA++ P+G ++I E GP E +G+ A+ L +GA EI+
Sbjct: 248 SYA---ELEGDTLWLRALVGAPDGSQMIRGERRGPAAEAEQMGIELADELLSRGAREILA 304
Query: 241 S 241
+
Sbjct: 305 A 305
>sp|A1RPD7|HEM3_SHESW Porphobilinogen deaminase OS=Shewanella sp. (strain W3-18-1)
GN=hemC PE=3 SV=1
Length = 310
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 155/245 (63%), Gaps = 3/245 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+AI++ +AD+AVHS+KD+P++ P G L I +REDPRDAF+SN Y ++S LP A VGT
Sbjct: 68 VAILEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKTISELPLGATVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ +++ P LIIK LRGN+ TRL KLD GEY AIILAAAGL RL L RI
Sbjct: 128 SSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLKLSGRIASFI 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
S Q LPA GQGA+ IE N + + +L PL H + V AERA++ G C++ +
Sbjct: 188 SAEQSLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
AFA +N E+ LR ++ NP+G +II + GP +G+ AE L KGA I+
Sbjct: 248 AFAEING---DEMTLRGLVGNPDGSEIIEGIITGPKTEATQLGVALAEELLSKGAKSILD 304
Query: 241 SYEKK 245
+ K
Sbjct: 305 AVYAK 309
>sp|A4YBG2|HEM3_SHEPC Porphobilinogen deaminase OS=Shewanella putrefaciens (strain CN-32
/ ATCC BAA-453) GN=hemC PE=3 SV=1
Length = 310
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 155/245 (63%), Gaps = 3/245 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+AI++ +AD+AVHS+KD+P++ P G L I +REDPRDAF+SN Y ++S LP A VGT
Sbjct: 68 VAILEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKTISELPLGATVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ +++ P LIIK LRGN+ TRL KLD GEY AIILAAAGL RL L RI
Sbjct: 128 SSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLKLSGRIASFI 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
S Q LPA GQGA+ IE N + + +L PL H + V AERA++ G C++ +
Sbjct: 188 SAEQSLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
AFA +N E+ LR ++ NP+G +II + GP +G+ AE L KGA I+
Sbjct: 248 AFAEING---DEMTLRGLVGNPDGSEIIEGIITGPKTEATQLGVALAEELLSKGAKSILD 304
Query: 241 SYEKK 245
+ K
Sbjct: 305 AVYAK 309
>sp|B7N295|HEM3_ECO81 Porphobilinogen deaminase OS=Escherichia coli O81 (strain ED1a)
GN=hemC PE=3 SV=1
Length = 313
Score = 218 bits (555), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 152/239 (63%), Gaps = 3/239 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++ +AD+AVHS+KD+P+ P G L I KREDPRDAF+SN Y SL LP ++VGT
Sbjct: 68 VALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDALPAGSIVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ + P LII+SLRGN+ TRL+KLD GEY AIILA AGLKRL L+ RIR
Sbjct: 128 SSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAAL 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P LPA GQGA+ IE + E+L LNH+ + V AERA++ G C++ +
Sbjct: 188 PPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
++A + EI LRA++ P+G +II E G E +G+ AE L GA EI+
Sbjct: 248 SYA---ELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREIL 303
>sp|B7MH66|HEM3_ECO45 Porphobilinogen deaminase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=hemC PE=3 SV=1
Length = 313
Score = 218 bits (555), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/239 (47%), Positives = 152/239 (63%), Gaps = 3/239 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++ +AD+AVHS+KD+P+ P G L I KREDPRDAF+SN Y SL LP ++VGT
Sbjct: 68 VALLENRADIAVHSMKDVPVEFPQGLGLVTICKREDPRDAFVSNTYDSLDALPAGSIVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ + P LII+SLRGN+ TRL+KLD GEY AIILA AGLKRL L+ RIR
Sbjct: 128 SSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAAL 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P LPA GQGA+ IE + E+L LNH+ + V AERA++ G C++ +
Sbjct: 188 PPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
++A + EI LRA++ P+G +II E G E +G+ AE L GA EI+
Sbjct: 248 SYA---ELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREIL 303
>sp|B4E8C4|HEM3_BURCJ Porphobilinogen deaminase OS=Burkholderia cepacia (strain J2315 /
LMG 16656) GN=hemC PE=3 SV=1
Length = 334
Score = 218 bits (555), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/243 (49%), Positives = 166/243 (68%), Gaps = 6/243 (2%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A+ G+ADLAVHSLKD+PM LP GF L AI++REDPRDAF+SNDY SL LP AVVGT+
Sbjct: 82 ALADGRADLAVHSLKDVPMALPDGFALAAIMEREDPRDAFVSNDYASLDALPAGAVVGTS 141
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ +++S +P L + LRGN+DTRL KLD+G+YAAIILAAAGLKRL L+ RIR L
Sbjct: 142 SLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRALLD 201
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
PA GQGA+ IEI +R ++ L PL+ + V+AER VSR GSC++ LAA
Sbjct: 202 VEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPRTALAVEAERMVSRALGGSCEVPLAA 261
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPE---TVGLYAAELLKKKGAIEI 238
A+ + E+ L ++ +G +++TAE G + T +G ++ L+ +GA++I
Sbjct: 262 HAV---WRAGELYLTGRVSTTDGKRVLTAEECGAVMTVADALALGRAVSDELEAQGALDI 318
Query: 239 IKS 241
+++
Sbjct: 319 VQA 321
>sp|B6EPK1|HEM3_ALISL Porphobilinogen deaminase OS=Aliivibrio salmonicida (strain
LFI1238) GN=hemC PE=3 SV=1
Length = 311
Score = 218 bits (555), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/239 (44%), Positives = 151/239 (63%), Gaps = 3/239 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++G+ADLAVHS+KD+P+ P G L I +R DPRDAF+SN Y ++ LP+ A VGT
Sbjct: 69 VAMLEGRADLAVHSMKDVPVEFPEGLGLVTICERGDPRDAFVSNTYNNIDELPQGATVGT 128
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
SLRR+ +K + P LIIK LRGN+ TRL KLD G Y AIILA AGL RL L+ RI+
Sbjct: 129 CSLRRQCQLKEYRPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRLGLEDRIKSSI 188
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
P Q LPA GQGA+ IE N + +L PLNH + V ERA++ G C++ +
Sbjct: 189 EPEQSLPAVGQGAVGIETRLNDDRIRALLAPLNHPETAHRVLCERAMNNRLEGGCQVPIG 248
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
++++++ +I LRA++ P+G ++ E GP+ E +G AE L GA +I+
Sbjct: 249 SYSLIDG---DQIWLRALVGEPDGSIMVRGETTGPVSDAEELGTKLAEQLLNDGAKDIL 304
>sp|Q59684|HEM3_PROMI Porphobilinogen deaminase OS=Proteus mirabilis GN=hemC PE=3 SV=1
Length = 313
Score = 218 bits (554), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 155/241 (64%), Gaps = 3/241 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A++ +AD+AVHS+KD+P++ P G L I +REDPRDAF+SN Y SL LP +VVGT
Sbjct: 68 LALLSSRADIAVHSMKDVPIDFPEGLGLVTICEREDPRDAFVSNHYDSLEQLPAGSVVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ +K+ P LII+ LRGN+ TRL+KLD G+Y AIILA AGLKRL L +RIR
Sbjct: 128 SSLRRQCQLKALRPDLIIRDLRGNVGTRLSKLDNGDYDAIILAVAGLKRLKLTERIRSSL 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
S Q LPA GQGA+ IE + + +L LNH + VKAERA++ G C++ +
Sbjct: 188 SAEQSLPAVGQGAVGIECRLDDHDTQALLAALNHADTATCVKAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
++A+ N +I LRA++ P+G I+ E + E G+ AE L KGA EI+
Sbjct: 248 SYAIWQN---DKIWLRALVGAPDGKTILRGERLVSPEDAEQAGISLAEELLDKGAREILT 304
Query: 241 S 241
+
Sbjct: 305 A 305
>sp|Q2T071|HEM3_BURTA Porphobilinogen deaminase OS=Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=hemC
PE=3 SV=1
Length = 329
Score = 218 bits (554), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 149/212 (70%), Gaps = 3/212 (1%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A+ G+ADLAVHSLKD+PM LP+GF L A++ REDPRDAF+SNDY SL LP AVVGT+
Sbjct: 77 ALADGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAGAVVGTS 136
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ ++++ +P L ++ LRGN+DTRL KLD+G+YAAIILAAAGLKRL L RIR L
Sbjct: 137 SLRREAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRALLD 196
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
LPA GQGA+ IEI R ++ L PL+ + + V+AERAVSR GSC++ LAA
Sbjct: 197 VEDSLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSCEVPLAA 256
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVN 213
A+ + E++L ++ +G +++ A
Sbjct: 257 HAV---WRGDELHLTGSVSTTDGARVLAARAQ 285
>sp|A7MQJ1|HEM3_CROS8 Porphobilinogen deaminase OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=hemC PE=3 SV=1
Length = 313
Score = 218 bits (554), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 153/239 (64%), Gaps = 3/239 (1%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A++ G+AD+AVHS+KD+P+ P G L I +REDPRDAF+SN Y SL +P ++VGT
Sbjct: 68 LAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYKSLDEMPAGSIVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ I + P LII+SLRGN+ TRL+KLD G+Y AIILA AGLKRL L RI
Sbjct: 128 SSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQLDARITSPL 187
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
+P LPA GQGA+ IE + E+L PLNH + V+AERA++ G C++ +
Sbjct: 188 APEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRLEGGCQVPIG 247
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
++A + E+ LRA++ P+G +I+ E G + +G+ AE L GA EI+
Sbjct: 248 SYA---ELRDGELWLRALVGAPDGSRIVRGERRGAPEDARQLGISLAEELLNHGAREIL 303
>sp|B1JWR0|HEM3_BURCC Porphobilinogen deaminase OS=Burkholderia cenocepacia (strain
MC0-3) GN=hemC PE=3 SV=1
Length = 334
Score = 218 bits (554), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/243 (49%), Positives = 166/243 (68%), Gaps = 6/243 (2%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A+ G+ADLAVHSLKD+PM LP GF L AI++REDPRDAF+SNDY SL LP AVVGT+
Sbjct: 82 ALADGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGAVVGTS 141
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR+ +++S +P L + LRGN+DTRL KLD+G+YAAIILAAAGLKRL L+ RIR L
Sbjct: 142 SLRREAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRALLD 201
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
PA GQGA+ IEI +R ++ L PL+ + V+AER VSR GSC++ LAA
Sbjct: 202 VEASPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSCEVPLAA 261
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPE---TVGLYAAELLKKKGAIEI 238
A+ + E+ L ++ +G +++TAE G + T +G ++ L+ +GA++I
Sbjct: 262 HAV---WRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGALDI 318
Query: 239 IKS 241
+++
Sbjct: 319 VQA 321
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,787,371
Number of Sequences: 539616
Number of extensions: 3336097
Number of successful extensions: 9168
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 8166
Number of HSP's gapped (non-prelim): 483
length of query: 245
length of database: 191,569,459
effective HSP length: 114
effective length of query: 131
effective length of database: 130,053,235
effective search space: 17036973785
effective search space used: 17036973785
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)