BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11425
(672 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7VVU9|HEM3_BORPE Porphobilinogen deaminase OS=Bordetella pertussis (strain Tohama I
/ ATCC BAA-589 / NCTC 13251) GN=hemC PE=3 SV=1
Length = 314
Score = 316 bits (810), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 204/293 (69%), Gaps = 3/293 (1%)
Query: 374 RLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKG 433
RLA+WQAE+VR + YP C VE+L +TT+GD+I ++ K+ KGLF KELE A++ G
Sbjct: 15 RLALWQAEHVRDLLRARYPACSVELLTLTTRGDQILDRTLSKVGGKGLFVKELETALLDG 74
Query: 434 KADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRK 493
+ADLAVHSLKD+P++L + F L +L+R DPRDAF+SNDY SL+ LP A VGT+SLRR+
Sbjct: 75 RADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGAAVGTSSLRRE 134
Query: 494 VLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQIL 553
I++ +P L++K LRGN+DTRL KLD G+YAAI+LAAAGL+RL L RIR L P+ L
Sbjct: 135 SQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARIRALLEPDDSL 194
Query: 554 PAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVN 613
PA GQGA+ IEIL R ++ ML PL + V AERAVSR GSC++ LAA+A ++
Sbjct: 195 PAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQVPLAAYARID 254
Query: 614 NFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 666
E+ LRA++ P+G +I+ AE GP D + +G AA L GA I+
Sbjct: 255 G---DELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304
>sp|Q7W785|HEM3_BORPA Porphobilinogen deaminase OS=Bordetella parapertussis (strain 12822
/ ATCC BAA-587 / NCTC 13253) GN=hemC PE=3 SV=1
Length = 314
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 203/293 (69%), Gaps = 3/293 (1%)
Query: 374 RLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKG 433
RLA+WQAE+VR + YP C VE+L +TT+GD+I ++ K+ KGLF KELE A++ G
Sbjct: 15 RLALWQAEHVRDLLRARYPACSVELLTLTTRGDQILDRTLSKVGGKGLFVKELETALLDG 74
Query: 434 KADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRK 493
+ADLAVHSLKD+P++L + F L +L+R DPRDAF+SNDY SL+ LP A VGT+SLRR+
Sbjct: 75 RADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGAAVGTSSLRRE 134
Query: 494 VLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQIL 553
I++ +P L++K LRGN+DTRL KLD G+YAAI+LAAAGL+RL L RIR L P L
Sbjct: 135 SQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARIRALLEPADSL 194
Query: 554 PAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVN 613
PA GQGA+ IEIL R ++ ML PL + V AERAVSR GSC++ LAA+A ++
Sbjct: 195 PAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQVPLAAYARID 254
Query: 614 NFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 666
E+ LRA++ P+G +I+ AE GP D + +G AA L GA I+
Sbjct: 255 G---DELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304
>sp|Q7WKM1|HEM3_BORBR Porphobilinogen deaminase OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=hemC PE=3 SV=1
Length = 314
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 203/293 (69%), Gaps = 3/293 (1%)
Query: 374 RLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKG 433
RLA+WQAE+VR + YP C VE+L +TT+GD+I ++ K+ KGLF KELE A++ G
Sbjct: 15 RLALWQAEHVRDLLRARYPACSVELLTLTTRGDQILDRTLSKVGGKGLFVKELETALLDG 74
Query: 434 KADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRK 493
+ADLAVHSLKD+P++L + F L +L+R DPRDAF+SNDY SL+ LP A VGT+SLRR+
Sbjct: 75 RADLAVHSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGAAVGTSSLRRE 134
Query: 494 VLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQIL 553
I++ +P L++K LRGN+DTRL KLD G+YAAI+LAAAGL+RL L RIR L P L
Sbjct: 135 SQIRARYPHLVVKPLRGNLDTRLGKLDNGDYAAIVLAAAGLERLGLAARIRALLEPADSL 194
Query: 554 PAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVN 613
PA GQGA+ IEIL R ++ ML PL + V AERAVSR GSC++ LAA+A ++
Sbjct: 195 PAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLGGSCQVPLAAYARID 254
Query: 614 NFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 666
E+ LRA++ P+G +I+ AE GP D + +G AA L GA I+
Sbjct: 255 G---DELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAIL 304
>sp|B2JEN9|HEM3_BURP8 Porphobilinogen deaminase OS=Burkholderia phymatum (strain DSM
17167 / STM815) GN=hemC PE=3 SV=1
Length = 327
Score = 312 bits (800), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 20 ESRLAMWQAEHVRCALHKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALA 79
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF+L I++REDPRDAF+SN Y SL+ LP +VVGT+SLR
Sbjct: 80 DGRADLAVHSLKDVPMELPEGFVLSTIMEREDPRDAFVSNQYDSLAALPAGSVVGTSSLR 139
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ +P L++K LRGN+DTRL KLD+G+YAAIILAAAGLKRL L +RIR L P
Sbjct: 140 REAMLRARYPELVVKPLRGNLDTRLGKLDRGDYAAIILAAAGLKRLGLGERIRSLLDPAD 199
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI R +L L PL+H + V+AER VSR GSC++ LAA+A
Sbjct: 200 SLPAAGQGALGIEIRAGRDDLAAWLAPLHHEHTAAAVEAERMVSRTLGGSCEVPLAAYA- 258
Query: 612 VNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPET---VGLYAAELLKKKGAIEIIKS 668
+++ ++LR I+ P+G ++++A+ + P T + +G A L+ +GA++I+++
Sbjct: 259 --TWHDGALHLRGIVATPDGERVLSAQASAPAATTDAALELGREVASQLEAQGALDIVRA 316
>sp|B2T1D1|HEM3_BURPP Porphobilinogen deaminase OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=hemC PE=3 SV=1
Length = 342
Score = 312 bits (800), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 217/300 (72%), Gaps = 6/300 (2%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 19 ESRLAMWQAEHVRCALHKLYPSCDVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALA 78
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP+GF L I++REDPRDA +SNDY SL+ LP AVVGT+SLR
Sbjct: 79 DGRADLAVHSLKDVPMELPAGFALSTIMEREDPRDALVSNDYDSLAALPAGAVVGTSSLR 138
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ +++ +P L ++ LRGN+DTRL+KLD+G+YAAIILAAAGLKRL L +RIR L P
Sbjct: 139 REAMLRMRYPHLEVRPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLGERIRALLDPED 198
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI +R +L L PL+H + V+AER VSR GSC++ LAA+A
Sbjct: 199 SLPAAGQGALGIEIRADRADLAAWLAPLHHDHTAAAVEAERMVSRALGGSCEVPLAAYA- 257
Query: 612 VNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPE---TVGLYAAELLKKKGAIEIIKS 668
+ + ++LR I+ P+G ++++A+ + P + E +G A L+++GA++I+++
Sbjct: 258 --TWRDGALHLRGIVATPDGQRVLSAQASAPAPSVERAVALGQEVASALEQQGAMDIVRA 315
>sp|Q7P207|HEM3_CHRVO Porphobilinogen deaminase OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=hemC PE=3 SV=2
Length = 309
Score = 311 bits (798), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 204/297 (68%), Gaps = 3/297 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+++ ++ LYP VEILG+TT+GD+I +K KI KGLF KELE A++
Sbjct: 10 ESRLAMWQAEHIQARLQALYPHLTVEILGMTTQGDQILDKTLSKIGGKGLFVKELEQALM 69
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L A+ +REDPRDAF+SN Y LS LP +VVGT+SLR
Sbjct: 70 DGRADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVGTSSLR 129
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ +++ FP L +K LRGN+ TRL KLD GE+ AIILAAAGLKRL L +RI+ +P++
Sbjct: 130 REAQLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQGELAPSE 189
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI +R +L +L PLNH + AERA+++ GSC++ L AFA
Sbjct: 190 SLPAAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSCQVPLGAFA- 248
Query: 612 VNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
+ + L ++ +P+G ++TA +GP D + +G A+ L GA +I +
Sbjct: 249 --TLADGTLTLGGLVAHPDGSVVLTASASGPADYADALGRAVAKKLIDAGARPLIAA 303
>sp|A9IKF3|HEM3_BORPD Porphobilinogen deaminase OS=Bordetella petrii (strain ATCC BAA-461
/ DSM 12804 / CCUG 43448) GN=hemC PE=3 SV=1
Length = 313
Score = 309 bits (791), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 145/269 (53%), Positives = 198/269 (73%), Gaps = 3/269 (1%)
Query: 374 RLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKG 433
RLA+WQAE+VR ++ LYP C VE+L +TT+GD+I ++ K+ KGLF KELE A++ G
Sbjct: 15 RLALWQAEHVRDRLRALYPACAVELLTLTTRGDQILDRTLSKVGGKGLFVKELETALLDG 74
Query: 434 KADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRK 493
+ADLAVHSLKD+P++L + F LCAIL+R DPRDAF+SN Y +L+ LP AVVGT+SLRR+
Sbjct: 75 RADLAVHSLKDVPVDLQAPFELCAILERADPRDAFVSNQYTTLADLPAGAVVGTSSLRRE 134
Query: 494 VLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQIL 553
I+ +P L +K LRGN+DTRL+KLD+G+YAAI+LAAAGL+RL + +RIR L P L
Sbjct: 135 SQIRQRYPHLSVKPLRGNLDTRLSKLDRGDYAAIVLAAAGLQRLGMGERIRSLLEPEDSL 194
Query: 554 PAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVN 613
PA GQGA+ IEI ++R +L E L PL + V AERAVSR GSC++ LAA+A
Sbjct: 195 PAAGQGALGIEIRNDRNDLREWLAPLACSRTTACVVAERAVSRALGGSCQVPLAAYA--- 251
Query: 614 NFNESEINLRAIITNPNGLKIITAEVNGP 642
N + + LRA++ +P+G ++I ++ GP
Sbjct: 252 ELNGNSLALRALVASPDGTRVIRSQHAGP 280
>sp|Q82WS2|HEM3_NITEU Porphobilinogen deaminase OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=hemC PE=3 SV=1
Length = 308
Score = 305 bits (781), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 151/297 (50%), Positives = 206/297 (69%), Gaps = 3/297 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E +LA+WQA ++R +++ELYP + ILG+TTKGD+I + KI KGLF KELE+A+
Sbjct: 13 ESQLALWQANFIRGRLLELYPQTDITILGMTTKGDQILDVSLSKIGGKGLFIKELELALE 72
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+AD+AVHS+KD+PM +PSGF L AI +REDPRDAF+SND+ SL LP +VVGT+SLR
Sbjct: 73 DGRADIAVHSMKDVPMIVPSGFTLAAITEREDPRDAFVSNDFSSLEELPAGSVVGTSSLR 132
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ +++ FP L ++ LRGN+ TRL KLD+GEY+AIILAAAGLKRL L RI ML P
Sbjct: 133 RESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLELGYRISMLLPPEL 192
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IE DN +++E + PL+H + V+AERA+SR GSC++ L FA
Sbjct: 193 SLPAVGQGALGIECRDNDPDMVEWMKPLHHAATACCVEAERAMSRMLGGSCQVPLGGFA- 251
Query: 612 VNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
E + LR + P+G ++I ++ G ++ E VG A+ LK GA EI+ +
Sbjct: 252 --EIFEDVLTLRGFVATPDGSRMIADKLCGKPESGEQVGQQLAQNLKAHGAEEILAA 306
>sp|Q9K0P6|HEM3_NEIMB Porphobilinogen deaminase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=hemC PE=3 SV=1
Length = 311
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 206/294 (70%), Gaps = 3/294 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQA++++ ++ LYP C+VEILG+TT+GD+I +K K+ KGLF KELE A+ G+
Sbjct: 15 LAMWQAKHIQGRLKALYPDCEVEILGMTTRGDQILDKTLSKVGGKGLFVKELEQALYDGR 74
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
ADLAVHS+KD+PM+LP GF L AI +R +P DAF+SN Y L +P+ AVVGT+SLRR+
Sbjct: 75 ADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYTRLEEMPEGAVVGTSSLRREA 134
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+++ +P L+IK LRGN+ TRL+KLD GEY AIILAAAGL+RL L RIRM+ S + LP
Sbjct: 135 QLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLKLDGRIRMILSESDSLP 194
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IEI +R++L E+L PLNH + V AERA++R GSC++ LAA+ N
Sbjct: 195 AAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARALGGSCQVPLAAYCTEEN 254
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
+ LR ++ +P+G ++ A+ P + + +G A+ L GA E+I +
Sbjct: 255 ---GLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDGARELIGA 305
>sp|C1D679|HEM3_LARHH Porphobilinogen deaminase OS=Laribacter hongkongensis (strain
HLHK9) GN=hemC PE=3 SV=1
Length = 308
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/297 (50%), Positives = 204/297 (68%), Gaps = 3/297 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E LA+WQAE++R ++ LYP +V ILGITT+GD+I +K KI KGLF KELE+A+
Sbjct: 10 ESPLAMWQAEHIRARLQALYPGLEVSILGITTQGDRILDKTLNKIGGKGLFVKELELAMQ 69
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
+G+ADLAVHS+KD+PM+LP GF L AI +REDPRDAF+S+ Y SLS LP AVVGT SLR
Sbjct: 70 EGQADLAVHSIKDVPMDLPEGFALAAICEREDPRDAFVSSRYASLSELPAGAVVGTASLR 129
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ I++ +P L++K LRGN+ TRL KLD+G+Y AIILAA+GLKR+ L +RIRM S
Sbjct: 130 RESQIRARYPHLLVKPLRGNLQTRLRKLDEGQYDAIILAASGLKRMGLAERIRMELSTAD 189
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI +R +LM +L PLNH + V AERA+ R SC+I + +A
Sbjct: 190 SLPAVGQGALGIEIRADRTDLMALLAPLNHPATYACVTAERAMGRALGASCQIPVGGYA- 248
Query: 612 VNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
+E + +R + P+G ++ AE P + + +G A+ L +GA ++I +
Sbjct: 249 --EQHEHMLVMRGFVATPDGTTLLHAEATAPAEYADALGRTIAKKLLDQGADDVIDA 303
>sp|Q9JVS4|HEM3_NEIMA Porphobilinogen deaminase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=hemC PE=3 SV=1
Length = 311
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 206/294 (70%), Gaps = 3/294 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQA++++ ++ LYP C+VEILG+TT+GD+I +K K+ KGLF KELE A+ G+
Sbjct: 15 LAMWQAKHIQGRLKALYPDCEVEILGMTTRGDQILDKTLSKVGGKGLFVKELEQALYDGR 74
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
ADLAVHS+KD+PM+LP GF L AI +R +P DAF+SN Y L +P+ AVVGT+SLRR+
Sbjct: 75 ADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEEMPEGAVVGTSSLRREA 134
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+++ +P L+IK LRGN+ TRL+KLD GEY AIILAAAGL+RL L RIRM+ S + LP
Sbjct: 135 QLRARYPHLLIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLKLDGRIRMILSESDSLP 194
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IEI +R++L E+L PLNH + V AERA++R GSC++ LAA+ N
Sbjct: 195 AAGQGALGIEIAAHREDLYEVLKPLNHGVTNACVTAERALARALGGSCQVPLAAYCTEEN 254
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
+ LR ++ +P+G ++ A+ P + + +G A+ L GA E+I +
Sbjct: 255 ---GLLTLRGLVGHPDGSVVLRADAQAPAEYADALGRAVAKKLADDGARELIGA 305
>sp|Q479S8|HEM3_DECAR Porphobilinogen deaminase OS=Dechloromonas aromatica (strain RCB)
GN=hemC PE=3 SV=1
Length = 311
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 208/296 (70%), Gaps = 3/296 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQA +VR ++ L P +V ILG+TTKGD+I ++ +I KGLF KELE+A+
Sbjct: 13 ESRLAMWQAVHVRDRLSSLNPGAEVVILGMTTKGDQILDRPLAEIGGKGLFIKELEVAMQ 72
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
+GKA LAVHS+KD+PM +P GF+L AI RE+PRDAF+SN Y L LP A+VGT+SLR
Sbjct: 73 EGKAHLAVHSMKDVPMVMPEGFVLAAISARENPRDAFVSNKYNGLDDLPAGAIVGTSSLR 132
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ +P L+IKSLRGN+DTRL KLD GEY AIILAAAGL RL ++ RI+ + + Q
Sbjct: 133 RESILRAKYPQLVIKSLRGNLDTRLKKLDAGEYDAIILAAAGLIRLGMENRIKSVLTAEQ 192
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPAPGQGA+ IE++D ++ +++ PLN + VKAERA SR GSC++ L +A+
Sbjct: 193 SLPAPGQGALGIELIDGAADMADVVAPLNDPETAHCVKAERAFSRALGGSCQVPLGGYAI 252
Query: 612 VNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 667
++N ++ LR + +G ++++AE+ G E +GL A L+ KGA I++
Sbjct: 253 IDN---GQLWLRGFVATADGQEVVSAELRGNPADDEALGLQLAAELRAKGADAILE 305
>sp|Q8XWW3|HEM3_RALSO Porphobilinogen deaminase OS=Ralstonia solanacearum (strain
GMI1000) GN=hemC PE=3 SV=1
Length = 334
Score = 297 bits (760), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 193/260 (74%), Gaps = 2/260 (0%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAEYVR + + YP C V ILG+TT+GD+I ++ K+ KGLF KELE+A+
Sbjct: 28 ESRLAMWQAEYVRAALQKYYPACDVSILGMTTRGDQILDRSLAKVGGKGLFVKELEVALA 87
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
+G+ADLAVHSLKD+PM LP GF+L AIL+REDPRDAF+SNDY L+ LP AVVGT+SLR
Sbjct: 88 EGRADLAVHSLKDVPMELPPGFVLSAILEREDPRDAFVSNDYADLAALPAGAVVGTSSLR 147
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ +++ FP L+I+ LRGN+DTRL+KLD+G+YAAIILAAAGLKRL L +RIR + +P
Sbjct: 148 REASLRARFPHLVIQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSERIRAVIAPET 207
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IE +R ++ L PL+H + V AERAVSR GSC++ LAAFA
Sbjct: 208 SLPAAGQGALGIESRVDRHDVQAWLAPLHHAPTALAVTAERAVSRQLGGSCQVPLAAFAQ 267
Query: 612 VNNFNESEINLRAIITNPNG 631
+ + LRA + +P+G
Sbjct: 268 WTDAG--ALRLRAFVASPDG 285
>sp|Q15Z15|HEM3_PSEA6 Porphobilinogen deaminase OS=Pseudoalteromonas atlantica (strain
T6c / ATCC BAA-1087) GN=hemC PE=3 SV=1
Length = 309
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/319 (46%), Positives = 220/319 (68%), Gaps = 12/319 (3%)
Query: 353 NDKVTVIALREISHGKIGVEIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKV 412
+D+V IA R+ + LA+WQAEYV+ K++E +P KVE++ ++T+GD+I +
Sbjct: 2 SDRVIRIATRKSA---------LAMWQAEYVQAKLLEAHPQLKVELVPMSTQGDRILDTP 52
Query: 413 PLKINEKGLFTKELEMAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISND 472
KI KGLF KELE+A+ +G+AD+AVHS+KD+P++ P+GF L I +RE+P DAF+SN
Sbjct: 53 LAKIGGKGLFIKELEVAMSEGRADIAVHSMKDVPVDFPAGFGLHCICERENPYDAFVSNT 112
Query: 473 YISLSTLPKNAVVGTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAA 532
Y S+ LP+ A+VGT+SLRR+ I+S P L I+ LRGN++TRL KLD G+Y AIILAAA
Sbjct: 113 YASIEELPQGAIVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDDGQYDAIILAAA 172
Query: 533 GLKRLNLQKRIRMLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAER 592
GL RL +Q RI+ P LPA GQGA+ IE ++ EL+E+L PLNH +E VKAER
Sbjct: 173 GLIRLEMQDRIKTYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHSDTESRVKAER 232
Query: 593 AVSRNFNGSCKISLAAFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLY 652
A++ NG C++ + ++A++N E+ LR ++ +P+G ++ AE G ++ ++G+
Sbjct: 233 AMNAKLNGGCQVPIGSYAVLNG---DELYLRGLVGSPDGSVLLQAEKRGNVNDALSIGVD 289
Query: 653 AAELLKKKGAIEIIKSYEK 671
AE L +KGA +I+++ K
Sbjct: 290 VAEQLLEKGAGDILQALYK 308
>sp|Q3SFT5|HEM3_THIDA Porphobilinogen deaminase OS=Thiobacillus denitrificans (strain
ATCC 25259) GN=hemC PE=3 SV=1
Length = 306
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/297 (48%), Positives = 195/297 (65%), Gaps = 3/297 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E LA+WQAE++R ++ EL+P CKV ILG+TT+GD+I + KI KGLF KELE+A+
Sbjct: 10 ESALAMWQAEHIRDRLRELHPECKVNILGMTTRGDQILDVTLSKIGGKGLFVKELEVALA 69
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHS+KD+PM LP GF L I +REDPRDAF+SN Y LS LP +VVGT+SLR
Sbjct: 70 AGEADLAVHSMKDVPMELPPGFELAVIGEREDPRDAFVSNRYARLSDLPPGSVVGTSSLR 129
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ +++ +P L +K LRGN+ TRL KLD+G++ AI+LAAAGLKRL L RI+ L S +
Sbjct: 130 REAQLRARYPHLTVKPLRGNVGTRLKKLDEGQFDAILLAAAGLKRLGLGARIKSLLSVEE 189
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
+PA GQGA+ IEI + ML PLN + V+AER VSR GSC++ L A A
Sbjct: 190 SIPAAGQGALGIEIRSGNTAVAAMLAPLNDPVTAACVRAERQVSRVLGGSCQVPLGAHA- 248
Query: 612 VNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
++ + + L + P+G + + G PE VG A+ L +GA ++ +
Sbjct: 249 --SYKDGRLLLEGFVAKPDGSRFLVDRAEGDASDPEAVGQALADKLLAQGARAVLDA 303
>sp|Q2T071|HEM3_BURTA Porphobilinogen deaminase OS=Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=hemC
PE=3 SV=1
Length = 329
Score = 288 bits (738), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 143/269 (53%), Positives = 192/269 (71%), Gaps = 3/269 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 20 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELESALA 79
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP+GF L A++ REDPRDAF+SNDY SL LP AVVGT+SLR
Sbjct: 80 DGRADLAVHSLKDVPMELPAGFALAAVMSREDPRDAFVSNDYASLDALPAGAVVGTSSLR 139
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ +P L ++ LRGN+DTRL KLD+G+YAAIILAAAGLKRL L RIR L
Sbjct: 140 REAMLRARYPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRALLDVED 199
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI R ++ L PL+ + + V+AERAVSR GSC++ LAA A+
Sbjct: 200 SLPAAGQGALGIEIAAGRADVAAWLAPLHDHATALAVEAERAVSRALGGSCEVPLAAHAV 259
Query: 612 VNNFNESEINLRAIITNPNGLKIITAEVN 640
+ E++L ++ +G +++ A
Sbjct: 260 ---WRGDELHLTGSVSTTDGARVLAARAQ 285
>sp|Q7MQC7|HEM3_VIBVY Porphobilinogen deaminase OS=Vibrio vulnificus (strain YJ016)
GN=hemC PE=3 SV=1
Length = 312
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 199/292 (68%), Gaps = 3/292 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQA YV+ + + +P +VE++ + TKGD I + K+ KGLF KELE+A+++G+
Sbjct: 16 LALWQAYYVKDALQKAHPGLEVELVTMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGR 75
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
ADLAVHS+KD+P++ P G L I +REDPRDAF+SN Y + LP+ AVVGT SLRR+
Sbjct: 76 ADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQGAVVGTCSLRRQC 135
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+K++ P L+IK LRGN+ TRL+KLD GEY AIILAAAGLKRL L++RIR P Q LP
Sbjct: 136 QLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEERIRSFIEPEQSLP 195
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IE N + ++++L PLNH + VK ERA++ G C++ + ++A++
Sbjct: 196 AVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGCQVPIGSYALLEG 255
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 666
EI LRA++ P+G +I+ E+ GP E +G+ A L +GA EI+
Sbjct: 256 ---DEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLGVQLANQLLDEGAREIL 304
>sp|Q8DD85|HEM3_VIBVU Porphobilinogen deaminase OS=Vibrio vulnificus (strain CMCP6)
GN=hemC PE=3 SV=1
Length = 312
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 199/292 (68%), Gaps = 3/292 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQA YV+ + + +P +VE++ + TKGD I + K+ KGLF KELE+A+++G+
Sbjct: 16 LALWQAYYVKDALQKAHPGLEVELVTMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGR 75
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
ADLAVHS+KD+P++ P G L I +REDPRDAF+SN Y + LP+ AVVGT SLRR+
Sbjct: 76 ADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQGAVVGTCSLRRQC 135
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+K++ P L+IK LRGN+ TRL+KLD GEY AIILAAAGLKRL L++RIR P Q LP
Sbjct: 136 QLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEERIRSFIEPEQSLP 195
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IE N + ++++L PLNH + VK ERA++ G C++ + ++A++
Sbjct: 196 AVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGCQVPIGSYALLEG 255
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 666
EI LRA++ P+G +I+ E+ GP E +G+ A L +GA EI+
Sbjct: 256 ---DEIWLRALVGEPDGSEIVRGEIRGPRAQAEQLGVQLANQLLDEGAREIL 304
>sp|B4E8C4|HEM3_BURCJ Porphobilinogen deaminase OS=Burkholderia cepacia (strain J2315 /
LMG 16656) GN=hemC PE=3 SV=1
Length = 334
Score = 288 bits (736), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/300 (50%), Positives = 209/300 (69%), Gaps = 6/300 (2%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 25 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALA 84
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L AI++REDPRDAF+SNDY SL LP AVVGT+SLR
Sbjct: 85 DGRADLAVHSLKDVPMALPDGFALAAIMEREDPRDAFVSNDYASLDALPAGAVVGTSSLR 144
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ +++S +P L + LRGN+DTRL KLD+G+YAAIILAAAGLKRL L+ RIR L
Sbjct: 145 REAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRALLDVEA 204
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
PA GQGA+ IEI +R ++ L PL+ + V+AER VSR GSC++ LAA A+
Sbjct: 205 SPPAAGQGALGIEIAAHRDDVAAWLAPLHDPRTALAVEAERMVSRALGGSCEVPLAAHAV 264
Query: 612 VNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPE---TVGLYAAELLKKKGAIEIIKS 668
+ E+ L ++ +G +++TAE G + T +G ++ L+ +GA++I+++
Sbjct: 265 ---WRAGELYLTGRVSTTDGKRVLTAEECGAVMTVADALALGRAVSDELEAQGALDIVQA 321
>sp|B1JWR0|HEM3_BURCC Porphobilinogen deaminase OS=Burkholderia cenocepacia (strain
MC0-3) GN=hemC PE=3 SV=1
Length = 334
Score = 287 bits (735), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/300 (50%), Positives = 209/300 (69%), Gaps = 6/300 (2%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 25 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELEAALA 84
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L AI++REDPRDAF+SNDY SL LP AVVGT+SLR
Sbjct: 85 DGRADLAVHSLKDVPMALPDGFSLAAIMEREDPRDAFVSNDYASLDALPAGAVVGTSSLR 144
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ +++S +P L + LRGN+DTRL KLD+G+YAAIILAAAGLKRL L+ RIR L
Sbjct: 145 REAMLRSRYPHLEVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRALLDVEA 204
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
PA GQGA+ IEI +R ++ L PL+ + V+AER VSR GSC++ LAA A+
Sbjct: 205 SPPAAGQGALGIEIAAHRDDVAAWLAPLHDPQTALAVEAERMVSRALGGSCEVPLAAHAV 264
Query: 612 VNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPE---TVGLYAAELLKKKGAIEIIKS 668
+ E+ L ++ +G +++TAE G + T +G ++ L+ +GA++I+++
Sbjct: 265 ---WRAGELYLTGRVSTTDGKRVLTAEECGAVVTVADALALGRAVSDELEAQGALDIVQA 321
>sp|Q0BCU9|HEM3_BURCM Porphobilinogen deaminase OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=hemC PE=3 SV=1
Length = 328
Score = 285 bits (730), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 151/300 (50%), Positives = 208/300 (69%), Gaps = 6/300 (2%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 20 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALA 79
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L AI++REDPRDAF+SNDY SL LP AVVGT+SLR
Sbjct: 80 DGRADLAVHSLKDVPMALPDGFALTAIMEREDPRDAFVSNDYASLDALPAGAVVGTSSLR 139
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ +P L + LRGN+DTRL KLD+G+YAAIILAAAGLKRL L+ RIR L
Sbjct: 140 REAMLRARYPHLDVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRTLIDVED 199
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
PA GQGA+ IEI +R ++ L PL+ + V+AER VSR GSC++ LAA A+
Sbjct: 200 SPPAAGQGALGIEIATHRTDVAAWLAPLHDPRTALAVEAERMVSRALGGSCEVPLAAHAV 259
Query: 612 VNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPE---TVGLYAAELLKKKGAIEIIKS 668
+ E+ L ++ +G +++TAE G + T +G ++ L+ +GA++I+ +
Sbjct: 260 ---WRAGELYLTGRVSTTDGQRVLTAEECGAVMTVADALALGRAVSDELEAQGALDIVNA 316
>sp|Q63W73|HEM3_BURPS Porphobilinogen deaminase OS=Burkholderia pseudomallei (strain
K96243) GN=hemC PE=3 SV=1
Length = 329
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 189/263 (71%), Gaps = 3/263 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 20 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELESALA 79
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L A++ REDPRDAF+SNDY SL LP AVVGT+SLR
Sbjct: 80 DGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVVGTSSLR 139
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ P L ++ LRGN+DTRL KLD+G+YAAIILAAAGLKRL L RIR L +
Sbjct: 140 REAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRALLDVDD 199
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI R ++ L PL+ + S V+AERAVSR GSC++ LAA A+
Sbjct: 200 SLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVPLAAHAV 259
Query: 612 VNNFNESEINLRAIITNPNGLKI 634
+ E++L ++ +G ++
Sbjct: 260 ---WRGGELHLTGSVSTTDGARV 279
>sp|Q3JUW3|HEM3_BURP1 Porphobilinogen deaminase OS=Burkholderia pseudomallei (strain
1710b) GN=hemC PE=3 SV=1
Length = 329
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 189/263 (71%), Gaps = 3/263 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 20 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELESALA 79
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L A++ REDPRDAF+SNDY SL LP AVVGT+SLR
Sbjct: 80 DGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVVGTSSLR 139
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ P L ++ LRGN+DTRL KLD+G+YAAIILAAAGLKRL L RIR L +
Sbjct: 140 REAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRALLDVDD 199
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI R ++ L PL+ + S V+AERAVSR GSC++ LAA A+
Sbjct: 200 SLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVPLAAHAV 259
Query: 612 VNNFNESEINLRAIITNPNGLKI 634
+ E++L ++ +G ++
Sbjct: 260 ---WRGGELHLTGSVSTTDGARV 279
>sp|A3NSN6|HEM3_BURP0 Porphobilinogen deaminase OS=Burkholderia pseudomallei (strain
1106a) GN=hemC PE=3 SV=1
Length = 329
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 189/263 (71%), Gaps = 3/263 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 20 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELESALA 79
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L A++ REDPRDAF+SNDY SL LP AVVGT+SLR
Sbjct: 80 DGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVVGTSSLR 139
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ P L ++ LRGN+DTRL KLD+G+YAAIILAAAGLKRL L RIR L +
Sbjct: 140 REAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRALLDVDD 199
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI R ++ L PL+ + S V+AERAVSR GSC++ LAA A+
Sbjct: 200 SLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVPLAAHAV 259
Query: 612 VNNFNESEINLRAIITNPNGLKI 634
+ E++L ++ +G ++
Sbjct: 260 ---WRGGELHLTGSVSTTDGARV 279
>sp|A1V5U0|HEM3_BURMS Porphobilinogen deaminase OS=Burkholderia mallei (strain SAVP1)
GN=hemC PE=3 SV=1
Length = 329
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 189/263 (71%), Gaps = 3/263 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 20 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELESALA 79
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L A++ REDPRDAF+SNDY SL LP AVVGT+SLR
Sbjct: 80 DGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVVGTSSLR 139
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ P L ++ LRGN+DTRL KLD+G+YAAIILAAAGLKRL L RIR L +
Sbjct: 140 REAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRALLDVDD 199
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI R ++ L PL+ + S V+AERAVSR GSC++ LAA A+
Sbjct: 200 SLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVPLAAHAV 259
Query: 612 VNNFNESEINLRAIITNPNGLKI 634
+ E++L ++ +G ++
Sbjct: 260 ---WRGGELHLTGSVSTTDGARV 279
>sp|Q62LC0|HEM3_BURMA Porphobilinogen deaminase OS=Burkholderia mallei (strain ATCC
23344) GN=hemC PE=3 SV=1
Length = 329
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 189/263 (71%), Gaps = 3/263 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 20 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELESALA 79
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L A++ REDPRDAF+SNDY SL LP AVVGT+SLR
Sbjct: 80 DGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVVGTSSLR 139
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ P L ++ LRGN+DTRL KLD+G+YAAIILAAAGLKRL L RIR L +
Sbjct: 140 REAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRALLDVDD 199
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI R ++ L PL+ + S V+AERAVSR GSC++ LAA A+
Sbjct: 200 SLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVPLAAHAV 259
Query: 612 VNNFNESEINLRAIITNPNGLKI 634
+ E++L ++ +G ++
Sbjct: 260 ---WRGGELHLTGSVSTTDGARV 279
>sp|A2SAH5|HEM3_BURM9 Porphobilinogen deaminase OS=Burkholderia mallei (strain NCTC
10229) GN=hemC PE=3 SV=1
Length = 329
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 189/263 (71%), Gaps = 3/263 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 20 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELESALA 79
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L A++ REDPRDAF+SNDY SL LP AVVGT+SLR
Sbjct: 80 DGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVVGTSSLR 139
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ P L ++ LRGN+DTRL KLD+G+YAAIILAAAGLKRL L RIR L +
Sbjct: 140 REAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRALLDVDD 199
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI R ++ L PL+ + S V+AERAVSR GSC++ LAA A+
Sbjct: 200 SLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVPLAAHAV 259
Query: 612 VNNFNESEINLRAIITNPNGLKI 634
+ E++L ++ +G ++
Sbjct: 260 ---WRGGELHLTGSVSTTDGARV 279
>sp|A3MLK5|HEM3_BURM7 Porphobilinogen deaminase OS=Burkholderia mallei (strain NCTC
10247) GN=hemC PE=3 SV=1
Length = 329
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 189/263 (71%), Gaps = 3/263 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 20 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELESALA 79
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L A++ REDPRDAF+SNDY SL LP AVVGT+SLR
Sbjct: 80 DGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVVGTSSLR 139
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ P L ++ LRGN+DTRL KLD+G+YAAIILAAAGLKRL L RIR L +
Sbjct: 140 REAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRALLDVDD 199
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI R ++ L PL+ + S V+AERAVSR GSC++ LAA A+
Sbjct: 200 SLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVPLAAHAV 259
Query: 612 VNNFNESEINLRAIITNPNGLKI 634
+ E++L ++ +G ++
Sbjct: 260 ---WRGGELHLTGSVSTTDGARV 279
>sp|Q9KVM1|HEM3_VIBCH Porphobilinogen deaminase OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=hemC PE=3 SV=2
Length = 311
Score = 285 bits (729), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 137/293 (46%), Positives = 195/293 (66%), Gaps = 3/293 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQA YV+ ++ +P +VE++ + T+GD I + K+ KGLF KELE+A+++G+
Sbjct: 15 LALWQANYVKDALMAAHPGLQVELVTMVTRGDVILDTPLAKVGGKGLFVKELEIAMLEGR 74
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
ADLAVHS+KD+P++ P G L I +REDPRDAF+SN Y + LP A+VGT SLRR+
Sbjct: 75 ADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVGTCSLRRQC 134
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+K+ P L+IK LRGN+ TRL+KLD GEY AIILAAAGLKRL L+ RIR P Q LP
Sbjct: 135 QLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSFIEPEQSLP 194
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IE N + + +L PLNH + V+ ERA++ G C++ + ++A++
Sbjct: 195 AVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGCQVPIGSYALLEG 254
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 667
I LRA++ P+G +I+ E+ GP E +G+ AE L +GA EI++
Sbjct: 255 ---DTIWLRALVGEPDGSQIVRGEIRGPRTQAEQLGITLAEQLLSQGAKEILE 304
>sp|A3N700|HEM3_BURP6 Porphobilinogen deaminase OS=Burkholderia pseudomallei (strain 668)
GN=hemC PE=3 SV=1
Length = 329
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 189/263 (71%), Gaps = 3/263 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 20 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELESALA 79
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L A++ REDPRDAF+SNDY SL LP AVVGT+SLR
Sbjct: 80 DGRADLAVHSLKDVPMVLPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVVGTSSLR 139
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ P L ++ LRGN+DTRL KLD+G+YAAIILAAAGLKRL L RIR L +
Sbjct: 140 REAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRALLDVDD 199
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI R ++ L PL+ + S V+AERAVSR GSC++ LAA A+
Sbjct: 200 SLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVPLAAHAV 259
Query: 612 VNNFNESEINLRAIITNPNGLKI 634
+ E++L ++ +G ++
Sbjct: 260 ---WRGGELHLTGSVSTTDGARV 279
>sp|A4JGV4|HEM3_BURVG Porphobilinogen deaminase OS=Burkholderia vietnamiensis (strain G4
/ LMG 22486) GN=hemC PE=3 SV=1
Length = 333
Score = 284 bits (726), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 206/300 (68%), Gaps = 6/300 (2%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAE+VR + +LYP C V+ILG+TT+GD+I ++ K+ KGLF KELE A+
Sbjct: 25 ESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELENALA 84
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L AI+ RED RDAF+SNDY SL LP AVVGT+SLR
Sbjct: 85 DGRADLAVHSLKDVPMALPDGFALAAIMAREDARDAFVSNDYASLDALPAGAVVGTSSLR 144
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R+ ++++ +P L + LRGN+DTRL KLD+G+YAAIILAAAGLKRL L+ RIR L
Sbjct: 145 REAMLRARYPHLNVLPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLEARIRALIDVED 204
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
LPA GQGA+ IEI +R ++ + L PL+ + V+AER VSR GSC++ LAA A+
Sbjct: 205 SLPAAGQGALGIEIAAHRSDVAQWLAPLHDPHTALAVEAERMVSRALGGSCEVPLAAHAV 264
Query: 612 VNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPE---TVGLYAAELLKKKGAIEIIKS 668
+ E+ L ++ +G ++++A+ G + T +G ++ L +GA +I+ +
Sbjct: 265 ---WRAGELYLTGRVSTTDGRRVLSAQACGAVMTAADALALGRAVSDELDAQGARDIVNA 321
>sp|Q21XQ9|HEM3_RHOFD Porphobilinogen deaminase OS=Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118) GN=hemC PE=3 SV=1
Length = 315
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/260 (52%), Positives = 182/260 (70%), Gaps = 5/260 (1%)
Query: 372 EIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAII 431
E RLA+WQAEYV+ + +V +LG+TT GD+I ++ K+ KGLF KELE+A+
Sbjct: 10 ESRLALWQAEYVQDLLTRRG--HQVGLLGMTTLGDQILDRALSKVGGKGLFVKELEVALE 67
Query: 432 KGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLR 491
G+ADLAVHSLKD+PM LP GF L +++REDPRDAF+SN Y +L++LP+ AVVGT+SLR
Sbjct: 68 DGRADLAVHSLKDVPMELPDGFALACVMEREDPRDAFVSNQYANLASLPQGAVVGTSSLR 127
Query: 492 RKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQ 551
R L+++ P L I+ LRGN+DTRL KLD G YAAI+LAAAGLKRL L +RIR F P
Sbjct: 128 RMALLRALRPDLKIEPLRGNLDTRLRKLDDGMYAAIVLAAAGLKRLGLSQRIRATFEPTD 187
Query: 552 ILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAM 611
+LPA GQGA+ IE+ R+++++ L PL H+ + V AERAVSR GSC + LAA+A
Sbjct: 188 MLPAAGQGALGIEVRSQRQDVIDALAPLAHHTTWLAVSAERAVSRAMGGSCSMPLAAYA- 246
Query: 612 VNNFNESEINLRAIITNPNG 631
+ + A +P+G
Sbjct: 247 --TLAADILTIDAAWGDPDG 264
>sp|A6TGI8|HEM3_KLEP7 Porphobilinogen deaminase OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=hemC PE=3
SV=1
Length = 313
Score = 281 bits (719), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/315 (45%), Positives = 203/315 (64%), Gaps = 12/315 (3%)
Query: 354 DKVTVIALREISHGKIGVEIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVP 413
DKV IA R+ LA+WQA+YV+ ++ + +P KVE++ + T+GD I +
Sbjct: 3 DKVLKIATRQSP---------LALWQAQYVKARLEQAHPGLKVELVPMVTRGDVILDTPL 53
Query: 414 LKINEKGLFTKELEMAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDY 473
K+ KGLF KELE+A+++G+AD+AVHS+KD+P+ P G L I +R+DPRDAF+SN Y
Sbjct: 54 AKVGGKGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNRY 113
Query: 474 ISLSTLPKNAVVGTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAG 533
S+ LP +VVGT+SLRR+ + + P L I+SLRGN+ TRL+KLD GEY AIILAAAG
Sbjct: 114 ASIDELPAGSVVGTSSLRRQCQLAATRPDLAIRSLRGNVGTRLSKLDNGEYDAIILAAAG 173
Query: 534 LKRLNLQKRIRMLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERA 593
LKRL L+ RIR SP Q LPA GQGA+ IE + +L PLNH + V+AERA
Sbjct: 174 LKRLQLEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTRGLLAPLNHTETAVRVRAERA 233
Query: 594 VSRNFNGSCKISLAAFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYA 653
++ G C++ + ++A + E+ LRA++ P+G +++ E GP + E +G+
Sbjct: 234 MNTRLEGGCQVPIGSYA---ELKDGELWLRALVGAPDGSQLVRGERRGPAEQAEALGISL 290
Query: 654 AELLKKKGAIEIIKS 668
AE L GA EI+ +
Sbjct: 291 AEELLDNGAREILAA 305
>sp|Q5QUS3|HEM3_IDILO Porphobilinogen deaminase OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=hemC PE=3 SV=1
Length = 313
Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/295 (47%), Positives = 198/295 (67%), Gaps = 3/295 (1%)
Query: 374 RLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKG 433
+LA+WQAE++++++ EL+P VE++ ++TKGD I + KI KGLF KELE+A+++G
Sbjct: 13 KLALWQAEHIQQRLEELHPGLSVELVPMSTKGDVILDTPLAKIGGKGLFVKELEVAMLEG 72
Query: 434 KADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRK 493
+AD+AVHS+KD+P+ P G L I +REDPRDAF+SN+Y +L+ LP+ AVVGT SLRR+
Sbjct: 73 RADIAVHSMKDLPVEFPPGLELHTICEREDPRDAFVSNNYKNLNELPEGAVVGTCSLRRR 132
Query: 494 VLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQIL 553
+K FP L+IK LRGN+ TRL KLD+GE+ AIILAA+GL RL L RI Q L
Sbjct: 133 CQVKEQFPHLVIKDLRGNVQTRLRKLDEGEFDAIILAASGLIRLELGDRITSFIPVEQSL 192
Query: 554 PAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVN 613
PA GQGA+ IE + E+ +L PL + V AERA++R +G C++ + A+A +
Sbjct: 193 PANGQGALGIECRSDDDEMKALLAPLQCQETRTRVLAERAMNRGLDGGCQVPIGAYAELE 252
Query: 614 NFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
E+ LR ++ P+G K++ EV GP E +G AE L K+GA EI+ +
Sbjct: 253 G---DEVYLRGLVGEPDGGKVLRDEVRGPASKAEELGSELAERLLKQGAAEILSA 304
>sp|A8G848|HEM3_SERP5 Porphobilinogen deaminase OS=Serratia proteamaculans (strain 568)
GN=hemC PE=3 SV=1
Length = 313
Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 207/314 (65%), Gaps = 12/314 (3%)
Query: 354 DKVTVIALREISHGKIGVEIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVP 413
DK+ IA R+ LA+WQA YV+++++ +P +VE++ + TKGD I +
Sbjct: 3 DKIIRIATRQSP---------LALWQAHYVQQRLMANHPGLQVELVPMVTKGDIILDTPL 53
Query: 414 LKINEKGLFTKELEMAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDY 473
K+ KGLF KELE+A++ G+AD+AVHS+KD+P++ P+G L I +R+DPRDAF+SN +
Sbjct: 54 AKVGGKGLFVKELELALLDGRADIAVHSMKDVPVDFPAGLGLVTICERDDPRDAFVSNRF 113
Query: 474 ISLSTLPKNAVVGTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAG 533
SL LP+ +VVGT+SLRR+ ++ P LI++ LRGN+ TRL+KLD G+Y AIILA AG
Sbjct: 114 TSLDQLPQGSVVGTSSLRRQCQLRERRPDLIVRDLRGNVGTRLSKLDNGDYDAIILAVAG 173
Query: 534 LKRLNLQKRIRMLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERA 593
LKRL L++RIR SP + LPA GQGA+ IE + + +L PLNH +E V+AERA
Sbjct: 174 LKRLGLEQRIRSPLSPEECLPAVGQGAVGIECRLDDETTRALLAPLNHAVTETRVRAERA 233
Query: 594 VSRNFNGSCKISLAAFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYA 653
++ G C++ + ++A + + LRA++ +P+G +++ E GP E +G+
Sbjct: 234 MNTRLEGGCQVPIGSYA---ELDGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGIEL 290
Query: 654 AELLKKKGAIEIIK 667
AE L +GA EI++
Sbjct: 291 AEELLAQGAREILQ 304
>sp|B5XYL1|HEM3_KLEP3 Porphobilinogen deaminase OS=Klebsiella pneumoniae (strain 342)
GN=hemC PE=3 SV=1
Length = 313
Score = 280 bits (715), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/315 (44%), Positives = 204/315 (64%), Gaps = 12/315 (3%)
Query: 354 DKVTVIALREISHGKIGVEIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVP 413
DKV IA R+ LA+WQA+YV+ ++ + +P VE++ + T+GD I +
Sbjct: 3 DKVLKIATRQSP---------LALWQAQYVKARLEQAHPGLNVELVPMVTRGDVILDTPL 53
Query: 414 LKINEKGLFTKELEMAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDY 473
K+ KGLF KELE+A+++G+AD+AVHS+KD+P+ P G L I +R+DPRDAF+SN Y
Sbjct: 54 AKVGGKGLFVKELELAMLEGRADIAVHSMKDVPVEFPEGLGLVTICERDDPRDAFVSNHY 113
Query: 474 ISLSTLPKNAVVGTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAG 533
S+ LP +VVGT+SLRR+ + + P L+I+SLRGN+ TRL+KLD GEY AIILAAAG
Sbjct: 114 ASIDELPAGSVVGTSSLRRQCQLAATRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAAAG 173
Query: 534 LKRLNLQKRIRMLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERA 593
LKRL L+ RIR SP Q LPA GQGA+ IE + +L PLNH + V+AERA
Sbjct: 174 LKRLKLEARIRQPLSPEQSLPAVGQGAVGIECRLDDAWTQALLAPLNHAETAVRVRAERA 233
Query: 594 VSRNFNGSCKISLAAFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYA 653
++ G C++ + ++A + N E+ LRA++ P+G +++ E GP + E +G+
Sbjct: 234 MNTRLEGGCQVPIGSYAELVN---GELWLRALVGAPDGSQMVRGERRGPAEQAEALGISL 290
Query: 654 AELLKKKGAIEIIKS 668
AE L GA +I+ +
Sbjct: 291 AEELLDNGARDILAA 305
>sp|Q0VM28|HEM3_ALCBS Porphobilinogen deaminase OS=Alcanivorax borkumensis (strain SK2 /
ATCC 700651 / DSM 11573) GN=hemC PE=3 SV=1
Length = 310
Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/294 (46%), Positives = 196/294 (66%), Gaps = 3/294 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LAIWQAEYV++++ L+ +VE++ I T+GDKI + KI KGLF KELE A++ G+
Sbjct: 15 LAIWQAEYVQQRLESLHEGLRVELVRIKTQGDKILDTPLAKIGGKGLFVKELEEAMMDGR 74
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
AD+AVHS+KD+PM LP GF L I +REDPRDAF+SN + LS+LP A VGT+SLRR+
Sbjct: 75 ADIAVHSMKDVPMELPPGFALPVICEREDPRDAFVSNTFDGLSSLPHGACVGTSSLRRQA 134
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+K+ P L++ SLRGN+ TRL KLD G + AIILAAAGLKRL + RIR P + LP
Sbjct: 135 QVKANRPDLVVNSLRGNVQTRLGKLDAGNFDAIILAAAGLKRLEMHDRIRYEMPPEESLP 194
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IE + + +E+L PL+ + V AERA++R G C++ +A FA++ +
Sbjct: 195 AVGQGAVGIECREGDESTIELLSPLSDVDTWDRVVAERAMNRRLEGGCQVPIAGFALLED 254
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
++ LR ++ +G +++ AE P +G+ AE L +GA EI+K+
Sbjct: 255 ---GQLWLRGLVAEEDGSRVLRAEGTAPRGQGAELGIDIAEQLLAQGADEILKA 305
>sp|A7MXU9|HEM3_VIBHB Porphobilinogen deaminase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=hemC PE=3 SV=1
Length = 312
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 135/292 (46%), Positives = 197/292 (67%), Gaps = 3/292 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQA +V+ + +P +VE++ + TKGD I + K+ KGLF KELE+A+++G+
Sbjct: 16 LALWQAHFVKDALQAAHPGLEVELVTMVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGR 75
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
ADLAVHS+KD+P++ P G L I +REDPRDAF+SN Y ++ LP+ AVVGT SLRR+
Sbjct: 76 ADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVGTCSLRRQC 135
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+K + P L+IK LRGN+ TRL KLD GEY AIILAAAGLKRL L++RIR P Q LP
Sbjct: 136 QLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIRSFIEPEQSLP 195
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IE + + L+++L PLNH + V+ ERA++ G C++ + ++++++
Sbjct: 196 AVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLEGGCQVPIGSYSLLDG 255
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 666
N I LRA++ P+G I+ E+ G + E +G+ A L + GA +I+
Sbjct: 256 DN---IWLRALVGEPDGSLIVRGEIRGHRNDAEALGVQLANELLENGARDIL 304
>sp|Q87KI9|HEM3_VIBPA Porphobilinogen deaminase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=hemC PE=3 SV=1
Length = 312
Score = 276 bits (705), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 137/292 (46%), Positives = 194/292 (66%), Gaps = 3/292 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQA +V+ + +P +VE++ + TKGD I + K+ KGLF KELE+A+++G+
Sbjct: 16 LALWQAHFVKDALQAAHPGLEVELVTMVTKGDVILDTPLAKVGGKGLFVKELEVAMLEGR 75
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
ADLAVHS+KD+P++ P G L I +REDPRDAF+SN Y +++ LP+ AVVGT SLRR+
Sbjct: 76 ADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNINELPQGAVVGTCSLRRQC 135
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+K + P +IIK LRGN+ TRL KLD GEY AIILAAAGLKRL L+ RIR P Q LP
Sbjct: 136 QLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEDRIRSFIEPEQSLP 195
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IE + + L+++L PLNH + V ERA++ G C++ + ++A++
Sbjct: 196 AVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLEGGCQVPIGSYALLEG 255
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 666
EI LRA++ P+G +I+ EV G E +G+ A L GA +I+
Sbjct: 256 ---DEIWLRALVGEPDGSEIVRGEVRGHRKDGEALGIQLANELLDSGARDIL 304
>sp|Q602K3|HEM3_METCA Porphobilinogen deaminase OS=Methylococcus capsulatus (strain ATCC
33009 / NCIMB 11132 / Bath) GN=hemC PE=3 SV=2
Length = 322
Score = 276 bits (705), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 135/293 (46%), Positives = 192/293 (65%), Gaps = 3/293 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQAEYV ++ +P +VE++G+TT+GDK+ + K+ KGLF KELE +++G+
Sbjct: 27 LALWQAEYVASRLRAAHPDLRVELVGMTTRGDKLLDAPLAKVGGKGLFVKELEQGLLEGR 86
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
AD+AVHS+KD+P+ P G L AIL+REDPRDA +S+ Y S + LP +A +GT+SLRR+
Sbjct: 87 ADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPADARIGTSSLRRQC 146
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
IK P + LRGN++TRL KLD GE+ AI+LA+AGLKRL Q+RI +P Q LP
Sbjct: 147 QIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGFQERIAETLTPEQCLP 206
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGAI +E +L+PL+H + V AERA++R +G C++ +A FA +
Sbjct: 207 AIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLDGGCQVPIAGFAQLEG 266
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 667
++LR ++ NP+G II AE G T E +G AE L +GA EI++
Sbjct: 267 ---DTLSLRGLVGNPDGSGIIRAEAVGHPSTFEALGKRVAEHLLDQGADEILR 316
>sp|Q31JG5|HEM3_THICR Porphobilinogen deaminase OS=Thiomicrospira crunogena (strain
XCL-2) GN=hemC PE=3 SV=1
Length = 309
Score = 275 bits (704), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 197/294 (67%), Gaps = 5/294 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPL-KINEKGLFTKELEMAIIKG 433
LA+WQAE+V+ ++ + + VE+L ++TKGDKI + VPL KI KGLFTKELE ++ G
Sbjct: 14 LAMWQAEFVKAELEKHHEGLTVELLPMSTKGDKILD-VPLAKIGGKGLFTKELEDRMLAG 72
Query: 434 KADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRK 493
+AD+AVHS+KD+PM LP GF L AIL+R +P DAF+SNDY LP+ AV+GT+SLRRK
Sbjct: 73 EADIAVHSMKDVPMVLPEGFALGAILERHEPTDAFVSNDYAHFEELPQGAVLGTSSLRRK 132
Query: 494 VLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQIL 553
+ + P L++K LRGN+ TRL KLD G+Y AI+LA +GLKRL L +RIR SP L
Sbjct: 133 AQLMAARPDLVVKDLRGNVGTRLGKLDAGDYDAIVLATSGLKRLELDERIRHELSPETCL 192
Query: 554 PAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVN 613
PA QG + IE + E++E++ LNH +E AERA++ G C++ + +A
Sbjct: 193 PAVSQGTLGIEYFEKDPEVLELIQVLNHRDTEIRTLAERAMNHRLEGGCQVPIGVYA--- 249
Query: 614 NFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIK 667
+ +I LR ++ +G +I+ +E G PET+G+Y AE L ++GA EI+K
Sbjct: 250 ELEDDQIYLRGLVGALDGSEILRSEARGSQKDPETLGVYVAEQLLEQGAGEILK 303
>sp|Q1GXA1|HEM3_METFK Porphobilinogen deaminase OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=hemC PE=3 SV=1
Length = 310
Score = 275 bits (702), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/314 (47%), Positives = 208/314 (66%), Gaps = 12/314 (3%)
Query: 355 KVTVIALREISHGKIGVEIRLAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPL 414
K VIA RE + LA+WQA+Y++ ++ LYP +V ILG+TT GD+I +
Sbjct: 5 KTLVIASRESA---------LAMWQAQYIQGRLQTLYPETEVTILGMTTTGDQILDSPLA 55
Query: 415 KINEKGLFTKELEMAIIKGKADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYI 474
+I KGLF KELE A+ G+ADLAVHS+KD+PM+LP GF L AI +R+DPRDAF+SNDY
Sbjct: 56 RIGGKGLFVKELEQALADGRADLAVHSMKDVPMHLPPGFALAAISERDDPRDAFVSNDYP 115
Query: 475 SLSTLPKNAVVGTNSLRRKVLIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGL 534
+L++LP ++VGT+SLRR+ +++ FP L ++SLRGN+ TRL KLD+G+YAAIILAAAGL
Sbjct: 116 NLASLPAGSIVGTSSLRRQSQLQARFPGLKVESLRGNLQTRLRKLDEGQYAAIILAAAGL 175
Query: 535 KRLNLQKRIRMLFSPNQILPAPGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAV 594
KRL L RIR P+ +PA GQGA+ IEI R +L+++L PLNH + V+AER +
Sbjct: 176 KRLGLASRIRESIDPDNSIPAVGQGALGIEINAERLDLLKVLAPLNHPETAACVEAERGM 235
Query: 595 SRNFNGSCKISLAAFAMVNNFNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAA 654
SR GSC++ L AFA + + + + + +G + + V GP + PE +G A
Sbjct: 236 SRALAGSCQVPLGAFAQQHG---DTLQMTGFVASIDGKEFLRESVQGPAEQPEALGQALA 292
Query: 655 ELLKKKGAIEIIKS 668
L GA I+ +
Sbjct: 293 AKLVALGADRILAA 306
>sp|C6DHC2|HEM3_PECCP Porphobilinogen deaminase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=hemC PE=3 SV=1
Length = 313
Score = 275 bits (702), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 194/294 (65%), Gaps = 3/294 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQA YV++ + LYP VE++ + T+GD I + K+ KGLF KELE+A+++G+
Sbjct: 15 LALWQARYVQQCLNHLYPDLHVELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLEGR 74
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
AD+AVHS+KD+P+ P G L I +R+DPRDAF+SN Y SL LP+ + VGT+SLRR+
Sbjct: 75 ADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQLPEGSCVGTSSLRRQC 134
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+++ P L+I+ LRGN+ TRL KLD GEY AIILA AGLKRL L++RIR SP + LP
Sbjct: 135 QLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLGLEERIRCALSPEESLP 194
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGAI IE N + ++L PLNH + V+AERA++ G C++ + ++A
Sbjct: 195 AVGQGAIGIECRLNDDRIRQLLAPLNHPATAARVQAERAMNVRLEGGCQVPIGSYA---E 251
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
+ LRA++ P+G ++I E G + E +G+ AE L KGA I+++
Sbjct: 252 LEGDTLWLRALVGAPDGSQMIVGERRGNVSDAEQIGIALAEELLAKGASAILQA 305
>sp|Q2SQ70|HEM3_HAHCH Porphobilinogen deaminase OS=Hahella chejuensis (strain KCTC 2396)
GN=hemC PE=3 SV=1
Length = 311
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 194/294 (65%), Gaps = 3/294 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQAE+V++++ L+P VE+LG+TTKGD I + K+ KGLF KELE A+++G+
Sbjct: 15 LALWQAEHVKQRLEALHPGLTVELLGLTTKGDIILDTPLAKVGGKGLFVKELETAMLEGR 74
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
AD+AVHS+KD+PM P G L AIL+RE P DAF+SN Y SL LP+ AVVGT+SLRR+
Sbjct: 75 ADIAVHSMKDVPMEFPPGLGLGAILERETPMDAFVSNQYASLDELPEGAVVGTSSLRRQC 134
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+ P L I SLRGN++TRL KLD G++ AIILAA+GLKRL RIR +P LP
Sbjct: 135 QLSERRPDLKILSLRGNVNTRLAKLDAGDFDAIILAASGLKRLGFSGRIREELTPEVSLP 194
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IE + E M ++ L + V AERA++ G C++ +A +A +
Sbjct: 195 AVGQGALGIECRLDDPEAMALIAQLQDAETTARVSAERAMNHRLQGGCQVPIAGYAEITG 254
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
++ LR ++ +P+G +++ EV GP+ E +G AE L ++GA +I+++
Sbjct: 255 ---DQMRLRGLVGSPDGAQVLRDEVEGPVAAAEALGTELAERLLQQGAGKILEA 305
>sp|B7VMD9|HEM3_VIBSL Porphobilinogen deaminase OS=Vibrio splendidus (strain LGP32)
GN=hemC PE=3 SV=1
Length = 312
Score = 272 bits (695), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 135/292 (46%), Positives = 195/292 (66%), Gaps = 3/292 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQA +VR + +P +VE++ + TKGD I + K+ KGLF KELE+A+++G+
Sbjct: 16 LALWQAYFVRDALQAAHPGLEVELVTMVTKGDIILDTPLAKVGGKGLFVKELEVAMLEGR 75
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
ADLAVHS+KD+P++ P G L I +REDPRDAF+SN Y ++ LP+ AVVGT SLRR+
Sbjct: 76 ADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVGTCSLRRQC 135
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+ + P LIIK LRGN+ TRL KLD G+Y AI+LAAAGLKRL L++RIR P Q LP
Sbjct: 136 QLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEERIRSFIEPEQSLP 195
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IE + + L+++L PLNH + V ERA++ G C++ + ++++++
Sbjct: 196 AVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGCQVPIGSYSLLDG 255
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 666
N I LRA++ P+G K++ E++G E +G+ A L GA EI+
Sbjct: 256 DN---IWLRALVGEPDGSKMVRGEISGLRKDAEALGVTLANQLLDDGAREIL 304
>sp|Q65VX7|HEM3_MANSM Porphobilinogen deaminase OS=Mannheimia succiniciproducens (strain
MBEL55E) GN=hemC PE=3 SV=1
Length = 310
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 193/294 (65%), Gaps = 3/294 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQA YV+ ++ LYP +VE++ + TKGD I + KI KGLF KELE A++ +
Sbjct: 16 LALWQANYVKDRLTALYPDLQVELVTMVTKGDVILDTPLAKIGGKGLFVKELEHALLNHE 75
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
AD+AVHS+KD+PM P G L I KREDPRDAF+SN Y SL+ LP+ A+VGT+SLRR+
Sbjct: 76 ADIAVHSMKDVPMEFPQGLGLSVICKREDPRDAFVSNKYRSLAELPQGAIVGTSSLRRQC 135
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+KS P L I+SLRGN+ TRL+KLD G+Y AIILA+AGL RL + +RI + LP
Sbjct: 136 QLKSLRPDLDIRSLRGNVGTRLSKLDNGDYDAIILASAGLIRLGMAERIASFIETDISLP 195
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IE + + + +L PL H + V AERA++ G C++ + FA V N
Sbjct: 196 AAGQGAVGIECRVDDELVQSLLAPLAHQETTICVLAERAMNNRLQGGCQVPIGGFAQVKN 255
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
E+ LRA++ +G +II AE ++ E +G+ AE L ++GA +I+KS
Sbjct: 256 ---GEVFLRALVGATDGSQIIRAEGKSAVENAEVLGVQIAEDLLQQGADKILKS 306
>sp|A8GZG4|HEM3_SHEPA Porphobilinogen deaminase OS=Shewanella pealeana (strain ATCC
700345 / ANG-SQ1) GN=hemC PE=3 SV=1
Length = 310
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 195/294 (66%), Gaps = 3/294 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQAE+V+ ++ +++ VE+L ++TKGD I + K+ KGLF KELE+A+++G
Sbjct: 15 LAMWQAEFVKAELEKIHEGLTVELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLEGL 74
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
AD+AVHS+KD+P++ P G L I +REDPRDAF+SN Y ++ LP+ AVVGT+SLRR+
Sbjct: 75 ADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKTIEDLPQGAVVGTSSLRRQC 134
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
I++ P L+IK LRGN+ TRL KLD G Y AIILAAAGLKRL L++RI S Q LP
Sbjct: 135 QIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEERIASFISAEQSLP 194
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IE + + +L PL H + V AERA++ G C++ + A+A ++
Sbjct: 195 ANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRLEGGCQVPIGAYAEIDG 254
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
++LR ++ NP+G +IITA +G E +G+ AE L KGA I+ +
Sbjct: 255 ---DTLSLRGLVGNPDGSQIITASSSGSTADAEKLGVALAEELLSKGAKTILDA 305
>sp|B0TJ54|HEM3_SHEHH Porphobilinogen deaminase OS=Shewanella halifaxensis (strain
HAW-EB4) GN=hemC PE=3 SV=1
Length = 310
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 195/294 (66%), Gaps = 3/294 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQAE+V+ ++ +++ VE+L ++TKGD I + K+ KGLF KELE+A+++GK
Sbjct: 15 LAMWQAEFVKAELEKIHEGLTVELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLEGK 74
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
AD+AVHS+KD+P+ P G L I +REDPRDAF+SN Y ++ LP+ AVVGT+SLRR+
Sbjct: 75 ADIAVHSMKDVPVEFPEGLGLEVICEREDPRDAFVSNTYKTIEDLPQGAVVGTSSLRRQC 134
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
I++ P L+IK LRGN+ TRL KLD G Y AIILAAAGLKRL L++RI S Q LP
Sbjct: 135 QIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEERIASFISAEQSLP 194
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGA+ IE + + +L PL H + V AERA++ G C++ + A+A ++
Sbjct: 195 ANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRLEGGCQVPIGAYAEIDG 254
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
++LR ++ NP+G +IITA +G E +G+ AE L KGA I+ +
Sbjct: 255 ---DTLSLRGLVGNPDGSQIITAASSGNKADAEKLGVALAEELLAKGAKTILDA 305
>sp|Q6CZG3|HEM3_ERWCT Porphobilinogen deaminase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=hemC PE=3 SV=1
Length = 313
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/294 (45%), Positives = 192/294 (65%), Gaps = 3/294 (1%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQA YV++ + YP VE++ + T+GD I + K+ KGLF KELE+A+++G+
Sbjct: 15 LALWQARYVQQCLNHFYPDLHVELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLEGR 74
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
AD+AVHS+KD+P+ P G L I +R+DPRDAF+SN Y SL LP+ + VGT+SLRR+
Sbjct: 75 ADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQLPEGSCVGTSSLRRQC 134
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
+++ P L+I+ LRGN+ TRL KLD GEY AIILA AGLKRL L++RIR SP + LP
Sbjct: 135 QLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLGLEERIRCALSPEESLP 194
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGAI IE + + ++L PLNH + V AERA++ G C++ + ++A
Sbjct: 195 AVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRLEGGCQVPIGSYA---E 251
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEIIKS 668
+ LRA++ P+G ++I E G + E +G+ AE L KGA I+++
Sbjct: 252 LEGDTLWLRALVGAPDGSQMIVGERKGSVSDAEKIGVALAEELLAKGASAILQA 305
>sp|B8GSU8|HEM3_THISH Porphobilinogen deaminase OS=Thioalkalivibrio sp. (strain HL-EbGR7)
GN=hemC PE=3 SV=1
Length = 316
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/292 (46%), Positives = 193/292 (66%), Gaps = 2/292 (0%)
Query: 375 LAIWQAEYVRKKIIELYPWCKVEILGITTKGDKIFEKVPLKINEKGLFTKELEMAIIKGK 434
LA+WQAE+V + +P +VE++G+TT+GD+I + K+ KGLF KELE +++G+
Sbjct: 15 LAVWQAEHVAALVKARHPGVRVELVGMTTQGDRILDTPLAKVGGKGLFVKELETGLLEGR 74
Query: 435 ADLAVHSLKDIPMNLPSGFILCAILKREDPRDAFISNDYISLSTLPKNAVVGTNSLRRKV 494
AD+AVHS+KD+PM LP G L IL REDPRDAF+SN + SL LP++A VGT+SLRR+
Sbjct: 75 ADIAVHSMKDVPMELPEGLCLPVILDREDPRDAFVSNTFKSLDELPRDARVGTSSLRRQC 134
Query: 495 LIKSFFPSLIIKSLRGNIDTRLNKLDKGEYAAIILAAAGLKRLNLQKRIRMLFSPNQILP 554
++ P I LRGN++TRL KLD GE+ AIILAAAGLKRL + RI +P Q LP
Sbjct: 135 QLRHDHPHFQILDLRGNVNTRLAKLDAGEFDAIILAAAGLKRLGFEVRIASEITPEQSLP 194
Query: 555 APGQGAIAIEILDNRKELMEMLIPLNHYFSEQTVKAERAVSRNFNGSCKISLAAFAMVNN 614
A GQGAI IE +N E+M ++ L+ + V AERA++ NG C++ +A +A + +
Sbjct: 195 AIGQGAIGIECRENDPEVMALIGSLDDPDTHVRVAAERAMNARLNGGCQVPIAGYAELTD 254
Query: 615 FNESEINLRAIITNPNGLKIITAEVNGPIDTPETVGLYAAELLKKKGAIEII 666
+ + LR ++ P+G I+ AE++GP E +G A+LL +GA I+
Sbjct: 255 AD--TLRLRGLVGEPDGSLILRAELSGPRAEAEALGRAVADLLLHEGAGPIL 304
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,382,432
Number of Sequences: 539616
Number of extensions: 10510732
Number of successful extensions: 36857
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 250
Number of HSP's that attempted gapping in prelim test: 34353
Number of HSP's gapped (non-prelim): 1646
length of query: 672
length of database: 191,569,459
effective HSP length: 124
effective length of query: 548
effective length of database: 124,657,075
effective search space: 68312077100
effective search space used: 68312077100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)