Your job contains 1 sequence.
>psy11424
MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT
NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF
SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA
AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK
SYEKK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11424
(245 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P06983 - symbol:hemC species:83333 "Escherichia... 529 6.5e-51 1
TIGR_CMR|BA_4696 - symbol:BA_4696 "porphobilinogen deamin... 427 4.2e-40 1
ZFIN|ZDB-GENE-040426-1375 - symbol:hmbsa "hydroxymethylbi... 391 3.2e-39 2
TIGR_CMR|CHY_1208 - symbol:CHY_1208 "porphobilinogen deam... 409 3.4e-38 1
UNIPROTKB|F1NKN8 - symbol:HMBS "Uncharacterized protein" ... 376 1.9e-37 2
TIGR_CMR|SPO_3649 - symbol:SPO_3649 "porphobilinogen deam... 392 2.1e-36 1
MGI|MGI:96112 - symbol:Hmbs "hydroxymethylbilane synthase... 365 5.7e-36 2
RGD|2801 - symbol:Hmbs "hydroxymethylbilane synthase" spe... 364 7.2e-36 2
UNIPROTKB|Q5M893 - symbol:Hmbs "Hydroxymethylbilane synth... 364 7.2e-36 2
CGD|CAL0000854 - symbol:HEM3 species:5476 "Candida albica... 387 7.2e-36 1
UNIPROTKB|O94048 - symbol:HEM3 "Porphobilinogen deaminase... 387 7.2e-36 1
TAIR|locus:2150758 - symbol:HEMC "hydroxymethylbilane syn... 385 1.2e-35 1
UNIPROTKB|Q2KIN5 - symbol:HMBS "Porphobilinogen deaminase... 360 2.4e-35 2
DICTYBASE|DDB_G0284697 - symbol:hemC "porphobilinogen dea... 381 3.1e-35 1
UNIPROTKB|E2RTD6 - symbol:HMBS "Uncharacterized protein" ... 357 3.9e-35 2
ZFIN|ZDB-GENE-050522-491 - symbol:hmbsb "hydroxymethylbil... 380 4.0e-35 1
UNIPROTKB|P08397 - symbol:HMBS "Porphobilinogen deaminase... 354 5.0e-35 2
TIGR_CMR|CJE_0649 - symbol:CJE_0649 "porphobilinogen deam... 377 8.3e-35 1
TIGR_CMR|ECH_0701 - symbol:ECH_0701 "porphobilinogen deam... 369 5.8e-34 1
POMBASE|SPAC24B11.13 - symbol:hem3 "hydroxymethylbilane s... 362 3.2e-33 1
UNIPROTKB|F6Q2D2 - symbol:HMBS "Uncharacterized protein" ... 332 2.1e-32 2
ASPGD|ASPL0000052688 - symbol:hemC species:162425 "Emeric... 354 2.3e-32 1
UNIPROTKB|P64336 - symbol:hemC "Porphobilinogen deaminase... 353 2.9e-32 1
SGD|S000002364 - symbol:HEM3 "Porphobilinogen deaminase" ... 351 4.7e-32 1
FB|FBgn0010786 - symbol:l(3)02640 "lethal (3) 02640" spec... 338 1.2e-31 2
UNIPROTKB|F5H345 - symbol:HMBS "Porphobilinogen deaminase... 313 9.9e-31 2
TIGR_CMR|APH_0746 - symbol:APH_0746 "porphobilinogen deam... 331 6.2e-30 1
UNIPROTKB|G4N2C1 - symbol:MGG_04860 "Porphobilinogen deam... 326 2.1e-29 1
UNIPROTKB|G3V1P4 - symbol:HMBS "Hydroxymethylbilane synth... 296 5.9e-29 2
UNIPROTKB|G5EA58 - symbol:HMBS "Porphobilinogen deaminase... 296 5.9e-29 2
UNIPROTKB|F5GY90 - symbol:HMBS "Porphobilinogen deaminase... 275 5.3e-24 1
TIGR_CMR|NSE_0385 - symbol:NSE_0385 "putative porphobilin... 273 8.7e-24 1
UNIPROTKB|F5H226 - symbol:HMBS "Porphobilinogen deaminase... 208 6.7e-17 1
GENEDB_PFALCIPARUM|PFL0480w - symbol:PFL0480w "porphobili... 130 5.3e-14 2
UNIPROTKB|Q8I5V3 - symbol:PBGD "Porphobilinogen deaminase... 130 5.3e-14 2
UNIPROTKB|F5H0P4 - symbol:HMBS "Porphobilinogen deaminase... 117 7.6e-07 1
>UNIPROTKB|P06983 [details] [associations]
symbol:hemC species:83333 "Escherichia coli K-12"
[GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA;IMP] [GO:0006783 "heme biosynthetic process"
evidence=IMP] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IMP] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006782
"protoporphyrinogen IX biosynthetic process" evidence=IEA]
HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
UniPathway:UPA00251 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006783
EMBL:M87049 GO:GO:0006782 EMBL:X66782 eggNOG:COG0181
HOGENOM:HOG000228588 KO:K01749 GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF ProtClustDB:PRK00072 EMBL:X04242
EMBL:X12614 PIR:F65184 RefSeq:YP_026260.1 RefSeq:YP_491637.1
PDB:1AH5 PDB:1GTK PDB:1PDA PDB:1YPN PDB:2YPN PDBsum:1AH5
PDBsum:1GTK PDBsum:1PDA PDBsum:1YPN PDBsum:2YPN
ProteinModelPortal:P06983 SMR:P06983 DIP:DIP-9879N IntAct:P06983
MINT:MINT-1302039 PRIDE:P06983 EnsemblBacteria:EBESCT00000000652
EnsemblBacteria:EBESCT00000014936 GeneID:12930663 GeneID:947759
KEGG:ecj:Y75_p3373 KEGG:eco:b3805 PATRIC:32123109 EchoBASE:EB0424
EcoGene:EG10429 BioCyc:EcoCyc:OHMETHYLBILANESYN-MONOMER
BioCyc:ECOL316407:JW5932-MONOMER
BioCyc:MetaCyc:OHMETHYLBILANESYN-MONOMER EvolutionaryTrace:P06983
Genevestigator:P06983 Uniprot:P06983
Length = 313
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 114/240 (47%), Positives = 156/240 (65%)
Query: 1 MAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGT 60
+A+++ +AD+AVHS+KD+P+ P G L I +REDPRDAF+SN+Y SL LP ++VGT
Sbjct: 68 VALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGT 127
Query: 61 NSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
+SLRR+ + P LII+SLRGN+ TRL+KLD GEY AIILA AGLKRL L+ RIR
Sbjct: 128 SSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAAL 187
Query: 121 SPNQILPAPGQGAIAIEI-LDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISL 179
P LPA GQGA+ IE LD+ + E+L LNH+ + V AERA++ G C++ +
Sbjct: 188 PPEISLPAVGQGAVGIECRLDDSRT-RELLAALNHHETALRVTAERAMNTRLEGGCQVPI 246
Query: 180 AAFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
++A + EI LRA++ P+G +II E G E +G+ AE L GA EI+
Sbjct: 247 GSYA---ELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREIL 303
>TIGR_CMR|BA_4696 [details] [associations]
symbol:BA_4696 "porphobilinogen deaminase" species:198094
"Bacillus anthracis str. Ames" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006782
eggNOG:COG0181 KO:K01749 GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 RefSeq:NP_846909.1 RefSeq:YP_021344.1
RefSeq:YP_030608.1 ProteinModelPortal:Q81LC7 IntAct:Q81LC7
DNASU:1083703 EnsemblBacteria:EBBACT00000008102
EnsemblBacteria:EBBACT00000015299 EnsemblBacteria:EBBACT00000024052
GeneID:1083703 GeneID:2816117 GeneID:2850412 KEGG:ban:BA_4696
KEGG:bar:GBAA_4696 KEGG:bat:BAS4361 HOGENOM:HOG000228587
OMA:CLAERAF ProtClustDB:PRK00072
BioCyc:BANT260799:GJAJ-4416-MONOMER
BioCyc:BANT261594:GJ7F-4564-MONOMER Uniprot:Q81LC7
Length = 309
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 100/244 (40%), Positives = 148/244 (60%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A++ + D+AVHS+KD+P LP G ++ KR DPRDAFIS S L + A++GT+
Sbjct: 67 ALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPKRVDPRDAFISKSGASYKELAEGAILGTS 126
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKR-IRMLF 120
SLRR + + P L +K +RGNIDTRL KL + +Y AIILA AGL+R+ I
Sbjct: 127 SLRRSAQLLAARPDLQVKWIRGNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEVITEHL 186
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
+PA GQGA+AIE ++ K+L+++L +N +E+TV AER G C++ +A
Sbjct: 187 DETLCVPAVGQGALAIECREDDKDLLQLLAHINDAVTEKTVAAERVFLHKLEGGCQVPIA 246
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 240
+A + N++ I L A++ + +G ++ V G D PE VGL AA+ L K+GA E+I
Sbjct: 247 GYATITE-NDA-IELTALVGSMDGSVLLKETVVGT-D-PEKVGLEAADRLIKQGAKELIL 302
Query: 241 SYEK 244
+ K
Sbjct: 303 AANK 306
>ZFIN|ZDB-GENE-040426-1375 [details] [associations]
symbol:hmbsa "hydroxymethylbilane synthase a"
species:7955 "Danio rerio" [GO:0018160 "peptidyl-pyrromethane
cofactor linkage" evidence=IEA] [GO:0033014 "tetrapyrrole
biosynthetic process" evidence=IEA] [GO:0004418
"hydroxymethylbilane synthase activity" evidence=IEA]
HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
ZFIN:ZDB-GENE-040426-1375 KO:K01749 GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOVERGEN:HBG000967 HSSP:P06983 GO:GO:0033014
EMBL:BC053268 IPI:IPI00487717 RefSeq:NP_957448.1 UniGene:Dr.79518
ProteinModelPortal:Q7T336 STRING:Q7T336 PRIDE:Q7T336 GeneID:394129
KEGG:dre:394129 CTD:394129 InParanoid:Q7T336 NextBio:20815080
ArrayExpress:Q7T336 Bgee:Q7T336 Uniprot:Q7T336
Length = 358
Score = 391 (142.7 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 81/188 (43%), Positives = 122/188 (64%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFI---SNDYISLSTLPKNAVV 58
A+ + + D+ VHSLKD+P +LP GF + AIL+RE+P DA + N ++L +LP+ +V+
Sbjct: 82 ALERNEVDIVVHSLKDLPTSLPPGFTIGAILERENPHDAVVLHPKNAGLTLDSLPEKSVI 141
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLD-KGEYAAIILAAAGLKRLNLQKRIR 117
GT+SLRR +K FP L +++RGN++TRL KLD K +YAAIILAAAGLKR+ + RI
Sbjct: 142 GTSSLRRAAQLKKRFPQLEFENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRMGWESRIS 201
Query: 118 MLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKI 177
+ P + A GQGA+A+E+ K+++EM+ L+H + +ERA + G C +
Sbjct: 202 QVLGPEDCMYAVGQGALAVEVRAQDKDILEMVSVLHHPDTVLRCISERAFLKQLEGGCSV 261
Query: 178 SLAAFAMV 185
+A V
Sbjct: 262 PVAVHTEV 269
Score = 44 (20.5 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 216 IDTPETVGLYAAELLKKKGAIEIIKSYEK 244
++ E +GL A +L KGA +I+ + K
Sbjct: 325 LEAAEKLGLDLANVLLNKGAKDILTTARK 353
>TIGR_CMR|CHY_1208 [details] [associations]
symbol:CHY_1208 "porphobilinogen deaminase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006779 "porphyrin-containing
compound biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006782 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
ProtClustDB:PRK00072 HSSP:P06983 RefSeq:YP_360051.1
ProteinModelPortal:Q3ACT3 STRING:Q3ACT3 GeneID:3727551
KEGG:chy:CHY_1208 PATRIC:21275552
BioCyc:CHYD246194:GJCN-1207-MONOMER Uniprot:Q3ACT3
Length = 311
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 90/243 (37%), Positives = 143/243 (58%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A++ D+AVHS+KD+P LP G + A +RE P D FIS LP+ A +GT+
Sbjct: 68 ALLNKTIDMAVHSMKDLPTVLPEGLKIGAFCEREYPGDVFISPKGFKFLELPQGARIGTS 127
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRR I + P L LRGN+ TR K+++ + IILA AG+KRL + +I + S
Sbjct: 128 SLRRIAQILAVRPDLQAIPLRGNLPTRFRKMEEMDLDGIILAYAGVKRLGYEDKITEMLS 187
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
+ LPA GQG+I +EI + + E+L P++H+ + + ++AERA + G C+I + A
Sbjct: 188 FDLCLPAVGQGSIGVEIRADDTFIEELLKPIDHFATNRAIRAERAFLKRLEGGCQIPIGA 247
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 241
++ V E+ ++L+ ++ + +G +I E G I+ PE VG+ AE L KGA +I++
Sbjct: 248 YSEVK---ENRLHLKGVVASLDGKLVIKGEKEGSIEEPEKVGISLAEELLTKGAQKILEE 304
Query: 242 YEK 244
+
Sbjct: 305 IRR 307
>UNIPROTKB|F1NKN8 [details] [associations]
symbol:HMBS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF GeneTree:ENSGT00390000009083
GO:GO:0033014 EMBL:AADN02042074 IPI:IPI00592719
Ensembl:ENSGALT00000000380 Uniprot:F1NKN8
Length = 349
Score = 376 (137.4 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 83/190 (43%), Positives = 118/190 (62%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFI---SNDYISLSTLPKNAVV 58
A+ + + DL VHSLKD+P +LP GF + AI KRE+P DA + N +LS LP+ +V+
Sbjct: 72 ALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSVLPEKSVI 131
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLD-KGEYAAIILAAAGLKRLNLQKRIR 117
GT+SLRR +K FP L + +RGN++TRL KLD K +++AIILAAAGLKR+ + RI
Sbjct: 132 GTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIG 191
Query: 118 MLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKI 177
L SP L A GQGA+A+E+ +E + M+ L + AERA + G C +
Sbjct: 192 QLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSALQDGETVLCCIAERAFMKRLEGGCSV 251
Query: 178 SLAAFAMVNN 187
+A M+ +
Sbjct: 252 PVAVNTMLKD 261
Score = 42 (19.8 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 208 ITAE-VNGPI-DTPETVGLYAAELLKKKGAIEII 239
ITA+ V G + E +G+ A LL KGA I+
Sbjct: 306 ITAKNVPGQAQEAAENLGIELASLLLSKGAKHIL 339
>TIGR_CMR|SPO_3649 [details] [associations]
symbol:SPO_3649 "porphobilinogen deaminase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=ISS] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251
UniPathway:UPA00668 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006782 GO:GO:0015995 HOGENOM:HOG000228588 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 OMA:CLAERAF ProtClustDB:PRK00072
RefSeq:YP_168844.1 ProteinModelPortal:Q5LMB4 GeneID:3195060
KEGG:sil:SPO3649 PATRIC:23380781 Uniprot:Q5LMB4
Length = 319
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 92/234 (39%), Positives = 135/234 (57%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A+++G D+AVHS KD+P+ P+G +L L RED RDAFIS + ++ LP AVVGT+
Sbjct: 81 AMLRGDIDIAVHSTKDMPVEQPAGLVLDTFLPREDVRDAFISPGHSAIRDLPLGAVVGTS 140
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
SLRRK + + P L + RGN+ TRL KL +G LA AG++RLN+ + S
Sbjct: 141 SLRRKAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVAECTFLAMAGIRRLNMAEVPATAIS 200
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
P+ +LPA QGAI IE + EML ++H + Q + AERA+ +GSC+ +A
Sbjct: 201 PDDMLPAIAQGAIGIERRMDDTRAAEMLTAIHHGETGQRLAAERALLAALDGSCETPIAG 260
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPI-DTPETVGLYAAELLKKKG 234
A ++ + + LR + P+G + IT + +G + D P A ELL + G
Sbjct: 261 LAELDG---TTLRLRGEVLRPDGSEAITLDRSGDVADGPALGTEMARELLAQAG 311
>MGI|MGI:96112 [details] [associations]
symbol:Hmbs "hydroxymethylbilane synthase" species:10090 "Mus
musculus" [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0004418 "hydroxymethylbilane synthase activity" evidence=ISO]
[GO:0004852 "uroporphyrinogen-III synthase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=IEA] [GO:0006783 "heme biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0030424 "axon" evidence=ISO] [GO:0031406
"carboxylic acid binding" evidence=ISO] [GO:0033014 "tetrapyrrole
biosynthetic process" evidence=ISO] [GO:0043176 "amine binding"
evidence=ISO] [GO:0050662 "coenzyme binding" evidence=ISO]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 MGI:MGI:96112
GO:GO:0005634 GO:GO:0005737 GO:GO:0071236 GO:GO:0071549
GO:GO:0042493 GO:GO:0032355 GO:GO:0010043 GO:GO:0050662
GO:GO:0031100 GO:GO:0030424 GO:GO:0031406 GO:GO:0001666
GO:GO:0009743 GO:GO:0000793 GO:GO:0043176 GO:GO:0043200
GO:GO:0071243 GO:GO:0051597 GO:GO:0071418 GO:GO:0032025
GO:GO:0006782 GO:GO:0071345 GO:GO:0071284 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
CTD:3145 GeneTree:ENSGT00390000009083 HOVERGEN:HBG000967
OrthoDB:EOG4QJRNF GO:GO:0004852 GO:GO:0048708 GO:GO:0033273
EMBL:M28666 EMBL:M28663 EMBL:M28664 EMBL:M28665 EMBL:AK166734
EMBL:AK167702 IPI:IPI00133589 IPI:IPI00230382 PIR:A36513
RefSeq:NP_038579.2 UniGene:Mm.247676 ProteinModelPortal:P22907
SMR:P22907 STRING:P22907 PaxDb:P22907 PRIDE:P22907
Ensembl:ENSMUST00000077353 Ensembl:ENSMUST00000097558 GeneID:15288
KEGG:mmu:15288 InParanoid:Q3TIV0 NextBio:287927 Bgee:P22907
CleanEx:MM_HMBS Genevestigator:P22907 GermOnline:ENSMUSG00000032126
Uniprot:P22907
Length = 361
Score = 365 (133.5 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 86/243 (35%), Positives = 144/243 (59%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISND-YI--SLSTLPKNAVV 58
A+ K + DL VHSLKD+P LP GF + AI KRE+P DA + + +I +L TLP+ + V
Sbjct: 84 ALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLPEKSAV 143
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDK-GEYAAIILAAAGLKRLNLQKRIR 117
GT+SLRR ++ FP L KS+RGN++TRL KLD+ E++AI+LA AGL+R+ Q R+
Sbjct: 144 GTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGWQNRVG 203
Query: 118 MLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKI 177
+ P + + A GQGA+A+E+ +++++++ L+ + AERA R+ G C +
Sbjct: 204 QILHPEECMYAVGQGALAVEVRAKDQDILDLVSVLHDPETLLRCIAERAFLRHLEGGCSV 263
Query: 178 SLAAFAMVNNFNESEINLRAIITNPNG-----------LKIITAEVNGPIDTPETVGLYA 226
+A ++ + ++ L + + +G +++ + +GP D P+ VG+ A
Sbjct: 264 PVAVHTVMK---DGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLVGITA 320
Query: 227 AEL 229
+
Sbjct: 321 RNI 323
Score = 39 (18.8 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 220 ETVGLYAAELLKKKGAIEII 239
E +G+ A LL KGA I+
Sbjct: 332 ENLGISLASLLLNKGAKNIL 351
>RGD|2801 [details] [associations]
symbol:Hmbs "hydroxymethylbilane synthase" species:10116 "Rattus
norvegicus" [GO:0001666 "response to hypoxia" evidence=IEP]
[GO:0004418 "hydroxymethylbilane synthase activity"
evidence=ISO;IMP;IDA] [GO:0004852 "uroporphyrinogen-III synthase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006782 "protoporphyrinogen IX biosynthetic
process" evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEP] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0010038 "response to metal ion" evidence=IEP]
[GO:0010043 "response to zinc ion" evidence=IEP] [GO:0010288
"response to lead ion" evidence=IEP] [GO:0014070 "response to organic
cyclic compound" evidence=IEP] [GO:0018160 "peptidyl-pyrromethane
cofactor linkage" evidence=IEA] [GO:0030424 "axon" evidence=IDA]
[GO:0031100 "organ regeneration" evidence=IEP] [GO:0031406
"carboxylic acid binding" evidence=IPI] [GO:0031667 "response to
nutrient levels" evidence=IEP] [GO:0032025 "response to cobalt ion"
evidence=IEP] [GO:0032355 "response to estradiol stimulus"
evidence=IEP] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IMP;IDA] [GO:0033273 "response to vitamin" evidence=IEP]
[GO:0042493 "response to drug" evidence=IEP] [GO:0043176 "amine
binding" evidence=IPI] [GO:0043200 "response to amino acid stimulus"
evidence=IEP] [GO:0048708 "astrocyte differentiation" evidence=IEP]
[GO:0050662 "coenzyme binding" evidence=IPI] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0071236 "cellular response to
antibiotic" evidence=IEP] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IEP] [GO:0071284 "cellular
response to lead ion" evidence=IEP] [GO:0071345 "cellular response to
cytokine stimulus" evidence=IEP] [GO:0071418 "cellular response to
amine stimulus" evidence=IEP] [GO:0071549 "cellular response to
dexamethasone stimulus" evidence=IEP] [GO:0000793 "condensed
chromosome" evidence=IDA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251
RGD:2801 GO:GO:0005634 GO:GO:0005737 GO:GO:0071236 GO:GO:0071549
GO:GO:0042493 GO:GO:0032355 GO:GO:0010043 GO:GO:0050662 GO:GO:0031100
GO:GO:0030424 GO:GO:0031406 GO:GO:0001666 GO:GO:0009743 GO:GO:0043176
GO:GO:0043200 GO:GO:0071243 GO:GO:0051597 GO:GO:0071418 GO:GO:0032025
GO:GO:0006782 GO:GO:0071345 GO:GO:0071284 eggNOG:COG0181
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587
HOVERGEN:HBG000967 OrthoDB:EOG4QJRNF GO:GO:0004852 GO:GO:0048708
GO:GO:0033273 EMBL:X06827 EMBL:Y12006 IPI:IPI00194345 IPI:IPI00551682
PIR:JE0285 UniGene:Rn.11080 ProteinModelPortal:P19356 STRING:P19356
PRIDE:P19356 UCSC:RGD:2801 InParanoid:P19356 SABIO-RK:P19356
ArrayExpress:P19356 Genevestigator:P19356
GermOnline:ENSRNOG00000010390 GO:GO:0033014 Uniprot:P19356
Length = 361
Score = 364 (133.2 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 87/243 (35%), Positives = 144/243 (59%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISND-YI--SLSTLPKNAVV 58
A+ K + DL VHSLKD+P LP GF + AI KRE+P DA + + +I +L TLP+ + V
Sbjct: 84 ALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLPEKSAV 143
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKG-EYAAIILAAAGLKRLNLQKRIR 117
GT+SLRR ++ FP L KS+RGN++TRL KLD+ E++AIILA AGL+R+ Q R+
Sbjct: 144 GTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDEQLEFSAIILAVAGLQRMGWQNRVG 203
Query: 118 MLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKI 177
+ P + + A GQGA+A+E+ +++++++ L+ + AERA R+ G C +
Sbjct: 204 QILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSV 263
Query: 178 SLAAFAMVNNFNESEINLRAIITNPNG-----------LKIITAEVNGPIDTPETVGLYA 226
+A ++ + ++ L + + +G +++ + +GP D P+ VG+ A
Sbjct: 264 PVAVHTVMK---DGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLVGITA 320
Query: 227 AEL 229
+
Sbjct: 321 RNI 323
Score = 39 (18.8 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 220 ETVGLYAAELLKKKGAIEII 239
E +G+ A LL KGA I+
Sbjct: 332 ENLGISLASLLLNKGAKNIL 351
>UNIPROTKB|Q5M893 [details] [associations]
symbol:Hmbs "Hydroxymethylbilane synthase" species:10116
"Rattus norvegicus" [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor
linkage" evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic
process" evidence=IEA] HAMAP:MF_00260 InterPro:IPR000860
InterPro:IPR022417 InterPro:IPR022418 InterPro:IPR022419
Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438 PRINTS:PR00151
PROSITE:PS00533 RGD:2801 GO:GO:0006779 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF CTD:3145
GeneTree:ENSGT00390000009083 HOVERGEN:HBG000967 IPI:IPI00551682
UniGene:Rn.11080 EMBL:BC088162 RefSeq:NP_037300.2 STRING:Q5M893
Ensembl:ENSRNOT00000014127 GeneID:25709 KEGG:rno:25709
InParanoid:Q5M893 NextBio:607767 Genevestigator:Q5M893
Uniprot:Q5M893
Length = 361
Score = 364 (133.2 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 87/243 (35%), Positives = 144/243 (59%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISND-YI--SLSTLPKNAVV 58
A+ K + DL VHSLKD+P LP GF + AI KRE+P DA + + +I +L TLP+ + V
Sbjct: 84 ALEKNEVDLVVHSLKDVPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLPEKSAV 143
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDK-GEYAAIILAAAGLKRLNLQKRIR 117
GT+SLRR ++ FP L KS+RGN++TRL KLD+ E++AIILA AGL+R+ Q R+
Sbjct: 144 GTSSLRRVAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAVAGLQRMGWQNRVG 203
Query: 118 MLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKI 177
+ P + + A GQGA+A+E+ +++++++ L+ + AERA R+ G C +
Sbjct: 204 QILHPEECMYAVGQGALAVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSV 263
Query: 178 SLAAFAMVNNFNESEINLRAIITNPNG-----------LKIITAEVNGPIDTPETVGLYA 226
+A ++ + ++ L + + +G +++ + +GP D P+ VG+ A
Sbjct: 264 PVAVHTVMK---DGQLYLTGGVWSLDGSDSMQETMQATIQVPVQQEDGPEDDPQLVGITA 320
Query: 227 AEL 229
+
Sbjct: 321 RNI 323
Score = 39 (18.8 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 220 ETVGLYAAELLKKKGAIEII 239
E +G+ A LL KGA I+
Sbjct: 332 ENLGISLASLLLNKGAKNIL 351
>CGD|CAL0000854 [details] [associations]
symbol:HEM3 species:5476 "Candida albicans" [GO:0006783 "heme
biosynthetic process" evidence=ISS;IMP] [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS;IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 CGD:CAL0000854
GO:GO:0009405 GO:GO:0006783 GO:GO:0006782 EMBL:AACQ01000104
EMBL:AACQ01000105 eggNOG:COG0181 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 EMBL:AL033502 RefSeq:XP_714346.1
RefSeq:XP_714388.1 ProteinModelPortal:O94048 STRING:O94048
GeneID:3643940 GeneID:3643992 KEGG:cal:CaO19.1742
KEGG:cal:CaO19.9309 Uniprot:O94048
Length = 340
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 102/242 (42%), Positives = 137/242 (56%)
Query: 7 KADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFI---SNDYISLSTLPKNAVVGTNSL 63
K DL VHSLKD+P NLP F L I +REDPRDA + + Y SL LP A+VGT+S+
Sbjct: 87 KLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKSLKDLPAGAIVGTSSI 146
Query: 64 RRKV-LIKSFFPSLIIKSLRGNIDTRLNKLDK--GEYAAIILAAAGLKRLNLQKRIRMLF 120
RR LIK++ P L +S+RGNI TRLNKLD+ EY +ILA+AGL RL L RI
Sbjct: 147 RRSSQLIKNY-PHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAGLIRLGLGHRITSYL 205
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
+ + A GQGA+ IEI + +L + + AER++ R G C + L
Sbjct: 206 --DDMYYAVGQGALGIEIRKGDDNIKSILKKIEDPIATICCLAERSLMRYLEGGCSVPLG 263
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPI---DTPETVGLYAAELLKKKGAIE 237
+ N ++ E+ L+ II +P+G I EV I + E VG+ + LK KGA E
Sbjct: 264 VHSDYNE-SKQELTLKGIIVSPDGTVSIEDEVIKRITCDEDCEQVGIELGDKLKAKGAKE 322
Query: 238 II 239
I+
Sbjct: 323 IL 324
>UNIPROTKB|O94048 [details] [associations]
symbol:HEM3 "Porphobilinogen deaminase" species:237561
"Candida albicans SC5314" [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=ISS;IMP] [GO:0006783 "heme biosynthetic process"
evidence=ISS;IMP] [GO:0009405 "pathogenesis" evidence=IMP]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 CGD:CAL0000854
GO:GO:0009405 GO:GO:0006783 GO:GO:0006782 EMBL:AACQ01000104
EMBL:AACQ01000105 eggNOG:COG0181 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 EMBL:AL033502 RefSeq:XP_714346.1
RefSeq:XP_714388.1 ProteinModelPortal:O94048 STRING:O94048
GeneID:3643940 GeneID:3643992 KEGG:cal:CaO19.1742
KEGG:cal:CaO19.9309 Uniprot:O94048
Length = 340
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 102/242 (42%), Positives = 137/242 (56%)
Query: 7 KADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFI---SNDYISLSTLPKNAVVGTNSL 63
K DL VHSLKD+P NLP F L I +REDPRDA + + Y SL LP A+VGT+S+
Sbjct: 87 KLDLIVHSLKDMPTNLPEEFELGCIFQREDPRDAIVMKQGSSYKSLKDLPAGAIVGTSSI 146
Query: 64 RRKV-LIKSFFPSLIIKSLRGNIDTRLNKLDK--GEYAAIILAAAGLKRLNLQKRIRMLF 120
RR LIK++ P L +S+RGNI TRLNKLD+ EY +ILA+AGL RL L RI
Sbjct: 147 RRSSQLIKNY-PHLRFESVRGNIQTRLNKLDQPNNEYCCLILASAGLIRLGLGHRITSYL 205
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
+ + A GQGA+ IEI + +L + + AER++ R G C + L
Sbjct: 206 --DDMYYAVGQGALGIEIRKGDDNIKSILKKIEDPIATICCLAERSLMRYLEGGCSVPLG 263
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPI---DTPETVGLYAAELLKKKGAIE 237
+ N ++ E+ L+ II +P+G I EV I + E VG+ + LK KGA E
Sbjct: 264 VHSDYNE-SKQELTLKGIIVSPDGTVSIEDEVIKRITCDEDCEQVGIELGDKLKAKGAKE 322
Query: 238 II 239
I+
Sbjct: 323 IL 324
>TAIR|locus:2150758 [details] [associations]
symbol:HEMC "hydroxymethylbilane synthase" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0018160 "peptidyl-pyrromethane cofactor linkage" evidence=IEA]
[GO:0033014 "tetrapyrrole biosynthetic process" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0042742 "defense response to
bacterium" evidence=IEP;RCA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0006364
"rRNA processing" evidence=RCA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0009073 "aromatic amino
acid family biosynthetic process" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0015995 "chlorophyll biosynthetic
process" evidence=RCA;TAS] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IDA;IMP] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=TAS] InterPro:IPR000860
InterPro:IPR022417 InterPro:IPR022418 InterPro:IPR022419
Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438 PRINTS:PR00151
PROSITE:PS00533 UniPathway:UPA00251 UniPathway:UPA00668
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0048046
GO:GO:0042742 GO:GO:0009941 GO:GO:0006782 GO:GO:0015995
EMBL:AL392174 EMBL:X73839 EMBL:X73535 EMBL:AF419614 EMBL:AY070431
EMBL:AY123037 IPI:IPI00532138 PIR:S50762 RefSeq:NP_196445.1
UniGene:At.48996 UniGene:At.5343 ProteinModelPortal:Q43316
SMR:Q43316 STRING:Q43316 PaxDb:Q43316 PRIDE:Q43316 ProMEX:Q43316
EnsemblPlants:AT5G08280.1 GeneID:830724 KEGG:ath:AT5G08280
TAIR:At5g08280 eggNOG:COG0181 HOGENOM:HOG000228588
InParanoid:Q43316 KO:K01749 OMA:NGSCDTP PhylomeDB:Q43316
ProtClustDB:PLN02691 BioCyc:ARA:AT5G08280-MONOMER
BioCyc:MetaCyc:AT5G08280-MONOMER Genevestigator:Q43316
GermOnline:AT5G08280 GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 TIGRFAMs:TIGR00212 Uniprot:Q43316
Length = 382
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 92/237 (38%), Positives = 134/237 (56%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A+I G D+AVHS+KD+P LP IL L RED RDAFI +L+ LP +VVGT
Sbjct: 142 ALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPAGSVVGTA 201
Query: 62 SLRRKVLIKSFFPSLIIK-SLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLF 120
SLRRK I +P+L ++ + RGN+ TRL+KL G+ A +LA AGLKRL++ + + +
Sbjct: 202 SLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMTENVASIL 261
Query: 121 SPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLA 180
S +++LPA QGAI I + ++ L LNH + + ERA +GSC+ +A
Sbjct: 262 SLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSCRTPIA 321
Query: 181 AFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETV--GLYAA-ELLKKKG 234
+A + E R ++ +P+G K++ GP + V G A ELL + G
Sbjct: 322 GYASKDE--EGNCIFRGLVASPDGTKVLETSRKGPYVYEDMVKMGKDAGQELLSRAG 376
>UNIPROTKB|Q2KIN5 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9913 "Bos
taurus" [GO:0006782 "protoporphyrinogen IX biosynthetic process"
evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
UniPathway:UPA00251 GO:GO:0006782 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
EMBL:BC112573 IPI:IPI00690248 RefSeq:NP_001039672.1
UniGene:Bt.21218 ProteinModelPortal:Q2KIN5 STRING:Q2KIN5
Ensembl:ENSBTAT00000007052 GeneID:515614 KEGG:bta:515614 CTD:3145
GeneTree:ENSGT00390000009083 HOVERGEN:HBG000967 InParanoid:Q2KIN5
OrthoDB:EOG4QJRNF NextBio:20871921 Uniprot:Q2KIN5
Length = 361
Score = 360 (131.8 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 86/243 (35%), Positives = 142/243 (58%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISND-YI--SLSTLPKNAVV 58
A+ + + DL VHSLKD+P LP GF + A+ KRE P DA + + ++ +L TLP+ +VV
Sbjct: 84 ALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTLETLPEKSVV 143
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDK-GEYAAIILAAAGLKRLNLQKRIR 117
GT+SLRR ++ FP L KS+RGN++TRL KLD+ E++AIILA AGL+R+ Q R+
Sbjct: 144 GTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILATAGLQRMGWQNRVG 203
Query: 118 MLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKI 177
+ P + + A GQGA+ +E+ +++++++ L+ + AER+ R+ G C +
Sbjct: 204 QILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERSFLRHLEGGCSV 263
Query: 178 SLAAFAMVNNFNESEINLRAIITNPNGLKII------TAEV-----NGPIDTPETVGLYA 226
+A + + ++ L + + NG + + T V +GP D P+ VG+ A
Sbjct: 264 PVAVHTAIK---DGQLYLTGGVWSLNGAETMQDTMQTTIHVPVQHEDGPEDDPQLVGITA 320
Query: 227 AEL 229
+
Sbjct: 321 RNI 323
Score = 38 (18.4 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 220 ETVGLYAAELLKKKGAIEII 239
E +G+ A LL KGA I+
Sbjct: 332 ENLGISLATLLLNKGAKNIL 351
>DICTYBASE|DDB_G0284697 [details] [associations]
symbol:hemC "porphobilinogen deaminase" species:44689
"Dictyostelium discoideum" [GO:0033014 "tetrapyrrole biosynthetic
process" evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor
linkage" evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=IEA;ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006783 "heme biosynthetic process"
evidence=IEA;ISS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0006779 "porphyrin-containing compound biosynthetic process"
evidence=IEA] [GO:0006782 "protoporphyrinogen IX biosynthetic
process" evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
UniPathway:UPA00251 dictyBase:DDB_G0284697
GenomeReviews:CM000153_GR GO:GO:0006783 GO:GO:0006782
EMBL:AAFI02000070 eggNOG:COG0181 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HSSP:P06983 RefSeq:XP_638482.1
ProteinModelPortal:Q54P93 STRING:Q54P93 EnsemblProtists:DDB0231417
GeneID:8624733 KEGG:ddi:DDB_G0284697 OMA:QPLRGNV
ProtClustDB:CLSZ2430242 Uniprot:Q54P93
Length = 325
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 93/252 (36%), Positives = 140/252 (55%)
Query: 3 IIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISN-----DYISLSTLPKNAV 57
++ G DLAVHSLKDIP LP G L AI KR + DAFI+N LS LP+ A+
Sbjct: 74 MLNGTIDLAVHSLKDIPTKLPDGLKLGAITKRYNTSDAFIANAKKHGKNCKLSELPQGAM 133
Query: 58 VGTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKL--DKGEYAAIILAAAGLKRLNLQKR 115
+G++SLRR +K +P L K +RGN++TR KL D Y +ILA AGL+R+ L
Sbjct: 134 IGSSSLRRVAQLKKAYPHLQFKDIRGNLNTRFKKLEDDSNGYDGMILAVAGLERMELTDH 193
Query: 116 IRMLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSC 175
I + + L A GQG++ IE D + +L PL H S +AER++ R+ G C
Sbjct: 194 ISEIIPDSISLYAVGQGSLGIECKDGDDFIQSILNPLIHRESMYCCEAERSMLRDLEGGC 253
Query: 176 KISLAAFAMVNNFNESE--INLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKK 233
+ + ++N ++ + + + AI+ N +G K I +++ GP +G A+ L K
Sbjct: 254 HVPIGVVTKLHNQSQPDETLEINAIVLNLDGSKYIESKIIGPSIQYYQLGKSIAQDLINK 313
Query: 234 GAIEIIKSYEKK 245
G+ +I+ + KK
Sbjct: 314 GSKDILSEFIKK 325
>UNIPROTKB|E2RTD6 [details] [associations]
symbol:HMBS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF GeneTree:ENSGT00390000009083
GO:GO:0033014 EMBL:AAEX03003441 Ensembl:ENSCAFT00000019616
Uniprot:E2RTD6
Length = 362
Score = 357 (130.7 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 90/244 (36%), Positives = 145/244 (59%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISND-YI--SLSTLP-KNAV 57
A+ K + DL VHSLKD+P LP GF + AI KRE+P DA + + ++ +L TLP K++V
Sbjct: 84 ALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLETLPEKSSV 143
Query: 58 VGTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDK-GEYAAIILAAAGLKRLNLQKRI 116
VGT+SLRR ++ FP L +S+RGN++TRL KLD+ E++AIILAAAGL+R+ Q R+
Sbjct: 144 VGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGWQHRV 203
Query: 117 RMLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCK 176
+ P + + A GQGA+ +E+ +++++++ L+ + AERA R+ G C
Sbjct: 204 GQILHPEECMYAVGQGALGVEVRAKDQDMLDLVGVLHDPETLLRCIAERAFLRHLEGGCS 263
Query: 177 ISLAAFAMVNNFNESEINLRAIITNPNGLKI----------ITAE-VNGPIDTPETVGLY 225
+ +A + + ++ L + + +G ITA+ +GP D P+ VG+
Sbjct: 264 VPVAVHTAMK---DGQLYLTGGVWSLDGSDSMQETMQATIHITAQHEDGPEDDPQLVGIT 320
Query: 226 AAEL 229
A +
Sbjct: 321 ARNI 324
Score = 39 (18.8 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 220 ETVGLYAAELLKKKGAIEII 239
E +G+ A LL KGA I+
Sbjct: 333 ENLGISLASLLLNKGAKNIL 352
>ZFIN|ZDB-GENE-050522-491 [details] [associations]
symbol:hmbsb "hydroxymethylbilane synthase, b"
species:7955 "Danio rerio" [GO:0033014 "tetrapyrrole biosynthetic
process" evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor
linkage" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 InterPro:IPR009081
ZFIN:ZDB-GENE-050522-491 PROSITE:PS50075 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 HOVERGEN:HBG000967
OrthoDB:EOG4QJRNF GO:GO:0033014 EMBL:BC095373 IPI:IPI00833720
RefSeq:NP_001019559.1 UniGene:Dr.78873 ProteinModelPortal:Q503D2
STRING:Q503D2 GeneID:338290 KEGG:dre:338290 CTD:338290
NextBio:20812617 Uniprot:Q503D2
Length = 360
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 84/207 (40%), Positives = 127/207 (61%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFI---SNDYISLSTLPKNAVV 58
A+ K + DL VHSLKD+P LP+GF + A+LKRE+P DA + N L +L +V+
Sbjct: 81 ALEKNEVDLVVHSLKDLPTVLPAGFTIGAVLKRENPHDAVVLHPKNKGKRLDSLSNKSVI 140
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKG-EYAAIILAAAGLKRLNLQKRIR 117
GT+SLRR +K FP L K +RGN++TRL KLD+ +++AIILAAAGLKR+ + RI
Sbjct: 141 GTSSLRRAAQLKKRFPHLEFKDIRGNLNTRLKKLDENNDFSAIILAAAGLKRMGWENRIS 200
Query: 118 MLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKI 177
+ P + A GQGA+A+E+ +++EM+ LN + + AERA ++ G C +
Sbjct: 201 QILGPEDCMYAVGQGALAVEVRARDLDILEMVSVLNDSDTALSCIAERAFLKHLEGGCSV 260
Query: 178 SLAAFAMVNNFNESEINLRAIITNPNG 204
+A + V N S++ L + + +G
Sbjct: 261 PVAVHSEVKN---SQLYLTGAVYSLDG 284
>UNIPROTKB|P08397 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0006782 "protoporphyrinogen IX biosynthetic
process" evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=IDA] [GO:0006783 "heme biosynthetic process"
evidence=IC;TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006778
"porphyrin-containing compound metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
UniPathway:UPA00251 GO:GO:0005829 GO:GO:0005634 EMBL:CH471065
GO:GO:0044281 GO:GO:0071236 GO:GO:0071549 GO:GO:0042493
GO:GO:0032355 GO:GO:0010043 GO:GO:0050662 GO:GO:0031100
GO:GO:0030424 GO:GO:0031406 GO:GO:0001666 GO:GO:0009743
GO:GO:0006783 GO:GO:0000793 GO:GO:0043176 GO:GO:0043200
GO:GO:0071243 GO:GO:0051597 GO:GO:0071418 GO:GO:0032025
GO:GO:0006782 GO:GO:0071345 GO:GO:0071284 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
CTD:3145 HOVERGEN:HBG000967 OrthoDB:EOG4QJRNF EMBL:X04217
EMBL:X04808 EMBL:M95623 EMBL:AK290275 EMBL:BC000520 EMBL:BC008149
EMBL:BC019323 EMBL:X68018 EMBL:S60381 IPI:IPI00028160
IPI:IPI00219877 PIR:A45012 RefSeq:NP_000181.2 RefSeq:NP_001019553.1
UniGene:Hs.82609 PDB:3ECR PDB:3EQ1 PDBsum:3ECR PDBsum:3EQ1
ProteinModelPortal:P08397 SMR:P08397 STRING:P08397
PhosphoSite:P08397 DMDM:1170217 PaxDb:P08397 PRIDE:P08397
DNASU:3145 Ensembl:ENST00000278715 Ensembl:ENST00000392841
Ensembl:ENST00000442944 Ensembl:ENST00000537841
Ensembl:ENST00000570821 Ensembl:ENST00000571563
Ensembl:ENST00000574152 Ensembl:ENST00000575587 GeneID:3145
KEGG:hsa:3145 UCSC:uc001puz.1 GeneCards:GC11P118955 HGNC:HGNC:4982
HPA:HPA006114 MIM:176000 MIM:609806 neXtProt:NX_P08397
Orphanet:79276 PharmGKB:PA29317 InParanoid:P08397 PhylomeDB:P08397
BRENDA:2.5.1.61 EvolutionaryTrace:P08397 GenomeRNAi:3145
NextBio:12464 ArrayExpress:P08397 Bgee:P08397 CleanEx:HS_HMBS
Genevestigator:P08397 GermOnline:ENSG00000149397 GO:GO:0004852
GO:GO:0048708 GO:GO:0033273 Uniprot:P08397
Length = 361
Score = 354 (129.7 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 87/243 (35%), Positives = 141/243 (58%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISND-YI--SLSTLPKNAVV 58
A+ K + DL VHSLKD+P LP GF + AI KRE+P DA + + ++ +L TLP+ +VV
Sbjct: 84 ALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVV 143
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKG-EYAAIILAAAGLKRLNLQKRIR 117
GT+SLRR ++ FP L +S+RGN++TRL KLD+ E++AIILA AGL+R+ R+
Sbjct: 144 GTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVG 203
Query: 118 MLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKI 177
+ P + + A GQGA+ +E+ +++++++ L+ + AERA R+ G C +
Sbjct: 204 QILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSV 263
Query: 178 SLAAFAMVNNFNESEINLRAIITNPNGLKII------TAEV-----NGPIDTPETVGLYA 226
+A + + ++ L + + +G I T V +GP D P+ VG+ A
Sbjct: 264 PVAVHTAMK---DGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLVGITA 320
Query: 227 AEL 229
+
Sbjct: 321 RNI 323
Score = 41 (19.5 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 214 GPIDTPETVGLYAAELLKKKGAIEII 239
GP + +G+ A LL KGA I+
Sbjct: 326 GPQLAAQNLGISLANLLLSKGAKNIL 351
>TIGR_CMR|CJE_0649 [details] [associations]
symbol:CJE_0649 "porphobilinogen deaminase" species:195099
"Campylobacter jejuni RM1221" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=ISS] [GO:0006779 "porphyrin-containing
compound biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0006782 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
ProtClustDB:PRK00072 RefSeq:YP_178664.1 HSSP:P06983
ProteinModelPortal:Q5HVM1 STRING:Q5HVM1 GeneID:3232028
KEGG:cjr:CJE0649 PATRIC:20043018 BioCyc:CJEJ195099:GJC0-664-MONOMER
Uniprot:Q5HVM1
Length = 307
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 90/244 (36%), Positives = 142/244 (58%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
++++ +A LAVHSLKD+P P G +L A+ KRE DA +S +Y +LPK A +GT
Sbjct: 65 SMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKIGTT 124
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRML-- 119
SLRRK+ + P L I SLRGN+++R+ KL ++ AIILA AG+KRLNL K++ +
Sbjct: 125 SLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNFVYE 184
Query: 120 FSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISL 179
FS ++++PA QGA+ IE +++ K ++E+L LN + ER G C++ +
Sbjct: 185 FSKDELIPAASQGALGIESINDEK-ILELLKCLNDENALIETSIEREFIATLEGGCQVPI 243
Query: 180 AAFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 239
A + EI +RA++ P+G +I+ + + + G A+ KGA E++
Sbjct: 244 GINAELLG---DEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAKELL 300
Query: 240 KSYE 243
K E
Sbjct: 301 KKAE 304
>TIGR_CMR|ECH_0701 [details] [associations]
symbol:ECH_0701 "porphobilinogen deaminase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006779 "porphyrin-containing
compound biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006782 eggNOG:COG0181 KO:K01749
OMA:NGSCDTP GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 TIGRFAMs:TIGR00212
HOGENOM:HOG000228587 ProtClustDB:PRK00072 RefSeq:YP_507506.1
ProteinModelPortal:Q2GGC7 STRING:Q2GGC7 GeneID:3927748
KEGG:ech:ECH_0701 PATRIC:20576850
BioCyc:ECHA205920:GJNR-703-MONOMER Uniprot:Q2GGC7
Length = 298
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 84/204 (41%), Positives = 122/204 (59%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A++ GK DLAVHS+KDIP G I+ +LKR P D FIS+ + + +LP NA +GT+
Sbjct: 66 ALLMGKVDLAVHSVKDIPAFYCEGLIIPCVLKRNSPYDVFISSKHKDIKSLPLNATIGTS 125
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
S+RRKV + P L + +RGNIDTR+ K + GE+ I+LA AGL R+N I+ + S
Sbjct: 126 SVRRKVQLNYLRPDLQVVPVRGNIDTRILKANVGEFDGIVLAEAGLIRINRCDVIKEILS 185
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
P +L A GQGAI I+ + ++ + LN + S V AER+ + NGSC LAA
Sbjct: 186 PKIMLSAVGQGAIGIQCRVDDHSIINKIKVLNCHQSYVCVMAERSFLKTINGSCDTPLAA 245
Query: 182 FAMVNNFNESEINLRAIITNPNGL 205
A N N++ I++ ++ N +
Sbjct: 246 LAQYVN-NDT-IHMSCMLANEKNM 267
>POMBASE|SPAC24B11.13 [details] [associations]
symbol:hem3 "hydroxymethylbilane synthase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS;IDA]
[GO:0006783 "heme biosynthetic process" evidence=ISS] [GO:0018160
"peptidyl-pyrromethane cofactor linkage" evidence=IEA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251
PomBase:SPAC24B11.13 GO:GO:0005634 GO:GO:0005737 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006783 GO:GO:0006782
eggNOG:COG0181 KO:K01749 OMA:NGSCDTP GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 EMBL:D89238 PIR:T39093
RefSeq:NP_001018179.1 ProteinModelPortal:Q09899 STRING:Q09899
PRIDE:Q09899 EnsemblFungi:SPAC24B11.13.1 GeneID:3361383
KEGG:spo:SPAC24B11.13 OrthoDB:EOG4KH644 NextBio:20811433
Uniprot:Q09899
Length = 336
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 85/252 (33%), Positives = 138/252 (54%)
Query: 3 IIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFI---SNDYISLSTLPKNAVVG 59
++ + + VHSLKD+P +P G ++ I KR P DA + + Y +++ LP +VVG
Sbjct: 74 LVTNQCRILVHSLKDLPSEMPDGMVIACIPKRSCPLDAIVFKAGSHYKTVADLPPGSVVG 133
Query: 60 TNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDK--GEYAAIILAAAGLKRLNLQKRIR 117
T+S+RR+ L+ FP L +RGN+ TRL KLD ++ ++LAAAGL RL L+ RI
Sbjct: 134 TSSIRRRALLARNFPHLRFVDIRGNVGTRLAKLDAPDSQFDCLVLAAAGLFRLGLKDRIA 193
Query: 118 MLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKI 177
+ + + A GQGA+A+E+ + KE++EML PL H + AERA+ + G C I
Sbjct: 194 QMLTAPFVYYAVGQGALAVEVRADDKEMIEMLKPLQHQETLYACLAERALMKRLQGGCAI 253
Query: 178 SLAAFAMVNNFNESE--INLRAIITNPNGLKIITAEVNGPIDTPET---VGLYAAELLKK 232
+ V + S I+L + + +GL+ + + E +G+ A L K
Sbjct: 254 PIGVQTDVLAISNSSYRISLLGTVLSADGLRAAFGNAEAVVSSEEEAEELGITVALALLK 313
Query: 233 KGAIEIIKSYEK 244
GA I++ +++
Sbjct: 314 NGAGPILEEHQR 325
>UNIPROTKB|F6Q2D2 [details] [associations]
symbol:HMBS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 eggNOG:COG0181 GO:GO:0004418 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 TIGRFAMs:TIGR00212
HOGENOM:HOG000228587 GeneTree:ENSGT00390000009083
HOVERGEN:HBG000967 OrthoDB:EOG4QJRNF GO:GO:0033014 EMBL:CU639481
Ensembl:ENSSSCT00000016474 OMA:GKGAFTK Uniprot:F6Q2D2
Length = 358
Score = 332 (121.9 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 85/243 (34%), Positives = 142/243 (58%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISND-YI--SLSTLPKNAVV 58
A+ + + DL VHSLKD+P LP GF + A+ KRE P DA + + ++ +L TLP+ +VV
Sbjct: 84 ALERNEVDLVVHSLKDLPTVLPPGFTIGAVCKRECPYDAVVFHPKFVGKTLETLPEKSVV 143
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDK-GEYAAIILAAAGLKRLNLQKRIR 117
GT+SLRR ++ FP L KS+RGN++TRL KLD+ E++AIILAAAGL+R+ Q R+
Sbjct: 144 GTSSLRRAAQLQRKFPHLEFKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGWQNRVG 203
Query: 118 MLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKI 177
+ P + + A GQGA+ +E+ ++ ++++ L+ ++ + R + R+ G C +
Sbjct: 204 QILHPEECMYAVGQGALGVEVRADQ-DILD-LVGVHDPETLLRCMLTRLL-RHLEGGCSV 260
Query: 178 SLAAFAMVNNFNESEINLRAIITNPNGLKII------TAEV-----NGPIDTPETVGLYA 226
+A + + ++ L + + NG + + T V +GP D P+ VG+ A
Sbjct: 261 PVAVHTAMK---DGQLYLTGGVWSLNGAESMQETMQATIHVPAQHEDGPEDDPQLVGITA 317
Query: 227 AEL 229
+
Sbjct: 318 RNI 320
Score = 38 (18.4 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 220 ETVGLYAAELLKKKGAIEII 239
E +G+ A LL KGA I+
Sbjct: 329 ENLGISLATLLLNKGAKNIL 348
>ASPGD|ASPL0000052688 [details] [associations]
symbol:hemC species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0006783 "heme biosynthetic process" evidence=IEA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 EMBL:BN001308 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF GO:GO:0033014
EnsemblFungi:CADANIAT00002626 Uniprot:C8VQK3
Length = 347
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 90/251 (35%), Positives = 141/251 (56%)
Query: 6 GKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYI---SLSTLPKNAVVGTNS 62
G DL VHSLKD+P LP+ L ++KRED RD + + SL+ +P +VVGT+S
Sbjct: 85 GSVDLIVHSLKDVPTLLPTSCTLGPMMKREDSRDGLVIKKGLPNMSLAEMPAGSVVGTSS 144
Query: 63 LRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGE--YAAIILAAAGLKRLNLQKRI-RML 119
+RR + +P L + +RGNI TRL KLD + Y +ILAAAGL RL L RI + L
Sbjct: 145 IRRTAQLARKYPHLKVMDVRGNIGTRLAKLDAEDSPYTCLILAAAGLLRLGLGDRIYQYL 204
Query: 120 FSPNQ-ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKIS 178
S N +L A GQGA+ IEI K + ++L + H + AER++ R G C
Sbjct: 205 DSRNAGMLYAVGQGALGIEIRKGDKAMEDILNTIGHKETTFACLAERSLLRTLEGGCSAP 264
Query: 179 LAAFA-MVNNFN-ESEINLRAIITNPNGLKIITAEVNGPIDTPETV---GLYAAELLKKK 233
L + + N S++ +R+++ + +G + E++G +D+P++ G+ A+ L +
Sbjct: 265 LGVETEWIQDTNGSSKLRMRSVVVSVDGSEHAEVEIDGTVDSPQSAEEFGVTVAKALVNE 324
Query: 234 GAIEIIKSYEK 244
GA +I+ ++
Sbjct: 325 GAGKILSEIQQ 335
>UNIPROTKB|P64336 [details] [associations]
symbol:hemC "Porphobilinogen deaminase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842573 GO:GO:0006782
eggNOG:COG0181 HOGENOM:HOG000228588 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF ProtClustDB:PRK00072 PIR:A70747
RefSeq:NP_215024.1 RefSeq:NP_334940.1 RefSeq:YP_006513843.1
ProteinModelPortal:P64336 SMR:P64336 PRIDE:P64336
EnsemblBacteria:EBMYCT00000000916 EnsemblBacteria:EBMYCT00000072383
GeneID:13318384 GeneID:887306 GeneID:924164 KEGG:mtc:MT0531
KEGG:mtu:Rv0510 KEGG:mtv:RVBD_0510 PATRIC:18122878
TubercuList:Rv0510 Uniprot:P64336
Length = 309
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/244 (36%), Positives = 130/244 (53%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A+ G D AVHS KD+P F + AI R DPRDA ++ D ++L LP ++VGT+
Sbjct: 61 AMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGSLVGTS 120
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
S RR +++ L I+ LRGN+DTRLNK+ G+ AI++A AGL RL +
Sbjct: 121 SPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDVTETLE 180
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
P Q+LPAP QGA+A+E L+ +L L+ + V AERA+ + C + A
Sbjct: 181 PVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCSAPVGA 240
Query: 182 FA-MVNNFNES-----EINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGA 235
A +V + +E E++LR + +G +I A G +GL A L + GA
Sbjct: 241 IAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAELFELGA 300
Query: 236 IEII 239
E++
Sbjct: 301 RELM 304
>SGD|S000002364 [details] [associations]
symbol:HEM3 "Porphobilinogen deaminase" species:4932
"Saccharomyces cerevisiae" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=IEA;IMP] [GO:0006783 "heme biosynthetic
process" evidence=IEA;IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=IEA] [GO:0006782 "protoporphyrinogen
IX biosynthetic process" evidence=IEA] [GO:0033014 "tetrapyrrole
biosynthetic process" evidence=IEA] [GO:0018160
"peptidyl-pyrromethane cofactor linkage" evidence=IEA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 SGD:S000002364
GO:GO:0005634 GO:GO:0005737 EMBL:BK006938 EMBL:X99000 GO:GO:0006783
GO:GO:0006782 eggNOG:COG0181 KO:K01749 GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOGENOM:HOG000228587
GeneTree:ENSGT00390000009083 OMA:QPLRGNV OrthoDB:EOG4KH644
EMBL:Z11745 EMBL:Z74253 EMBL:AY899249 PIR:S25071 RefSeq:NP_010076.1
ProteinModelPortal:P28789 SMR:P28789 STRING:P28789 PaxDb:P28789
PeptideAtlas:P28789 PRIDE:P28789 EnsemblFungi:YDL205C GeneID:851322
KEGG:sce:YDL205C CYGD:YDL205c NextBio:968366 Genevestigator:P28789
GermOnline:YDL205C Uniprot:P28789
Length = 327
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 84/232 (36%), Positives = 126/232 (54%)
Query: 7 KADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFIS---NDYISLSTLPKNAVVGTNSL 63
K DL VHSLKD+P LP GF L I KR DP D + + Y SL LP +VGT+S+
Sbjct: 78 KLDLIVHSLKDMPTLLPEGFELGGITKRVDPTDCLVMPFYSAYKSLDDLPDGGIVGTSSV 137
Query: 64 RRKVLIKSFFPSLIIKSLRGNIDTRLNKLD--KGEYAAIILAAAGLKRLNLQKRIRMLFS 121
RR +K +P L +S+RGNI TRL KLD K Y IILA+AGL R+ L+ RI F
Sbjct: 138 RRSAQLKRKYPHLKFESVRGNIQTRLQKLDDPKSPYQCIILASAGLMRMGLENRITQRFH 197
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
+ + A GQGA+ IEI ++M++L + + +ERA+ R G C + +
Sbjct: 198 SDTMYHAVGQGALGIEIRKGDTKMMKILDEICDLNATICCLSERALMRTLEGGCSVPIGV 257
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKK 233
+ N ++ L+AI+ + G + + E+ I+ + + ++L ++
Sbjct: 258 ESKYNE-ETKKLLLKAIVVDVEGTEAVEDEIEMLIENVKEDSMACGKILAER 308
>FB|FBgn0010786 [details] [associations]
symbol:l(3)02640 "lethal (3) 02640" species:7227 "Drosophila
melanogaster" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=ISS] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PRINTS:PR00151 PROSITE:PS00533 EMBL:AE014296 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 GeneTree:ENSGT00390000009083
HSSP:P06983 GO:GO:0033014 FlyBase:FBgn0010786 ChiTaRS:l(3)02640
EMBL:BT023907 EMBL:BT050461 RefSeq:NP_612103.1 UniGene:Dm.2323
SMR:Q9W0G4 STRING:Q9W0G4 EnsemblMetazoa:FBtr0072679 GeneID:46140
KEGG:dme:Dmel_CG9165 UCSC:CG9165-RA InParanoid:Q9W0G4 OMA:PPVICED
GenomeRNAi:46140 NextBio:838752 Uniprot:Q9W0G4
Length = 652
Score = 338 (124.0 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 76/203 (37%), Positives = 117/203 (57%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYI---SLSTLPKNAVV 58
A+ G D VHSLKD+P LP+G + A+L+RED RDA + + ++++LPK +V+
Sbjct: 71 ALRNGGVDFVVHSLKDLPTALPTGMAIGAVLEREDARDALVLRENFKGHTIASLPKGSVI 130
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGE--YAAIILAAAGLKRLNLQKRI 116
GT+SLRR I+ +P L + +RGN++TRL KLD + ++ IILA AGL R+ RI
Sbjct: 131 GTSSLRRTAQIRRMYPHLTVCDIRGNLNTRLAKLDAADSKFSGIILAQAGLVRMGWMSRI 190
Query: 117 RMLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCK 176
+ P +L A GQGA+A+E N +++ ML L + + AER+ + G C
Sbjct: 191 SQVLEPTDLLYAVGQGALAVECRANDDQVLAMLQKLMCLNTTCRILAERSFLKTLGGGCS 250
Query: 177 ISLAAFAMVN----NFNESEINL 195
+A ++ + N N E+ L
Sbjct: 251 APVAVWSNLKGEPLNGNSQEVGL 273
Score = 39 (18.8 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 214 GPIDTPETVGLYAAELLKKKGAIEIIK 240
G + +G AE L K+GA++++K
Sbjct: 613 GIYEKANQLGKTLAEDLIKRGALDVMK 639
>UNIPROTKB|F5H345 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HGNC:HGNC:4982 GO:GO:0033014 EMBL:AP003391
EMBL:AP003392 IPI:IPI01012145 ProteinModelPortal:F5H345 SMR:F5H345
Ensembl:ENST00000543090 ArrayExpress:F5H345 Bgee:F5H345
Uniprot:F5H345
Length = 330
Score = 313 (115.2 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 85/243 (34%), Positives = 136/243 (55%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISND-YI--SLSTLPKNAVV 58
A+ K + DL VHSLKD+P LP GF + AI KRE+P DA + + ++ +L TLP+ +VV
Sbjct: 66 ALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVV 125
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKG-EYAAIILAAAGLKRLNLQKRIR 117
GT+SLRR ++ FP L +S+RGN++TRL KLD+ E++AIILA AGL+R+ R+
Sbjct: 126 GTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRV- 184
Query: 118 MLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKI 177
GQGA+ +E+ +++++++ L+ + AERA R+ G C +
Sbjct: 185 ------------GQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSV 232
Query: 178 SLAAFAMVNNFNESEINLRAIITNPNGLKII------TAEV-----NGPIDTPETVGLYA 226
+A + + ++ L + + +G I T V +GP D P+ VG+ A
Sbjct: 233 PVAVHTAMK---DGQLYLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLVGITA 289
Query: 227 AEL 229
+
Sbjct: 290 RNI 292
Score = 41 (19.5 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 214 GPIDTPETVGLYAAELLKKKGAIEII 239
GP + +G+ A LL KGA I+
Sbjct: 295 GPQLAAQNLGISLANLLLSKGAKNIL 320
>TIGR_CMR|APH_0746 [details] [associations]
symbol:APH_0746 "porphobilinogen deaminase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251
UniPathway:UPA00668 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0006782 GO:GO:0015995 eggNOG:COG0181 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 ProtClustDB:PRK00072
RefSeq:YP_505325.1 ProteinModelPortal:Q2GJX6 STRING:Q2GJX6
GeneID:3930703 KEGG:aph:APH_0746 PATRIC:20950180 OMA:LEREDPH
BioCyc:APHA212042:GHPM-762-MONOMER Uniprot:Q2GJX6
Length = 304
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 81/232 (34%), Positives = 126/232 (54%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTN 61
A++ D+AVHS KD+P + IL R DAF+S+ Y S+++LP NA +GT+
Sbjct: 70 ALLDNIIDVAVHSAKDVPGIYSEDLDIPCILPRASALDAFLSSKYDSIASLPLNAKIGTS 129
Query: 62 SLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFS 121
S+RRKV + + P L I +RGN++TR++K+ GE I+LA AGL R++ I +
Sbjct: 130 SVRRKVQLLTMRPDLEIIPMRGNVETRISKMQMGECDGIVLAEAGLYRVSKDNLISEVLQ 189
Query: 122 PNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAA 181
P +L A GQGAI ++ + ++E+L LN + S TV AER+ R +GSC LAA
Sbjct: 190 PEVMLGAVGQGAICVQCRRYDRRILEILKKLNCHKSYTTVSAERSFMRAVDGSCNTPLAA 249
Query: 182 FAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKK 233
M + + ++ ++ + + T V E+ G LLK +
Sbjct: 250 --MAKYIDMDILTMKCMLADDARNMVFTERVFAE-QNAESAGYEMGTLLKNE 298
>UNIPROTKB|G4N2C1 [details] [associations]
symbol:MGG_04860 "Porphobilinogen deaminase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 EMBL:CM001233
KO:K01749 GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 TIGRFAMs:TIGR00212 GO:GO:0033014
RefSeq:XP_003712340.1 ProteinModelPortal:G4N2C1
EnsemblFungi:MGG_04860T0 GeneID:2675497 KEGG:mgr:MGG_04860
Uniprot:G4N2C1
Length = 340
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 88/252 (34%), Positives = 140/252 (55%)
Query: 6 GKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAF-ISNDYI-----SLSTLPKNAVVG 59
G+ D VH LKD+P LP L A+++REDPRD I ++ +++ LPK ++VG
Sbjct: 73 GEVDFIVHCLKDMPTTLPDNCELGAVMEREDPRDVVVIKPKHVQAGCKTIADLPKGSLVG 132
Query: 60 TNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDK--GEYAAIILAAAGLKRLNLQKRI- 116
T+S RR +K ++P L + RGNIDTRL KLD GE+ IILAAAGL R++ RI
Sbjct: 133 TSSPRRSSQLKRWYPELRFRDYRGNIDTRLRKLDAEDGEFDCIILAAAGLHRMDQHSRIA 192
Query: 117 RMLFSPNQ---ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKA---ERAVSRN 170
+ L S + +L A GQGA+ +E+ RK +E L + T+KA ER V R
Sbjct: 193 QYLDSTTEGGGVLHAVGQGALGLEV---RKGDIETLKVIECLVDMPTMKAGWAERTVMRT 249
Query: 171 FNGSCKISLAAFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPI---DTPETVGLYAA 227
G C + + ++ ++ + LRA + +G + + A+ + + + E +G +
Sbjct: 250 LEGGCSVPIGVETSWSDEGKT-LRLRATVVALDGSEAVDADASASVSNQEEAEALGKQVS 308
Query: 228 ELLKKKGAIEII 239
++L ++GA +I+
Sbjct: 309 QVLVERGAKKIL 320
>UNIPROTKB|G3V1P4 [details] [associations]
symbol:HMBS "Hydroxymethylbilane synthase, isoform CRA_c"
species:9606 "Homo sapiens" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=IEA] [GO:0033014 "tetrapyrrole
biosynthetic process" evidence=IEA] InterPro:IPR000860
InterPro:IPR022417 InterPro:IPR022418 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 EMBL:CH471065 KO:K01749
GO:GO:0004418 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 CTD:3145 UniGene:Hs.82609 GeneID:3145
KEGG:hsa:3145 HGNC:HGNC:4982 GO:GO:0033014 EMBL:AP003391
EMBL:AP003392 RefSeq:NP_001245138.1 ProteinModelPortal:G3V1P4
SMR:G3V1P4 PRIDE:G3V1P4 Ensembl:ENST00000542729 ArrayExpress:G3V1P4
Bgee:G3V1P4 Uniprot:G3V1P4
Length = 304
Score = 296 (109.3 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 64/142 (45%), Positives = 95/142 (66%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISND-YI--SLSTLPKNAVV 58
A+ K + DL VHSLKD+P LP GF + AI KRE+P DA + + ++ +L TLP+ +VV
Sbjct: 67 ALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVV 126
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKG-EYAAIILAAAGLKRLNLQKRIR 117
GT+SLRR ++ FP L +S+RGN++TRL KLD+ E++AIILA AGL+R+ R+
Sbjct: 127 GTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVG 186
Query: 118 MLFSPNQILPAPGQ-GAIAIEI 138
+ P + + A GQ G ++ +
Sbjct: 187 QILHPEECMYAVGQEGGCSVPV 208
Score = 41 (19.5 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 214 GPIDTPETVGLYAAELLKKKGAIEII 239
GP + +G+ A LL KGA I+
Sbjct: 269 GPQLAAQNLGISLANLLLSKGAKNIL 294
Score = 39 (18.8 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 213 NGPIDTPETVGLYAAEL 229
+GP D P+ VG+ A +
Sbjct: 250 DGPEDDPQLVGITARNI 266
>UNIPROTKB|G5EA58 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 EMBL:CH471065 KO:K01749 GO:GO:0004418
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 CTD:3145 UniGene:Hs.82609 GeneID:3145
KEGG:hsa:3145 HGNC:HGNC:4982 GO:GO:0033014 EMBL:AP003391
EMBL:AP003392 RefSeq:NP_001245137.1 ProteinModelPortal:G5EA58
SMR:G5EA58 PRIDE:G5EA58 Ensembl:ENST00000544387 ArrayExpress:G5EA58
Bgee:G5EA58 Uniprot:G5EA58
Length = 321
Score = 296 (109.3 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 64/142 (45%), Positives = 95/142 (66%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISND-YI--SLSTLPKNAVV 58
A+ K + DL VHSLKD+P LP GF + AI KRE+P DA + + ++ +L TLP+ +VV
Sbjct: 84 ALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVV 143
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKG-EYAAIILAAAGLKRLNLQKRIR 117
GT+SLRR ++ FP L +S+RGN++TRL KLD+ E++AIILA AGL+R+ R+
Sbjct: 144 GTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVG 203
Query: 118 MLFSPNQILPAPGQ-GAIAIEI 138
+ P + + A GQ G ++ +
Sbjct: 204 QILHPEECMYAVGQEGGCSVPV 225
Score = 41 (19.5 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 214 GPIDTPETVGLYAAELLKKKGAIEII 239
GP + +G+ A LL KGA I+
Sbjct: 286 GPQLAAQNLGISLANLLLSKGAKNIL 311
Score = 39 (18.8 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 213 NGPIDTPETVGLYAAEL 229
+GP D P+ VG+ A +
Sbjct: 267 DGPEDDPQLVGITARNI 283
>UNIPROTKB|F5GY90 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417 Pfam:PF01379
PRINTS:PR00151 GO:GO:0005634 GO:GO:0005737 GO:GO:0071236
GO:GO:0071549 GO:GO:0042493 GO:GO:0032355 GO:GO:0010043
GO:GO:0050662 GO:GO:0031100 GO:GO:0030424 GO:GO:0031406
GO:GO:0001666 GO:GO:0009743 GO:GO:0000793 GO:GO:0043176
GO:GO:0043200 GO:GO:0071243 GO:GO:0051597 GO:GO:0071418
GO:GO:0032025 GO:GO:0071345 GO:GO:0071284 GO:GO:0004418
PANTHER:PTHR11557 TIGRFAMs:TIGR00212 HGNC:HGNC:4982 GO:GO:0004852
GO:GO:0048708 GO:GO:0033273 GO:GO:0033014 EMBL:AP003391
EMBL:AP003392 IPI:IPI01010744 SMR:F5GY90 Ensembl:ENST00000535253
Ensembl:ENST00000539986 UCSC:uc009zao.2 Uniprot:F5GY90
Length = 187
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 59/119 (49%), Positives = 84/119 (70%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISND-YI--SLSTLPKNAVV 58
A+ K + DL VHSLKD+P LP GF + AI KRE+P DA + + ++ +L TLP+ +VV
Sbjct: 67 ALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVV 126
Query: 59 GTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKG-EYAAIILAAAGLKRLNLQKRI 116
GT+SLRR ++ FP L +S+RGN++TRL KLD+ E++AIILA AGL+R+ R+
Sbjct: 127 GTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRV 185
>TIGR_CMR|NSE_0385 [details] [associations]
symbol:NSE_0385 "putative porphobilinogen deaminase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006779 "porphyrin-containing
compound biosynthetic process" evidence=ISS] InterPro:IPR000860
InterPro:IPR022417 InterPro:IPR022418 InterPro:IPR022419
Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438 PRINTS:PR00151
PROSITE:PS00533 UniPathway:UPA00251 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0006782 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
RefSeq:YP_506274.1 ProteinModelPortal:Q2GE22 STRING:Q2GE22
GeneID:3931854 KEGG:nse:NSE_0385 PATRIC:22680835
ProtClustDB:CLSK2528160 BioCyc:NSEN222891:GHFU-410-MONOMER
Uniprot:Q2GE22
Length = 286
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 66/185 (35%), Positives = 100/185 (54%)
Query: 3 IIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNS 62
++ G+ D+AVHS+KD+P + +LKR P D F+S Y ++ +LP AV+GT +
Sbjct: 66 LLTGEIDIAVHSMKDVPAFYHDDLEVVPVLKRAIPNDVFVSFRYPNMLSLPNGAVIGTCA 125
Query: 63 LRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSP 122
RR V + F + LRGNI TR+ K + IILA L+RL L++ I +
Sbjct: 126 PRRVVQLNQRFRVI---PLRGNIATRIEKAKNLD--GIILAFCALERLGLRRMISEVIHE 180
Query: 123 NQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAF 182
N +LP QGA+ +E + L E+++ ++ + AERA NG CK +L A
Sbjct: 181 NVMLPGVAQGALCVEFRKKDRFLRELILNISDRETIICTAAERAFLEEINGDCKTALGAL 240
Query: 183 AMVNN 187
A+V N
Sbjct: 241 AIVKN 245
>UNIPROTKB|F5H226 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417 Pfam:PF01379
GO:GO:0004418 PANTHER:PTHR11557 HGNC:HGNC:4982 GO:GO:0033014
EMBL:AP003391 EMBL:AP003392 IPI:IPI01009265
ProteinModelPortal:F5H226 SMR:F5H226 Ensembl:ENST00000546302
ArrayExpress:F5H226 Bgee:F5H226 Uniprot:F5H226
Length = 191
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 45/103 (43%), Positives = 70/103 (67%)
Query: 33 KREDPRDAFISND-YI--SLSTLPKNAVVGTNSLRRKVLIKSFFPSLIIKSLRGNIDTRL 89
+RE+P DA + + ++ +L TLP+ +VVGT+SLRR ++ FP L +S+RGN++TRL
Sbjct: 89 ERENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRL 148
Query: 90 NKLDKG-EYAAIILAAAGLKRLNLQKRIRMLFSPNQILPAPGQ 131
KLD+ E++AIILA AGL+R+ R+ + P + + A GQ
Sbjct: 149 RKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQ 191
>GENEDB_PFALCIPARUM|PFL0480w [details] [associations]
symbol:PFL0480w "porphobilinogen deaminase,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=IDA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 Pfam:PF01379 Pfam:PF03900 PRINTS:PR00151
EMBL:AE014188 GO:GO:0020011 KO:K01749 GO:GO:0004418
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782 HSSP:P06983
ProtClustDB:CLSZ2430242 GO:GO:0033014 GenomeReviews:AE014188_GR
RefSeq:XP_001350505.1 ProteinModelPortal:Q8I5V3
EnsemblProtists:PFL0480w:mRNA GeneID:811149 KEGG:pfa:PFL0480w
EuPathDB:PlasmoDB:PF3D7_1209600 HOGENOM:HOG000281189 OMA:RENINTG
Uniprot:Q8I5V3
Length = 435
Score = 130 (50.8 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 25/62 (40%), Positives = 44/62 (70%)
Query: 58 VGTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIR 117
+GT+SLRR+ IK+ + ++ + ++RGNI+TR+ KL GE A+I+A G++RL + ++
Sbjct: 210 IGTSSLRRRSQIKNRYKNIYVNNIRGNINTRIEKLYNGEVDALIIAMCGIERLIKKANLK 269
Query: 118 ML 119
L
Sbjct: 270 HL 271
Score = 115 (45.5 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 3 IIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTL 52
+I G DL VHSLKD+P+ LP+ L LKR+ DAF+S Y S++ +
Sbjct: 131 LINGNVDLCVHSLKDVPILLPNNIELSCFLKRDTINDAFLSIKYKSINDM 180
>UNIPROTKB|Q8I5V3 [details] [associations]
symbol:PBGD "Porphobilinogen deaminase" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=IDA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
Pfam:PF01379 Pfam:PF03900 PRINTS:PR00151 EMBL:AE014188
GO:GO:0020011 KO:K01749 GO:GO:0004418 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 HSSP:P06983
ProtClustDB:CLSZ2430242 GO:GO:0033014 GenomeReviews:AE014188_GR
RefSeq:XP_001350505.1 ProteinModelPortal:Q8I5V3
EnsemblProtists:PFL0480w:mRNA GeneID:811149 KEGG:pfa:PFL0480w
EuPathDB:PlasmoDB:PF3D7_1209600 HOGENOM:HOG000281189 OMA:RENINTG
Uniprot:Q8I5V3
Length = 435
Score = 130 (50.8 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 25/62 (40%), Positives = 44/62 (70%)
Query: 58 VGTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIR 117
+GT+SLRR+ IK+ + ++ + ++RGNI+TR+ KL GE A+I+A G++RL + ++
Sbjct: 210 IGTSSLRRRSQIKNRYKNIYVNNIRGNINTRIEKLYNGEVDALIIAMCGIERLIKKANLK 269
Query: 118 ML 119
L
Sbjct: 270 HL 271
Score = 115 (45.5 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 3 IIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTL 52
+I G DL VHSLKD+P+ LP+ L LKR+ DAF+S Y S++ +
Sbjct: 131 LINGNVDLCVHSLKDVPILLPNNIELSCFLKRDTINDAFLSIKYKSINDM 180
>UNIPROTKB|F5H0P4 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417 Pfam:PF01379
PRINTS:PR00151 GO:GO:0004418 PANTHER:PTHR11557 HGNC:HGNC:4982
GO:GO:0033014 EMBL:AP003391 EMBL:AP003392 IPI:IPI01013863
ProteinModelPortal:F5H0P4 SMR:F5H0P4 Ensembl:ENST00000536813
ArrayExpress:F5H0P4 Bgee:F5H0P4 Uniprot:F5H0P4
Length = 119
Score = 117 (46.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 2 AIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFI 42
A+ K + DL VHSLKD+P LP GF + AI KRE+P DA +
Sbjct: 78 ALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVV 118
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 245 245 0.00099 113 3 11 22 0.43 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 549 (58 KB)
Total size of DFA: 141 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.07u 0.08s 21.15t Elapsed: 00:00:13
Total cpu time: 21.08u 0.08s 21.16t Elapsed: 00:00:15
Start: Thu Aug 15 14:34:22 2013 End: Thu Aug 15 14:34:37 2013